locus-tag class description FY142_00005 PF00308 Bacterial dnaA protein FY142_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY142_00005 PF11638 DnaA N-terminal domain FY142_00010 PF06969 HemN C-terminal domain FY142_00010 PF04055 Radical SAM superfamily FY142_00015 PF01725 Ham1 family FY142_00020 PF01138 3' exoribonuclease family, domain 1 FY142_00020 PF03725 3' exoribonuclease family, domain 2 FY142_00025 PF01628 HrcA protein C terminal domain FY142_00030 PF01025 GrpE FY142_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY142_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY142_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY142_00045 PF04552 Sigma-54, DNA binding domain FY142_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY142_00045 PF04963 Sigma-54 factor, core binding domain FY142_00050 PF00005 ABC transporter FY142_00055 PF03968 OstA-like protein FY142_00065 PF01343 Peptidase family S49 FY142_00070 PF00216 Bacterial DNA-binding protein FY142_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY142_00080 PF17785 PUA-like domain FY142_00085 PF00588 SpoU rRNA Methylase family FY142_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY142_00090 PF01252 Signal peptidase (SPase) II FY142_00095 PF00072 Response regulator receiver domain FY142_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY142_00095 PF01627 Hpt domain FY142_00095 PF00672 HAMP domain FY142_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_00095 PF00512 His Kinase A (phospho-acceptor) domain FY142_00105 PF01624 MutS domain I FY142_00105 PF05188 MutS domain II FY142_00105 PF05192 MutS domain III FY142_00105 PF05190 MutS family domain IV FY142_00105 PF00488 MutS domain V FY142_00110 PF01842 ACT domain FY142_00110 PF08335 GlnD PII-uridylyltransferase FY142_00110 PF01966 HD domain FY142_00110 PF01909 Nucleotidyltransferase domain FY142_00115 PF03023 Lipid II flippase MurJ FY142_00125 PF00579 tRNA synthetases class I (W and Y) FY142_00135 PF01106 NifU-like domain FY142_00140 PF00814 Glycoprotease family FY142_00150 PF01475 Ferric uptake regulator family FY142_00155 PF01553 Acyltransferase FY142_00160 PF04055 Radical SAM superfamily FY142_00160 PF01938 TRAM domain FY142_00160 PF00919 Uncharacterized protein family UPF0004 FY142_00165 PF02562 PhoH-like protein FY142_00170 PF02130 Uncharacterized protein family UPF0054 FY142_00175 PF03471 Transporter associated domain FY142_00175 PF00571 CBS domain FY142_00180 PF00795 Carbon-nitrogen hydrolase FY142_00185 PF01381 Helix-turn-helix FY142_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY142_00190 PF02772 S-adenosylmethionine synthetase, central domain FY142_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY142_00195 PF02390 Putative methyltransferase FY142_00200 PF00294 pfkB family carbohydrate kinase FY142_00205 PF02646 RmuC family FY142_00210 PF01327 Polypeptide deformylase FY142_00215 PF02911 Formyl transferase, C-terminal domain FY142_00215 PF00551 Formyl transferase FY142_00220 PF01416 tRNA pseudouridine synthase FY142_00230 PF07687 Peptidase dimerisation domain FY142_00230 PF01546 Peptidase family M20/M25/M40 FY142_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY142_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY142_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_00245 PF00672 HAMP domain FY142_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY142_00255 PF00011 Hsp20/alpha crystallin family FY142_00280 PF00696 Amino acid kinase family FY142_00290 PF01926 50S ribosome-binding GTPase FY142_00295 PF14849 YidC periplasmic domain FY142_00295 PF02096 60Kd inner membrane protein FY142_00300 PF00825 Ribonuclease P FY142_00305 PF00468 Ribosomal protein L34 FY142_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_00310 PF00672 HAMP domain FY142_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_00315 PF00512 His Kinase A (phospho-acceptor) domain FY142_00325 PF01209 ubiE/COQ5 methyltransferase family FY142_00330 PF00005 ABC transporter FY142_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY142_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY142_00350 PF00149 Calcineurin-like phosphoesterase FY142_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY142_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY142_00365 PF05544 Proline racemase FY142_00370 PF01979 Amidohydrolase family FY142_00375 PF00156 Phosphoribosyl transferase domain FY142_00380 PF00294 pfkB family carbohydrate kinase FY142_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY142_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY142_00400 PF00342 Phosphoglucose isomerase FY142_00405 PF00501 AMP-binding enzyme FY142_00405 PF13193 AMP-binding enzyme C-terminal domain FY142_00410 PF00005 ABC transporter FY142_00410 PF08402 TOBE domain FY142_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY142_00425 PF00593 TonB dependent receptor FY142_00425 PF07715 TonB-dependent Receptor Plug Domain FY142_00445 PF01679 Proteolipid membrane potential modulator FY142_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY142_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_00475 PF00512 His Kinase A (phospho-acceptor) domain FY142_00475 PF16736 Single Cache-like FY142_00475 PF00989 PAS fold FY142_00480 PF12849 PBP superfamily domain FY142_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY142_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY142_00495 PF00005 ABC transporter FY142_00500 PF01895 PhoU domain FY142_00505 PF00072 Response regulator receiver domain FY142_00505 PF00486 Transcriptional regulatory protein, C terminal FY142_00515 PF00202 Aminotransferase class-III FY142_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY142_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY142_00525 PF01430 Hsp33 protein FY142_00530 PF04379 ApaG domain FY142_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY142_00545 PF00692 dUTPase FY142_00555 PF00589 Phage integrase family FY142_00555 PF13356 Arm DNA-binding domain FY142_00565 PF00239 Resolvase, N terminal domain FY142_00565 PF02796 Helix-turn-helix domain of resolvase FY142_00580 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FY142_00600 PF08671 Anti-repressor SinI FY142_00600 PF01381 Helix-turn-helix FY142_00640 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY142_00645 PF00230 Major intrinsic protein FY142_00685 PF00196 Bacterial regulatory proteins, luxR family FY142_00685 PF00072 Response regulator receiver domain FY142_00695 PF01180 Dihydroorotate dehydrogenase FY142_00730 PF02082 Transcriptional regulator FY142_00735 PF00270 DEAD/DEAH box helicase FY142_00735 PF08494 DEAD/H associated FY142_00735 PF00271 Helicase conserved C-terminal domain FY142_00755 PF01925 Sulfite exporter TauE/SafE FY142_00765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_00765 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY142_00765 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_00765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_00770 PF02803 Thiolase, C-terminal domain FY142_00770 PF00108 Thiolase, N-terminal domain FY142_00775 PF00378 Enoyl-CoA hydratase/isomerase FY142_00775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY142_00775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY142_00800 PF03334 Na+/H+ antiporter subunit FY142_00805 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY142_00810 PF01899 Na+/H+ ion antiporter subunit FY142_00815 PF00361 Proton-conducting membrane transporter FY142_00820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY142_00825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY142_00825 PF00361 Proton-conducting membrane transporter FY142_00825 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY142_00825 PF13244 Domain of unknown function (DUF4040) FY142_00835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_00845 PF00072 Response regulator receiver domain FY142_00850 PF01584 CheW-like domain FY142_00850 PF02895 Signal transducing histidine kinase, homodimeric domain FY142_00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_00850 PF01627 Hpt domain FY142_00855 PF01739 CheR methyltransferase, SAM binding domain FY142_00855 PF03705 CheR methyltransferase, all-alpha domain FY142_00860 PF01339 CheB methylesterase FY142_00860 PF00072 Response regulator receiver domain FY142_00865 PF00072 Response regulator receiver domain FY142_00870 PF03975 CheD chemotactic sensory transduction FY142_00880 PF08345 Flagellar M-ring protein C-terminal FY142_00880 PF01514 Secretory protein of YscJ/FliF family FY142_00885 PF03472 Autoinducer binding domain FY142_00885 PF00196 Bacterial regulatory proteins, luxR family FY142_00895 PF00672 HAMP domain FY142_00895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_00900 PF00672 HAMP domain FY142_00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_00900 PF00512 His Kinase A (phospho-acceptor) domain FY142_00900 PF01627 Hpt domain FY142_00900 PF00072 Response regulator receiver domain FY142_00905 PF01741 Large-conductance mechanosensitive channel, MscL FY142_00910 PF00155 Aminotransferase class I and II FY142_00915 PF01370 NAD dependent epimerase/dehydratase family FY142_00925 PF03884 DNA gyrase inhibitor YacG FY142_00930 PF02545 Maf-like protein FY142_00935 PF01176 Translation initiation factor 1A / IF-1 FY142_00945 PF06793 Uncharacterised protein family (UPF0262) FY142_00950 PF00815 Histidinol dehydrogenase FY142_00960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY142_00975 PF00700 Bacterial flagellin C-terminal helical region FY142_00975 PF00669 Bacterial flagellin N-terminal helical region FY142_00980 PF00700 Bacterial flagellin C-terminal helical region FY142_00980 PF00669 Bacterial flagellin N-terminal helical region FY142_00985 PF00669 Bacterial flagellin N-terminal helical region FY142_00985 PF00700 Bacterial flagellin C-terminal helical region FY142_00990 PF00813 FliP family FY142_01000 PF02107 Flagellar L-ring protein FY142_01010 PF02119 Flagellar P-ring protein FY142_01015 PF13144 Chaperone for flagella basal body P-ring formation FY142_01020 PF00460 Flagella basal body rod protein FY142_01020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY142_01025 PF02049 Flagellar hook-basal body complex protein FliE FY142_01030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY142_01035 PF00460 Flagella basal body rod protein FY142_01045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY142_01045 PF18269 T3SS EscN ATPase C-terminal domain FY142_01050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY142_01050 PF00460 Flagella basal body rod protein FY142_01060 PF01618 MotA/TolQ/ExbB proton channel family FY142_01065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY142_01070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY142_01075 PF01706 FliG C-terminal domain FY142_01075 PF14841 FliG middle domain FY142_01075 PF14842 FliG N-terminal domain FY142_01080 PF01312 FlhB HrpN YscU SpaS Family FY142_01090 PF00669 Bacterial flagellin N-terminal helical region FY142_01090 PF00700 Bacterial flagellin C-terminal helical region FY142_01100 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY142_01100 PF00691 OmpA family FY142_01110 PF02120 Flagellar hook-length control protein FliK FY142_01120 PF00486 Transcriptional regulatory protein, C terminal FY142_01125 PF07559 Flagellar basal body protein FlaE FY142_01125 PF00460 Flagella basal body rod protein FY142_01125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY142_01145 PF07378 Flagellar protein FlbT FY142_01150 PF03963 Flagellar hook capping protein - N-terminal region FY142_01155 PF01313 Bacterial export proteins, family 3 FY142_01160 PF00771 FHIPEP family FY142_01165 PF01311 Bacterial export proteins, family 1 FY142_01200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY142_01200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY142_01205 PF00356 Bacterial regulatory proteins, lacI family FY142_01210 PF01547 Bacterial extracellular solute-binding protein FY142_01215 PF00528 Binding-protein-dependent transport system inner membrane component FY142_01220 PF00528 Binding-protein-dependent transport system inner membrane component FY142_01225 PF00128 Alpha amylase, catalytic domain FY142_01230 PF03459 TOBE domain FY142_01230 PF17912 MalK OB fold domain FY142_01230 PF00005 ABC transporter FY142_01245 PF00920 Dehydratase family FY142_01250 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY142_01255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY142_01255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY142_01260 PF01266 FAD dependent oxidoreductase FY142_01265 PF00120 Glutamine synthetase, catalytic domain FY142_01290 PF00463 Isocitrate lyase family FY142_01295 PF09856 Predicted transcriptional regulator (DUF2083) FY142_01295 PF06114 IrrE N-terminal-like domain FY142_01295 PF01381 Helix-turn-helix FY142_01300 PF13416 Bacterial extracellular solute-binding protein FY142_01305 PF08402 TOBE domain FY142_01305 PF00005 ABC transporter FY142_01310 PF00528 Binding-protein-dependent transport system inner membrane component FY142_01315 PF00528 Binding-protein-dependent transport system inner membrane component FY142_01330 PF13188 PAS domain FY142_01330 PF13426 PAS domain FY142_01330 PF00512 His Kinase A (phospho-acceptor) domain FY142_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_01330 PF00989 PAS fold FY142_01340 PF02541 Ppx/GppA phosphatase family FY142_01345 PF01728 FtsJ-like methyltransferase FY142_01350 PF07690 Major Facilitator Superfamily FY142_01355 PF00753 Metallo-beta-lactamase superfamily FY142_01360 PF00571 CBS domain FY142_01360 PF00478 IMP dehydrogenase / GMP reductase domain FY142_01370 PF08240 Alcohol dehydrogenase GroES-like domain FY142_01370 PF00107 Zinc-binding dehydrogenase FY142_01375 PF01738 Dienelactone hydrolase family FY142_01380 PF00994 Probable molybdopterin binding domain FY142_01385 PF08544 GHMP kinases C terminal FY142_01385 PF00288 GHMP kinases N terminal domain FY142_01395 PF00348 Polyprenyl synthetase FY142_01410 PF01343 Peptidase family S49 FY142_01410 PF06965 Na+/H+ antiporter 1 FY142_01420 PF02091 Glycyl-tRNA synthetase alpha subunit FY142_01430 PF04011 LemA family FY142_01435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY142_01445 PF02092 Glycyl-tRNA synthetase beta subunit FY142_01445 PF05746 DALR anticodon binding domain FY142_01450 PF04463 Protein of unknown function (DUF523) FY142_01455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_01455 PF00672 HAMP domain FY142_01455 PF17200 Single Cache domain 2 FY142_01465 PF02843 Phosphoribosylglycinamide synthetase, C domain FY142_01465 PF02844 Phosphoribosylglycinamide synthetase, N domain FY142_01465 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY142_01470 PF17674 HHH domain FY142_01470 PF00575 S1 RNA binding domain FY142_01470 PF09371 Tex-like protein N-terminal domain FY142_01470 PF16921 Tex protein YqgF-like domain FY142_01485 PF01040 UbiA prenyltransferase family FY142_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_01500 PF03466 LysR substrate binding domain FY142_01510 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY142_01515 PF04452 RNA methyltransferase FY142_01520 PF01384 Phosphate transporter family FY142_01530 PF05116 Sucrose-6F-phosphate phosphohydrolase FY142_01535 PF13439 Glycosyltransferase Family 4 FY142_01535 PF00534 Glycosyl transferases group 1 FY142_01540 PF07729 FCD domain FY142_01540 PF00392 Bacterial regulatory proteins, gntR family FY142_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_01550 PF03466 LysR substrate binding domain FY142_01555 PF02913 FAD linked oxidases, C-terminal domain FY142_01555 PF01565 FAD binding domain FY142_01560 PF02913 FAD linked oxidases, C-terminal domain FY142_01560 PF01565 FAD binding domain FY142_01565 PF02754 Cysteine-rich domain FY142_01565 PF13183 4Fe-4S dicluster domain FY142_01575 PF03734 L,D-transpeptidase catalytic domain FY142_01575 PF17969 L,D-transpeptidase C-terminal domain FY142_01580 PF03352 Methyladenine glycosylase FY142_01590 PF03601 Conserved hypothetical protein 698 FY142_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_01595 PF03466 LysR substrate binding domain FY142_01625 PF03129 Anticodon binding domain FY142_01625 PF13393 Histidyl-tRNA synthetase FY142_01635 PF13393 Histidyl-tRNA synthetase FY142_01640 PF01634 ATP phosphoribosyltransferase FY142_01645 PF07681 DoxX FY142_01655 PF00118 TCP-1/cpn60 chaperonin family FY142_01660 PF00166 Chaperonin 10 Kd subunit FY142_01670 PF06574 FAD synthetase FY142_01670 PF01687 Riboflavin kinase FY142_01675 PF08264 Anticodon-binding domain of tRNA FY142_01675 PF00133 tRNA synthetases class I (I, L, M and V) FY142_01685 PF14437 MafB19-like deaminase FY142_01690 PF01479 S4 domain FY142_01690 PF00849 RNA pseudouridylate synthase FY142_01700 PF01734 Patatin-like phospholipase FY142_01705 PF00999 Sodium/hydrogen exchanger family FY142_01705 PF02254 TrkA-N domain FY142_01710 PF01523 Putative modulator of DNA gyrase FY142_01715 PF00459 Inositol monophosphatase family FY142_01725 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY142_01725 PF00534 Glycosyl transferases group 1 FY142_01735 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY142_01745 PF01119 DNA mismatch repair protein, C-terminal domain FY142_01745 PF08676 MutL C terminal dimerisation domain FY142_01750 PF00072 Response regulator receiver domain FY142_01750 PF00486 Transcriptional regulatory protein, C terminal FY142_01755 PF13188 PAS domain FY142_01755 PF03707 Bacterial signalling protein N terminal repeat FY142_01755 PF00990 Diguanylate cyclase, GGDEF domain FY142_01755 PF00563 EAL domain FY142_01760 PF08450 SMP-30/Gluconolactonase/LRE-like region FY142_01765 PF01081 KDPG and KHG aldolase FY142_01770 PF05035 2-keto-3-deoxy-galactonokinase FY142_01780 PF01614 Bacterial transcriptional regulator FY142_01780 PF09339 IclR helix-turn-helix domain FY142_01785 PF03472 Autoinducer binding domain FY142_01785 PF00196 Bacterial regulatory proteins, luxR family FY142_01795 PF10609 NUBPL iron-transfer P-loop NTPase FY142_01800 PF01544 CorA-like Mg2+ transporter protein FY142_01805 PF02705 K+ potassium transporter FY142_01820 PF00119 ATP synthase A chain FY142_01825 PF00137 ATP synthase subunit C FY142_01830 PF00430 ATP synthase B/B' CF(0) FY142_01835 PF00430 ATP synthase B/B' CF(0) FY142_01840 PF09828 Chromate resistance exported protein FY142_01845 PF02417 Chromate transporter FY142_01850 PF01351 Ribonuclease HII FY142_01865 PF01565 FAD binding domain FY142_01865 PF02913 FAD linked oxidases, C-terminal domain FY142_01870 PF03481 Putative GTP-binding controlling metal-binding FY142_01870 PF01300 Telomere recombination FY142_01880 PF00355 Rieske [2Fe-2S] domain FY142_01880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY142_01885 PF00111 2Fe-2S iron-sulfur cluster binding domain FY142_01885 PF00970 Oxidoreductase FAD-binding domain FY142_01885 PF00175 Oxidoreductase NAD-binding domain FY142_01890 PF07886 BA14K-like protein FY142_01895 PF07886 BA14K-like protein FY142_01905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_01905 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_01905 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY142_01905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_01920 PF05958 tRNA (Uracil-5-)-methyltransferase FY142_01925 PF01479 S4 domain FY142_01925 PF01728 FtsJ-like methyltransferase FY142_01930 PF02203 Tar ligand binding domain homologue FY142_01930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_01930 PF00672 HAMP domain FY142_01940 PF01037 Lrp/AsnC ligand binding domain FY142_01965 PF02780 Transketolase, C-terminal domain FY142_01965 PF02779 Transketolase, pyrimidine binding domain FY142_01965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY142_01970 PF05726 Pirin C-terminal cupin domain FY142_01970 PF02678 Pirin FY142_01975 PF02609 Exonuclease VII small subunit FY142_01980 PF00850 Histone deacetylase domain FY142_01985 PF02632 BioY family FY142_01990 PF02361 Cobalt transport protein FY142_01995 PF00005 ABC transporter FY142_02000 PF06224 Winged helix DNA-binding domain FY142_02005 PF00925 GTP cyclohydrolase II FY142_02005 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY142_02010 PF01264 Chorismate synthase FY142_02025 PF00300 Histidine phosphatase superfamily (branch 1) FY142_02035 PF01556 DnaJ C terminal domain FY142_02035 PF00684 DnaJ central domain FY142_02035 PF00226 DnaJ domain FY142_02045 PF01243 Pyridoxamine 5'-phosphate oxidase FY142_02045 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY142_02065 PF13419 Haloacid dehalogenase-like hydrolase FY142_02075 PF01523 Putative modulator of DNA gyrase FY142_02085 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY142_02085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY142_02090 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY142_02095 PF01040 UbiA prenyltransferase family FY142_02100 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY142_02105 PF00510 Cytochrome c oxidase subunit III FY142_02115 PF02104 SURF1 family FY142_02120 PF02401 LytB protein FY142_02125 PF01636 Phosphotransferase enzyme family FY142_02130 PF00075 RNase H FY142_02140 PF08534 Redoxin FY142_02140 PF00462 Glutaredoxin FY142_02150 PF02622 Uncharacterized ACR, COG1678 FY142_02155 PF05532 CsbD-like FY142_02160 PF10005 zinc-ribbon domain FY142_02160 PF15887 Putative zinc-binding metallo-peptidase FY142_02165 PF00563 EAL domain FY142_02165 PF00990 Diguanylate cyclase, GGDEF domain FY142_02165 PF13188 PAS domain FY142_02165 PF03707 Bacterial signalling protein N terminal repeat FY142_02170 PF13302 Acetyltransferase (GNAT) domain FY142_02175 PF00675 Insulinase (Peptidase family M16) FY142_02175 PF05193 Peptidase M16 inactive domain FY142_02180 PF00291 Pyridoxal-phosphate dependent enzyme FY142_02180 PF14821 Threonine synthase N terminus FY142_02200 PF13419 Haloacid dehalogenase-like hydrolase FY142_02205 PF07729 FCD domain FY142_02205 PF00392 Bacterial regulatory proteins, gntR family FY142_02220 PF18755 Restriction Enzyme Adenine Methylase Associated FY142_02220 PF01555 DNA methylase FY142_02225 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY142_02230 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY142_02240 PF14815 NUDIX domain FY142_02240 PF00730 HhH-GPD superfamily base excision DNA repair protein FY142_02255 PF13462 Thioredoxin FY142_02260 PF02463 RecF/RecN/SMC N terminal domain FY142_02265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_02270 PF00391 PEP-utilising enzyme, mobile domain FY142_02270 PF02896 PEP-utilising enzyme, TIM barrel domain FY142_02270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY142_02280 PF00375 Sodium:dicarboxylate symporter family FY142_02305 PF06039 Malate:quinone oxidoreductase (Mqo) FY142_02320 PF00009 Elongation factor Tu GTP binding domain FY142_02325 PF01507 Phosphoadenosine phosphosulfate reductase family FY142_02330 PF01507 Phosphoadenosine phosphosulfate reductase family FY142_02335 PF02082 Transcriptional regulator FY142_02345 PF00528 Binding-protein-dependent transport system inner membrane component FY142_02350 PF00528 Binding-protein-dependent transport system inner membrane component FY142_02355 PF00005 ABC transporter FY142_02355 PF12857 TOBE-like domain FY142_02360 PF02801 Beta-ketoacyl synthase, C-terminal domain FY142_02360 PF14765 Polyketide synthase dehydratase FY142_02360 PF00550 Phosphopantetheine attachment site FY142_02360 PF08659 KR domain FY142_02360 PF00109 Beta-ketoacyl synthase, N-terminal domain FY142_02360 PF16197 Ketoacyl-synthetase C-terminal extension FY142_02360 PF00698 Acyl transferase domain FY142_02360 PF08240 Alcohol dehydrogenase GroES-like domain FY142_02360 PF00107 Zinc-binding dehydrogenase FY142_02365 PF00990 Diguanylate cyclase, GGDEF domain FY142_02365 PF00563 EAL domain FY142_02365 PF00989 PAS fold FY142_02365 PF01590 GAF domain FY142_02375 PF13977 BetI-type transcriptional repressor, C-terminal FY142_02375 PF00440 Bacterial regulatory proteins, tetR family FY142_02380 PF00171 Aldehyde dehydrogenase family FY142_02385 PF05199 GMC oxidoreductase FY142_02385 PF00732 GMC oxidoreductase FY142_02415 PF00043 Glutathione S-transferase, C-terminal domain FY142_02415 PF02798 Glutathione S-transferase, N-terminal domain FY142_02425 PF07690 Major Facilitator Superfamily FY142_02435 PF05973 Phage derived protein Gp49-like (DUF891) FY142_02445 PF04679 ATP dependent DNA ligase C terminal region FY142_02445 PF01068 ATP dependent DNA ligase domain FY142_02445 PF04675 DNA ligase N terminus FY142_02455 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY142_02460 PF00403 Heavy-metal-associated domain FY142_02465 PF17969 L,D-transpeptidase C-terminal domain FY142_02465 PF03734 L,D-transpeptidase catalytic domain FY142_02470 PF17969 L,D-transpeptidase C-terminal domain FY142_02470 PF03734 L,D-transpeptidase catalytic domain FY142_02475 PF01047 MarR family FY142_02480 PF02566 OsmC-like protein FY142_02495 PF00005 ABC transporter FY142_02495 PF12848 ABC transporter FY142_02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_02525 PF03466 LysR substrate binding domain FY142_02530 PF00106 short chain dehydrogenase FY142_02545 PF05872 Bacterial protein of unknown function (DUF853) FY142_02555 PF01638 HxlR-like helix-turn-helix FY142_02560 PF00106 short chain dehydrogenase FY142_02565 PF12833 Helix-turn-helix domain FY142_02575 PF00248 Aldo/keto reductase family FY142_02580 PF01062 Bestrophin, RFP-TM, chloride channel FY142_02585 PF13280 WYL domain FY142_02585 PF08279 HTH domain FY142_02600 PF01063 Amino-transferase class IV FY142_02605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_02605 PF00672 HAMP domain FY142_02610 PF03466 LysR substrate binding domain FY142_02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_02625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY142_02625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY142_02640 PF01810 LysE type translocator FY142_02645 PF01322 Cytochrome C' FY142_02650 PF00034 Cytochrome c FY142_02680 PF00561 alpha/beta hydrolase fold FY142_02685 PF09278 MerR, DNA binding FY142_02685 PF00376 MerR family regulatory protein FY142_02695 PF02583 Metal-sensitive transcriptional repressor FY142_02710 PF00005 ABC transporter FY142_02710 PF00571 CBS domain FY142_02715 PF00528 Binding-protein-dependent transport system inner membrane component FY142_02730 PF00326 Prolyl oligopeptidase family FY142_02730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY142_02740 PF00701 Dihydrodipicolinate synthetase family FY142_02750 PF02805 Metal binding domain of Ada FY142_02750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY142_02750 PF12833 Helix-turn-helix domain FY142_02750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY142_02755 PF01594 AI-2E family transporter FY142_02760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_02780 PF03006 Haemolysin-III related FY142_02790 PF01810 LysE type translocator FY142_02795 PF01641 SelR domain FY142_02800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY142_02800 PF13244 Domain of unknown function (DUF4040) FY142_02800 PF00361 Proton-conducting membrane transporter FY142_02805 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY142_02810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY142_02815 PF00361 Proton-conducting membrane transporter FY142_02820 PF01899 Na+/H+ ion antiporter subunit FY142_02825 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY142_02830 PF03334 Na+/H+ antiporter subunit FY142_02835 PF05443 ROS/MUCR transcriptional regulator protein FY142_02850 PF02657 Fe-S metabolism associated domain FY142_02855 PF17264 Family of unknown function (DUF5330) FY142_02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_02860 PF00512 His Kinase A (phospho-acceptor) domain FY142_02895 PF01810 LysE type translocator FY142_02900 PF03466 LysR substrate binding domain FY142_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_02905 PF00905 Penicillin binding protein transpeptidase domain FY142_02905 PF00912 Transglycosylase FY142_02910 PF03692 Putative zinc- or iron-chelating domain FY142_02915 PF00905 Penicillin binding protein transpeptidase domain FY142_02925 PF00403 Heavy-metal-associated domain FY142_02930 PF00376 MerR family regulatory protein FY142_02930 PF09278 MerR, DNA binding FY142_02955 PF07690 Major Facilitator Superfamily FY142_02960 PF08244 Glycosyl hydrolases family 32 C terminal FY142_02960 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY142_02965 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY142_02975 PF13404 AsnC-type helix-turn-helix domain FY142_02975 PF01037 Lrp/AsnC ligand binding domain FY142_03015 PF04860 Phage portal protein FY142_03105 PF00486 Transcriptional regulatory protein, C terminal FY142_03105 PF00072 Response regulator receiver domain FY142_03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_03125 PF03100 CcmE FY142_03130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY142_03130 PF01578 Cytochrome C assembly protein FY142_03135 PF03918 Cytochrome C biogenesis protein FY142_03140 PF13180 PDZ domain FY142_03145 PF00486 Transcriptional regulatory protein, C terminal FY142_03145 PF00072 Response regulator receiver domain FY142_03150 PF00512 His Kinase A (phospho-acceptor) domain FY142_03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_03150 PF00672 HAMP domain FY142_03155 PF04134 Protein of unknown function, DUF393 FY142_03160 PF06629 MltA-interacting protein MipA FY142_03165 PF08335 GlnD PII-uridylyltransferase FY142_03165 PF03710 Glutamate-ammonia ligase adenylyltransferase FY142_03170 PF00989 PAS fold FY142_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_03170 PF00512 His Kinase A (phospho-acceptor) domain FY142_03180 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY142_03180 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY142_03180 PF01433 Peptidase family M1 domain FY142_03185 PF00892 EamA-like transporter family FY142_03200 PF00012 Hsp70 protein FY142_03205 PF00990 Diguanylate cyclase, GGDEF domain FY142_03235 PF00107 Zinc-binding dehydrogenase FY142_03235 PF08240 Alcohol dehydrogenase GroES-like domain FY142_03240 PF01638 HxlR-like helix-turn-helix FY142_03245 PF02673 Bacitracin resistance protein BacA FY142_03250 PF03448 MgtE intracellular N domain FY142_03250 PF01769 Divalent cation transporter FY142_03250 PF00571 CBS domain FY142_03255 PF07690 Major Facilitator Superfamily FY142_03260 PF00781 Diacylglycerol kinase catalytic domain FY142_03265 PF00202 Aminotransferase class-III FY142_03280 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY142_03280 PF01048 Phosphorylase superfamily FY142_03305 PF00155 Aminotransferase class I and II FY142_03315 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_03315 PF14759 Reductase C-terminal FY142_03320 PF03328 HpcH/HpaI aldolase/citrate lyase family FY142_03335 PF02530 Porin subfamily FY142_03340 PF02530 Porin subfamily FY142_03345 PF14718 Soluble lytic murein transglycosylase L domain FY142_03345 PF01464 Transglycosylase SLT domain FY142_03350 PF00701 Dihydrodipicolinate synthetase family FY142_03355 PF01668 SmpB protein FY142_03360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_03370 PF01192 RNA polymerase Rpb6 FY142_03375 PF02824 TGS domain FY142_03375 PF13291 ACT domain FY142_03375 PF04607 Region found in RelA / SpoT proteins FY142_03390 PF01648 4'-phosphopantetheinyl transferase superfamily FY142_03395 PF10502 Signal peptidase, peptidase S26 FY142_03400 PF00035 Double-stranded RNA binding motif FY142_03400 PF14622 Ribonuclease-III-like FY142_03405 PF07650 KH domain FY142_03405 PF01926 