locus-tag class description FY144_00005 PF00308 Bacterial dnaA protein FY144_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY144_00005 PF11638 DnaA N-terminal domain FY144_00010 PF06969 HemN C-terminal domain FY144_00010 PF04055 Radical SAM superfamily FY144_00015 PF01725 Ham1 family FY144_00020 PF01138 3' exoribonuclease family, domain 1 FY144_00020 PF03725 3' exoribonuclease family, domain 2 FY144_00025 PF01628 HrcA protein C terminal domain FY144_00030 PF01025 GrpE FY144_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY144_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY144_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY144_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY144_00045 PF04963 Sigma-54 factor, core binding domain FY144_00045 PF04552 Sigma-54, DNA binding domain FY144_00050 PF00005 ABC transporter FY144_00055 PF03968 OstA-like protein FY144_00065 PF01343 Peptidase family S49 FY144_00070 PF00216 Bacterial DNA-binding protein FY144_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY144_00080 PF17785 PUA-like domain FY144_00085 PF00588 SpoU rRNA Methylase family FY144_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY144_00090 PF01252 Signal peptidase (SPase) II FY144_00095 PF00072 Response regulator receiver domain FY144_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY144_00095 PF01627 Hpt domain FY144_00095 PF00512 His Kinase A (phospho-acceptor) domain FY144_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_00095 PF00672 HAMP domain FY144_00105 PF01624 MutS domain I FY144_00105 PF05188 MutS domain II FY144_00105 PF05192 MutS domain III FY144_00105 PF05190 MutS family domain IV FY144_00105 PF00488 MutS domain V FY144_00110 PF08335 GlnD PII-uridylyltransferase FY144_00110 PF01966 HD domain FY144_00110 PF01842 ACT domain FY144_00110 PF01909 Nucleotidyltransferase domain FY144_00115 PF03023 Lipid II flippase MurJ FY144_00125 PF00579 tRNA synthetases class I (W and Y) FY144_00135 PF01106 NifU-like domain FY144_00140 PF00814 Glycoprotease family FY144_00150 PF01475 Ferric uptake regulator family FY144_00155 PF01553 Acyltransferase FY144_00160 PF04055 Radical SAM superfamily FY144_00160 PF01938 TRAM domain FY144_00160 PF00919 Uncharacterized protein family UPF0004 FY144_00165 PF02562 PhoH-like protein FY144_00170 PF02130 Uncharacterized protein family UPF0054 FY144_00175 PF03471 Transporter associated domain FY144_00175 PF00571 CBS domain FY144_00180 PF00795 Carbon-nitrogen hydrolase FY144_00185 PF01381 Helix-turn-helix FY144_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY144_00190 PF02772 S-adenosylmethionine synthetase, central domain FY144_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY144_00195 PF02390 Putative methyltransferase FY144_00200 PF00294 pfkB family carbohydrate kinase FY144_00205 PF02646 RmuC family FY144_00210 PF01327 Polypeptide deformylase FY144_00215 PF02911 Formyl transferase, C-terminal domain FY144_00215 PF00551 Formyl transferase FY144_00220 PF01416 tRNA pseudouridine synthase FY144_00230 PF01546 Peptidase family M20/M25/M40 FY144_00230 PF07687 Peptidase dimerisation domain FY144_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY144_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY144_00245 PF00672 HAMP domain FY144_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY144_00255 PF00011 Hsp20/alpha crystallin family FY144_00280 PF00696 Amino acid kinase family FY144_00290 PF01926 50S ribosome-binding GTPase FY144_00295 PF14849 YidC periplasmic domain FY144_00295 PF02096 60Kd inner membrane protein FY144_00300 PF00825 Ribonuclease P FY144_00305 PF00468 Ribosomal protein L34 FY144_00310 PF00672 HAMP domain FY144_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_00315 PF00512 His Kinase A (phospho-acceptor) domain FY144_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_00325 PF01209 ubiE/COQ5 methyltransferase family FY144_00330 PF00005 ABC transporter FY144_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY144_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY144_00350 PF00149 Calcineurin-like phosphoesterase FY144_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY144_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY144_00365 PF05544 Proline racemase FY144_00370 PF01979 Amidohydrolase family FY144_00375 PF00156 Phosphoribosyl transferase domain FY144_00380 PF00294 pfkB family carbohydrate kinase FY144_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY144_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY144_00400 PF00342 Phosphoglucose isomerase FY144_00405 PF00501 AMP-binding enzyme FY144_00405 PF13193 AMP-binding enzyme C-terminal domain FY144_00410 PF00005 ABC transporter FY144_00410 PF08402 TOBE domain FY144_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY144_00425 PF07715 TonB-dependent Receptor Plug Domain FY144_00425 PF00593 TonB dependent receptor FY144_00445 PF01679 Proteolipid membrane potential modulator FY144_00460 PF13274 Protein of unknown function (DUF4065) FY144_00465 PF03793 PASTA domain FY144_00465 PF00069 Protein kinase domain FY144_00470 PF03793 PASTA domain FY144_00470 PF00069 Protein kinase domain FY144_00480 PF02796 Helix-turn-helix domain of resolvase FY144_00480 PF00239 Resolvase, N terminal domain FY144_00520 PF03976 Polyphosphate kinase 2 (PPK2) FY144_00525 PF00512 His Kinase A (phospho-acceptor) domain FY144_00525 PF16736 Single Cache-like FY144_00525 PF00989 PAS fold FY144_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_00530 PF12849 PBP superfamily domain FY144_00535 PF00528 Binding-protein-dependent transport system inner membrane component FY144_00540 PF00528 Binding-protein-dependent transport system inner membrane component FY144_00545 PF00005 ABC transporter FY144_00550 PF01895 PhoU domain FY144_00555 PF00072 Response regulator receiver domain FY144_00555 PF00486 Transcriptional regulatory protein, C terminal FY144_00565 PF00202 Aminotransferase class-III