locus-tag class description FY143_00005 PF00308 Bacterial dnaA protein FY143_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY143_00005 PF11638 DnaA N-terminal domain FY143_00010 PF06969 HemN C-terminal domain FY143_00010 PF04055 Radical SAM superfamily FY143_00015 PF01725 Ham1 family FY143_00020 PF01138 3' exoribonuclease family, domain 1 FY143_00020 PF03725 3' exoribonuclease family, domain 2 FY143_00025 PF01628 HrcA protein C terminal domain FY143_00030 PF01025 GrpE FY143_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY143_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY143_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY143_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY143_00045 PF04963 Sigma-54 factor, core binding domain FY143_00045 PF04552 Sigma-54, DNA binding domain FY143_00050 PF00005 ABC transporter FY143_00055 PF03968 OstA-like protein FY143_00065 PF01343 Peptidase family S49 FY143_00070 PF00216 Bacterial DNA-binding protein FY143_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY143_00080 PF02926 THUMP domain FY143_00080 PF01170 Putative RNA methylase family UPF0020 FY143_00085 PF00588 SpoU rRNA Methylase family FY143_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY143_00090 PF01252 Signal peptidase (SPase) II FY143_00095 PF00672 HAMP domain FY143_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_00095 PF00512 His Kinase A (phospho-acceptor) domain FY143_00095 PF01627 Hpt domain FY143_00095 PF00072 Response regulator receiver domain FY143_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY143_00105 PF00488 MutS domain V FY143_00105 PF05190 MutS family domain IV FY143_00105 PF05192 MutS domain III FY143_00105 PF05188 MutS domain II FY143_00105 PF01624 MutS domain I FY143_00110 PF01842 ACT domain FY143_00110 PF08335 GlnD PII-uridylyltransferase FY143_00110 PF01966 HD domain FY143_00110 PF01909 Nucleotidyltransferase domain FY143_00115 PF03023 Lipid II flippase MurJ FY143_00125 PF00579 tRNA synthetases class I (W and Y) FY143_00135 PF01106 NifU-like domain FY143_00140 PF00814 Glycoprotease family FY143_00145 PF00583 Acetyltransferase (GNAT) family FY143_00145 PF00814 Glycoprotease family FY143_00150 PF01475 Ferric uptake regulator family FY143_00155 PF01553 Acyltransferase FY143_00160 PF04055 Radical SAM superfamily FY143_00160 PF00919 Uncharacterized protein family UPF0004 FY143_00160 PF01938 TRAM domain FY143_00165 PF02562 PhoH-like protein FY143_00170 PF02130 Uncharacterized protein family UPF0054 FY143_00175 PF00571 CBS domain FY143_00175 PF03471 Transporter associated domain FY143_00180 PF00795 Carbon-nitrogen hydrolase FY143_00185 PF01381 Helix-turn-helix FY143_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY143_00190 PF02772 S-adenosylmethionine synthetase, central domain FY143_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY143_00195 PF02390 Putative methyltransferase FY143_00200 PF00294 pfkB family carbohydrate kinase FY143_00205 PF02646 RmuC family FY143_00210 PF01327 Polypeptide deformylase FY143_00215 PF02911 Formyl transferase, C-terminal domain FY143_00215 PF00551 Formyl transferase FY143_00220 PF01416 tRNA pseudouridine synthase FY143_00230 PF01546 Peptidase family M20/M25/M40 FY143_00230 PF07687 Peptidase dimerisation domain FY143_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY143_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY143_00245 PF00672 HAMP domain FY143_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY143_00255 PF00011 Hsp20/alpha crystallin family FY143_00280 PF00696 Amino acid kinase family FY143_00290 PF01926 50S ribosome-binding GTPase FY143_00295 PF14849 YidC periplasmic domain FY143_00295 PF02096 60Kd inner membrane protein FY143_00300 PF00825 Ribonuclease P FY143_00305 PF00468 Ribosomal protein L34 FY143_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_00310 PF00672 HAMP domain FY143_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_00315 PF00512 His Kinase A (phospho-acceptor) domain FY143_00325 PF01209 ubiE/COQ5 methyltransferase family FY143_00330 PF00005 ABC transporter FY143_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY143_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY143_00350 PF00149 Calcineurin-like phosphoesterase FY143_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY143_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY143_00365 PF05544 Proline racemase FY143_00370 PF01979 Amidohydrolase family FY143_00375 PF00156 Phosphoribosyl transferase domain FY143_00380 PF00294 pfkB family carbohydrate kinase FY143_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY143_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY143_00400 PF00342 Phosphoglucose isomerase FY143_00405 PF13193 AMP-binding enzyme C-terminal domain FY143_00405 PF00501 AMP-binding enzyme FY143_00410 PF00005 ABC transporter FY143_00410 PF08402 TOBE domain FY143_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY143_00425 PF07715 TonB-dependent Receptor Plug Domain FY143_00425 PF00593 TonB dependent receptor FY143_00445 PF01679 Proteolipid membrane potential modulator FY143_00465 PF03976 Polyphosphate kinase 2 (PPK2) FY143_00470 PF16736 Single Cache-like FY143_00470 PF00989 PAS fold FY143_00470 PF00512 His Kinase A (phospho-acceptor) domain FY143_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_00475 PF12849 PBP superfamily domain FY143_00480 PF00528 Binding-protein-dependent transport system inner membrane component FY143_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY143_00490 PF00005 ABC transporter FY143_00495 PF01895 PhoU domain FY143_00500 PF00072 Response regulator receiver domain FY143_00500 PF00486 Transcriptional regulatory protein, C terminal FY143_00510 PF00202 Aminotransferase class-III FY143_00515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY143_00515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY143_00520 PF01430 Hsp33 protein FY143_00525 PF04379 ApaG domain FY143_00530 PF01053 Cys/Met metabolism PLP-dependent enzyme FY143_00540 PF00692 dUTPase FY143_00550 PF00230 Major intrinsic protein FY143_00590 PF00196 Bacterial regulatory proteins, luxR family FY143_00590 PF00072 Response regulator receiver domain FY143_00600 PF01180 Dihydroorotate dehydrogenase FY143_00615 PF08241 Methyltransferase domain FY143_00635 PF02082 Transcriptional regulator FY143_00640 PF00270 DEAD/DEAH box helicase FY143_00640 PF08494 DEAD/H associated FY143_00640 PF00271 Helicase conserved C-terminal domain FY143_00660 PF01925 Sulfite exporter TauE/SafE FY143_00670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY143_00670 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY143_00670 PF02770 Acyl-CoA dehydrogenase, middle domain FY143_00670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_00675 PF02803 Thiolase, C-terminal domain FY143_00675 PF00108 Thiolase, N-terminal domain FY143_00680 PF00378 Enoyl-CoA hydratase/isomerase FY143_00680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY143_00680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY143_00720 PF03334 Na+/H+ antiporter subunit FY143_00725 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY143_00730 PF01899 Na+/H+ ion antiporter subunit FY143_00735 PF00361 Proton-conducting membrane transporter FY143_00740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY143_00745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY143_00745 PF00361 Proton-conducting membrane transporter FY143_00745 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY143_00745 PF13244 Domain of unknown function (DUF4040) FY143_00755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_00765 PF00072 Response regulator receiver domain FY143_00770 PF01584 CheW-like domain FY143_00770 PF02895 Signal transducing histidine kinase, homodimeric domain FY143_00770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_00770 PF01627 Hpt domain FY143_00775 PF01739 CheR methyltransferase, SAM binding domain FY143_00775 PF03705 CheR methyltransferase, all-alpha domain FY143_00780 PF01339 CheB methylesterase FY143_00780 PF00072 Response regulator receiver domain FY143_00785 PF00072 Response regulator receiver domain FY143_00790 PF03975 CheD chemotactic sensory transduction FY143_00800 PF01514 Secretory protein of YscJ/FliF family FY143_00800 PF08345 Flagellar M-ring protein C-terminal FY143_00805 PF00196 Bacterial regulatory proteins, luxR family FY143_00805 PF03472 Autoinducer binding domain FY143_00815 PF00672 HAMP domain FY143_00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_00820 PF00072 Response regulator receiver domain FY143_00820 PF00512 His Kinase A (phospho-acceptor) domain FY143_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_00820 PF00672 HAMP domain FY143_00820 PF01627 Hpt domain FY143_00825 PF01741 Large-conductance mechanosensitive channel, MscL FY143_00830 PF00155 Aminotransferase class I and II FY143_00835 PF01370 NAD dependent epimerase/dehydratase family FY143_00845 PF03884 DNA gyrase inhibitor YacG FY143_00850 PF02545 Maf-like protein FY143_00855 PF01176 Translation initiation factor 1A / IF-1 FY143_00865 PF06793 Uncharacterised protein family (UPF0262) FY143_00870 PF00815 Histidinol dehydrogenase FY143_00880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY143_00895 PF00700 Bacterial flagellin C-terminal helical region FY143_00895 PF00669 Bacterial flagellin N-terminal helical region FY143_00900 PF00700 Bacterial flagellin C-terminal helical region FY143_00900 PF00669 Bacterial flagellin N-terminal helical region FY143_00905 PF00700 Bacterial flagellin C-terminal helical region FY143_00905 PF00669 Bacterial flagellin N-terminal helical region FY143_00910 PF00813 FliP family FY143_00920 PF02107 Flagellar L-ring protein FY143_00930 PF02119 Flagellar P-ring protein FY143_00935 PF13144 Chaperone for flagella basal body P-ring formation FY143_00940 PF00460 Flagella basal body rod protein FY143_00940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY143_00945 PF02049 Flagellar hook-basal body complex protein FliE FY143_00950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY143_00955 PF00460 Flagella basal body rod protein FY143_00965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY143_00965 PF18269 T3SS EscN ATPase C-terminal domain FY143_00970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY143_00970 PF00460 Flagella basal body rod protein FY143_00980 PF01618 MotA/TolQ/ExbB proton channel family FY143_00985 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY143_00990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY143_00995 PF14841 FliG middle domain FY143_00995 PF14842 FliG N-terminal domain FY143_00995 PF01706 FliG C-terminal domain FY143_01000 PF01312 FlhB HrpN YscU SpaS Family FY143_01010 PF00669 Bacterial flagellin N-terminal helical region FY143_01010 PF00700 Bacterial flagellin C-terminal helical region FY143_01020 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY143_01020 PF00691 OmpA family FY143_01030 PF02120 Flagellar hook-length control protein FliK FY143_01040 PF00486 Transcriptional regulatory protein, C terminal FY143_01045 PF07559 Flagellar basal body protein FlaE FY143_01045 PF00460 Flagella basal body rod protein FY143_01045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY143_01065 PF07378 Flagellar protein FlbT FY143_01070 PF03963 Flagellar hook capping protein - N-terminal region FY143_01075 PF01313 Bacterial export proteins, family 3 FY143_01080 PF00771 FHIPEP family FY143_01085 PF01311 Bacterial export proteins, family 1 FY143_01120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY143_01120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY143_01125 PF00356 Bacterial regulatory proteins, lacI family FY143_01130 PF01547 Bacterial extracellular solute-binding protein FY143_01135 PF00528 Binding-protein-dependent transport system inner membrane component FY143_01140 PF00528 Binding-protein-dependent transport system inner membrane component FY143_01145 PF00128 Alpha amylase, catalytic domain FY143_01150 PF00005 ABC transporter FY143_01150 PF17912 MalK OB fold domain FY143_01150 PF03459 TOBE domain FY143_01165 PF00920 Dehydratase family FY143_01170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY143_01175 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY143_01175 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY143_01185 PF01266 FAD dependent oxidoreductase FY143_01190 PF00120 Glutamine synthetase, catalytic domain FY143_01215 PF00463 Isocitrate lyase family FY143_01220 PF06114 IrrE N-terminal-like domain FY143_01220 PF09856 Predicted transcriptional regulator (DUF2083) FY143_01220 PF01381 Helix-turn-helix FY143_01225 PF13416 Bacterial extracellular solute-binding protein FY143_01230 PF08402 TOBE domain FY143_01230 PF00005 ABC transporter FY143_01235 PF00528 Binding-protein-dependent transport system inner membrane component FY143_01240 PF00528 Binding-protein-dependent transport system inner membrane component FY143_01250 PF00512 His Kinase A (phospho-acceptor) domain FY143_01250 PF00989 PAS fold FY143_01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_01250 PF13188 PAS domain FY143_01250 PF13426 PAS domain FY143_01260 PF02541 Ppx/GppA phosphatase family FY143_01265 PF01728 FtsJ-like methyltransferase FY143_01270 PF07690 Major Facilitator Superfamily FY143_01275 PF00753 Metallo-beta-lactamase superfamily FY143_01280 PF00478 IMP dehydrogenase / GMP reductase domain FY143_01280 PF00571 CBS domain FY143_01290 PF08240 Alcohol dehydrogenase GroES-like domain FY143_01290 PF00107 Zinc-binding dehydrogenase FY143_01295 PF01738 Dienelactone hydrolase family FY143_01300 PF00994 Probable molybdopterin binding domain FY143_01305 PF08544 GHMP kinases C terminal FY143_01305 PF00288 GHMP kinases N terminal domain FY143_01315 PF00348 Polyprenyl synthetase FY143_01330 PF01343 Peptidase family S49 FY143_01330 PF06965 Na+/H+ antiporter 1 FY143_01340 PF02091 Glycyl-tRNA synthetase alpha subunit FY143_01350 PF04011 LemA family FY143_01355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY143_01365 PF02092 Glycyl-tRNA synthetase beta subunit FY143_01365 PF05746 DALR anticodon binding domain FY143_01385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_01385 PF00672 HAMP domain FY143_01395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY143_01395 PF02843 Phosphoribosylglycinamide synthetase, C domain FY143_01395 PF02844 Phosphoribosylglycinamide synthetase, N domain FY143_01400 PF16921 Tex protein YqgF-like domain FY143_01400 PF17674 HHH domain FY143_01400 PF09371 Tex-like protein N-terminal domain FY143_01400 PF00575 S1 RNA binding domain FY143_01415 PF01040 UbiA prenyltransferase family FY143_01430 PF03466 LysR substrate binding domain FY143_01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_01440 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY143_01445 PF04452 RNA methyltransferase FY143_01450 PF01384 Phosphate transporter family FY143_01460 PF05116 Sucrose-6F-phosphate phosphohydrolase FY143_01465 PF13439 Glycosyltransferase Family 4 FY143_01465 PF00534 Glycosyl transferases group 1 FY143_01470 PF00392 Bacterial regulatory proteins, gntR family FY143_01470 PF07729 FCD domain FY143_01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_01480 PF03466 LysR substrate binding domain FY143_01485 PF01565 FAD binding domain FY143_01485 PF02913 FAD linked oxidases, C-terminal domain FY143_01490 PF01565 FAD binding domain FY143_01495 PF13183 4Fe-4S dicluster domain FY143_01495 PF02754 Cysteine-rich domain FY143_01505 PF03734 L,D-transpeptidase catalytic domain FY143_01505 PF17969 L,D-transpeptidase C-terminal domain FY143_01510 PF03352 Methyladenine glycosylase FY143_01520 PF03601 Conserved hypothetical protein 698 FY143_01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_01525 PF03466 LysR substrate binding domain FY143_01545 PF03129 Anticodon binding domain FY143_01545 PF13393 Histidyl-tRNA synthetase FY143_01555 PF13393 Histidyl-tRNA synthetase FY143_01560 PF01634 ATP phosphoribosyltransferase FY143_01565 PF07681 DoxX FY143_01575 PF00118 TCP-1/cpn60 chaperonin family FY143_01580 PF00166 Chaperonin 10 Kd subunit FY143_01590 PF01687 Riboflavin kinase FY143_01590 PF06574 FAD synthetase FY143_01595 PF08264 Anticodon-binding domain of tRNA FY143_01595 PF00133 tRNA synthetases class I (I, L, M and V) FY143_01605 PF14437 MafB19-like deaminase FY143_01610 PF00849 RNA pseudouridylate synthase FY143_01610 PF01479 S4 domain FY143_01620 PF01734 Patatin-like phospholipase FY143_01625 PF02254 TrkA-N domain FY143_01625 PF00999 Sodium/hydrogen exchanger family FY143_01630 PF01523 Putative modulator of DNA gyrase FY143_01645 PF00534 Glycosyl transferases group 1 FY143_01645 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY143_01655 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY143_01665 PF01119 DNA mismatch repair protein, C-terminal domain FY143_01665 PF08676 MutL C terminal dimerisation domain FY143_01670 PF00512 His Kinase A (phospho-acceptor) domain FY143_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_01670 PF01627 Hpt domain FY143_01670 PF00989 PAS fold FY143_01670 PF00072 Response regulator receiver domain FY143_01670 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_01675 PF00563 EAL domain FY143_01675 PF00990 Diguanylate cyclase, GGDEF domain FY143_01675 PF13188 PAS domain FY143_01675 PF03707 Bacterial signalling protein N terminal repeat FY143_01680 PF08450 SMP-30/Gluconolactonase/LRE-like region FY143_01685 PF01081 KDPG and KHG aldolase FY143_01690 PF05035 2-keto-3-deoxy-galactonokinase FY143_01705 PF03472 Autoinducer binding domain FY143_01705 PF00196 Bacterial regulatory proteins, luxR family FY143_01715 PF10609 NUBPL iron-transfer P-loop NTPase FY143_01720 PF01544 CorA-like Mg2+ transporter protein FY143_01725 PF02705 K+ potassium transporter FY143_01735 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FY143_01740 PF00119 ATP synthase A chain FY143_01745 PF00137 ATP synthase subunit C FY143_01750 PF00430 ATP synthase B/B' CF(0) FY143_01755 PF00430 ATP synthase B/B' CF(0) FY143_01765 PF01351 Ribonuclease HII FY143_01780 PF02913 FAD linked oxidases, C-terminal domain FY143_01780 PF01565 FAD binding domain FY143_01785 PF01300 Telomere recombination FY143_01785 PF03481 Putative GTP-binding controlling metal-binding FY143_01795 PF00355 Rieske [2Fe-2S] domain FY143_01795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY143_01800 PF00970 Oxidoreductase FAD-binding domain FY143_01800 PF00111 2Fe-2S iron-sulfur cluster binding domain FY143_01800 PF00175 Oxidoreductase NAD-binding domain FY143_01805 PF07886 BA14K-like protein FY143_01810 PF07886 BA14K-like protein FY143_01820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY143_01820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_01820 PF02770 Acyl-CoA dehydrogenase, middle domain FY143_01820 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY143_01835 PF05958 tRNA (Uracil-5-)-methyltransferase FY143_01840 PF01479 S4 domain FY143_01840 PF01728 FtsJ-like methyltransferase FY143_01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_01845 PF00672 HAMP domain FY143_01870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY143_01870 PF02779 Transketolase, pyrimidine binding domain FY143_01870 PF02780 Transketolase, C-terminal domain FY143_01875 PF05726 Pirin C-terminal cupin domain FY143_01875 PF02678 Pirin FY143_01880 PF02609 Exonuclease VII small subunit FY143_01885 PF00850 Histone deacetylase domain FY143_01890 PF02632 BioY family FY143_01895 PF02361 Cobalt transport protein FY143_01900 PF00005 ABC transporter FY143_01905 PF06224 Winged helix DNA-binding domain FY143_01910 PF00925 GTP cyclohydrolase II FY143_01910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY143_01915 PF01264 Chorismate synthase FY143_01930 PF00300 Histidine phosphatase superfamily (branch 1) FY143_01940 PF00226 DnaJ domain FY143_01940 PF01556 DnaJ C terminal domain FY143_01940 PF00684 DnaJ central domain FY143_01950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY143_01950 PF01243 Pyridoxamine 5'-phosphate oxidase FY143_01965 PF13419 Haloacid dehalogenase-like hydrolase FY143_01975 PF01523 Putative modulator of DNA gyrase FY143_01985 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY143_01985 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY143_01990 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY143_01995 PF01040 UbiA prenyltransferase family FY143_02000 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY143_02005 PF00510 Cytochrome c oxidase subunit III FY143_02015 PF02104 SURF1 family FY143_02020 PF02401 LytB protein FY143_02025 PF01636 Phosphotransferase enzyme family FY143_02030 PF00075 RNase H FY143_02040 PF00462 Glutaredoxin FY143_02040 PF08534 Redoxin FY143_02050 PF02622 Uncharacterized ACR, COG1678 FY143_02060 PF15887 Putative zinc-binding metallo-peptidase FY143_02060 PF10005 zinc-ribbon domain FY143_02065 PF00563 EAL domain FY143_02065 PF13185 GAF domain FY143_02065 PF00990 Diguanylate cyclase, GGDEF domain FY143_02070 PF13302 Acetyltransferase (GNAT) domain FY143_02075 PF00675 Insulinase (Peptidase family M16) FY143_02075 PF05193 Peptidase M16 inactive domain FY143_02080 PF00291 Pyridoxal-phosphate dependent enzyme FY143_02080 PF14821 Threonine synthase N terminus FY143_02090 PF13419 Haloacid dehalogenase-like hydrolase FY143_02110 PF01555 DNA methylase FY143_02110 PF18755 Restriction Enzyme Adenine Methylase Associated FY143_02120 PF14815 NUDIX domain FY143_02120 PF00730 HhH-GPD superfamily base excision DNA repair protein FY143_02130 PF13462 Thioredoxin FY143_02135 PF02463 RecF/RecN/SMC N terminal domain FY143_02140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_02145 PF02896 PEP-utilising enzyme, TIM barrel domain FY143_02145 PF00391 PEP-utilising enzyme, mobile domain FY143_02145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY143_02160 PF00375 Sodium:dicarboxylate symporter family FY143_02180 PF06039 Malate:quinone oxidoreductase (Mqo) FY143_02205 PF00009 Elongation factor Tu GTP binding domain FY143_02210 PF01507 Phosphoadenosine phosphosulfate reductase family FY143_02215 PF01507 Phosphoadenosine phosphosulfate reductase family FY143_02220 PF02082 Transcriptional regulator FY143_02230 PF00528 Binding-protein-dependent transport system inner membrane component FY143_02235 PF00528 Binding-protein-dependent transport system inner membrane component FY143_02240 PF00005 ABC transporter FY143_02240 PF12857 TOBE-like domain FY143_02245 PF02801 Beta-ketoacyl synthase, C-terminal domain FY143_02245 PF00109 Beta-ketoacyl synthase, N-terminal domain FY143_02245 PF08659 KR domain FY143_02245 PF00698 Acyl transferase domain FY143_02245 PF08240 Alcohol dehydrogenase GroES-like domain FY143_02245 PF00107 Zinc-binding dehydrogenase FY143_02245 PF00550 Phosphopantetheine attachment site FY143_02245 PF16197 Ketoacyl-synthetase C-terminal extension FY143_02245 PF14765 Polyketide synthase dehydratase FY143_02250 PF01590 GAF domain FY143_02250 PF00990 Diguanylate cyclase, GGDEF domain FY143_02250 PF00989 PAS fold FY143_02250 PF00563 EAL domain FY143_02260 PF13977 BetI-type transcriptional repressor, C-terminal FY143_02260 PF00440 Bacterial regulatory proteins, tetR family FY143_02265 PF00171 Aldehyde dehydrogenase family FY143_02270 PF05199 GMC oxidoreductase FY143_02270 PF00732 GMC oxidoreductase FY143_02285 PF00654 Voltage gated chloride channel FY143_02315 PF07690 Major Facilitator Superfamily FY143_02325 PF04675 DNA ligase N terminus FY143_02325 PF01068 ATP dependent DNA ligase domain FY143_02325 PF04679 ATP dependent DNA ligase C terminal region FY143_02335 PF00403 Heavy-metal-associated domain FY143_02340 PF17969 L,D-transpeptidase C-terminal domain FY143_02340 PF03734 L,D-transpeptidase catalytic domain FY143_02345 PF03734 L,D-transpeptidase catalytic domain FY143_02345 PF17969 L,D-transpeptidase C-terminal domain FY143_02360 PF01047 MarR family FY143_02365 PF02566 OsmC-like protein FY143_02380 PF00005 ABC transporter FY143_02380 PF16326 ABC transporter C-terminal domain FY143_02380 PF12848 ABC transporter FY143_02415 PF03466 LysR substrate binding domain FY143_02415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_02420 PF00106 short chain dehydrogenase FY143_02430 PF05872 Bacterial protein of unknown function (DUF853) FY143_02440 PF01638 HxlR-like helix-turn-helix FY143_02445 PF00106 short chain dehydrogenase FY143_02450 PF12833 Helix-turn-helix domain FY143_02455 PF01810 LysE type translocator FY143_02460 PF00248 Aldo/keto reductase family FY143_02465 PF13280 WYL domain FY143_02465 PF08279 HTH domain FY143_02480 PF01063 Amino-transferase class IV FY143_02485 PF00672 HAMP domain FY143_02485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_02490 PF03466 LysR substrate binding domain FY143_02505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY143_02505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY143_02520 PF01810 LysE type translocator FY143_02525 PF01322 Cytochrome C' FY143_02530 PF00034 Cytochrome c FY143_02560 PF00376 MerR family regulatory protein FY143_02560 PF09278 MerR, DNA binding FY143_02570 PF02583 Metal-sensitive transcriptional repressor FY143_02585 PF00571 CBS domain FY143_02585 PF00005 ABC transporter FY143_02590 PF00528 Binding-protein-dependent transport system inner membrane component FY143_02600 PF00326 Prolyl oligopeptidase family FY143_02600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY143_02615 PF00701 Dihydrodipicolinate synthetase family FY143_02625 PF02805 Metal binding domain of Ada FY143_02625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY143_02625 PF12833 Helix-turn-helix domain FY143_02625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY143_02630 PF01594 AI-2E family transporter FY143_02635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_02655 PF03006 Haemolysin-III related FY143_02665 PF01810 LysE type translocator FY143_02670 PF01641 SelR domain FY143_02675 PF13244 Domain of unknown function (DUF4040) FY143_02675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY143_02675 PF00361 Proton-conducting membrane transporter FY143_02680 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY143_02685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY143_02690 PF00361 Proton-conducting membrane transporter FY143_02695 PF01899 Na+/H+ ion antiporter subunit FY143_02700 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY143_02705 PF03334 Na+/H+ antiporter subunit FY143_02710 PF05443 ROS/MUCR transcriptional regulator protein FY143_02725 PF02657 Fe-S metabolism associated domain FY143_02730 PF17264 Family of unknown function (DUF5330) FY143_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_02735 PF00512 His Kinase A (phospho-acceptor) domain FY143_02770 PF01546 Peptidase family M20/M25/M40 FY143_02770 PF07687 Peptidase dimerisation domain FY143_02775 PF01810 LysE type translocator FY143_02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_02780 PF03466 LysR substrate binding domain FY143_02785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_02790 PF00912 Transglycosylase FY143_02790 PF00905 Penicillin binding protein transpeptidase domain FY143_02795 PF03692 Putative zinc- or iron-chelating domain FY143_02800 PF00905 Penicillin binding protein transpeptidase domain FY143_02810 PF00376 MerR family regulatory protein FY143_02810 PF09278 MerR, DNA binding FY143_02825 PF08244 Glycosyl hydrolases family 32 C terminal FY143_02825 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY143_02830 PF07536 HWE histidine kinase FY143_02830 PF13426 PAS domain FY143_02830 PF08447 PAS fold FY143_02835 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY143_02845 PF13404 AsnC-type helix-turn-helix domain FY143_02845 PF01037 Lrp/AsnC ligand binding domain FY143_02885 PF04860 Phage portal protein FY143_02975 PF00486 Transcriptional regulatory protein, C terminal FY143_02975 PF00072 Response regulator receiver domain FY143_02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_02995 PF03100 CcmE FY143_03000 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY143_03000 PF01578 Cytochrome C assembly protein FY143_03005 PF03918 Cytochrome C biogenesis protein FY143_03010 PF13180 PDZ domain FY143_03015 PF00072 Response regulator receiver domain FY143_03015 PF00486 Transcriptional regulatory protein, C terminal FY143_03020 PF00512 His Kinase A (phospho-acceptor) domain FY143_03020 PF08448 PAS fold FY143_03020 PF13426 PAS domain FY143_03020 PF00072 Response regulator receiver domain FY143_03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_03025 PF04134 Protein of unknown function, DUF393 FY143_03035 PF08335 GlnD PII-uridylyltransferase FY143_03035 PF03710 Glutamate-ammonia ligase adenylyltransferase FY143_03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_03040 PF00512 His Kinase A (phospho-acceptor) domain FY143_03040 PF00989 PAS fold FY143_03050 PF01433 Peptidase family M1 domain FY143_03050 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY143_03050 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY143_03070 PF00012 Hsp70 protein FY143_03075 PF00990 Diguanylate cyclase, GGDEF domain FY143_03105 PF08240 Alcohol dehydrogenase GroES-like domain FY143_03105 PF00107 Zinc-binding dehydrogenase FY143_03110 PF01638 HxlR-like helix-turn-helix FY143_03115 PF02673 Bacitracin resistance protein BacA FY143_03120 PF00571 CBS domain FY143_03120 PF01769 Divalent cation transporter FY143_03120 PF03448 MgtE intracellular N domain FY143_03125 PF07690 Major Facilitator Superfamily FY143_03130 PF00781 Diacylglycerol kinase catalytic domain FY143_03135 PF00202 Aminotransferase class-III FY143_03145 PF01048 Phosphorylase superfamily FY143_03145 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY143_03170 PF00155 Aminotransferase class I and II FY143_03180 PF14759 Reductase C-terminal FY143_03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_03185 PF03328 HpcH/HpaI aldolase/citrate lyase family FY143_03240 PF03354 Phage Terminase FY143_03265 PF00589 Phage integrase family FY143_03270 PF02530 Porin subfamily FY143_03275 PF02530 Porin subfamily FY143_03280 PF01464 Transglycosylase SLT domain FY143_03280 PF14718 Soluble lytic murein transglycosylase L domain FY143_03285 PF00701 Dihydrodipicolinate synthetase family FY143_03290 PF01668 SmpB protein FY143_03295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_03295 PF00672 HAMP domain FY143_03305 PF01192 RNA polymerase Rpb6 FY143_03310 PF02824 TGS domain FY143_03310 PF13291 ACT domain FY143_03310 PF04607 Region found in RelA / SpoT proteins FY143_03325 PF01648 4'-phosphopantetheinyl transferase superfamily FY143_03330 PF10502 Signal peptidase, peptidase S26 FY143_03335 PF14622 Ribonuclease-III-like FY143_03335 PF00035 Double-stranded RNA binding motif FY143_03340 PF07650 KH domain FY143_03340 PF01926 50S ribosome-binding GTPase FY143_03345 PF00027 Cyclic nucleotide-binding domain FY143_03345 PF13545 Crp-like helix-turn-helix domain FY143_03350 PF00072 Response regulator receiver domain FY143_03355 PF02565 Recombination protein O C terminal FY143_03355 PF11967 Recombination protein O N terminal FY143_03360 PF07690 Major Facilitator Superfamily FY143_03365 PF08241 Methyltransferase domain FY143_03375 PF01966 HD domain FY143_03385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_03395 PF00005 ABC transporter FY143_03400 PF00528 Binding-protein-dependent transport system inner membrane component FY143_03405 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY143_03410 PF00924 Mechanosensitive ion channel FY143_03410 PF05552 Conserved TM helix FY143_03420 PF01966 HD domain FY143_03450 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY143_03460 PF00990 Diguanylate cyclase, GGDEF domain FY143_03460 PF00072 Response regulator receiver domain FY143_03465 PF01066 CDP-alcohol phosphatidyltransferase FY143_03470 PF02666 Phosphatidylserine decarboxylase FY143_03475 PF00664 ABC transporter transmembrane region FY143_03475 PF00005 ABC transporter FY143_03485 PF03641 Possible lysine decarboxylase FY143_03490 PF03717 Penicillin-binding Protein dimerisation domain FY143_03490 PF00905 Penicillin binding protein transpeptidase domain FY143_03495 PF00892 EamA-like transporter family FY143_03500 PF00561 alpha/beta hydrolase fold FY143_03520 PF04480 Protein of unknown function (DUF559) FY143_03525 PF09190 DALR domain FY143_03525 PF01406 tRNA synthetases class I (C) catalytic domain FY143_03530 PF00106 short chain dehydrogenase FY143_03535 PF13537 Glutamine amidotransferase domain FY143_03535 PF00156 Phosphoribosyl transferase domain FY143_03540 PF02674 Colicin V production protein FY143_03545 PF06745 KaiC FY143_03545 PF18073 Rubredoxin metal binding domain FY143_03555 PF00842 Alanine racemase, C-terminal domain FY143_03555 PF01168 Alanine racemase, N-terminal domain FY143_03560 PF12852 Cupin FY143_03560 PF12833 Helix-turn-helix domain FY143_03565 PF03591 AzlC protein FY143_03575 PF03796 DnaB-like