50S ribosome-binding GTPase FY142_03415 PF00072 Response regulator receiver domain FY142_03420 PF11967 Recombination protein O N terminal FY142_03420 PF02565 Recombination protein O C terminal FY142_03425 PF07690 Major Facilitator Superfamily FY142_03430 PF08241 Methyltransferase domain FY142_03440 PF01966 HD domain FY142_03450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_03460 PF00005 ABC transporter FY142_03465 PF00528 Binding-protein-dependent transport system inner membrane component FY142_03470 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY142_03475 PF05552 Conserved TM helix FY142_03475 PF00924 Mechanosensitive ion channel FY142_03485 PF01966 HD domain FY142_03490 PF01571 Aminomethyltransferase folate-binding domain FY142_03510 PF00293 NUDIX domain FY142_03515 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY142_03525 PF00072 Response regulator receiver domain FY142_03525 PF00990 Diguanylate cyclase, GGDEF domain FY142_03530 PF01066 CDP-alcohol phosphatidyltransferase FY142_03535 PF02666 Phosphatidylserine decarboxylase FY142_03540 PF00664 ABC transporter transmembrane region FY142_03540 PF00005 ABC transporter FY142_03550 PF03641 Possible lysine decarboxylase FY142_03555 PF03717 Penicillin-binding Protein dimerisation domain FY142_03555 PF00905 Penicillin binding protein transpeptidase domain FY142_03565 PF00561 alpha/beta hydrolase fold FY142_03580 PF04480 Protein of unknown function (DUF559) FY142_03585 PF01406 tRNA synthetases class I (C) catalytic domain FY142_03585 PF09190 DALR domain FY142_03590 PF00106 short chain dehydrogenase FY142_03595 PF00156 Phosphoribosyl transferase domain FY142_03595 PF13537 Glutamine amidotransferase domain FY142_03600 PF02674 Colicin V production protein FY142_03605 PF06745 KaiC FY142_03605 PF18073 Rubredoxin metal binding domain FY142_03615 PF01168 Alanine racemase, N-terminal domain FY142_03615 PF00842 Alanine racemase, C-terminal domain FY142_03620 PF12833 Helix-turn-helix domain FY142_03620 PF12852 Cupin FY142_03625 PF03591 AzlC protein FY142_03635 PF03796 DnaB-like helicase C terminal domain FY142_03635 PF00772 DnaB-like helicase N terminal domain FY142_03650 PF13533 Biotin-lipoyl like FY142_03655 PF01281 Ribosomal protein L9, N-terminal domain FY142_03655 PF03948 Ribosomal protein L9, C-terminal domain FY142_03665 PF01084 Ribosomal protein S18 FY142_03670 PF01250 Ribosomal protein S6 FY142_03680 PF00248 Aldo/keto reductase family FY142_03685 PF00698 Acyl transferase domain FY142_03695 PF00550 Phosphopantetheine attachment site FY142_03700 PF00109 Beta-ketoacyl synthase, N-terminal domain FY142_03700 PF02801 Beta-ketoacyl synthase, C-terminal domain FY142_03710 PF02618 YceG-like family FY142_03715 PF08340 Domain of unknown function (DUF1732) FY142_03715 PF03755 YicC-like family, N-terminal region FY142_03720 PF00625 Guanylate kinase FY142_03735 PF00398 Ribosomal RNA adenine dimethylase FY142_03740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY142_03750 PF04453 LPS transport system D FY142_03750 PF03968 OstA-like protein FY142_03765 PF00883 Cytosol aminopeptidase family, catalytic domain FY142_03765 PF02789 Cytosol aminopeptidase family, N-terminal domain FY142_03775 PF00563 EAL domain FY142_03775 PF00990 Diguanylate cyclase, GGDEF domain FY142_03775 PF03707 Bacterial signalling protein N terminal repeat FY142_03780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_03785 PF00563 EAL domain FY142_03785 PF01590 GAF domain FY142_03785 PF00990 Diguanylate cyclase, GGDEF domain FY142_03785 PF00360 Phytochrome region FY142_03790 PF00990 Diguanylate cyclase, GGDEF domain FY142_03790 PF00563 EAL domain FY142_03790 PF03707 Bacterial signalling protein N terminal repeat FY142_03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_03795 PF00512 His Kinase A (phospho-acceptor) domain FY142_03795 PF00989 PAS fold FY142_03800 PF00196 Bacterial regulatory proteins, luxR family FY142_03800 PF00072 Response regulator receiver domain FY142_03810 PF12848 ABC transporter FY142_03810 PF00005 ABC transporter FY142_03815 PF17158 Membrane-associated sensor, integral membrane domain FY142_03815 PF00990 Diguanylate cyclase, GGDEF domain FY142_03820 PF13417 Glutathione S-transferase, N-terminal domain FY142_03825 PF00334 Nucleoside diphosphate kinase FY142_03845 PF02391 MoaE protein FY142_03855 PF01066 CDP-alcohol phosphatidyltransferase FY142_03860 PF08459 UvrC Helix-hairpin-helix N-terminal FY142_03860 PF02151 UvrB/uvrC motif FY142_03860 PF01541 GIY-YIG catalytic domain FY142_03870 PF13505 Outer membrane protein beta-barrel domain FY142_03880 PF00445 Ribonuclease T2 family FY142_03890 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY142_03895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY142_03895 PF01568 Molydopterin dinucleotide binding domain FY142_03895 PF00384 Molybdopterin oxidoreductase FY142_03900 PF00293 NUDIX domain FY142_03910 PF00551 Formyl transferase FY142_03915 PF02769 AIR synthase related protein, C-terminal domain FY142_03915 PF00586 AIR synthase related protein, N-terminal domain FY142_03920 PF01209 ubiE/COQ5 methyltransferase family FY142_03925 PF01594 AI-2E family transporter FY142_03935 PF02503 Polyphosphate kinase middle domain FY142_03935 PF13090 Polyphosphate kinase C-terminal domain 2 FY142_03935 PF13089 Polyphosphate kinase N-terminal domain FY142_03935 PF17941 Polyphosphate kinase C-terminal domain 1 FY142_03940 PF02541 Ppx/GppA phosphatase family FY142_03945 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_03965 PF00211 Adenylate and Guanylate cyclase catalytic domain FY142_03975 PF01612 3'-5' exonuclease FY142_03975 PF00570 HRDC domain FY142_03980 PF07690 Major Facilitator Superfamily FY142_03985 PF02938 GAD domain FY142_03985 PF00152 tRNA synthetases class II (D, K and N) FY142_03985 PF01336 OB-fold nucleic acid binding domain FY142_03995 PF00672 HAMP domain FY142_03995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_04000 PF01740 STAS domain FY142_04000 PF00916 Sulfate permease family FY142_04010 PF00521 DNA gyrase/topoisomerase IV, subunit A FY142_04010 PF03989 DNA gyrase C-terminal domain, beta-propeller FY142_04015 PF04377 Arginine-tRNA-protein transferase, C terminus FY142_04015 PF04376 Arginine-tRNA-protein transferase, N terminus FY142_04025 PF00490 Delta-aminolevulinic acid dehydratase FY142_04045 PF00464 Serine hydroxymethyltransferase FY142_04050 PF03477 ATP cone domain FY142_04055 PF01872 RibD C-terminal domain FY142_04055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY142_04060 PF00677 Lumazine binding domain FY142_04065 PF01810 LysE type translocator FY142_04070 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY142_04075 PF01029 NusB family FY142_04080 PF07690 Major Facilitator Superfamily FY142_04085 PF03030 Inorganic H+ pyrophosphatase FY142_04105 PF02504 Fatty acid synthesis protein FY142_04110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY142_04110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY142_04115 PF00216 Bacterial DNA-binding protein FY142_04120 PF13411 MerR HTH family regulatory protein FY142_04135 PF00403 Heavy-metal-associated domain FY142_04140 PF00175 Oxidoreductase NAD-binding domain FY142_04140 PF00111 2Fe-2S iron-sulfur cluster binding domain FY142_04140 PF00970 Oxidoreductase FAD-binding domain FY142_04145 PF00376 MerR family regulatory protein FY142_04145 PF09278 MerR, DNA binding FY142_04150 PF00528 Binding-protein-dependent transport system inner membrane component FY142_04155 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_04155 PF00528 Binding-protein-dependent transport system inner membrane component FY142_04160 PF00005 ABC transporter FY142_04160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_04165 PF00005 ABC transporter FY142_04165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_04170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_04180 PF02386 Cation transport protein FY142_04185 PF00291 Pyridoxal-phosphate dependent enzyme FY142_04185 PF00585 C-terminal regulatory domain of Threonine dehydratase FY142_04195 PF00990 Diguanylate cyclase, GGDEF domain FY142_04200 PF02525 Flavodoxin-like fold FY142_04205 PF03466 LysR substrate binding domain FY142_04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_04210 PF02872 5'-nucleotidase, C-terminal domain FY142_04210 PF00149 Calcineurin-like phosphoesterase FY142_04230 PF00581 Rhodanese-like domain FY142_04235 PF02272 DHHA1 domain FY142_04235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY142_04235 PF01411 tRNA synthetases class II (A) FY142_04240 PF00571 CBS domain FY142_04240 PF00291 Pyridoxal-phosphate dependent enzyme FY142_04245 PF03441 FAD binding domain of DNA photolyase FY142_04245 PF00875 DNA photolyase FY142_04255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY142_04255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY142_04285 PF06055 Exopolysaccharide synthesis, ExoD FY142_04290 PF09335 SNARE associated Golgi protein FY142_04335 PF02397 Bacterial sugar transferase FY142_04340 PF00534 Glycosyl transferases group 1 FY142_04365 PF02628 Cytochrome oxidase assembly protein FY142_04370 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY142_04375 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY142_04380 PF00491 Arginase family FY142_04385 PF00380 Ribosomal protein S9/S16 FY142_04390 PF00572 Ribosomal protein L13 FY142_04400 PF13380 CoA binding domain FY142_04405 PF01053 Cys/Met metabolism PLP-dependent enzyme FY142_04430 PF00067 Cytochrome P450 FY142_04435 PF00990 Diguanylate cyclase, GGDEF domain FY142_04440 PF00574 Clp protease FY142_04445 PF06689 ClpX C4-type zinc finger FY142_04445 PF10431 C-terminal, D2-small domain, of ClpB protein FY142_04445 PF07724 AAA domain (Cdc48 subfamily) FY142_04450 PF05362 Lon protease (S16) C-terminal proteolytic domain FY142_04450 PF00004 ATPase family associated with various cellular activities (AAA) FY142_04450 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY142_04455 PF00216 Bacterial DNA-binding protein FY142_04460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY142_04485 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY142_04490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY142_04495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY142_04505 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY142_04520 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY142_04520 PF10531 SLBB domain FY142_04520 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY142_04525 PF00384 Molybdopterin oxidoreductase FY142_04525 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY142_04525 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY142_04530 PF00146 NADH dehydrogenase FY142_04535 PF12838 4Fe-4S dicluster domain FY142_04540 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY142_04545 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY142_04550 PF00361 Proton-conducting membrane transporter FY142_04550 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY142_04555 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY142_04555 PF00361 Proton-conducting membrane transporter FY142_04560 PF00361 Proton-conducting membrane transporter FY142_04565 PF02237 Biotin protein ligase C terminal domain FY142_04565 PF03099 Biotin/lipoate A/B protein ligase family FY142_04565 PF08279 HTH domain FY142_04570 PF17770 Ribonuclease J C-terminal domain FY142_04570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY142_04570 PF12706 Beta-lactamase superfamily domain FY142_04580 PF03129 Anticodon binding domain FY142_04580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY142_04585 PF02687 FtsX-like permease family FY142_04585 PF12704 MacB-like periplasmic core domain FY142_04590 PF00005 ABC transporter FY142_04595 PF02811 PHP domain FY142_04595 PF14579 Helix-hairpin-helix motif FY142_04595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY142_04595 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY142_04605 PF00817 impB/mucB/samB family FY142_04605 PF11799 impB/mucB/samB family C-terminal domain FY142_04625 PF00072 Response regulator receiver domain FY142_04630 PF00990 Diguanylate cyclase, GGDEF domain FY142_04630 PF00072 Response regulator receiver domain FY142_04635 PF00471 Ribosomal protein L33 FY142_04640 PF07690 Major Facilitator Superfamily FY142_04655 PF08206 Ribonuclease B OB domain FY142_04655 PF17876 Cold shock domain FY142_04655 PF00575 S1 RNA binding domain FY142_04655 PF08461 Ribonuclease R winged-helix domain FY142_04655 PF00773 RNB domain FY142_04660 PF01751 Toprim domain FY142_04660 PF01131 DNA topoisomerase FY142_04660 PF01396 Topoisomerase DNA binding C4 zinc finger FY142_04660 PF13368 Topoisomerase C-terminal repeat FY142_04670 PF17782 DprA winged helix domain FY142_04670 PF02481 DNA recombination-mediator protein A FY142_04675 PF02660 Glycerol-3-phosphate acyltransferase FY142_04680 PF01979 Amidohydrolase family FY142_04685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY142_04685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY142_04700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_04700 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_04700 PF18158 Adaptive response protein AidB N-terminal domain FY142_04705 PF00583 Acetyltransferase (GNAT) family FY142_04720 PF03652 Holliday junction resolvase FY142_04725 PF08274 PhnA Zinc-Ribbon FY142_04725 PF03831 PhnA domain FY142_04735 PF02686 Glu-tRNAGln amidotransferase C subunit FY142_04740 PF01425 Amidase FY142_04745 PF00583 Acetyltransferase (GNAT) family FY142_04745 PF13673 Acetyltransferase (GNAT) domain FY142_04750 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY142_04765 PF02934 GatB/GatE catalytic domain FY142_04765 PF02637 GatB domain FY142_04795 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY142_04800 PF02785 Biotin carboxylase C-terminal domain FY142_04800 PF00289 Biotin carboxylase, N-terminal domain FY142_04800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_04805 PF00364 Biotin-requiring enzyme FY142_04810 PF01220 Dehydroquinase class II FY142_04820 PF00155 Aminotransferase class I and II FY142_04845 PF10150 Ribonuclease E/G family FY142_04845 PF12111 Polyribonucleotide phosphorylase C terminal FY142_04845 PF00575 S1 RNA binding domain FY142_04850 PF01520 N-acetylmuramoyl-L-alanine amidase FY142_04855 PF17092 Penicillin-binding protein OB-like domain FY142_04855 PF00905 Penicillin binding protein transpeptidase domain FY142_04855 PF00912 Transglycosylase FY142_04875 PF01513 ATP-NAD kinase FY142_04880 PF02567 Phenazine biosynthesis-like protein FY142_04885 PF00009 Elongation factor Tu GTP binding domain FY142_04885 PF00679 Elongation factor G C-terminus FY142_04885 PF03764 Elongation factor G, domain IV FY142_04900 PF00111 2Fe-2S iron-sulfur cluster binding domain FY142_04910 PF00809 Pterin binding enzyme FY142_04915 PF02152 Dihydroneopterin aldolase FY142_04920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY142_04930 PF05128 Domain of unknown function (DUF697) FY142_04935 PF04317 YcjX-like family, DUF463 FY142_04945 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY142_04960 PF08448 PAS fold FY142_04960 PF00512 His Kinase A (phospho-acceptor) domain FY142_04960 PF13188 PAS domain FY142_04960 PF00072 Response regulator receiver domain FY142_04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_04965 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY142_04970 PF02861 Clp amino terminal domain, pathogenicity island component FY142_04970 PF17871 AAA lid domain FY142_04970 PF10431 C-terminal, D2-small domain, of ClpB protein FY142_04970 PF00004 ATPase family associated with various cellular activities (AAA) FY142_04970 PF07724 AAA domain (Cdc48 subfamily) FY142_04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_04990 PF03466 LysR substrate binding domain FY142_05000 PF01230 HIT domain FY142_05025 PF00318 Ribosomal protein S2 FY142_05030 PF00889 Elongation factor TS FY142_05035 PF00696 Amino acid kinase family FY142_05040 PF01765 Ribosome recycling factor FY142_05045 PF01255 Putative undecaprenyl diphosphate synthase FY142_05055 PF02163 Peptidase family M50 FY142_05055 PF17820 PDZ domain FY142_05060 PF01103 Surface antigen FY142_05060 PF07244 Surface antigen variable number repeat FY142_05065 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_05065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY142_05070 PF07977 FabA-like domain FY142_05075 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY142_05075 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_05080 PF06230 LpxI C-terminal domain FY142_05080 PF17930 LpxI N-terminal domain FY142_05085 PF02684 Lipid-A-disaccharide synthetase FY142_05090 PF07729 FCD domain FY142_05090 PF00392 Bacterial regulatory proteins, gntR family FY142_05095 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_05100 PF00528 Binding-protein-dependent transport system inner membrane component FY142_05105 PF00528 Binding-protein-dependent transport system inner membrane component FY142_05110 PF00005 ABC transporter FY142_05115 PF00285 Citrate synthase, C-terminal domain FY142_05130 PF01726 LexA DNA binding domain FY142_05130 PF00717 Peptidase S24-like FY142_05155 PF00437 Type II/IV secretion system protein FY142_05155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FY142_05160 PF00482 Type II secretion system (T2SS), protein F FY142_05180 PF07963 Prokaryotic N-terminal methylation motif FY142_05180 PF08334 Type II secretion system (T2SS), protein G FY142_05190 PF00263 Bacterial type II and III secretion system protein FY142_05190 PF03958 Bacterial type II/III secretion system short domain FY142_05215 PF00793 DAHP synthetase I family FY142_05220 PF03952 Enolase, N-terminal domain FY142_05220 PF00113 Enolase, C-terminal TIM barrel domain FY142_05230 PF00676 Dehydrogenase E1 component FY142_05235 PF00364 Biotin-requiring enzyme FY142_05235 PF02779 Transketolase, pyrimidine binding domain FY142_05235 PF02780 Transketolase, C-terminal domain FY142_05240 PF02817 e3 binding domain FY142_05240 PF00364 Biotin-requiring enzyme FY142_05240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY142_05250 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_05250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY142_05260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY142_05260 PF04055 Radical SAM superfamily FY142_05265 PF00892 EamA-like transporter family FY142_05280 PF03364 Polyketide cyclase / dehydrase and lipid transport FY142_05285 PF02464 Competence-damaged protein FY142_05290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY142_05290 PF02542 YgbB family FY142_05295 PF01207 Dihydrouridine synthase (Dus) FY142_05300 PF00989 PAS fold FY142_05300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_05300 PF00512 His Kinase A (phospho-acceptor) domain FY142_05305 PF02954 Bacterial regulatory protein, Fis family FY142_05305 PF00072 Response regulator receiver domain FY142_05305 PF00158 Sigma-54 interaction domain FY142_05310 PF00672 HAMP domain FY142_05310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_05310 PF00512 His Kinase A (phospho-acceptor) domain FY142_05310 PF00989 PAS fold FY142_05315 PF00072 Response regulator receiver domain FY142_05315 PF02954 Bacterial regulatory protein, Fis family FY142_05315 PF00158 Sigma-54 interaction domain FY142_05320 PF02254 TrkA-N domain FY142_05320 PF02080 TrkA-C domain FY142_05325 PF17209 Hfq protein FY142_05330 PF16360 GTP-binding GTPase Middle Region FY142_05330 PF13167 GTP-binding GTPase N-terminal FY142_05330 PF01926 50S ribosome-binding GTPase FY142_05335 PF03819 MazG nucleotide pyrophosphohydrolase domain FY142_05345 PF10414 Sirohaem synthase dimerisation region FY142_05345 PF14824 Sirohaem biosynthesis protein central FY142_05345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_05365 PF00970 Oxidoreductase FAD-binding domain FY142_05365 PF00175 Oxidoreductase NAD-binding domain FY142_05385 PF02347 Glycine cleavage system P-protein FY142_05390 PF01597 Glycine cleavage H-protein FY142_05395 PF01571 Aminomethyltransferase folate-binding domain FY142_05395 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY142_05420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY142_05425 PF01479 S4 domain FY142_05425 PF00849 RNA pseudouridylate synthase FY142_05430 PF13419 Haloacid dehalogenase-like hydrolase FY142_05445 PF01042 Endoribonuclease L-PSP FY142_05450 PF00756 Putative esterase FY142_05460 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY142_05475 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY142_05475 PF00578 AhpC/TSA family FY142_05480 PF00043 Glutathione S-transferase, C-terminal domain FY142_05480 PF02798 Glutathione S-transferase, N-terminal domain FY142_05495 PF03358 NADPH-dependent FMN reductase FY142_05500 PF03960 ArsC family FY142_05505 PF01758 Sodium Bile acid symporter family FY142_05510 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY142_05520 PF00654 Voltage gated chloride channel FY142_05525 PF12706 Beta-lactamase superfamily domain FY142_05525 PF03099 Biotin/lipoate A/B protein ligase family FY142_05530 PF01026 TatD related DNase FY142_05535 PF08264 Anticodon-binding domain of tRNA FY142_05535 PF09334 tRNA synthetases class I (M) FY142_05540 PF09115 DNA polymerase III, delta subunit, C terminal FY142_05545 PF02223 Thymidylate kinase FY142_05550 PF07943 Penicillin-binding protein 5, C-terminal domain FY142_05550 PF00768 D-alanyl-D-alanine carboxypeptidase FY142_05555 PF03330 Lytic transglycolase FY142_05555 PF05036 Sporulation related domain FY142_05595 PF03989 DNA gyrase C-terminal domain, beta-propeller FY142_05595 PF00521 DNA gyrase/topoisomerase IV, subunit A FY142_05600 PF01914 MarC family integral membrane protein FY142_05605 PF00571 CBS domain FY142_05605 PF01743 Poly A polymerase head domain FY142_05615 PF00436 Single-strand binding protein family FY142_05620 PF17755 UvrA DNA-binding domain FY142_05620 PF17760 UvrA interaction domain FY142_05630 PF01207 Dihydrouridine synthase (Dus) FY142_05635 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY142_05640 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_05650 PF00950 ABC 3 transport family FY142_05655 PF00005 ABC transporter FY142_05660 PF01297 Zinc-uptake complex component A periplasmic FY142_05665 PF00356 Bacterial regulatory proteins, lacI family FY142_05675 PF00248 Aldo/keto reductase family FY142_05685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY142_05685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY142_05690 PF03597 Cytochrome oxidase maturation protein cbb3-type FY142_05700 PF05751 FixH FY142_05705 PF13746 4Fe-4S dicluster domain FY142_05705 PF12801 4Fe-4S binding domain FY142_05705 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY142_05725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY142_05725 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY142_05740 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY142_05745 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY142_05765 PF09278 MerR, DNA binding FY142_05765 PF00376 MerR family regulatory protein FY142_05770 PF01769 Divalent cation transporter FY142_05770 PF03448 MgtE intracellular N domain FY142_05770 PF00571 CBS domain FY142_05775 PF00384 Molybdopterin oxidoreductase FY142_05785 PF01327 Polypeptide deformylase FY142_05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_05795 PF00512 His Kinase A (phospho-acceptor) domain FY142_05795 PF00989 PAS fold FY142_05805 PF03099 Biotin/lipoate A/B protein ligase family FY142_05810 PF08240 Alcohol dehydrogenase GroES-like domain FY142_05810 PF00107 Zinc-binding dehydrogenase FY142_05835 PF07549 SecD/SecF GG Motif FY142_05835 PF02355 Protein export membrane protein FY142_05840 PF02699 Preprotein translocase subunit FY142_05850 PF08240 Alcohol dehydrogenase GroES-like domain FY142_05850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY142_05855 PF08360 QacR-like protein, C-terminal region FY142_05855 PF00440 Bacterial regulatory proteins, tetR family FY142_05860 PF00067 Cytochrome P450 FY142_05870 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_05870 PF06426 Serine acetyltransferase, N-terminal FY142_05875 PF00561 alpha/beta hydrolase fold FY142_05885 PF01494 FAD binding domain FY142_05890 PF01053 Cys/Met metabolism PLP-dependent enzyme FY142_05895 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_05900 PF00528 Binding-protein-dependent transport system inner membrane component FY142_05905 PF00528 Binding-protein-dependent transport system inner membrane component FY142_05910 PF00005 ABC transporter FY142_05925 PF01368 DHH family FY142_05925 PF17768 RecJ OB domain FY142_05925 PF02272 DHHA1 domain FY142_05935 PF01842 ACT domain FY142_05935 PF03447 Homoserine dehydrogenase, NAD binding domain FY142_05935 PF00742 Homoserine dehydrogenase FY142_05940 PF00155 Aminotransferase class I and II FY142_05945 PF01156 Inosine-uridine preferring nucleoside hydrolase FY142_05950 PF01925 Sulfite exporter TauE/SafE FY142_05965 PF00107 Zinc-binding dehydrogenase FY142_05965 PF08240 Alcohol dehydrogenase GroES-like domain FY142_05970 PF02801 Beta-ketoacyl synthase, C-terminal domain FY142_05970 PF00109 Beta-ketoacyl synthase, N-terminal domain FY142_05980 PF07977 FabA-like domain FY142_05985 PF00550 Phosphopantetheine attachment site FY142_05990 PF04055 Radical SAM superfamily FY142_05995 PF00027 Cyclic nucleotide-binding domain FY142_05995 PF13545 Crp-like helix-turn-helix domain FY142_06005 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY142_06010 PF17746 SfsA N-terminal OB domain FY142_06010 PF03749 Sugar fermentation stimulation protein RE domain FY142_06015 PF00557 Metallopeptidase family M24 FY142_06020 PF04002 RadC-like JAB domain FY142_06035 PF01474 Class-II DAHP synthetase family FY142_06050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY142_06050 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_06060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY142_06065 PF13419 Haloacid dehalogenase-like hydrolase FY142_06075 PF10415 Fumarase C C-terminus FY142_06075 PF00206 Lyase FY142_06085 PF06418 CTP synthase N-terminus FY142_06085 PF00117 Glutamine amidotransferase class-I FY142_06090 PF03840 Preprotein translocase SecG subunit FY142_06095 PF00121 Triosephosphate isomerase FY142_06105 PF01751 Toprim domain FY142_06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_06105 PF00986 DNA gyrase B subunit, carboxyl terminus FY142_06105 PF00204 DNA gyrase B FY142_06110 PF01370 NAD dependent epimerase/dehydratase family FY142_06115 PF00574 Clp protease FY142_06125 PF01022 Bacterial regulatory protein, arsR family FY142_06130 PF13091 PLD-like domain FY142_06135 PF00072 Response regulator receiver domain FY142_06140 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY142_06140 PF01571 Aminomethyltransferase folate-binding domain FY142_06140 PF16350 FAD dependent oxidoreductase central domain FY142_06140 PF01266 FAD dependent oxidoreductase FY142_06150 PF12795 Mechanosensitive ion channel porin domain FY142_06150 PF00924 Mechanosensitive ion channel FY142_06150 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY142_06215 PF00005 ABC transporter FY142_06220 PF02405 Permease MlaE FY142_06225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_06225 PF13378 Enolase C-terminal domain-like FY142_06235 PF03949 Malic enzyme, NAD binding domain FY142_06235 PF00390 Malic enzyme, N-terminal domain FY142_06235 PF01515 Phosphate acetyl/butaryl transferase FY142_06245 PF00881 Nitroreductase family FY142_06250 PF07676 WD40-like Beta Propeller Repeat FY142_06260 PF02540 NAD synthase FY142_06260 PF00795 Carbon-nitrogen hydrolase FY142_06265 PF00884 Sulfatase FY142_06275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_06275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY142_06290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY142_06290 PF05698 Bacterial trigger factor protein (TF) C-terminus FY142_06290 PF05697 Bacterial trigger factor protein (TF) FY142_06310 PF01134 Glucose inhibited division protein A FY142_06330 PF08240 Alcohol dehydrogenase GroES-like domain FY142_06330 PF00107 Zinc-binding dehydrogenase FY142_06340 PF00550 Phosphopantetheine attachment site FY142_06345 PF13193 AMP-binding enzyme C-terminal domain FY142_06345 PF00501 AMP-binding enzyme FY142_06355 PF00117 Glutamine amidotransferase class-I FY142_06355 PF00425 chorismate binding enzyme FY142_06355 PF04715 Anthranilate synthase component I, N terminal region FY142_06360 PF01702 Queuine tRNA-ribosyltransferase FY142_06365 PF02547 Queuosine biosynthesis protein FY142_06370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY142_06375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY142_06380 PF01467 Cytidylyltransferase-like FY142_06395 PF00591 Glycosyl transferase family, a/b domain FY142_06395 PF02885 Glycosyl transferase family, helical bundle domain FY142_06400 PF00218 Indole-3-glycerol phosphate synthase FY142_06405 PF01967 MoaC family FY142_06410 PF03454 MoeA C-terminal region (domain IV) FY142_06410 PF00994 Probable molybdopterin binding domain FY142_06410 PF03453 MoeA N-terminal region (domain I and II) FY142_06415 PF00990 Diguanylate cyclase, GGDEF domain FY142_06415 PF17158 Membrane-associated sensor, integral membrane domain FY142_06425 PF02254 TrkA-N domain FY142_06425 PF00999 Sodium/hydrogen exchanger family FY142_06435 PF04055 Radical SAM superfamily FY142_06435 PF06463 Molybdenum Cofactor Synthesis C FY142_06445 PF07690 Major Facilitator Superfamily FY142_06450 PF12804 MobA-like NTP transferase domain FY142_06455 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY142_06460 PF01551 Peptidase family M23 FY142_06470 PF01975 Survival protein SurE FY142_06475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY142_06475 PF02403 Seryl-tRNA synthetase N-terminal domain FY142_06480 PF00902 Sec-independent protein translocase protein (TatC) FY142_06485 PF02416 mttA/Hcf106 family FY142_06490 PF02416 mttA/Hcf106 family FY142_06495 PF04079 Segregation and condensation complex subunit ScpB FY142_06500 PF02616 Segregation and condensation protein ScpA FY142_06505 PF00933 Glycosyl hydrolase family 3 N terminal domain FY142_06515 PF00750 tRNA synthetases class I (R) FY142_06515 PF05746 DALR anticodon binding domain FY142_06515 PF03485 Arginyl tRNA synthetase N terminal domain FY142_06520 PF13286 Phosphohydrolase-associated domain FY142_06520 PF01966 HD domain FY142_06525 PF01521 Iron-sulphur cluster biosynthesis FY142_06535 PF08238 Sel1 repeat FY142_06545 PF00133 tRNA synthetases class I (I, L, M and V) FY142_06545 PF08264 Anticodon-binding domain of tRNA FY142_06545 PF10458 Valyl tRNA synthetase tRNA binding arm FY142_06695 PF00565 Staphylococcal nuclease homologue FY142_06770 PF06381 Protein of unknown function (DUF1073) FY142_06820 PF08299 Bacterial dnaA protein helix-turn-helix FY142_06820 PF00308 Bacterial dnaA protein FY142_06820 PF11638 DnaA N-terminal domain FY142_06840 PF00145 C-5 cytosine-specific DNA methylase FY142_06845 PF00772 DnaB-like helicase N terminal domain FY142_06845 PF03796 DnaB-like helicase C terminal domain FY142_06845 PF14528 LAGLIDADG-like domain FY142_07010 PF03358 NADPH-dependent FMN reductase FY142_07015 PF02464 Competence-damaged protein FY142_07015 PF18146 Damage-inducible protein CinA KH domain FY142_07015 PF00994 Probable molybdopterin binding domain FY142_07020 PF00582 Universal stress protein family FY142_07025 PF00156 Phosphoribosyl transferase domain FY142_07035 PF02867 Ribonucleotide reductase, barrel domain FY142_07035 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY142_07050 PF01566 Natural