FY144_00570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY144_00570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY144_00575 PF01430 Hsp33 protein FY144_00580 PF04379 ApaG domain FY144_00585 PF01053 Cys/Met metabolism PLP-dependent enzyme FY144_00595 PF00692 dUTPase FY144_00605 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY144_00610 PF00230 Major intrinsic protein FY144_00650 PF00196 Bacterial regulatory proteins, luxR family FY144_00650 PF00072 Response regulator receiver domain FY144_00660 PF01180 Dihydroorotate dehydrogenase FY144_00675 PF08241 Methyltransferase domain FY144_00695 PF02082 Transcriptional regulator FY144_00700 PF00270 DEAD/DEAH box helicase FY144_00700 PF00271 Helicase conserved C-terminal domain FY144_00700 PF08494 DEAD/H associated FY144_00720 PF01925 Sulfite exporter TauE/SafE FY144_00730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_00730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY144_00730 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY144_00730 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_00735 PF02803 Thiolase, C-terminal domain FY144_00735 PF00108 Thiolase, N-terminal domain FY144_00740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY144_00740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY144_00740 PF00378 Enoyl-CoA hydratase/isomerase FY144_00765 PF03334 Na+/H+ antiporter subunit FY144_00770 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY144_00775 PF01899 Na+/H+ ion antiporter subunit FY144_00780 PF00361 Proton-conducting membrane transporter FY144_00785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY144_00790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY144_00790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY144_00790 PF00361 Proton-conducting membrane transporter FY144_00790 PF13244 Domain of unknown function (DUF4040) FY144_00800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_00810 PF00072 Response regulator receiver domain FY144_00815 PF01584 CheW-like domain FY144_00815 PF02895 Signal transducing histidine kinase, homodimeric domain FY144_00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_00815 PF01627 Hpt domain FY144_00820 PF01739 CheR methyltransferase, SAM binding domain FY144_00820 PF03705 CheR methyltransferase, all-alpha domain FY144_00825 PF00072 Response regulator receiver domain FY144_00825 PF01339 CheB methylesterase FY144_00830 PF00072 Response regulator receiver domain FY144_00835 PF03975 CheD chemotactic sensory transduction FY144_00845 PF08345 Flagellar M-ring protein C-terminal FY144_00845 PF01514 Secretory protein of YscJ/FliF family FY144_00850 PF00196 Bacterial regulatory proteins, luxR family FY144_00850 PF03472 Autoinducer binding domain FY144_00860 PF00672 HAMP domain FY144_00860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_00865 PF01627 Hpt domain FY144_00865 PF00072 Response regulator receiver domain FY144_00865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_00865 PF00672 HAMP domain FY144_00865 PF00512 His Kinase A (phospho-acceptor) domain FY144_00870 PF01741 Large-conductance mechanosensitive channel, MscL FY144_00875 PF00155 Aminotransferase class I and II FY144_00880 PF01370 NAD dependent epimerase/dehydratase family FY144_00890 PF03884 DNA gyrase inhibitor YacG FY144_00895 PF02545 Maf-like protein FY144_00900 PF01176 Translation initiation factor 1A / IF-1 FY144_00910 PF06793 Uncharacterised protein family (UPF0262) FY144_00915 PF00815 Histidinol dehydrogenase FY144_00925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY144_00940 PF00669 Bacterial flagellin N-terminal helical region FY144_00940 PF00700 Bacterial flagellin C-terminal helical region FY144_00945 PF00669 Bacterial flagellin N-terminal helical region FY144_00945 PF00700 Bacterial flagellin C-terminal helical region FY144_00950 PF00669 Bacterial flagellin N-terminal helical region FY144_00950 PF00700 Bacterial flagellin C-terminal helical region FY144_00955 PF00813 FliP family FY144_00965 PF02107 Flagellar L-ring protein FY144_00975 PF02119 Flagellar P-ring protein FY144_00980 PF13144 Chaperone for flagella basal body P-ring formation FY144_00985 PF00460 Flagella basal body rod protein FY144_00985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY144_00990 PF02049 Flagellar hook-basal body complex protein FliE FY144_00995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY144_01000 PF00460 Flagella basal body rod protein FY144_01010 PF18269 T3SS EscN ATPase C-terminal domain FY144_01010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY144_01015 PF00460 Flagella basal body rod protein FY144_01015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY144_01025 PF01618 MotA/TolQ/ExbB proton channel family FY144_01030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY144_01035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY144_01040 PF01706 FliG C-terminal domain FY144_01040 PF14841 FliG middle domain FY144_01040 PF14842 FliG N-terminal domain FY144_01045 PF01312 FlhB HrpN YscU SpaS Family FY144_01055 PF00669 Bacterial flagellin N-terminal helical region FY144_01055 PF00700 Bacterial flagellin C-terminal helical region FY144_01065 PF00691 OmpA family FY144_01065 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY144_01075 PF02120 Flagellar hook-length control protein FliK FY144_01085 PF00486 Transcriptional regulatory protein, C terminal FY144_01090 PF07559 Flagellar basal body protein FlaE FY144_01090 PF00460 Flagella basal body rod protein FY144_01090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY144_01110 PF07378 Flagellar protein FlbT FY144_01115 PF03963 Flagellar hook capping protein - N-terminal region FY144_01120 PF01313 Bacterial export proteins, family 3 FY144_01125 PF00771 FHIPEP family FY144_01130 PF01311 Bacterial export proteins, family 1 FY144_01165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY144_01165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY144_01170 PF00356 Bacterial regulatory proteins, lacI family FY144_01175 