helicase C terminal domain FY143_03575 PF00772 DnaB-like helicase N terminal domain FY143_03585 PF01047 MarR family FY143_03595 PF13533 Biotin-lipoyl like FY143_03600 PF01281 Ribosomal protein L9, N-terminal domain FY143_03600 PF03948 Ribosomal protein L9, C-terminal domain FY143_03610 PF01084 Ribosomal protein S18 FY143_03615 PF01250 Ribosomal protein S6 FY143_03620 PF00248 Aldo/keto reductase family FY143_03625 PF00698 Acyl transferase domain FY143_03635 PF00550 Phosphopantetheine attachment site FY143_03640 PF00109 Beta-ketoacyl synthase, N-terminal domain FY143_03640 PF02801 Beta-ketoacyl synthase, C-terminal domain FY143_03645 PF02618 YceG-like family FY143_03650 PF08340 Domain of unknown function (DUF1732) FY143_03650 PF03755 YicC-like family, N-terminal region FY143_03655 PF00625 Guanylate kinase FY143_03665 PF00398 Ribosomal RNA adenine dimethylase FY143_03670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY143_03680 PF04453 LPS transport system D FY143_03680 PF03968 OstA-like protein FY143_03695 PF02789 Cytosol aminopeptidase family, N-terminal domain FY143_03695 PF00883 Cytosol aminopeptidase family, catalytic domain FY143_03705 PF00563 EAL domain FY143_03705 PF00990 Diguanylate cyclase, GGDEF domain FY143_03705 PF03707 Bacterial signalling protein N terminal repeat FY143_03710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_03715 PF13185 GAF domain FY143_03715 PF00990 Diguanylate cyclase, GGDEF domain FY143_03715 PF00563 EAL domain FY143_03720 PF12848 ABC transporter FY143_03720 PF00005 ABC transporter FY143_03725 PF17158 Membrane-associated sensor, integral membrane domain FY143_03725 PF00990 Diguanylate cyclase, GGDEF domain FY143_03730 PF13417 Glutathione S-transferase, N-terminal domain FY143_03735 PF00334 Nucleoside diphosphate kinase FY143_03755 PF02391 MoaE protein FY143_03765 PF01066 CDP-alcohol phosphatidyltransferase FY143_03770 PF01541 GIY-YIG catalytic domain FY143_03770 PF02151 UvrB/uvrC motif FY143_03770 PF08459 UvrC Helix-hairpin-helix N-terminal FY143_03780 PF13505 Outer membrane protein beta-barrel domain FY143_03785 PF13417 Glutathione S-transferase, N-terminal domain FY143_03785 PF00043 Glutathione S-transferase, C-terminal domain FY143_03790 PF00445 Ribonuclease T2 family FY143_03800 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY143_03805 PF01568 Molydopterin dinucleotide binding domain FY143_03805 PF00384 Molybdopterin oxidoreductase FY143_03805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY143_03810 PF00293 NUDIX domain FY143_03820 PF00551 Formyl transferase FY143_03825 PF00586 AIR synthase related protein, N-terminal domain FY143_03825 PF02769 AIR synthase related protein, C-terminal domain FY143_03830 PF01594 AI-2E family transporter FY143_03840 PF17941 Polyphosphate kinase C-terminal domain 1 FY143_03840 PF13090 Polyphosphate kinase C-terminal domain 2 FY143_03840 PF13089 Polyphosphate kinase N-terminal domain FY143_03840 PF02503 Polyphosphate kinase middle domain FY143_03845 PF02541 Ppx/GppA phosphatase family FY143_03850 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_03870 PF00211 Adenylate and Guanylate cyclase catalytic domain FY143_03880 PF00570 HRDC domain FY143_03880 PF01612 3'-5' exonuclease FY143_03885 PF07690 Major Facilitator Superfamily FY143_03890 PF00152 tRNA synthetases class II (D, K and N) FY143_03890 PF02938 GAD domain FY143_03890 PF01336 OB-fold nucleic acid binding domain FY143_03895 PF06123 Inner membrane protein CreD FY143_03900 PF01740 STAS domain FY143_03900 PF00916 Sulfate permease family FY143_03910 PF03989 DNA gyrase C-terminal domain, beta-propeller FY143_03910 PF00521 DNA gyrase/topoisomerase IV, subunit A FY143_03920 PF04377 Arginine-tRNA-protein transferase, C terminus FY143_03920 PF04376 Arginine-tRNA-protein transferase, N terminus FY143_03930 PF00490 Delta-aminolevulinic acid dehydratase FY143_03950 PF00464 Serine hydroxymethyltransferase FY143_03955 PF03477 ATP cone domain FY143_03960 PF01872 RibD C-terminal domain FY143_03960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY143_03965 PF00677 Lumazine binding domain FY143_03970 PF01810 LysE type translocator FY143_03975 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY143_03980 PF01029 NusB family FY143_03985 PF07690 Major Facilitator Superfamily FY143_03990 PF03030 Inorganic H+ pyrophosphatase FY143_04010 PF02504 Fatty acid synthesis protein FY143_04015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY143_04015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY143_04020 PF00216 Bacterial DNA-binding protein FY143_04025 PF13411 MerR HTH family regulatory protein FY143_04040 PF00403 Heavy-metal-associated domain FY143_04045 PF00970 Oxidoreductase FAD-binding domain FY143_04045 PF00111 2Fe-2S iron-sulfur cluster binding domain FY143_04045 PF00175 Oxidoreductase NAD-binding domain FY143_04050 PF00376 MerR family regulatory protein FY143_04050 PF09278 MerR, DNA binding FY143_04055 PF00528 Binding-protein-dependent transport system inner membrane component FY143_04060 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_04060 PF00528 Binding-protein-dependent transport system inner membrane component FY143_04065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_04065 PF00005 ABC transporter FY143_04070 PF00005 ABC transporter FY143_04070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_04075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_04085 PF02386 Cation transport protein FY143_04090 PF00291 Pyridoxal-phosphate dependent enzyme FY143_04090 PF00585 C-terminal regulatory domain of Threonine dehydratase FY143_04100 PF00990 Diguanylate cyclase, GGDEF domain FY143_04100 PF00072 Response regulator receiver domain FY143_04105 PF02525 Flavodoxin-like fold FY143_04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_04110 PF03466 LysR substrate binding domain FY143_04120 PF02872 5'-nucleotidase, C-terminal domain FY143_04120 PF00149 Calcineurin-like phosphoesterase FY143_04145 PF00581 Rhodanese-like domain FY143_04150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY143_04150 PF02272 DHHA1 domain FY143_04150 PF01411 tRNA synthetases class II (A) FY143_04155 PF00571 CBS domain FY143_04155 PF00291 Pyridoxal-phosphate dependent enzyme FY143_04160 PF03441 FAD binding domain of DNA photolyase FY143_04160 PF00875 DNA photolyase FY143_04170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY143_04170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY143_04200 PF06055 Exopolysaccharide synthesis, ExoD FY143_04205 PF09335 SNARE associated Golgi protein FY143_04220 PF01032 FecCD transport family FY143_04225 PF00005 ABC transporter FY143_04230 PF00127 Copper binding proteins, plastocyanin/azurin family FY143_04235 PF00210 Ferritin-like domain FY143_04270 PF02397 Bacterial sugar transferase FY143_04275 PF00534 Glycosyl transferases group 1 FY143_04300 PF02628 Cytochrome oxidase assembly protein FY143_04305 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY143_04310 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY143_04315 PF00491 Arginase family FY143_04320 PF00380 Ribosomal protein S9/S16 FY143_04325 PF00572 Ribosomal protein L13 FY143_04340 PF13380 CoA binding domain FY143_04345 PF01053 Cys/Met metabolism PLP-dependent enzyme FY143_04355 PF00067 Cytochrome P450 FY143_04360 PF00990 Diguanylate cyclase, GGDEF domain FY143_04365 PF00574 Clp protease FY143_04370 PF06689 ClpX C4-type zinc finger FY143_04370 PF10431 C-terminal, D2-small domain, of ClpB protein FY143_04370 PF07724 AAA domain (Cdc48 subfamily) FY143_04375 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY143_04375 PF05362 Lon protease (S16) C-terminal proteolytic domain FY143_04375 PF00004 ATPase family associated with various cellular activities (AAA) FY143_04380 PF00216 Bacterial DNA-binding protein FY143_04410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY143_04415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY143_04420 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY143_04430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY143_04445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY143_04445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY143_04445 PF10531 SLBB domain FY143_04450 PF00384 Molybdopterin oxidoreductase FY143_04450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY143_04450 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY143_04455 PF00146 NADH dehydrogenase FY143_04460 PF12838 4Fe-4S dicluster domain FY143_04465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY143_04470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY143_04475 PF00361 Proton-conducting membrane transporter FY143_04475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY143_04480 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY143_04480 PF00361 Proton-conducting membrane transporter FY143_04485 PF00361 Proton-conducting membrane transporter FY143_04490 PF02237 Biotin protein ligase C terminal domain FY143_04490 PF03099 Biotin/lipoate A/B protein ligase family FY143_04490 PF08279 HTH domain FY143_04495 PF12706 Beta-lactamase superfamily domain FY143_04495 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY143_04495 PF17770 Ribonuclease J C-terminal domain FY143_04505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY143_04505 PF03129 Anticodon binding domain FY143_04510 PF02687 FtsX-like permease family FY143_04510 PF12704 MacB-like periplasmic core domain FY143_04515 PF00005 ABC transporter FY143_04520 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY143_04520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY143_04520 PF14579 Helix-hairpin-helix motif FY143_04520 PF02811 PHP domain FY143_04530 PF00817 impB/mucB/samB family FY143_04530 PF11799 impB/mucB/samB family C-terminal domain FY143_04540 PF00072 Response regulator receiver domain FY143_04545 PF00990 Diguanylate cyclase, GGDEF domain FY143_04545 PF00072 Response regulator receiver domain FY143_04550 PF00471 Ribosomal protein L33 FY143_04555 PF07690 Major Facilitator Superfamily FY143_04570 PF00575 S1 RNA binding domain FY143_04570 PF00773 RNB domain FY143_04570 PF08461 Ribonuclease R winged-helix domain FY143_04570 PF17876 Cold shock domain FY143_04570 PF08206 Ribonuclease B OB domain FY143_04575 PF01131 DNA topoisomerase FY143_04575 PF01751 Toprim domain FY143_04575 PF13368 Topoisomerase C-terminal repeat FY143_04575 PF01396 Topoisomerase DNA binding C4 zinc finger FY143_04590 PF02660 Glycerol-3-phosphate acyltransferase FY143_04595 PF01979 Amidohydrolase family FY143_04600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY143_04600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY143_04605 PF02770 Acyl-CoA dehydrogenase, middle domain FY143_04605 PF18158 Adaptive response protein AidB N-terminal domain FY143_04605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY143_04610 PF00583 Acetyltransferase (GNAT) family FY143_04630 PF03652 Holliday junction resolvase FY143_04635 PF08274 PhnA Zinc-Ribbon FY143_04635 PF03831 PhnA domain FY143_04645 PF02686 Glu-tRNAGln amidotransferase C subunit FY143_04650 PF01425 Amidase FY143_04655 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY143_04660 PF00583 Acetyltransferase (GNAT) family FY143_04670 PF02934 GatB/GatE catalytic domain FY143_04670 PF02637 GatB domain FY143_04680 PF00583 Acetyltransferase (GNAT) family FY143_04695 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY143_04700 PF02785 Biotin carboxylase C-terminal domain FY143_04700 PF00289 Biotin carboxylase, N-terminal domain FY143_04700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_04705 PF00364 Biotin-requiring enzyme FY143_04710 PF01220 Dehydroquinase class II FY143_04715 PF06965 Na+/H+ antiporter 1 FY143_04715 PF13462 Thioredoxin FY143_04720 PF00155 Aminotransferase class I and II FY143_04745 PF12111 Polyribonucleotide phosphorylase C terminal FY143_04745 PF10150 Ribonuclease E/G family FY143_04745 PF00575 S1 RNA binding domain FY143_04750 PF01520 N-acetylmuramoyl-L-alanine amidase FY143_04755 PF17092 Penicillin-binding protein OB-like domain FY143_04755 PF00912 Transglycosylase FY143_04755 PF00905 Penicillin binding protein transpeptidase domain FY143_04775 PF01513 ATP-NAD kinase FY143_04780 PF02567 Phenazine biosynthesis-like protein FY143_04795 PF00111 2Fe-2S iron-sulfur cluster binding domain FY143_04805 PF00809 Pterin binding enzyme FY143_04810 PF02152 Dihydroneopterin aldolase FY143_04815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY143_04825 PF05128 Domain of unknown function (DUF697) FY143_04830 PF04317 YcjX-like family, DUF463 FY143_04840 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY143_04855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_04855 PF00512 His Kinase A (phospho-acceptor) domain FY143_04855 PF08448 PAS fold FY143_04855 PF13188 PAS domain FY143_04855 PF00072 Response regulator receiver domain FY143_04860 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY143_04865 PF02861 Clp amino terminal domain, pathogenicity island component FY143_04865 PF17871 AAA lid domain FY143_04865 PF10431 C-terminal, D2-small domain, of ClpB protein FY143_04865 PF00004 ATPase family associated with various cellular activities (AAA) FY143_04865 PF07724 AAA domain (Cdc48 subfamily) FY143_04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_04885 PF03466 LysR substrate binding domain FY143_04895 PF01230 HIT domain FY143_04920 PF00318 Ribosomal protein S2 FY143_04925 PF00889 Elongation factor TS FY143_04930 PF00696 Amino acid kinase family FY143_04935 PF01765 Ribosome recycling factor FY143_04940 PF01255 Putative undecaprenyl diphosphate synthase FY143_04950 PF17820 PDZ domain FY143_04950 PF02163 Peptidase family M50 FY143_04955 PF07244 Surface antigen variable number repeat FY143_04955 PF01103 Surface antigen FY143_04960 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY143_04960 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_04965 PF07977 FabA-like domain FY143_04970 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY143_04970 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_04975 PF06230 LpxI C-terminal domain FY143_04975 PF17930 LpxI N-terminal domain FY143_04980 PF02684 Lipid-A-disaccharide synthetase FY143_04985 PF00285 Citrate synthase, C-terminal domain FY143_05000 PF01726 LexA DNA binding domain FY143_05000 PF00717 Peptidase S24-like FY143_05010 PF00793 DAHP synthetase I family FY143_05015 PF00113 Enolase, C-terminal TIM barrel domain FY143_05015 PF03952 Enolase, N-terminal domain FY143_05025 PF00676 Dehydrogenase E1 component FY143_05030 PF00364 Biotin-requiring enzyme FY143_05030 PF02779 Transketolase, pyrimidine binding domain FY143_05030 PF02780 Transketolase, C-terminal domain FY143_05035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY143_05035 PF00364 Biotin-requiring enzyme FY143_05035 PF02817 e3 binding domain FY143_05045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY143_05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_05055 PF04055 Radical SAM superfamily FY143_05055 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY143_05060 PF00892 EamA-like transporter family FY143_05075 PF03364 Polyketide cyclase / dehydrase and lipid transport FY143_05080 PF02464 Competence-damaged protein FY143_05085 PF02542 YgbB family FY143_05085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY143_05090 PF01207 Dihydrouridine synthase (Dus) FY143_05095 PF00512 His Kinase A (phospho-acceptor) domain FY143_05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_05095 PF00989 PAS fold FY143_05100 PF02954 Bacterial regulatory protein, Fis family FY143_05100 PF00072 Response regulator receiver domain FY143_05100 PF00158 Sigma-54 interaction domain FY143_05105 PF00672 HAMP domain FY143_05105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_05105 PF00989 PAS fold FY143_05105 PF00512 His Kinase A (phospho-acceptor) domain FY143_05110 PF00072 Response regulator receiver domain FY143_05110 PF02954 Bacterial regulatory protein, Fis family FY143_05110 PF00158 Sigma-54 interaction domain FY143_05115 PF02254 TrkA-N domain FY143_05115 PF02080 TrkA-C domain FY143_05120 PF17209 Hfq protein FY143_05125 PF16360 GTP-binding GTPase Middle Region FY143_05125 PF13167 GTP-binding GTPase N-terminal FY143_05125 PF01926 50S ribosome-binding GTPase FY143_05130 PF03819 MazG nucleotide pyrophosphohydrolase domain FY143_05140 PF10414 Sirohaem synthase dimerisation region FY143_05140 PF14824 Sirohaem biosynthesis protein central FY143_05140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_05160 PF00970 Oxidoreductase FAD-binding domain FY143_05160 PF00175 Oxidoreductase NAD-binding domain FY143_05165 PF07690 Major Facilitator Superfamily FY143_05180 PF02347 Glycine cleavage system P-protein FY143_05185 PF01597 Glycine cleavage H-protein FY143_05190 PF01571 Aminomethyltransferase folate-binding domain FY143_05190 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY143_05220 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY143_05225 PF00849 RNA pseudouridylate synthase FY143_05225 PF01479 S4 domain FY143_05230 PF13419 Haloacid dehalogenase-like hydrolase FY143_05250 PF00756 Putative esterase FY143_05260 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY143_05270 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY143_05270 PF00578 AhpC/TSA family FY143_05275 PF00043 Glutathione S-transferase, C-terminal domain FY143_05275 PF02798 Glutathione S-transferase, N-terminal domain FY143_05295 PF04542 Sigma-70 region 2 FY143_05295 PF08281 Sigma-70, region 4 FY143_05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_05325 PF03466 LysR substrate binding domain FY143_05330 PF04303 PrpF protein FY143_05340 PF00005 ABC transporter FY143_05345 PF00528 Binding-protein-dependent transport system inner membrane component FY143_05350 PF00072 Response regulator receiver domain FY143_05350 PF13426 PAS domain FY143_05350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_05355 PF00072 Response regulator receiver domain FY143_05360 PF08447 PAS fold FY143_05360 PF07536 HWE histidine kinase FY143_05360 PF13426 PAS domain FY143_05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_05365 PF13426 PAS domain FY143_05365 PF00072 Response regulator receiver domain FY143_05375 PF00034 Cytochrome c FY143_05385 PF05199 GMC oxidoreductase FY143_05385 PF00732 GMC oxidoreductase FY143_05395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_05395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_05405 PF00356 Bacterial regulatory proteins, lacI family FY143_05410 PF02653 Branched-chain amino acid transport system / permease component FY143_05415 PF02653 Branched-chain amino acid transport system / permease component FY143_05420 PF00005 ABC transporter FY143_05425 PF13407 Periplasmic binding protein domain FY143_05430 PF00075 RNase H FY143_05440 PF13649 Methyltransferase domain FY143_05445 PF00654 Voltage gated chloride channel FY143_05450 PF12706 Beta-lactamase superfamily domain FY143_05450 PF03099 Biotin/lipoate A/B protein ligase family FY143_05455 PF01026 TatD related DNase FY143_05460 PF09334 tRNA synthetases class I (M) FY143_05460 PF08264 Anticodon-binding domain of tRNA FY143_05465 PF09115 DNA polymerase III, delta subunit, C terminal FY143_05470 PF02223 Thymidylate kinase FY143_05475 PF07943 Penicillin-binding protein 5, C-terminal domain FY143_05475 PF00768 D-alanyl-D-alanine carboxypeptidase FY143_05480 PF03330 Lytic transglycolase FY143_05480 PF05036 Sporulation related domain FY143_05495 PF01757 Acyltransferase family FY143_05505 PF01757 Acyltransferase family FY143_05555 PF03989 DNA gyrase C-terminal domain, beta-propeller FY143_05555 PF00521 DNA gyrase/topoisomerase IV, subunit A FY143_05560 PF01914 MarC family integral membrane protein FY143_05565 PF00571 CBS domain FY143_05565 PF01368 DHH family FY143_05565 PF02272 DHHA1 domain FY143_05565 PF01743 Poly A polymerase head domain FY143_05570 PF00436 Single-strand binding protein family FY143_05575 PF17755 UvrA DNA-binding domain FY143_05575 PF17760 UvrA interaction domain FY143_05585 PF01207 Dihydrouridine synthase (Dus) FY143_05595 PF05974 Domain of unknown function (DUF892) FY143_05600 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY143_05605 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_05615 PF00950 ABC 3 transport family FY143_05620 PF00005 ABC transporter FY143_05625 PF01297 Zinc-uptake complex component A periplasmic FY143_05640 PF00248 Aldo/keto reductase family FY143_05650 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY143_05650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY143_05655 PF03597 Cytochrome oxidase maturation protein cbb3-type FY143_05665 PF05751 FixH FY143_05670 PF13746 4Fe-4S dicluster domain FY143_05670 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY143_05670 PF12801 4Fe-4S binding domain FY143_05685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY143_05685 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY143_05700 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY143_05705 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY143_05720 PF00376 MerR family regulatory protein FY143_05720 PF09278 MerR, DNA binding FY143_05725 PF00571 CBS domain FY143_05725 PF03448 MgtE intracellular N domain FY143_05725 PF01769 Divalent cation transporter FY143_05730 PF00384 Molybdopterin oxidoreductase FY143_05740 PF01327 Polypeptide deformylase FY143_05760 PF03099 Biotin/lipoate A/B protein ligase family FY143_05765 PF08240 Alcohol dehydrogenase GroES-like domain FY143_05765 PF00107 Zinc-binding dehydrogenase FY143_05790 PF07549 SecD/SecF GG Motif FY143_05790 PF02355 Protein export membrane protein FY143_05795 PF02699 Preprotein translocase subunit FY143_05805 PF08240 Alcohol dehydrogenase GroES-like domain FY143_05805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY143_05815 PF00067 Cytochrome P450 FY143_05825 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_05825 PF06426 Serine acetyltransferase, N-terminal FY143_05830 PF00561 alpha/beta hydrolase fold FY143_05840 PF01494 FAD binding domain FY143_05845 PF01053 Cys/Met metabolism PLP-dependent enzyme FY143_05850 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_05855 PF00528 Binding-protein-dependent transport system inner membrane component FY143_05860 PF00528 Binding-protein-dependent transport system inner membrane component FY143_05865 PF00005 ABC transporter FY143_05880 PF01368 DHH family FY143_05880 PF02272 DHHA1 domain FY143_05880 PF17768 RecJ OB domain FY143_05890 PF01842 ACT domain FY143_05890 PF00742 Homoserine dehydrogenase FY143_05890 PF03447 Homoserine dehydrogenase, NAD binding domain FY143_05895 PF00155 Aminotransferase class I and II FY143_05900 PF01156 Inosine-uridine preferring nucleoside hydrolase FY143_05905 PF01925 Sulfite exporter TauE/SafE FY143_05920 PF00107 Zinc-binding dehydrogenase FY143_05920 PF08240 Alcohol dehydrogenase GroES-like domain FY143_05925 PF00109 Beta-ketoacyl synthase, N-terminal domain FY143_05925 PF02801 Beta-ketoacyl synthase, C-terminal domain FY143_05940 PF07977 FabA-like domain FY143_05945 PF00550 Phosphopantetheine attachment site FY143_05950 PF04055 Radical SAM superfamily FY143_05955 PF00027 Cyclic nucleotide-binding domain FY143_05955 PF13545 Crp-like helix-turn-helix domain FY143_05965 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY143_05970 PF17746 SfsA N-terminal OB domain FY143_05970 PF03749 Sugar fermentation stimulation protein RE domain FY143_05975 PF00557 Metallopeptidase family M24 FY143_05980 PF04002 RadC-like JAB domain FY143_05995 PF01474 Class-II DAHP synthetase family FY143_06000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY143_06000 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_06010 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY143_06015 PF13419 Haloacid dehalogenase-like hydrolase FY143_06030 PF10415 Fumarase C C-terminus FY143_06030 PF00206 Lyase FY143_06040 PF06418 CTP synthase N-terminus FY143_06040 PF00117 Glutamine amidotransferase class-I FY143_06045 PF03840 Preprotein translocase SecG subunit FY143_06050 PF00121 Triosephosphate isomerase FY143_06060 PF00204 DNA gyrase B FY143_06060 PF00986 DNA gyrase B subunit, carboxyl terminus FY143_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_06060 PF01751 Toprim domain FY143_06065 PF00574 Clp protease FY143_06075 PF01022 Bacterial regulatory protein, arsR family FY143_06080 PF13091 PLD-like domain FY143_06085 PF00072 Response regulator receiver domain FY143_06090 PF01266 FAD dependent oxidoreductase FY143_06090 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY143_06090 PF01571 Aminomethyltransferase folate-binding domain FY143_06090 PF16350 FAD dependent oxidoreductase central domain FY143_06100 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY143_06100 PF12795 Mechanosensitive ion channel porin domain FY143_06100 PF00924 Mechanosensitive ion channel FY143_06165 PF00005 ABC transporter FY143_06170 PF02405 Permease MlaE FY143_06175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_06175 PF13378 Enolase C-terminal domain-like FY143_06185 PF03949 Malic enzyme, NAD binding domain FY143_06185 PF00390 Malic enzyme, N-terminal domain FY143_06185 PF01515 Phosphate acetyl/butaryl transferase FY143_06195 PF00881 Nitroreductase family FY143_06200 PF07676 WD40-like Beta Propeller Repeat FY143_06210 PF02540 NAD synthase FY143_06210 PF00795 Carbon-nitrogen hydrolase FY143_06215 PF00884 Sulfatase FY143_06225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY143_06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_06245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY143_06245 PF05698 Bacterial trigger factor protein (TF) C-terminus FY143_06245 PF05697 Bacterial trigger factor protein (TF) FY143_06265 PF01134 Glucose inhibited division protein A FY143_06285 PF08240 Alcohol dehydrogenase GroES-like domain FY143_06285 PF00107 Zinc-binding dehydrogenase FY143_06295 PF00550 Phosphopantetheine attachment site FY143_06300 PF00975 Thioesterase domain FY143_06300 PF00550 Phosphopantetheine attachment site FY143_06300 PF00668 Condensation domain FY143_06300 PF13193 AMP-binding enzyme C-terminal domain FY143_06300 PF00501 AMP-binding enzyme FY143_06310 PF04715 Anthranilate synthase component I, N terminal region FY143_06310 PF00117 Glutamine amidotransferase class-I FY143_06310 PF00425 chorismate binding enzyme FY143_06315 PF01702 Queuine tRNA-ribosyltransferase FY143_06320 PF02547 Queuosine biosynthesis protein FY143_06325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY143_06330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY143_06335 PF01467 Cytidylyltransferase-like FY143_06350 PF00591 Glycosyl transferase family, a/b domain FY143_06350 PF02885 Glycosyl transferase family, helical bundle domain FY143_06355 PF00218 Indole-3-glycerol phosphate synthase FY143_06360 PF01967 MoaC family FY143_06365 PF03454 MoeA C-terminal region (domain IV) FY143_06365 PF00994 Probable molybdopterin binding domain FY143_06365 PF03453 MoeA N-terminal region (domain I and II) FY143_06370 PF17158 Membrane-associated sensor, integral membrane domain FY143_06370 PF00990 Diguanylate cyclase, GGDEF domain FY143_06380 PF00999 Sodium/hydrogen exchanger family FY143_06380 PF02254 TrkA-N domain FY143_06390 PF04055 Radical SAM superfamily FY143_06390 PF06463 Molybdenum Cofactor Synthesis C FY143_06395 PF00892 EamA-like transporter family FY143_06400 PF07690 Major Facilitator Superfamily FY143_06405 PF12804 MobA-like NTP transferase domain FY143_06410 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY143_06415 PF01551 Peptidase family M23 FY143_06425 PF01975 Survival protein SurE FY143_06430 PF02403 Seryl-tRNA synthetase N-terminal domain FY143_06430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY143_06435 PF00902 Sec-independent protein translocase protein (TatC) FY143_06440 PF02416 mttA/Hcf106 family FY143_06445 PF02416 mttA/Hcf106 family FY143_06450 PF04079 Segregation and condensation complex subunit ScpB FY143_06455 PF02616 Segregation and condensation protein ScpA FY143_06460 PF00933 Glycosyl hydrolase family 3 N terminal domain FY143_06470 PF03485 Arginyl tRNA synthetase N terminal domain FY143_06470 PF05746 DALR anticodon binding domain FY143_06470 PF00750 tRNA synthetases class I (R) FY143_06475 PF01966 HD domain FY143_06475 PF13286 Phosphohydrolase-associated domain FY143_06480 PF01521 Iron-sulphur cluster biosynthesis FY143_06490 PF08238 Sel1 repeat FY143_06505 PF00133 tRNA synthetases class I (I, L, M and V) FY143_06505 PF08264 Anticodon-binding domain of tRNA FY143_06505 PF10458 Valyl tRNA synthetase tRNA binding arm FY143_06540 PF03358 NADPH-dependent FMN reductase FY143_06545 PF02464 Competence-damaged protein FY143_06545 PF18146 Damage-inducible protein CinA KH domain FY143_06545 PF00994 Probable molybdopterin binding domain FY143_06550 PF00582 Universal stress protein family FY143_06555 PF00156 Phosphoribosyl transferase domain FY143_06565 PF02867 Ribonucleotide reductase, barrel domain FY143_06565 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY143_06580 PF01566 Natural resistance-associated macrophage protein FY143_06590 PF00005 ABC transporter FY143_06590 PF00664 ABC transporter transmembrane region FY143_06595 PF01594 AI-2E family transporter FY143_06600 PF00583 Acetyltransferase (GNAT) family FY143_06630 PF03129 Anticodon binding domain FY143_06630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY143_06630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY143_06630 PF02824 TGS domain FY143_06640 PF01809 Putative membrane protein insertion efficiency factor FY143_06650 PF01227 GTP cyclohydrolase I FY143_06655 PF01502 Phosphoribosyl-AMP cyclohydrolase FY143_06660 PF01734 Patatin-like phospholipase FY143_06665 PF00478 IMP dehydrogenase / GMP reductase domain FY143_06665 PF00571 CBS domain FY143_06695 PF03315 Serine dehydratase beta chain FY143_06695 PF03313 Serine dehydratase alpha chain FY143_06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_06730 PF03466 LysR substrate binding domain FY143_06740 PF01965 DJ-1/PfpI family FY143_06740 PF12833 Helix-turn-helix domain FY143_06745 PF03853 YjeF-related protein N-terminus FY143_06745 PF01256 Carbohydrate kinase FY143_06750 PF00543 Nitrogen regulatory protein P-II FY143_06755 PF00120 Glutamine synthetase, catalytic domain FY143_06755 PF03951 Glutamine synthetase, beta-Grasp domain FY143_06765 PF08755 Hemimethylated DNA-binding protein YccV like FY143_06775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_06785 PF00892 EamA-like transporter family FY143_06795 PF02559 CarD-like/TRCF domain FY143_06795 PF00270 DEAD/DEAH box helicase FY143_06795 PF00271 Helicase conserved C-terminal domain FY143_06795 PF03461 TRCF domain FY143_06795 PF17757 UvrB interaction domain FY143_06805 PF00271 Helicase conserved C-terminal domain FY143_06805 PF17191 RecG wedge domain FY143_06805 PF00270 DEAD/DEAH box helicase FY143_06820 PF01850 PIN domain FY143_06835 PF01380 SIS domain FY143_06840 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_06840 PF12804 MobA-like NTP transferase domain FY143_06840 PF14602 Hexapeptide repeat of succinyl-transferase FY143_06845 PF07729 FCD domain FY143_06845 PF00392 Bacterial regulatory proteins, gntR family FY143_06850 PF02608 ABC transporter substrate-binding protein PnrA-like FY143_06855 PF02653 Branched-chain amino acid transport system / permease component FY143_06860 PF02653 Branched-chain amino acid transport system / permease component FY143_06865 PF00005 ABC transporter FY143_06875 PF01494 FAD binding domain FY143_06880 PF03547 Membrane transport protein FY143_06885 PF02683 Cytochrome C biogenesis protein transmembrane region FY143_06905 PF12900 Pyridoxamine 5'-phosphate oxidase FY143_06920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_06925 PF00313 'Cold-shock' DNA-binding domain FY143_06990 PF00004 ATPase family associated with various cellular activities (AAA) FY143_06990 PF17862 AAA+ lid domain FY143_06990 PF06480 FtsH Extracellular FY143_06990 PF01434 Peptidase family M41 FY143_07045 PF12704 MacB-like periplasmic core domain FY143_07045 PF02687 FtsX-like permease family FY143_07045 PF00005 ABC transporter FY143_07050 PF12704 MacB-like periplasmic core domain FY143_07050 PF02687 FtsX-like permease family FY143_07050 PF00005 ABC transporter FY143_07060 PF01521 Iron-sulphur cluster biosynthesis FY143_07065 PF01883 Iron-sulfur cluster assembly protein FY143_07070 PF00266 Aminotransferase class-V FY143_07075 PF01458 Uncharacterized protein family (UPF0051) FY143_07080 PF00005 ABC transporter FY143_07085 PF01458 Uncharacterized protein family (UPF0051) FY143_07090 PF00266 Aminotransferase class-V FY143_07095 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY143_07100 PF03702 Anhydro-N-acetylmuramic acid kinase FY143_07105 PF00579 tRNA synthetases class I (W and Y) FY143_07115 PF00578 AhpC/TSA family FY143_07120 PF04305 Protein of unknown