resistance-associated macrophage protein FY142_07060 PF00664 ABC transporter transmembrane region FY142_07060 PF00005 ABC transporter FY142_07065 PF01594 AI-2E family transporter FY142_07070 PF00583 Acetyltransferase (GNAT) family FY142_07100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY142_07100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY142_07100 PF02824 TGS domain FY142_07100 PF03129 Anticodon binding domain FY142_07110 PF01809 Putative membrane protein insertion efficiency factor FY142_07120 PF01227 GTP cyclohydrolase I FY142_07125 PF01502 Phosphoribosyl-AMP cyclohydrolase FY142_07130 PF01734 Patatin-like phospholipase FY142_07140 PF00571 CBS domain FY142_07140 PF00478 IMP dehydrogenase / GMP reductase domain FY142_07175 PF03313 Serine dehydratase alpha chain FY142_07175 PF03315 Serine dehydratase beta chain FY142_07215 PF03466 LysR substrate binding domain FY142_07215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_07225 PF01965 DJ-1/PfpI family FY142_07225 PF12833 Helix-turn-helix domain FY142_07230 PF01256 Carbohydrate kinase FY142_07230 PF03853 YjeF-related protein N-terminus FY142_07240 PF00543 Nitrogen regulatory protein P-II FY142_07245 PF00120 Glutamine synthetase, catalytic domain FY142_07245 PF03951 Glutamine synthetase, beta-Grasp domain FY142_07255 PF08755 Hemimethylated DNA-binding protein YccV like FY142_07265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_07275 PF00892 EamA-like transporter family FY142_07285 PF00271 Helicase conserved C-terminal domain FY142_07285 PF00270 DEAD/DEAH box helicase FY142_07285 PF02559 CarD-like/TRCF domain FY142_07285 PF03461 TRCF domain FY142_07285 PF17757 UvrB interaction domain FY142_07295 PF00270 DEAD/DEAH box helicase FY142_07295 PF00271 Helicase conserved C-terminal domain FY142_07295 PF17191 RecG wedge domain FY142_07310 PF01850 PIN domain FY142_07325 PF01380 SIS domain FY142_07335 PF12804 MobA-like NTP transferase domain FY142_07335 PF14602 Hexapeptide repeat of succinyl-transferase FY142_07335 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_07340 PF00392 Bacterial regulatory proteins, gntR family FY142_07340 PF07729 FCD domain FY142_07345 PF02608 ABC transporter substrate-binding protein PnrA-like FY142_07350 PF02653 Branched-chain amino acid transport system / permease component FY142_07355 PF02653 Branched-chain amino acid transport system / permease component FY142_07360 PF00005 ABC transporter FY142_07370 PF01494 FAD binding domain FY142_07375 PF03547 Membrane transport protein FY142_07380 PF02683 Cytochrome C biogenesis protein transmembrane region FY142_07400 PF00313 'Cold-shock' DNA-binding domain FY142_07450 PF00005 ABC transporter FY142_07450 PF02687 FtsX-like permease family FY142_07450 PF12704 MacB-like periplasmic core domain FY142_07455 PF00005 ABC transporter FY142_07455 PF12704 MacB-like periplasmic core domain FY142_07455 PF02687 FtsX-like permease family FY142_07475 PF01521 Iron-sulphur cluster biosynthesis FY142_07480 PF01883 Iron-sulfur cluster assembly protein FY142_07485 PF00266 Aminotransferase class-V FY142_07490 PF01458 Uncharacterized protein family (UPF0051) FY142_07495 PF00005 ABC transporter FY142_07500 PF01458 Uncharacterized protein family (UPF0051) FY142_07505 PF00266 Aminotransferase class-V FY142_07510 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY142_07515 PF03702 Anhydro-N-acetylmuramic acid kinase FY142_07520 PF00579 tRNA synthetases class I (W and Y) FY142_07530 PF00578 AhpC/TSA family FY142_07535 PF04305 Protein of unknown function (DUF455) FY142_07540 PF01476 LysM domain FY142_07540 PF08525 Opacity-associated protein A N-terminal motif FY142_07540 PF01551 Peptidase family M23 FY142_07545 PF00270 DEAD/DEAH box helicase FY142_07545 PF00271 Helicase conserved C-terminal domain FY142_07560 PF00834 Ribulose-phosphate 3 epimerase family FY142_07570 PF10397 Adenylosuccinate lyase C-terminus FY142_07570 PF00206 Lyase FY142_07580 PF01259 SAICAR synthetase FY142_07585 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY142_07605 PF00155 Aminotransferase class I and II FY142_07605 PF00392 Bacterial regulatory proteins, gntR family FY142_07610 PF00586 AIR synthase related protein, N-terminal domain FY142_07610 PF02769 AIR synthase related protein, C-terminal domain FY142_07610 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY142_07630 PF00462 Glutaredoxin FY142_07635 PF07690 Major Facilitator Superfamily FY142_07640 PF00459 Inositol monophosphatase family FY142_07645 PF00459 Inositol monophosphatase family FY142_07650 PF01171 PP-loop family FY142_07655 PF04960 Glutaminase FY142_07660 PF00163 Ribosomal protein S4/S9 N-terminal domain FY142_07660 PF01479 S4 domain FY142_07665 PF03741 Integral membrane protein TerC family FY142_07675 PF00892 EamA-like transporter family FY142_07680 PF01810 LysE type translocator FY142_07690 PF01177 Asp/Glu/Hydantoin racemase FY142_07695 PF00588 SpoU rRNA Methylase family FY142_07705 PF00180 Isocitrate/isopropylmalate dehydrogenase FY142_07715 PF02272 DHHA1 domain FY142_07715 PF01411 tRNA synthetases class II (A) FY142_07715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY142_07720 PF00154 recA bacterial DNA recombination protein FY142_07725 PF00294 pfkB family carbohydrate kinase FY142_07730 PF04227 Indigoidine synthase A like protein FY142_07735 PF01389 OmpA-like transmembrane domain FY142_07735 PF00691 OmpA family FY142_07740 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_07745 PF00528 Binding-protein-dependent transport system inner membrane component FY142_07750 PF00528 Binding-protein-dependent transport system inner membrane component FY142_07755 PF06233 Usg-like family FY142_07760 PF08241 Methyltransferase domain FY142_07765 PF09084 NMT1/THI5 like FY142_07770 PF13404 AsnC-type helix-turn-helix domain FY142_07770 PF01037 Lrp/AsnC ligand binding domain FY142_07775 PF03167 Uracil DNA glycosylase superfamily FY142_07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_07785 PF00989 PAS fold FY142_07785 PF00512 His Kinase A (phospho-acceptor) domain FY142_07790 PF01219 Prokaryotic diacylglycerol kinase FY142_07795 PF02277 Phosphoribosyltransferase FY142_07800 PF02654 Cobalamin-5-phosphate synthase FY142_07815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY142_07820 PF01061 ABC-2 type transporter FY142_07825 PF00005 ABC transporter FY142_07830 PF01925 Sulfite exporter TauE/SafE FY142_07840 PF08269 Cache domain FY142_07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_07850 PF00004 ATPase family associated with various cellular activities (AAA) FY142_07850 PF16193 AAA C-terminal domain FY142_07850 PF12002 MgsA AAA+ ATPase C terminal FY142_07855 PF13180 PDZ domain FY142_07855 PF00595 PDZ domain FY142_07875 PF00920 Dehydratase family FY142_07880 PF00174 Oxidoreductase molybdopterin binding domain FY142_07885 PF01794 Ferric reductase like transmembrane component FY142_07895 PF05675 Protein of unknown function (DUF817) FY142_07900 PF01196 Ribosomal protein L17 FY142_07905 PF01000 RNA polymerase Rpb3/RpoA insert domain FY142_07905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY142_07905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY142_07910 PF00411 Ribosomal protein S11 FY142_07915 PF00416 Ribosomal protein S13/S18 FY142_07925 PF00344 SecY translocase FY142_07930 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY142_07935 PF00327 Ribosomal protein L30p/L7e FY142_07940 PF00333 Ribosomal protein S5, N-terminal domain FY142_07940 PF03719 Ribosomal protein S5, C-terminal domain FY142_07945 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY142_07950 PF00347 Ribosomal protein L6 FY142_07955 PF00410 Ribosomal protein S8 FY142_07960 PF00253 Ribosomal protein S14p/S29e FY142_07965 PF00281 Ribosomal protein L5 FY142_07965 PF00673 ribosomal L5P family C-terminus FY142_07970 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY142_07970 PF00467 KOW motif FY142_07975 PF00238 Ribosomal protein L14p/L23e FY142_07980 PF00366 Ribosomal protein S17 FY142_07985 PF00831 Ribosomal L29 protein FY142_07990 PF00252 Ribosomal protein L16p/L10e FY142_07995 PF07650 KH domain FY142_07995 PF00189 Ribosomal protein S3, C-terminal domain FY142_08000 PF00237 Ribosomal protein L22p/L17e FY142_08005 PF00203 Ribosomal protein S19 FY142_08010 PF00181 Ribosomal Proteins L2, RNA binding domain FY142_08010 PF03947 Ribosomal Proteins L2, C-terminal domain FY142_08015 PF00276 Ribosomal protein L23 FY142_08020 PF00573 Ribosomal protein L4/L1 family FY142_08025 PF00297 Ribosomal protein L3 FY142_08030 PF00338 Ribosomal protein S10p/S20e FY142_08035 PF03144 Elongation factor Tu domain 2 FY142_08035 PF03143 Elongation factor Tu C-terminal domain FY142_08035 PF00009 Elongation factor Tu GTP binding domain FY142_08040 PF00679 Elongation factor G C-terminus FY142_08040 PF14492 Elongation Factor G, domain II FY142_08040 PF03764 Elongation factor G, domain IV FY142_08040 PF00009 Elongation factor Tu GTP binding domain FY142_08040 PF03144 Elongation factor Tu domain 2 FY142_08045 PF00177 Ribosomal protein S7p/S5e FY142_08050 PF00164 Ribosomal protein S12/S23 FY142_08070 PF04998 RNA polymerase Rpb1, domain 5 FY142_08070 PF05000 RNA polymerase Rpb1, domain 4 FY142_08070 PF04983 RNA polymerase Rpb1, domain 3 FY142_08070 PF04997 RNA polymerase Rpb1, domain 1 FY142_08070 PF00623 RNA polymerase Rpb1, domain 2 FY142_08075 PF04560 RNA polymerase Rpb2, domain 7 FY142_08075 PF00562 RNA polymerase Rpb2, domain 6 FY142_08075 PF10385 RNA polymerase beta subunit external 1 domain FY142_08075 PF04561 RNA polymerase Rpb2, domain 2 FY142_08075 PF04563 RNA polymerase beta subunit FY142_08075 PF04565 RNA polymerase Rpb2, domain 3 FY142_08080 PF00542 Ribosomal protein L7/L12 C-terminal domain FY142_08080 PF16320 Ribosomal protein L7/L12 dimerisation domain FY142_08085 PF00466 Ribosomal protein L10 FY142_08090 PF00687 Ribosomal protein L1p/L10e family FY142_08095 PF00298 Ribosomal protein L11, RNA binding domain FY142_08095 PF03946 Ribosomal protein L11, N-terminal domain FY142_08100 PF00467 KOW motif FY142_08100 PF02357 Transcription termination factor nusG FY142_08105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY142_08115 PF08485 Polysaccharide biosynthesis protein C-terminal FY142_08115 PF02719 Polysaccharide biosynthesis protein FY142_08120 PF00009 Elongation factor Tu GTP binding domain FY142_08120 PF03144 Elongation factor Tu domain 2 FY142_08120 PF03143 Elongation factor Tu C-terminal domain FY142_08125 PF03741 Integral membrane protein TerC family FY142_08130 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY142_08150 PF00664 ABC transporter transmembrane region FY142_08150 PF00005 ABC transporter FY142_08190 PF04542 Sigma-70 region 2 FY142_08190 PF04545 Sigma-70, region 4 FY142_08200 PF02954 Bacterial regulatory protein, Fis family FY142_08200 PF00072 Response regulator receiver domain FY142_08200 PF00158 Sigma-54 interaction domain FY142_08205 PF00072 Response regulator receiver domain FY142_08205 PF08769 Sporulation initiation factor Spo0A C terminal FY142_08210 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_08210 PF00072 Response regulator receiver domain FY142_08210 PF01627 Hpt domain FY142_08210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_08210 PF00512 His Kinase A (phospho-acceptor) domain FY142_08215 PF00072 Response regulator receiver domain FY142_08220 PF13426 PAS domain FY142_08220 PF08447 PAS fold FY142_08220 PF07536 HWE histidine kinase FY142_08225 PF00072 Response regulator receiver domain FY142_08230 PF00360 Phytochrome region FY142_08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_08230 PF01590 GAF domain FY142_08230 PF08446 PAS fold FY142_08230 PF00512 His Kinase A (phospho-acceptor) domain FY142_08245 PF00588 SpoU rRNA Methylase family FY142_08245 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY142_08250 PF03061 Thioesterase superfamily FY142_08270 PF13460 NAD(P)H-binding FY142_08275 PF01638 HxlR-like helix-turn-helix FY142_08290 PF00271 Helicase conserved C-terminal domain FY142_08290 PF04851 Type III restriction enzyme, res subunit FY142_08290 PF02151 UvrB/uvrC motif FY142_08290 PF12344 Ultra-violet resistance protein B FY142_08290 PF17757 UvrB interaction domain FY142_08300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY142_08300 PF00756 Putative esterase FY142_08320 PF00226 DnaJ domain FY142_08320 PF01556 DnaJ C terminal domain FY142_08320 PF00684 DnaJ central domain FY142_08340 PF00990 Diguanylate cyclase, GGDEF domain FY142_08340 PF17151 Periplasmic sensor domain FY142_08350 PF00005 ABC transporter FY142_08350 PF08402 TOBE domain FY142_08360 PF01547 Bacterial extracellular solute-binding protein FY142_08365 PF00155 Aminotransferase class I and II FY142_08370 PF05025 RbsD / FucU transport protein family FY142_08380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY142_08380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY142_08385 PF00440 Bacterial regulatory proteins, tetR family FY142_08390 PF12833 Helix-turn-helix domain FY142_08390 PF06719 AraC-type transcriptional regulator N-terminus FY142_08395 PF08240 Alcohol dehydrogenase GroES-like domain FY142_08395 PF00107 Zinc-binding dehydrogenase FY142_08400 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_08405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY142_08410 PF03472 Autoinducer binding domain FY142_08410 PF00196 Bacterial regulatory proteins, luxR family FY142_08415 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY142_08415 PF14490 Helix-hairpin-helix containing domain FY142_08415 PF13538 UvrD-like helicase C-terminal domain FY142_08435 PF04542 Sigma-70 region 2 FY142_08435 PF08281 Sigma-70, region 4 FY142_08450 PF00248 Aldo/keto reductase family FY142_08465 PF10369 Small subunit of acetolactate synthase FY142_08470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY142_08470 PF00205 Thiamine pyrophosphate enzyme, central domain FY142_08470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY142_08490 PF13302 Acetyltransferase (GNAT) domain FY142_08500 PF13180 PDZ domain FY142_08505 PF01145 SPFH domain / Band 7 family FY142_08510 PF01145 SPFH domain / Band 7 family FY142_08515 PF00186 Dihydrofolate reductase FY142_08520 PF00303 Thymidylate synthase FY142_08555 PF02913 FAD linked oxidases, C-terminal domain FY142_08555 PF01565 FAD binding domain FY142_08560 PF00873 AcrB/AcrD/AcrF family FY142_08565 PF13533 Biotin-lipoyl like FY142_08575 PF00580 UvrD/REP helicase N-terminal domain FY142_08575 PF13361 UvrD-like helicase C-terminal domain FY142_08600 PF00857 Isochorismatase family FY142_08620 PF00557 Metallopeptidase family M24 FY142_08620 PF01321 Creatinase/Prolidase N-terminal domain FY142_08630 PF02630 SCO1/SenC FY142_08640 PF01584 CheW-like domain FY142_08650 PF00929 Exonuclease FY142_08655 PF03466 LysR substrate binding domain FY142_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_08665 PF00583 Acetyltransferase (GNAT) family FY142_08670 PF01636 Phosphotransferase enzyme family FY142_08675 PF01653 NAD-dependent DNA ligase adenylation domain FY142_08675 PF12826 Helix-hairpin-helix motif FY142_08675 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY142_08675 PF03120 NAD-dependent DNA ligase OB-fold domain FY142_08675 PF00533 BRCA1 C Terminus (BRCT) domain FY142_08680 PF02463 RecF/RecN/SMC N terminal domain FY142_08685 PF13525 Outer membrane lipoprotein FY142_08690 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY142_08695 PF12327 FtsZ family, C-terminal domain FY142_08695 PF00091 Tubulin/FtsZ family, GTPase domain FY142_08700 PF02491 SHS2 domain inserted in FTSA FY142_08705 PF08478 POTRA domain, FtsQ-type FY142_08705 PF03799 Cell division protein FtsQ FY142_08710 PF07478 D-ala D-ala ligase C-terminus FY142_08710 PF01820 D-ala D-ala ligase N-terminus FY142_08715 PF07690 Major Facilitator Superfamily FY142_08715 PF00083 Sugar (and other) transporter FY142_08720 PF00563 EAL domain FY142_08720 PF00990 Diguanylate cyclase, GGDEF domain FY142_08725 PF01565 FAD binding domain FY142_08725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY142_08730 PF08245 Mur ligase middle domain FY142_08730 PF01225 Mur ligase family, catalytic domain FY142_08730 PF02875 Mur ligase family, glutamate ligase domain FY142_08735 PF04101 Glycosyltransferase family 28 C-terminal domain FY142_08735 PF03033 Glycosyltransferase family 28 N-terminal domain FY142_08740 PF01098 Cell cycle protein FY142_08745 PF02875 Mur ligase family, glutamate ligase domain FY142_08745 PF08245 Mur ligase middle domain FY142_08750 PF00953 Glycosyl transferase family 4 FY142_08750 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY142_08755 PF01225 Mur ligase family, catalytic domain FY142_08755 PF02875 Mur ligase family, glutamate ligase domain FY142_08755 PF08245 Mur ligase middle domain FY142_08760 PF08245 Mur ligase middle domain FY142_08760 PF01225 Mur ligase family, catalytic domain FY142_08760 PF02875 Mur ligase family, glutamate ligase domain FY142_08765 PF03717 Penicillin-binding Protein dimerisation domain FY142_08765 PF00905 Penicillin binding protein transpeptidase domain FY142_08775 PF01795 MraW methylase family FY142_08780 PF02381 MraZ protein, putative antitoxin-like FY142_08805 PF01510 N-acetylmuramoyl-L-alanine amidase FY142_08810 PF00226 DnaJ domain FY142_08810 PF05099 Tellurite resistance protein TerB FY142_08815 PF00365 Phosphofructokinase FY142_08835 PF13649 Methyltransferase domain FY142_08840 PF01183 Glycosyl hydrolases family 25 FY142_08850 PF02219 Methylenetetrahydrofolate reductase FY142_08855 PF01209 ubiE/COQ5 methyltransferase family FY142_08860 PF12848 ABC transporter FY142_08860 PF00005 ABC transporter FY142_08865 PF12146 Serine aminopeptidase, S33 FY142_08870 PF02515 CoA-transferase family III FY142_08875 PF00205 Thiamine pyrophosphate enzyme, central domain FY142_08875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY142_08875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY142_08885 PF01042 Endoribonuclease L-PSP FY142_08900 PF01476 LysM domain FY142_08900 PF03734 L,D-transpeptidase catalytic domain FY142_08905 PF07690 Major Facilitator Superfamily FY142_08925 PF10609 NUBPL iron-transfer P-loop NTPase FY142_08930 PF00465 Iron-containing alcohol dehydrogenase FY142_08935 PF00171 Aldehyde dehydrogenase family FY142_08940 PF03951 Glutamine synthetase, beta-Grasp domain FY142_08940 PF00120 Glutamine synthetase, catalytic domain FY142_08945 PF13520 Amino acid permease FY142_08955 PF01418 Helix-turn-helix domain, rpiR family FY142_08955 PF01380 SIS domain FY142_08960 PF13416 Bacterial extracellular solute-binding protein FY142_08975 PF00005 ABC transporter FY142_08975 PF08402 TOBE domain FY142_08980 PF00107 Zinc-binding dehydrogenase FY142_08980 PF08240 Alcohol dehydrogenase GroES-like domain FY142_08995 PF07690 Major Facilitator Superfamily FY142_09000 PF02607 B12 binding domain FY142_09000 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY142_09000 PF00809 Pterin binding enzyme FY142_09000 PF02574 Homocysteine S-methyltransferase FY142_09000 PF02310 B12 binding domain FY142_09020 PF13505 Outer membrane protein beta-barrel domain FY142_09035 PF04402 Protein of unknown function (DUF541) FY142_09045 PF01894 Uncharacterised protein family UPF0047 FY142_09050 PF00360 Phytochrome region FY142_09050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_09050 PF01590 GAF domain FY142_09050 PF08446 PAS fold FY142_09050 PF00512 His Kinase A (phospho-acceptor) domain FY142_09060 PF04546 Sigma-70, non-essential region FY142_09060 PF03979 Sigma-70 factor, region 1.1 FY142_09060 PF00140 Sigma-70 factor, region 1.2 FY142_09060 PF04542 Sigma-70 region 2 FY142_09060 PF04539 Sigma-70 region 3 FY142_09060 PF04545 Sigma-70, region 4 FY142_09065 PF01807 CHC2 zinc finger FY142_09065 PF08275 DNA primase catalytic core, N-terminal domain FY142_09065 PF10410 DnaB-helicase binding domain of primase FY142_09065 PF08278 DNA primase DnaG DnaB-binding FY142_09085 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY142_09085 PF00117 Glutamine amidotransferase class-I FY142_09090 PF01554 MatE FY142_09095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_09095 PF00672 HAMP domain FY142_09095 PF02743 Cache domain FY142_09105 PF04228 Putative neutral zinc metallopeptidase FY142_09120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_09120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY142_09120 PF02142 MGS-like domain FY142_09130 PF07694 5TMR of 5TMR-LYT FY142_09130 PF00990 Diguanylate cyclase, GGDEF domain FY142_09145 PF01272 Transcription elongation factor, GreA/GreB, C-term FY142_09145 PF03449 Transcription elongation factor, N-terminal FY142_09150 PF00534 Glycosyl transferases group 1 FY142_09155 PF01037 Lrp/AsnC ligand binding domain FY142_09160 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_09165 PF03466 LysR substrate binding domain FY142_09175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY142_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_09190 PF03466 LysR substrate binding domain FY142_09200 PF01699 Sodium/calcium exchanger protein FY142_09205 PF00155 Aminotransferase class I and II FY142_09210 PF00563 EAL domain FY142_09210 PF05231 MASE1 FY142_09225 PF00313 'Cold-shock' DNA-binding domain FY142_09230 PF00753 Metallo-beta-lactamase superfamily FY142_09240 PF12802 MarR family FY142_09245 PF00486 Transcriptional regulatory protein, C terminal FY142_09245 PF00072 Response regulator receiver domain FY142_09250 PF00672 HAMP domain FY142_09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_09250 PF00512 His Kinase A (phospho-acceptor) domain FY142_09255 PF01588 Putative tRNA binding domain FY142_09260 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY142_09260 PF03807 NADP oxidoreductase coenzyme F420-dependent FY142_09275 PF01790 Prolipoprotein diacylglyceryl transferase FY142_09285 PF02578 Multi-copper polyphenol oxidoreductase laccase FY142_09300 PF14572 Phosphoribosyl synthetase-associated domain FY142_09300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY142_09310 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY142_09320 PF00535 Glycosyl transferase family 2 FY142_09325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_09325 PF00672 HAMP domain FY142_09330 PF00171 Aldehyde dehydrogenase family FY142_09335 PF02954 Bacterial regulatory protein, Fis family FY142_09340 PF03707 Bacterial signalling protein N terminal repeat FY142_09340 PF13188 PAS domain FY142_09340 PF00563 EAL domain FY142_09340 PF00990 Diguanylate cyclase, GGDEF domain FY142_09345 PF14693 Ribosomal protein TL5, C-terminal domain FY142_09345 PF01386 Ribosomal L25p family FY142_09350 PF00563 EAL domain FY142_09350 PF00990 Diguanylate cyclase, GGDEF domain FY142_09350 PF08448 PAS fold FY142_09350 PF08447 PAS fold FY142_09360 PF01195 Peptidyl-tRNA hydrolase FY142_09370 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY142_09375 PF06071 Protein of unknown function (DUF933) FY142_09375 PF01926 50S ribosome-binding GTPase FY142_09395 PF00156 Phosphoribosyl transferase domain FY142_09405 PF00033 Cytochrome b/b6/petB FY142_09405 PF02167 Cytochrome C1 family FY142_09405 PF00032 Cytochrome b(C-terminal)/b6/petD FY142_09410 PF00032 Cytochrome b(C-terminal)/b6/petD FY142_09410 PF00033 Cytochrome b/b6/petB FY142_09415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY142_09415 PF00355 Rieske [2Fe-2S] domain FY142_09425 PF00664 ABC transporter transmembrane region FY142_09425 PF00005 ABC transporter FY142_09435 PF00005 ABC transporter FY142_09435 PF00664 ABC transporter transmembrane region FY142_09445 PF00588 SpoU rRNA Methylase family FY142_09450 PF02690 Na+/Pi-cotransporter FY142_09460 PF01218 Coproporphyrinogen III oxidase FY142_09475 PF01743 Poly A polymerase head domain FY142_09475 PF12627 Probable RNA and SrmB- binding site of polymerase A FY142_09475 PF13735 tRNA nucleotidyltransferase domain 2 putative FY142_09480 PF00293 NUDIX domain FY142_09490 PF07726 ATPase family associated with various cellular activities (AAA) FY142_09490 PF17863 AAA lid domain FY142_09510 PF00583 Acetyltransferase (GNAT) family FY142_09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_09515 PF03466 LysR substrate binding domain FY142_09525 PF07690 Major Facilitator Superfamily FY142_09535 PF13409 Glutathione S-transferase, N-terminal domain FY142_09540 PF00293 NUDIX domain FY142_09550 PF00682 HMGL-like FY142_09550 PF08502 LeuA allosteric (dimerisation) domain FY142_09555 PF03594 Benzoate membrane transport protein FY142_09570 PF04542 Sigma-70 region 2 FY142_09570 PF04545 Sigma-70, region 4 FY142_09580 PF00574 Clp protease FY142_09585 PF04955 HupE / UreJ protein FY142_09595 PF14489 QueF-like protein FY142_09600 PF01545 Cation efflux family FY142_09600 PF16916 Dimerisation domain of Zinc Transporter FY142_09610 PF13458 Periplasmic binding protein FY142_09620 PF01022 Bacterial regulatory protein, arsR family FY142_09625 PF00005 ABC transporter FY142_09625 PF00571 CBS domain FY142_09630 PF00528 Binding-protein-dependent transport system inner membrane component FY142_09635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY142_09645 PF00265 Thymidine kinase FY142_09650 PF00127 Copper binding proteins, plastocyanin/azurin family FY142_09660 PF03472 Autoinducer binding domain FY142_09660 PF00196 Bacterial regulatory proteins, luxR family FY142_09665 PF03350 Uncharacterized protein family, UPF0114 FY142_09670 PF07715 TonB-dependent Receptor Plug Domain FY142_09670 PF04886 PT repeat FY142_09670 PF00593 TonB dependent receptor FY142_09680 PF04715 Anthranilate synthase component I, N terminal region FY142_09680 PF00425 chorismate binding enzyme FY142_09680 PF00117 Glutamine amidotransferase class-I FY142_09690 PF11871 Domain of unknown function (DUF3391) FY142_09690 PF01966 HD domain FY142_09695 PF01979 Amidohydrolase family FY142_09695 PF13382 Adenine deaminase C-terminal domain FY142_09700 PF00583 Acetyltransferase (GNAT) family FY142_09705 PF00128 Alpha amylase, catalytic domain FY142_09710 PF00294 pfkB family carbohydrate kinase FY142_09730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY142_09730 PF01926 50S ribosome-binding GTPase FY142_09750 PF05992 SbmA/BacA-like family FY142_09760 PF00557 Metallopeptidase family M24 FY142_09775 PF01799 [2Fe-2S] binding domain FY142_09775 PF00111 2Fe-2S iron-sulfur cluster binding domain FY142_09780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY142_09780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY142_09790 PF03466 LysR substrate binding domain FY142_09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_09805 PF01979 Amidohydrolase family FY142_09815 PF01070 FMN-dependent dehydrogenase FY142_09820 PF00893 Small Multidrug Resistance protein FY142_09825 PF17932 Tetracyclin repressor-like, C-terminal domain FY142_09825 PF00440 Bacterial regulatory proteins, tetR family FY142_09830 PF07943 Penicillin-binding protein 5, C-terminal domain FY142_09830 PF00768 D-alanyl-D-alanine carboxypeptidase FY142_09840 PF00576 HIUase/Transthyretin family FY142_09845 PF04115 Ureidoglycolate lyase FY142_09860 PF01014 Uricase FY142_09860 PF09349 OHCU decarboxylase FY142_09870 PF06299 Protein of unknown function (DUF1045) FY142_09875 PF01266 FAD dependent oxidoreductase FY142_09880 PF01266 FAD dependent oxidoreductase FY142_09880 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY142_09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_09885 PF00672 HAMP domain FY142_09885 PF00072 Response regulator receiver domain FY142_09885 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY142_09885 PF01627 Hpt domain FY142_09885 PF00512 His Kinase A (phospho-acceptor) domain FY142_09890 PF00270 DEAD/DEAH box helicase FY142_09890 PF00271 Helicase conserved C-terminal domain FY142_09900 PF07681 DoxX FY142_09905 PF01476 LysM domain FY142_09905 PF03734 L,D-transpeptidase catalytic domain FY142_09915 PF14403 Circularly permuted ATP-grasp type 2 FY142_09925 PF01841 Transglutaminase-like superfamily FY142_09925 PF08379 Bacterial transglutaminase-like N-terminal region FY142_09950 PF02653 Branched-chain amino acid transport system / permease component FY142_09955 PF00005 ABC transporter FY142_09960 PF13407 Periplasmic binding protein domain FY142_09965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_09965 PF03466 LysR substrate binding domain FY142_10015 PF03743 Bacterial conjugation TrbI-like protein FY142_10025 PF04335 VirB8 protein FY142_10030 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY142_10045 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY142_10060 PF00437 Type II/IV secretion system protein FY142_10070 PF02534 Type IV secretory system Conjugative DNA transfer FY142_10080 PF01381 Helix-turn-helix FY142_10085 PF03466 LysR substrate binding domain FY142_10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_10090 PF02321 Outer membrane efflux protein FY142_10095 PF13533 Biotin-lipoyl like FY142_10110 PF12833 Helix-turn-helix domain FY142_10110 PF02311 AraC-like ligand binding domain FY142_10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_10125 PF03466 LysR substrate binding domain FY142_10135 PF00753 Metallo-beta-lactamase superfamily FY142_10135 PF10996 Beta-Casp domain FY142_10135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY142_10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_10150 PF03466 LysR substrate binding domain FY142_10160 PF01464 Transglycosylase SLT domain FY142_10185 PF13614 AAA domain FY142_10205 PF06067 Domain of unknown function (DUF932) FY142_10220 PF07690 Major Facilitator Superfamily FY142_10225 PF03466 LysR substrate binding domain FY142_10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_10230 PF05284 Protein of unknown function (DUF736) FY142_10245 PF02463 RecF/RecN/SMC N terminal domain FY142_10275 PF00271 Helicase conserved C-terminal domain FY142_10290 PF16124 RecQ zinc-binding FY142_10290 PF09382 RQC domain FY142_10290 PF00270 DEAD/DEAH box helicase FY142_10290 PF00570 HRDC domain FY142_10290 PF00271 Helicase conserved C-terminal domain FY142_10295 PF02661 Fic/DOC family FY142_10295 PF13784 Fic/DOC family N-terminal FY142_10310 PF03358 NADPH-dependent FMN reductase FY142_10315 PF00561 alpha/beta hydrolase fold FY142_10335 PF13533 Biotin-lipoyl like FY142_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_10340 PF03466 LysR substrate binding domain FY142_10345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY142_10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_10350 PF03466 LysR substrate binding domain FY142_10365 PF00857 Isochorismatase family FY142_10370 PF03466 LysR substrate binding domain FY142_10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_10375 PF00004 ATPase family associated with various cellular activities (AAA) FY142_10375 PF17862 AAA+ lid domain FY142_10375 PF01434 Peptidase family M41 FY142_10385 PF00665 Integrase core domain FY142_10390 PF01695 IstB-like ATP binding protein FY142_10400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_10400 PF00672 HAMP domain FY142_10405 PF07690 Major Facilitator Superfamily FY142_10415 PF00809 Pterin binding enzyme FY142_10415 PF02310 B12 binding domain FY142_10415 PF02574 Homocysteine S-methyltransferase FY142_10415 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY142_10415 PF02607 B12 binding domain FY142_10420 PF00528 Binding-protein-dependent transport system inner membrane component FY142_10425 PF00528 Binding-protein-dependent transport system inner membrane component FY142_10430 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_10435 PF00005 ABC transporter FY142_10455 PF00331 Glycosyl hydrolase family 10 FY142_10460 PF00535 Glycosyl transferase family 2 FY142_10475 