PF01547 Bacterial extracellular solute-binding protein FY144_01180 PF00528 Binding-protein-dependent transport system inner membrane component FY144_01185 PF00528 Binding-protein-dependent transport system inner membrane component FY144_01190 PF00128 Alpha amylase, catalytic domain FY144_01195 PF17912 MalK OB fold domain FY144_01195 PF03459 TOBE domain FY144_01195 PF00005 ABC transporter FY144_01210 PF00920 Dehydratase family FY144_01215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY144_01220 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY144_01220 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY144_01225 PF01266 FAD dependent oxidoreductase FY144_01230 PF00120 Glutamine synthetase, catalytic domain FY144_01255 PF00463 Isocitrate lyase family FY144_01260 PF01381 Helix-turn-helix FY144_01260 PF06114 IrrE N-terminal-like domain FY144_01260 PF09856 Predicted transcriptional regulator (DUF2083) FY144_01265 PF13416 Bacterial extracellular solute-binding protein FY144_01270 PF00005 ABC transporter FY144_01270 PF08402 TOBE domain FY144_01275 PF00528 Binding-protein-dependent transport system inner membrane component FY144_01280 PF00528 Binding-protein-dependent transport system inner membrane component FY144_01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_01290 PF00512 His Kinase A (phospho-acceptor) domain FY144_01290 PF13188 PAS domain FY144_01290 PF13426 PAS domain FY144_01290 PF00989 PAS fold FY144_01300 PF02541 Ppx/GppA phosphatase family FY144_01305 PF01728 FtsJ-like methyltransferase FY144_01310 PF07690 Major Facilitator Superfamily FY144_01315 PF00753 Metallo-beta-lactamase superfamily FY144_01320 PF00571 CBS domain FY144_01320 PF00478 IMP dehydrogenase / GMP reductase domain FY144_01330 PF08240 Alcohol dehydrogenase GroES-like domain FY144_01330 PF00107 Zinc-binding dehydrogenase FY144_01335 PF01738 Dienelactone hydrolase family FY144_01340 PF00994 Probable molybdopterin binding domain FY144_01345 PF08544 GHMP kinases C terminal FY144_01345 PF00288 GHMP kinases N terminal domain FY144_01355 PF00348 Polyprenyl synthetase FY144_01370 PF06965 Na+/H+ antiporter 1 FY144_01370 PF01343 Peptidase family S49 FY144_01380 PF02091 Glycyl-tRNA synthetase alpha subunit FY144_01390 PF04011 LemA family FY144_01395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY144_01405 PF02092 Glycyl-tRNA synthetase beta subunit FY144_01405 PF05746 DALR anticodon binding domain FY144_01410 PF04463 Protein of unknown function (DUF523) FY144_01415 PF00672 HAMP domain FY144_01415 PF17200 Single Cache domain 2 FY144_01415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_01425 PF02844 Phosphoribosylglycinamide synthetase, N domain FY144_01425 PF02843 Phosphoribosylglycinamide synthetase, C domain FY144_01425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY144_01430 PF09371 Tex-like protein N-terminal domain FY144_01430 PF16921 Tex protein YqgF-like domain FY144_01430 PF17674 HHH domain FY144_01430 PF00575 S1 RNA binding domain FY144_01445 PF01040 UbiA prenyltransferase family FY144_01460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_01460 PF03466 LysR substrate binding domain FY144_01470 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY144_01475 PF04452 RNA methyltransferase FY144_01480 PF01384 Phosphate transporter family FY144_01490 PF05116 Sucrose-6F-phosphate phosphohydrolase FY144_01495 PF13439 Glycosyltransferase Family 4 FY144_01495 PF00534 Glycosyl transferases group 1 FY144_01500 PF07729 FCD domain FY144_01500 PF00392 Bacterial regulatory proteins, gntR family FY144_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_01510 PF03466 LysR substrate binding domain FY144_01515 PF02913 FAD linked oxidases, C-terminal domain FY144_01515 PF01565 FAD binding domain FY144_01525 PF13183 4Fe-4S dicluster domain FY144_01525 PF02754 Cysteine-rich domain FY144_01535 PF17969 L,D-transpeptidase C-terminal domain FY144_01535 PF03734 L,D-transpeptidase catalytic domain FY144_01540 PF03352 Methyladenine glycosylase FY144_01550 PF03601 Conserved hypothetical protein 698 FY144_01555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_01555 PF03466 LysR substrate binding domain FY144_01585 PF03129 Anticodon binding domain FY144_01585 PF13393 Histidyl-tRNA synthetase FY144_01595 PF13393 Histidyl-tRNA synthetase FY144_01600 PF01634 ATP phosphoribosyltransferase FY144_01605 PF07681 DoxX FY144_01615 PF00118 TCP-1/cpn60 chaperonin family FY144_01620 PF00166 Chaperonin 10 Kd subunit FY144_01630 PF06574 FAD synthetase FY144_01630 PF01687 Riboflavin kinase FY144_01635 PF00133 tRNA synthetases class I (I, L, M and V) FY144_01635 PF08264 Anticodon-binding domain of tRNA FY144_01645 PF14437 MafB19-like deaminase FY144_01650 PF00849 RNA pseudouridylate synthase FY144_01650 PF01479 S4 domain FY144_01660 PF01734 Patatin-like phospholipase FY144_01665 PF00999 Sodium/hydrogen exchanger family FY144_01665 PF02254 TrkA-N domain FY144_01670 PF01523 Putative modulator of DNA gyrase FY144_01675 PF00459 Inositol monophosphatase family FY144_01685 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY144_01685 PF00534 Glycosyl transferases group 1 FY144_01695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY144_01710 PF01119 DNA mismatch repair protein, C-terminal domain FY144_01710 PF08676 MutL C terminal dimerisation domain FY144_01715 PF00486 Transcriptional regulatory protein, C terminal FY144_01715 PF00072 Response regulator receiver domain FY144_01720 PF00563 EAL domain FY144_01720 PF13188 PAS domain FY144_01720 PF03707 Bacterial signalling protein N terminal repeat FY144_01720 PF00990 Diguanylate cyclase, GGDEF domain FY144_01725 PF08450 SMP-30/Gluconolactonase/LRE-like region FY144_01730 PF01081 KDPG and KHG aldolase FY144_01735 PF05035 2-keto-3-deoxy-galactonokinase FY144_01745 PF01614 Bacterial transcriptional regulator FY144_01745 PF09339 IclR helix-turn-helix domain FY144_01750 PF00196 Bacterial regulatory proteins, luxR family FY144_01750 PF03472 Autoinducer binding domain