function (DUF455) FY143_07125 PF01551 Peptidase family M23 FY143_07125 PF08525 Opacity-associated protein A N-terminal motif FY143_07125 PF01476 LysM domain FY143_07130 PF00270 DEAD/DEAH box helicase FY143_07130 PF00271 Helicase conserved C-terminal domain FY143_07145 PF00834 Ribulose-phosphate 3 epimerase family FY143_07155 PF00206 Lyase FY143_07155 PF10397 Adenylosuccinate lyase C-terminus FY143_07165 PF01259 SAICAR synthetase FY143_07170 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY143_07190 PF00155 Aminotransferase class I and II FY143_07190 PF00392 Bacterial regulatory proteins, gntR family FY143_07200 PF00586 AIR synthase related protein, N-terminal domain FY143_07200 PF02769 AIR synthase related protein, C-terminal domain FY143_07200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY143_07220 PF00462 Glutaredoxin FY143_07225 PF07690 Major Facilitator Superfamily FY143_07230 PF00459 Inositol monophosphatase family FY143_07235 PF00459 Inositol monophosphatase family FY143_07240 PF01171 PP-loop family FY143_07245 PF04960 Glutaminase FY143_07250 PF00163 Ribosomal protein S4/S9 N-terminal domain FY143_07250 PF01479 S4 domain FY143_07255 PF03741 Integral membrane protein TerC family FY143_07270 PF00892 EamA-like transporter family FY143_07275 PF01810 LysE type translocator FY143_07285 PF01177 Asp/Glu/Hydantoin racemase FY143_07290 PF00588 SpoU rRNA Methylase family FY143_07300 PF00180 Isocitrate/isopropylmalate dehydrogenase FY143_07315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY143_07315 PF02272 DHHA1 domain FY143_07315 PF01411 tRNA synthetases class II (A) FY143_07320 PF00154 recA bacterial DNA recombination protein FY143_07325 PF00294 pfkB family carbohydrate kinase FY143_07330 PF04227 Indigoidine synthase A like protein FY143_07335 PF00691 OmpA family FY143_07335 PF01389 OmpA-like transmembrane domain FY143_07340 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_07345 PF00528 Binding-protein-dependent transport system inner membrane component FY143_07350 PF00528 Binding-protein-dependent transport system inner membrane component FY143_07355 PF06233 Usg-like family FY143_07360 PF08241 Methyltransferase domain FY143_07365 PF09084 NMT1/THI5 like FY143_07370 PF01037 Lrp/AsnC ligand binding domain FY143_07370 PF13404 AsnC-type helix-turn-helix domain FY143_07375 PF03167 Uracil DNA glycosylase superfamily FY143_07385 PF00989 PAS fold FY143_07385 PF00512 His Kinase A (phospho-acceptor) domain FY143_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_07390 PF01219 Prokaryotic diacylglycerol kinase FY143_07395 PF02277 Phosphoribosyltransferase FY143_07400 PF02654 Cobalamin-5-phosphate synthase FY143_07415 PF01061 ABC-2 type transporter FY143_07420 PF00005 ABC transporter FY143_07425 PF01925 Sulfite exporter TauE/SafE FY143_07435 PF00672 HAMP domain FY143_07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_07435 PF17200 Single Cache domain 2 FY143_07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_07435 PF00672 HAMP domain FY143_07435 PF17200 Single Cache domain 2 FY143_07445 PF16193 AAA C-terminal domain FY143_07445 PF12002 MgsA AAA+ ATPase C terminal FY143_07445 PF00004 ATPase family associated with various cellular activities (AAA) FY143_07450 PF00595 PDZ domain FY143_07450 PF13180 PDZ domain FY143_07465 PF00920 Dehydratase family FY143_07470 PF00174 Oxidoreductase molybdopterin binding domain FY143_07475 PF01794 Ferric reductase like transmembrane component FY143_07485 PF05675 Protein of unknown function (DUF817) FY143_07495 PF01196 Ribosomal protein L17 FY143_07500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY143_07500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY143_07500 PF01000 RNA polymerase Rpb3/RpoA insert domain FY143_07505 PF00411 Ribosomal protein S11 FY143_07510 PF00416 Ribosomal protein S13/S18 FY143_07520 PF00344 SecY translocase FY143_07525 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY143_07530 PF00327 Ribosomal protein L30p/L7e FY143_07535 PF00333 Ribosomal protein S5, N-terminal domain FY143_07535 PF03719 Ribosomal protein S5, C-terminal domain FY143_07540 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY143_07545 PF00347 Ribosomal protein L6 FY143_07550 PF00410 Ribosomal protein S8 FY143_07555 PF00253 Ribosomal protein S14p/S29e FY143_07560 PF00281 Ribosomal protein L5 FY143_07560 PF00673 ribosomal L5P family C-terminus FY143_07565 PF00467 KOW motif FY143_07565 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY143_07570 PF00238 Ribosomal protein L14p/L23e FY143_07575 PF00366 Ribosomal protein S17 FY143_07580 PF00831 Ribosomal L29 protein FY143_07585 PF00252 Ribosomal protein L16p/L10e FY143_07590 PF07650 KH domain FY143_07590 PF00189 Ribosomal protein S3, C-terminal domain FY143_07595 PF00237 Ribosomal protein L22p/L17e FY143_07600 PF00203 Ribosomal protein S19 FY143_07605 PF00181 Ribosomal Proteins L2, RNA binding domain FY143_07605 PF03947 Ribosomal Proteins L2, C-terminal domain FY143_07610 PF00276 Ribosomal protein L23 FY143_07615 PF00573 Ribosomal protein L4/L1 family FY143_07620 PF00297 Ribosomal protein L3 FY143_07625 PF00338 Ribosomal protein S10p/S20e FY143_07630 PF00009 Elongation factor Tu GTP binding domain FY143_07630 PF03144 Elongation factor Tu domain 2 FY143_07630 PF03143 Elongation factor Tu C-terminal domain FY143_07635 PF03144 Elongation factor Tu domain 2 FY143_07635 PF03764 Elongation factor G, domain IV FY143_07635 PF00009 Elongation factor Tu GTP binding domain FY143_07635 PF14492 Elongation Factor G, domain II FY143_07635 PF00679 Elongation factor G C-terminus FY143_07640 PF00177 Ribosomal protein S7p/S5e FY143_07645 PF00164 Ribosomal protein S12/S23 FY143_07660 PF04998 RNA polymerase Rpb1, domain 5 FY143_07660 PF05000 RNA polymerase Rpb1, domain 4 FY143_07660 PF00623 RNA polymerase Rpb1, domain 2 FY143_07660 PF04997 RNA polymerase Rpb1, domain 1 FY143_07660 PF04983 RNA polymerase Rpb1, domain 3 FY143_07665 PF04561 RNA polymerase Rpb2, domain 2 FY143_07665 PF04565 RNA polymerase Rpb2, domain 3 FY143_07665 PF10385 RNA polymerase beta subunit external 1 domain FY143_07665 PF00562 RNA polymerase Rpb2, domain 6 FY143_07665 PF04560 RNA polymerase Rpb2, domain 7 FY143_07665 PF04563 RNA polymerase beta subunit FY143_07675 PF00542 Ribosomal protein L7/L12 C-terminal domain FY143_07675 PF16320 Ribosomal protein L7/L12 dimerisation domain FY143_07680 PF00466 Ribosomal protein L10 FY143_07685 PF00687 Ribosomal protein L1p/L10e family FY143_07690 PF03946 Ribosomal protein L11, N-terminal domain FY143_07690 PF00298 Ribosomal protein L11, RNA binding domain FY143_07695 PF02357 Transcription termination factor nusG FY143_07695 PF00467 KOW motif FY143_07700 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY143_07715 PF03143 Elongation factor Tu C-terminal domain FY143_07715 PF00009 Elongation factor Tu GTP binding domain FY143_07715 PF03144 Elongation factor Tu domain 2 FY143_07720 PF03741 Integral membrane protein TerC family FY143_07750 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY143_07750 PF00588 SpoU rRNA Methylase family FY143_07755 PF03061 Thioesterase superfamily FY143_07780 PF13460 NAD(P)H-binding FY143_07785 PF01638 HxlR-like helix-turn-helix FY143_07795 PF02151 UvrB/uvrC motif FY143_07795 PF04851 Type III restriction enzyme, res subunit FY143_07795 PF00271 Helicase conserved C-terminal domain FY143_07795 PF17757 UvrB interaction domain FY143_07795 PF12344 Ultra-violet resistance protein B FY143_07800 PF00756 Putative esterase FY143_07800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY143_07820 PF01556 DnaJ C terminal domain FY143_07820 PF00684 DnaJ central domain FY143_07820 PF00226 DnaJ domain FY143_07830 PF00589 Phage integrase family FY143_07935 PF00990 Diguanylate cyclase, GGDEF domain FY143_07935 PF17151 Periplasmic sensor domain FY143_07945 PF08402 TOBE domain FY143_07945 PF00005 ABC transporter FY143_07955 PF01547 Bacterial extracellular solute-binding protein FY143_07960 PF00155 Aminotransferase class I and II FY143_07975 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY143_07975 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY143_07980 PF00440 Bacterial regulatory proteins, tetR family FY143_07985 PF12833 Helix-turn-helix domain FY143_07985 PF06719 AraC-type transcriptional regulator N-terminus FY143_07990 PF00107 Zinc-binding dehydrogenase FY143_07990 PF08240 Alcohol dehydrogenase GroES-like domain FY143_07995 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_08000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY143_08005 PF03472 Autoinducer binding domain FY143_08005 PF00196 Bacterial regulatory proteins, luxR family FY143_08010 PF13538 UvrD-like helicase C-terminal domain FY143_08010 PF14490 Helix-hairpin-helix containing domain FY143_08010 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY143_08015 PF01370 NAD dependent epimerase/dehydratase family FY143_08015 PF08338 Domain of unknown function (DUF1731) FY143_08040 PF04542 Sigma-70 region 2 FY143_08040 PF08281 Sigma-70, region 4 FY143_08050 PF01810 LysE type translocator FY143_08055 PF00248 Aldo/keto reductase family FY143_08070 PF10369 Small subunit of acetolactate synthase FY143_08075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY143_08075 PF00205 Thiamine pyrophosphate enzyme, central domain FY143_08075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY143_08095 PF13302 Acetyltransferase (GNAT) domain FY143_08105 PF13180 PDZ domain FY143_08110 PF01145 SPFH domain / Band 7 family FY143_08115 PF01145 SPFH domain / Band 7 family FY143_08120 PF00186 Dihydrofolate reductase FY143_08125 PF00303 Thymidylate synthase FY143_08165 PF02913 FAD linked oxidases, C-terminal domain FY143_08165 PF01565 FAD binding domain FY143_08170 PF00873 AcrB/AcrD/AcrF family FY143_08175 PF13533 Biotin-lipoyl like FY143_08185 PF13361 UvrD-like helicase C-terminal domain FY143_08185 PF00580 UvrD/REP helicase N-terminal domain FY143_08195 PF00440 Bacterial regulatory proteins, tetR family FY143_08195 PF13977 BetI-type transcriptional repressor, C-terminal FY143_08200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY143_08205 PF00561 alpha/beta hydrolase fold FY143_08225 PF00857 Isochorismatase family FY143_08245 PF01321 Creatinase/Prolidase N-terminal domain FY143_08245 PF00557 Metallopeptidase family M24 FY143_08255 PF02630 SCO1/SenC FY143_08265 PF01584 CheW-like domain FY143_08275 PF00929 Exonuclease FY143_08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_08280 PF03466 LysR substrate binding domain FY143_08290 PF00583 Acetyltransferase (GNAT) family FY143_08300 PF12826 Helix-hairpin-helix motif FY143_08300 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY143_08300 PF03120 NAD-dependent DNA ligase OB-fold domain FY143_08300 PF01653 NAD-dependent DNA ligase adenylation domain FY143_08300 PF00533 BRCA1 C Terminus (BRCT) domain FY143_08315 PF02463 RecF/RecN/SMC N terminal domain FY143_08320 PF13525 Outer membrane lipoprotein FY143_08325 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY143_08330 PF00091 Tubulin/FtsZ family, GTPase domain FY143_08330 PF12327 FtsZ family, C-terminal domain FY143_08335 PF02491 SHS2 domain inserted in FTSA FY143_08340 PF03799 Cell division protein FtsQ FY143_08340 PF08478 POTRA domain, FtsQ-type FY143_08345 PF01820 D-ala D-ala ligase N-terminus FY143_08345 PF07478 D-ala D-ala ligase C-terminus FY143_08350 PF00083 Sugar (and other) transporter FY143_08350 PF07690 Major Facilitator Superfamily FY143_08355 PF00990 Diguanylate cyclase, GGDEF domain FY143_08360 PF01565 FAD binding domain FY143_08360 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY143_08365 PF01225 Mur ligase family, catalytic domain FY143_08365 PF02875 Mur ligase family, glutamate ligase domain FY143_08365 PF08245 Mur ligase middle domain FY143_08370 PF04101 Glycosyltransferase family 28 C-terminal domain FY143_08370 PF03033 Glycosyltransferase family 28 N-terminal domain FY143_08375 PF01098 Cell cycle protein FY143_08380 PF02875 Mur ligase family, glutamate ligase domain FY143_08380 PF08245 Mur ligase middle domain FY143_08385 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY143_08385 PF00953 Glycosyl transferase family 4 FY143_08390 PF08245 Mur ligase middle domain FY143_08390 PF02875 Mur ligase family, glutamate ligase domain FY143_08390 PF01225 Mur ligase family, catalytic domain FY143_08395 PF08245 Mur ligase middle domain FY143_08395 PF02875 Mur ligase family, glutamate ligase domain FY143_08395 PF01225 Mur ligase family, catalytic domain FY143_08400 PF00905 Penicillin binding protein transpeptidase domain FY143_08400 PF03717 Penicillin-binding Protein dimerisation domain FY143_08410 PF01795 MraW methylase family FY143_08415 PF02381 MraZ protein, putative antitoxin-like FY143_08440 PF01510 N-acetylmuramoyl-L-alanine amidase FY143_08445 PF00226 DnaJ domain FY143_08445 PF05099 Tellurite resistance protein TerB FY143_08450 PF00365 Phosphofructokinase FY143_08470 PF13649 Methyltransferase domain FY143_08475 PF01183 Glycosyl hydrolases family 25 FY143_08485 PF02219 Methylenetetrahydrofolate reductase FY143_08490 PF01209 ubiE/COQ5 methyltransferase family FY143_08495 PF00005 ABC transporter FY143_08495 PF12848 ABC transporter FY143_08500 PF12146 Serine aminopeptidase, S33 FY143_08505 PF02515 CoA-transferase family III FY143_08510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY143_08510 PF00205 Thiamine pyrophosphate enzyme, central domain FY143_08510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY143_08520 PF01042 Endoribonuclease L-PSP FY143_08535 PF01476 LysM domain FY143_08535 PF03734 L,D-transpeptidase catalytic domain FY143_08550 PF10609 NUBPL iron-transfer P-loop NTPase FY143_08560 PF00465 Iron-containing alcohol dehydrogenase FY143_08565 PF00171 Aldehyde dehydrogenase family FY143_08570 PF03951 Glutamine synthetase, beta-Grasp domain FY143_08570 PF00120 Glutamine synthetase, catalytic domain FY143_08575 PF13520 Amino acid permease FY143_08585 PF01380 SIS domain FY143_08585 PF01418 Helix-turn-helix domain, rpiR family FY143_08605 PF08402 TOBE domain FY143_08605 PF00005 ABC transporter FY143_08610 PF08240 Alcohol dehydrogenase GroES-like domain FY143_08610 PF00107 Zinc-binding dehydrogenase FY143_08625 PF07690 Major Facilitator Superfamily FY143_08630 PF02574 Homocysteine S-methyltransferase FY143_08630 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY143_08630 PF02607 B12 binding domain FY143_08630 PF00809 Pterin binding enzyme FY143_08630 PF02310 B12 binding domain FY143_08650 PF13505 Outer membrane protein beta-barrel domain FY143_08665 PF04402 Protein of unknown function (DUF541) FY143_08675 PF01894 Uncharacterised protein family UPF0047 FY143_08680 PF00360 Phytochrome region FY143_08680 PF01590 GAF domain FY143_08680 PF08446 PAS fold FY143_08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_08680 PF00512 His Kinase A (phospho-acceptor) domain FY143_08690 PF03979 Sigma-70 factor, region 1.1 FY143_08690 PF04546 Sigma-70, non-essential region FY143_08690 PF04542 Sigma-70 region 2 FY143_08690 PF04545 Sigma-70, region 4 FY143_08690 PF04539 Sigma-70 region 3 FY143_08690 PF00140 Sigma-70 factor, region 1.2 FY143_08695 PF08275 DNA primase catalytic core, N-terminal domain FY143_08695 PF10410 DnaB-helicase binding domain of primase FY143_08695 PF08278 DNA primase DnaG DnaB-binding FY143_08695 PF01807 CHC2 zinc finger FY143_08705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY143_08705 PF00117 Glutamine amidotransferase class-I FY143_08710 PF01554 MatE FY143_08715 PF00672 HAMP domain FY143_08715 PF02743 Cache domain FY143_08715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_08725 PF04228 Putative neutral zinc metallopeptidase FY143_08740 PF02142 MGS-like domain FY143_08740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_08740 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY143_08745 PF17158 Membrane-associated sensor, integral membrane domain FY143_08745 PF00990 Diguanylate cyclase, GGDEF domain FY143_08750 PF03167 Uracil DNA glycosylase superfamily FY143_08760 PF03449 Transcription elongation factor, N-terminal FY143_08760 PF01272 Transcription elongation factor, GreA/GreB, C-term FY143_08765 PF00534 Glycosyl transferases group 1 FY143_08770 PF01037 Lrp/AsnC ligand binding domain FY143_08775 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_08780 PF03466 LysR substrate binding domain FY143_08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_08790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_08805 PF03466 LysR substrate binding domain FY143_08815 PF01699 Sodium/calcium exchanger protein FY143_08820 PF00155 Aminotransferase class I and II FY143_08825 PF00563 EAL domain FY143_08825 PF05231 MASE1 FY143_08840 PF00313 'Cold-shock' DNA-binding domain FY143_08845 PF00753 Metallo-beta-lactamase superfamily FY143_08855 PF12802 MarR family FY143_08860 PF00072 Response regulator receiver domain FY143_08860 PF00486 Transcriptional regulatory protein, C terminal FY143_08865 PF00672 HAMP domain FY143_08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_08865 PF00512 His Kinase A (phospho-acceptor) domain FY143_08865 PF16527 Two-component sensor protein CpxA, periplasmic domain FY143_08870 PF01588 Putative tRNA binding domain FY143_08875 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY143_08875 PF03807 NADP oxidoreductase coenzyme F420-dependent FY143_08890 PF01790 Prolipoprotein diacylglyceryl transferase FY143_08900 PF02578 Multi-copper polyphenol oxidoreductase laccase FY143_08915 PF14572 Phosphoribosyl synthetase-associated domain FY143_08915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY143_08925 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY143_08935 PF00535 Glycosyl transferase family 2 FY143_08940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_08940 PF00672 HAMP domain FY143_08945 PF00171 Aldehyde dehydrogenase family FY143_08950 PF02954 Bacterial regulatory protein, Fis family FY143_08950 PF00158 Sigma-54 interaction domain FY143_08950 PF13426 PAS domain FY143_08955 PF13188 PAS domain FY143_08955 PF03707 Bacterial signalling protein N terminal repeat FY143_08955 PF00563 EAL domain FY143_08955 PF00990 Diguanylate cyclase, GGDEF domain FY143_08960 PF14693 Ribosomal protein TL5, C-terminal domain FY143_08960 PF01386 Ribosomal L25p family FY143_08965 PF00563 EAL domain FY143_08965 PF00990 Diguanylate cyclase, GGDEF domain FY143_08965 PF08447 PAS fold FY143_08965 PF08448 PAS fold FY143_08975 PF01195 Peptidyl-tRNA hydrolase FY143_08985 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY143_08990 PF06071 Protein of unknown function (DUF933) FY143_08990 PF01926 50S ribosome-binding GTPase FY143_09010 PF00156 Phosphoribosyl transferase domain FY143_09020 PF00033 Cytochrome b/b6/petB FY143_09020 PF02167 Cytochrome C1 family FY143_09020 PF00032 Cytochrome b(C-terminal)/b6/petD FY143_09025 PF00032 Cytochrome b(C-terminal)/b6/petD FY143_09025 PF00033 Cytochrome b/b6/petB FY143_09030 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY143_09030 PF00355 Rieske [2Fe-2S] domain FY143_09040 PF00664 ABC transporter transmembrane region FY143_09040 PF00005 ABC transporter FY143_09045 PF00664 ABC transporter transmembrane region FY143_09045 PF00005 ABC transporter FY143_09050 PF00588 SpoU rRNA Methylase family FY143_09055 PF02690 Na+/Pi-cotransporter FY143_09065 PF01218 Coproporphyrinogen III oxidase FY143_09080 PF01743 Poly A polymerase head domain FY143_09080 PF12627 Probable RNA and SrmB- binding site of polymerase A FY143_09080 PF13735 tRNA nucleotidyltransferase domain 2 putative FY143_09085 PF00293 NUDIX domain FY143_09095 PF07726 ATPase family associated with various cellular activities (AAA) FY143_09095 PF17863 AAA lid domain FY143_09115 PF00583 Acetyltransferase (GNAT) family FY143_09120 PF07690 Major Facilitator Superfamily FY143_09130 PF13409 Glutathione S-transferase, N-terminal domain FY143_09145 PF00682 HMGL-like FY143_09145 PF08502 LeuA allosteric (dimerisation) domain FY143_09150 PF03594 Benzoate membrane transport protein FY143_09155 PF06532 Negative regulator of sigma F FY143_09160 PF04542 Sigma-70 region 2 FY143_09160 PF04545 Sigma-70, region 4 FY143_09170 PF00574 Clp protease FY143_09175 PF04955 HupE / UreJ protein FY143_09185 PF14489 QueF-like protein FY143_09190 PF01545 Cation efflux family FY143_09190 PF16916 Dimerisation domain of Zinc Transporter FY143_09200 PF13458 Periplasmic binding protein FY143_09210 PF01022 Bacterial regulatory protein, arsR family FY143_09220 PF00571 CBS domain FY143_09220 PF00005 ABC transporter FY143_09225 PF00528 Binding-protein-dependent transport system inner membrane component FY143_09230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY143_09235 PF00265 Thymidine kinase FY143_09240 PF00127 Copper binding proteins, plastocyanin/azurin family FY143_09250 PF00196 Bacterial regulatory proteins, luxR family FY143_09250 PF03472 Autoinducer binding domain FY143_09255 PF03350 Uncharacterized protein family, UPF0114 FY143_09260 PF07715 TonB-dependent Receptor Plug Domain FY143_09260 PF00593 TonB dependent receptor FY143_09260 PF04886 PT repeat FY143_09270 PF04715 Anthranilate synthase component I, N terminal region FY143_09270 PF00425 chorismate binding enzyme FY143_09270 PF00117 Glutamine amidotransferase class-I FY143_09275 PF11871 Domain of unknown function (DUF3391) FY143_09275 PF01966 HD domain FY143_09280 PF13382 Adenine deaminase C-terminal domain FY143_09280 PF01979 Amidohydrolase family FY143_09285 PF00583 Acetyltransferase (GNAT) family FY143_09290 PF00128 Alpha amylase, catalytic domain FY143_09295 PF00294 pfkB family carbohydrate kinase FY143_09310 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY143_09310 PF01926 50S ribosome-binding GTPase FY143_09330 PF05992 SbmA/BacA-like family FY143_09340 PF00557 Metallopeptidase family M24 FY143_09360 PF01799 [2Fe-2S] binding domain FY143_09360 PF00111 2Fe-2S iron-sulfur cluster binding domain FY143_09365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY143_09365 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY143_09375 PF03466 LysR substrate binding domain FY143_09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_09390 PF01979 Amidohydrolase family FY143_09405 PF01070 FMN-dependent dehydrogenase FY143_09410 PF00893 Small Multidrug Resistance protein FY143_09415 PF17932 Tetracyclin repressor-like, C-terminal domain FY143_09415 PF00440 Bacterial regulatory proteins, tetR family FY143_09420 PF00768 D-alanyl-D-alanine carboxypeptidase FY143_09420 PF07943 Penicillin-binding protein 5, C-terminal domain FY143_09430 PF00576 HIUase/Transthyretin family FY143_09435 PF04115 Ureidoglycolate lyase FY143_09450 PF01014 Uricase FY143_09450 PF09349 OHCU decarboxylase FY143_09460 PF06299 Protein of unknown function (DUF1045) FY143_09465 PF01266 FAD dependent oxidoreductase FY143_09470 PF01266 FAD dependent oxidoreductase FY143_09470 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY143_09475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY143_09475 PF00072 Response regulator receiver domain FY143_09475 PF01627 Hpt domain FY143_09475 PF00512 His Kinase A (phospho-acceptor) domain FY143_09475 PF00672 HAMP domain FY143_09475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_09480 PF00270 DEAD/DEAH box helicase FY143_09480 PF00271 Helicase conserved C-terminal domain FY143_09490 PF07681 DoxX FY143_09495 PF03734 L,D-transpeptidase catalytic domain FY143_09495 PF01476 LysM domain FY143_09505 PF14403 Circularly permuted ATP-grasp type 2 FY143_09510 PF14403 Circularly permuted ATP-grasp type 2 FY143_09510 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY143_09515 PF01841 Transglutaminase-like superfamily FY143_09515 PF08379 Bacterial transglutaminase-like N-terminal region FY143_09535 PF00300 Histidine phosphatase superfamily (branch 1) FY143_09545 PF02653 Branched-chain amino acid transport system / permease component FY143_09550 PF00005 ABC transporter FY143_09555 PF13407 Periplasmic binding protein domain FY143_09560 PF03466 LysR substrate binding domain FY143_09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_09590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_09590 PF00672 HAMP domain FY143_09595 PF02574 Homocysteine S-methyltransferase FY143_09595 PF00809 Pterin binding enzyme FY143_09595 PF02310 B12 binding domain FY143_09595 PF02607 B12 binding domain FY143_09595 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY143_09600 PF00528 Binding-protein-dependent transport system inner membrane component FY143_09605 PF00528 Binding-protein-dependent transport system inner membrane component FY143_09610 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_09615 PF00005 ABC transporter FY143_09635 PF00331 Glycosyl hydrolase family 10 FY143_09640 PF00535 Glycosyl transferase family 2 FY143_09655 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY143_09670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY143_09670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY143_09670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY143_09670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY143_09675 PF01152 Bacterial-like globin FY143_09695 PF08362 YcdC-like protein, C-terminal region FY143_09695 PF00440 Bacterial regulatory proteins, tetR family FY143_09700 PF07687 Peptidase dimerisation domain FY143_09700 PF01546 Peptidase family M20/M25/M40 FY143_09705 PF01979 Amidohydrolase family FY143_09710 PF00293 NUDIX domain FY143_09715 PF00005 ABC transporter FY143_09720 PF00528 Binding-protein-dependent transport system inner membrane component FY143_09725 PF00528 Binding-protein-dependent transport system inner membrane component FY143_09740 PF00873 AcrB/AcrD/AcrF family FY143_09750 PF00753 Metallo-beta-lactamase superfamily FY143_09755 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY143_09760 PF01730 UreF FY143_09765 PF05194 UreE urease accessory protein, C-terminal domain FY143_09765 PF02814 UreE urease accessory protein, N-terminal domain FY143_09770 PF08534 Redoxin FY143_09780 PF01979 Amidohydrolase family FY143_09780 PF00449 Urease alpha-subunit, N-terminal domain FY143_09790 PF07007 Lysozyme inhibitor LprI FY143_09800 PF00699 Urease beta subunit FY143_09805 PF06906 Protein of unknown function (DUF1272) FY143_09810 PF00547 Urease, gamma subunit FY143_09815 PF01774 UreD urease accessory protein FY143_09825 PF00005 ABC transporter FY143_09830 PF00005 ABC transporter FY143_09830 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY143_09840 PF02653 Branched-chain amino acid transport system / permease component FY143_09850 PF10931 Protein of unknown function (DUF2735) FY143_09855 PF03951 Glutamine synthetase, beta-Grasp domain FY143_09855 PF00120 Glutamine synthetase, catalytic domain FY143_09865 PF00989 PAS fold FY143_09865 PF01627 Hpt domain FY143_09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_09865 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY143_09865 PF00512 His Kinase A (phospho-acceptor) domain FY143_09865 PF00072 Response regulator receiver domain FY143_09870 PF00072 Response regulator receiver domain FY143_09880 PF13458 Periplasmic binding protein FY143_09890 PF00005 ABC transporter FY143_09895 PF00005 ABC transporter FY143_09895 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY143_09900 PF02653 Branched-chain amino acid transport system / permease component FY143_09900 PF11862 Domain of unknown function (DUF3382) FY143_09905 PF02653 Branched-chain amino acid transport system / permease component FY143_09910 PF00459 Inositol monophosphatase family FY143_09940 PF00486 Transcriptional regulatory protein, C terminal FY143_09940 PF00072 Response regulator receiver domain FY143_09960 PF10090 Histidine phosphotransferase C-terminal domain FY143_09975 PF00588 SpoU rRNA Methylase family FY143_09985 PF00849 RNA pseudouridylate synthase FY143_10000 PF04545 Sigma-70, region 4 FY143_10000 PF04542 Sigma-70 region 2 FY143_10000 PF00140 Sigma-70 factor, region 1.2 FY143_10010 PF00709 Adenylosuccinate synthetase FY143_10035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_10045 PF03167 Uracil DNA glycosylase superfamily FY143_10050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_10055 PF04304 Protein of unknown function (DUF454) FY143_10060 PF00005 ABC transporter FY143_10065 PF01032 FecCD transport family FY143_10070 PF01497 Periplasmic binding protein FY143_10080 PF06228 Haem utilisation ChuX/HutX FY143_10090 PF00551 Formyl transferase FY143_10100 PF00672 HAMP domain FY143_10100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_10100 PF00512 His Kinase A (phospho-acceptor) domain FY143_10105 PF00072 Response regulator receiver domain FY143_10105 PF00486 Transcriptional regulatory protein, C terminal FY143_10115 PF03401 Tripartite tricarboxylate transporter family receptor FY143_10125 PF01970 Tripartite tricarboxylate transporter TctA family FY143_10140 PF01032 FecCD transport family FY143_10145 PF01032 FecCD transport family FY143_10150 PF00005 ABC transporter FY143_10155 PF00210 Ferritin-like domain FY143_10170 PF00672 HAMP domain FY143_10170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_10175 PF00248 Aldo/keto reductase family FY143_10180 PF07690 Major Facilitator Superfamily FY143_10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_10185 PF03466 LysR substrate binding domain FY143_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_10190 PF03466 LysR substrate binding domain FY143_10195 PF07859 alpha/beta hydrolase fold FY143_10200 PF13533 Biotin-lipoyl like FY143_10205 PF00873 AcrB/AcrD/AcrF family FY143_10220 PF13396 Phospholipase_D-nuclease N-terminal FY143_10220 PF13091 PLD-like domain FY143_10225 PF08543 Phosphomethylpyrimidine kinase FY143_10230 PF00484 Carbonic anhydrase FY143_10240 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY143_10240 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY143_10250 PF00083 Sugar (and other) transporter FY143_10255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY143_10255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY143_10255 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY143_10260 PF02233 NAD(P) transhydrogenase beta subunit FY143_10265 PF01613 Flavin reductase like domain FY143_10270 PF00881 Nitroreductase family FY143_10275 PF00561 alpha/beta hydrolase fold FY143_10280 PF01042 Endoribonuclease L-PSP FY143_10285 PF00857 Isochorismatase family FY143_10290 PF00296 Luciferase-like monooxygenase FY143_10295 PF01126 Heme oxygenase FY143_10300 PF00701 Dihydrodipicolinate synthetase family FY143_10305 PF00392 Bacterial regulatory proteins, gntR family FY143_10305 PF07729 FCD domain FY143_10315 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10320 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10325 PF03459 TOBE domain FY143_10325 PF17912 MalK OB fold domain FY143_10325 PF00005 ABC transporter FY143_10330 PF00294 pfkB family carbohydrate kinase FY143_10335 PF03576 Peptidase family S58 FY143_10340 PF01063 Amino-transferase class IV FY143_10345 PF03466 LysR substrate binding domain FY143_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_10355 PF00005 ABC transporter FY143_10355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_10360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_10360 PF00005 ABC transporter FY143_10365 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_10365 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10370 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_10380 PF01244 Membrane dipeptidase (Peptidase family M19) FY143_10390 PF09924 Uncharacterised conserved protein (DUF2156) FY143_10390 PF03706 Lysylphosphatidylglycerol synthase TM region FY143_10410 PF07690 Major Facilitator Superfamily FY143_10420 PF04444 Catechol dioxygenase N terminus FY143_10420 PF00775 Dioxygenase FY143_10425 PF00465 Iron-containing alcohol dehydrogenase FY143_10430 PF04909 Amidohydrolase FY143_10435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY143_10435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_10440 PF01613 Flavin reductase like domain FY143_10455 PF00512 His Kinase A (phospho-acceptor) domain FY143_10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_10460 PF00486 Transcriptional regulatory protein, C terminal FY143_10460 PF00072 Response regulator receiver domain FY143_10470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_10475 PF08402 TOBE domain FY143_10475 PF00005 ABC transporter FY143_10480 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10495 PF00486 Transcriptional regulatory protein, C terminal FY143_10495 PF00072 Response regulator receiver domain FY143_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_10500 PF00072 Response regulator receiver domain FY143_10500 PF13188 PAS domain FY143_10500 PF08448 PAS fold FY143_10500 PF00512 His Kinase A (phospho-acceptor) domain FY143_10510 PF13614 AAA domain FY143_10515 PF00072 Response regulator receiver domain FY143_10515 PF01339 CheB