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY142_10490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY142_10490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY142_10490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY142_10490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY142_10505 PF01152 Bacterial-like globin FY142_10525 PF00440 Bacterial regulatory proteins, tetR family FY142_10525 PF08362 YcdC-like protein, C-terminal region FY142_10530 PF07687 Peptidase dimerisation domain FY142_10530 PF01546 Peptidase family M20/M25/M40 FY142_10535 PF01979 Amidohydrolase family FY142_10540 PF00293 NUDIX domain FY142_10545 PF00005 ABC transporter FY142_10550 PF00528 Binding-protein-dependent transport system inner membrane component FY142_10555 PF00528 Binding-protein-dependent transport system inner membrane component FY142_10570 PF00873 AcrB/AcrD/AcrF family FY142_10585 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY142_10590 PF01730 UreF FY142_10595 PF02814 UreE urease accessory protein, N-terminal domain FY142_10595 PF05194 UreE urease accessory protein, C-terminal domain FY142_10600 PF08534 Redoxin FY142_10610 PF01979 Amidohydrolase family FY142_10610 PF00449 Urease alpha-subunit, N-terminal domain FY142_10620 PF07007 Lysozyme inhibitor LprI FY142_10630 PF00699 Urease beta subunit FY142_10635 PF06906 Protein of unknown function (DUF1272) FY142_10640 PF00547 Urease, gamma subunit FY142_10645 PF01774 UreD urease accessory protein FY142_10655 PF00005 ABC transporter FY142_10665 PF00005 ABC transporter FY142_10665 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_10675 PF02653 Branched-chain amino acid transport system / permease component FY142_10685 PF10931 Protein of unknown function (DUF2735) FY142_10690 PF03951 Glutamine synthetase, beta-Grasp domain FY142_10690 PF00120 Glutamine synthetase, catalytic domain FY142_10700 PF01627 Hpt domain FY142_10700 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY142_10700 PF00989 PAS fold FY142_10700 PF00072 Response regulator receiver domain FY142_10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_10700 PF00512 His Kinase A (phospho-acceptor) domain FY142_10705 PF00072 Response regulator receiver domain FY142_10715 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY142_10715 PF01522 Polysaccharide deacetylase FY142_10720 PF13458 Periplasmic binding protein FY142_10730 PF00005 ABC transporter FY142_10735 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_10735 PF00005 ABC transporter FY142_10740 PF02653 Branched-chain amino acid transport system / permease component FY142_10740 PF11862 Domain of unknown function (DUF3382) FY142_10745 PF02653 Branched-chain amino acid transport system / permease component FY142_10750 PF00459 Inositol monophosphatase family FY142_10780 PF00072 Response regulator receiver domain FY142_10780 PF00486 Transcriptional regulatory protein, C terminal FY142_10800 PF10090 Histidine phosphotransferase C-terminal domain FY142_10815 PF00588 SpoU rRNA Methylase family FY142_10825 PF00849 RNA pseudouridylate synthase FY142_10835 PF04545 Sigma-70, region 4 FY142_10835 PF00140 Sigma-70 factor, region 1.2 FY142_10835 PF04542 Sigma-70 region 2 FY142_10845 PF00709 Adenylosuccinate synthetase FY142_10870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_10880 PF03167 Uracil DNA glycosylase superfamily FY142_10885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_10890 PF04304 Protein of unknown function (DUF454) FY142_10895 PF00005 ABC transporter FY142_10900 PF01032 FecCD transport family FY142_10905 PF01497 Periplasmic binding protein FY142_10915 PF06228 Haem utilisation ChuX/HutX FY142_10930 PF13443 Cro/C1-type HTH DNA-binding domain FY142_10940 PF00551 Formyl transferase FY142_10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_10955 PF00672 HAMP domain FY142_10955 PF00512 His Kinase A (phospho-acceptor) domain FY142_10960 PF00072 Response regulator receiver domain FY142_10960 PF00486 Transcriptional regulatory protein, C terminal FY142_10970 PF03401 Tripartite tricarboxylate transporter family receptor FY142_10980 PF01970 Tripartite tricarboxylate transporter TctA family FY142_10995 PF01032 FecCD transport family FY142_11000 PF01032 FecCD transport family FY142_11005 PF00005 ABC transporter FY142_11010 PF00210 Ferritin-like domain FY142_11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_11025 PF00672 HAMP domain FY142_11030 PF00248 Aldo/keto reductase family FY142_11035 PF07690 Major Facilitator Superfamily FY142_11040 PF03466 LysR substrate binding domain FY142_11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_11045 PF03466 LysR substrate binding domain FY142_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_11050 PF07859 alpha/beta hydrolase fold FY142_11055 PF13533 Biotin-lipoyl like FY142_11060 PF00873 AcrB/AcrD/AcrF family FY142_11075 PF13091 PLD-like domain FY142_11075 PF13396 Phospholipase_D-nuclease N-terminal FY142_11080 PF08543 Phosphomethylpyrimidine kinase FY142_11085 PF00484 Carbonic anhydrase FY142_11095 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY142_11095 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY142_11105 PF00083 Sugar (and other) transporter FY142_11110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY142_11110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY142_11110 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY142_11115 PF02233 NAD(P) transhydrogenase beta subunit FY142_11120 PF01613 Flavin reductase like domain FY142_11125 PF00881 Nitroreductase family FY142_11130 PF00561 alpha/beta hydrolase fold FY142_11135 PF01042 Endoribonuclease L-PSP FY142_11140 PF00857 Isochorismatase family FY142_11145 PF00296 Luciferase-like monooxygenase FY142_11150 PF01126 Heme oxygenase FY142_11155 PF00701 Dihydrodipicolinate synthetase family FY142_11160 PF00392 Bacterial regulatory proteins, gntR family FY142_11160 PF07729 FCD domain FY142_11170 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11175 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11180 PF00005 ABC transporter FY142_11180 PF17912 MalK OB fold domain FY142_11180 PF03459 TOBE domain FY142_11185 PF00294 pfkB family carbohydrate kinase FY142_11190 PF03576 Peptidase family S58 FY142_11195 PF01063 Amino-transferase class IV FY142_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_11200 PF03466 LysR substrate binding domain FY142_11205 PF00144 Beta-lactamase FY142_11210 PF00005 ABC transporter FY142_11210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_11215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_11215 PF00005 ABC transporter FY142_11220 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11220 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_11225 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_11235 PF01244 Membrane dipeptidase (Peptidase family M19) FY142_11245 PF03706 Lysylphosphatidylglycerol synthase TM region FY142_11245 PF09924 Uncharacterised conserved protein (DUF2156) FY142_11260 PF07690 Major Facilitator Superfamily FY142_11270 PF04444 Catechol dioxygenase N terminus FY142_11270 PF00775 Dioxygenase FY142_11275 PF00465 Iron-containing alcohol dehydrogenase FY142_11280 PF04909 Amidohydrolase FY142_11285 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY142_11285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_11290 PF01613 Flavin reductase like domain FY142_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_11310 PF00512 His Kinase A (phospho-acceptor) domain FY142_11315 PF00072 Response regulator receiver domain FY142_11315 PF00486 Transcriptional regulatory protein, C terminal FY142_11325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY142_11330 PF08402 TOBE domain FY142_11330 PF00005 ABC transporter FY142_11335 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11350 PF00072 Response regulator receiver domain FY142_11350 PF00486 Transcriptional regulatory protein, C terminal FY142_11355 PF13188 PAS domain FY142_11355 PF00072 Response regulator receiver domain FY142_11355 PF08448 PAS fold FY142_11355 PF00512 His Kinase A (phospho-acceptor) domain FY142_11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_11360 PF00202 Aminotransferase class-III FY142_11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_11365 PF03466 LysR substrate binding domain FY142_11370 PF00313 'Cold-shock' DNA-binding domain FY142_11410 PF01259 SAICAR synthetase FY142_11415 PF00440 Bacterial regulatory proteins, tetR family FY142_11420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_11420 PF00529 HlyD membrane-fusion protein of T1SS FY142_11425 PF00873 AcrB/AcrD/AcrF family FY142_11430 PF02321 Outer membrane efflux protein FY142_11435 PF01132 Elongation factor P (EF-P) OB domain FY142_11435 PF08207 Elongation factor P (EF-P) KOW-like domain FY142_11435 PF09285 Elongation factor P, C-terminal FY142_11440 PF00152 tRNA synthetases class II (D, K and N) FY142_11445 PF12544 Lysine-2,3-aminomutase FY142_11445 PF04055 Radical SAM superfamily FY142_11460 PF03466 LysR substrate binding domain FY142_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_11465 PF01266 FAD dependent oxidoreductase FY142_11475 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11480 PF00005 ABC transporter FY142_11480 PF03459 TOBE domain FY142_11490 PF03576 Peptidase family S58 FY142_11495 PF05690 Thiazole biosynthesis protein ThiG FY142_11505 PF01266 FAD dependent oxidoreductase FY142_11510 PF13667 ThiC-associated domain FY142_11510 PF01964 Radical SAM ThiC family FY142_11520 PF00550 Phosphopantetheine attachment site FY142_11550 PF00664 ABC transporter transmembrane region FY142_11550 PF00005 ABC transporter FY142_11555 PF00027 Cyclic nucleotide-binding domain FY142_11555 PF13545 Crp-like helix-turn-helix domain FY142_11565 PF00211 Adenylate and Guanylate cyclase catalytic domain FY142_11565 PF00672 HAMP domain FY142_11575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY142_11575 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY142_11575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY142_11580 PF13439 Glycosyltransferase Family 4 FY142_11580 PF00534 Glycosyl transferases group 1 FY142_11595 PF00005 ABC transporter FY142_11595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_11600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_11605 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11610 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_11610 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11625 PF04101 Glycosyltransferase family 28 C-terminal domain FY142_11625 PF03033 Glycosyltransferase family 28 N-terminal domain FY142_11630 PF03932 CutC family FY142_11635 PF07690 Major Facilitator Superfamily FY142_11645 PF02838 Glycosyl hydrolase family 20, domain 2 FY142_11645 PF00728 Glycosyl hydrolase family 20, catalytic domain FY142_11655 PF01418 Helix-turn-helix domain, rpiR family FY142_11655 PF01380 SIS domain FY142_11665 PF17912 MalK OB fold domain FY142_11665 PF00005 ABC transporter FY142_11670 PF01547 Bacterial extracellular solute-binding protein FY142_11675 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11680 PF00528 Binding-protein-dependent transport system inner membrane component FY142_11695 PF00392 Bacterial regulatory proteins, gntR family FY142_11695 PF07702 UTRA domain FY142_11700 PF01380 SIS domain FY142_11705 PF01979 Amidohydrolase family FY142_11710 PF00480 ROK family FY142_11715 PF01494 FAD binding domain FY142_11720 PF01569 PAP2 superfamily FY142_11725 PF13288 DXP reductoisomerase C-terminal domain FY142_11725 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY142_11725 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY142_11730 PF00155 Aminotransferase class I and II FY142_11740 PF01103 Surface antigen FY142_11740 PF17243 POTRA domain TamA domain 1 FY142_11740 PF07244 Surface antigen variable number repeat FY142_11750 PF01584 CheW-like domain FY142_11755 PF08447 PAS fold FY142_11755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_11755 PF13426 PAS domain FY142_11760 PF02634 FdhD/NarQ family FY142_11765 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY142_11770 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY142_11770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY142_11775 PF00231 ATP synthase FY142_11780 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY142_11780 PF00306 ATP synthase alpha/beta chain, C terminal domain FY142_11780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY142_11785 PF00213 ATP synthase delta (OSCP) subunit FY142_11795 PF17764 3′ DNA-binding domain (3′BD) FY142_11795 PF18074 Primosomal protein N C-terminal domain FY142_11795 PF00270 DEAD/DEAH box helicase FY142_11795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY142_11800 PF02899 Phage integrase, N-terminal SAM-like domain FY142_11800 PF00589 Phage integrase family FY142_11820 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_11820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY142_11825 PF01810 LysE type translocator FY142_11835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY142_11835 PF00364 Biotin-requiring enzyme FY142_11835 PF02817 e3 binding domain FY142_11840 PF16078 2-oxoglutarate dehydrogenase N-terminus FY142_11840 PF00676 Dehydrogenase E1 component FY142_11840 PF16870 2-oxoglutarate dehydrogenase C-terminal FY142_11840 PF02779 Transketolase, pyrimidine binding domain FY142_11845 PF02629 CoA binding domain FY142_11845 PF00549 CoA-ligase FY142_11850 PF00549 CoA-ligase FY142_11850 PF08442 ATP-grasp domain FY142_11855 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY142_11855 PF00056 lactate/malate dehydrogenase, NAD binding domain FY142_11860 PF03969 AFG1-like ATPase FY142_11865 PF02974 Protease inhibitor Inh FY142_11870 PF13085 2Fe-2S iron-sulfur cluster binding domain FY142_11870 PF13237 4Fe-4S dicluster domain FY142_11875 PF00890 FAD binding domain FY142_11875 PF02910 Fumarate reductase flavoprotein C-term FY142_11885 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY142_11910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY142_11910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY142_11915 PF00814 Glycoprotease family FY142_11920 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY142_11920 PF03900 Porphobilinogen deaminase, C-terminal domain FY142_11945 PF00117 Glutamine amidotransferase class-I FY142_11955 PF02325 YGGT family FY142_11960 PF02594 Uncharacterised ACR, YggU family COG1872 FY142_11965 PF00719 Inorganic pyrophosphatase FY142_11975 PF00679 Elongation factor G C-terminus FY142_11975 PF00009 Elongation factor Tu GTP binding domain FY142_11975 PF03144 Elongation factor Tu domain 2 FY142_11980 PF01432 Peptidase family M3 FY142_11985 PF01047 MarR family FY142_11990 PF07690 Major Facilitator Superfamily FY142_11995 PF00764 Arginosuccinate synthase FY142_12000 PF00106 short chain dehydrogenase FY142_12005 PF01810 LysE type translocator FY142_12010 PF00005 ABC transporter FY142_12015 PF02653 Branched-chain amino acid transport system / permease component FY142_12025 PF04055 Radical SAM superfamily FY142_12040 PF01329 Pterin 4 alpha carbinolamine dehydratase FY142_12045 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY142_12050 PF02834 LigT like Phosphoesterase FY142_12055 PF13472 GDSL-like Lipase/Acylhydrolase family FY142_12060 PF00005 ABC transporter FY142_12070 PF01027 Inhibitor of apoptosis-promoting Bax1 FY142_12085 PF00694 Aconitase C-terminal domain FY142_12085 PF00330 Aconitase family (aconitate hydratase) FY142_12090 PF00005 ABC transporter FY142_12095 PF03379 CcmB protein FY142_12100 PF01578 Cytochrome C assembly protein FY142_12110 PF08534 Redoxin FY142_12115 PF00990 Diguanylate cyclase, GGDEF domain FY142_12120 PF10755 Protein of unknown function (DUF2585) FY142_12125 PF04279 Intracellular septation protein A FY142_12130 PF00448 SRP54-type protein, GTPase domain FY142_12130 PF02881 SRP54-type protein, helical bundle domain FY142_12135 PF00919 Uncharacterized protein family UPF0004 FY142_12135 PF04055 Radical SAM superfamily FY142_12140 PF01678 Diaminopimelate epimerase FY142_12145 PF12706 Beta-lactamase superfamily domain FY142_12155 PF00448 SRP54-type protein, GTPase domain FY142_12155 PF02978 Signal peptide binding domain FY142_12155 PF02881 SRP54-type protein, helical bundle domain FY142_12160 PF01817 Chorismate mutase type II FY142_12160 PF02153 Prephenate dehydrogenase FY142_12165 PF00886 Ribosomal protein S16 FY142_12170 PF05239 PRC-barrel domain FY142_12170 PF01782 RimM N-terminal domain FY142_12175 PF01746 tRNA (Guanine-1)-methyltransferase FY142_12185 PF01245 Ribosomal protein L19 FY142_12190 PF00005 ABC transporter FY142_12190 PF00664 ABC transporter transmembrane region FY142_12195 PF00529 HlyD membrane-fusion protein of T1SS FY142_12195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_12205 PF07690 Major Facilitator Superfamily FY142_12210 PF00330 Aconitase family (aconitate hydratase) FY142_12225 PF01435 Peptidase family M48 FY142_12230 PF00005 ABC transporter FY142_12235 PF00528 Binding-protein-dependent transport system inner membrane component FY142_12240 PF01547 Bacterial extracellular solute-binding protein FY142_12250 PF00005 ABC transporter FY142_12250 PF16326 ABC transporter C-terminal domain FY142_12260 PF04204 Homoserine O-succinyltransferase FY142_12265 PF01263 Aldose 1-epimerase FY142_12270 PF00912 Transglycosylase FY142_12275 PF00348 Polyprenyl synthetase FY142_12280 PF13488 Glycine zipper FY142_12280 PF00691 OmpA family FY142_12285 PF04551 GcpE protein FY142_12290 PF07690 Major Facilitator Superfamily FY142_12295 PF00455 DeoR C terminal sensor domain FY142_12295 PF08220 DeoR-like helix-turn-helix domain FY142_12300 PF02436 Conserved carboxylase domain FY142_12300 PF00682 HMGL-like FY142_12300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_12300 PF00364 Biotin-requiring enzyme FY142_12300 PF00289 Biotin carboxylase, N-terminal domain FY142_12300 PF02785 Biotin carboxylase C-terminal domain FY142_12305 PF00196 Bacterial regulatory proteins, luxR family FY142_12305 PF00072 Response regulator receiver domain FY142_12310 PF00664 ABC transporter transmembrane region FY142_12310 PF00005 ABC transporter FY142_12320 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY142_12320 PF06165 Glycosyltransferase family 36 FY142_12320 PF10091 Putative glucoamylase FY142_12325 PF01546 Peptidase family M20/M25/M40 FY142_12325 PF07687 Peptidase dimerisation domain FY142_12330 PF01266 FAD dependent oxidoreductase FY142_12335 PF00291 Pyridoxal-phosphate dependent enzyme FY142_12340 PF00920 Dehydratase family FY142_12345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY142_12345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY142_12350 PF01370 NAD dependent epimerase/dehydratase family FY142_12355 PF02913 FAD linked oxidases, C-terminal domain FY142_12355 PF01565 FAD binding domain FY142_12360 PF00392 Bacterial regulatory proteins, gntR family FY142_12360 PF07729 FCD domain FY142_12370 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY142_12375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY142_12380 PF03480 Bacterial extracellular solute-binding protein, family 7 FY142_12385 PF16177 Acetyl-coenzyme A synthetase N-terminus FY142_12385 PF00501 AMP-binding enzyme FY142_12385 PF13193 AMP-binding enzyme C-terminal domain FY142_12395 PF01168 Alanine racemase, N-terminal domain FY142_12400 PF08264 Anticodon-binding domain of tRNA FY142_12400 PF00133 tRNA synthetases class I (I, L, M and V) FY142_12400 PF13603 Leucyl-tRNA synthetase, Domain 2 FY142_12415 PF11953 Domain of unknown function (DUF3470) FY142_12415 PF00037 4Fe-4S binding domain FY142_12420 PF00579 tRNA synthetases class I (W and Y) FY142_12420 PF01479 S4 domain FY142_12435 PF01494 FAD binding domain FY142_12445 PF00543 Nitrogen regulatory protein P-II FY142_12450 PF00909 Ammonium Transporter Family FY142_12455 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY142_12455 PF17854 FtsK alpha domain FY142_12455 PF09397 Ftsk gamma domain FY142_12455 PF01580 FtsK/SpoIIIE family FY142_12460 PF03548 Outer membrane lipoprotein carrier protein LolA FY142_12475 PF00072 Response regulator receiver domain FY142_12475 PF00486 Transcriptional regulatory protein, C terminal FY142_12485 PF02559 CarD-like/TRCF domain FY142_12490 PF05088 Bacterial NAD-glutamate dehydrogenase FY142_12495 PF11700 Vacuole effluxer Atg22 like FY142_12500 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY142_12500 PF05233 PHB accumulation regulatory domain FY142_12505 PF02803 Thiolase, C-terminal domain FY142_12505 PF00108 Thiolase, N-terminal domain FY142_12520 PF00210 Ferritin-like domain FY142_12525 PF00293 NUDIX domain FY142_12530 PF04748 Divergent polysaccharide deacetylase FY142_12535 PF13180 PDZ domain FY142_12535 PF03572 Peptidase family S41 FY142_12545 PF02590 Predicted SPOUT methyltransferase FY142_12555 PF01467 Cytidylyltransferase-like FY142_12560 PF00171 Aldehyde dehydrogenase family FY142_12565 PF00696 Amino acid kinase family FY142_12565 PF01472 PUA domain FY142_12570 PF01018 GTP1/OBG FY142_12570 PF01926 50S ribosome-binding GTPase FY142_12575 PF13302 Acetyltransferase (GNAT) domain FY142_12585 PF01016 Ribosomal L27 protein FY142_12590 PF00829 Ribosomal prokaryotic L21 protein FY142_12605 PF03328 HpcH/HpaI aldolase/citrate lyase family FY142_12615 PF00694 Aconitase C-terminal domain FY142_12620 PF00180 Isocitrate/isopropylmalate dehydrogenase FY142_12625 PF03150 Di-haem cytochrome c peroxidase FY142_12630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY142_12630 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY142_12635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_12640 PF01888 CbiD FY142_12645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_12655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_12660 PF02571 Precorrin-6x reductase CbiJ/CobK FY142_12665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_12670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_12675 PF02570 Precorrin-8X methylmutase FY142_12680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY142_12685 PF02514 CobN/Magnesium Chelatase FY142_12690 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY142_12690 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY142_12700 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY142_12700 PF12557 Cob(I)alamin adenosyltransferase N terminal FY142_12705 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY142_12705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY142_12710 PF03186 CobD/Cbib protein FY142_12715 PF00155 Aminotransferase class I and II FY142_12720 PF13378 Enolase C-terminal domain-like FY142_12720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_12725 PF05336 L-rhamnose mutarotase FY142_12730 PF08125 Mannitol dehydrogenase C-terminal domain FY142_12730 PF01232 Mannitol dehydrogenase Rossmann domain FY142_12735 PF08240 Alcohol dehydrogenase GroES-like domain FY142_12735 PF00107 Zinc-binding dehydrogenase FY142_12745 PF00248 Aldo/keto reductase family FY142_12755 PF02653 Branched-chain amino acid transport system / permease component FY142_12760 PF00005 ABC transporter FY142_12765 PF07729 FCD domain FY142_12765 PF00392 Bacterial regulatory proteins, gntR family FY142_12770 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY142_12770 PF08666 SAF domain FY142_12775 PF01808 AICARFT/IMPCHase bienzyme FY142_12775 PF02142 MGS-like domain FY142_12785 PF01189 16S rRNA methyltransferase RsmB/F FY142_12785 PF01029 NusB family FY142_12790 PF01435 Peptidase family M48 FY142_12800 PF17762 HTH domain found in ParB protein FY142_12800 PF02195 ParB-like nuclease domain FY142_12805 PF13614 AAA domain FY142_12810 PF02527 rRNA small subunit methyltransferase G FY142_12815 PF01134 Glucose inhibited division protein A FY142_12815 PF13932 GidA associated domain FY142_12820 PF01926 50S ribosome-binding GTPase FY142_12820 PF12631 MnmE helical domain FY142_12820 PF10396 GTP-binding protein TrmE N-terminus FY142_12825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY142_12825 PF07498 Rho termination factor, N-terminal domain FY142_12825 PF07497 Rho termination factor, RNA-binding domain FY142_12830 PF03653 Uncharacterised protein family (UPF0093) FY142_12835 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY142_12840 PF03618 Kinase/pyrophosphorylase FY142_12845 PF02545 Maf-like protein FY142_12850 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY142_12850 PF01488 Shikimate / quinate 5-dehydrogenase FY142_12850 PF08501 Shikimate dehydrogenase substrate binding domain FY142_12855 PF01121 Dephospho-CoA kinase FY142_12860 PF00929 Exonuclease FY142_12865 PF02556 Preprotein translocase subunit SecB FY142_12870 PF04186 FxsA cytoplasmic membrane protein FY142_12880 PF06725 3D domain FY142_12880 PF03562 MltA specific insert domain FY142_12895 PF00204 DNA gyrase B FY142_12895 PF00986 DNA gyrase B subunit, carboxyl terminus FY142_12895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_12895 PF01751 Toprim domain FY142_12905 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY142_12920 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY142_12925 PF00291 Pyridoxal-phosphate dependent enzyme FY142_12930 PF00290 Tryptophan synthase alpha chain FY142_12935 PF01039 Carboxyl transferase domain FY142_12940 PF02875 Mur ligase family, glutamate ligase domain FY142_12940 PF08245 Mur ligase middle domain FY142_12945 PF00085 Thioredoxin FY142_12950 PF12705 PD-(D/E)XK nuclease superfamily FY142_12950 PF00580 UvrD/REP helicase N-terminal domain FY142_12950 PF13361 UvrD-like helicase C-terminal domain FY142_12960 PF12804 MobA-like NTP transferase domain FY142_12965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY142_12970 PF00512 His Kinase A (phospho-acceptor) domain FY142_12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_12975 PF05221 S-adenosyl-L-homocysteine hydrolase FY142_12975 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY142_12980 PF00381 PTS HPr component phosphorylation site FY142_12985 PF03610 PTS system fructose IIA component FY142_12985 PF03830 PTS system sorbose subfamily IIB component FY142_12990 PF02603 HPr Serine kinase N terminus FY142_12990 PF07475 HPr Serine kinase C-terminal domain FY142_12995 PF13756 Stimulus-sensing domain FY142_12995 PF13755 Sensor N-terminal transmembrane domain FY142_12995 PF00512 His Kinase A (phospho-acceptor) domain FY142_12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_12995 PF00672 HAMP domain FY142_13000 PF00072 Response regulator receiver domain FY142_13000 PF00486 Transcriptional regulatory protein, C terminal FY142_13005 PF01293 Phosphoenolpyruvate carboxykinase FY142_13010 PF00472 RF-1 domain FY142_13015 PF04972 BON domain FY142_13015 PF01476 LysM domain FY142_13020 PF00485 Phosphoribulokinase / Uridine kinase family FY142_13025 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY142_13030 PF00977 Histidine biosynthesis protein FY142_13035 PF00977 Histidine biosynthesis protein FY142_13040 PF00117 Glutamine amidotransferase class-I FY142_13050 PF00475 Imidazoleglycerol-phosphate dehydratase FY142_13055 PF00227 Proteasome subunit FY142_13060 PF00004 ATPase family associated with various cellular activities (AAA) FY142_13060 PF07724 AAA domain (Cdc48 subfamily) FY142_13060 PF10431 C-terminal, D2-small domain, of ClpB protein FY142_13070 PF01274 Malate synthase FY142_13085 PF00072 Response regulator receiver domain FY142_13090 PF00512 His Kinase A (phospho-acceptor) domain FY142_13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_13095 PF04408 Helicase associated domain (HA2) FY142_13095 PF08482 ATP-dependent helicase C-terminal FY142_13095 PF00271 Helicase conserved C-terminal domain FY142_13095 PF00270 DEAD/DEAH box helicase FY142_13135 PF00271 Helicase conserved C-terminal domain FY142_13135 PF00570 HRDC domain FY142_13135 PF09382 RQC domain FY142_13135 PF00270 DEAD/DEAH box helicase FY142_13135 PF16124 RecQ zinc-binding FY142_13140 PF00480 ROK family FY142_13145 PF13407 Periplasmic binding protein domain FY142_13150 PF02653 Branched-chain amino acid transport system / permease component FY142_13155 PF00005 ABC transporter FY142_13160 PF00485 Phosphoribulokinase / Uridine kinase family FY142_13165 PF00462 Glutaredoxin FY142_13170 PF07972 NrdI Flavodoxin like FY142_13175 PF00317 Ribonucleotide reductase, all-alpha domain FY142_13175 PF08343 Ribonucleotide reductase N-terminal FY142_13175 PF02867 Ribonucleotide reductase, barrel domain FY142_13180 PF00268 Ribonucleotide reductase, small chain FY142_13190 PF02463 RecF/RecN/SMC N terminal domain FY142_13195 PF00581 Rhodanese-like domain FY142_13195 PF00899 ThiF family FY142_13210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_13210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY142_13220 PF00294 pfkB family carbohydrate kinase FY142_13230 PF08468 Methyltransferase small domain N-terminal FY142_13230 PF05175 Methyltransferase small domain FY142_13235 PF03725 3' exoribonuclease family, domain 2 FY142_13235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY142_13235 PF00013 KH domain FY142_13235 PF01138 3' exoribonuclease family, domain 1 FY142_13235 PF00575 S1 RNA binding domain FY142_13240 PF00312 Ribosomal protein S15 FY142_13245 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY142_13245 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY142_13245 PF09157 Pseudouridine synthase II TruB, C-terminal FY142_13250 PF02033 Ribosome-binding factor A FY142_13255 PF00009 Elongation factor Tu GTP binding domain FY142_13255 PF03144 Elongation factor Tu domain 2 FY142_13255 PF11987 Translation-initiation factor 2 FY142_13255 PF04760 Translation initiation factor IF-2, N-terminal region FY142_13255 PF08364 Bacterial translation initiation factor IF-2 associated region FY142_13265 PF13184 NusA-like KH domain FY142_13265 PF08529 NusA N-terminal domain FY142_13265 PF00575 S1 RNA binding domain FY142_13270 PF02576 RimP N-terminal domain FY142_13270 PF17384 RimP C-terminal SH3 domain FY142_13275 PF05977 Transmembrane secretion effector FY142_13285 PF13406 Transglycosylase SLT domain FY142_13290 PF02132 RecR protein FY142_13290 PF13662 Toprim domain FY142_13300 PF02575 YbaB/EbfC DNA-binding family FY142_13305 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY142_13305 PF12170 DNA polymerase III tau subunit V interacting with alpha FY142_13305 PF12169 DNA polymerase III subunits gamma and tau domain III FY142_13320 PF09297 NADH pyrophosphatase zinc ribbon domain FY142_13320 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY142_13320 PF00293 NUDIX domain FY142_13325 PF00800 Prephenate dehydratase FY142_13325 PF01817 Chorismate mutase type II FY142_13330 PF02348 Cytidylyltransferase FY142_13335 PF00034 Cytochrome c FY142_13340 PF02397 Bacterial sugar transferase FY142_13345 PF00905 Penicillin binding protein transpeptidase domain FY142_13345 PF00912 Transglycosylase FY142_13350 PF04073 Aminoacyl-tRNA editing domain FY142_13355 PF00313 'Cold-shock' DNA-binding domain FY142_13360 PF01546 Peptidase family M20/M25/M40 FY142_13360 PF07687 Peptidase dimerisation domain FY142_13365 PF01047 MarR family FY142_13370 PF01612 3'-5' exonuclease FY142_13370 PF00476 DNA polymerase family A FY142_13370 PF01367 5'-3' exonuclease, C-terminal SAM fold FY142_13370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY142_13375 PF01783 Ribosomal L32p protein family FY142_13380 PF02743 Cache domain FY142_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_13380 PF00512 His Kinase A (phospho-acceptor) domain FY142_13385 PF00158 Sigma-54 interaction domain FY142_13385 PF02954 Bacterial