FY144_01760 PF10609 NUBPL iron-transfer P-loop NTPase FY144_01765 PF01544 CorA-like Mg2+ transporter protein FY144_01770 PF02705 K+ potassium transporter FY144_01785 PF00119 ATP synthase A chain FY144_01790 PF00137 ATP synthase subunit C FY144_01795 PF00430 ATP synthase B/B' CF(0) FY144_01800 PF00430 ATP synthase B/B' CF(0) FY144_01805 PF09828 Chromate resistance exported protein FY144_01810 PF02417 Chromate transporter FY144_01815 PF01351 Ribonuclease HII FY144_01830 PF02913 FAD linked oxidases, C-terminal domain FY144_01830 PF01565 FAD binding domain FY144_01835 PF03481 Putative GTP-binding controlling metal-binding FY144_01835 PF01300 Telomere recombination FY144_01845 PF00355 Rieske [2Fe-2S] domain FY144_01845 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY144_01850 PF00970 Oxidoreductase FAD-binding domain FY144_01850 PF00111 2Fe-2S iron-sulfur cluster binding domain FY144_01850 PF00175 Oxidoreductase NAD-binding domain FY144_01855 PF07886 BA14K-like protein FY144_01860 PF07886 BA14K-like protein FY144_01870 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY144_01870 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_01870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_01870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY144_01885 PF05958 tRNA (Uracil-5-)-methyltransferase FY144_01890 PF01479 S4 domain FY144_01890 PF01728 FtsJ-like methyltransferase FY144_01895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_01895 PF02203 Tar ligand binding domain homologue FY144_01895 PF00672 HAMP domain FY144_01905 PF01037 Lrp/AsnC ligand binding domain FY144_01930 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY144_01930 PF02779 Transketolase, pyrimidine binding domain FY144_01930 PF02780 Transketolase, C-terminal domain FY144_01935 PF02678 Pirin FY144_01935 PF05726 Pirin C-terminal cupin domain FY144_01940 PF02609 Exonuclease VII small subunit FY144_01945 PF00850 Histone deacetylase domain FY144_01950 PF02632 BioY family FY144_01955 PF02361 Cobalt transport protein FY144_01960 PF00005 ABC transporter FY144_01965 PF06224 Winged helix DNA-binding domain FY144_01970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY144_01970 PF00925 GTP cyclohydrolase II FY144_01975 PF01264 Chorismate synthase FY144_01990 PF00300 Histidine phosphatase superfamily (branch 1) FY144_02000 PF00684 DnaJ central domain FY144_02000 PF01556 DnaJ C terminal domain FY144_02000 PF00226 DnaJ domain FY144_02010 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY144_02010 PF01243 Pyridoxamine 5'-phosphate oxidase FY144_02030 PF13419 Haloacid dehalogenase-like hydrolase FY144_02040 PF01523 Putative modulator of DNA gyrase FY144_02050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY144_02050 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY144_02055 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY144_02060 PF01040 UbiA prenyltransferase family FY144_02065 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY144_02070 PF00510 Cytochrome c oxidase subunit III FY144_02080 PF02104 SURF1 family FY144_02085 PF02401 LytB protein FY144_02090 PF01636 Phosphotransferase enzyme family FY144_02095 PF00075 RNase H FY144_02105 PF00462 Glutaredoxin FY144_02105 PF08534 Redoxin FY144_02115 PF02622 Uncharacterized ACR, COG1678 FY144_02120 PF05532 CsbD-like FY144_02125 PF15887 Putative zinc-binding metallo-peptidase FY144_02125 PF10005 zinc-ribbon domain FY144_02130 PF00563 EAL domain FY144_02130 PF00990 Diguanylate cyclase, GGDEF domain FY144_02130 PF03707 Bacterial signalling protein N terminal repeat FY144_02130 PF13188 PAS domain FY144_02135 PF13302 Acetyltransferase (GNAT) domain FY144_02140 PF05193 Peptidase M16 inactive domain FY144_02140 PF00675 Insulinase (Peptidase family M16) FY144_02145 PF14821 Threonine synthase N terminus FY144_02145 PF00291 Pyridoxal-phosphate dependent enzyme FY144_02165 PF13419 Haloacid dehalogenase-like hydrolase FY144_02170 PF00392 Bacterial regulatory proteins, gntR family FY144_02170 PF07729 FCD domain FY144_02185 PF18755 Restriction Enzyme Adenine Methylase Associated FY144_02185 PF01555 DNA methylase FY144_02190 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY144_02195 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY144_02205 PF14815 NUDIX domain FY144_02205 PF00730 HhH-GPD superfamily base excision DNA repair protein FY144_02220 PF13462 Thioredoxin FY144_02225 PF02463 RecF/RecN/SMC N terminal domain FY144_02230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_02235 PF00391 PEP-utilising enzyme, mobile domain FY144_02235 PF02896 PEP-utilising enzyme, TIM barrel domain FY144_02235 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY144_02250 PF00375 Sodium:dicarboxylate symporter family FY144_02280 PF06039 Malate:quinone oxidoreductase (Mqo) FY144_02295 PF00009 Elongation factor Tu GTP binding domain FY144_02300 PF01507 Phosphoadenosine phosphosulfate reductase family FY144_02305 PF01507 Phosphoadenosine phosphosulfate reductase family FY144_02310 PF02082 Transcriptional regulator FY144_02320 PF00528 Binding-protein-dependent transport system inner membrane component FY144_02325 PF00528 Binding-protein-dependent transport system inner membrane component FY144_02330 PF12857 TOBE-like domain FY144_02330 PF00005 ABC transporter FY144_02335 PF00698 Acyl transferase domain FY144_02335 PF08240 Alcohol dehydrogenase GroES-like domain FY144_02335 PF00107 Zinc-binding dehydrogenase FY144_02335 PF16197 Ketoacyl-synthetase C-terminal extension FY144_02335 PF00109 Beta-ketoacyl synthase, N-terminal domain FY144_02335 PF02801 Beta-ketoacyl synthase, C-terminal domain FY144_02335 PF08659 KR domain FY144_02335 PF00550 Phosphopantetheine attachment site FY144_02335 PF14765 Polyketide synthase dehydratase FY144_02340 PF00563 EAL domain FY144_02340 PF01590 GAF domain FY144_02340 PF00990 Diguanylate cyclase, GGDEF domain FY144_02340 PF00989 PAS fold FY144_02350 PF13977 BetI-type transcriptional repressor, C-terminal FY144_02350 PF00440 