methylesterase FY143_10520 PF03705 CheR methyltransferase, all-alpha domain FY143_10520 PF01739 CheR methyltransferase, SAM binding domain FY143_10525 PF01584 CheW-like domain FY143_10530 PF02203 Tar ligand binding domain homologue FY143_10530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_10530 PF00672 HAMP domain FY143_10535 PF01584 CheW-like domain FY143_10540 PF02895 Signal transducing histidine kinase, homodimeric domain FY143_10540 PF09078 CheY binding FY143_10540 PF01584 CheW-like domain FY143_10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_10540 PF01627 Hpt domain FY143_10545 PF00072 Response regulator receiver domain FY143_10555 PF00072 Response regulator receiver domain FY143_10560 PF00296 Luciferase-like monooxygenase FY143_10565 PF01613 Flavin reductase like domain FY143_10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_10570 PF03466 LysR substrate binding domain FY143_10575 PF00355 Rieske [2Fe-2S] domain FY143_10580 PF00005 ABC transporter FY143_10585 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_10590 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10595 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10605 PF01565 FAD binding domain FY143_10605 PF02913 FAD linked oxidases, C-terminal domain FY143_10610 PF00155 Aminotransferase class I and II FY143_10615 PF00175 Oxidoreductase NAD-binding domain FY143_10615 PF00970 Oxidoreductase FAD-binding domain FY143_10615 PF00042 Globin FY143_10650 PF01259 SAICAR synthetase FY143_10660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY143_10660 PF00529 HlyD membrane-fusion protein of T1SS FY143_10665 PF00873 AcrB/AcrD/AcrF family FY143_10670 PF02321 Outer membrane efflux protein FY143_10675 PF01132 Elongation factor P (EF-P) OB domain FY143_10675 PF08207 Elongation factor P (EF-P) KOW-like domain FY143_10675 PF09285 Elongation factor P, C-terminal FY143_10680 PF00152 tRNA synthetases class II (D, K and N) FY143_10685 PF04055 Radical SAM superfamily FY143_10685 PF12544 Lysine-2,3-aminomutase FY143_10700 PF03466 LysR substrate binding domain FY143_10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_10705 PF01266 FAD dependent oxidoreductase FY143_10715 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10720 PF00005 ABC transporter FY143_10720 PF03459 TOBE domain FY143_10730 PF03576 Peptidase family S58 FY143_10735 PF05690 Thiazole biosynthesis protein ThiG FY143_10745 PF01266 FAD dependent oxidoreductase FY143_10750 PF01964 Radical SAM ThiC family FY143_10750 PF13667 ThiC-associated domain FY143_10755 PF00550 Phosphopantetheine attachment site FY143_10785 PF00664 ABC transporter transmembrane region FY143_10785 PF00005 ABC transporter FY143_10790 PF00027 Cyclic nucleotide-binding domain FY143_10790 PF13545 Crp-like helix-turn-helix domain FY143_10800 PF00211 Adenylate and Guanylate cyclase catalytic domain FY143_10800 PF00672 HAMP domain FY143_10810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY143_10810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY143_10810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY143_10815 PF13439 Glycosyltransferase Family 4 FY143_10815 PF00534 Glycosyl transferases group 1 FY143_10830 PF00005 ABC transporter FY143_10830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_10835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_10840 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10845 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_10845 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10855 PF00534 Glycosyl transferases group 1 FY143_10855 PF13439 Glycosyltransferase Family 4 FY143_10860 PF04101 Glycosyltransferase family 28 C-terminal domain FY143_10860 PF03033 Glycosyltransferase family 28 N-terminal domain FY143_10865 PF03932 CutC family FY143_10870 PF07690 Major Facilitator Superfamily FY143_10880 PF00728 Glycosyl hydrolase family 20, catalytic domain FY143_10880 PF02838 Glycosyl hydrolase family 20, domain 2 FY143_10890 PF01418 Helix-turn-helix domain, rpiR family FY143_10890 PF01380 SIS domain FY143_10900 PF00005 ABC transporter FY143_10900 PF17912 MalK OB fold domain FY143_10905 PF01547 Bacterial extracellular solute-binding protein FY143_10910 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10915 PF00528 Binding-protein-dependent transport system inner membrane component FY143_10925 PF00392 Bacterial regulatory proteins, gntR family FY143_10925 PF07702 UTRA domain FY143_10930 PF01380 SIS domain FY143_10935 PF01979 Amidohydrolase family FY143_10940 PF00480 ROK family FY143_10945 PF01494 FAD binding domain FY143_10950 PF01569 PAP2 superfamily FY143_10955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY143_10955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY143_10955 PF13288 DXP reductoisomerase C-terminal domain FY143_10960 PF00155 Aminotransferase class I and II FY143_10970 PF17243 POTRA domain TamA domain 1 FY143_10970 PF01103 Surface antigen FY143_10970 PF07244 Surface antigen variable number repeat FY143_10980 PF01584 CheW-like domain FY143_10985 PF08447 PAS fold FY143_10985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_10985 PF13426 PAS domain FY143_10990 PF02634 FdhD/NarQ family FY143_10995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY143_11000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY143_11000 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY143_11005 PF00231 ATP synthase FY143_11010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY143_11010 PF00306 ATP synthase alpha/beta chain, C terminal domain FY143_11010 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY143_11015 PF00213 ATP synthase delta (OSCP) subunit FY143_11025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY143_11025 PF18074 Primosomal protein N C-terminal domain FY143_11025 PF17764 3′ DNA-binding domain (3′BD) FY143_11025 PF00270 DEAD/DEAH box helicase FY143_11030 PF02899 Phage integrase, N-terminal SAM-like domain FY143_11030 PF00589 Phage integrase family FY143_11050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY143_11050 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_11055 PF01810 LysE type translocator FY143_11065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY143_11065 PF00364 Biotin-requiring enzyme FY143_11065 PF02817 e3 binding domain FY143_11070 PF16870 2-oxoglutarate dehydrogenase C-terminal FY143_11070 PF16078 2-oxoglutarate dehydrogenase N-terminus FY143_11070 PF00676 Dehydrogenase E1 component FY143_11070 PF02779 Transketolase, pyrimidine binding domain FY143_11075 PF02629 CoA binding domain FY143_11075 PF00549 CoA-ligase FY143_11080 PF08442 ATP-grasp domain FY143_11080 PF00549 CoA-ligase FY143_11085 PF00056 lactate/malate dehydrogenase, NAD binding domain FY143_11085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY143_11090 PF03969 AFG1-like ATPase FY143_11095 PF02974 Protease inhibitor Inh FY143_11100 PF13237 4Fe-4S dicluster domain FY143_11100 PF13085 2Fe-2S iron-sulfur cluster binding domain FY143_11105 PF02910 Fumarate reductase flavoprotein C-term FY143_11105 PF00890 FAD binding domain FY143_11115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY143_11140 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY143_11140 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY143_11145 PF00814 Glycoprotease family FY143_11150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY143_11150 PF03900 Porphobilinogen deaminase, C-terminal domain FY143_11175 PF00117 Glutamine amidotransferase class-I FY143_11185 PF02325 YGGT family FY143_11190 PF02594 Uncharacterised ACR, YggU family COG1872 FY143_11195 PF00719 Inorganic pyrophosphatase FY143_11205 PF03144 Elongation factor Tu domain 2 FY143_11205 PF00009 Elongation factor Tu GTP binding domain FY143_11205 PF00679 Elongation factor G C-terminus FY143_11210 PF01432 Peptidase family M3 FY143_11220 PF01047 MarR family FY143_11225 PF07690 Major Facilitator Superfamily FY143_11230 PF00764 Arginosuccinate synthase FY143_11235 PF00106 short chain dehydrogenase FY143_11240 PF01810 LysE type translocator FY143_11245 PF00005 ABC transporter FY143_11250 PF02653 Branched-chain amino acid transport system / permease component FY143_11260 PF04055 Radical SAM superfamily FY143_11275 PF01329 Pterin 4 alpha carbinolamine dehydratase FY143_11280 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY143_11285 PF02834 LigT like Phosphoesterase FY143_11290 PF13472 GDSL-like Lipase/Acylhydrolase family FY143_11295 PF00005 ABC transporter FY143_11305 PF01027 Inhibitor of apoptosis-promoting Bax1 FY143_11320 PF00330 Aconitase family (aconitate hydratase) FY143_11320 PF00694 Aconitase C-terminal domain FY143_11325 PF00005 ABC transporter FY143_11330 PF03379 CcmB protein FY143_11335 PF01578 Cytochrome C assembly protein FY143_11345 PF08534 Redoxin FY143_11350 PF00990 Diguanylate cyclase, GGDEF domain FY143_11355 PF10755 Protein of unknown function (DUF2585) FY143_11360 PF04279 Intracellular septation protein A FY143_11365 PF00448 SRP54-type protein, GTPase domain FY143_11365 PF02881 SRP54-type protein, helical bundle domain FY143_11370 PF00919 Uncharacterized protein family UPF0004 FY143_11370 PF04055 Radical SAM superfamily FY143_11375 PF01678 Diaminopimelate epimerase FY143_11380 PF12706 Beta-lactamase superfamily domain FY143_11385 PF00448 SRP54-type protein, GTPase domain FY143_11385 PF02881 SRP54-type protein, helical bundle domain FY143_11385 PF02978 Signal peptide binding domain FY143_11390 PF01817 Chorismate mutase type II FY143_11390 PF02153 Prephenate dehydrogenase FY143_11395 PF00886 Ribosomal protein S16 FY143_11400 PF01782 RimM N-terminal domain FY143_11400 PF05239 PRC-barrel domain FY143_11405 PF01746 tRNA (Guanine-1)-methyltransferase FY143_11415 PF01245 Ribosomal protein L19 FY143_11420 PF00664 ABC transporter transmembrane region FY143_11420 PF00005 ABC transporter FY143_11425 PF00529 HlyD membrane-fusion protein of T1SS FY143_11425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY143_11435 PF07690 Major Facilitator Superfamily FY143_11440 PF00330 Aconitase family (aconitate hydratase) FY143_11445 PF01435 Peptidase family M48 FY143_11450 PF00005 ABC transporter FY143_11455 PF00528 Binding-protein-dependent transport system inner membrane component FY143_11460 PF01547 Bacterial extracellular solute-binding protein FY143_11470 PF16326 ABC transporter C-terminal domain FY143_11470 PF00005 ABC transporter FY143_11480 PF04204 Homoserine O-succinyltransferase FY143_11485 PF01263 Aldose 1-epimerase FY143_11490 PF00912 Transglycosylase FY143_11495 PF00348 Polyprenyl synthetase FY143_11500 PF13488 Glycine zipper FY143_11500 PF00691 OmpA family FY143_11505 PF04551 GcpE protein FY143_11510 PF07690 Major Facilitator Superfamily FY143_11515 PF00455 DeoR C terminal sensor domain FY143_11515 PF08220 DeoR-like helix-turn-helix domain FY143_11520 PF02785 Biotin carboxylase C-terminal domain FY143_11520 PF00364 Biotin-requiring enzyme FY143_11520 PF02436 Conserved carboxylase domain FY143_11520 PF00682 HMGL-like FY143_11520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_11520 PF00289 Biotin carboxylase, N-terminal domain FY143_11525 PF00072 Response regulator receiver domain FY143_11525 PF00196 Bacterial regulatory proteins, luxR family FY143_11530 PF00664 ABC transporter transmembrane region FY143_11530 PF00005 ABC transporter FY143_11535 PF06165 Glycosyltransferase family 36 FY143_11535 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY143_11535 PF10091 Putative glucoamylase FY143_11540 PF07687 Peptidase dimerisation domain FY143_11540 PF01546 Peptidase family M20/M25/M40 FY143_11545 PF01266 FAD dependent oxidoreductase FY143_11550 PF00291 Pyridoxal-phosphate dependent enzyme FY143_11555 PF00920 Dehydratase family FY143_11560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY143_11560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY143_11565 PF01370 NAD dependent epimerase/dehydratase family FY143_11570 PF01565 FAD binding domain FY143_11570 PF02913 FAD linked oxidases, C-terminal domain FY143_11575 PF00392 Bacterial regulatory proteins, gntR family FY143_11575 PF07729 FCD domain FY143_11585 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY143_11590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_11595 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_11600 PF16177 Acetyl-coenzyme A synthetase N-terminus FY143_11600 PF00501 AMP-binding enzyme FY143_11600 PF13193 AMP-binding enzyme C-terminal domain FY143_11610 PF01168 Alanine racemase, N-terminal domain FY143_11615 PF08264 Anticodon-binding domain of tRNA FY143_11615 PF00133 tRNA synthetases class I (I, L, M and V) FY143_11615 PF13603 Leucyl-tRNA synthetase, Domain 2 FY143_11630 PF11953 Domain of unknown function (DUF3470) FY143_11630 PF00037 4Fe-4S binding domain FY143_11635 PF01479 S4 domain FY143_11635 PF00579 tRNA synthetases class I (W and Y) FY143_11645 PF01494 FAD binding domain FY143_11655 PF00543 Nitrogen regulatory protein P-II FY143_11660 PF00909 Ammonium Transporter Family FY143_11665 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY143_11665 PF17854 FtsK alpha domain FY143_11665 PF09397 Ftsk gamma domain FY143_11665 PF01580 FtsK/SpoIIIE family FY143_11670 PF03548 Outer membrane lipoprotein carrier protein LolA FY143_11685 PF00072 Response regulator receiver domain FY143_11685 PF00486 Transcriptional regulatory protein, C terminal FY143_11695 PF02559 CarD-like/TRCF domain FY143_11700 PF05088 Bacterial NAD-glutamate dehydrogenase FY143_11705 PF11700 Vacuole effluxer Atg22 like FY143_11710 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY143_11710 PF05233 PHB accumulation regulatory domain FY143_11715 PF00108 Thiolase, N-terminal domain FY143_11715 PF02803 Thiolase, C-terminal domain FY143_11730 PF00210 Ferritin-like domain FY143_11735 PF00293 NUDIX domain FY143_11745 PF13180 PDZ domain FY143_11745 PF03572 Peptidase family S41 FY143_11755 PF02590 Predicted SPOUT methyltransferase FY143_11765 PF01467 Cytidylyltransferase-like FY143_11770 PF00171 Aldehyde dehydrogenase family FY143_11775 PF00696 Amino acid kinase family FY143_11775 PF01472 PUA domain FY143_11780 PF01018 GTP1/OBG FY143_11780 PF01926 50S ribosome-binding GTPase FY143_11785 PF13302 Acetyltransferase (GNAT) domain FY143_11795 PF01016 Ribosomal L27 protein FY143_11800 PF00829 Ribosomal prokaryotic L21 protein FY143_11815 PF03328 HpcH/HpaI aldolase/citrate lyase family FY143_11825 PF00694 Aconitase C-terminal domain FY143_11830 PF00180 Isocitrate/isopropylmalate dehydrogenase FY143_11835 PF03150 Di-haem cytochrome c peroxidase FY143_11840 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY143_11840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY143_11845 PF10414 Sirohaem synthase dimerisation region FY143_11845 PF14824 Sirohaem biosynthesis protein central FY143_11845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_11850 PF01888 CbiD FY143_11855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_11865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_11870 PF02571 Precorrin-6x reductase CbiJ/CobK FY143_11875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_11880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_11885 PF02570 Precorrin-8X methylmutase FY143_11890 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY143_11895 PF02514 CobN/Magnesium Chelatase FY143_11900 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY143_11900 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY143_11910 PF12557 Cob(I)alamin adenosyltransferase N terminal FY143_11910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY143_11915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY143_11915 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY143_11920 PF03186 CobD/Cbib protein FY143_11925 PF00155 Aminotransferase class I and II FY143_11930 PF13378 Enolase C-terminal domain-like FY143_11930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_11935 PF05336 L-rhamnose mutarotase FY143_11940 PF01232 Mannitol dehydrogenase Rossmann domain FY143_11940 PF08125 Mannitol dehydrogenase C-terminal domain FY143_11945 PF00107 Zinc-binding dehydrogenase FY143_11945 PF08240 Alcohol dehydrogenase GroES-like domain FY143_11955 PF00248 Aldo/keto reductase family FY143_11965 PF02653 Branched-chain amino acid transport system / permease component FY143_11970 PF00005 ABC transporter FY143_11975 PF07729 FCD domain FY143_11975 PF00392 Bacterial regulatory proteins, gntR family FY143_11980 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY143_11980 PF08666 SAF domain FY143_11985 PF02142 MGS-like domain FY143_11985 PF01808 AICARFT/IMPCHase bienzyme FY143_11995 PF01029 NusB family FY143_11995 PF01189 16S rRNA methyltransferase RsmB/F FY143_12000 PF01435 Peptidase family M48 FY143_12010 PF17762 HTH domain found in ParB protein FY143_12010 PF02195 ParB-like nuclease domain FY143_12015 PF13614 AAA domain FY143_12020 PF02527 rRNA small subunit methyltransferase G FY143_12025 PF01134 Glucose inhibited division protein A FY143_12025 PF13932 GidA associated domain FY143_12030 PF10396 GTP-binding protein TrmE N-terminus FY143_12030 PF01926 50S ribosome-binding GTPase FY143_12030 PF12631 MnmE helical domain FY143_12035 PF07498 Rho termination factor, N-terminal domain FY143_12035 PF07497 Rho termination factor, RNA-binding domain FY143_12035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY143_12040 PF03653 Uncharacterised protein family (UPF0093) FY143_12045 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY143_12050 PF03618 Kinase/pyrophosphorylase FY143_12055 PF02545 Maf-like protein FY143_12060 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY143_12060 PF01488 Shikimate / quinate 5-dehydrogenase FY143_12060 PF08501 Shikimate dehydrogenase substrate binding domain FY143_12065 PF01121 Dephospho-CoA kinase FY143_12070 PF00929 Exonuclease FY143_12075 PF02556 Preprotein translocase subunit SecB FY143_12080 PF04186 FxsA cytoplasmic membrane protein FY143_12090 PF03562 MltA specific insert domain FY143_12090 PF06725 3D domain FY143_12105 PF00204 DNA gyrase B FY143_12105 PF00986 DNA gyrase B subunit, carboxyl terminus FY143_12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_12105 PF01751 Toprim domain FY143_12115 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY143_12130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY143_12135 PF00291 Pyridoxal-phosphate dependent enzyme FY143_12140 PF00290 Tryptophan synthase alpha chain FY143_12145 PF01039 Carboxyl transferase domain FY143_12150 PF02875 Mur ligase family, glutamate ligase domain FY143_12150 PF08245 Mur ligase middle domain FY143_12155 PF00085 Thioredoxin FY143_12160 PF00580 UvrD/REP helicase N-terminal domain FY143_12160 PF13361 UvrD-like helicase C-terminal domain FY143_12160 PF12705 PD-(D/E)XK nuclease superfamily FY143_12170 PF12804 MobA-like NTP transferase domain FY143_12175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY143_12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_12180 PF00512 His Kinase A (phospho-acceptor) domain FY143_12185 PF05221 S-adenosyl-L-homocysteine hydrolase FY143_12185 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY143_12190 PF00381 PTS HPr component phosphorylation site FY143_12195 PF03830 PTS system sorbose subfamily IIB component FY143_12195 PF03610 PTS system fructose IIA component FY143_12200 PF07475 HPr Serine kinase C-terminal domain FY143_12200 PF02603 HPr Serine kinase N terminus FY143_12205 PF00672 HAMP domain FY143_12205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_12205 PF00512 His Kinase A (phospho-acceptor) domain FY143_12205 PF13755 Sensor N-terminal transmembrane domain FY143_12205 PF13756 Stimulus-sensing domain FY143_12210 PF00486 Transcriptional regulatory protein, C terminal FY143_12210 PF00072 Response regulator receiver domain FY143_12215 PF01293 Phosphoenolpyruvate carboxykinase FY143_12220 PF00472 RF-1 domain FY143_12225 PF01476 LysM domain FY143_12225 PF04972 BON domain FY143_12230 PF00485 Phosphoribulokinase / Uridine kinase family FY143_12235 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY143_12240 PF00977 Histidine biosynthesis protein FY143_12245 PF00977 Histidine biosynthesis protein FY143_12250 PF00117 Glutamine amidotransferase class-I FY143_12260 PF00475 Imidazoleglycerol-phosphate dehydratase FY143_12265 PF00227 Proteasome subunit FY143_12270 PF00004 ATPase family associated with various cellular activities (AAA) FY143_12270 PF07724 AAA domain (Cdc48 subfamily) FY143_12270 PF10431 C-terminal, D2-small domain, of ClpB protein FY143_12280 PF01274 Malate synthase FY143_12295 PF00072 Response regulator receiver domain FY143_12300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_12300 PF00512 His Kinase A (phospho-acceptor) domain FY143_12305 PF08482 ATP-dependent helicase C-terminal FY143_12305 PF04408 Helicase associated domain (HA2) FY143_12305 PF00270 DEAD/DEAH box helicase FY143_12305 PF00271 Helicase conserved C-terminal domain FY143_12340 PF00270 DEAD/DEAH box helicase FY143_12340 PF00271 Helicase conserved C-terminal domain FY143_12340 PF00570 HRDC domain FY143_12340 PF16124 RecQ zinc-binding FY143_12340 PF09382 RQC domain FY143_12345 PF00480 ROK family FY143_12350 PF13407 Periplasmic binding protein domain FY143_12355 PF02653 Branched-chain amino acid transport system / permease component FY143_12360 PF00005 ABC transporter FY143_12365 PF00485 Phosphoribulokinase / Uridine kinase family FY143_12370 PF00462 Glutaredoxin FY143_12375 PF07972 NrdI Flavodoxin like FY143_12380 PF02867 Ribonucleotide reductase, barrel domain FY143_12380 PF00317 Ribonucleotide reductase, all-alpha domain FY143_12380 PF08343 Ribonucleotide reductase N-terminal FY143_12385 PF00268 Ribonucleotide reductase, small chain FY143_12395 PF02463 RecF/RecN/SMC N terminal domain FY143_12400 PF00581 Rhodanese-like domain FY143_12400 PF00899 ThiF family FY143_12410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_12410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY143_12420 PF00294 pfkB family carbohydrate kinase FY143_12430 PF05175 Methyltransferase small domain FY143_12430 PF08468 Methyltransferase small domain N-terminal FY143_12435 PF00013 KH domain FY143_12435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY143_12435 PF01138 3' exoribonuclease family, domain 1 FY143_12435 PF03725 3' exoribonuclease family, domain 2 FY143_12435 PF00575 S1 RNA binding domain FY143_12440 PF00312 Ribosomal protein S15 FY143_12445 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY143_12445 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY143_12445 PF09157 Pseudouridine synthase II TruB, C-terminal FY143_12450 PF02033 Ribosome-binding factor A FY143_12455 PF04760 Translation initiation factor IF-2, N-terminal region FY143_12455 PF00009 Elongation factor Tu GTP binding domain FY143_12455 PF03144 Elongation factor Tu domain 2 FY143_12455 PF11987 Translation-initiation factor 2 FY143_12455 PF08364 Bacterial translation initiation factor IF-2 associated region FY143_12465 PF08529 NusA N-terminal domain FY143_12465 PF00575 S1 RNA binding domain FY143_12465 PF13184 NusA-like KH domain FY143_12470 PF17384 RimP C-terminal SH3 domain FY143_12470 PF02576 RimP N-terminal domain FY143_12475 PF05977 Transmembrane secretion effector FY143_12480 PF13406 Transglycosylase SLT domain FY143_12485 PF02132 RecR protein FY143_12485 PF13662 Toprim domain FY143_12495 PF02575 YbaB/EbfC DNA-binding family FY143_12500 PF12170 DNA polymerase III tau subunit V interacting with alpha FY143_12500 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY143_12500 PF12169 DNA polymerase III subunits gamma and tau domain III FY143_12515 PF00293 NUDIX domain FY143_12515 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY143_12515 PF09297 NADH pyrophosphatase zinc ribbon domain FY143_12520 PF01817 Chorismate mutase type II FY143_12520 PF00800 Prephenate dehydratase FY143_12525 PF02348 Cytidylyltransferase FY143_12530 PF00034 Cytochrome c FY143_12535 PF02397 Bacterial sugar transferase FY143_12540 PF00905 Penicillin binding protein transpeptidase domain FY143_12540 PF00912 Transglycosylase FY143_12545 PF04073 Aminoacyl-tRNA editing domain FY143_12550 PF00313 'Cold-shock' DNA-binding domain FY143_12555 PF01546 Peptidase family M20/M25/M40 FY143_12555 PF07687 Peptidase dimerisation domain FY143_12560 PF01047 MarR family FY143_12565 PF01367 5'-3' exonuclease, C-terminal SAM fold FY143_12565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY143_12565 PF00476 DNA polymerase family A FY143_12565 PF01612 3'-5' exonuclease FY143_12575 PF01783 Ribosomal L32p protein family FY143_12580 PF02743 Cache domain FY143_12580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_12580 PF00512 His Kinase A (phospho-acceptor) domain FY143_12585 PF02954 Bacterial regulatory protein, Fis family FY143_12585 PF00072 Response regulator receiver domain FY143_12585 PF00158 Sigma-54 interaction domain FY143_12590 PF03401 Tripartite tricarboxylate transporter family receptor FY143_12595 PF07331 Tripartite tricarboxylate transporter TctB family FY143_12600 PF01970 Tripartite tricarboxylate transporter TctA family FY143_12605 PF04102 SlyX FY143_12615 PF01556 DnaJ C terminal domain FY143_12615 PF00226 DnaJ domain FY143_12615 PF00684 DnaJ central domain FY143_12620 PF00012 Hsp70 protein FY143_12635 PF01625 Peptide methionine sulfoxide reductase FY143_12640 PF02608 ABC transporter substrate-binding protein PnrA-like FY143_12645 PF00005 ABC transporter FY143_12650 PF02653 Branched-chain amino acid transport system / permease component FY143_12655 PF02653 Branched-chain amino acid transport system / permease component FY143_12660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY143_12665 PF01048 Phosphorylase superfamily FY143_12670 PF01791 DeoC/LacD family aldolase FY143_12675 PF00591 Glycosyl transferase family, a/b domain FY143_12675 PF02885 Glycosyl transferase family, helical bundle domain FY143_12675 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY143_12690 PF00962 Adenosine/AMP deaminase FY143_12695 PF01676 Metalloenzyme superfamily FY143_12710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY143_12715 PF00510 Cytochrome c oxidase subunit III FY143_12720 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY143_12725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY143_12725 PF06481 COX Aromatic Rich Motif FY143_12730 PF07690 Major Facilitator Superfamily FY143_12730 PF00083 Sugar (and other) transporter FY143_12735 PF00310 Glutamine amidotransferases class-II FY143_12735 PF04898 Glutamate synthase central domain FY143_12735 PF01645 Conserved region in glutamate synthase FY143_12735 PF01493 GXGXG motif FY143_12740 PF00667 FAD binding domain FY143_12740 PF00258 Flavodoxin FY143_12740 PF00175 Oxidoreductase NAD-binding domain FY143_12760 PF00109 Beta-ketoacyl synthase, N-terminal domain FY143_12760 PF02801 Beta-ketoacyl synthase, C-terminal domain FY143_12765 PF07977 FabA-like domain FY143_12785 PF03458 UPF0126 domain FY143_12795 PF06912 Protein of unknown function (DUF1275) FY143_12805 PF00528 Binding-protein-dependent transport system inner membrane component FY143_12810 PF00005 ABC transporter FY143_12815 PF00392 Bacterial regulatory proteins, gntR family FY143_12815 PF07702 UTRA domain FY143_12820 PF01618 MotA/TolQ/ExbB proton channel family FY143_12825 PF02472 Biopolymer transport protein ExbD/TolR FY143_12835 PF02615 Malate/L-lactate dehydrogenase FY143_12850 PF00625 Guanylate kinase FY143_12855 PF07969 Amidohydrolase family FY143_12860 PF06299 Protein of unknown function (DUF1045) FY143_12865 PF00528 Binding-protein-dependent transport system inner membrane component FY143_12870 PF00528 Binding-protein-dependent transport system inner membrane component FY143_12880 PF00005 ABC transporter FY143_12890 PF00005 ABC transporter FY143_12895 PF00005 ABC transporter FY143_12900 PF06007 Phosphonate metabolism protein PhnJ FY143_12905 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY143_12910 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY143_12915 PF06754 Phosphonate metabolism protein PhnG FY143_12920 PF00392 Bacterial regulatory proteins, gntR family FY143_12920 PF07702 UTRA domain FY143_12925 PF05173 Dihydrodipicolinate reductase, C-terminus FY143_12925 PF01113 Dihydrodipicolinate reductase, N-terminus FY143_12930 PF02685 Glucokinase FY143_12935 PF02142 MGS-like domain FY143_12940 PF03411 Penicillin-insensitive murein endopeptidase FY143_12945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_12950 PF00528 Binding-protein-dependent transport system inner membrane component FY143_12955 PF00528 Binding-protein-dependent transport system inner membrane component FY143_12955 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_12960 PF00005 ABC transporter FY143_12960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_12965 PF01266 FAD dependent oxidoreductase FY143_12970 PF00120 Glutamine synthetase, catalytic domain FY143_12975 PF01266 FAD dependent oxidoreductase FY143_12985 PF00528 Binding-protein-dependent transport system inner membrane component FY143_12990 PF00005 ABC transporter FY143_12995 PF00528 Binding-protein-dependent transport system inner membrane component FY143_13000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY143_13010 PF02082 Transcriptional regulator FY143_13015 PF13416 Bacterial extracellular solute-binding protein FY143_13020 PF00171 Aldehyde dehydrogenase family FY143_13030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_13030 PF03466 LysR substrate binding domain FY143_13035 PF00892 EamA-like transporter family FY143_13050 PF00877 NlpC/P60 family FY143_13060 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY143_13060 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY143_13065 PF02789 Cytosol aminopeptidase family, N-terminal domain FY143_13065 PF00883 Cytosol aminopeptidase family, catalytic domain FY143_13085 PF00437 Type II/IV secretion system protein FY143_13100 PF04972 BON domain FY143_13100 PF13629 Pilus formation protein N terminal region FY143_13100 PF00263 Bacterial type II and III secretion system protein FY143_13140 PF00117 Glutamine amidotransferase class-I FY143_13145 PF07411 Domain of unknown function (DUF1508) FY143_13150 PF01183 Glycosyl hydrolases family 25 FY143_13155 PF00892 EamA-like transporter family FY143_13160 PF00155 Aminotransferase class I and II FY143_13160 PF00392 Bacterial regulatory proteins, gntR family FY143_13190 PF00679 Elongation factor G C-terminus FY143_13190 PF00009 Elongation factor Tu GTP binding domain FY143_13190 PF03144 Elongation factor Tu domain 2 FY143_13190 PF06421 GTP-binding protein LepA C-terminus FY143_13195 PF00795 Carbon-nitrogen hydrolase FY143_13225 PF02311 AraC-like ligand binding domain FY143_13225 PF12833 Helix-turn-helix domain FY143_13230 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_13255 PF05198 Translation initiation factor IF-3, N-terminal domain FY143_13255 PF00707 Translation initiation factor IF-3, C-terminal domain FY143_13260 PF01632 Ribosomal protein L35 FY143_13265 PF00453 Ribosomal protein L20 FY143_13275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY143_13275 PF01409 tRNA synthetases class II core domain (F) FY143_13280 PF03147 Ferredoxin-fold anticodon binding domain FY143_13280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY143_13280 PF01588 Putative tRNA binding domain FY143_13280 PF03484 tRNA synthetase B5 domain FY143_13280 PF03483 B3/4 domain FY143_13285 PF00248 Aldo/keto reductase family FY143_13290 PF03466 LysR substrate binding domain FY143_13290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_13300 PF00248 Aldo/keto reductase family FY143_13305 PF12833 Helix-turn-helix domain FY143_13305 PF01965 DJ-1/PfpI family FY143_13315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_13315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_13330 PF02601 Exonuclease VII, large subunit FY143_13330 PF13742 OB-fold nucleic acid binding domain FY143_13335 PF13378 Enolase C-terminal domain-like FY143_13335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_13340 PF00392 Bacterial regulatory proteins, gntR family FY143_13340 PF07729 FCD domain FY143_13345 PF01047 MarR family FY143_13350 PF00892 EamA-like transporter family FY143_13355 PF02073 Thermophilic metalloprotease (M29) FY143_13360 PF04073 Aminoacyl-tRNA editing domain FY143_13365 PF03960 ArsC family FY143_13375 PF00117 Glutamine amidotransferase class-I FY143_13375 PF00958 GMP synthase C terminal domain FY143_13390 PF03073 TspO/MBR family FY143_13415 PF01189 16S rRNA methyltransferase RsmB/F FY143_13415 PF01029 NusB family FY143_13420 PF03330 Lytic transglycolase FY143_13430 PF08331 Domain of unknown function (DUF1730) FY143_13435 PF13417 Glutathione S-transferase, N-terminal domain FY143_13435 PF00043 Glutathione S-transferase, C-terminal domain FY143_13440 PF02673 Bacitracin resistance protein BacA FY143_13455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY143_13465 