regulatory protein, Fis family FY142_13385 PF00072 Response regulator receiver domain FY142_13390 PF03401 Tripartite tricarboxylate transporter family receptor FY142_13395 PF07331 Tripartite tricarboxylate transporter TctB family FY142_13400 PF01970 Tripartite tricarboxylate transporter TctA family FY142_13405 PF04102 SlyX FY142_13415 PF01556 DnaJ C terminal domain FY142_13415 PF00226 DnaJ domain FY142_13415 PF00684 DnaJ central domain FY142_13420 PF00012 Hsp70 protein FY142_13435 PF01625 Peptide methionine sulfoxide reductase FY142_13440 PF02608 ABC transporter substrate-binding protein PnrA-like FY142_13445 PF00005 ABC transporter FY142_13450 PF02653 Branched-chain amino acid transport system / permease component FY142_13455 PF02653 Branched-chain amino acid transport system / permease component FY142_13460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY142_13465 PF01048 Phosphorylase superfamily FY142_13470 PF01791 DeoC/LacD family aldolase FY142_13475 PF00591 Glycosyl transferase family, a/b domain FY142_13475 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY142_13475 PF02885 Glycosyl transferase family, helical bundle domain FY142_13490 PF00962 Adenosine/AMP deaminase FY142_13495 PF01676 Metalloenzyme superfamily FY142_13505 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY142_13510 PF00510 Cytochrome c oxidase subunit III FY142_13515 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY142_13520 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY142_13520 PF06481 COX Aromatic Rich Motif FY142_13525 PF07690 Major Facilitator Superfamily FY142_13525 PF00083 Sugar (and other) transporter FY142_13530 PF04898 Glutamate synthase central domain FY142_13530 PF01493 GXGXG motif FY142_13530 PF00310 Glutamine amidotransferases class-II FY142_13530 PF01645 Conserved region in glutamate synthase FY142_13535 PF00175 Oxidoreductase NAD-binding domain FY142_13535 PF00667 FAD binding domain FY142_13535 PF00258 Flavodoxin FY142_13555 PF00109 Beta-ketoacyl synthase, N-terminal domain FY142_13555 PF02801 Beta-ketoacyl synthase, C-terminal domain FY142_13560 PF07977 FabA-like domain FY142_13570 PF03458 UPF0126 domain FY142_13580 PF06912 Protein of unknown function (DUF1275) FY142_13590 PF00528 Binding-protein-dependent transport system inner membrane component FY142_13595 PF00005 ABC transporter FY142_13600 PF07702 UTRA domain FY142_13600 PF00392 Bacterial regulatory proteins, gntR family FY142_13605 PF01618 MotA/TolQ/ExbB proton channel family FY142_13610 PF02472 Biopolymer transport protein ExbD/TolR FY142_13620 PF02615 Malate/L-lactate dehydrogenase FY142_13635 PF00625 Guanylate kinase FY142_13640 PF07969 Amidohydrolase family FY142_13645 PF06299 Protein of unknown function (DUF1045) FY142_13650 PF00528 Binding-protein-dependent transport system inner membrane component FY142_13655 PF00528 Binding-protein-dependent transport system inner membrane component FY142_13665 PF00005 ABC transporter FY142_13675 PF00005 ABC transporter FY142_13680 PF00005 ABC transporter FY142_13685 PF06007 Phosphonate metabolism protein PhnJ FY142_13690 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY142_13695 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY142_13700 PF06754 Phosphonate metabolism protein PhnG FY142_13705 PF07702 UTRA domain FY142_13705 PF00392 Bacterial regulatory proteins, gntR family FY142_13710 PF01113 Dihydrodipicolinate reductase, N-terminus FY142_13710 PF05173 Dihydrodipicolinate reductase, C-terminus FY142_13715 PF02685 Glucokinase FY142_13720 PF02142 MGS-like domain FY142_13725 PF03411 Penicillin-insensitive murein endopeptidase FY142_13730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_13735 PF00528 Binding-protein-dependent transport system inner membrane component FY142_13740 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_13740 PF00528 Binding-protein-dependent transport system inner membrane component FY142_13745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_13745 PF00005 ABC transporter FY142_13750 PF01266 FAD dependent oxidoreductase FY142_13755 PF00120 Glutamine synthetase, catalytic domain FY142_13760 PF01266 FAD dependent oxidoreductase FY142_13770 PF00528 Binding-protein-dependent transport system inner membrane component FY142_13775 PF00005 ABC transporter FY142_13780 PF00528 Binding-protein-dependent transport system inner membrane component FY142_13785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY142_13795 PF02082 Transcriptional regulator FY142_13800 PF13416 Bacterial extracellular solute-binding protein FY142_13810 PF05987 Bacterial protein of unknown function (DUF898) FY142_13815 PF00171 Aldehyde dehydrogenase family FY142_13820 PF03466 LysR substrate binding domain FY142_13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_13825 PF00892 EamA-like transporter family FY142_13840 PF00877 NlpC/P60 family FY142_13850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY142_13850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY142_13855 PF00883 Cytosol aminopeptidase family, catalytic domain FY142_13855 PF02789 Cytosol aminopeptidase family, N-terminal domain FY142_13875 PF00437 Type II/IV secretion system protein FY142_13890 PF04972 BON domain FY142_13890 PF00263 Bacterial type II and III secretion system protein FY142_13890 PF13629 Pilus formation protein N terminal region FY142_13930 PF00117 Glutamine amidotransferase class-I FY142_13935 PF07411 Domain of unknown function (DUF1508) FY142_13940 PF01183 Glycosyl hydrolases family 25 FY142_13945 PF00892 EamA-like transporter family FY142_13950 PF00392 Bacterial regulatory proteins, gntR family FY142_13950 PF00155 Aminotransferase class I and II FY142_13965 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_13980 PF03144 Elongation factor Tu domain 2 FY142_13980 PF00009 Elongation factor Tu GTP binding domain FY142_13980 PF06421 GTP-binding protein LepA C-terminus FY142_13980 PF00679 Elongation factor G C-terminus FY142_13985 PF00795 Carbon-nitrogen hydrolase FY142_14015 PF12833 Helix-turn-helix domain FY142_14015 PF02311 AraC-like ligand binding domain FY142_14020 PF03480 Bacterial extracellular solute-binding protein, family 7 FY142_14045 PF05198 Translation initiation factor IF-3, N-terminal domain FY142_14045 PF00707 Translation initiation factor IF-3, C-terminal domain FY142_14050 PF01632 Ribosomal protein L35 FY142_14055 PF00453 Ribosomal protein L20 FY142_14065 PF01409 tRNA synthetases class II core domain (F) FY142_14065 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY142_14070 PF03484 tRNA synthetase B5 domain FY142_14070 PF03483 B3/4 domain FY142_14070 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY142_14070 PF01588 Putative tRNA binding domain FY142_14070 PF03147 Ferredoxin-fold anticodon binding domain FY142_14075 PF00248 Aldo/keto reductase family FY142_14080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_14080 PF03466 LysR substrate binding domain FY142_14090 PF00248 Aldo/keto reductase family FY142_14095 PF01965 DJ-1/PfpI family FY142_14095 PF12833 Helix-turn-helix domain FY142_14105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_14105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_14120 PF13742 OB-fold nucleic acid binding domain FY142_14120 PF02601 Exonuclease VII, large subunit FY142_14125 PF13378 Enolase C-terminal domain-like FY142_14125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_14130 PF07729 FCD domain FY142_14130 PF00392 Bacterial regulatory proteins, gntR family FY142_14135 PF01047 MarR family FY142_14145 PF02073 Thermophilic metalloprotease (M29) FY142_14150 PF04073 Aminoacyl-tRNA editing domain FY142_14155 PF03960 ArsC family FY142_14170 PF00440 Bacterial regulatory proteins, tetR family FY142_14180 PF00958 GMP synthase C terminal domain FY142_14180 PF00117 Glutamine amidotransferase class-I FY142_14195 PF03073 TspO/MBR family FY142_14220 PF01189 16S rRNA methyltransferase RsmB/F FY142_14220 PF01029 NusB family FY142_14225 PF03330 Lytic transglycolase FY142_14235 PF08331 Domain of unknown function (DUF1730) FY142_14240 PF00043 Glutathione S-transferase, C-terminal domain FY142_14240 PF13417 Glutathione S-transferase, N-terminal domain FY142_14245 PF02673 Bacitracin resistance protein BacA FY142_14260 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY142_14270 PF13649 Methyltransferase domain FY142_14275 PF02768 DNA polymerase III beta subunit, C-terminal domain FY142_14275 PF02767 DNA polymerase III beta subunit, central domain FY142_14275 PF00712 DNA polymerase III beta subunit, N-terminal domain FY142_14280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_14285 PF02021 Uncharacterised protein family UPF0102 FY142_14290 PF12464 Maltose acetyltransferase FY142_14290 PF14602 Hexapeptide repeat of succinyl-transferase FY142_14295 PF13416 Bacterial extracellular solute-binding protein FY142_14300 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14305 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14310 PF00005 ABC transporter FY142_14320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY142_14320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY142_14325 PF01078 Magnesium chelatase, subunit ChlI FY142_14325 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY142_14330 PF00291 Pyridoxal-phosphate dependent enzyme FY142_14335 PF01810 LysE type translocator FY142_14340 PF00692 dUTPase FY142_14345 PF16658 Class II release factor RF3, C-terminal domain FY142_14345 PF00009 Elongation factor Tu GTP binding domain FY142_14345 PF03144 Elongation factor Tu domain 2 FY142_14350 PF02441 Flavoprotein FY142_14350 PF04127 DNA / pantothenate metabolism flavoprotein FY142_14365 PF03109 ABC1 family FY142_14370 PF01209 ubiE/COQ5 methyltransferase family FY142_14375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY142_14375 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY142_14375 PF06827 Zinc finger found in FPG and IleRS FY142_14380 PF00378 Enoyl-CoA hydratase/isomerase FY142_14385 PF01649 Ribosomal protein S20 FY142_14395 PF13289 SIR2-like domain FY142_14425 PF00313 'Cold-shock' DNA-binding domain FY142_14445 PF13458 Periplasmic binding protein FY142_14450 PF02653 Branched-chain amino acid transport system / permease component FY142_14455 PF02653 Branched-chain amino acid transport system / permease component FY142_14460 PF00005 ABC transporter FY142_14460 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_14465 PF00005 ABC transporter FY142_14465 PF09383 NIL domain FY142_14470 PF00795 Carbon-nitrogen hydrolase FY142_14475 PF00465 Iron-containing alcohol dehydrogenase FY142_14480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_14485 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14490 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14490 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_14495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_14495 PF00005 ABC transporter FY142_14500 PF08220 DeoR-like helix-turn-helix domain FY142_14500 PF00455 DeoR C terminal sensor domain FY142_14505 PF01546 Peptidase family M20/M25/M40 FY142_14520 PF00459 Inositol monophosphatase family FY142_14525 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY142_14530 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY142_14535 PF00999 Sodium/hydrogen exchanger family FY142_14540 PF13649 Methyltransferase domain FY142_14550 PF01266 FAD dependent oxidoreductase FY142_14555 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_14555 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14560 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_14570 PF01266 FAD dependent oxidoreductase FY142_14575 PF00300 Histidine phosphatase superfamily (branch 1) FY142_14575 PF00106 short chain dehydrogenase FY142_14585 PF00005 ABC transporter FY142_14585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_14595 PF00990 Diguanylate cyclase, GGDEF domain FY142_14600 PF07690 Major Facilitator Superfamily FY142_14610 PF17991 Thioredoxin like C-terminal domain FY142_14610 PF02683 Cytochrome C biogenesis protein transmembrane region FY142_14610 PF00578 AhpC/TSA family FY142_14620 PF00561 alpha/beta hydrolase fold FY142_14625 PF00486 Transcriptional regulatory protein, C terminal FY142_14625 PF00072 Response regulator receiver domain FY142_14630 PF00672 HAMP domain FY142_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_14630 PF00512 His Kinase A (phospho-acceptor) domain FY142_14635 PF02566 OsmC-like protein FY142_14640 PF00171 Aldehyde dehydrogenase family FY142_14645 PF06441 Epoxide hydrolase N terminus FY142_14655 PF00561 alpha/beta hydrolase fold FY142_14660 PF00210 Ferritin-like domain FY142_14665 PF00384 Molybdopterin oxidoreductase FY142_14670 PF00072 Response regulator receiver domain FY142_14670 PF13426 PAS domain FY142_14670 PF08448 PAS fold FY142_14670 PF00512 His Kinase A (phospho-acceptor) domain FY142_14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_14675 PF00196 Bacterial regulatory proteins, luxR family FY142_14675 PF00072 Response regulator receiver domain FY142_14680 PF00196 Bacterial regulatory proteins, luxR family FY142_14680 PF00072 Response regulator receiver domain FY142_14695 PF01494 FAD binding domain FY142_14700 PF04199 Putative cyclase FY142_14705 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY142_14710 PF03480 Bacterial extracellular solute-binding protein, family 7 FY142_14710 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY142_14720 PF09339 IclR helix-turn-helix domain FY142_14720 PF01614 Bacterial transcriptional regulator FY142_14730 PF00501 AMP-binding enzyme FY142_14730 PF13193 AMP-binding enzyme C-terminal domain FY142_14755 PF01037 Lrp/AsnC ligand binding domain FY142_14780 PF01594 AI-2E family transporter FY142_14795 PF13520 Amino acid permease FY142_14800 PF13520 Amino acid permease FY142_14810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_14820 PF02308 MgtC family FY142_14825 PF01494 FAD binding domain FY142_14835 PF13460 NAD(P)H-binding FY142_14840 PF00873 AcrB/AcrD/AcrF family FY142_14845 PF00529 HlyD membrane-fusion protein of T1SS FY142_14845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_14850 PF00072 Response regulator receiver domain FY142_14850 PF00486 Transcriptional regulatory protein, C terminal FY142_14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_14855 PF00512 His Kinase A (phospho-acceptor) domain FY142_14855 PF00989 PAS fold FY142_14855 PF16736 Single Cache-like FY142_14860 PF07690 Major Facilitator Superfamily FY142_14870 PF00860 Permease family FY142_14880 PF00144 Beta-lactamase FY142_14885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_14885 PF03466 LysR substrate binding domain FY142_14925 PF01177 Asp/Glu/Hydantoin racemase FY142_14930 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14935 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14945 PF08402 TOBE domain FY142_14945 PF00005 ABC transporter FY142_14970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_14970 PF08447 PAS fold FY142_14970 PF13426 PAS domain FY142_14980 PF13416 Bacterial extracellular solute-binding protein FY142_14985 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14990 PF00528 Binding-protein-dependent transport system inner membrane component FY142_14995 PF00005 ABC transporter FY142_14995 PF17912 MalK OB fold domain FY142_15005 PF00296 Luciferase-like monooxygenase FY142_15010 PF09084 NMT1/THI5 like FY142_15015 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15020 PF00005 ABC transporter FY142_15025 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15030 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15040 PF00005 ABC transporter FY142_15040 PF17912 MalK OB fold domain FY142_15045 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY142_15060 PF00356 Bacterial regulatory proteins, lacI family FY142_15070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY142_15070 PF01842 ACT domain FY142_15070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_15075 PF01261 Xylose isomerase-like TIM barrel FY142_15080 PF03459 TOBE domain FY142_15080 PF17912 MalK OB fold domain FY142_15080 PF00005 ABC transporter FY142_15085 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15090 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15095 PF13416 Bacterial extracellular solute-binding protein FY142_15100 PF00440 Bacterial regulatory proteins, tetR family FY142_15100 PF17938 Tetracyclin repressor-like, C-terminal domain FY142_15105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_15105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_15120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_15120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_15125 PF00313 'Cold-shock' DNA-binding domain FY142_15135 PF01165 Ribosomal protein S21 FY142_15155 PF00550 Phosphopantetheine attachment site FY142_15160 PF07470 Glycosyl Hydrolase Family 88 FY142_15165 PF00295 Glycosyl hydrolases family 28 FY142_15175 PF00005 ABC transporter FY142_15175 PF08402 TOBE domain FY142_15180 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15185 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15190 PF02311 AraC-like ligand binding domain FY142_15190 PF12833 Helix-turn-helix domain FY142_15195 PF04909 Amidohydrolase FY142_15200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_15200 PF13378 Enolase C-terminal domain-like FY142_15205 PF00701 Dihydrodipicolinate synthetase family FY142_15215 PF04962 KduI/IolB family FY142_15220 PF01370 NAD dependent epimerase/dehydratase family FY142_15225 PF00392 Bacterial regulatory proteins, gntR family FY142_15225 PF07729 FCD domain FY142_15240 PF00248 Aldo/keto reductase family FY142_15245 PF00005 ABC transporter FY142_15245 PF17912 MalK OB fold domain FY142_15250 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15255 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15270 PF02311 AraC-like ligand binding domain FY142_15270 PF12833 Helix-turn-helix domain FY142_15275 PF07690 Major Facilitator Superfamily FY142_15280 PF00356 Bacterial regulatory proteins, lacI family FY142_15285 PF08240 Alcohol dehydrogenase GroES-like domain FY142_15285 PF16912 Glucose dehydrogenase C-terminus FY142_15300 PF00294 pfkB family carbohydrate kinase FY142_15305 PF08013 Tagatose 6 phosphate kinase FY142_15310 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15315 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15320 PF00005 ABC transporter FY142_15320 PF08402 TOBE domain FY142_15325 PF17912 MalK OB fold domain FY142_15325 PF00005 ABC transporter FY142_15330 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15335 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15340 PF01547 Bacterial extracellular solute-binding protein FY142_15345 PF01053 Cys/Met metabolism PLP-dependent enzyme FY142_15360 PF00583 Acetyltransferase (GNAT) family FY142_15365 PF01297 Zinc-uptake complex component A periplasmic FY142_15370 PF00950 ABC 3 transport family FY142_15375 PF00005 ABC transporter FY142_15380 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY142_15380 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY142_15395 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY142_15395 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY142_15400 PF13416 Bacterial extracellular solute-binding protein FY142_15405 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15410 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15415 PF08402 TOBE domain FY142_15415 PF00005 ABC transporter FY142_15425 PF03922 OmpW family FY142_15445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY142_15445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY142_15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_15450 PF03466 LysR substrate binding domain FY142_15455 PF13407 Periplasmic binding protein domain FY142_15460 PF02653 Branched-chain amino acid transport system / permease component FY142_15465 PF00005 ABC transporter FY142_15470 PF00440 Bacterial regulatory proteins, tetR family FY142_15470 PF08361 MAATS-type transcriptional repressor, C-terminal region FY142_15475 PF00873 AcrB/AcrD/AcrF family FY142_15480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_15480 PF00529 HlyD membrane-fusion protein of T1SS FY142_15485 PF00990 Diguanylate cyclase, GGDEF domain FY142_15485 PF17151 Periplasmic sensor domain FY142_15490 PF07883 Cupin domain FY142_15490 PF05899 Protein of unknown function (DUF861) FY142_15500 PF00990 Diguanylate cyclase, GGDEF domain FY142_15500 PF00563 EAL domain FY142_15500 PF08447 PAS fold FY142_15500 PF08448 PAS fold FY142_15505 PF02615 Malate/L-lactate dehydrogenase FY142_15510 PF09397 Ftsk gamma domain FY142_15510 PF01580 FtsK/SpoIIIE family FY142_15510 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY142_15510 PF17854 FtsK alpha domain FY142_15515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_15520 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15525 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_15530 PF00005 ABC transporter FY142_15535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_15535 PF00005 ABC transporter FY142_15540 PF00266 Aminotransferase class-V FY142_15550 PF12833 Helix-turn-helix domain FY142_15555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_15565 PF00920 Dehydratase family FY142_15570 PF13407 Periplasmic binding protein domain FY142_15575 PF00005 ABC transporter FY142_15580 PF02653 Branched-chain amino acid transport system / permease component FY142_15585 PF02653 Branched-chain amino acid transport system / permease component FY142_15590 PF07729 FCD domain FY142_15590 PF00392 Bacterial regulatory proteins, gntR family FY142_15595 PF07690 Major Facilitator Superfamily FY142_15605 PF13847 Methyltransferase domain FY142_15610 PF02811 PHP domain FY142_15610 PF01336 OB-fold nucleic acid binding domain FY142_15610 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY142_15610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY142_15610 PF14579 Helix-hairpin-helix motif FY142_15630 PF13660 Domain of unknown function (DUF4147) FY142_15630 PF05161 MOFRL family FY142_15640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_15640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_15650 PF03459 TOBE domain FY142_15650 PF17912 MalK OB fold domain FY142_15650 PF00005 ABC transporter FY142_15655 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15660 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15665 PF01547 Bacterial extracellular solute-binding protein FY142_15675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_15685 PF01425 Amidase FY142_15690 PF00990 Diguanylate cyclase, GGDEF domain FY142_15690 PF08447 PAS fold FY142_15690 PF08448 PAS fold FY142_15690 PF00563 EAL domain FY142_15700 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_15705 PF03776 Septum formation topological specificity factor MinE FY142_15710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY142_15715 PF05209 Septum formation inhibitor MinC, N-terminal domain FY142_15715 PF03775 Septum formation inhibitor MinC, C-terminal domain FY142_15720 PF13419 Haloacid dehalogenase-like hydrolase FY142_15725 PF00392 Bacterial regulatory proteins, gntR family FY142_15725 PF07729 FCD domain FY142_15730 PF03480 Bacterial extracellular solute-binding protein, family 7 FY142_15740 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY142_15745 PF08240 Alcohol dehydrogenase GroES-like domain FY142_15745 PF00107 Zinc-binding dehydrogenase FY142_15750 PF03786 D-mannonate dehydratase (UxuA) FY142_15760 PF00171 Aldehyde dehydrogenase family FY142_15770 PF03480 Bacterial extracellular solute-binding protein, family 7 FY142_15775 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY142_15775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY142_15780 PF00296 Luciferase-like monooxygenase FY142_15795 PF00043 Glutathione S-transferase, C-terminal domain FY142_15795 PF02798 Glutathione S-transferase, N-terminal domain FY142_15800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_15800 PF00005 ABC transporter FY142_15805 PF03841 L-seryl-tRNA selenium transferase FY142_15820 PF01979 Amidohydrolase family FY142_15825 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15825 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_15830 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_15840 PF00534 Glycosyl transferases group 1 FY142_15840 PF13439 Glycosyltransferase Family 4 FY142_15845 PF02563 Polysaccharide biosynthesis/export protein FY142_15850 PF13533 Biotin-lipoyl like FY142_15855 PF00873 AcrB/AcrD/AcrF family FY142_15870 PF01613 Flavin reductase like domain FY142_15875 PF00248 Aldo/keto reductase family FY142_15880 PF00296 Luciferase-like monooxygenase FY142_15885 PF00392 Bacterial regulatory proteins, gntR family FY142_15885 PF07702 UTRA domain FY142_15890 PF00005 ABC transporter FY142_15890 PF08402 TOBE domain FY142_15895 PF01547 Bacterial extracellular solute-binding protein FY142_15900 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15905 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15910 PF01055 Glycosyl hydrolases family 31 FY142_15920 PF00528 Binding-protein-dependent transport system inner membrane component FY142_15925 PF09084 NMT1/THI5 like FY142_15930 PF02110 Hydroxyethylthiazole kinase family FY142_15935 PF02581 Thiamine monophosphate synthase FY142_15940 PF08543 Phosphomethylpyrimidine kinase FY142_15945 PF01037 Lrp/AsnC ligand binding domain FY142_15950 PF00842 Alanine racemase, C-terminal domain FY142_15950 PF01168 Alanine racemase, N-terminal domain FY142_15955 PF01266 FAD dependent oxidoreductase FY142_15970 PF00072 Response regulator receiver domain FY142_15970 PF00158 Sigma-54 interaction domain FY142_15970 PF02954 Bacterial regulatory protein, Fis family FY142_15975 PF02743 Cache domain FY142_15975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_15975 PF00512 His Kinase A (phospho-acceptor) domain FY142_15980 PF00375 Sodium:dicarboxylate symporter family FY142_15985 PF00202 Aminotransferase class-III FY142_16000 PF01546 Peptidase family M20/M25/M40 FY142_16000 PF07687 Peptidase dimerisation domain FY142_16010 PF01270 Glycosyl hydrolases family 8 FY142_16020 PF03552 Cellulose synthase FY142_16020 PF00535 Glycosyl transferase family 2 FY142_16020 PF07238 PilZ domain FY142_16050 PF16363 GDP-mannose 4,6 dehydratase FY142_16055 PF01370 NAD dependent epimerase/dehydratase family FY142_16065 PF00196 Bacterial regulatory proteins, luxR family FY142_16065 PF00072 Response regulator receiver domain FY142_16080 PF00005 ABC transporter FY142_16080 PF00664 ABC transporter transmembrane region FY142_16085 PF00529 HlyD membrane-fusion protein of T1SS FY142_16100 PF02563 Polysaccharide biosynthesis/export protein FY142_16105 PF02397 Bacterial sugar transferase FY142_16115 PF00202 Aminotransferase class-III FY142_16120 PF00672 HAMP domain FY142_16120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_16125 PF03734 L,D-transpeptidase catalytic domain FY142_16125 PF17969 L,D-transpeptidase C-terminal domain FY142_16145 PF02245 Methylpurine-DNA glycosylase (MPG) FY142_16160 PF00356 Bacterial regulatory proteins, lacI family FY142_16165 PF01547 Bacterial extracellular solute-binding protein FY142_16170 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16175 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16180 PF17912 MalK OB fold domain FY142_16180 PF00005 ABC transporter FY142_16180 PF03459 TOBE domain FY142_16190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_16190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_16195 PF04055 Radical SAM superfamily FY142_16200 PF01242 6-pyruvoyl tetrahydropterin synthase FY142_16205 PF06508 Queuosine biosynthesis protein QueC FY142_16210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_16210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_16220 PF17912 MalK OB fold domain FY142_16220 PF00005 ABC transporter FY142_16225 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16230 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16235 PF01547 Bacterial extracellular solute-binding protein FY142_16245 PF01050 Mannose-6-phosphate isomerase FY142_16245 PF00483 Nucleotidyl transferase FY142_16250 PF01011 PQQ enzyme repeat FY142_16255 PF03466 LysR substrate binding domain FY142_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_16260 PF01515 Phosphate acetyl/butaryl transferase FY142_16260 PF03949 Malic enzyme, NAD binding domain FY142_16260 PF00390 Malic enzyme, N-terminal domain FY142_16265 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_16270 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16275 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16280 PF00005 ABC transporter FY142_16285 PF03972 MmgE/PrpD family FY142_16290 PF00296 Luciferase-like monooxygenase FY142_16295 PF08447 PAS fold FY142_16295 PF13426 PAS domain FY142_16295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_16300 PF01266 FAD dependent oxidoreductase FY142_16315 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY142_16320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY142_16325 PF03480 Bacterial extracellular solute-binding protein, family 7 FY142_16330 PF07722 Peptidase C26 FY142_16335 PF02653 Branched-chain amino acid transport system / permease component FY142_16340 PF00005 ABC transporter FY142_16345 PF13407 Periplasmic binding protein domain FY142_16355 PF01546 Peptidase family M20/M25/M40 FY142_16360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_16370 PF00005 ABC transporter FY142_16370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_16375 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16375 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_16380 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16385 PF03466 LysR substrate binding domain FY142_16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_16390 PF01112 Asparaginase FY142_16405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_16420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_16420 PF00005 ABC transporter FY142_16425 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_16425 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16430 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16435 PF00196 Bacterial regulatory proteins, luxR family FY142_16435 PF00072 Response regulator receiver domain FY142_16440 PF03737 Aldolase/RraA FY142_16445 PF01370 NAD dependent epimerase/dehydratase family FY142_16450 PF00920 Dehydratase family FY142_16455 PF03459 TOBE domain FY142_16455 PF17912 MalK OB fold domain FY142_16455 PF00005 ABC transporter FY142_16460 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16465 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_16475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_16480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_16480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_16485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_16485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_16490 PF00392 Bacterial regulatory proteins, gntR family FY142_16490 PF07729 FCD domain FY142_16500 PF00529 HlyD membrane-fusion protein of T1SS FY142_16500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_16505 PF00005 ABC transporter FY142_16505 PF00664 ABC transporter transmembrane region FY142_16525 PF04542 Sigma-70 region 2 FY142_16525 PF08281 Sigma-70, region 4 FY142_16525 PF12680 SnoaL-like domain FY142_16530 PF00005 ABC transporter FY142_16535 PF01032 FecCD transport family FY142_16550 PF01209 ubiE/COQ5 methyltransferase family FY142_16555 PF00127 Copper binding proteins, plastocyanin/azurin family FY142_16560 PF00005 ABC transporter