Bacterial regulatory proteins, tetR family FY144_02355 PF00171 Aldehyde dehydrogenase family FY144_02360 PF05199 GMC oxidoreductase FY144_02360 PF00732 GMC oxidoreductase FY144_02375 PF00654 Voltage gated chloride channel FY144_02395 PF00043 Glutathione S-transferase, C-terminal domain FY144_02395 PF02798 Glutathione S-transferase, N-terminal domain FY144_02405 PF07690 Major Facilitator Superfamily FY144_02415 PF04679 ATP dependent DNA ligase C terminal region FY144_02415 PF01068 ATP dependent DNA ligase domain FY144_02415 PF04675 DNA ligase N terminus FY144_02425 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY144_02430 PF00403 Heavy-metal-associated domain FY144_02435 PF17969 L,D-transpeptidase C-terminal domain FY144_02435 PF03734 L,D-transpeptidase catalytic domain FY144_02440 PF17969 L,D-transpeptidase C-terminal domain FY144_02440 PF03734 L,D-transpeptidase catalytic domain FY144_02445 PF01047 MarR family FY144_02450 PF02566 OsmC-like protein FY144_02465 PF12848 ABC transporter FY144_02465 PF00005 ABC transporter FY144_02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_02495 PF03466 LysR substrate binding domain FY144_02500 PF00106 short chain dehydrogenase FY144_02515 PF05872 Bacterial protein of unknown function (DUF853) FY144_02525 PF01638 HxlR-like helix-turn-helix FY144_02530 PF00106 short chain dehydrogenase FY144_02535 PF12833 Helix-turn-helix domain FY144_02545 PF00248 Aldo/keto reductase family FY144_02550 PF01062 Bestrophin, RFP-TM, chloride channel FY144_02555 PF08279 HTH domain FY144_02555 PF13280 WYL domain FY144_02570 PF01063 Amino-transferase class IV FY144_02575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_02575 PF00672 HAMP domain FY144_02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_02580 PF03466 LysR substrate binding domain FY144_02595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY144_02595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY144_02610 PF01810 LysE type translocator FY144_02615 PF01322 Cytochrome C' FY144_02620 PF00034 Cytochrome c FY144_02650 PF00376 MerR family regulatory protein FY144_02650 PF09278 MerR, DNA binding FY144_02660 PF02583 Metal-sensitive transcriptional repressor FY144_02675 PF00571 CBS domain FY144_02675 PF00005 ABC transporter FY144_02680 PF00528 Binding-protein-dependent transport system inner membrane component FY144_02690 PF00326 Prolyl oligopeptidase family FY144_02690 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY144_02700 PF00701 Dihydrodipicolinate synthetase family FY144_02710 PF02805 Metal binding domain of Ada FY144_02710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY144_02710 PF12833 Helix-turn-helix domain FY144_02710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY144_02715 PF01594 AI-2E family transporter FY144_02720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_02740 PF03006 Haemolysin-III related FY144_02750 PF01810 LysE type translocator FY144_02755 PF01641 SelR domain FY144_02760 PF13244 Domain of unknown function (DUF4040) FY144_02760 PF00361 Proton-conducting membrane transporter FY144_02760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY144_02765 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY144_02770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY144_02775 PF00361 Proton-conducting membrane transporter FY144_02780 PF01899 Na+/H+ ion antiporter subunit FY144_02785 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY144_02790 PF03334 Na+/H+ antiporter subunit FY144_02795 PF05443 ROS/MUCR transcriptional regulator protein FY144_02810 PF02657 Fe-S metabolism associated domain FY144_02815 PF17264 Family of unknown function (DUF5330) FY144_02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_02820 PF00512 His Kinase A (phospho-acceptor) domain FY144_02855 PF01810 LysE type translocator FY144_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_02860 PF03466 LysR substrate binding domain FY144_02865 PF00912 Transglycosylase FY144_02865 PF00905 Penicillin binding protein transpeptidase domain FY144_02870 PF03692 Putative zinc- or iron-chelating domain FY144_02875 PF00905 Penicillin binding protein transpeptidase domain FY144_02880 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ FY144_02885 PF04221 RelB antitoxin FY144_02890 PF00403 Heavy-metal-associated domain FY144_02895 PF09278 MerR, DNA binding FY144_02895 PF00376 MerR family regulatory protein FY144_02920 PF07690 Major Facilitator Superfamily FY144_02925 PF08244 Glycosyl hydrolases family 32 C terminal FY144_02925 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY144_02930 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY144_02940 PF01037 Lrp/AsnC ligand binding domain FY144_02940 PF13404 AsnC-type helix-turn-helix domain FY144_02980 PF04860 Phage portal protein FY144_03070 PF00072 Response regulator receiver domain FY144_03070 PF00486 Transcriptional regulatory protein, C terminal FY144_03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_03090 PF03100 CcmE FY144_03095 PF01578 Cytochrome C assembly protein FY144_03095 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY144_03100 PF03918 Cytochrome C biogenesis protein FY144_03105 PF13180 PDZ domain FY144_03110 PF00486 Transcriptional regulatory protein, C terminal FY144_03110 PF00072 Response regulator receiver domain FY144_03115 PF00512 His Kinase A (phospho-acceptor) domain FY144_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_03115 PF00672 HAMP domain FY144_03120 PF04134 Protein of unknown function, DUF393 FY144_03125 PF06629 MltA-interacting protein MipA FY144_03130 PF03710 Glutamate-ammonia ligase adenylyltransferase FY144_03130 PF08335 GlnD PII-uridylyltransferase FY144_03135 PF00989 PAS fold FY144_03135 PF00512 His Kinase A (phospho-acceptor) domain FY144_03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_03145 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY144_03145 PF01433 Peptidase family M1 domain FY144_03145 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY144_03150 