PF13649 Methyltransferase domain FY143_13470 PF02768 DNA polymerase III beta subunit, C-terminal domain FY143_13470 PF02767 DNA polymerase III beta subunit, central domain FY143_13470 PF00712 DNA polymerase III beta subunit, N-terminal domain FY143_13475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_13480 PF02021 Uncharacterised protein family UPF0102 FY143_13485 PF14602 Hexapeptide repeat of succinyl-transferase FY143_13485 PF12464 Maltose acetyltransferase FY143_13490 PF13416 Bacterial extracellular solute-binding protein FY143_13495 PF00528 Binding-protein-dependent transport system inner membrane component FY143_13500 PF00528 Binding-protein-dependent transport system inner membrane component FY143_13505 PF00005 ABC transporter FY143_13515 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY143_13515 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY143_13520 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY143_13520 PF01078 Magnesium chelatase, subunit ChlI FY143_13525 PF00291 Pyridoxal-phosphate dependent enzyme FY143_13530 PF01810 LysE type translocator FY143_13535 PF00692 dUTPase FY143_13540 PF03144 Elongation factor Tu domain 2 FY143_13540 PF00009 Elongation factor Tu GTP binding domain FY143_13540 PF16658 Class II release factor RF3, C-terminal domain FY143_13545 PF02441 Flavoprotein FY143_13545 PF04127 DNA / pantothenate metabolism flavoprotein FY143_13560 PF03109 ABC1 family FY143_13565 PF01209 ubiE/COQ5 methyltransferase family FY143_13570 PF06827 Zinc finger found in FPG and IleRS FY143_13570 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY143_13570 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY143_13575 PF00378 Enoyl-CoA hydratase/isomerase FY143_13580 PF01649 Ribosomal protein S20 FY143_13590 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FY143_13675 PF13454 FAD-NAD(P)-binding FY143_13710 PF00300 Histidine phosphatase superfamily (branch 1) FY143_13720 PF13505 Outer membrane protein beta-barrel domain FY143_13730 PF00392 Bacterial regulatory proteins, gntR family FY143_13730 PF07729 FCD domain FY143_13750 PF03737 Aldolase/RraA FY143_13765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_13765 PF00005 ABC transporter FY143_13770 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_13770 PF00528 Binding-protein-dependent transport system inner membrane component FY143_13775 PF00528 Binding-protein-dependent transport system inner membrane component FY143_13780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_13800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_13800 PF03466 LysR substrate binding domain FY143_13805 PF07690 Major Facilitator Superfamily FY143_13810 PF00144 Beta-lactamase FY143_13875 PF00534 Glycosyl transferases group 1 FY143_13875 PF08323 Starch synthase catalytic domain FY143_13880 PF00128 Alpha amylase, catalytic domain FY143_13880 PF11941 Domain of unknown function (DUF3459) FY143_13880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY143_13885 PF04542 Sigma-70 region 2 FY143_13885 PF08281 Sigma-70, region 4 FY143_13915 PF05974 Domain of unknown function (DUF892) FY143_13920 PF18011 C-terminal domain found in long catalases FY143_13920 PF00199 Catalase FY143_13920 PF06628 Catalase-related immune-responsive FY143_13935 PF03358 NADPH-dependent FMN reductase FY143_13935 PF01566 Natural resistance-associated macrophage protein FY143_13995 PF17841 BID domain of Bartonella effector protein (Bep) FY143_13995 PF03389 MobA/MobL family FY143_13995 PF01443 Viral (Superfamily 1) RNA helicase FY143_14000 PF02308 MgtC family FY143_14055 PF04717 Type VI secretion system, phage-baseplate injector FY143_14055 PF06715 Gp5 C-terminal repeat (3 copies) FY143_14075 PF17871 AAA lid domain FY143_14075 PF10431 C-terminal, D2-small domain, of ClpB protein FY143_14075 PF07724 AAA domain (Cdc48 subfamily) FY143_14075 PF00004 ATPase family associated with various cellular activities (AAA) FY143_14085 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY143_14090 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY143_14110 PF05947 Type VI secretion system, TssF FY143_14125 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY143_14130 PF00691 OmpA family FY143_14135 PF14331 ImcF-related N-terminal domain FY143_14135 PF06744 Type VI secretion protein IcmF C-terminal FY143_14135 PF06761 Intracellular multiplication and human macrophage-killing FY143_14150 PF02563 Polysaccharide biosynthesis/export protein FY143_14160 PF01037 Lrp/AsnC ligand binding domain FY143_14165 PF00171 Aldehyde dehydrogenase family FY143_14170 PF00202 Aminotransferase class-III FY143_14175 PF00155 Aminotransferase class I and II FY143_14175 PF00392 Bacterial regulatory proteins, gntR family FY143_14180 PF00291 Pyridoxal-phosphate dependent enzyme FY143_14185 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY143_14190 PF00557 Metallopeptidase family M24 FY143_14190 PF01321 Creatinase/Prolidase N-terminal domain FY143_14195 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FY143_14200 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_14205 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14210 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14215 PF00005 ABC transporter FY143_14225 PF00700 Bacterial flagellin C-terminal helical region FY143_14225 PF00669 Bacterial flagellin N-terminal helical region FY143_14230 PF00700 Bacterial flagellin C-terminal helical region FY143_14230 PF00669 Bacterial flagellin N-terminal helical region FY143_14245 PF00440 Bacterial regulatory proteins, tetR family FY143_14260 PF08281 Sigma-70, region 4 FY143_14260 PF04542 Sigma-70 region 2 FY143_14270 PF00535 Glycosyl transferase family 2 FY143_14280 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_14285 PF00535 Glycosyl transferase family 2 FY143_14290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY143_14290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY143_14290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY143_14310 PF00005 ABC transporter FY143_14330 PF00535 Glycosyl transferase family 2 FY143_14335 PF05159 Capsule polysaccharide biosynthesis protein FY143_14340 PF00884 Sulfatase FY143_14345 PF00106 short chain dehydrogenase FY143_14350 PF00155 Aminotransferase class I and II FY143_14355 PF14765 Polyketide synthase dehydratase FY143_14355 PF08240 Alcohol dehydrogenase GroES-like domain FY143_14355 PF16197 Ketoacyl-synthetase C-terminal extension FY143_14355 PF00109 Beta-ketoacyl synthase, N-terminal domain FY143_14355 PF02801 Beta-ketoacyl synthase, C-terminal domain FY143_14355 PF00698 Acyl transferase domain FY143_14355 PF08659 KR domain FY143_14355 PF00550 Phosphopantetheine attachment site FY143_14370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY143_14375 PF16363 GDP-mannose 4,6 dehydratase FY143_14380 PF04321 RmlD substrate binding domain FY143_14385 PF00483 Nucleotidyl transferase FY143_14395 PF00285 Citrate synthase, C-terminal domain FY143_14400 PF00285 Citrate synthase, C-terminal domain FY143_14435 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FY143_14440 PF13302 Acetyltransferase (GNAT) domain FY143_14450 PF00563 EAL domain FY143_14450 PF01590 GAF domain FY143_14450 PF00990 Diguanylate cyclase, GGDEF domain FY143_14450 PF00360 Phytochrome region FY143_14465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_14465 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_14520 PF06628 Catalase-related immune-responsive FY143_14520 PF00199 Catalase FY143_14520 PF18011 C-terminal domain found in long catalases FY143_14530 PF00563 EAL domain FY143_14530 PF12792 CSS motif domain associated with EAL FY143_14545 PF00664 ABC transporter transmembrane region FY143_14545 PF00005 ABC transporter FY143_14555 PF03401 Tripartite tricarboxylate transporter family receptor FY143_14560 PF00196 Bacterial regulatory proteins, luxR family FY143_14560 PF00072 Response regulator receiver domain FY143_14565 PF05532 CsbD-like FY143_14585 PF00072 Response regulator receiver domain FY143_14585 PF00486 Transcriptional regulatory protein, C terminal FY143_14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_14595 PF13673 Acetyltransferase (GNAT) domain FY143_14600 PF07690 Major Facilitator Superfamily FY143_14610 PF00384 Molybdopterin oxidoreductase FY143_14610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY143_14610 PF00037 4Fe-4S binding domain FY143_14610 PF01568 Molydopterin dinucleotide binding domain FY143_14610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY143_14615 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY143_14615 PF00037 4Fe-4S binding domain FY143_14615 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY143_14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_14625 PF03466 LysR substrate binding domain FY143_14630 PF01177 Asp/Glu/Hydantoin racemase FY143_14635 PF01613 Flavin reductase like domain FY143_14640 PF00392 Bacterial regulatory proteins, gntR family FY143_14640 PF07729 FCD domain FY143_14645 PF00005 ABC transporter FY143_14645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_14650 PF00005 ABC transporter FY143_14650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_14655 PF01979 Amidohydrolase family FY143_14660 PF01979 Amidohydrolase family FY143_14665 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_14665 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14670 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_14680 PF01979 Amidohydrolase family FY143_14685 PF02530 Porin subfamily FY143_14690 PF03707 Bacterial signalling protein N terminal repeat FY143_14690 PF00563 EAL domain FY143_14690 PF00990 Diguanylate cyclase, GGDEF domain FY143_14695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY143_14695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_14700 PF00005 ABC transporter FY143_14705 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14710 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14715 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_14725 PF00356 Bacterial regulatory proteins, lacI family FY143_14730 PF05544 Proline racemase FY143_14740 PF01266 FAD dependent oxidoreductase FY143_14745 PF00005 ABC transporter FY143_14750 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14755 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14765 PF02615 Malate/L-lactate dehydrogenase FY143_14770 PF00701 Dihydrodipicolinate synthetase family FY143_14775 PF00392 Bacterial regulatory proteins, gntR family FY143_14775 PF07729 FCD domain FY143_14780 PF12327 FtsZ family, C-terminal domain FY143_14780 PF00091 Tubulin/FtsZ family, GTPase domain FY143_14785 PF00072 Response regulator receiver domain FY143_14800 PF02056 Family 4 glycosyl hydrolase FY143_14800 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY143_14805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_14805 PF00005 ABC transporter FY143_14810 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_14810 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14815 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_14825 PF02056 Family 4 glycosyl hydrolase FY143_14825 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY143_14850 PF00480 ROK family FY143_14855 PF13416 Bacterial extracellular solute-binding protein FY143_14860 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14865 PF00528 Binding-protein-dependent transport system inner membrane component FY143_14870 PF14698 Argininosuccinate lyase C-terminal FY143_14870 PF00206 Lyase FY143_14875 PF00005 ABC transporter FY143_14875 PF08402 TOBE domain FY143_14880 PF00294 pfkB family carbohydrate kinase FY143_14885 PF12411 Choline sulfatase enzyme C terminal FY143_14885 PF00884 Sulfatase FY143_14890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY143_14895 PF03466 LysR substrate binding domain FY143_14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_14900 PF00171 Aldehyde dehydrogenase family FY143_14910 PF12833 Helix-turn-helix domain FY143_14910 PF10114 Sensory domain found in PocR FY143_14925 PF01638 HxlR-like helix-turn-helix FY143_14930 PF00005 ABC transporter FY143_14935 PF01032 FecCD transport family FY143_14940 PF01032 FecCD transport family FY143_14950 PF00593 TonB dependent receptor FY143_14950 PF07715 TonB-dependent Receptor Plug Domain FY143_14955 PF12833 Helix-turn-helix domain FY143_14960 PF00141 Peroxidase FY143_14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_14965 PF03466 LysR substrate binding domain FY143_14975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_14975 PF00512 His Kinase A (phospho-acceptor) domain FY143_14975 PF00672 HAMP domain FY143_14980 PF00072 Response regulator receiver domain FY143_14980 PF00486 Transcriptional regulatory protein, C terminal FY143_14985 PF13533 Biotin-lipoyl like FY143_14990 PF00873 AcrB/AcrD/AcrF family FY143_15000 PF01865 Protein of unknown function DUF47 FY143_15005 PF01384 Phosphate transporter family FY143_15010 PF02735 Ku70/Ku80 beta-barrel domain FY143_15015 PF13298 DNA polymerase Ligase (LigD) FY143_15015 PF01068 ATP dependent DNA ligase domain FY143_15015 PF04679 ATP dependent DNA ligase C terminal region FY143_15020 PF02735 Ku70/Ku80 beta-barrel domain FY143_15035 PF13188 PAS domain FY143_15035 PF03707 Bacterial signalling protein N terminal repeat FY143_15035 PF00990 Diguanylate cyclase, GGDEF domain FY143_15035 PF00563 EAL domain FY143_15045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_15050 PF03786 D-mannonate dehydratase (UxuA) FY143_15055 PF00392 Bacterial regulatory proteins, gntR family FY143_15055 PF07729 FCD domain FY143_15060 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15065 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15065 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_15070 PF00005 ABC transporter FY143_15070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_15075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_15075 PF00005 ABC transporter FY143_15080 PF03459 TOBE domain FY143_15080 PF17912 MalK OB fold domain FY143_15080 PF00005 ABC transporter FY143_15085 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15090 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15100 PF01593 Flavin containing amine oxidoreductase FY143_15105 PF00356 Bacterial regulatory proteins, lacI family FY143_15115 PF00580 UvrD/REP helicase N-terminal domain FY143_15115 PF13361 UvrD-like helicase C-terminal domain FY143_15120 PF11799 impB/mucB/samB family C-terminal domain FY143_15120 PF00817 impB/mucB/samB family FY143_15140 PF08241 Methyltransferase domain FY143_15155 PF01370 NAD dependent epimerase/dehydratase family FY143_15160 PF00294 pfkB family carbohydrate kinase FY143_15160 PF01467 Cytidylyltransferase-like FY143_15165 PF00534 Glycosyl transferases group 1 FY143_15170 PF00005 ABC transporter FY143_15170 PF00664 ABC transporter transmembrane region FY143_15180 PF01758 Sodium Bile acid symporter family FY143_15200 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15205 PF00005 ABC transporter FY143_15205 PF08402 TOBE domain FY143_15210 PF01547 Bacterial extracellular solute-binding protein FY143_15215 PF00480 ROK family FY143_15220 PF00459 Inositol monophosphatase family FY143_15225 PF03009 Glycerophosphoryl diester phosphodiesterase family FY143_15230 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15235 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15240 PF17912 MalK OB fold domain FY143_15240 PF00005 ABC transporter FY143_15250 PF00480 ROK family FY143_15270 PF07470 Glycosyl Hydrolase Family 88 FY143_15280 PF00005 ABC transporter FY143_15280 PF08402 TOBE domain FY143_15285 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15290 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15295 PF00356 Bacterial regulatory proteins, lacI family FY143_15305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_15305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_15310 PF01261 Xylose isomerase-like TIM barrel FY143_15315 PF13407 Periplasmic binding protein domain FY143_15320 PF00356 Bacterial regulatory proteins, lacI family FY143_15325 PF00108 Thiolase, N-terminal domain FY143_15325 PF02803 Thiolase, C-terminal domain FY143_15330 PF01144 Coenzyme A transferase FY143_15335 PF01144 Coenzyme A transferase FY143_15340 PF01614 Bacterial transcriptional regulator FY143_15340 PF09339 IclR helix-turn-helix domain FY143_15350 PF01494 FAD binding domain FY143_15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_15355 PF03466 LysR substrate binding domain FY143_15365 PF02627 Carboxymuconolactone decarboxylase family FY143_15370 PF00775 Dioxygenase FY143_15370 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY143_15375 PF00775 Dioxygenase FY143_15380 PF00206 Lyase FY143_15380 PF10397 Adenylosuccinate lyase C-terminus FY143_15385 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15390 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15395 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_15400 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_15405 PF00005 ABC transporter FY143_15410 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY143_15410 PF08501 Shikimate dehydrogenase substrate binding domain FY143_15415 PF01220 Dehydroquinase class II FY143_15425 PF01261 Xylose isomerase-like TIM barrel FY143_15425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_15435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_15435 PF00005 ABC transporter FY143_15440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_15445 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15450 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_15450 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15465 PF13458 Periplasmic binding protein FY143_15480 PF00005 ABC transporter FY143_15480 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY143_15485 PF00005 ABC transporter FY143_15485 PF08402 TOBE domain FY143_15495 PF00294 pfkB family carbohydrate kinase FY143_15500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY143_15500 PF00205 Thiamine pyrophosphate enzyme, central domain FY143_15500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY143_15505 PF01261 Xylose isomerase-like TIM barrel FY143_15510 PF04962 KduI/IolB family FY143_15515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_15515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_15520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY143_15520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_15525 PF00356 Bacterial regulatory proteins, lacI family FY143_15530 PF01047 MarR family FY143_15535 PF02633 Creatinine amidohydrolase FY143_15540 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY143_15540 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY143_15555 PF13505 Outer membrane protein beta-barrel domain FY143_15575 PF03824 High-affinity nickel-transport protein FY143_15595 PF01081 KDPG and KHG aldolase FY143_15600 PF01928 CYTH domain FY143_15610 PF00581 Rhodanese-like domain FY143_15610 PF17773 UPF0176 acylphosphatase like domain FY143_15615 PF00990 Diguanylate cyclase, GGDEF domain FY143_15615 PF13188 PAS domain FY143_15615 PF03707 Bacterial signalling protein N terminal repeat FY143_15615 PF00563 EAL domain FY143_15620 PF03180 NLPA lipoprotein FY143_15625 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15630 PF00005 ABC transporter FY143_15630 PF09383 NIL domain FY143_15635 PF00881 Nitroreductase family FY143_15640 PF00232 Glycosyl hydrolase family 1 FY143_15645 PF01261 Xylose isomerase-like TIM barrel FY143_15650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY143_15650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY143_15655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY143_15655 PF00356 Bacterial regulatory proteins, lacI family FY143_15660 PF07690 Major Facilitator Superfamily FY143_15665 PF13533 Biotin-lipoyl like FY143_15670 PF00440 Bacterial regulatory proteins, tetR family FY143_15675 PF03741 Integral membrane protein TerC family FY143_15675 PF03471 Transporter associated domain FY143_15680 PF03600 Citrate transporter FY143_15680 PF02080 TrkA-C domain FY143_15685 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY143_15690 PF00152 tRNA synthetases class II (D, K and N) FY143_15690 PF01336 OB-fold nucleic acid binding domain FY143_15700 PF01297 Zinc-uptake complex component A periplasmic FY143_15705 PF00005 ABC transporter FY143_15710 PF00950 ABC 3 transport family FY143_15715 PF00950 ABC 3 transport family FY143_15720 PF07043 Protein of unknown function (DUF1328) FY143_15730 PF09339 IclR helix-turn-helix domain FY143_15730 PF01614 Bacterial transcriptional regulator FY143_15735 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY143_15740 PF04198 Putative sugar-binding domain FY143_15740 PF13936 Helix-turn-helix domain FY143_15745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY143_15745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY143_15755 PF00730 HhH-GPD superfamily base excision DNA repair protein FY143_15755 PF10576 Iron-sulfur binding domain of endonuclease III FY143_15755 PF00633 Helix-hairpin-helix motif FY143_15765 PF01380 SIS domain FY143_15765 PF01418 Helix-turn-helix domain, rpiR family FY143_15770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY143_15770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY143_15775 PF13419 Haloacid dehalogenase-like hydrolase FY143_15780 PF01232 Mannitol dehydrogenase Rossmann domain FY143_15780 PF08125 Mannitol dehydrogenase C-terminal domain FY143_15785 PF00005 ABC transporter FY143_15785 PF08402 TOBE domain FY143_15790 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15795 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15805 PF04198 Putative sugar-binding domain FY143_15810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_15810 PF00005 ABC transporter FY143_15815 PF01546 Peptidase family M20/M25/M40 FY143_15815 PF07687 Peptidase dimerisation domain FY143_15820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_15825 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15830 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15830 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_15840 PF01965 DJ-1/PfpI family FY143_15845 PF01425 Amidase FY143_15850 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_15850 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15855 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_15865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_15865 PF03466 LysR substrate binding domain FY143_15870 PF00005 ABC transporter FY143_15870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_15875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_15875 PF00005 ABC transporter FY143_15880 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15880 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_15885 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_15895 PF01244 Membrane dipeptidase (Peptidase family M19) FY143_15900 PF00156 Phosphoribosyl transferase domain FY143_15905 PF07687 Peptidase dimerisation domain FY143_15905 PF01546 Peptidase family M20/M25/M40 FY143_15910 PF07690 Major Facilitator Superfamily FY143_15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_15915 PF03466 LysR substrate binding domain FY143_15920 PF01979 Amidohydrolase family FY143_15920 PF13382 Adenine deaminase C-terminal domain FY143_15930 PF00005 ABC transporter FY143_15930 PF08402 TOBE domain FY143_15940 PF00528 Binding-protein-dependent transport system inner membrane component FY143_15950 PF00356 Bacterial regulatory proteins, lacI family FY143_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_15955 PF03466 LysR substrate binding domain FY143_15960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_15960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY143_15960 PF02770 Acyl-CoA dehydrogenase, middle domain FY143_15965 PF07715 TonB-dependent Receptor Plug Domain FY143_15975 PF00296 Luciferase-like monooxygenase FY143_15980 PF00005 ABC transporter FY143_15985 PF01032 FecCD transport family FY143_15990 PF01032 FecCD transport family FY143_16000 PF04954 Siderophore-interacting protein FY143_16000 PF08021 Siderophore-interacting FAD-binding domain FY143_16010 PF00975 Thioesterase domain FY143_16010 PF13193 AMP-binding enzyme C-terminal domain FY143_16010 PF00501 AMP-binding enzyme FY143_16010 PF00668 Condensation domain FY143_16010 PF00550 Phosphopantetheine attachment site FY143_16015 PF00501 AMP-binding enzyme FY143_16015 PF00668 Condensation domain FY143_16015 PF00550 Phosphopantetheine attachment site FY143_16015 PF00975 Thioesterase domain FY143_16020 PF00501 AMP-binding enzyme FY143_16020 PF13193 AMP-binding enzyme C-terminal domain FY143_16020 PF00668 Condensation domain FY143_16020 PF00550 Phosphopantetheine attachment site FY143_16025 PF00425 chorismate binding enzyme FY143_16030 PF00501 AMP-binding enzyme FY143_16030 PF13193 AMP-binding enzyme C-terminal domain FY143_16035 PF00857 Isochorismatase family FY143_16035 PF00550 Phosphopantetheine attachment site FY143_16045 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY143_16045 PF01648 4'-phosphopantetheinyl transferase superfamily FY143_16060 PF00916 Sulfate permease family FY143_16060 PF01740 STAS domain FY143_16070 PF00924 Mechanosensitive ion channel FY143_16075 PF00551 Formyl transferase FY143_16080 PF00464 Serine hydroxymethyltransferase FY143_16090 PF01571 Aminomethyltransferase folate-binding domain FY143_16090 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY143_16090 PF17806 Sarcosine oxidase A3 domain FY143_16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_16100 PF01266 FAD dependent oxidoreductase FY143_16115 PF00356 Bacterial regulatory proteins, lacI family FY143_16120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_16120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_16125 PF01261 Xylose isomerase-like TIM barrel FY143_16130 PF13416 Bacterial extracellular solute-binding protein FY143_16135 PF00528 Binding-protein-dependent transport system inner membrane component FY143_16140 PF00528 Binding-protein-dependent transport system inner membrane component FY143_16145 PF00005 ABC transporter FY143_16145 PF17912 MalK OB fold domain FY143_16145 PF03459 TOBE domain FY143_16160 PF03471 Transporter associated domain FY143_16160 PF03741 Integral membrane protein TerC family FY143_16170 PF00459 Inositol monophosphatase family FY143_16190 PF00005 ABC transporter FY143_16190 PF08402 TOBE domain FY143_16195 PF00528 Binding-protein-dependent transport system inner membrane component FY143_16200 PF00356 Bacterial regulatory proteins, lacI family FY143_16205 PF02690 Na+/Pi-cotransporter FY143_16220 PF00459 Inositol monophosphatase family FY143_16230 PF00083 Sugar (and other) transporter FY143_16230 PF08946 Osmosensory transporter coiled coil FY143_16240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY143_16240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY143_16245 PF00106 short chain dehydrogenase FY143_16250 PF02653 Branched-chain amino acid transport system / permease component FY143_16255 PF00005 ABC transporter FY143_16260 PF13407 Periplasmic binding protein domain FY143_16265 PF12833 Helix-turn-helix domain FY143_16270 PF00107 Zinc-binding dehydrogenase FY143_16270 PF08240 Alcohol dehydrogenase GroES-like domain FY143_16275 PF00440 Bacterial regulatory proteins, tetR family FY143_16290 PF00248 Aldo/keto reductase family FY143_16295 PF03786 D-mannonate dehydratase (UxuA) FY143_16300 PF08125 Mannitol dehydrogenase C-terminal domain FY143_16300 PF01232 Mannitol dehydrogenase Rossmann domain FY143_16310 PF00392 Bacterial regulatory proteins, gntR family FY143_16310 PF07729 FCD domain FY143_16320 PF02653 Branched-chain amino acid transport system / permease component FY143_16325 PF02653 Branched-chain amino acid transport system / permease component FY143_16330 PF00005 ABC transporter FY143_16335 PF12833 Helix-turn-helix domain FY143_16335 PF01965 DJ-1/PfpI family FY143_16340 PF01266 FAD dependent oxidoreductase FY143_16345 PF04267 Sarcosine oxidase, delta subunit family FY143_16350 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY143_16350 PF17806 Sarcosine oxidase A3 domain FY143_16350 PF01571 Aminomethyltransferase folate-binding domain FY143_16350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_16370 PF02540 NAD synthase FY143_16375 PF00501 AMP-binding enzyme FY143_16375 PF13193 AMP-binding enzyme C-terminal domain FY143_16385 PF13537 Glutamine amidotransferase domain FY143_16385 PF00733 Asparagine synthase FY143_16395 PF11791 Aconitate B N-terminal domain FY143_16395 PF06434 Aconitate hydratase 2 N-terminus FY143_16395 PF00330 Aconitase family (aconitate hydratase) FY143_16400 PF02469 Fasciclin domain FY143_16405 PF01546 Peptidase family M20/M25/M40 FY143_16405 PF07687 Peptidase dimerisation domain FY143_16415 PF00294 pfkB family carbohydrate kinase FY143_16425 PF02126 Phosphotriesterase family FY143_16430 PF02653 Branched-chain amino acid transport system / permease component FY143_16435 PF00005 ABC transporter FY143_16445 PF00356 Bacterial regulatory proteins, lacI family FY143_16460 PF00563 EAL domain FY143_16460 PF00990 Diguanylate cyclase, GGDEF domain FY143_16460 PF13188 PAS domain FY143_16460 PF03707 Bacterial signalling protein N terminal repeat FY143_16470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_16470 PF00672 HAMP domain FY143_16470 PF02203 Tar ligand binding domain homologue FY143_16475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_16480 PF00528 Binding-protein-dependent transport system inner membrane component FY143_16485 PF00528 Binding-protein-dependent transport system inner membrane component FY143_16485 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_16490 PF00005 ABC transporter FY143_16490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_16510 PF00221 Aromatic amino acid lyase FY143_16515 PF07702 UTRA domain FY143_16515 PF00392 Bacterial regulatory proteins, gntR family FY143_16530 PF00528 Binding-protein-dependent transport system inner membrane component FY143_16535 PF00005 ABC transporter FY143_16535 PF00571 CBS domain FY143_16540 PF00313 'Cold-shock' DNA-binding domain FY143_16545 PF00563 EAL domain FY143_16545 PF00990 Diguanylate cyclase, GGDEF domain FY143_16545 PF03707 Bacterial signalling protein N terminal repeat FY143_16550 PF01965 DJ-1/PfpI family FY143_16560 PF00132 Bacterial transferase hexapeptide (six repeats) FY143_16560 PF12804 MobA-like NTP transferase domain FY143_16565 PF02625 XdhC and CoxI family FY143_16565 PF13478 XdhC Rossmann domain FY143_16570 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY143_16570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY143_16575 PF03450 CO dehydrogenase flavoprotein C-terminal domain FY143_16575 PF00941 FAD binding domain in molybdopterin dehydrogenase FY143_16580 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY143_16580 PF00111 2Fe-2S iron-sulfur cluster binding domain FY143_16580 PF01799 [2Fe-2S] binding domain FY143_16600 PF07969 Amidohydrolase family FY143_16615 PF03466 LysR substrate binding domain FY143_16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_16620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_16625 PF03466 LysR substrate binding domain FY143_16630 PF04752 ChaC-like protein FY143_16635 PF00561 alpha/beta hydrolase fold FY143_16645 PF01047 MarR family FY143_16660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_16660 PF03466 LysR substrate binding domain FY143_16665 PF00561 alpha/beta hydrolase fold FY143_16670 PF00210 Ferritin-like domain FY143_16675 PF00190 Cupin FY143_16680 PF13426 PAS domain FY143_16680 PF00072 Response regulator receiver domain FY143_16680 PF08448 PAS fold FY143_16680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_16680 PF00512 His Kinase A (phospho-acceptor) domain FY143_16685 PF00196 Bacterial regulatory proteins, luxR family FY143_16685 PF00072 Response regulator receiver domain FY143_16690 PF00072 Response regulator receiver domain FY143_16690 PF00196 Bacterial regulatory proteins, luxR family FY143_16700 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_16705 PF01494 FAD binding domain FY143_16710 PF07690 Major Facilitator Superfamily FY143_16715 PF00384 Molybdopterin oxidoreductase FY143_16725 PF08240 Alcohol dehydrogenase GroES-like domain FY143_16725 PF00107 Zinc-binding dehydrogenase FY143_16730 PF00106 short chain dehydrogenase FY143_16735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_16740 PF00106 short chain dehydrogenase FY143_16745 PF00440 Bacterial regulatory proteins, tetR family FY143_16755 PF00873 AcrB/AcrD/AcrF family FY143_16770 PF02801 Beta-ketoacyl synthase, C-terminal domain FY143_16770 PF00109 Beta-ketoacyl synthase, N-terminal domain FY143_16775 PF00091 Tubulin/FtsZ family, GTPase domain FY143_16775 PF12327 FtsZ family, C-terminal domain FY143_16815 PF01464 Transglycosylase SLT domain FY143_16815 