FY142_16565 PF01032 FecCD transport family FY142_16580 PF07687 Peptidase dimerisation domain FY142_16580 PF01546 Peptidase family M20/M25/M40 FY142_16585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_16600 PF05378 Hydantoinase/oxoprolinase N-terminal region FY142_16600 PF01968 Hydantoinase/oxoprolinase FY142_16610 PF00171 Aldehyde dehydrogenase family FY142_16615 PF00180 Isocitrate/isopropylmalate dehydrogenase FY142_16620 PF00171 Aldehyde dehydrogenase family FY142_16625 PF01266 FAD dependent oxidoreductase FY142_16640 PF00202 Aminotransferase class-III FY142_16650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_16655 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16660 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16660 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_16665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_16665 PF00005 ABC transporter FY142_16670 PF01037 Lrp/AsnC ligand binding domain FY142_16675 PF01266 FAD dependent oxidoreductase FY142_16680 PF01266 FAD dependent oxidoreductase FY142_16685 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_16685 PF04324 BFD-like [2Fe-2S] binding domain FY142_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_16695 PF03466 LysR substrate binding domain FY142_16705 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_16710 PF00005 ABC transporter FY142_16720 PF07687 Peptidase dimerisation domain FY142_16720 PF01546 Peptidase family M20/M25/M40 FY142_16725 PF00296 Luciferase-like monooxygenase FY142_16730 PF00296 Luciferase-like monooxygenase FY142_16735 PF02082 Transcriptional regulator FY142_16745 PF01613 Flavin reductase like domain FY142_16750 PF00296 Luciferase-like monooxygenase FY142_16765 PF00581 Rhodanese-like domain FY142_16775 PF00296 Luciferase-like monooxygenase FY142_16780 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_16780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_16780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_16790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_16795 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16800 PF00528 Binding-protein-dependent transport system inner membrane component FY142_16805 PF00005 ABC transporter FY142_16805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_16810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_16810 PF00005 ABC transporter FY142_16815 PF00248 Aldo/keto reductase family FY142_16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_16825 PF03466 LysR substrate binding domain FY142_16830 PF00296 Luciferase-like monooxygenase FY142_16835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_16850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_16855 PF07687 Peptidase dimerisation domain FY142_16855 PF01546 Peptidase family M20/M25/M40 FY142_16860 PF00296 Luciferase-like monooxygenase FY142_16865 PF05368 NmrA-like family FY142_16875 PF00296 Luciferase-like monooxygenase FY142_16880 PF00296 Luciferase-like monooxygenase FY142_16890 PF01638 HxlR-like helix-turn-helix FY142_16895 PF00106 short chain dehydrogenase FY142_16900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_16900 PF13378 Enolase C-terminal domain-like FY142_16910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_17030 PF03237 Terminase-like family FY142_17035 PF06074 Protein of unknown function (DUF935) FY142_17040 PF04233 Phage Mu protein F like protein FY142_17170 PF00005 ABC transporter FY142_17170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_17175 PF00005 ABC transporter FY142_17175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_17180 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_17180 PF00528 Binding-protein-dependent transport system inner membrane component FY142_17185 PF00528 Binding-protein-dependent transport system inner membrane component FY142_17195 PF07729 FCD domain FY142_17195 PF00392 Bacterial regulatory proteins, gntR family FY142_17205 PF00561 alpha/beta hydrolase fold FY142_17210 PF00106 short chain dehydrogenase FY142_17220 PF04273 Putative phosphatase (DUF442) FY142_17220 PF00753 Metallo-beta-lactamase superfamily FY142_17230 PF04143 Sulphur transport FY142_17240 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY142_17240 PF01676 Metalloenzyme superfamily FY142_17245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY142_17245 PF00364 Biotin-requiring enzyme FY142_17245 PF02817 e3 binding domain FY142_17250 PF02779 Transketolase, pyrimidine binding domain FY142_17250 PF02780 Transketolase, C-terminal domain FY142_17255 PF00676 Dehydrogenase E1 component FY142_17255 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY142_17260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_17260 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_17260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_17265 PF00108 Thiolase, N-terminal domain FY142_17265 PF02803 Thiolase, C-terminal domain FY142_17270 PF01037 Lrp/AsnC ligand binding domain FY142_17275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_17275 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_17275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_17280 PF01039 Carboxyl transferase domain FY142_17285 PF02785 Biotin carboxylase C-terminal domain FY142_17285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_17285 PF00364 Biotin-requiring enzyme FY142_17285 PF00289 Biotin carboxylase, N-terminal domain FY142_17290 PF00682 HMGL-like FY142_17300 PF02569 Pantoate-beta-alanine ligase FY142_17305 PF02548 Ketopantoate hydroxymethyltransferase FY142_17310 PF01261 Xylose isomerase-like TIM barrel FY142_17315 PF00596 Class II Aldolase and Adducin N-terminal domain FY142_17320 PF08220 DeoR-like helix-turn-helix domain FY142_17320 PF00455 DeoR C terminal sensor domain FY142_17325 PF13407 Periplasmic binding protein domain FY142_17330 PF00005 ABC transporter FY142_17335 PF02653 Branched-chain amino acid transport system / permease component FY142_17340 PF02653 Branched-chain amino acid transport system / permease component FY142_17345 PF05336 L-rhamnose mutarotase FY142_17355 PF00561 alpha/beta hydrolase fold FY142_17365 PF08447 PAS fold FY142_17365 PF00563 EAL domain FY142_17365 PF00990 Diguanylate cyclase, GGDEF domain FY142_17365 PF08448 PAS fold FY142_17375 PF00171 Aldehyde dehydrogenase family FY142_17380 PF08713 DNA alkylation repair enzyme FY142_17385 PF00005 ABC transporter FY142_17390 PF00528 Binding-protein-dependent transport system inner membrane component FY142_17395 PF00528 Binding-protein-dependent transport system inner membrane component FY142_17405 PF00378 Enoyl-CoA hydratase/isomerase FY142_17420 PF08241 Methyltransferase domain FY142_17430 PF00795 Carbon-nitrogen hydrolase FY142_17435 PF00462 Glutaredoxin FY142_17445 PF08241 Methyltransferase domain FY142_17460 PF00293 NUDIX domain FY142_17465 PF00583 Acetyltransferase (GNAT) family FY142_17465 PF13508 Acetyltransferase (GNAT) domain FY142_17470 PF01960 ArgJ family FY142_17480 PF07517 SecA DEAD-like domain FY142_17480 PF07516 SecA Wing and Scaffold domain FY142_17480 PF01043 SecA preprotein cross-linking domain FY142_17480 PF02810 SEC-C motif FY142_17485 PF00892 EamA-like transporter family FY142_17490 PF01757 Acyltransferase family FY142_17550 PF01943 Polysaccharide biosynthesis protein FY142_17565 PF01757 Acyltransferase family FY142_17575 PF02706 Chain length determinant protein FY142_17575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY142_17575 PF13807 G-rich domain on putative tyrosine kinase FY142_17595 PF00534 Glycosyl transferases group 1 FY142_17595 PF13439 Glycosyltransferase Family 4 FY142_17600 PF00534 Glycosyl transferases group 1 FY142_17600 PF13439 Glycosyltransferase Family 4 FY142_17615 PF01272 Transcription elongation factor, GreA/GreB, C-term FY142_17615 PF03449 Transcription elongation factor, N-terminal FY142_17620 PF00722 Glycosyl hydrolases family 16 FY142_17620 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY142_17630 PF03009 Glycerophosphoryl diester phosphodiesterase family FY142_17635 PF03459 TOBE domain FY142_17635 PF17912 MalK OB fold domain FY142_17635 PF00005 ABC transporter FY142_17640 PF00528 Binding-protein-dependent transport system inner membrane component FY142_17645 PF00528 Binding-protein-dependent transport system inner membrane component FY142_17655 PF00480 ROK family FY142_17655 PF01047 MarR family FY142_17680 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY142_17695 PF01381 Helix-turn-helix FY142_17705 PF01717 Cobalamin-independent synthase, Catalytic domain FY142_17705 PF08267 Cobalamin-independent synthase, N-terminal domain FY142_17710 PF00005 ABC transporter FY142_17715 PF02653 Branched-chain amino acid transport system / permease component FY142_17720 PF13407 Periplasmic binding protein domain FY142_17730 PF01266 FAD dependent oxidoreductase FY142_17730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY142_17740 PF02310 B12 binding domain FY142_17740 PF01642 Methylmalonyl-CoA mutase FY142_17745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_17745 PF00289 Biotin carboxylase, N-terminal domain FY142_17745 PF00364 Biotin-requiring enzyme FY142_17745 PF02785 Biotin carboxylase C-terminal domain FY142_17745 PF18140 Propionyl-coenzyme A carboxylase BT domain FY142_17760 PF02798 Glutathione S-transferase, N-terminal domain FY142_17765 PF01039 Carboxyl transferase domain FY142_17770 PF01381 Helix-turn-helix FY142_17770 PF06114 IrrE N-terminal-like domain FY142_17770 PF09856 Predicted transcriptional regulator (DUF2083) FY142_17775 PF12833 Helix-turn-helix domain FY142_17775 PF02805 Metal binding domain of Ada FY142_17775 PF00730 HhH-GPD superfamily base excision DNA repair protein FY142_17775 PF06029 AlkA N-terminal domain FY142_17780 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY142_17790 PF00106 short chain dehydrogenase FY142_17800 PF01923 Cobalamin adenosyltransferase FY142_17810 PF01012 Electron transfer flavoprotein domain FY142_17815 PF01012 Electron transfer flavoprotein domain FY142_17815 PF00766 Electron transfer flavoprotein FAD-binding domain FY142_17820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY142_17820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY142_17830 PF08534 Redoxin FY142_17835 PF14698 Argininosuccinate lyase C-terminal FY142_17835 PF00206 Lyase FY142_17845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY142_17845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY142_17855 PF00072 Response regulator receiver domain FY142_17860 PF00156 Phosphoribosyl transferase domain FY142_17870 PF00005 ABC transporter FY142_17890 PF04752 ChaC-like protein FY142_17900 PF02153 Prephenate dehydrogenase FY142_17905 PF00155 Aminotransferase class I and II FY142_17910 PF01209 ubiE/COQ5 methyltransferase family FY142_17915 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY142_17915 PF00753 Metallo-beta-lactamase superfamily FY142_17935 PF00830 Ribosomal L28 family FY142_17940 PF02592 Putative vitamin uptake transporter FY142_17955 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY142_17955 PF06213 Cobalamin biosynthesis protein CobT FY142_17960 PF12556 Cobaltochelatase CobS subunit N terminal FY142_17960 PF08406 CbbQ/NirQ/NorQ C-terminal FY142_17960 PF07728 AAA domain (dynein-related subfamily) FY142_17965 PF00226 DnaJ domain FY142_17970 PF01722 BolA-like protein FY142_17980 PF01761 3-dehydroquinate synthase FY142_17985 PF01202 Shikimate kinase FY142_17995 PF02899 Phage integrase, N-terminal SAM-like domain FY142_17995 PF00589 Phage integrase family FY142_18000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY142_18005 PF03734 L,D-transpeptidase catalytic domain FY142_18010 PF01206 Sulfurtransferase TusA FY142_18010 PF00581 Rhodanese-like domain FY142_18015 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY142_18015 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY142_18020 PF07943 Penicillin-binding protein 5, C-terminal domain FY142_18020 PF00768 D-alanyl-D-alanine carboxypeptidase FY142_18025 PF07687 Peptidase dimerisation domain FY142_18025 PF01546 Peptidase family M20/M25/M40 FY142_18035 PF00905 Penicillin binding protein transpeptidase domain FY142_18035 PF00912 Transglycosylase FY142_18035 PF06832 Penicillin-Binding Protein C-terminus Family FY142_18040 PF07703 Alpha-2-macroglobulin bait region domain FY142_18040 PF07678 A-macroglobulin TED domain FY142_18040 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY142_18040 PF01835 MG2 domain FY142_18040 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY142_18040 PF17962 Bacterial macroglobulin domain 6 FY142_18040 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY142_18040 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY142_18040 PF00207 Alpha-2-macroglobulin family FY142_18045 PF03966 Trm112p-like protein FY142_18055 PF00085 Thioredoxin FY142_18090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY142_18090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_18090 PF01842 ACT domain FY142_18100 PF13505 Outer membrane protein beta-barrel domain FY142_18105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY142_18105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY142_18105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY142_18105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY142_18110 PF01434 Peptidase family M41 FY142_18110 PF06480 FtsH Extracellular FY142_18110 PF17862 AAA+ lid domain FY142_18110 PF00004 ATPase family associated with various cellular activities (AAA) FY142_18115 PF01171 PP-loop family FY142_18125 PF00691 OmpA family FY142_18130 PF07676 WD40-like Beta Propeller Repeat FY142_18130 PF04052 TolB amino-terminal domain FY142_18140 PF02472 Biopolymer transport protein ExbD/TolR FY142_18145 PF01618 MotA/TolQ/ExbB proton channel family FY142_18150 PF03061 Thioesterase superfamily FY142_18155 PF00293 NUDIX domain FY142_18160 PF00293 NUDIX domain FY142_18175 PF05491 RuvB C-terminal winged helix domain FY142_18175 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY142_18175 PF17864 RuvB AAA lid domain FY142_18180 PF07499 RuvA, C-terminal domain FY142_18180 PF01330 RuvA N terminal domain FY142_18185 PF02075 Crossover junction endodeoxyribonuclease RuvC FY142_18190 PF00672 HAMP domain FY142_18190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_18195 PF00296 Luciferase-like monooxygenase FY142_18200 PF01709 Transcriptional regulator FY142_18215 PF13277 YmdB-like protein FY142_18225 PF00571 CBS domain FY142_18225 PF03471 Transporter associated domain FY142_18225 PF01595 Cyclin M transmembrane N-terminal domain FY142_18245 PF00456 Transketolase, thiamine diphosphate binding domain FY142_18245 PF02780 Transketolase, C-terminal domain FY142_18245 PF02779 Transketolase, pyrimidine binding domain FY142_18250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY142_18250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY142_18260 PF03471 Transporter associated domain FY142_18260 PF00999 Sodium/hydrogen exchanger family FY142_18265 PF00162 Phosphoglycerate kinase FY142_18270 PF00274 Fructose-bisphosphate aldolase class-I FY142_18290 PF01197 Ribosomal protein L31 FY142_18295 PF00664 ABC transporter transmembrane region FY142_18295 PF00005 ABC transporter FY142_18300 PF00890 FAD binding domain FY142_18305 PF00691 OmpA family FY142_18305 PF01389 OmpA-like transmembrane domain FY142_18315 PF00459 Inositol monophosphatase family FY142_18345 PF00731 AIR carboxylase FY142_18350 PF02222 ATP-grasp domain FY142_18350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY142_18355 PF00444 Ribosomal protein L36 FY142_18365 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY142_18385 PF02887 Pyruvate kinase, alpha/beta domain FY142_18385 PF00224 Pyruvate kinase, barrel domain FY142_18390 PF05951 Bacterial protein of unknown function (DUF882) FY142_18395 PF02954 Bacterial regulatory protein, Fis family FY142_18395 PF00072 Response regulator receiver domain FY142_18395 PF00158 Sigma-54 interaction domain FY142_18400 PF01432 Peptidase family M3 FY142_18400 PF08439 Oligopeptidase F FY142_18405 PF01063 Amino-transferase class IV FY142_18410 PF00990 Diguanylate cyclase, GGDEF domain FY142_18415 PF03435 Saccharopine dehydrogenase NADP binding domain FY142_18415 PF16653 Saccharopine dehydrogenase C-terminal domain FY142_18425 PF02872 5'-nucleotidase, C-terminal domain FY142_18425 PF00149 Calcineurin-like phosphoesterase FY142_18430 PF00762 Ferrochelatase FY142_18435 PF01145 SPFH domain / Band 7 family FY142_18435 PF16200 C-terminal region of band_7 FY142_18445 PF01380 SIS domain FY142_18445 PF00571 CBS domain FY142_18460 PF00483 Nucleotidyl transferase FY142_18465 PF13406 Transglycosylase SLT domain FY142_18475 PF00072 Response regulator receiver domain FY142_18475 PF00486 Transcriptional regulatory protein, C terminal FY142_18480 PF00512 His Kinase A (phospho-acceptor) domain FY142_18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_18480 PF00672 HAMP domain FY142_18485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_18485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY142_18495 PF04898 Glutamate synthase central domain FY142_18495 PF01645 Conserved region in glutamate synthase FY142_18495 PF01493 GXGXG motif FY142_18495 PF00310 Glutamine amidotransferases class-II FY142_18500 PF01212 Beta-eliminating lyase FY142_18505 PF00486 Transcriptional regulatory protein, C terminal FY142_18505 PF00072 Response regulator receiver domain FY142_18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_18510 PF13492 GAF domain FY142_18510 PF00512 His Kinase A (phospho-acceptor) domain FY142_18510 PF02702 Osmosensitive K+ channel His kinase sensor domain FY142_18510 PF13493 Domain of unknown function (DUF4118) FY142_18515 PF02669 K+-transporting ATPase, c chain FY142_18525 PF03814 Potassium-transporting ATPase A subunit FY142_18535 PF00710 Asparaginase, N-terminal FY142_18535 PF17763 Glutaminase/Asparaginase C-terminal domain FY142_18540 PF00324 Amino acid permease FY142_18545 PF00206 Lyase FY142_18545 PF10415 Fumarase C C-terminus FY142_18550 PF07729 FCD domain FY142_18550 PF00392 Bacterial regulatory proteins, gntR family FY142_18555 PF00873 AcrB/AcrD/AcrF family FY142_18565 PF00529 HlyD membrane-fusion protein of T1SS FY142_18565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_18575 PF00392 Bacterial regulatory proteins, gntR family FY142_18575 PF07702 UTRA domain FY142_18590 PF00528 Binding-protein-dependent transport system inner membrane component FY142_18595 PF00005 ABC transporter FY142_18595 PF00571 CBS domain FY142_18600 PF00221 Aromatic amino acid lyase FY142_18605 PF00356 Bacterial regulatory proteins, lacI family FY142_18615 PF02653 Branched-chain amino acid transport system / permease component FY142_18620 PF00005 ABC transporter FY142_18625 PF01261 Xylose isomerase-like TIM barrel FY142_18630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_18630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_18635 PF01261 Xylose isomerase-like TIM barrel FY142_18640 PF01261 Xylose isomerase-like TIM barrel FY142_18660 PF00239 Resolvase, N terminal domain FY142_18660 PF02796 Helix-turn-helix domain of resolvase FY142_18670 PF00145 C-5 cytosine-specific DNA methylase FY142_18705 PF00701 Dihydrodipicolinate synthetase family FY142_18710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_18710 PF00005 ABC transporter FY142_18715 PF00528 Binding-protein-dependent transport system inner membrane component FY142_18715 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_18720 PF00528 Binding-protein-dependent transport system inner membrane component FY142_18725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_18735 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY142_18740 PF00465 Iron-containing alcohol dehydrogenase FY142_18745 PF07729 FCD domain FY142_18745 PF00392 Bacterial regulatory proteins, gntR family FY142_18760 PF03061 Thioesterase superfamily FY142_18780 PF14403 Circularly permuted ATP-grasp type 2 FY142_18780 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY142_18785 PF01841 Transglutaminase-like superfamily FY142_18785 PF08379 Bacterial transglutaminase-like N-terminal region FY142_18795 PF00005 ABC transporter FY142_18795 PF12848 ABC transporter FY142_18800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_18800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY142_18805 PF00392 Bacterial regulatory proteins, gntR family FY142_18805 PF07729 FCD domain FY142_18820 PF00528 Binding-protein-dependent transport system inner membrane component FY142_18825 PF00528 Binding-protein-dependent transport system inner membrane component FY142_18830 PF07470 Glycosyl Hydrolase Family 88 FY142_18835 PF17912 MalK OB fold domain FY142_18835 PF00005 ABC transporter FY142_18835 PF03459 TOBE domain FY142_18845 PF01547 Bacterial extracellular solute-binding protein FY142_18855 PF14602 Hexapeptide repeat of succinyl-transferase FY142_18855 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY142_18855 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_18860 PF01070 FMN-dependent dehydrogenase FY142_18875 PF08240 Alcohol dehydrogenase GroES-like domain FY142_18875 PF00107 Zinc-binding dehydrogenase FY142_18880 PF03737 Aldolase/RraA FY142_18885 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_18890 PF00005 ABC transporter FY142_18895 PF00528 Binding-protein-dependent transport system inner membrane component FY142_18900 PF00528 Binding-protein-dependent transport system inner membrane component FY142_18905 PF00106 short chain dehydrogenase FY142_18910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_18910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY142_18920 PF01370 NAD dependent epimerase/dehydratase family FY142_18925 PF01970 Tripartite tricarboxylate transporter TctA family FY142_18935 PF03737 Aldolase/RraA FY142_18940 PF03401 Tripartite tricarboxylate transporter family receptor FY142_18945 PF03466 LysR substrate binding domain FY142_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_18950 PF00892 EamA-like transporter family FY142_18955 PF00892 EamA-like transporter family FY142_18960 PF00364 Biotin-requiring enzyme FY142_18965 PF02785 Biotin carboxylase C-terminal domain FY142_18965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_18965 PF00289 Biotin carboxylase, N-terminal domain FY142_18975 PF02682 Carboxyltransferase domain, subdomain C and D FY142_18980 PF02626 Carboxyltransferase domain, subdomain A and B FY142_18985 PF03746 LamB/YcsF family FY142_18990 PF08402 TOBE domain FY142_18990 PF00005 ABC transporter FY142_19000 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19005 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19010 PF00155 Aminotransferase class I and II FY142_19015 PF00106 short chain dehydrogenase FY142_19015 PF00300 Histidine phosphatase superfamily (branch 1) FY142_19020 PF03466 LysR substrate binding domain FY142_19020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_19025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_19025 PF00672 HAMP domain FY142_19030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY142_19030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY142_19035 PF01791 DeoC/LacD family aldolase FY142_19040 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY142_19040 PF01266 FAD dependent oxidoreductase FY142_19045 PF00248 Aldo/keto reductase family FY142_19055 PF02653 Branched-chain amino acid transport system / permease component FY142_19060 PF00005 ABC transporter FY142_19065 PF13407 Periplasmic binding protein domain FY142_19085 PF00072 Response regulator receiver domain FY142_19095 PF00459 Inositol monophosphatase family FY142_19110 PF00011 Hsp20/alpha crystallin family FY142_19115 PF13593 SBF-like CPA transporter family (DUF4137) FY142_19120 PF03466 LysR substrate binding domain FY142_19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_19125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY142_19125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY142_19140 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19145 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19150 PF00005 ABC transporter FY142_19150 PF17912 MalK OB fold domain FY142_19155 PF00005 ABC transporter FY142_19155 PF17912 MalK OB fold domain FY142_19160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY142_19160 PF01266 FAD dependent oxidoreductase FY142_19165 PF00455 DeoR C terminal sensor domain FY142_19165 PF08220 DeoR-like helix-turn-helix domain FY142_19170 PF10414 Sirohaem synthase dimerisation region FY142_19170 PF14824 Sirohaem biosynthesis protein central FY142_19170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY142_19175 PF01568 Molydopterin dinucleotide binding domain FY142_19175 PF00384 Molybdopterin oxidoreductase FY142_19175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY142_19175 PF04324 BFD-like [2Fe-2S] binding domain FY142_19185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY142_19185 PF04324 BFD-like [2Fe-2S] binding domain FY142_19185 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_19185 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY142_19185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY142_19190 PF00005 ABC transporter FY142_19195 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19210 PF08376 Nitrate and nitrite sensing FY142_19210 PF03861 ANTAR domain FY142_19215 PF00392 Bacterial regulatory proteins, gntR family FY142_19215 PF07729 FCD domain FY142_19220 PF01566 Natural resistance-associated macrophage protein FY142_19225 PF03746 LamB/YcsF family FY142_19230 PF07286 Protein of unknown function (DUF1445) FY142_19235 PF02682 Carboxyltransferase domain, subdomain C and D FY142_19240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_19240 PF00364 Biotin-requiring enzyme FY142_19240 PF00289 Biotin carboxylase, N-terminal domain FY142_19240 PF02785 Biotin carboxylase C-terminal domain FY142_19245 PF00128 Alpha amylase, catalytic domain FY142_19245 PF02806 Alpha amylase, C-terminal all-beta domain FY142_19250 PF00376 MerR family regulatory protein FY142_19250 PF09278 MerR, DNA binding FY142_19255 PF00593 TonB dependent receptor FY142_19255 PF07715 TonB-dependent Receptor Plug Domain FY142_19260 PF02885 Glycosyl transferase family, helical bundle domain FY142_19260 PF00591 Glycosyl transferase family, a/b domain FY142_19265 PF06772 Bacterial low temperature requirement A protein (LtrA) FY142_19280 PF11800 Replication protein C C-terminal region FY142_19280 PF03428 Replication protein C N-terminal domain FY142_19285 PF02195 ParB-like nuclease domain FY142_19285 PF07506 RepB plasmid partitioning protein FY142_19290 PF13614 AAA domain FY142_19300 PF01042 Endoribonuclease L-PSP FY142_19305 PF14031 Putative serine dehydratase domain FY142_19305 PF01168 Alanine racemase, N-terminal domain FY142_19310 PF07364 Metallopeptidase family M81 FY142_19310 PF07171 MlrC C-terminus FY142_19315 PF05962 HutD FY142_19320 PF01175 Urocanase Rossmann-like domain FY142_19320 PF17392 Urocanase C-terminal domain FY142_19320 PF17391 Urocanase N-terminal domain FY142_19330 PF00221 Aromatic amino acid lyase FY142_19335 PF01979 Amidohydrolase family FY142_19340 PF01979 Amidohydrolase family FY142_19380 PF00005 ABC transporter FY142_19380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_19385 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19385 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_19390 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_19400 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19405 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19420 PF13533 Biotin-lipoyl like FY142_19435 PF12833 Helix-turn-helix domain FY142_19435 PF02311 AraC-like ligand binding domain FY142_19440 PF00440 Bacterial regulatory proteins, tetR family FY142_19470 PF01047 MarR family FY142_19475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_19475 PF03466 LysR substrate binding domain FY142_19480 PF04303 PrpF protein FY142_19490 PF00005 ABC transporter FY142_19495 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_19510 PF00672 HAMP domain FY142_19520 PF03275 UDP-galactopyranose mutase FY142_19530 PF00535 Glycosyl transferase family 2 FY142_19540 PF03466 LysR substrate binding domain FY142_19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_19545 PF07690 Major Facilitator Superfamily FY142_19555 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY142_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_19560 PF03466 LysR substrate binding domain FY142_19565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_19580 PF07969 Amidohydrolase family FY142_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_19600 PF03466 LysR substrate binding domain FY142_19605 PF07690 Major Facilitator Superfamily FY142_19615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_19615 PF00672 HAMP domain FY142_19615 PF00512 His Kinase A (phospho-acceptor) domain FY142_19620 PF00486 Transcriptional regulatory protein, C terminal FY142_19620 PF00072 Response regulator receiver domain FY142_19625 PF01569 PAP2 superfamily FY142_19670 PF13673 Acetyltransferase (GNAT) domain FY142_19675 PF06968 Biotin and Thiamin Synthesis associated domain FY142_19675 PF04055 Radical SAM superfamily FY142_19680 PF00155 Aminotransferase class I and II FY142_19690 PF00202 Aminotransferase class-III FY142_19695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY142_19695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY142_19710 PF00491 Arginase family FY142_19715 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY142_19720 PF00892 EamA-like transporter family FY142_19725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_19725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_19735 PF00672 HAMP domain FY142_19735 PF00211 Adenylate and Guanylate cyclase catalytic domain FY142_19745 PF07756 Protein of unknown function (DUF1612) FY142_19745 PF11972 HTH DNA binding domain FY142_19750 PF00083 Sugar (and other) transporter FY142_19755 PF00512 His Kinase A (phospho-acceptor) domain FY142_19755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_19760 PF00072 Response regulator receiver domain FY142_19760 PF00486 Transcriptional regulatory protein, C terminal FY142_19765 PF08019 Phosphoethanolamine transferase EptA/EptB FY142_19765 PF00884 Sulfatase FY142_19775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_19775 PF03466 LysR substrate binding domain FY142_19780 PF07715 TonB-dependent Receptor Plug Domain FY142_19780 PF00593 TonB dependent receptor FY142_19790 PF01032 FecCD transport family FY142_19795 PF00005 ABC transporter FY142_19805 PF00034 Cytochrome c FY142_19810 PF02631 RecX family FY142_19815 PF08450 SMP-30/Gluconolactonase/LRE-like region FY142_19825 PF02653 Branched-chain amino acid transport system / permease component FY142_19830 PF00005 ABC transporter FY142_19835 PF13407 Periplasmic binding protein domain FY142_19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_19840 PF07730 Histidine kinase FY142_19845 PF00196 Bacterial regulatory proteins, luxR family FY142_19845 PF00072 Response regulator receiver domain FY142_19855 PF07995 Glucose / Sorbosone dehydrogenase FY142_19865 PF04445 Putative SAM-dependent methyltransferase FY142_19870 PF00849 RNA pseudouridylate synthase FY142_19875 PF01205 Uncharacterized protein family UPF0029 FY142_19880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY142_19880 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_19885 PF00005 ABC transporter FY142_19885 PF00571 CBS domain FY142_19890 PF00528 Binding-protein-dependent transport system inner membrane component