PF00892 EamA-like transporter family FY144_03165 PF00012 Hsp70 protein FY144_03170 PF00990 Diguanylate cyclase, GGDEF domain FY144_03200 PF08240 Alcohol dehydrogenase GroES-like domain FY144_03200 PF00107 Zinc-binding dehydrogenase FY144_03205 PF01638 HxlR-like helix-turn-helix FY144_03210 PF02673 Bacitracin resistance protein BacA FY144_03215 PF01769 Divalent cation transporter FY144_03215 PF03448 MgtE intracellular N domain FY144_03215 PF00571 CBS domain FY144_03220 PF07690 Major Facilitator Superfamily FY144_03225 PF00781 Diacylglycerol kinase catalytic domain FY144_03230 PF00202 Aminotransferase class-III FY144_03245 PF01048 Phosphorylase superfamily FY144_03245 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY144_03270 PF00155 Aminotransferase class I and II FY144_03280 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_03280 PF14759 Reductase C-terminal FY144_03285 PF03328 HpcH/HpaI aldolase/citrate lyase family FY144_03305 PF02530 Porin subfamily FY144_03310 PF02530 Porin subfamily FY144_03315 PF01464 Transglycosylase SLT domain FY144_03315 PF14718 Soluble lytic murein transglycosylase L domain FY144_03320 PF00701 Dihydrodipicolinate synthetase family FY144_03325 PF01668 SmpB protein FY144_03330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_03340 PF01192 RNA polymerase Rpb6 FY144_03345 PF02824 TGS domain FY144_03345 PF13291 ACT domain FY144_03345 PF04607 Region found in RelA / SpoT proteins FY144_03360 PF01648 4'-phosphopantetheinyl transferase superfamily FY144_03365 PF10502 Signal peptidase, peptidase S26 FY144_03370 PF00035 Double-stranded RNA binding motif FY144_03370 PF14622 Ribonuclease-III-like FY144_03375 PF07650 KH domain FY144_03375 PF01926 50S ribosome-binding GTPase FY144_03385 PF00072 Response regulator receiver domain FY144_03390 PF11967 Recombination protein O N terminal FY144_03390 PF02565 Recombination protein O C terminal FY144_03395 PF07690 Major Facilitator Superfamily FY144_03400 PF08241 Methyltransferase domain FY144_03405 PF03476 MOSC N-terminal beta barrel domain FY144_03405 PF03473 MOSC domain FY144_03405 PF00111 2Fe-2S iron-sulfur cluster binding domain FY144_03410 PF01966 HD domain FY144_03420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_03430 PF00005 ABC transporter FY144_03435 PF00528 Binding-protein-dependent transport system inner membrane component FY144_03440 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY144_03445 PF00924 Mechanosensitive ion channel FY144_03445 PF05552 Conserved TM helix FY144_03455 PF01966 HD domain FY144_03460 PF01571 Aminomethyltransferase folate-binding domain FY144_03480 PF00293 NUDIX domain FY144_03485 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY144_03495 PF00072 Response regulator receiver domain FY144_03495 PF00990 Diguanylate cyclase, GGDEF domain FY144_03500 PF01066 CDP-alcohol phosphatidyltransferase FY144_03505 PF02666 Phosphatidylserine decarboxylase FY144_03510 PF00005 ABC transporter FY144_03510 PF00664 ABC transporter transmembrane region FY144_03520 PF03641 Possible lysine decarboxylase FY144_03525 PF03717 Penicillin-binding Protein dimerisation domain FY144_03525 PF00905 Penicillin binding protein transpeptidase domain FY144_03530 PF00892 EamA-like transporter family FY144_03535 PF00561 alpha/beta hydrolase fold FY144_03550 PF04480 Protein of unknown function (DUF559) FY144_03555 PF01406 tRNA synthetases class I (C) catalytic domain FY144_03555 PF09190 DALR domain FY144_03560 PF00106 short chain dehydrogenase FY144_03565 PF00156 Phosphoribosyl transferase domain FY144_03565 PF13537 Glutamine amidotransferase domain FY144_03570 PF02674 Colicin V production protein FY144_03575 PF06745 KaiC FY144_03575 PF18073 Rubredoxin metal binding domain FY144_03590 PF00842 Alanine racemase, C-terminal domain FY144_03590 PF01168 Alanine racemase, N-terminal domain FY144_03595 PF12852 Cupin FY144_03595 PF12833 Helix-turn-helix domain FY144_03600 PF03591 AzlC protein FY144_03610 PF00772 DnaB-like helicase N terminal domain FY144_03610 PF03796 DnaB-like helicase C terminal domain FY144_03625 PF13533 Biotin-lipoyl like FY144_03630 PF03948 Ribosomal protein L9, C-terminal domain FY144_03630 PF01281 Ribosomal protein L9, N-terminal domain FY144_03640 PF01084 Ribosomal protein S18 FY144_03645 PF01250 Ribosomal protein S6 FY144_03655 PF00248 Aldo/keto reductase family FY144_03660 PF00698 Acyl transferase domain FY144_03670 PF00550 Phosphopantetheine attachment site FY144_03675 PF00109 Beta-ketoacyl synthase, N-terminal domain FY144_03675 PF02801 Beta-ketoacyl synthase, C-terminal domain FY144_03685 PF02618 YceG-like family FY144_03690 PF08340 Domain of unknown function (DUF1732) FY144_03690 PF03755 YicC-like family, N-terminal region FY144_03695 PF00625 Guanylate kinase FY144_03710 PF00398 Ribosomal RNA adenine dimethylase FY144_03715 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY144_03725 PF03968 OstA-like protein FY144_03725 PF04453 LPS transport system D FY144_03740 PF02789 Cytosol aminopeptidase family, N-terminal domain FY144_03740 PF00883 Cytosol aminopeptidase family, catalytic domain FY144_03750 PF03707 Bacterial signalling protein N terminal repeat FY144_03750 PF00563 EAL domain FY144_03750 PF00990 Diguanylate cyclase, GGDEF domain FY144_03755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_03760 PF00360 Phytochrome region FY144_03760 PF00990 Diguanylate cyclase, GGDEF domain FY144_03760 PF01590 GAF domain FY144_03760 PF00563 EAL domain FY144_03765 PF00990 Diguanylate cyclase, GGDEF domain FY144_03765 PF03707 Bacterial signalling protein N terminal repeat FY144_03765 PF00563 EAL domain FY144_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_03770 PF00512 His Kinase A (phospho-acceptor) domain FY144_03770 PF00989 PAS fold FY144_03775 PF00196 Bacterial regulatory proteins, luxR family FY144_03775 PF00072 Response regulator receiver domain FY144_03785 PF00005 ABC transporter FY144_03785 PF12848 ABC transporter FY144_03790 PF00990 Diguanylate