PF10145 Phage-related minor tail protein FY143_16815 PF01551 Peptidase family M23 FY143_16820 PF02861 Clp amino terminal domain, pathogenicity island component FY143_16820 PF00004 ATPase family associated with various cellular activities (AAA) FY143_16820 PF17871 AAA lid domain FY143_16820 PF10431 C-terminal, D2-small domain, of ClpB protein FY143_16820 PF07724 AAA domain (Cdc48 subfamily) FY143_16830 PF05175 Methyltransferase small domain FY143_16830 PF17827 PrmC N-terminal domain FY143_16835 PF00472 RF-1 domain FY143_16835 PF03462 PCRF domain FY143_16840 PF01590 GAF domain FY143_16840 PF02896 PEP-utilising enzyme, TIM barrel domain FY143_16840 PF00391 PEP-utilising enzyme, mobile domain FY143_16840 PF05524 PEP-utilising enzyme, N-terminal FY143_16845 PF13840 ACT domain FY143_16845 PF00696 Amino acid kinase family FY143_16845 PF01842 ACT domain FY143_16850 PF00270 DEAD/DEAH box helicase FY143_16850 PF00271 Helicase conserved C-terminal domain FY143_16855 PF03435 Saccharopine dehydrogenase NADP binding domain FY143_16855 PF16653 Saccharopine dehydrogenase C-terminal domain FY143_16860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY143_16875 PF16363 GDP-mannose 4,6 dehydratase FY143_16885 PF07536 HWE histidine kinase FY143_16885 PF13426 PAS domain FY143_16890 PF07536 HWE histidine kinase FY143_16890 PF13426 PAS domain FY143_16890 PF08447 PAS fold FY143_16895 PF00072 Response regulator receiver domain FY143_16905 PF08281 Sigma-70, region 4 FY143_16905 PF04542 Sigma-70 region 2 FY143_16910 PF01037 Lrp/AsnC ligand binding domain FY143_16915 PF14850 DNA-binding domain of Proline dehydrogenase FY143_16915 PF01619 Proline dehydrogenase FY143_16915 PF00171 Aldehyde dehydrogenase family FY143_16915 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY143_16920 PF00005 ABC transporter FY143_16925 PF00528 Binding-protein-dependent transport system inner membrane component FY143_16930 PF09084 NMT1/THI5 like FY143_16935 PF00171 Aldehyde dehydrogenase family FY143_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_16940 PF03466 LysR substrate binding domain FY143_16945 PF13409 Glutathione S-transferase, N-terminal domain FY143_16955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY143_16955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY143_16955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY143_16960 PF16363 GDP-mannose 4,6 dehydratase FY143_16965 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY143_16965 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY143_16990 PF01965 DJ-1/PfpI family FY143_17000 PF05974 Domain of unknown function (DUF892) FY143_17005 PF01011 PQQ enzyme repeat FY143_17030 PF13193 AMP-binding enzyme C-terminal domain FY143_17030 PF00501 AMP-binding enzyme FY143_17035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY143_17035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY143_17040 PF00732 GMC oxidoreductase FY143_17040 PF05199 GMC oxidoreductase FY143_17045 PF02653 Branched-chain amino acid transport system / permease component FY143_17045 PF11862 Domain of unknown function (DUF3382) FY143_17050 PF02653 Branched-chain amino acid transport system / permease component FY143_17055 PF00005 ABC transporter FY143_17060 PF00005 ABC transporter FY143_17060 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY143_17075 PF00296 Luciferase-like monooxygenase FY143_17080 PF13378 Enolase C-terminal domain-like FY143_17080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_17085 PF07729 FCD domain FY143_17085 PF00392 Bacterial regulatory proteins, gntR family FY143_17090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_17090 PF00005 ABC transporter FY143_17095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_17095 PF00005 ABC transporter FY143_17100 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17100 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_17105 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_17115 PF01321 Creatinase/Prolidase N-terminal domain FY143_17115 PF00557 Metallopeptidase family M24 FY143_17120 PF00106 short chain dehydrogenase FY143_17150 PF00575 S1 RNA binding domain FY143_17155 PF02224 Cytidylate kinase FY143_17185 PF02445 Quinolinate synthetase A protein FY143_17190 PF00890 FAD binding domain FY143_17190 PF02910 Fumarate reductase flavoprotein C-term FY143_17195 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY143_17195 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY143_17215 PF08173 Membrane bound YbgT-like protein FY143_17220 PF02322 Cytochrome bd terminal oxidase subunit II FY143_17225 PF01654 Cytochrome bd terminal oxidase subunit I FY143_17230 PF00664 ABC transporter transmembrane region FY143_17230 PF00005 ABC transporter FY143_17235 PF00005 ABC transporter FY143_17235 PF00664 ABC transporter transmembrane region FY143_17245 PF08240 Alcohol dehydrogenase GroES-like domain FY143_17245 PF00107 Zinc-binding dehydrogenase FY143_17255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY143_17255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY143_17265 PF01037 Lrp/AsnC ligand binding domain FY143_17270 PF01177 Asp/Glu/Hydantoin racemase FY143_17285 PF00343 Carbohydrate phosphorylase FY143_17290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY143_17290 PF02806 Alpha amylase, C-terminal all-beta domain FY143_17290 PF00128 Alpha amylase, catalytic domain FY143_17295 PF00483 Nucleotidyl transferase FY143_17300 PF08323 Starch synthase catalytic domain FY143_17300 PF00534 Glycosyl transferases group 1 FY143_17305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY143_17305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY143_17305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY143_17305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY143_17310 PF00128 Alpha amylase, catalytic domain FY143_17310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY143_17310 PF18390 Glycogen debranching enzyme C-terminal domain FY143_17315 PF01575 MaoC like domain FY143_17335 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY143_17335 PF17806 Sarcosine oxidase A3 domain FY143_17335 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_17335 PF01571 Aminomethyltransferase folate-binding domain FY143_17350 PF01266 FAD dependent oxidoreductase FY143_17355 PF01165 Ribosomal protein S21 FY143_17370 PF11089 Exopolysaccharide production repressor FY143_17375 PF00535 Glycosyl transferase family 2 FY143_17380 PF04230 Polysaccharide pyruvyl transferase FY143_17385 PF00535 Glycosyl transferase family 2 FY143_17390 PF01943 Polysaccharide biosynthesis protein FY143_17395 PF01757 Acyltransferase family FY143_17400 PF00722 Glycosyl hydrolases family 16 FY143_17410 PF00535 Glycosyl transferase family 2 FY143_17415 PF00535 Glycosyl transferase family 2 FY143_17420 PF00535 Glycosyl transferase family 2 FY143_17425 PF00483 Nucleotidyl transferase FY143_17430 PF02706 Chain length determinant protein FY143_17430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY143_17430 PF13807 G-rich domain on putative tyrosine kinase FY143_17435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_17440 PF13426 PAS domain FY143_17440 PF00072 Response regulator receiver domain FY143_17440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_17450 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17455 PF00005 ABC transporter FY143_17455 PF00571 CBS domain FY143_17460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_17460 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_17465 PF01205 Uncharacterized protein family UPF0029 FY143_17470 PF00849 RNA pseudouridylate synthase FY143_17475 PF04445 Putative SAM-dependent methyltransferase FY143_17485 PF07995 Glucose / Sorbosone dehydrogenase FY143_17495 PF00196 Bacterial regulatory proteins, luxR family FY143_17495 PF00072 Response regulator receiver domain FY143_17500 PF07730 Histidine kinase FY143_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_17505 PF13407 Periplasmic binding protein domain FY143_17510 PF00005 ABC transporter FY143_17515 PF02653 Branched-chain amino acid transport system / permease component FY143_17525 PF08450 SMP-30/Gluconolactonase/LRE-like region FY143_17530 PF02631 RecX family FY143_17545 PF00005 ABC transporter FY143_17550 PF01032 FecCD transport family FY143_17560 PF07715 TonB-dependent Receptor Plug Domain FY143_17560 PF00593 TonB dependent receptor FY143_17565 PF03466 LysR substrate binding domain FY143_17565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_17575 PF00884 Sulfatase FY143_17575 PF08019 Phosphoethanolamine transferase EptA/EptB FY143_17580 PF00072 Response regulator receiver domain FY143_17580 PF00486 Transcriptional regulatory protein, C terminal FY143_17585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_17585 PF00512 His Kinase A (phospho-acceptor) domain FY143_17590 PF00083 Sugar (and other) transporter FY143_17595 PF07756 Protein of unknown function (DUF1612) FY143_17595 PF11972 HTH DNA binding domain FY143_17605 PF00211 Adenylate and Guanylate cyclase catalytic domain FY143_17615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_17615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_17620 PF00892 EamA-like transporter family FY143_17625 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY143_17630 PF00491 Arginase family FY143_17645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY143_17645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY143_17650 PF00202 Aminotransferase class-III FY143_17660 PF00155 Aminotransferase class I and II FY143_17665 PF04055 Radical SAM superfamily FY143_17665 PF06968 Biotin and Thiamin Synthesis associated domain FY143_17670 PF13673 Acetyltransferase (GNAT) domain FY143_17715 PF01569 PAP2 superfamily FY143_17720 PF00072 Response regulator receiver domain FY143_17720 PF00486 Transcriptional regulatory protein, C terminal FY143_17725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_17725 PF00512 His Kinase A (phospho-acceptor) domain FY143_17725 PF00672 HAMP domain FY143_17740 PF01323 DSBA-like thioredoxin domain FY143_17745 PF01565 FAD binding domain FY143_17745 PF02913 FAD linked oxidases, C-terminal domain FY143_17750 PF01568 Molydopterin dinucleotide binding domain FY143_17750 PF00384 Molybdopterin oxidoreductase FY143_17755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_17760 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17765 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_17770 PF00005 ABC transporter FY143_17780 PF00296 Luciferase-like monooxygenase FY143_17785 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY143_17790 PF07690 Major Facilitator Superfamily FY143_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_17795 PF03466 LysR substrate binding domain FY143_17800 PF01494 FAD binding domain FY143_17810 PF02567 Phenazine biosynthesis-like protein FY143_17815 PF00293 NUDIX domain FY143_17825 PF07729 FCD domain FY143_17825 PF00392 Bacterial regulatory proteins, gntR family FY143_17830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_17830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_17835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_17835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_17840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_17840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_17850 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17855 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17860 PF17912 MalK OB fold domain FY143_17860 PF00005 ABC transporter FY143_17865 PF00920 Dehydratase family FY143_17870 PF01370 NAD dependent epimerase/dehydratase family FY143_17875 PF03737 Aldolase/RraA FY143_17885 PF01758 Sodium Bile acid symporter family FY143_17890 PF03960 ArsC family FY143_17895 PF03358 NADPH-dependent FMN reductase FY143_17910 PF03466 LysR substrate binding domain FY143_17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_17915 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_17920 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17925 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17930 PF00005 ABC transporter FY143_17935 PF00491 Arginase family FY143_17940 PF03737 Aldolase/RraA FY143_17945 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_17950 PF00005 ABC transporter FY143_17955 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17960 PF00528 Binding-protein-dependent transport system inner membrane component FY143_17965 PF00106 short chain dehydrogenase FY143_17970 PF03466 LysR substrate binding domain FY143_17970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_17975 PF00155 Aminotransferase class I and II FY143_17980 PF03746 LamB/YcsF family FY143_17985 PF02626 Carboxyltransferase domain, subdomain A and B FY143_18000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_18000 PF00289 Biotin carboxylase, N-terminal domain FY143_18000 PF02785 Biotin carboxylase C-terminal domain FY143_18005 PF00364 Biotin-requiring enzyme FY143_18040 PF07702 UTRA domain FY143_18040 PF00392 Bacterial regulatory proteins, gntR family FY143_18045 PF01979 Amidohydrolase family FY143_18050 PF01979 Amidohydrolase family FY143_18055 PF00221 Aromatic amino acid lyase FY143_18065 PF17392 Urocanase C-terminal domain FY143_18065 PF01175 Urocanase Rossmann-like domain FY143_18065 PF17391 Urocanase N-terminal domain FY143_18070 PF12697 Alpha/beta hydrolase family FY143_18075 PF05962 HutD FY143_18080 PF07364 Metallopeptidase family M81 FY143_18080 PF07171 MlrC C-terminus FY143_18085 PF14031 Putative serine dehydratase domain FY143_18085 PF01168 Alanine racemase, N-terminal domain FY143_18090 PF01042 Endoribonuclease L-PSP FY143_18100 PF13614 AAA domain FY143_18105 PF07506 RepB plasmid partitioning protein FY143_18105 PF02195 ParB-like nuclease domain FY143_18110 PF11800 Replication protein C C-terminal region FY143_18110 PF03428 Replication protein C N-terminal domain FY143_18125 PF06772 Bacterial low temperature requirement A protein (LtrA) FY143_18130 PF02885 Glycosyl transferase family, helical bundle domain FY143_18130 PF00591 Glycosyl transferase family, a/b domain FY143_18135 PF07715 TonB-dependent Receptor Plug Domain FY143_18135 PF00593 TonB dependent receptor FY143_18140 PF09278 MerR, DNA binding FY143_18140 PF00376 MerR family regulatory protein FY143_18145 PF02806 Alpha amylase, C-terminal all-beta domain FY143_18145 PF00128 Alpha amylase, catalytic domain FY143_18150 PF00289 Biotin carboxylase, N-terminal domain FY143_18150 PF02785 Biotin carboxylase C-terminal domain FY143_18150 PF00364 Biotin-requiring enzyme FY143_18150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_18155 PF02682 Carboxyltransferase domain, subdomain C and D FY143_18160 PF07286 Protein of unknown function (DUF1445) FY143_18165 PF03746 LamB/YcsF family FY143_18170 PF01566 Natural resistance-associated macrophage protein FY143_18175 PF07729 FCD domain FY143_18175 PF00392 Bacterial regulatory proteins, gntR family FY143_18180 PF08376 Nitrate and nitrite sensing FY143_18180 PF03861 ANTAR domain FY143_18195 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18200 PF00005 ABC transporter FY143_18205 PF04324 BFD-like [2Fe-2S] binding domain FY143_18205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY143_18205 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY143_18205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY143_18205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_18215 PF00384 Molybdopterin oxidoreductase FY143_18215 PF04324 BFD-like [2Fe-2S] binding domain FY143_18215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY143_18215 PF01568 Molydopterin dinucleotide binding domain FY143_18220 PF10414 Sirohaem synthase dimerisation region FY143_18220 PF14824 Sirohaem biosynthesis protein central FY143_18220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY143_18225 PF08220 DeoR-like helix-turn-helix domain FY143_18225 PF00455 DeoR C terminal sensor domain FY143_18230 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY143_18230 PF01266 FAD dependent oxidoreductase FY143_18235 PF00005 ABC transporter FY143_18235 PF08402 TOBE domain FY143_18240 PF00005 ABC transporter FY143_18240 PF17912 MalK OB fold domain FY143_18245 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18250 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY143_18265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY143_18275 PF13593 SBF-like CPA transporter family (DUF4137) FY143_18280 PF00011 Hsp20/alpha crystallin family FY143_18290 PF00459 Inositol monophosphatase family FY143_18300 PF00072 Response regulator receiver domain FY143_18310 PF13407 Periplasmic binding protein domain FY143_18315 PF00005 ABC transporter FY143_18320 PF02653 Branched-chain amino acid transport system / permease component FY143_18330 PF00248 Aldo/keto reductase family FY143_18335 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY143_18335 PF01266 FAD dependent oxidoreductase FY143_18340 PF01791 DeoC/LacD family aldolase FY143_18345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY143_18345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY143_18350 PF00672 HAMP domain FY143_18350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_18355 PF01047 MarR family FY143_18360 PF01070 FMN-dependent dehydrogenase FY143_18365 PF00005 ABC transporter FY143_18365 PF12848 ABC transporter FY143_18375 PF08379 Bacterial transglutaminase-like N-terminal region FY143_18375 PF01841 Transglutaminase-like superfamily FY143_18380 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY143_18380 PF14403 Circularly permuted ATP-grasp type 2 FY143_18405 PF03061 Thioesterase superfamily FY143_18425 PF07729 FCD domain FY143_18425 PF00392 Bacterial regulatory proteins, gntR family FY143_18430 PF00465 Iron-containing alcohol dehydrogenase FY143_18435 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY143_18445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_18450 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18455 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_18455 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18460 PF00005 ABC transporter FY143_18460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_18465 PF00701 Dihydrodipicolinate synthetase family FY143_18490 PF01493 GXGXG motif FY143_18495 PF01645 Conserved region in glutamate synthase FY143_18500 PF00120 Glutamine synthetase, catalytic domain FY143_18505 PF00551 Formyl transferase FY143_18510 PF07729 FCD domain FY143_18510 PF00392 Bacterial regulatory proteins, gntR family FY143_18520 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18525 PF00005 ABC transporter FY143_18530 PF00465 Iron-containing alcohol dehydrogenase FY143_18540 PF12697 Alpha/beta hydrolase family FY143_18545 PF01613 Flavin reductase like domain FY143_18550 PF00296 Luciferase-like monooxygenase FY143_18555 PF00171 Aldehyde dehydrogenase family FY143_18570 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18575 PF00528 Binding-protein-dependent transport system inner membrane component FY143_18580 PF00005 ABC transporter FY143_18580 PF08402 TOBE domain FY143_18585 PF00171 Aldehyde dehydrogenase family FY143_18600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_18600 PF03466 LysR substrate binding domain FY143_18620 PF00487 Fatty acid desaturase FY143_18625 PF00440 Bacterial regulatory proteins, tetR family FY143_18625 PF13977 BetI-type transcriptional repressor, C-terminal FY143_18630 PF13533 Biotin-lipoyl like FY143_18640 PF00873 AcrB/AcrD/AcrF family FY143_18645 PF07729 FCD domain FY143_18645 PF00392 Bacterial regulatory proteins, gntR family FY143_18650 PF00206 Lyase FY143_18650 PF10415 Fumarase C C-terminus FY143_18655 PF00324 Amino acid permease FY143_18660 PF17763 Glutaminase/Asparaginase C-terminal domain FY143_18660 PF00710 Asparaginase, N-terminal FY143_18670 PF03814 Potassium-transporting ATPase A subunit FY143_18680 PF02669 K+-transporting ATPase, c chain FY143_18685 PF02702 Osmosensitive K+ channel His kinase sensor domain FY143_18685 PF13492 GAF domain FY143_18685 PF13493 Domain of unknown function (DUF4118) FY143_18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_18685 PF00512 His Kinase A (phospho-acceptor) domain FY143_18690 PF00072 Response regulator receiver domain FY143_18690 PF00486 Transcriptional regulatory protein, C terminal FY143_18695 PF01212 Beta-eliminating lyase FY143_18700 PF00310 Glutamine amidotransferases class-II FY143_18700 PF04898 Glutamate synthase central domain FY143_18700 PF01645 Conserved region in glutamate synthase FY143_18700 PF01493 GXGXG motif FY143_18710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY143_18710 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_18715 PF00512 His Kinase A (phospho-acceptor) domain FY143_18715 PF00672 HAMP domain FY143_18720 PF00072 Response regulator receiver domain FY143_18720 PF00486 Transcriptional regulatory protein, C terminal FY143_18730 PF13406 Transglycosylase SLT domain FY143_18735 PF00483 Nucleotidyl transferase FY143_18750 PF00571 CBS domain FY143_18750 PF01380 SIS domain FY143_18760 PF01145 SPFH domain / Band 7 family FY143_18760 PF16200 C-terminal region of band_7 FY143_18765 PF00762 Ferrochelatase FY143_18770 PF00149 Calcineurin-like phosphoesterase FY143_18770 PF02872 5'-nucleotidase, C-terminal domain FY143_18780 PF16653 Saccharopine dehydrogenase C-terminal domain FY143_18780 PF03435 Saccharopine dehydrogenase NADP binding domain FY143_18785 PF00990 Diguanylate cyclase, GGDEF domain FY143_18790 PF01063 Amino-transferase class IV FY143_18795 PF01432 Peptidase family M3 FY143_18795 PF08439 Oligopeptidase F FY143_18800 PF00072 Response regulator receiver domain FY143_18800 PF00158 Sigma-54 interaction domain FY143_18800 PF02954 Bacterial regulatory protein, Fis family FY143_18805 PF05951 Bacterial protein of unknown function (DUF882) FY143_18810 PF02887 Pyruvate kinase, alpha/beta domain FY143_18810 PF00224 Pyruvate kinase, barrel domain FY143_18830 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY143_18840 PF00444 Ribosomal protein L36 FY143_18845 PF02222 ATP-grasp domain FY143_18845 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY143_18850 PF00731 AIR carboxylase FY143_18880 PF00459 Inositol monophosphatase family FY143_18890 PF00691 OmpA family FY143_18890 PF01389 OmpA-like transmembrane domain FY143_18895 PF00890 FAD binding domain FY143_18900 PF00664 ABC transporter transmembrane region FY143_18900 PF00005 ABC transporter FY143_18905 PF01197 Ribosomal protein L31 FY143_18925 PF00274 Fructose-bisphosphate aldolase class-I FY143_18930 PF00162 Phosphoglycerate kinase FY143_18935 PF03471 Transporter associated domain FY143_18935 PF00999 Sodium/hydrogen exchanger family FY143_18945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY143_18945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY143_18950 PF02779 Transketolase, pyrimidine binding domain FY143_18950 PF02780 Transketolase, C-terminal domain FY143_18950 PF00456 Transketolase, thiamine diphosphate binding domain FY143_18970 PF00571 CBS domain FY143_18970 PF03471 Transporter associated domain FY143_18970 PF01595 Cyclin M transmembrane N-terminal domain FY143_18980 PF13277 YmdB-like protein FY143_18995 PF01709 Transcriptional regulator FY143_19000 PF00296 Luciferase-like monooxygenase FY143_19005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_19005 PF00672 HAMP domain FY143_19010 PF02075 Crossover junction endodeoxyribonuclease RuvC FY143_19015 PF07499 RuvA, C-terminal domain FY143_19015 PF01330 RuvA N terminal domain FY143_19020 PF05491 RuvB C-terminal winged helix domain FY143_19020 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY143_19020 PF17864 RuvB AAA lid domain FY143_19035 PF00293 NUDIX domain FY143_19040 PF00293 NUDIX domain FY143_19045 PF03061 Thioesterase superfamily FY143_19050 PF01618 MotA/TolQ/ExbB proton channel family FY143_19055 PF02472 Biopolymer transport protein ExbD/TolR FY143_19065 PF04052 TolB amino-terminal domain FY143_19065 PF07676 WD40-like Beta Propeller Repeat FY143_19070 PF00691 OmpA family FY143_19080 PF01171 PP-loop family FY143_19085 PF17862 AAA+ lid domain FY143_19085 PF06480 FtsH Extracellular FY143_19085 PF01434 Peptidase family M41 FY143_19085 PF00004 ATPase family associated with various cellular activities (AAA) FY143_19090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY143_19090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY143_19090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY143_19090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY143_19095 PF13505 Outer membrane protein beta-barrel domain FY143_19105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY143_19105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_19105 PF01842 ACT domain FY143_19140 PF00085 Thioredoxin FY143_19150 PF03966 Trm112p-like protein FY143_19155 PF01835 MG2 domain FY143_19155 PF17962 Bacterial macroglobulin domain 6 FY143_19155 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY143_19155 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY143_19155 PF07678 A-macroglobulin TED domain FY143_19155 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY143_19155 PF07703 Alpha-2-macroglobulin bait region domain FY143_19155 PF00207 Alpha-2-macroglobulin family FY143_19155 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY143_19160 PF06832 Penicillin-Binding Protein C-terminus Family FY143_19160 PF00912 Transglycosylase FY143_19160 PF00905 Penicillin binding protein transpeptidase domain FY143_19170 PF07687 Peptidase dimerisation domain FY143_19170 PF01546 Peptidase family M20/M25/M40 FY143_19250 PF01541 GIY-YIG catalytic domain FY143_19250 PF02151 UvrB/uvrC motif FY143_19250 PF08459 UvrC Helix-hairpin-helix N-terminal FY143_19270 PF02796 Helix-turn-helix domain of resolvase FY143_19270 PF00239 Resolvase, N terminal domain FY143_19305 PF13408 Recombinase zinc beta ribbon domain FY143_19305 PF00239 Resolvase, N terminal domain FY143_19305 PF07508 Recombinase FY143_19310 PF07943 Penicillin-binding protein 5, C-terminal domain FY143_19310 PF00768 D-alanyl-D-alanine carboxypeptidase FY143_19315 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY143_19315 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY143_19320 PF01206 Sulfurtransferase TusA FY143_19325 PF03734 L,D-transpeptidase catalytic domain FY143_19330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY143_19335 PF02899 Phage integrase, N-terminal SAM-like domain FY143_19335 PF00589 Phage integrase family FY143_19345 PF01202 Shikimate kinase FY143_19350 PF01761 3-dehydroquinate synthase FY143_19355 PF01722 BolA-like protein FY143_19360 PF00226 DnaJ domain FY143_19365 PF12556 Cobaltochelatase CobS subunit N terminal FY143_19365 PF08406 CbbQ/NirQ/NorQ C-terminal FY143_19365 PF07728 AAA domain (dynein-related subfamily) FY143_19370 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY143_19370 PF06213 Cobalamin biosynthesis protein CobT FY143_19385 PF02592 Putative vitamin uptake transporter FY143_19390 PF00830 Ribosomal L28 family FY143_19405 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY143_19405 PF00753 Metallo-beta-lactamase superfamily FY143_19410 PF01209 ubiE/COQ5 methyltransferase family FY143_19415 PF00155 Aminotransferase class I and II FY143_19420 PF02153 Prephenate dehydrogenase FY143_19435 PF04752 ChaC-like protein FY143_19455 PF00005 ABC transporter FY143_19465 PF00156 Phosphoribosyl transferase domain FY143_19470 PF00072 Response regulator receiver domain FY143_19480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY143_19480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY143_19490 PF14698 Argininosuccinate lyase C-terminal FY143_19490 PF00206 Lyase FY143_19495 PF08534 Redoxin FY143_19500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY143_19500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY143_19505 PF01012 Electron transfer flavoprotein domain FY143_19505 PF00766 Electron transfer flavoprotein FAD-binding domain FY143_19510 PF01012 Electron transfer flavoprotein domain FY143_19520 PF01923 Cobalamin adenosyltransferase FY143_19530 PF00106 short chain dehydrogenase FY143_19540 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY143_19545 PF06029 AlkA N-terminal domain FY143_19545 PF02805 Metal binding domain of Ada FY143_19545 PF12833 Helix-turn-helix domain FY143_19545 PF00730 HhH-GPD superfamily base excision DNA repair protein FY143_19550 PF06114 IrrE N-terminal-like domain FY143_19550 PF09856 Predicted transcriptional regulator (DUF2083) FY143_19550 PF01381 Helix-turn-helix FY143_19555 PF01039 Carboxyl transferase domain FY143_19560 PF02798 Glutathione S-transferase, N-terminal domain FY143_19570 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY143_19575 PF00364 Biotin-requiring enzyme FY143_19575 PF02785 Biotin carboxylase C-terminal domain FY143_19575 PF00289 Biotin carboxylase, N-terminal domain FY143_19575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_19575 PF18140 Propionyl-coenzyme A carboxylase BT domain FY143_19580 PF02310 B12 binding domain FY143_19580 PF01642 Methylmalonyl-CoA mutase FY143_19590 PF01266 FAD dependent oxidoreductase FY143_19590 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY143_19595 PF01022 Bacterial regulatory protein, arsR family FY143_19610 PF13407 Periplasmic binding protein domain FY143_19615 PF02653 Branched-chain amino acid transport system / permease component FY143_19620 PF00005 ABC transporter FY143_19630 PF01381 Helix-turn-helix FY143_19645 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY143_19670 PF00480 ROK family FY143_19670 PF01047 MarR family FY143_19680 PF00528 Binding-protein-dependent transport system inner membrane component FY143_19685 PF00528 Binding-protein-dependent transport system inner membrane component FY143_19690 PF17912 MalK OB fold domain FY143_19690 PF00005 ABC transporter FY143_19695 PF03009 Glycerophosphoryl diester phosphodiesterase family FY143_19705 PF00722 Glycosyl hydrolases family 16 FY143_19705 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY143_19710 PF01272 Transcription elongation factor, GreA/GreB, C-term FY143_19710 PF03449 Transcription elongation factor, N-terminal FY143_19725 PF13439 Glycosyltransferase Family 4 FY143_19725 PF00534 Glycosyl transferases group 1 FY143_19730 PF13439 Glycosyltransferase Family 4 FY143_19730 PF00534 Glycosyl transferases group 1 FY143_19750 PF13614 AAA domain FY143_19770 PF01943 Polysaccharide biosynthesis protein FY143_19825 PF01757 Acyltransferase family FY143_19835 PF02810 SEC-C motif FY143_19835 PF07517 SecA DEAD-like domain FY143_19835 PF01043 SecA preprotein cross-linking domain FY143_19835 PF07516 SecA Wing and Scaffold domain FY143_19845 PF01960 ArgJ family FY143_19850 PF00583 Acetyltransferase (GNAT) family FY143_19850 PF13508 Acetyltransferase (GNAT) domain FY143_19855 PF00293 NUDIX domain FY143_19870 PF08241 Methyltransferase domain FY143_19880 PF00462 Glutaredoxin FY143_19885 PF00795 Carbon-nitrogen hydrolase FY143_19895 PF08241 Methyltransferase domain FY143_19915 PF00378 Enoyl-CoA hydratase/isomerase FY143_19925 PF00528 Binding-protein-dependent transport system inner membrane component FY143_19930 PF00528 Binding-protein-dependent transport system inner membrane component FY143_19935 PF00005 ABC transporter FY143_19940 PF08713 DNA alkylation repair enzyme FY143_19945 PF00171 Aldehyde dehydrogenase family FY143_19955 PF08447 PAS fold FY143_19955 PF08448 PAS fold FY143_19955 PF00990 Diguanylate cyclase, GGDEF domain FY143_19955 PF00563 EAL domain FY143_19965 PF00561 alpha/beta hydrolase fold FY143_19975 PF05336 L-rhamnose mutarotase FY143_19980 PF02653 Branched-chain amino acid transport system / permease component FY143_19985 PF02653 Branched-chain amino acid transport system / permease component FY143_19990 PF00005 ABC transporter FY143_19995 PF13407 Periplasmic binding protein domain FY143_20000 PF00455 DeoR C terminal sensor domain FY143_20000 PF08220 DeoR-like helix-turn-helix domain FY143_20005 PF00596 Class II Aldolase and Adducin N-terminal domain FY143_20010 PF01261 Xylose isomerase-like TIM barrel FY143_20015 PF02548 Ketopantoate hydroxymethyltransferase FY143_20020 PF02569 Pantoate-beta-alanine ligase FY143_20025 PF00378 Enoyl-CoA hydratase/isomerase FY143_20030 PF00682 HMGL-like FY143_20035 PF02785 Biotin carboxylase C-terminal domain FY143_20035 PF00364 Biotin-requiring enzyme FY143_20035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_20035 PF00289 Biotin carboxylase, N-terminal domain FY143_20040 PF01039 Carboxyl transferase domain FY143_20045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_20045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY143_20045 PF02770 Acyl-CoA dehydrogenase, middle domain FY143_20050 PF01037 Lrp/AsnC ligand binding domain FY143_20055 PF02803 Thiolase, C-terminal domain FY143_20055 PF00108 Thiolase, N-terminal domain FY143_20060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_20060 