FY142_19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_19905 PF13426 PAS domain FY142_19905 PF00072 Response regulator receiver domain FY142_19910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_19915 PF02706 Chain length determinant protein FY142_19915 PF13807 G-rich domain on putative tyrosine kinase FY142_19915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY142_19920 PF00483 Nucleotidyl transferase FY142_19925 PF00535 Glycosyl transferase family 2 FY142_19930 PF00535 Glycosyl transferase family 2 FY142_19935 PF00535 Glycosyl transferase family 2 FY142_19945 PF00722 Glycosyl hydrolases family 16 FY142_19950 PF01757 Acyltransferase family FY142_19955 PF01943 Polysaccharide biosynthesis protein FY142_19960 PF00535 Glycosyl transferase family 2 FY142_19965 PF04230 Polysaccharide pyruvyl transferase FY142_19970 PF00535 Glycosyl transferase family 2 FY142_19975 PF11089 Exopolysaccharide production repressor FY142_19990 PF01165 Ribosomal protein S21 FY142_19995 PF01266 FAD dependent oxidoreductase FY142_20010 PF01571 Aminomethyltransferase folate-binding domain FY142_20010 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY142_20010 PF17806 Sarcosine oxidase A3 domain FY142_20010 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_20035 PF01575 MaoC like domain FY142_20040 PF18390 Glycogen debranching enzyme C-terminal domain FY142_20040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY142_20040 PF00128 Alpha amylase, catalytic domain FY142_20045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY142_20045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY142_20045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY142_20045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY142_20050 PF08323 Starch synthase catalytic domain FY142_20050 PF00534 Glycosyl transferases group 1 FY142_20055 PF00483 Nucleotidyl transferase FY142_20060 PF02806 Alpha amylase, C-terminal all-beta domain FY142_20060 PF00128 Alpha amylase, catalytic domain FY142_20060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY142_20065 PF00343 Carbohydrate phosphorylase FY142_20080 PF01177 Asp/Glu/Hydantoin racemase FY142_20085 PF01037 Lrp/AsnC ligand binding domain FY142_20095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY142_20095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY142_20105 PF08240 Alcohol dehydrogenase GroES-like domain FY142_20105 PF00107 Zinc-binding dehydrogenase FY142_20115 PF00664 ABC transporter transmembrane region FY142_20115 PF00005 ABC transporter FY142_20120 PF00664 ABC transporter transmembrane region FY142_20120 PF00005 ABC transporter FY142_20125 PF01654 Cytochrome bd terminal oxidase subunit I FY142_20130 PF02322 Cytochrome bd terminal oxidase subunit II FY142_20135 PF08173 Membrane bound YbgT-like protein FY142_20155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY142_20155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY142_20160 PF02910 Fumarate reductase flavoprotein C-term FY142_20160 PF00890 FAD binding domain FY142_20165 PF02445 Quinolinate synthetase A protein FY142_20195 PF02224 Cytidylate kinase FY142_20200 PF00575 S1 RNA binding domain FY142_20230 PF00106 short chain dehydrogenase FY142_20235 PF01321 Creatinase/Prolidase N-terminal domain FY142_20235 PF00557 Metallopeptidase family M24 FY142_20240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_20245 PF00528 Binding-protein-dependent transport system inner membrane component FY142_20250 PF00528 Binding-protein-dependent transport system inner membrane component FY142_20250 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_20255 PF00005 ABC transporter FY142_20255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_20260 PF00005 ABC transporter FY142_20260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_20265 PF01232 Mannitol dehydrogenase Rossmann domain FY142_20265 PF08125 Mannitol dehydrogenase C-terminal domain FY142_20270 PF00392 Bacterial regulatory proteins, gntR family FY142_20270 PF07729 FCD domain FY142_20275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_20275 PF13378 Enolase C-terminal domain-like FY142_20280 PF00296 Luciferase-like monooxygenase FY142_20295 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_20295 PF00005 ABC transporter FY142_20300 PF00005 ABC transporter FY142_20305 PF02653 Branched-chain amino acid transport system / permease component FY142_20310 PF11862 Domain of unknown function (DUF3382) FY142_20310 PF02653 Branched-chain amino acid transport system / permease component FY142_20315 PF05199 GMC oxidoreductase FY142_20315 PF00732 GMC oxidoreductase FY142_20320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY142_20320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY142_20325 PF13193 AMP-binding enzyme C-terminal domain FY142_20325 PF00501 AMP-binding enzyme FY142_20345 PF01011 PQQ enzyme repeat FY142_20350 PF05974 Domain of unknown function (DUF892) FY142_20360 PF01266 FAD dependent oxidoreductase FY142_20360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY142_20380 PF01965 DJ-1/PfpI family FY142_20400 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY142_20400 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY142_20405 PF16363 GDP-mannose 4,6 dehydratase FY142_20410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY142_20410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY142_20410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY142_20425 PF13409 Glutathione S-transferase, N-terminal domain FY142_20430 PF03466 LysR substrate binding domain FY142_20430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_20435 PF00171 Aldehyde dehydrogenase family FY142_20440 PF09084 NMT1/THI5 like FY142_20445 PF00528 Binding-protein-dependent transport system inner membrane component FY142_20450 PF00005 ABC transporter FY142_20455 PF14850 DNA-binding domain of Proline dehydrogenase FY142_20455 PF01619 Proline dehydrogenase FY142_20455 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY142_20455 PF00171 Aldehyde dehydrogenase family FY142_20460 PF01037 Lrp/AsnC ligand binding domain FY142_20465 PF04542 Sigma-70 region 2 FY142_20465 PF08281 Sigma-70, region 4 FY142_20475 PF00072 Response regulator receiver domain FY142_20480 PF08447 PAS fold FY142_20480 PF07536 HWE histidine kinase FY142_20480 PF13426 PAS domain FY142_20485 PF07536 HWE histidine kinase FY142_20485 PF13426 PAS domain FY142_20495 PF16363 GDP-mannose 4,6 dehydratase FY142_20510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY142_20515 PF03435 Saccharopine dehydrogenase NADP binding domain FY142_20515 PF16653 Saccharopine dehydrogenase C-terminal domain FY142_20520 PF00270 DEAD/DEAH box helicase FY142_20520 PF00271 Helicase conserved C-terminal domain FY142_20525 PF00696 Amino acid kinase family FY142_20525 PF01842 ACT domain FY142_20525 PF13840 ACT domain FY142_20530 PF01590 GAF domain FY142_20530 PF05524 PEP-utilising enzyme, N-terminal FY142_20530 PF00391 PEP-utilising enzyme, mobile domain FY142_20530 PF02896 PEP-utilising enzyme, TIM barrel domain FY142_20535 PF00472 RF-1 domain FY142_20535 PF03462 PCRF domain FY142_20540 PF17827 PrmC N-terminal domain FY142_20540 PF05175 Methyltransferase small domain FY142_20550 PF10431 C-terminal, D2-small domain, of ClpB protein FY142_20550 PF02861 Clp amino terminal domain, pathogenicity island component FY142_20550 PF17871 AAA lid domain FY142_20550 PF07724 AAA domain (Cdc48 subfamily) FY142_20550 PF00004 ATPase family associated with various cellular activities (AAA) FY142_20555 PF01464 Transglycosylase SLT domain FY142_20555 PF10145 Phage-related minor tail protein FY142_20555 PF01551 Peptidase family M23 FY142_20600 PF02525 Flavodoxin-like fold FY142_20610 PF01810 LysE type translocator FY142_20625 PF00440 Bacterial regulatory proteins, tetR family FY142_20630 PF00106 short chain dehydrogenase FY142_20635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY142_20640 PF00106 short chain dehydrogenase FY142_20645 PF00561 alpha/beta hydrolase fold FY142_20650 PF08240 Alcohol dehydrogenase GroES-like domain FY142_20650 PF00107 Zinc-binding dehydrogenase FY142_20680 PF00313 'Cold-shock' DNA-binding domain FY142_20700 PF00199 Catalase FY142_20700 PF06628 Catalase-related immune-responsive FY142_20700 PF18011 C-terminal domain found in long catalases FY142_20725 PF13426 PAS domain FY142_20725 PF13581 Histidine kinase-like ATPase domain FY142_20725 PF07536 HWE histidine kinase FY142_20730 PF01810 LysE type translocator FY142_20750 PF03466 LysR substrate binding domain FY142_20750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_20755 PF00107 Zinc-binding dehydrogenase FY142_20755 PF08240 Alcohol dehydrogenase GroES-like domain FY142_20760 PF00171 Aldehyde dehydrogenase family FY142_20780 PF00106 short chain dehydrogenase FY142_20785 PF03466 LysR substrate binding domain FY142_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_20800 PF01047 MarR family FY142_20820 PF00392 Bacterial regulatory proteins, gntR family FY142_20820 PF07729 FCD domain FY142_20830 PF00005 ABC transporter FY142_20835 PF00528 Binding-protein-dependent transport system inner membrane component FY142_20840 PF00528 Binding-protein-dependent transport system inner membrane component FY142_20845 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_20850 PF01968 Hydantoinase/oxoprolinase FY142_20850 PF05378 Hydantoinase/oxoprolinase N-terminal region FY142_20860 PF00155 Aminotransferase class I and II FY142_20865 PF00701 Dihydrodipicolinate synthetase family FY142_20870 PF01850 PIN domain FY142_20880 PF13173 AAA domain FY142_20880 PF13635 Domain of unknown function (DUF4143) FY142_20905 PF00291 Pyridoxal-phosphate dependent enzyme FY142_20910 PF00296 Luciferase-like monooxygenase FY142_20915 PF00296 Luciferase-like monooxygenase FY142_20925 PF00296 Luciferase-like monooxygenase FY142_20930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_20935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_20940 PF00528 Binding-protein-dependent transport system inner membrane component FY142_20945 PF00528 Binding-protein-dependent transport system inner membrane component FY142_20945 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_20950 PF00005 ABC transporter FY142_20950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_20955 PF00296 Luciferase-like monooxygenase FY142_20965 PF00005 ABC transporter FY142_20970 PF02653 Branched-chain amino acid transport system / permease component FY142_20975 PF02653 Branched-chain amino acid transport system / permease component FY142_20980 PF00296 Luciferase-like monooxygenase FY142_20990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_20990 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY142_20995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_20995 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_20995 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY142_21000 PF00248 Aldo/keto reductase family FY142_21015 PF02653 Branched-chain amino acid transport system / permease component FY142_21020 PF00005 ABC transporter FY142_21025 PF13407 Periplasmic binding protein domain FY142_21035 PF02910 Fumarate reductase flavoprotein C-term FY142_21035 PF00890 FAD binding domain FY142_21045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_21045 PF00005 ABC transporter FY142_21050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_21050 PF00005 ABC transporter FY142_21055 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21055 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_21060 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_21090 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21095 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21100 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_21115 PF13784 Fic/DOC family N-terminal FY142_21115 PF02661 Fic/DOC family FY142_21140 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21140 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_21150 PF04717 Type VI secretion system, phage-baseplate injector FY142_21170 PF05593 RHS Repeat FY142_21170 PF03527 RHS protein FY142_21190 PF00072 Response regulator receiver domain FY142_21190 PF00486 Transcriptional regulatory protein, C terminal FY142_21195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_21195 PF00512 His Kinase A (phospho-acceptor) domain FY142_21195 PF11808 Phosphate regulon sensor protein PhoR FY142_21195 PF00989 PAS fold FY142_21200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_21205 PF00005 ABC transporter FY142_21205 PF12704 MacB-like periplasmic core domain FY142_21205 PF02687 FtsX-like permease family FY142_21215 PF01638 HxlR-like helix-turn-helix FY142_21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_21225 PF03466 LysR substrate binding domain FY142_21230 PF00753 Metallo-beta-lactamase superfamily FY142_21250 PF01554 MatE FY142_21265 PF00091 Tubulin/FtsZ family, GTPase domain FY142_21265 PF12327 FtsZ family, C-terminal domain FY142_21270 PF00109 Beta-ketoacyl synthase, N-terminal domain FY142_21270 PF02801 Beta-ketoacyl synthase, C-terminal domain FY142_21275 PF00440 Bacterial regulatory proteins, tetR family FY142_21280 PF13533 Biotin-lipoyl like FY142_21285 PF00873 AcrB/AcrD/AcrF family FY142_21290 PF02798 Glutathione S-transferase, N-terminal domain FY142_21295 PF00106 short chain dehydrogenase FY142_21305 PF02733 Dak1 domain FY142_21310 PF01037 Lrp/AsnC ligand binding domain FY142_21315 PF01053 Cys/Met metabolism PLP-dependent enzyme FY142_21330 PF03358 NADPH-dependent FMN reductase FY142_21335 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY142_21340 PF00296 Luciferase-like monooxygenase FY142_21350 PF00005 ABC transporter FY142_21350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_21355 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_21355 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21360 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_21370 PF01568 Molydopterin dinucleotide binding domain FY142_21370 PF00384 Molybdopterin oxidoreductase FY142_21375 PF01565 FAD binding domain FY142_21375 PF02913 FAD linked oxidases, C-terminal domain FY142_21380 PF01323 DSBA-like thioredoxin domain FY142_21395 PF00881 Nitroreductase family FY142_21400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_21415 PF03466 LysR substrate binding domain FY142_21415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_21425 PF00155 Aminotransferase class I and II FY142_21425 PF00392 Bacterial regulatory proteins, gntR family FY142_21440 PF02567 Phenazine biosynthesis-like protein FY142_21445 PF00293 NUDIX domain FY142_21450 PF05163 DinB family FY142_21455 PF03466 LysR substrate binding domain FY142_21455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_21465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_21465 PF03466 LysR substrate binding domain FY142_21470 PF00857 Isochorismatase family FY142_21475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_21475 PF03466 LysR substrate binding domain FY142_21480 PF00795 Carbon-nitrogen hydrolase FY142_21495 PF08402 TOBE domain FY142_21495 PF00005 ABC transporter FY142_21500 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21505 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21510 PF01266 FAD dependent oxidoreductase FY142_21510 PF04324 BFD-like [2Fe-2S] binding domain FY142_21515 PF04324 BFD-like [2Fe-2S] binding domain FY142_21515 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_21520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY142_21520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY142_21535 PF00005 ABC transporter FY142_21540 PF01032 FecCD transport family FY142_21545 PF01032 FecCD transport family FY142_21550 PF01497 Periplasmic binding protein FY142_21555 PF07715 TonB-dependent Receptor Plug Domain FY142_21560 PF03928 Haem-degrading FY142_21565 PF00356 Bacterial regulatory proteins, lacI family FY142_21570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_21570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_21575 PF01144 Coenzyme A transferase FY142_21580 PF00378 Enoyl-CoA hydratase/isomerase FY142_21585 PF00171 Aldehyde dehydrogenase family FY142_21590 PF01547 Bacterial extracellular solute-binding protein FY142_21595 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21600 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21605 PF03459 TOBE domain FY142_21605 PF17912 MalK OB fold domain FY142_21605 PF00005 ABC transporter FY142_21610 PF00732 GMC oxidoreductase FY142_21610 PF05199 GMC oxidoreductase FY142_21615 PF00732 GMC oxidoreductase FY142_21615 PF05199 GMC oxidoreductase FY142_21620 PF00890 FAD binding domain FY142_21620 PF02910 Fumarate reductase flavoprotein C-term FY142_21635 PF00034 Cytochrome c FY142_21640 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY142_21645 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY142_21650 PF00510 Cytochrome c oxidase subunit III FY142_21655 PF00510 Cytochrome c oxidase subunit III FY142_21665 PF03466 LysR substrate binding domain FY142_21665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_21675 PF12704 MacB-like periplasmic core domain FY142_21675 PF00005 ABC transporter FY142_21675 PF02687 FtsX-like permease family FY142_21695 PF00486 Transcriptional regulatory protein, C terminal FY142_21695 PF00072 Response regulator receiver domain FY142_21700 PF00512 His Kinase A (phospho-acceptor) domain FY142_21700 PF00672 HAMP domain FY142_21700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_21710 PF00196 Bacterial regulatory proteins, luxR family FY142_21730 PF00005 ABC transporter FY142_21730 PF08402 TOBE domain FY142_21740 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21745 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21750 PF01177 Asp/Glu/Hydantoin racemase FY142_21760 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY142_21760 PF00480 ROK family FY142_21765 PF13407 Periplasmic binding protein domain FY142_21770 PF02653 Branched-chain amino acid transport system / permease component FY142_21775 PF00005 ABC transporter FY142_21780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY142_21780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY142_21785 PF00455 DeoR C terminal sensor domain FY142_21785 PF08220 DeoR-like helix-turn-helix domain FY142_21810 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21815 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21820 PF17912 MalK OB fold domain FY142_21820 PF00005 ABC transporter FY142_21840 PF00817 impB/mucB/samB family FY142_21840 PF11799 impB/mucB/samB family C-terminal domain FY142_21845 PF01979 Amidohydrolase family FY142_21855 PF07690 Major Facilitator Superfamily FY142_21880 PF00005 ABC transporter FY142_21895 PF01979 Amidohydrolase family FY142_21895 PF13382 Adenine deaminase C-terminal domain FY142_21900 PF08240 Alcohol dehydrogenase GroES-like domain FY142_21900 PF00107 Zinc-binding dehydrogenase FY142_21905 PF01638 HxlR-like helix-turn-helix FY142_21925 PF00355 Rieske [2Fe-2S] domain FY142_21925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY142_21930 PF00970 Oxidoreductase FAD-binding domain FY142_21930 PF00111 2Fe-2S iron-sulfur cluster binding domain FY142_21930 PF00175 Oxidoreductase NAD-binding domain FY142_21940 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY142_21940 PF03807 NADP oxidoreductase coenzyme F420-dependent FY142_21945 PF05544 Proline racemase FY142_21950 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21955 PF00528 Binding-protein-dependent transport system inner membrane component FY142_21960 PF00005 ABC transporter FY142_21960 PF00571 CBS domain FY142_21970 PF01266 FAD dependent oxidoreductase FY142_21975 PF00171 Aldehyde dehydrogenase family FY142_21980 PF00701 Dihydrodipicolinate synthetase family FY142_21995 PF01266 FAD dependent oxidoreductase FY142_22005 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_22005 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY142_22005 PF01571 Aminomethyltransferase folate-binding domain FY142_22005 PF17806 Sarcosine oxidase A3 domain FY142_22015 PF00464 Serine hydroxymethyltransferase FY142_22020 PF00551 Formyl transferase FY142_22035 PF00440 Bacterial regulatory proteins, tetR family FY142_22040 PF00245 Alkaline phosphatase FY142_22050 PF00005 ABC transporter FY142_22065 PF00107 Zinc-binding dehydrogenase FY142_22065 PF08240 Alcohol dehydrogenase GroES-like domain FY142_22070 PF12833 Helix-turn-helix domain FY142_22075 PF13407 Periplasmic binding protein domain FY142_22080 PF00005 ABC transporter FY142_22085 PF02653 Branched-chain amino acid transport system / permease component FY142_22090 PF00106 short chain dehydrogenase FY142_22095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY142_22095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY142_22105 PF00083 Sugar (and other) transporter FY142_22105 PF08946 Osmosensory transporter coiled coil FY142_22115 PF02563 Polysaccharide biosynthesis/export protein FY142_22120 PF00069 Protein kinase domain FY142_22120 PF07238 PilZ domain FY142_22130 PF06761 Intracellular multiplication and human macrophage-killing FY142_22130 PF06744 Type VI secretion protein IcmF C-terminal FY142_22130 PF14331 ImcF-related N-terminal domain FY142_22135 PF00691 OmpA family FY142_22140 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY142_22155 PF05947 Type VI secretion system, TssF FY142_22175 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY142_22180 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY142_22190 PF10431 C-terminal, D2-small domain, of ClpB protein FY142_22190 PF00004 ATPase family associated with various cellular activities (AAA) FY142_22190 PF17871 AAA lid domain FY142_22190 PF07724 AAA domain (Cdc48 subfamily) FY142_22210 PF04717 Type VI secretion system, phage-baseplate injector FY142_22235 PF00563 EAL domain FY142_22235 PF13188 PAS domain FY142_22235 PF03707 Bacterial signalling protein N terminal repeat FY142_22235 PF00990 Diguanylate cyclase, GGDEF domain FY142_22240 PF00459 Inositol monophosphatase family FY142_22255 PF00356 Bacterial regulatory proteins, lacI family FY142_22260 PF03741 Integral membrane protein TerC family FY142_22260 PF03471 Transporter associated domain FY142_22275 PF00005 ABC transporter FY142_22275 PF03459 TOBE domain FY142_22275 PF17912 MalK OB fold domain FY142_22280 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22285 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22290 PF13416 Bacterial extracellular solute-binding protein FY142_22295 PF01261 Xylose isomerase-like TIM barrel FY142_22300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_22300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_22305 PF00356 Bacterial regulatory proteins, lacI family FY142_22320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_22320 PF03466 LysR substrate binding domain FY142_22330 PF13407 Periplasmic binding protein domain FY142_22335 PF00005 ABC transporter FY142_22340 PF02653 Branched-chain amino acid transport system / permease component FY142_22345 PF02653 Branched-chain amino acid transport system / permease component FY142_22350 PF00356 Bacterial regulatory proteins, lacI family FY142_22360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_22360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_22380 PF00034 Cytochrome c FY142_22395 PF07732 Multicopper oxidase FY142_22395 PF00394 Multicopper oxidase FY142_22415 PF00092 von Willebrand factor type A domain FY142_22420 PF07728 AAA domain (dynein-related subfamily) FY142_22420 PF08406 CbbQ/NirQ/NorQ C-terminal FY142_22425 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY142_22430 PF00034 Cytochrome c FY142_22440 PF00510 Cytochrome c oxidase subunit III FY142_22450 PF02441 Flavoprotein FY142_22455 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY142_22460 PF04343 Protein of unknown function, DUF488 FY142_22470 PF01136 Peptidase family U32 FY142_22495 PF00005 ABC transporter FY142_22505 PF06796 Periplasmic nitrate reductase protein NapE FY142_22520 PF01568 Molydopterin dinucleotide binding domain FY142_22520 PF00384 Molybdopterin oxidoreductase FY142_22520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY142_22525 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY142_22530 PF03264 NapC/NirT cytochrome c family, N-terminal region FY142_22540 PF01648 4'-phosphopantetheinyl transferase superfamily FY142_22540 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY142_22550 PF00550 Phosphopantetheine attachment site FY142_22550 PF00857 Isochorismatase family FY142_22555 PF00501 AMP-binding enzyme FY142_22555 PF13193 AMP-binding enzyme C-terminal domain FY142_22560 PF00425 chorismate binding enzyme FY142_22565 PF13193 AMP-binding enzyme C-terminal domain FY142_22565 PF00501 AMP-binding enzyme FY142_22565 PF00668 Condensation domain FY142_22565 PF00550 Phosphopantetheine attachment site FY142_22570 PF00975 Thioesterase domain FY142_22570 PF00501 AMP-binding enzyme FY142_22570 PF00668 Condensation domain FY142_22570 PF00550 Phosphopantetheine attachment site FY142_22575 PF00975 Thioesterase domain FY142_22575 PF00501 AMP-binding enzyme FY142_22575 PF13193 AMP-binding enzyme C-terminal domain FY142_22575 PF00668 Condensation domain FY142_22575 PF00550 Phosphopantetheine attachment site FY142_22585 PF04954 Siderophore-interacting protein FY142_22585 PF08021 Siderophore-interacting FAD-binding domain FY142_22595 PF01032 FecCD transport family FY142_22600 PF01032 FecCD transport family FY142_22605 PF00005 ABC transporter FY142_22610 PF00296 Luciferase-like monooxygenase FY142_22620 PF07715 TonB-dependent Receptor Plug Domain FY142_22625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_22625 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_22625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_22630 PF03466 LysR substrate binding domain FY142_22630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_22635 PF00356 Bacterial regulatory proteins, lacI family FY142_22645 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22655 PF08402 TOBE domain FY142_22655 PF00005 ABC transporter FY142_22665 PF13382 Adenine deaminase C-terminal domain FY142_22665 PF01979 Amidohydrolase family FY142_22670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_22670 PF03466 LysR substrate binding domain FY142_22675 PF07690 Major Facilitator Superfamily FY142_22680 PF01546 Peptidase family M20/M25/M40 FY142_22680 PF07687 Peptidase dimerisation domain FY142_22690 PF01244 Membrane dipeptidase (Peptidase family M19) FY142_22695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_22700 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22705 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_22705 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_22710 PF00005 ABC transporter FY142_22715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_22715 PF00005 ABC transporter FY142_22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_22720 PF03466 LysR substrate binding domain FY142_22725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_22730 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22735 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_22735 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22740 PF01425 Amidase FY142_22745 PF01965 DJ-1/PfpI family FY142_22755 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22755 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_22760 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_22770 PF01546 Peptidase family M20/M25/M40 FY142_22770 PF07687 Peptidase dimerisation domain FY142_22775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_22775 PF00005 ABC transporter FY142_22780 PF04198 Putative sugar-binding domain FY142_22790 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22795 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22800 PF00005 ABC transporter FY142_22800 PF08402 TOBE domain FY142_22810 PF01232 Mannitol dehydrogenase Rossmann domain FY142_22810 PF08125 Mannitol dehydrogenase C-terminal domain FY142_22815 PF13419 Haloacid dehalogenase-like hydrolase FY142_22820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY142_22820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY142_22835 PF10576 Iron-sulfur binding domain of endonuclease III FY142_22835 PF00633 Helix-hairpin-helix motif FY142_22835 PF00730 HhH-GPD superfamily base excision DNA repair protein FY142_22845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY142_22845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY142_22860 PF13936 Helix-turn-helix domain FY142_22860 PF04198 Putative sugar-binding domain FY142_22865 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY142_22870 PF09339 IclR helix-turn-helix domain FY142_22870 PF01614 Bacterial transcriptional regulator FY142_22885 PF00950 ABC 3 transport family FY142_22890 PF00950 ABC 3 transport family FY142_22895 PF00005 ABC transporter FY142_22900 PF01297 Zinc-uptake complex component A periplasmic FY142_22910 PF01734 Patatin-like phospholipase FY142_22915 PF01336 OB-fold nucleic acid binding domain FY142_22915 PF00152 tRNA synthetases class II (D, K and N) FY142_22920 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY142_22925 PF02080 TrkA-C domain FY142_22925 PF03600 Citrate transporter FY142_22930 PF03741 Integral membrane protein TerC family FY142_22930 PF03471 Transporter associated domain FY142_22935 PF00440 Bacterial regulatory proteins, tetR family FY142_22940 PF13533 Biotin-lipoyl like FY142_22945 PF07690 Major Facilitator Superfamily FY142_22955 PF00356 Bacterial regulatory proteins, lacI family FY142_22955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY142_22960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY142_22960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY142_22965 PF01261 Xylose isomerase-like TIM barrel FY142_22970 PF00232 Glycosyl hydrolase family 1 FY142_22975 PF00881 Nitroreductase family FY142_22980 PF00005 ABC transporter FY142_22980 PF09383 NIL domain FY142_22985 PF00528 Binding-protein-dependent transport system inner membrane component FY142_22990 PF03180 NLPA lipoprotein FY142_22995 PF13188 PAS domain FY142_22995 PF03707 Bacterial signalling protein N terminal repeat FY142_22995 PF00990 Diguanylate cyclase, GGDEF domain FY142_22995 PF00563 EAL domain FY142_23000 PF17773 UPF0176 acylphosphatase like domain FY142_23000 PF00581 Rhodanese-like domain FY142_23010 PF01928 CYTH domain FY142_23015 PF01081 KDPG and KHG aldolase FY142_23035 PF03824 High-affinity nickel-transport protein FY142_23055 PF13505 Outer membrane protein beta-barrel domain FY142_23075 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY142_23075 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY142_23080 PF02633 Creatinine amidohydrolase FY142_23085 PF01047 MarR family FY142_23090 PF00356 Bacterial regulatory proteins, lacI family FY142_23095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY142_23095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_23100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_23100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_23105 PF04962 KduI/IolB family FY142_23110 PF01261 Xylose isomerase-like TIM barrel FY142_23115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY142_23115 PF00205 Thiamine pyrophosphate enzyme, central domain FY142_23115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY142_23120 PF00294 pfkB family carbohydrate kinase FY142_23130 PF00005 ABC transporter FY142_23135 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_23135 PF00005 ABC transporter FY142_23150 PF13458 Periplasmic binding protein FY142_23165 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_23165 