cyclase, GGDEF domain FY144_03790 PF17158 Membrane-associated sensor, integral membrane domain FY144_03795 PF13417 Glutathione S-transferase, N-terminal domain FY144_03800 PF00334 Nucleoside diphosphate kinase FY144_03820 PF02391 MoaE protein FY144_03830 PF01066 CDP-alcohol phosphatidyltransferase FY144_03835 PF02151 UvrB/uvrC motif FY144_03835 PF01541 GIY-YIG catalytic domain FY144_03835 PF08459 UvrC Helix-hairpin-helix N-terminal FY144_03845 PF13505 Outer membrane protein beta-barrel domain FY144_03855 PF00445 Ribonuclease T2 family FY144_03865 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY144_03870 PF00384 Molybdopterin oxidoreductase FY144_03870 PF01568 Molydopterin dinucleotide binding domain FY144_03870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY144_03875 PF00293 NUDIX domain FY144_03895 PF00551 Formyl transferase FY144_03900 PF02769 AIR synthase related protein, C-terminal domain FY144_03900 PF00586 AIR synthase related protein, N-terminal domain FY144_03910 PF01594 AI-2E family transporter FY144_03920 PF13090 Polyphosphate kinase C-terminal domain 2 FY144_03920 PF17941 Polyphosphate kinase C-terminal domain 1 FY144_03920 PF02503 Polyphosphate kinase middle domain FY144_03920 PF13089 Polyphosphate kinase N-terminal domain FY144_03925 PF02541 Ppx/GppA phosphatase family FY144_03930 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_03950 PF00211 Adenylate and Guanylate cyclase catalytic domain FY144_03960 PF01612 3'-5' exonuclease FY144_03960 PF00570 HRDC domain FY144_03965 PF07690 Major Facilitator Superfamily FY144_03970 PF01336 OB-fold nucleic acid binding domain FY144_03970 PF02938 GAD domain FY144_03970 PF00152 tRNA synthetases class II (D, K and N) FY144_03980 PF00672 HAMP domain FY144_03980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_03985 PF00916 Sulfate permease family FY144_03985 PF01740 STAS domain FY144_03995 PF00521 DNA gyrase/topoisomerase IV, subunit A FY144_03995 PF03989 DNA gyrase C-terminal domain, beta-propeller FY144_04000 PF04376 Arginine-tRNA-protein transferase, N terminus FY144_04000 PF04377 Arginine-tRNA-protein transferase, C terminus FY144_04010 PF00490 Delta-aminolevulinic acid dehydratase FY144_04030 PF00464 Serine hydroxymethyltransferase FY144_04035 PF03477 ATP cone domain FY144_04040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY144_04040 PF01872 RibD C-terminal domain FY144_04045 PF00677 Lumazine binding domain FY144_04050 PF01810 LysE type translocator FY144_04055 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY144_04060 PF01029 NusB family FY144_04065 PF07690 Major Facilitator Superfamily FY144_04070 PF03030 Inorganic H+ pyrophosphatase FY144_04090 PF02504 Fatty acid synthesis protein FY144_04095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY144_04095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY144_04100 PF00216 Bacterial DNA-binding protein FY144_04105 PF13411 MerR HTH family regulatory protein FY144_04120 PF00403 Heavy-metal-associated domain FY144_04125 PF00175 Oxidoreductase NAD-binding domain FY144_04125 PF00111 2Fe-2S iron-sulfur cluster binding domain FY144_04125 PF00970 Oxidoreductase FAD-binding domain FY144_04130 PF09278 MerR, DNA binding FY144_04130 PF00376 MerR family regulatory protein FY144_04135 PF00528 Binding-protein-dependent transport system inner membrane component FY144_04140 PF00528 Binding-protein-dependent transport system inner membrane component FY144_04140 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_04145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_04145 PF00005 ABC transporter FY144_04150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_04150 PF00005 ABC transporter FY144_04155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_04165 PF02386 Cation transport protein FY144_04170 PF00585 C-terminal regulatory domain of Threonine dehydratase FY144_04170 PF00291 Pyridoxal-phosphate dependent enzyme FY144_04180 PF00990 Diguanylate cyclase, GGDEF domain FY144_04185 PF02525 Flavodoxin-like fold FY144_04190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_04190 PF03466 LysR substrate binding domain FY144_04195 PF00149 Calcineurin-like phosphoesterase FY144_04195 PF02872 5'-nucleotidase, C-terminal domain FY144_04215 PF00581 Rhodanese-like domain FY144_04220 PF02272 DHHA1 domain FY144_04220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY144_04220 PF01411 tRNA synthetases class II (A) FY144_04225 PF00291 Pyridoxal-phosphate dependent enzyme FY144_04225 PF00571 CBS domain FY144_04230 PF03441 FAD binding domain of DNA photolyase FY144_04230 PF00875 DNA photolyase FY144_04240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY144_04240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY144_04270 PF06055 Exopolysaccharide synthesis, ExoD FY144_04275 PF09335 SNARE associated Golgi protein FY144_04320 PF02397 Bacterial sugar transferase FY144_04325 PF00534 Glycosyl transferases group 1 FY144_04350 PF02628 Cytochrome oxidase assembly protein FY144_04355 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY144_04360 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY144_04365 PF00491 Arginase family FY144_04370 PF00380 Ribosomal protein S9/S16 FY144_04375 PF00572 Ribosomal protein L13 FY144_04385 PF13380 CoA binding domain FY144_04390 PF01053 Cys/Met metabolism PLP-dependent enzyme FY144_04415 PF00067 Cytochrome P450 FY144_04420 PF00990 Diguanylate cyclase, GGDEF domain FY144_04425 PF00574 Clp protease FY144_04430 PF06689 ClpX C4-type zinc finger FY144_04430 PF07724 AAA domain (Cdc48 subfamily) FY144_04430 PF10431 C-terminal, D2-small domain, of ClpB protein FY144_04435 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY144_04435 PF05362 Lon protease (S16) C-terminal proteolytic domain FY144_04435 PF00004 ATPase family associated with various cellular activities (AAA) FY144_04440 PF00216 Bacterial DNA-binding protein FY144_04445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY144_04465 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY144_04470 