PF02770 Acyl-CoA dehydrogenase, middle domain FY143_20060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY143_20065 PF00676 Dehydrogenase E1 component FY143_20065 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY143_20070 PF02779 Transketolase, pyrimidine binding domain FY143_20070 PF02780 Transketolase, C-terminal domain FY143_20075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY143_20075 PF00364 Biotin-requiring enzyme FY143_20075 PF02817 e3 binding domain FY143_20080 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY143_20080 PF01676 Metalloenzyme superfamily FY143_20090 PF04143 Sulphur transport FY143_20100 PF00753 Metallo-beta-lactamase superfamily FY143_20100 PF04273 Putative phosphatase (DUF442) FY143_20110 PF00106 short chain dehydrogenase FY143_20115 PF00561 alpha/beta hydrolase fold FY143_20125 PF07729 FCD domain FY143_20125 PF00392 Bacterial regulatory proteins, gntR family FY143_20135 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20140 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20140 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_20145 PF00005 ABC transporter FY143_20145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_20150 PF00005 ABC transporter FY143_20150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_20155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_20165 PF13378 Enolase C-terminal domain-like FY143_20165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_20170 PF00296 Luciferase-like monooxygenase FY143_20175 PF00296 Luciferase-like monooxygenase FY143_20185 PF05368 NmrA-like family FY143_20190 PF00296 Luciferase-like monooxygenase FY143_20195 PF01546 Peptidase family M20/M25/M40 FY143_20195 PF07687 Peptidase dimerisation domain FY143_20200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_20220 PF00296 Luciferase-like monooxygenase FY143_20225 PF03466 LysR substrate binding domain FY143_20225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_20235 PF00248 Aldo/keto reductase family FY143_20240 PF00005 ABC transporter FY143_20240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_20245 PF00005 ABC transporter FY143_20245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_20250 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20255 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_20270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_20270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY143_20270 PF02770 Acyl-CoA dehydrogenase, middle domain FY143_20275 PF00296 Luciferase-like monooxygenase FY143_20290 PF00296 Luciferase-like monooxygenase FY143_20295 PF01613 Flavin reductase like domain FY143_20305 PF02082 Transcriptional regulator FY143_20310 PF00296 Luciferase-like monooxygenase FY143_20315 PF00296 Luciferase-like monooxygenase FY143_20320 PF01546 Peptidase family M20/M25/M40 FY143_20320 PF07687 Peptidase dimerisation domain FY143_20330 PF00005 ABC transporter FY143_20335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_20345 PF01266 FAD dependent oxidoreductase FY143_20350 PF01037 Lrp/AsnC ligand binding domain FY143_20355 PF00005 ABC transporter FY143_20355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_20360 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_20360 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20365 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_20380 PF00202 Aminotransferase class-III FY143_20395 PF01266 FAD dependent oxidoreductase FY143_20400 PF00171 Aldehyde dehydrogenase family FY143_20405 PF00180 Isocitrate/isopropylmalate dehydrogenase FY143_20410 PF00171 Aldehyde dehydrogenase family FY143_20425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_20430 PF07687 Peptidase dimerisation domain FY143_20430 PF01546 Peptidase family M20/M25/M40 FY143_20445 PF01032 FecCD transport family FY143_20450 PF00005 ABC transporter FY143_20455 PF00127 Copper binding proteins, plastocyanin/azurin family FY143_20460 PF01209 ubiE/COQ5 methyltransferase family FY143_20475 PF01032 FecCD transport family FY143_20480 PF00005 ABC transporter FY143_20485 PF08281 Sigma-70, region 4 FY143_20485 PF04542 Sigma-70 region 2 FY143_20485 PF12680 SnoaL-like domain FY143_20495 PF07715 TonB-dependent Receptor Plug Domain FY143_20495 PF00593 TonB dependent receptor FY143_20505 PF00664 ABC transporter transmembrane region FY143_20505 PF00005 ABC transporter FY143_20510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY143_20510 PF00529 HlyD membrane-fusion protein of T1SS FY143_20515 PF00196 Bacterial regulatory proteins, luxR family FY143_20515 PF00072 Response regulator receiver domain FY143_20520 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20525 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_20525 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_20530 PF00005 ABC transporter FY143_20545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_20560 PF01112 Asparaginase FY143_20565 PF03466 LysR substrate binding domain FY143_20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_20570 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20575 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_20575 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20580 PF00005 ABC transporter FY143_20580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_20590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_20595 PF01546 Peptidase family M20/M25/M40 FY143_20600 PF13407 Periplasmic binding protein domain FY143_20605 PF00005 ABC transporter FY143_20610 PF02653 Branched-chain amino acid transport system / permease component FY143_20615 PF07722 Peptidase C26 FY143_20620 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_20625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_20630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY143_20650 PF01266 FAD dependent oxidoreductase FY143_20655 PF08447 PAS fold FY143_20655 PF13426 PAS domain FY143_20655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_20660 PF00296 Luciferase-like monooxygenase FY143_20665 PF03972 MmgE/PrpD family FY143_20670 PF00005 ABC transporter FY143_20675 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20680 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20685 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_20690 PF00390 Malic enzyme, N-terminal domain FY143_20690 PF03949 Malic enzyme, NAD binding domain FY143_20690 PF01515 Phosphate acetyl/butaryl transferase FY143_20695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_20695 PF03466 LysR substrate binding domain FY143_20700 PF01011 PQQ enzyme repeat FY143_20705 PF01050 Mannose-6-phosphate isomerase FY143_20705 PF00483 Nucleotidyl transferase FY143_20715 PF01547 Bacterial extracellular solute-binding protein FY143_20720 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20725 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20730 PF00005 ABC transporter FY143_20730 PF17912 MalK OB fold domain FY143_20740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_20740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_20745 PF06508 Queuosine biosynthesis protein QueC FY143_20750 PF01242 6-pyruvoyl tetrahydropterin synthase FY143_20755 PF04055 Radical SAM superfamily FY143_20760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_20760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_20770 PF03459 TOBE domain FY143_20770 PF00005 ABC transporter FY143_20770 PF17912 MalK OB fold domain FY143_20775 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20780 PF00528 Binding-protein-dependent transport system inner membrane component FY143_20785 PF01547 Bacterial extracellular solute-binding protein FY143_20790 PF00356 Bacterial regulatory proteins, lacI family FY143_20800 PF02245 Methylpurine-DNA glycosylase (MPG) FY143_20820 PF03734 L,D-transpeptidase catalytic domain FY143_20820 PF17969 L,D-transpeptidase C-terminal domain FY143_20825 PF00672 HAMP domain FY143_20825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_20830 PF00202 Aminotransferase class-III FY143_20845 PF02397 Bacterial sugar transferase FY143_20850 PF02563 Polysaccharide biosynthesis/export protein FY143_20865 PF00529 HlyD membrane-fusion protein of T1SS FY143_20870 PF00664 ABC transporter transmembrane region FY143_20870 PF00005 ABC transporter FY143_20885 PF00196 Bacterial regulatory proteins, luxR family FY143_20895 PF16363 GDP-mannose 4,6 dehydratase FY143_20900 PF16363 GDP-mannose 4,6 dehydratase FY143_20930 PF00535 Glycosyl transferase family 2 FY143_20930 PF07238 PilZ domain FY143_20930 PF03552 Cellulose synthase FY143_20940 PF01270 Glycosyl hydrolases family 8 FY143_20950 PF01546 Peptidase family M20/M25/M40 FY143_20950 PF07687 Peptidase dimerisation domain FY143_20965 PF00202 Aminotransferase class-III FY143_20970 PF00892 EamA-like transporter family FY143_20975 PF00375 Sodium:dicarboxylate symporter family FY143_20980 PF00512 His Kinase A (phospho-acceptor) domain FY143_20980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_20985 PF02954 Bacterial regulatory protein, Fis family FY143_20985 PF00072 Response regulator receiver domain FY143_20985 PF00158 Sigma-54 interaction domain FY143_21000 PF01266 FAD dependent oxidoreductase FY143_21005 PF00842 Alanine racemase, C-terminal domain FY143_21005 PF01168 Alanine racemase, N-terminal domain FY143_21010 PF01037 Lrp/AsnC ligand binding domain FY143_21015 PF08543 Phosphomethylpyrimidine kinase FY143_21020 PF02581 Thiamine monophosphate synthase FY143_21025 PF02110 Hydroxyethylthiazole kinase family FY143_21030 PF09084 NMT1/THI5 like FY143_21035 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21045 PF01055 Glycosyl hydrolases family 31 FY143_21050 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21055 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21060 PF01547 Bacterial extracellular solute-binding protein FY143_21065 PF00005 ABC transporter FY143_21065 PF08402 TOBE domain FY143_21070 PF07702 UTRA domain FY143_21070 PF00392 Bacterial regulatory proteins, gntR family FY143_21075 PF00296 Luciferase-like monooxygenase FY143_21080 PF00248 Aldo/keto reductase family FY143_21085 PF01613 Flavin reductase like domain FY143_21090 PF12951 Passenger-associated-transport-repeat FY143_21100 PF00873 AcrB/AcrD/AcrF family FY143_21105 PF13533 Biotin-lipoyl like FY143_21110 PF02563 Polysaccharide biosynthesis/export protein FY143_21120 PF13439 Glycosyltransferase Family 4 FY143_21120 PF00534 Glycosyl transferases group 1 FY143_21130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_21135 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21140 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21140 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_21145 PF01979 Amidohydrolase family FY143_21160 PF03841 L-seryl-tRNA selenium transferase FY143_21165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_21165 PF00005 ABC transporter FY143_21170 PF00043 Glutathione S-transferase, C-terminal domain FY143_21170 PF02798 Glutathione S-transferase, N-terminal domain FY143_21185 PF00296 Luciferase-like monooxygenase FY143_21190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_21190 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY143_21195 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_21200 PF00171 Aldehyde dehydrogenase family FY143_21210 PF03786 D-mannonate dehydratase (UxuA) FY143_21215 PF00107 Zinc-binding dehydrogenase FY143_21215 PF08240 Alcohol dehydrogenase GroES-like domain FY143_21220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_21230 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_21235 PF00392 Bacterial regulatory proteins, gntR family FY143_21235 PF07729 FCD domain FY143_21240 PF13419 Haloacid dehalogenase-like hydrolase FY143_21245 PF03775 Septum formation inhibitor MinC, C-terminal domain FY143_21245 PF05209 Septum formation inhibitor MinC, N-terminal domain FY143_21250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY143_21255 PF03776 Septum formation topological specificity factor MinE FY143_21270 PF00990 Diguanylate cyclase, GGDEF domain FY143_21270 PF00563 EAL domain FY143_21270 PF08448 PAS fold FY143_21270 PF08447 PAS fold FY143_21275 PF01425 Amidase FY143_21285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_21290 PF00480 ROK family FY143_21290 PF01047 MarR family FY143_21295 PF01547 Bacterial extracellular solute-binding protein FY143_21300 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21305 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21310 PF00005 ABC transporter FY143_21310 PF17912 MalK OB fold domain FY143_21310 PF03459 TOBE domain FY143_21320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_21320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_21325 PF13660 Domain of unknown function (DUF4147) FY143_21325 PF05161 MOFRL family FY143_21350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY143_21350 PF14579 Helix-hairpin-helix motif FY143_21350 PF01336 OB-fold nucleic acid binding domain FY143_21350 PF02811 PHP domain FY143_21350 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY143_21360 PF07690 Major Facilitator Superfamily FY143_21365 PF00392 Bacterial regulatory proteins, gntR family FY143_21365 PF07729 FCD domain FY143_21370 PF02653 Branched-chain amino acid transport system / permease component FY143_21375 PF02653 Branched-chain amino acid transport system / permease component FY143_21380 PF00005 ABC transporter FY143_21385 PF13407 Periplasmic binding protein domain FY143_21390 PF00920 Dehydratase family FY143_21400 PF00266 Aminotransferase class-V FY143_21405 PF00005 ABC transporter FY143_21405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_21410 PF00005 ABC transporter FY143_21410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_21415 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21415 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_21420 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_21430 PF09397 Ftsk gamma domain FY143_21430 PF17854 FtsK alpha domain FY143_21430 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY143_21430 PF01580 FtsK/SpoIIIE family FY143_21435 PF02615 Malate/L-lactate dehydrogenase FY143_21440 PF08448 PAS fold FY143_21440 PF08447 PAS fold FY143_21440 PF00990 Diguanylate cyclase, GGDEF domain FY143_21440 PF00563 EAL domain FY143_21450 PF07883 Cupin domain FY143_21450 PF05899 Protein of unknown function (DUF861) FY143_21455 PF13426 PAS domain FY143_21455 PF08448 PAS fold FY143_21455 PF08447 PAS fold FY143_21455 PF00990 Diguanylate cyclase, GGDEF domain FY143_21455 PF00563 EAL domain FY143_21455 PF05231 MASE1 FY143_21460 PF00005 ABC transporter FY143_21465 PF02653 Branched-chain amino acid transport system / permease component FY143_21470 PF13407 Periplasmic binding protein domain FY143_21475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_21475 PF03466 LysR substrate binding domain FY143_21480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY143_21480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY143_21500 PF03922 OmpW family FY143_21510 PF08402 TOBE domain FY143_21510 PF00005 ABC transporter FY143_21515 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21520 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21525 PF13416 Bacterial extracellular solute-binding protein FY143_21530 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY143_21530 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY143_21545 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY143_21545 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY143_21550 PF00005 ABC transporter FY143_21555 PF00950 ABC 3 transport family FY143_21560 PF01297 Zinc-uptake complex component A periplasmic FY143_21570 PF01053 Cys/Met metabolism PLP-dependent enzyme FY143_21575 PF01547 Bacterial extracellular solute-binding protein FY143_21580 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21585 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21590 PF00005 ABC transporter FY143_21590 PF17912 MalK OB fold domain FY143_21595 PF08402 TOBE domain FY143_21595 PF00005 ABC transporter FY143_21600 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21605 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21610 PF08013 Tagatose 6 phosphate kinase FY143_21615 PF00294 pfkB family carbohydrate kinase FY143_21630 PF16912 Glucose dehydrogenase C-terminus FY143_21630 PF08240 Alcohol dehydrogenase GroES-like domain FY143_21635 PF00356 Bacterial regulatory proteins, lacI family FY143_21650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY143_21650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY143_21655 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_21665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_21670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_21670 PF03466 LysR substrate binding domain FY143_21675 PF07690 Major Facilitator Superfamily FY143_21680 PF02311 AraC-like ligand binding domain FY143_21680 PF12833 Helix-turn-helix domain FY143_21695 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21700 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21705 PF17912 MalK OB fold domain FY143_21705 PF00005 ABC transporter FY143_21710 PF00248 Aldo/keto reductase family FY143_21725 PF00392 Bacterial regulatory proteins, gntR family FY143_21725 PF07729 FCD domain FY143_21730 PF01370 NAD dependent epimerase/dehydratase family FY143_21735 PF04962 KduI/IolB family FY143_21745 PF00701 Dihydrodipicolinate synthetase family FY143_21750 PF13378 Enolase C-terminal domain-like FY143_21750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_21755 PF04909 Amidohydrolase FY143_21760 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_21770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_21775 PF02311 AraC-like ligand binding domain FY143_21775 PF12833 Helix-turn-helix domain FY143_21780 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21785 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21790 PF08402 TOBE domain FY143_21790 PF00005 ABC transporter FY143_21800 PF00295 Glycosyl hydrolases family 28 FY143_21805 PF07470 Glycosyl Hydrolase Family 88 FY143_21810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_21810 PF00512 His Kinase A (phospho-acceptor) domain FY143_21810 PF00672 HAMP domain FY143_21815 PF00072 Response regulator receiver domain FY143_21815 PF00486 Transcriptional regulatory protein, C terminal FY143_21830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY143_21835 PF00005 ABC transporter FY143_21835 PF02687 FtsX-like permease family FY143_21835 PF12704 MacB-like periplasmic core domain FY143_21840 PF00550 Phosphopantetheine attachment site FY143_21870 PF01165 Ribosomal protein S21 FY143_21880 PF00313 'Cold-shock' DNA-binding domain FY143_21885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_21885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_21900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_21900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_21905 PF00440 Bacterial regulatory proteins, tetR family FY143_21905 PF17938 Tetracyclin repressor-like, C-terminal domain FY143_21910 PF13416 Bacterial extracellular solute-binding protein FY143_21915 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21920 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21925 PF17912 MalK OB fold domain FY143_21925 PF03459 TOBE domain FY143_21925 PF00005 ABC transporter FY143_21930 PF01261 Xylose isomerase-like TIM barrel FY143_21935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY143_21935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_21935 PF01842 ACT domain FY143_21945 PF00356 Bacterial regulatory proteins, lacI family FY143_21960 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY143_21965 PF00005 ABC transporter FY143_21965 PF17912 MalK OB fold domain FY143_21975 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21980 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21985 PF00005 ABC transporter FY143_21990 PF00528 Binding-protein-dependent transport system inner membrane component FY143_21995 PF09084 NMT1/THI5 like FY143_22000 PF00296 Luciferase-like monooxygenase FY143_22005 PF17912 MalK OB fold domain FY143_22005 PF00005 ABC transporter FY143_22010 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22015 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22020 PF13416 Bacterial extracellular solute-binding protein FY143_22035 PF08447 PAS fold FY143_22035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_22035 PF13426 PAS domain FY143_22050 PF02954 Bacterial regulatory protein, Fis family FY143_22050 PF01590 GAF domain FY143_22050 PF00158 Sigma-54 interaction domain FY143_22055 PF00107 Zinc-binding dehydrogenase FY143_22055 PF08240 Alcohol dehydrogenase GroES-like domain FY143_22060 PF00743 Flavin-binding monooxygenase-like FY143_22070 PF07729 FCD domain FY143_22070 PF00392 Bacterial regulatory proteins, gntR family FY143_22075 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_22080 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22085 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22090 PF00005 ABC transporter FY143_22095 PF00005 ABC transporter FY143_22095 PF08402 TOBE domain FY143_22105 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22110 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22115 PF01177 Asp/Glu/Hydantoin racemase FY143_22120 PF08281 Sigma-70, region 4 FY143_22120 PF04542 Sigma-70 region 2 FY143_22150 PF03466 LysR substrate binding domain FY143_22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_22155 PF00144 Beta-lactamase FY143_22160 PF07729 FCD domain FY143_22160 PF00392 Bacterial regulatory proteins, gntR family FY143_22165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_22170 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22175 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22175 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_22185 PF00005 ABC transporter FY143_22185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_22190 PF00072 Response regulator receiver domain FY143_22190 PF00989 PAS fold FY143_22190 PF01627 Hpt domain FY143_22190 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY143_22190 PF00512 His Kinase A (phospho-acceptor) domain FY143_22190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_22195 PF00072 Response regulator receiver domain FY143_22200 PF02954 Bacterial regulatory protein, Fis family FY143_22200 PF00072 Response regulator receiver domain FY143_22200 PF00158 Sigma-54 interaction domain FY143_22210 PF00313 'Cold-shock' DNA-binding domain FY143_22220 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal FY143_22220 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FY143_22220 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY143_22225 PF00005 ABC transporter FY143_22225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_22230 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_22230 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22235 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_22250 PF03466 LysR substrate binding domain FY143_22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_22270 PF03466 LysR substrate binding domain FY143_22270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_22275 PF07690 Major Facilitator Superfamily FY143_22285 PF01053 Cys/Met metabolism PLP-dependent enzyme FY143_22290 PF01037 Lrp/AsnC ligand binding domain FY143_22300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_22300 PF00005 ABC transporter FY143_22310 PF00300 Histidine phosphatase superfamily (branch 1) FY143_22310 PF00106 short chain dehydrogenase FY143_22315 PF01266 FAD dependent oxidoreductase FY143_22320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_22325 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22330 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_22330 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22335 PF01266 FAD dependent oxidoreductase FY143_22345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_22345 PF03466 LysR substrate binding domain FY143_22350 PF00795 Carbon-nitrogen hydrolase FY143_22365 PF08402 TOBE domain FY143_22365 PF00005 ABC transporter FY143_22370 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22375 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22380 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY143_22385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY143_22390 PF01266 FAD dependent oxidoreductase FY143_22390 PF04324 BFD-like [2Fe-2S] binding domain FY143_22395 PF04324 BFD-like [2Fe-2S] binding domain FY143_22395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_22400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY143_22400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY143_22405 PF09137 Glucodextranase, domain N FY143_22405 PF00723 Glycosyl hydrolases family 15 FY143_22410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY143_22410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY143_22415 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY143_22415 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY143_22425 PF00990 Diguanylate cyclase, GGDEF domain FY143_22430 PF00005 ABC transporter FY143_22430 PF06472 ABC transporter transmembrane region 2 FY143_22445 PF07690 Major Facilitator Superfamily FY143_22450 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY143_22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_22455 PF03466 LysR substrate binding domain FY143_22465 PF16363 GDP-mannose 4,6 dehydratase FY143_22470 PF01370 NAD dependent epimerase/dehydratase family FY143_22495 PF00196 Bacterial regulatory proteins, luxR family FY143_22495 PF00072 Response regulator receiver domain FY143_22500 PF02585 GlcNAc-PI de-N-acetylase FY143_22505 PF00483 Nucleotidyl transferase FY143_22510 PF08421 Putative zinc binding domain FY143_22510 PF08484 C-methyltransferase C-terminal domain FY143_22515 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY143_22520 PF09940 Domain of unknown function (DUF2172) FY143_22520 PF16221 winged helix-turn-helix FY143_22520 PF16254 Domain of unknown function (DUF4910) FY143_22525 PF01370 NAD dependent epimerase/dehydratase family FY143_22530 PF00202 Aminotransferase class-III FY143_22535 PF00196 Bacterial regulatory proteins, luxR family FY143_22535 PF00072 Response regulator receiver domain FY143_22540 PF08448 PAS fold FY143_22540 PF01739 CheR methyltransferase, SAM binding domain FY143_22540 PF03705 CheR methyltransferase, all-alpha domain FY143_22540 PF01339 CheB methylesterase FY143_22560 PF00534 Glycosyl transferases group 1 FY143_22560 PF13439 Glycosyltransferase Family 4 FY143_22570 PF00953 Glycosyl transferase family 4 FY143_22590 PF00534 Glycosyl transferases group 1 FY143_22590 PF13439 Glycosyltransferase Family 4 FY143_22595 PF00534 Glycosyl transferases group 1 FY143_22595 PF13439 Glycosyltransferase Family 4 FY143_22605 PF00011 Hsp20/alpha crystallin family FY143_22615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_22615 PF13378 Enolase C-terminal domain-like FY143_22625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY143_22625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY143_22640 PF16889 Heparinase II/III N-terminus FY143_22640 PF07940 Heparinase II/III-like protein FY143_22645 PF01547 Bacterial extracellular solute-binding protein FY143_22650 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22655 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22660 PF17912 MalK OB fold domain FY143_22660 PF00005 ABC transporter FY143_22665 PF07729 FCD domain FY143_22665 PF00392 Bacterial regulatory proteins, gntR family FY143_22670 PF01266 FAD dependent oxidoreductase FY143_22675 PF00106 short chain dehydrogenase FY143_22675 PF00300 Histidine phosphatase superfamily (branch 1) FY143_22685 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_22690 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22695 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22700 PF00005 ABC transporter FY143_22705 PF01266 FAD dependent oxidoreductase FY143_22710 PF10415 Fumarase C C-terminus FY143_22710 PF00206 Lyase FY143_22715 PF01266 FAD dependent oxidoreductase FY143_22720 PF00005 ABC transporter FY143_22720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_22725 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_22725 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22730 PF00528 Binding-protein-dependent transport system inner membrane component FY143_22735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_22740 PF05378 Hydantoinase/oxoprolinase N-terminal region FY143_22740 PF01968 Hydantoinase/oxoprolinase FY143_22760 PF01968 Hydantoinase/oxoprolinase FY143_22760 PF05378 Hydantoinase/oxoprolinase N-terminal region FY143_22765 PF02538 Hydantoinase B/oxoprolinase FY143_22770 PF01037 Lrp/AsnC ligand binding domain FY143_22795 PF13193 AMP-binding enzyme C-terminal domain FY143_22795 PF00501 AMP-binding enzyme FY143_22805 PF09339 IclR helix-turn-helix domain FY143_22805 PF01614 Bacterial transcriptional regulator FY143_22815 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_22815 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY143_22820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_22825 PF04199 Putative cyclase FY143_22835 PF02566 OsmC-like protein FY143_22850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_22850 PF00672 HAMP domain FY143_22850 PF00512 His Kinase A (phospho-acceptor) domain FY143_22855 PF00486 Transcriptional regulatory protein, C terminal FY143_22855 PF00072 Response regulator receiver domain FY143_22860 PF00561 alpha/beta hydrolase fold FY143_22870 PF00578 AhpC/TSA family FY143_22870 PF02683 Cytochrome C biogenesis protein transmembrane region FY143_22870 PF17991 Thioredoxin like C-terminal domain FY143_22890 PF07690 Major Facilitator Superfamily FY143_22895 PF03193 RsgA GTPase FY143_22935 PF00271 Helicase conserved C-terminal domain FY143_22935 PF00176 SNF2 family N-terminal domain FY143_22935 PF12419 SNF2 Helicase protein FY143_22960 PF01548 Transposase FY143_22960 PF02371 Transposase IS116/IS110/IS902 family FY143_23015 PF01965 DJ-1/PfpI family FY143_23025 PF03389 MobA/MobL family FY143_23025 PF01443 Viral (Superfamily 1) RNA helicase FY143_23025 PF17841 BID domain of Bartonella effector protein (Bep) FY143_23030 PF02371 Transposase IS116/IS110/IS902 family FY143_23030 PF01548 Transposase FY143_23045 PF02534 Type IV secretory system Conjugative DNA transfer FY143_23085 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FY143_23110 PF00376 MerR family regulatory protein FY143_23110 PF13614 AAA domain FY143_23115 PF07506 RepB plasmid partitioning protein FY143_23115 PF02195 ParB-like nuclease domain FY143_23120 PF11800 Replication protein C C-terminal region FY143_23120 PF03428 Replication protein C N-terminal domain FY143_23140 PF05199 GMC oxidoreductase FY143_23140 PF00732 GMC oxidoreductase FY143_23145 PF03466 LysR substrate binding domain FY143_23145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_23190 PF03328 HpcH/HpaI aldolase/citrate lyase family FY143_23195 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY143_23200 PF00775 Dioxygenase FY143_23200 PF04444 Catechol dioxygenase N terminus FY143_23225 PF11972 HTH DNA binding domain FY143_23225 PF07756 Protein of unknown function (DUF1612) FY143_23235 PF13186 Iron-sulfur cluster-binding domain FY143_23235 PF04055 Radical SAM superfamily FY143_23275 PF00106 short chain dehydrogenase FY143_23295 PF03466 LysR substrate binding domain FY143_23295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_23300 PF01494 FAD binding domain FY143_23310 PF02805 Metal binding domain of Ada FY143_23310 PF12833 Helix-turn-helix domain FY143_23340 PF07859 alpha/beta hydrolase fold FY143_23350 PF01638 HxlR-like helix-turn-helix FY143_23360 PF07690 Major Facilitator Superfamily FY143_23370 PF01177 Asp/Glu/Hydantoin racemase FY143_23380 PF00106 short chain dehydrogenase FY143_23395 PF01292 Prokaryotic cytochrome b561 FY143_23400 PF00174 Oxidoreductase molybdopterin binding domain FY143_23415 PF01817 Chorismate mutase type II FY143_23415 PF02153 Prephenate dehydrogenase FY143_23420 PF03466 LysR substrate binding domain FY143_23420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_23425 PF00106 short chain dehydrogenase FY143_23430 PF00561 alpha/beta hydrolase fold FY143_23440 PF03734 L,D-transpeptidase catalytic domain FY143_23440 PF17969 L,D-transpeptidase C-terminal domain FY143_23450 PF01042 Endoribonuclease L-PSP FY143_23455 PF01425 Amidase FY143_23465 PF01381 Helix-turn-helix FY143_23475 PF01381 Helix-turn-helix FY143_23480 PF05973 Phage derived protein Gp49-like (DUF891) FY143_23495 PF02028 BCCT, betaine/carnitine/choline family transporter FY143_23500 PF10011 Predicted membrane protein (DUF2254) FY143_23520 PF00528 Binding-protein-dependent transport system inner membrane component FY143_23525 PF00528 Binding-protein-dependent transport system