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23170 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_23180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_23180 PF00005 ABC transporter FY142_23195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_23195 PF01261 Xylose isomerase-like TIM barrel FY142_23205 PF01220 Dehydroquinase class II FY142_23210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY142_23210 PF08501 Shikimate dehydrogenase substrate binding domain FY142_23215 PF00005 ABC transporter FY142_23220 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_23225 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_23230 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23235 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23240 PF00206 Lyase FY142_23240 PF10397 Adenylosuccinate lyase C-terminus FY142_23245 PF00775 Dioxygenase FY142_23250 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY142_23250 PF00775 Dioxygenase FY142_23255 PF02627 Carboxymuconolactone decarboxylase family FY142_23260 PF00561 alpha/beta hydrolase fold FY142_23265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_23265 PF03466 LysR substrate binding domain FY142_23270 PF01494 FAD binding domain FY142_23280 PF01614 Bacterial transcriptional regulator FY142_23280 PF09339 IclR helix-turn-helix domain FY142_23285 PF01144 Coenzyme A transferase FY142_23290 PF01144 Coenzyme A transferase FY142_23295 PF02803 Thiolase, C-terminal domain FY142_23295 PF00108 Thiolase, N-terminal domain FY142_23300 PF00356 Bacterial regulatory proteins, lacI family FY142_23305 PF13407 Periplasmic binding protein domain FY142_23310 PF13407 Periplasmic binding protein domain FY142_23315 PF01261 Xylose isomerase-like TIM barrel FY142_23320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_23320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_23330 PF00356 Bacterial regulatory proteins, lacI family FY142_23335 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23340 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23345 PF00005 ABC transporter FY142_23345 PF17912 MalK OB fold domain FY142_23355 PF07470 Glycosyl Hydrolase Family 88 FY142_23375 PF07690 Major Facilitator Superfamily FY142_23380 PF07715 TonB-dependent Receptor Plug Domain FY142_23380 PF00593 TonB dependent receptor FY142_23385 PF16220 Domain of unknown function (DUF4880) FY142_23385 PF04773 FecR protein FY142_23395 PF00480 ROK family FY142_23395 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY142_23400 PF03009 Glycerophosphoryl diester phosphodiesterase family FY142_23405 PF00106 short chain dehydrogenase FY142_23410 PF12852 Cupin FY142_23410 PF12833 Helix-turn-helix domain FY142_23420 PF00037 4Fe-4S binding domain FY142_23420 PF11953 Domain of unknown function (DUF3470) FY142_23425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY142_23425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY142_23440 PF00248 Aldo/keto reductase family FY142_23445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_23445 PF03466 LysR substrate binding domain FY142_23455 PF00005 ABC transporter FY142_23455 PF00664 ABC transporter transmembrane region FY142_23460 PF03275 UDP-galactopyranose mutase FY142_23470 PF00535 Glycosyl transferase family 2 FY142_23470 PF01501 Glycosyl transferase family 8 FY142_23475 PF13580 SIS domain FY142_23480 PF01370 NAD dependent epimerase/dehydratase family FY142_23510 PF05045 Rhamnan synthesis protein F FY142_23525 PF00483 Nucleotidyl transferase FY142_23530 PF04321 RmlD substrate binding domain FY142_23535 PF16363 GDP-mannose 4,6 dehydratase FY142_23540 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY142_23545 PF00580 UvrD/REP helicase N-terminal domain FY142_23545 PF13361 UvrD-like helicase C-terminal domain FY142_23555 PF00356 Bacterial regulatory proteins, lacI family FY142_23560 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_23560 PF01571 Aminomethyltransferase folate-binding domain FY142_23560 PF17806 Sarcosine oxidase A3 domain FY142_23560 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY142_23570 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23575 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23580 PF00005 ABC transporter FY142_23580 PF17912 MalK OB fold domain FY142_23580 PF03459 TOBE domain FY142_23585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_23585 PF00005 ABC transporter FY142_23590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_23590 PF00005 ABC transporter FY142_23595 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23595 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_23600 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23605 PF07729 FCD domain FY142_23605 PF00392 Bacterial regulatory proteins, gntR family FY142_23610 PF03786 D-mannonate dehydratase (UxuA) FY142_23615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_23625 PF13188 PAS domain FY142_23625 PF00563 EAL domain FY142_23625 PF00990 Diguanylate cyclase, GGDEF domain FY142_23625 PF03707 Bacterial signalling protein N terminal repeat FY142_23640 PF02735 Ku70/Ku80 beta-barrel domain FY142_23645 PF13298 DNA polymerase Ligase (LigD) FY142_23645 PF04679 ATP dependent DNA ligase C terminal region FY142_23645 PF01068 ATP dependent DNA ligase domain FY142_23650 PF02735 Ku70/Ku80 beta-barrel domain FY142_23655 PF01384 Phosphate transporter family FY142_23660 PF01865 Protein of unknown function DUF47 FY142_23670 PF00873 AcrB/AcrD/AcrF family FY142_23675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY142_23675 PF00529 HlyD membrane-fusion protein of T1SS FY142_23680 PF00486 Transcriptional regulatory protein, C terminal FY142_23680 PF00072 Response regulator receiver domain FY142_23685 PF00672 HAMP domain FY142_23685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_23685 PF00512 His Kinase A (phospho-acceptor) domain FY142_23695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_23695 PF03466 LysR substrate binding domain FY142_23700 PF00141 Peroxidase FY142_23705 PF12833 Helix-turn-helix domain FY142_23710 PF00593 TonB dependent receptor FY142_23710 PF07715 TonB-dependent Receptor Plug Domain FY142_23720 PF01032 FecCD transport family FY142_23725 PF01032 FecCD transport family FY142_23730 PF00005 ABC transporter FY142_23735 PF03466 LysR substrate binding domain FY142_23735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_23740 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY142_23745 PF00884 Sulfatase FY142_23745 PF12411 Choline sulfatase enzyme C terminal FY142_23750 PF00294 pfkB family carbohydrate kinase FY142_23755 PF08402 TOBE domain FY142_23755 PF00005 ABC transporter FY142_23760 PF00206 Lyase FY142_23760 PF14698 Argininosuccinate lyase C-terminal FY142_23765 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23770 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23775 PF13416 Bacterial extracellular solute-binding protein FY142_23780 PF00480 ROK family FY142_23805 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY142_23805 PF02056 Family 4 glycosyl hydrolase FY142_23810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_23815 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23820 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_23820 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23825 PF00005 ABC transporter FY142_23825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_23830 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY142_23830 PF02056 Family 4 glycosyl hydrolase FY142_23835 PF13533 Biotin-lipoyl like FY142_23840 PF00005 ABC transporter FY142_23860 PF00072 Response regulator receiver domain FY142_23865 PF12327 FtsZ family, C-terminal domain FY142_23865 PF00091 Tubulin/FtsZ family, GTPase domain FY142_23870 PF00392 Bacterial regulatory proteins, gntR family FY142_23870 PF07729 FCD domain FY142_23875 PF00701 Dihydrodipicolinate synthetase family FY142_23880 PF02615 Malate/L-lactate dehydrogenase FY142_23890 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23895 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23900 PF00005 ABC transporter FY142_23905 PF01266 FAD dependent oxidoreductase FY142_23915 PF05544 Proline racemase FY142_23920 PF00356 Bacterial regulatory proteins, lacI family FY142_23930 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_23935 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23940 PF00528 Binding-protein-dependent transport system inner membrane component FY142_23945 PF00005 ABC transporter FY142_23950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY142_23950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY142_23955 PF00990 Diguanylate cyclase, GGDEF domain FY142_23955 PF00563 EAL domain FY142_23955 PF03707 Bacterial signalling protein N terminal repeat FY142_23960 PF02530 Porin subfamily FY142_23965 PF01613 Flavin reductase like domain FY142_23970 PF03466 LysR substrate binding domain FY142_23970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_23980 PF00037 4Fe-4S binding domain FY142_23980 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY142_23980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY142_23985 PF01568 Molydopterin dinucleotide binding domain FY142_23985 PF00037 4Fe-4S binding domain FY142_23985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY142_23985 PF00384 Molybdopterin oxidoreductase FY142_23985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY142_23995 PF07690 Major Facilitator Superfamily FY142_24000 PF00701 Dihydrodipicolinate synthetase family FY142_24005 PF08450 SMP-30/Gluconolactonase/LRE-like region FY142_24010 PF07729 FCD domain FY142_24010 PF00392 Bacterial regulatory proteins, gntR family FY142_24015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_24020 PF00528 Binding-protein-dependent transport system inner membrane component FY142_24025 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_24025 PF00528 Binding-protein-dependent transport system inner membrane component FY142_24030 PF00005 ABC transporter FY142_24030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_24035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_24035 PF13378 Enolase C-terminal domain-like FY142_24045 PF00392 Bacterial regulatory proteins, gntR family FY142_24045 PF07729 FCD domain FY142_24050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_24055 PF00528 Binding-protein-dependent transport system inner membrane component FY142_24060 PF00528 Binding-protein-dependent transport system inner membrane component FY142_24060 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_24070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_24070 PF00005 ABC transporter FY142_24075 PF00459 Inositol monophosphatase family FY142_24085 PF17850 CysA C-terminal regulatory domain FY142_24085 PF00005 ABC transporter FY142_24090 PF00528 Binding-protein-dependent transport system inner membrane component FY142_24110 PF05532 CsbD-like FY142_24120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY142_24120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY142_24125 PF03401 Tripartite tricarboxylate transporter family receptor FY142_24130 PF00664 ABC transporter transmembrane region FY142_24130 PF00005 ABC transporter FY142_24135 PF00005 ABC transporter FY142_24145 PF00577 Outer membrane usher protein FY142_24145 PF13953 PapC C-terminal domain FY142_24145 PF13954 PapC N-terminal domain FY142_24160 PF00330 Aconitase family (aconitate hydratase) FY142_24160 PF06434 Aconitate hydratase 2 N-terminus FY142_24160 PF11791 Aconitate B N-terminal domain FY142_24165 PF00132 Bacterial transferase hexapeptide (six repeats) FY142_24175 PF08240 Alcohol dehydrogenase GroES-like domain FY142_24175 PF00107 Zinc-binding dehydrogenase FY142_24180 PF01590 GAF domain FY142_24180 PF02954 Bacterial regulatory protein, Fis family FY142_24180 PF00158 Sigma-54 interaction domain FY142_24190 PF00356 Bacterial regulatory proteins, lacI family FY142_24200 PF00005 ABC transporter FY142_24205 PF02653 Branched-chain amino acid transport system / permease component FY142_24210 PF02653 Branched-chain amino acid transport system / permease component FY142_24215 PF01261 Xylose isomerase-like TIM barrel FY142_24220 PF00485 Phosphoribulokinase / Uridine kinase family FY142_24225 PF01261 Xylose isomerase-like TIM barrel FY142_24250 PF06472 ABC transporter transmembrane region 2 FY142_24250 PF00005 ABC transporter FY142_24315 PF13614 AAA domain FY142_24315 PF00376 MerR family regulatory protein FY142_24320 PF07506 RepB plasmid partitioning protein FY142_24320 PF02195 ParB-like nuclease domain FY142_24325 PF03428 Replication protein C N-terminal domain FY142_24325 PF11800 Replication protein C C-terminal region FY142_24335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_24335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_24340 PF00005 ABC transporter FY142_24345 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_24350 PF00356 Bacterial regulatory proteins, lacI family FY142_24385 PF00487 Fatty acid desaturase FY142_24395 PF00313 'Cold-shock' DNA-binding domain FY142_24430 PF07517 SecA DEAD-like domain FY142_24430 PF02810 SEC-C motif FY142_24430 PF01043 SecA preprotein cross-linking domain FY142_24430 PF07516 SecA Wing and Scaffold domain FY142_24470 PF13087 AAA domain FY142_24470 PF13091 PLD-like domain FY142_24505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_24505 PF00512 His Kinase A (phospho-acceptor) domain FY142_24505 PF00989 PAS fold FY142_24510 PF00664 ABC transporter transmembrane region FY142_24510 PF00005 ABC transporter FY142_24520 PF01022 Bacterial regulatory protein, arsR family FY142_24550 PF01965 DJ-1/PfpI family FY142_24550 PF12833 Helix-turn-helix domain FY142_24555 PF07690 Major Facilitator Superfamily FY142_24560 PF07690 Major Facilitator Superfamily FY142_24565 PF01047 MarR family FY142_24580 PF07690 Major Facilitator Superfamily FY142_24610 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY142_24615 PF00561 alpha/beta hydrolase fold FY142_24625 PF04752 ChaC-like protein FY142_24630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_24630 PF03466 LysR substrate binding domain FY142_24645 PF00011 Hsp20/alpha crystallin family FY142_24690 PF04956 TrbC/VIRB2 family FY142_24695 PF05101 Type IV secretory pathway, VirB3-like protein FY142_24700 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY142_24705 PF07996 Type IV secretion system proteins FY142_24715 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY142_24725 PF04335 VirB8 protein FY142_24730 PF03524 Conjugal transfer protein FY142_24735 PF03743 Bacterial conjugation TrbI-like protein FY142_24740 PF00437 Type II/IV secretion system protein FY142_24760 PF03230 Antirestriction protein FY142_24840 PF05406 WGR domain FY142_24855 PF02534 Type IV secretory system Conjugative DNA transfer FY142_24870 PF17841 BID domain of Bartonella effector protein (Bep) FY142_24870 PF03389 MobA/MobL family FY142_24870 PF01443 Viral (Superfamily 1) RNA helicase FY142_24875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_24875 PF03466 LysR substrate binding domain FY142_24900 PF03472 Autoinducer binding domain FY142_24900 PF00196 Bacterial regulatory proteins, luxR family FY142_24905 PF00765 Autoinducer synthase FY142_24915 PF00486 Transcriptional regulatory protein, C terminal FY142_24915 PF00072 Response regulator receiver domain FY142_24940 PF00795 Carbon-nitrogen hydrolase FY142_24950 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY142_24955 PF08402 TOBE domain FY142_24955 PF00005 ABC transporter FY142_24960 PF00528 Binding-protein-dependent transport system inner membrane component FY142_24965 PF00528 Binding-protein-dependent transport system inner membrane component FY142_24980 PF13635 Domain of unknown function (DUF4143) FY142_24980 PF13173 AAA domain FY142_24985 PF02785 Biotin carboxylase C-terminal domain FY142_24985 PF00289 Biotin carboxylase, N-terminal domain FY142_24985 PF02436 Conserved carboxylase domain FY142_24985 PF00682 HMGL-like FY142_24985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY142_24985 PF00364 Biotin-requiring enzyme FY142_24990 PF14552 Tautomerase enzyme FY142_24995 PF03328 HpcH/HpaI aldolase/citrate lyase family FY142_25000 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY142_25010 PF01614 Bacterial transcriptional regulator FY142_25010 PF09339 IclR helix-turn-helix domain FY142_25020 PF00005 ABC transporter FY142_25025 PF00005 ABC transporter FY142_25035 PF11862 Domain of unknown function (DUF3382) FY142_25035 PF02653 Branched-chain amino acid transport system / permease component FY142_25055 PF08502 LeuA allosteric (dimerisation) domain FY142_25055 PF00682 HMGL-like FY142_25060 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25065 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25070 PF00480 ROK family FY142_25070 PF01047 MarR family FY142_25075 PF00128 Alpha amylase, catalytic domain FY142_25080 PF01546 Peptidase family M20/M25/M40 FY142_25080 PF07687 Peptidase dimerisation domain FY142_25085 PF01261 Xylose isomerase-like TIM barrel FY142_25090 PF17912 MalK OB fold domain FY142_25090 PF00005 ABC transporter FY142_25100 PF00480 ROK family FY142_25105 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25110 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25115 PF01547 Bacterial extracellular solute-binding protein FY142_25120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY142_25120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY142_25135 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY142_25150 PF00005 ABC transporter FY142_25155 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25160 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25165 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY142_25170 PF00005 ABC transporter FY142_25170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_25175 PF00005 ABC transporter FY142_25175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_25180 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25180 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_25185 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_25195 PF03737 Aldolase/RraA FY142_25200 PF03466 LysR substrate binding domain FY142_25200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_25205 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY142_25210 PF01546 Peptidase family M20/M25/M40 FY142_25210 PF07687 Peptidase dimerisation domain FY142_25215 PF01156 Inosine-uridine preferring nucleoside hydrolase FY142_25235 PF00857 Isochorismatase family FY142_25250 PF02678 Pirin FY142_25250 PF17954 Quercetinase C-terminal cupin domain FY142_25255 PF03358 NADPH-dependent FMN reductase FY142_25260 PF00561 alpha/beta hydrolase fold FY142_25280 PF13533 Biotin-lipoyl like FY142_25285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_25285 PF03466 LysR substrate binding domain FY142_25290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY142_25295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_25295 PF03466 LysR substrate binding domain FY142_25310 PF00857 Isochorismatase family FY142_25315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_25315 PF03466 LysR substrate binding domain FY142_25325 PF03551 Transcriptional regulator PadR-like family FY142_25385 PF02653 Branched-chain amino acid transport system / permease component FY142_25390 PF00005 ABC transporter FY142_25395 PF00005 ABC transporter FY142_25395 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_25405 PF12833 Helix-turn-helix domain FY142_25405 PF14525 AraC-binding-like domain FY142_25465 PF00392 Bacterial regulatory proteins, gntR family FY142_25465 PF07729 FCD domain FY142_25470 PF00775 Dioxygenase FY142_25470 PF04444 Catechol dioxygenase N terminus FY142_25475 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY142_25480 PF03328 HpcH/HpaI aldolase/citrate lyase family FY142_25490 PF01571 Aminomethyltransferase folate-binding domain FY142_25495 PF02219 Methylenetetrahydrofolate reductase FY142_25500 PF00551 Formyl transferase FY142_25510 PF00107 Zinc-binding dehydrogenase FY142_25510 PF08240 Alcohol dehydrogenase GroES-like domain FY142_25520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY142_25520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY142_25520 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY142_25520 PF02770 Acyl-CoA dehydrogenase, middle domain FY142_25525 PF00378 Enoyl-CoA hydratase/isomerase FY142_25530 PF00501 AMP-binding enzyme FY142_25530 PF13193 AMP-binding enzyme C-terminal domain FY142_25535 PF00171 Aldehyde dehydrogenase family FY142_25540 PF07690 Major Facilitator Superfamily FY142_25555 PF00990 Diguanylate cyclase, GGDEF domain FY142_25555 PF17158 Membrane-associated sensor, integral membrane domain FY142_25575 PF12802 MarR family FY142_25585 PF13458 Periplasmic binding protein FY142_25590 PF02653 Branched-chain amino acid transport system / permease component FY142_25600 PF00005 ABC transporter FY142_25600 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_25605 PF00005 ABC transporter FY142_25615 PF00171 Aldehyde dehydrogenase family FY142_25620 PF01546 Peptidase family M20/M25/M40 FY142_25620 PF07687 Peptidase dimerisation domain FY142_25625 PF00202 Aminotransferase class-III FY142_25630 PF00171 Aldehyde dehydrogenase family FY142_25635 PF08450 SMP-30/Gluconolactonase/LRE-like region FY142_25640 PF01261 Xylose isomerase-like TIM barrel FY142_25645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY142_25645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY142_25665 PF01979 Amidohydrolase family FY142_25670 PF00480 ROK family FY142_25670 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY142_25675 PF02653 Branched-chain amino acid transport system / permease component FY142_25680 PF13407 Periplasmic binding protein domain FY142_25685 PF00005 ABC transporter FY142_25705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_25705 PF03466 LysR substrate binding domain FY142_25710 PF07690 Major Facilitator Superfamily FY142_25720 PF00135 Carboxylesterase family FY142_25730 PF00135 Carboxylesterase family FY142_25740 PF00005 ABC transporter FY142_25745 PF02653 Branched-chain amino acid transport system / permease component FY142_25750 PF00135 Carboxylesterase family FY142_25760 PF04303 PrpF protein FY142_25765 PF03737 Aldolase/RraA FY142_25770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY142_25775 PF02585 GlcNAc-PI de-N-acetylase FY142_25790 PF00005 ABC transporter FY142_25790 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY142_25795 PF00005 ABC transporter FY142_25800 PF13458 Periplasmic binding protein FY142_25810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_25810 PF03466 LysR substrate binding domain FY142_25815 PF09339 IclR helix-turn-helix domain FY142_25815 PF01614 Bacterial transcriptional regulator FY142_25825 PF13378 Enolase C-terminal domain-like FY142_25825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY142_25835 PF00005 ABC transporter FY142_25835 PF08402 TOBE domain FY142_25840 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25845 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25855 PF07690 Major Facilitator Superfamily FY142_25890 PF03928 Haem-degrading FY142_25910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_25915 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25920 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_25920 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_25925 PF00005 ABC transporter FY142_25935 PF00296 Luciferase-like monooxygenase FY142_25945 PF00528 Binding-protein-dependent transport system inner membrane component FY142_25950 PF00005 ABC transporter FY142_25955 PF05199 GMC oxidoreductase FY142_25955 PF00732 GMC oxidoreductase FY142_25960 PF00171 Aldehyde dehydrogenase family FY142_25975 PF00392 Bacterial regulatory proteins, gntR family FY142_25975 PF07729 FCD domain FY142_25980 PF04324 BFD-like [2Fe-2S] binding domain FY142_25980 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_25990 PF01266 FAD dependent oxidoreductase FY142_26000 PF01958 Domain of unknown function DUF108 FY142_26000 PF03447 Homoserine dehydrogenase, NAD binding domain FY142_26005 PF01042 Endoribonuclease L-PSP FY142_26010 PF01548 Transposase FY142_26010 PF02371 Transposase IS116/IS110/IS902 family FY142_26050 PF00857 Isochorismatase family FY142_26060 PF00440 Bacterial regulatory proteins, tetR family FY142_26065 PF00005 ABC transporter FY142_26070 PF01032 FecCD transport family FY142_26075 PF01032 FecCD transport family FY142_26085 PF00394 Multicopper oxidase FY142_26085 PF07732 Multicopper oxidase FY142_26085 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY142_26085 PF07731 Multicopper oxidase FY142_26090 PF02885 Glycosyl transferase family, helical bundle domain FY142_26090 PF00591 Glycosyl transferase family, a/b domain FY142_26095 PF07715 TonB-dependent Receptor Plug Domain FY142_26095 PF00593 TonB dependent receptor FY142_26130 PF03551 Transcriptional regulator PadR-like family FY142_26165 PF07732 Multicopper oxidase FY142_26165 PF07731 Multicopper oxidase FY142_26165 PF00394 Multicopper oxidase FY142_26185 PF01209 ubiE/COQ5 methyltransferase family FY142_26200 PF04079 Segregation and condensation complex subunit ScpB FY142_26210 PF00589 Phage integrase family FY142_26220 PF13614 AAA domain FY142_26225 PF02195 ParB-like nuclease domain FY142_26225 PF07506 RepB plasmid partitioning protein FY142_26230 PF11800 Replication protein C C-terminal region FY142_26230 PF03428 Replication protein C N-terminal domain FY142_26235 PF00239 Resolvase, N terminal domain FY142_26240 PF07756 Protein of unknown function (DUF1612) FY142_26240 PF11972 HTH DNA binding domain FY142_26260 PF00239 Resolvase, N terminal domain FY142_26260 PF02796 Helix-turn-helix domain of resolvase FY142_26265 PF07690 Major Facilitator Superfamily FY142_26275 PF08808 RES domain FY142_26310 PF02899 Phage integrase, N-terminal SAM-like domain FY142_26310 PF00589 Phage integrase family FY142_26315 PF00293 NUDIX domain FY142_26330 PF13018 Extended Signal Peptide of Type V secretion system FY142_26330 PF13332 Hemagglutinin repeat FY142_26330 PF05860 haemagglutination activity domain FY142_26330 PF03543 Yersinia/Haemophilus virulence surface antigen FY142_26330 PF02661 Fic/DOC family FY142_26355 PF02195 ParB-like nuclease domain FY142_26355 PF17762 HTH domain found in ParB protein FY142_26380 PF08274 PhnA Zinc-Ribbon FY142_26380 PF03831 PhnA domain FY142_26400 PF01810 LysE type translocator FY142_26450 PF00293 NUDIX domain FY142_26465 PF05284 Protein of unknown function (DUF736) FY142_26470 PF00216 Bacterial DNA-binding protein FY142_26490 PF02534 Type IV secretory system Conjugative DNA transfer FY142_26495 PF06412 Conjugal transfer protein TraD FY142_26500 PF07820 TraC-like protein FY142_26505 PF17841 BID domain of Bartonella effector protein (Bep) FY142_26505 PF03389 MobA/MobL family FY142_26505 PF01443 Viral (Superfamily 1) RNA helicase FY142_26510 PF10502 Signal peptidase, peptidase S26 FY142_26515 PF00795 Carbon-nitrogen hydrolase FY142_26520 PF06871 TraH_2 FY142_26525 PF09228 Prokaryotic Transcriptional repressor TraM FY142_26530 PF08447 PAS fold FY142_26530 PF13426 PAS domain FY142_26530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY142_26540 PF03472 Autoinducer binding domain FY142_26540 PF00196 Bacterial regulatory proteins, luxR family FY142_26545 PF00128 Alpha amylase, catalytic domain FY142_26550 PF02690 Na+/Pi-cotransporter FY142_26560 PF00455 DeoR C terminal sensor domain FY142_26560 PF08220 DeoR-like helix-turn-helix domain FY142_26565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_26570 PF00005 ABC transporter FY142_26570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_26575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_26575 PF00005 ABC transporter FY142_26580 PF00528 Binding-protein-dependent transport system inner membrane component FY142_26585 PF00528 Binding-protein-dependent transport system inner membrane component FY142_26585 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_26590 PF03009 Glycerophosphoryl diester phosphodiesterase family FY142_26595 PF00459 Inositol monophosphatase family FY142_26620 PF00067 Cytochrome P450 FY142_26625 PF00067 Cytochrome P450 FY142_26640 PF06903 VirK protein FY142_26675 PF00512 His Kinase A (phospho-acceptor) domain FY142_26675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY142_26680 PF01464 Transglycosylase SLT domain FY142_26685 PF04956 TrbC/VIRB2 family FY142_26690 PF05101 Type IV secretory pathway, VirB3-like protein FY142_26695 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY142_26705 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY142_26710 PF17413 Outer membrane lipoprotein virB7 FY142_26715 PF04335 VirB8 protein FY142_26720 PF03524 Conjugal transfer protein FY142_26725 PF03743 Bacterial conjugation TrbI-like protein FY142_26730 PF00437 Type II/IV secretion system protein FY142_26735 PF00072 Response regulator receiver domain FY142_26735 PF00486 Transcriptional regulatory protein, C terminal FY142_26740 PF07181 VirC2 protein FY142_26745 PF07015 VirC1 protein FY142_26750 PF07328 T-DNA border endonuclease VirD1 FY142_26755 PF03432 Relaxase/Mobilisation nuclease domain FY142_26765 PF02534 Type IV secretory system Conjugative DNA transfer FY142_26785 PF12189 Single-strand DNA-binding protein FY142_26790 PF07229 VirE2 FY142_26810 PF05717 IS66 Orf2 like protein FY142_26815 PF03472 Autoinducer binding domain FY142_26815 PF00196 Bacterial regulatory proteins, luxR family FY142_26830 PF00459 Inositol monophosphatase family FY142_26865 PF02027 RolB/RolC glucosidase family FY142_26870 PF01425 Amidase FY142_26875 PF02027 RolB/RolC glucosidase family FY142_26875 PF01593 Flavin containing amine oxidoreductase FY142_26885 PF02027 RolB/RolC glucosidase family FY142_26890 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY142_26900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY142_26900 PF00005 ABC transporter FY142_26905 PF12911 N-terminal TM domain of oligopeptide transport permease C FY142_26905 PF00528 Binding-protein-dependent transport system inner membrane component FY142_26910 PF00528 Binding-protein-dependent transport system inner membrane component FY142_26915 PF01266 FAD dependent oxidoreductase FY142_26920 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY142_26920 PF17806 Sarcosine oxidase A3 domain FY142_26930 PF01266 FAD dependent oxidoreductase FY142_26935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_26935 PF03466 LysR substrate binding domain FY142_26940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY142_26945 PF05378 Hydantoinase/oxoprolinase N-terminal region FY142_26945 PF01968 Hydantoinase/oxoprolinase FY142_26955 PF00710 Asparaginase, N-terminal FY142_26955 PF17763 Glutaminase/Asparaginase C-terminal domain FY142_26960 PF03466 LysR substrate binding domain FY142_26960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY142_26970 PF00528 Binding-protein-dependent transport system inner membrane component FY142_26980 PF00005 ABC transporter FY142_26980 PF08402 TOBE domain FY142_26990 PF03743 Bacterial conjugation TrbI-like protein FY142_27000 PF03524 Conjugal transfer protein FY142_27005 PF04335 VirB8 protein FY142_27010 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY142_27015 PF10907 Protein of unknown function (DUF2749) FY142_27025 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY142_27030 PF05101 Type IV secretory pathway, VirB3-like protein FY142_27035 PF04956 TrbC/VIRB2 family FY142_27040 PF00437 Type II/IV secretion system protein FY142_27045 PF00765 Autoinducer synthase