inner membrane component FY143_23545 PF05114 Protein of unknown function (DUF692) FY143_23570 PF07063 Domain of unknown function (DUF1338) FY143_23575 PF00171 Aldehyde dehydrogenase family FY143_23580 PF00155 Aminotransferase class I and II FY143_23585 PF13183 4Fe-4S dicluster domain FY143_23585 PF02913 FAD linked oxidases, C-terminal domain FY143_23585 PF01565 FAD binding domain FY143_23590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY143_23590 PF00205 Thiamine pyrophosphate enzyme, central domain FY143_23590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY143_23595 PF01266 FAD dependent oxidoreductase FY143_23600 PF00005 ABC transporter FY143_23605 PF00528 Binding-protein-dependent transport system inner membrane component FY143_23620 PF03466 LysR substrate binding domain FY143_23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_23635 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY143_23660 PF00586 AIR synthase related protein, N-terminal domain FY143_23660 PF02769 AIR synthase related protein, C-terminal domain FY143_23670 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY143_23670 PF04055 Radical SAM superfamily FY143_23675 PF00795 Carbon-nitrogen hydrolase FY143_23685 PF00155 Aminotransferase class I and II FY143_23685 PF00392 Bacterial regulatory proteins, gntR family FY143_23730 PF07478 D-ala D-ala ligase C-terminus FY143_23730 PF01820 D-ala D-ala ligase N-terminus FY143_23745 PF01850 PIN domain FY143_23750 PF09957 Bacterial antitoxin of type II TA system, VapB FY143_23755 PF12833 Helix-turn-helix domain FY143_23755 PF02311 AraC-like ligand binding domain FY143_23770 PF00561 alpha/beta hydrolase fold FY143_23790 PF00196 Bacterial regulatory proteins, luxR family FY143_23800 PF00857 Isochorismatase family FY143_23805 PF00561 alpha/beta hydrolase fold FY143_23815 PF00561 alpha/beta hydrolase fold FY143_23825 PF00106 short chain dehydrogenase FY143_23830 PF02627 Carboxymuconolactone decarboxylase family FY143_23840 PF05368 NmrA-like family FY143_23845 PF02082 Transcriptional regulator FY143_23850 PF00440 Bacterial regulatory proteins, tetR family FY143_23870 PF00440 Bacterial regulatory proteins, tetR family FY143_23885 PF00672 HAMP domain FY143_23885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_23905 PF01068 ATP dependent DNA ligase domain FY143_23905 PF13298 DNA polymerase Ligase (LigD) FY143_23905 PF04679 ATP dependent DNA ligase C terminal region FY143_23920 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY143_23920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY143_23920 PF14579 Helix-hairpin-helix motif FY143_23920 PF02811 PHP domain FY143_23940 PF05284 Protein of unknown function (DUF736) FY143_23945 PF00216 Bacterial DNA-binding protein FY143_23950 PF05406 WGR domain FY143_23955 PF02534 Type IV secretory system Conjugative DNA transfer FY143_23970 PF01443 Viral (Superfamily 1) RNA helicase FY143_23970 PF17841 BID domain of Bartonella effector protein (Bep) FY143_23970 PF03389 MobA/MobL family FY143_24010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_24010 PF03466 LysR substrate binding domain FY143_24020 PF00202 Aminotransferase class-III FY143_24030 PF00005 ABC transporter FY143_24030 PF08402 TOBE domain FY143_24035 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24040 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24050 PF00005 ABC transporter FY143_24055 PF02687 FtsX-like permease family FY143_24055 PF12704 MacB-like periplasmic core domain FY143_24065 PF09339 IclR helix-turn-helix domain FY143_24065 PF01614 Bacterial transcriptional regulator FY143_24070 PF00171 Aldehyde dehydrogenase family FY143_24075 PF00465 Iron-containing alcohol dehydrogenase FY143_24080 PF00753 Metallo-beta-lactamase superfamily FY143_24105 PF02308 MgtC family FY143_24110 PF07690 Major Facilitator Superfamily FY143_24115 PF00293 NUDIX domain FY143_24125 PF00589 Phage integrase family FY143_24125 PF02899 Phage integrase, N-terminal SAM-like domain FY143_24140 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY143_24190 PF04956 TrbC/VIRB2 family FY143_24195 PF05101 Type IV secretory pathway, VirB3-like protein FY143_24200 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY143_24205 PF07996 Type IV secretion system proteins FY143_24215 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY143_24225 PF04335 VirB8 protein FY143_24230 PF03524 Conjugal transfer protein FY143_24235 PF03743 Bacterial conjugation TrbI-like protein FY143_24245 PF01022 Bacterial regulatory protein, arsR family FY143_24255 PF14760 Rnk N-terminus FY143_24255 PF01272 Transcription elongation factor, GreA/GreB, C-term FY143_24260 PF01272 Transcription elongation factor, GreA/GreB, C-term FY143_24260 PF03449 Transcription elongation factor, N-terminal FY143_24270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FY143_24270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FY143_24290 PF13426 PAS domain FY143_24290 PF00072 Response regulator receiver domain FY143_24290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_24295 PF13426 PAS domain FY143_24295 PF08447 PAS fold FY143_24295 PF07536 HWE histidine kinase FY143_24300 PF00226 DnaJ domain FY143_24310 PF13454 FAD-NAD(P)-binding FY143_24315 PF01323 DSBA-like thioredoxin domain FY143_24320 PF01244 Membrane dipeptidase (Peptidase family M19) FY143_24330 PF00005 ABC transporter FY143_24330 PF08402 TOBE domain FY143_24335 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24340 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24345 PF00135 Carboxylesterase family FY143_24350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_24350 PF03466 LysR substrate binding domain FY143_24370 PF01850 PIN domain FY143_24375 PF00701 Dihydrodipicolinate synthetase family FY143_24380 PF08450 SMP-30/Gluconolactonase/LRE-like region FY143_24385 PF00392 Bacterial regulatory proteins, gntR family FY143_24385 PF07729 FCD domain FY143_24390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_24395 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24400 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_24400 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24405 PF00005 ABC transporter FY143_24405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_24410 PF13378 Enolase C-terminal domain-like FY143_24410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_24435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY143_24440 PF03480 Bacterial extracellular solute-binding protein, family 7 FY143_24445 PF00196 Bacterial regulatory proteins, luxR family FY143_24445 PF00072 Response regulator receiver domain FY143_24450 PF07730 Histidine kinase FY143_24450 PF17200 Single Cache domain 2 FY143_24455 PF06965 Na+/H+ antiporter 1 FY143_24480 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24485 PF00005 ABC transporter FY143_24485 PF08402 TOBE domain FY143_24490 PF00459 Inositol monophosphatase family FY143_24495 PF01594 AI-2E family transporter FY143_24510 PF05035 2-keto-3-deoxy-galactonokinase FY143_24515 PF00701 Dihydrodipicolinate synthetase family FY143_24520 PF13378 Enolase C-terminal domain-like FY143_24520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY143_24530 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24535 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24540 PF17912 MalK OB fold domain FY143_24540 PF00005 ABC transporter FY143_24545 PF16363 GDP-mannose 4,6 dehydratase FY143_24550 PF01614 Bacterial transcriptional regulator FY143_24550 PF09339 IclR helix-turn-helix domain FY143_24560 PF02311 AraC-like ligand binding domain FY143_24560 PF12833 Helix-turn-helix domain FY143_24580 PF13533 Biotin-lipoyl like FY143_24585 PF00561 alpha/beta hydrolase fold FY143_24590 PF01032 FecCD transport family FY143_24595 PF00005 ABC transporter FY143_24605 PF07715 TonB-dependent Receptor Plug Domain FY143_24605 PF00593 TonB dependent receptor FY143_24610 PF01497 Periplasmic binding protein FY143_24620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_24620 PF03466 LysR substrate binding domain FY143_24625 PF00248 Aldo/keto reductase family FY143_24630 PF03466 LysR substrate binding domain FY143_24630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_24635 PF00107 Zinc-binding dehydrogenase FY143_24635 PF08240 Alcohol dehydrogenase GroES-like domain FY143_24640 PF00356 Bacterial regulatory proteins, lacI family FY143_24640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY143_24645 PF01261 Xylose isomerase-like TIM barrel FY143_24650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_24650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_24655 PF01261 Xylose isomerase-like TIM barrel FY143_24670 PF00005 ABC transporter FY143_24675 PF01032 FecCD transport family FY143_24685 PF00593 TonB dependent receptor FY143_24685 PF07715 TonB-dependent Receptor Plug Domain FY143_24705 PF07238 PilZ domain FY143_24705 PF00535 Glycosyl transferase family 2 FY143_24705 PF03552 Cellulose synthase FY143_24720 PF01717 Cobalamin-independent synthase, Catalytic domain FY143_24720 PF08267 Cobalamin-independent synthase, N-terminal domain FY143_24735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_24735 PF00072 Response regulator receiver domain FY143_24735 PF17149 Periplasmic sensor domain found in signal transduction proteins FY143_24735 PF01627 Hpt domain FY143_24735 PF00512 His Kinase A (phospho-acceptor) domain FY143_24735 PF00672 HAMP domain FY143_24740 PF00072 Response regulator receiver domain FY143_24750 PF02203 Tar ligand binding domain homologue FY143_24750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_24750 PF00672 HAMP domain FY143_24760 PF00155 Aminotransferase class I and II FY143_24765 PF03472 Autoinducer binding domain FY143_24765 PF00196 Bacterial regulatory proteins, luxR family FY143_24775 PF00106 short chain dehydrogenase FY143_24780 PF04198 Putative sugar-binding domain FY143_24785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY143_24785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY143_24790 PF02780 Transketolase, C-terminal domain FY143_24790 PF02779 Transketolase, pyrimidine binding domain FY143_24795 PF00456 Transketolase, thiamine diphosphate binding domain FY143_24800 PF02653 Branched-chain amino acid transport system / permease component FY143_24805 PF13407 Periplasmic binding protein domain FY143_24810 PF00005 ABC transporter FY143_24820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY143_24825 PF00072 Response regulator receiver domain FY143_24825 PF00512 His Kinase A (phospho-acceptor) domain FY143_24825 PF08448 PAS fold FY143_24825 PF13188 PAS domain FY143_24825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_24830 PF06745 KaiC FY143_24835 PF00440 Bacterial regulatory proteins, tetR family FY143_24850 PF07690 Major Facilitator Superfamily FY143_24855 PF01425 Amidase FY143_24870 PF00005 ABC transporter FY143_24875 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24880 PF00528 Binding-protein-dependent transport system inner membrane component FY143_24885 PF17954 Quercetinase C-terminal cupin domain FY143_24885 PF02678 Pirin FY143_24890 PF00857 Isochorismatase family FY143_24895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_24895 PF03466 LysR substrate binding domain FY143_24900 PF01638 HxlR-like helix-turn-helix FY143_24905 PF14765 Polyketide synthase dehydratase FY143_24905 PF00698 Acyl transferase domain FY143_24905 PF08240 Alcohol dehydrogenase GroES-like domain FY143_24905 PF16197 Ketoacyl-synthetase C-terminal extension FY143_24905 PF00109 Beta-ketoacyl synthase, N-terminal domain FY143_24905 PF02801 Beta-ketoacyl synthase, C-terminal domain FY143_24905 PF08659 KR domain FY143_24905 PF00550 Phosphopantetheine attachment site FY143_24905 PF00107 Zinc-binding dehydrogenase FY143_24910 PF03466 LysR substrate binding domain FY143_24910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_24930 PF00175 Oxidoreductase NAD-binding domain FY143_24930 PF00042 Globin FY143_24930 PF00970 Oxidoreductase FAD-binding domain FY143_24935 PF02798 Glutathione S-transferase, N-terminal domain FY143_24940 PF00171 Aldehyde dehydrogenase family FY143_24945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_24945 PF03466 LysR substrate binding domain FY143_24970 PF08220 DeoR-like helix-turn-helix domain FY143_24970 PF00455 DeoR C terminal sensor domain FY143_24975 PF13407 Periplasmic binding protein domain FY143_24980 PF00005 ABC transporter FY143_24985 PF02653 Branched-chain amino acid transport system / permease component FY143_24990 PF02653 Branched-chain amino acid transport system / permease component FY143_25000 PF00294 pfkB family carbohydrate kinase FY143_25000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY143_25005 PF01791 DeoC/LacD family aldolase FY143_25010 PF00171 Aldehyde dehydrogenase family FY143_25015 PF00795 Carbon-nitrogen hydrolase FY143_25020 PF09383 NIL domain FY143_25020 PF00005 ABC transporter FY143_25025 PF00005 ABC transporter FY143_25025 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY143_25035 PF02653 Branched-chain amino acid transport system / permease component FY143_25040 PF13458 Periplasmic binding protein FY143_25055 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY143_25060 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY143_25065 PF00459 Inositol monophosphatase family FY143_25080 PF01546 Peptidase family M20/M25/M40 FY143_25085 PF00455 DeoR C terminal sensor domain FY143_25085 PF08220 DeoR-like helix-turn-helix domain FY143_25090 PF00005 ABC transporter FY143_25090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_25095 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_25095 PF00528 Binding-protein-dependent transport system inner membrane component FY143_25100 PF00528 Binding-protein-dependent transport system inner membrane component FY143_25105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_25110 PF17912 MalK OB fold domain FY143_25110 PF00005 ABC transporter FY143_25115 PF00107 Zinc-binding dehydrogenase FY143_25115 PF08240 Alcohol dehydrogenase GroES-like domain FY143_25120 PF00528 Binding-protein-dependent transport system inner membrane component FY143_25125 PF00528 Binding-protein-dependent transport system inner membrane component FY143_25130 PF01547 Bacterial extracellular solute-binding protein FY143_25145 PF12833 Helix-turn-helix domain FY143_25150 PF00593 TonB dependent receptor FY143_25150 PF07715 TonB-dependent Receptor Plug Domain FY143_25155 PF00183 Hsp90 protein FY143_25160 PF13649 Methyltransferase domain FY143_25165 PF01161 Phosphatidylethanolamine-binding protein FY143_25175 PF00664 ABC transporter transmembrane region FY143_25175 PF00005 ABC transporter FY143_25180 PF12900 Pyridoxamine 5'-phosphate oxidase FY143_25205 PF08240 Alcohol dehydrogenase GroES-like domain FY143_25205 PF00107 Zinc-binding dehydrogenase FY143_25245 PF16925 Tetracyclin repressor-like, C-terminal domain FY143_25245 PF00440 Bacterial regulatory proteins, tetR family FY143_25275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_25275 PF03466 LysR substrate binding domain FY143_25280 PF00248 Aldo/keto reductase family FY143_25315 PF00313 'Cold-shock' DNA-binding domain FY143_25325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_25325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_25330 PF00005 ABC transporter FY143_25335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_25340 PF00356 Bacterial regulatory proteins, lacI family FY143_25355 PF07729 FCD domain FY143_25355 PF00392 Bacterial regulatory proteins, gntR family FY143_25360 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_25360 PF04324 BFD-like [2Fe-2S] binding domain FY143_25370 PF01266 FAD dependent oxidoreductase FY143_25380 PF01958 Domain of unknown function DUF108 FY143_25380 PF03447 Homoserine dehydrogenase, NAD binding domain FY143_25385 PF01042 Endoribonuclease L-PSP FY143_25390 PF02371 Transposase IS116/IS110/IS902 family FY143_25390 PF01548 Transposase FY143_25430 PF00857 Isochorismatase family FY143_25440 PF00440 Bacterial regulatory proteins, tetR family FY143_25445 PF00005 ABC transporter FY143_25450 PF01032 FecCD transport family FY143_25455 PF01032 FecCD transport family FY143_25465 PF07732 Multicopper oxidase FY143_25465 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY143_25465 PF00394 Multicopper oxidase FY143_25465 PF07731 Multicopper oxidase FY143_25470 PF02885 Glycosyl transferase family, helical bundle domain FY143_25470 PF00591 Glycosyl transferase family, a/b domain FY143_25475 PF07715 TonB-dependent Receptor Plug Domain FY143_25475 PF00593 TonB dependent receptor FY143_25515 PF03551 Transcriptional regulator PadR-like family FY143_25550 PF07732 Multicopper oxidase FY143_25550 PF00394 Multicopper oxidase FY143_25550 PF07731 Multicopper oxidase FY143_25575 PF01209 ubiE/COQ5 methyltransferase family FY143_25580 PF03466 LysR substrate binding domain FY143_25580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_25585 PF17954 Quercetinase C-terminal cupin domain FY143_25585 PF02678 Pirin FY143_25590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_25600 PF00857 Isochorismatase family FY143_25610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY143_25645 PF01734 Patatin-like phospholipase FY143_25650 PF01381 Helix-turn-helix FY143_25660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_25660 PF03466 LysR substrate binding domain FY143_25665 PF00296 Luciferase-like monooxygenase FY143_25670 PF00296 Luciferase-like monooxygenase FY143_25680 PF00528 Binding-protein-dependent transport system inner membrane component FY143_25685 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_25685 PF00528 Binding-protein-dependent transport system inner membrane component FY143_25690 PF00005 ABC transporter FY143_25690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_25695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_25700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY143_25700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY143_25705 PF00753 Metallo-beta-lactamase superfamily FY143_25715 PF00005 ABC transporter FY143_25720 PF02653 Branched-chain amino acid transport system / permease component FY143_25730 PF01381 Helix-turn-helix FY143_25755 PF06100 MCRA family FY143_25780 PF09084 NMT1/THI5 like FY143_25790 PF00005 ABC transporter FY143_25795 PF03466 LysR substrate binding domain FY143_25795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_25845 PF02463 RecF/RecN/SMC N terminal domain FY143_25855 PF04079 Segregation and condensation complex subunit ScpB FY143_25875 PF00589 Phage integrase family FY143_25885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_25900 PF13614 AAA domain FY143_25900 PF00376 MerR family regulatory protein FY143_25905 PF02195 ParB-like nuclease domain FY143_25905 PF07506 RepB plasmid partitioning protein FY143_25910 PF11800 Replication protein C C-terminal region FY143_25910 PF03428 Replication protein C N-terminal domain FY143_25970 PF02195 ParB-like nuclease domain FY143_25970 PF17762 HTH domain found in ParB protein FY143_26010 PF08401 Domain of unknown function (DUF1738) FY143_26010 PF18818 Metallopeptidase superfamily domain FY143_26020 PF08808 RES domain FY143_26030 PF05284 Protein of unknown function (DUF736) FY143_26035 PF00216 Bacterial DNA-binding protein FY143_26040 PF05406 WGR domain FY143_26065 PF01638 HxlR-like helix-turn-helix FY143_26080 PF00106 short chain dehydrogenase FY143_26105 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY143_26110 PF01464 Transglycosylase SLT domain FY143_26110 PF10145 Phage-related minor tail protein FY143_26110 PF01551 Peptidase family M23 FY143_26140 PF03743 Bacterial conjugation TrbI-like protein FY143_26145 PF00437 Type II/IV secretion system protein FY143_26150 PF02534 Type IV secretory system Conjugative DNA transfer FY143_26210 PF13614 AAA domain FY143_26235 PF00765 Autoinducer synthase FY143_26240 PF03472 Autoinducer binding domain FY143_26240 PF00196 Bacterial regulatory proteins, luxR family FY143_26255 PF00682 HMGL-like FY143_26255 PF02436 Conserved carboxylase domain FY143_26255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY143_26255 PF00364 Biotin-requiring enzyme FY143_26255 PF00289 Biotin carboxylase, N-terminal domain FY143_26255 PF02785 Biotin carboxylase C-terminal domain FY143_26260 PF14552 Tautomerase enzyme FY143_26265 PF03328 HpcH/HpaI aldolase/citrate lyase family FY143_26270 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY143_26280 PF09339 IclR helix-turn-helix domain FY143_26280 PF01614 Bacterial transcriptional regulator FY143_26290 PF00005 ABC transporter FY143_26295 PF00005 ABC transporter FY143_26305 PF11862 Domain of unknown function (DUF3382) FY143_26305 PF02653 Branched-chain amino acid transport system / permease component FY143_26335 PF08502 LeuA allosteric (dimerisation) domain FY143_26335 PF00682 HMGL-like FY143_26340 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26345 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26350 PF00480 ROK family FY143_26350 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY143_26355 PF00128 Alpha amylase, catalytic domain FY143_26360 PF01546 Peptidase family M20/M25/M40 FY143_26360 PF07687 Peptidase dimerisation domain FY143_26370 PF17912 MalK OB fold domain FY143_26370 PF00005 ABC transporter FY143_26380 PF00480 ROK family FY143_26385 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26390 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY143_26400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY143_26415 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY143_26430 PF00005 ABC transporter FY143_26435 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26440 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26445 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY143_26450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_26450 PF00005 ABC transporter FY143_26455 PF00005 ABC transporter FY143_26455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_26460 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26460 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_26465 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_26475 PF03737 Aldolase/RraA FY143_26480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_26480 PF03466 LysR substrate binding domain FY143_26485 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY143_26490 PF07687 Peptidase dimerisation domain FY143_26490 PF01546 Peptidase family M20/M25/M40 FY143_26495 PF01156 Inosine-uridine preferring nucleoside hydrolase FY143_26505 PF00440 Bacterial regulatory proteins, tetR family FY143_26515 PF00857 Isochorismatase family FY143_26530 PF02678 Pirin FY143_26530 PF17954 Quercetinase C-terminal cupin domain FY143_26550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY143_26555 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY143_26560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY143_26560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY143_26620 PF00561 alpha/beta hydrolase fold FY143_26640 PF13533 Biotin-lipoyl like FY143_26645 PF03466 LysR substrate binding domain FY143_26645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_26650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_26655 PF03466 LysR substrate binding domain FY143_26655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_26670 PF00857 Isochorismatase family FY143_26675 PF03466 LysR substrate binding domain FY143_26675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_26690 PF01494 FAD binding domain FY143_26695 PF13193 AMP-binding enzyme C-terminal domain FY143_26695 PF00501 AMP-binding enzyme FY143_26700 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY143_26705 PF13417 Glutathione S-transferase, N-terminal domain FY143_26710 PF07883 Cupin domain FY143_26725 PF03466 LysR substrate binding domain FY143_26725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_26735 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FY143_26735 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FY143_26740 PF06574 FAD synthetase FY143_26745 PF01613 Flavin reductase like domain FY143_26750 PF00171 Aldehyde dehydrogenase family FY143_26755 PF00701 Dihydrodipicolinate synthetase family FY143_26760 PF01323 DSBA-like thioredoxin domain FY143_26790 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY143_26790 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FY143_26795 PF02371 Transposase IS116/IS110/IS902 family FY143_26795 PF01548 Transposase FY143_26805 PF13592 Winged helix-turn helix FY143_26820 PF03466 LysR substrate binding domain FY143_26820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_26830 PF02678 Pirin FY143_26830 PF17954 Quercetinase C-terminal cupin domain FY143_26835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY143_26855 PF08021 Siderophore-interacting FAD-binding domain FY143_26855 PF04954 Siderophore-interacting protein FY143_26860 PF03928 Haem-degrading FY143_26880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_26885 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26890 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26890 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_26895 PF00005 ABC transporter FY143_26895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_26905 PF00296 Luciferase-like monooxygenase FY143_26915 PF00528 Binding-protein-dependent transport system inner membrane component FY143_26920 PF00005 ABC transporter FY143_26925 PF05199 GMC oxidoreductase FY143_26925 PF00732 GMC oxidoreductase FY143_26930 PF00171 Aldehyde dehydrogenase family FY143_26935 PF13614 AAA domain FY143_26940 PF07506 RepB plasmid partitioning protein FY143_26940 PF02195 ParB-like nuclease domain FY143_26945 PF11800 Replication protein C C-terminal region FY143_26945 PF03428 Replication protein C N-terminal domain FY143_26950 PF00239 Resolvase, N terminal domain FY143_26955 PF00589 Phage integrase family FY143_26965 PF04079 Segregation and condensation complex subunit ScpB FY143_26985 PF07756 Protein of unknown function (DUF1612) FY143_26985 PF11972 HTH DNA binding domain FY143_27045 PF13298 DNA polymerase Ligase (LigD) FY143_27045 PF04679 ATP dependent DNA ligase C terminal region FY143_27045 PF01068 ATP dependent DNA ligase domain FY143_27060 PF02811 PHP domain FY143_27060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY143_27060 PF14579 Helix-hairpin-helix motif FY143_27060 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY143_27100 PF02195 ParB-like nuclease domain FY143_27100 PF17762 HTH domain found in ParB protein FY143_27110 PF03466 LysR substrate binding domain FY143_27110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_27115 PF00009 Elongation factor Tu GTP binding domain FY143_27135 PF00925 GTP cyclohydrolase II FY143_27170 PF05284 Protein of unknown function (DUF736) FY143_27210 PF05284 Protein of unknown function (DUF736) FY143_27215 PF00216 Bacterial DNA-binding protein FY143_27235 PF02534 Type IV secretory system Conjugative DNA transfer FY143_27240 PF06412 Conjugal transfer protein TraD FY143_27245 PF07820 TraC-like protein FY143_27250 PF03389 MobA/MobL family FY143_27250 PF01443 Viral (Superfamily 1) RNA helicase FY143_27250 PF17841 BID domain of Bartonella effector protein (Bep) FY143_27255 PF10502 Signal peptidase, peptidase S26 FY143_27260 PF00795 Carbon-nitrogen hydrolase FY143_27265 PF06871 TraH_2 FY143_27270 PF09228 Prokaryotic Transcriptional repressor TraM FY143_27275 PF13426 PAS domain FY143_27275 PF08447 PAS fold FY143_27275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY143_27285 PF03472 Autoinducer binding domain FY143_27285 PF00196 Bacterial regulatory proteins, luxR family FY143_27290 PF00128 Alpha amylase, catalytic domain FY143_27295 PF02690 Na+/Pi-cotransporter FY143_27305 PF00455 DeoR C terminal sensor domain FY143_27305 PF08220 DeoR-like helix-turn-helix domain FY143_27310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_27315 PF00005 ABC transporter FY143_27315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_27320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_27320 PF00005 ABC transporter FY143_27325 PF00528 Binding-protein-dependent transport system inner membrane component FY143_27330 PF00528 Binding-protein-dependent transport system inner membrane component FY143_27330 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_27335 PF03009 Glycerophosphoryl diester phosphodiesterase family FY143_27340 PF00459 Inositol monophosphatase family FY143_27355 PF01202 Shikimate kinase FY143_27370 PF02899 Phage integrase, N-terminal SAM-like domain FY143_27370 PF00589 Phage integrase family FY143_27385 PF00067 Cytochrome P450 FY143_27390 PF00067 Cytochrome P450 FY143_27410 PF06903 VirK protein FY143_27425 PF05717 IS66 Orf2 like protein FY143_27430 PF03050 Transposase IS66 family FY143_27430 PF13817 IS66 C-terminal element FY143_27430 PF13007 Transposase C of IS166 homeodomain FY143_27430 PF13005 zinc-finger binding domain of transposase IS66 FY143_27475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY143_27475 PF00512 His Kinase A (phospho-acceptor) domain FY143_27480 PF01464 Transglycosylase SLT domain FY143_27485 PF04956 TrbC/VIRB2 family FY143_27490 PF05101 Type IV secretory pathway, VirB3-like protein FY143_27495 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY143_27505 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY143_27510 PF17413 Outer membrane lipoprotein virB7 FY143_27515 PF04335 VirB8 protein FY143_27520 PF03524 Conjugal transfer protein FY143_27525 PF03743 Bacterial conjugation TrbI-like protein FY143_27530 PF00437 Type II/IV secretion system protein FY143_27535 PF00072 Response regulator receiver domain FY143_27535 PF00486 Transcriptional regulatory protein, C terminal FY143_27540 PF07181 VirC2 protein FY143_27545 PF07015 VirC1 protein FY143_27550 PF07328 T-DNA border endonuclease VirD1 FY143_27555 PF03432 Relaxase/Mobilisation nuclease domain FY143_27565 PF02534 Type IV secretory system Conjugative DNA transfer FY143_27585 PF12189 Single-strand DNA-binding protein FY143_27590 PF07229 VirE2 FY143_27610 PF05717 IS66 Orf2 like protein FY143_27615 PF00196 Bacterial regulatory proteins, luxR family FY143_27615 PF03472 Autoinducer binding domain FY143_27630 PF00459 Inositol monophosphatase family FY143_27665 PF02027 RolB/RolC glucosidase family FY143_27670 PF01425 Amidase FY143_27675 PF02027 RolB/RolC glucosidase family FY143_27675 PF01593 Flavin containing amine oxidoreductase FY143_27685 PF02027 RolB/RolC glucosidase family FY143_27690 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY143_27700 PF00005 ABC transporter FY143_27700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY143_27705 PF00528 Binding-protein-dependent transport system inner membrane component FY143_27705 PF12911 N-terminal TM domain of oligopeptide transport permease C FY143_27710 PF00528 Binding-protein-dependent transport system inner membrane component FY143_27715 PF01266 FAD dependent oxidoreductase FY143_27720 PF17806 Sarcosine oxidase A3 domain FY143_27720 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY143_27730 PF01266 FAD dependent oxidoreductase FY143_27735 PF03466 LysR substrate binding domain FY143_27735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_27740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY143_27745 PF01968 Hydantoinase/oxoprolinase FY143_27745 PF05378 Hydantoinase/oxoprolinase N-terminal region FY143_27755 PF00710 Asparaginase, N-terminal FY143_27755 PF17763 Glutaminase/Asparaginase C-terminal domain FY143_27760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY143_27760 PF03466 LysR substrate binding domain FY143_27770 PF00528 Binding-protein-dependent transport system inner membrane component FY143_27780 PF00005 ABC transporter FY143_27780 PF08402 TOBE domain FY143_27790 PF03743 Bacterial conjugation TrbI-like protein FY143_27800 PF03524 Conjugal transfer protein FY143_27805 PF04335 VirB8 protein FY143_27810 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY143_27815 PF10907 Protein of unknown function (DUF2749) FY143_27825 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY143_27830 PF05101 Type IV secretory pathway, VirB3-like protein FY143_27835 PF04956 TrbC/VIRB2 family FY143_27840 PF00437 Type II/IV secretion system protein FY143_27845 PF00765 Autoinducer synthase FY143_27850 PF17841 BID domain of Bartonella effector protein (Bep) FY143_27850 PF03389 MobA/MobL family FY143_27850 PF01443 Viral (Superfamily 1) RNA helicase FY143_27865 PF02534 Type IV secretory system Conjugative DNA transfer FY143_27885 PF00990 Diguanylate cyclase, GGDEF domain FY143_27885 PF00563 EAL domain FY143_27885 PF03707 Bacterial signalling protein N terminal repeat FY143_27920 PF17762 HTH domain found in ParB protein FY143_27920 PF02195 ParB-like nuclease domain FY143_27935 PF02796 Helix-turn-helix domain of resolvase FY143_27935 PF00239 Resolvase, N terminal domain