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY144_04475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY144_04485 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY144_04500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY144_04500 PF10531 SLBB domain FY144_04500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY144_04505 PF00384 Molybdopterin oxidoreductase FY144_04505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY144_04505 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY144_04510 PF00146 NADH dehydrogenase FY144_04515 PF12838 4Fe-4S dicluster domain FY144_04520 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY144_04525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY144_04530 PF00361 Proton-conducting membrane transporter FY144_04530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY144_04535 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY144_04535 PF00361 Proton-conducting membrane transporter FY144_04540 PF00361 Proton-conducting membrane transporter FY144_04545 PF02237 Biotin protein ligase C terminal domain FY144_04545 PF03099 Biotin/lipoate A/B protein ligase family FY144_04545 PF08279 HTH domain FY144_04550 PF17770 Ribonuclease J C-terminal domain FY144_04550 PF12706 Beta-lactamase superfamily domain FY144_04550 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY144_04560 PF03129 Anticodon binding domain FY144_04560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY144_04565 PF02687 FtsX-like permease family FY144_04565 PF12704 MacB-like periplasmic core domain FY144_04570 PF00005 ABC transporter FY144_04575 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY144_04575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY144_04575 PF14579 Helix-hairpin-helix motif FY144_04575 PF02811 PHP domain FY144_04585 PF00817 impB/mucB/samB family FY144_04585 PF11799 impB/mucB/samB family C-terminal domain FY144_04605 PF00072 Response regulator receiver domain FY144_04610 PF00990 Diguanylate cyclase, GGDEF domain FY144_04610 PF00072 Response regulator receiver domain FY144_04615 PF00471 Ribosomal protein L33 FY144_04620 PF07690 Major Facilitator Superfamily FY144_04635 PF08461 Ribonuclease R winged-helix domain FY144_04635 PF17876 Cold shock domain FY144_04635 PF08206 Ribonuclease B OB domain FY144_04635 PF00575 S1 RNA binding domain FY144_04635 PF00773 RNB domain FY144_04640 PF01751 Toprim domain FY144_04640 PF13368 Topoisomerase C-terminal repeat FY144_04640 PF01396 Topoisomerase DNA binding C4 zinc finger FY144_04640 PF01131 DNA topoisomerase FY144_04650 PF02481 DNA recombination-mediator protein A FY144_04650 PF17782 DprA winged helix domain FY144_04655 PF02660 Glycerol-3-phosphate acyltransferase FY144_04660 PF01979 Amidohydrolase family FY144_04665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY144_04665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY144_04680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY144_04680 PF18158 Adaptive response protein AidB N-terminal domain FY144_04680 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_04685 PF00583 Acetyltransferase (GNAT) family FY144_04705 PF03652 Holliday junction resolvase FY144_04710 PF03831 PhnA domain FY144_04710 PF08274 PhnA Zinc-Ribbon FY144_04720 PF02686 Glu-tRNAGln amidotransferase C subunit FY144_04725 PF01425 Amidase FY144_04730 PF00583 Acetyltransferase (GNAT) family FY144_04730 PF13673 Acetyltransferase (GNAT) domain FY144_04735 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY144_04750 PF02637 GatB domain FY144_04750 PF02934 GatB/GatE catalytic domain FY144_04760 PF00583 Acetyltransferase (GNAT) family FY144_04780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY144_04785 PF02785 Biotin carboxylase C-terminal domain FY144_04785 PF00289 Biotin carboxylase, N-terminal domain FY144_04785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY144_04790 PF00364 Biotin-requiring enzyme FY144_04795 PF01220 Dehydroquinase class II FY144_04805 PF00155 Aminotransferase class I and II FY144_04830 PF10150 Ribonuclease E/G family FY144_04830 PF00575 S1 RNA binding domain FY144_04830 PF12111 Polyribonucleotide phosphorylase C terminal FY144_04835 PF01520 N-acetylmuramoyl-L-alanine amidase FY144_04840 PF00905 Penicillin binding protein transpeptidase domain FY144_04840 PF00912 Transglycosylase FY144_04840 PF17092 Penicillin-binding protein OB-like domain FY144_04860 PF01513 ATP-NAD kinase FY144_04865 PF02567 Phenazine biosynthesis-like protein FY144_04885 PF00111 2Fe-2S iron-sulfur cluster binding domain FY144_04895 PF00809 Pterin binding enzyme FY144_04900 PF02152 Dihydroneopterin aldolase FY144_04905 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY144_04915 PF05128 Domain of unknown function (DUF697) FY144_04920 PF04317 YcjX-like family, DUF463 FY144_04930 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY144_04945 PF13188 PAS domain FY144_04945 PF00512 His Kinase A (phospho-acceptor) domain FY144_04945 PF08448 PAS fold FY144_04945 PF00072 Response regulator receiver domain FY144_04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_04950 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY144_04955 PF00004 ATPase family associated with various cellular activities (AAA) FY144_04955 PF07724 AAA domain (Cdc48 subfamily) FY144_04955 PF17871 AAA lid domain FY144_04955 PF02861 Clp amino terminal domain, pathogenicity island component FY144_04955 PF10431 C-terminal, D2-small domain, of ClpB protein FY144_04975 PF03466 LysR substrate binding domain FY144_04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_04985 PF01230 HIT domain FY144_05010 PF00318 Ribosomal protein S2 FY144_05015 PF00889 Elongation factor TS FY144_05020 PF00696 Amino acid kinase family FY144_05025 PF01765 Ribosome recycling factor FY144_05030 PF01255 Putative undecaprenyl diphosphate synthase FY144_05040 PF17820 PDZ domain FY144_05040 PF02163 Peptidase family M50 FY144_05045 PF07244 Surface antigen variable number repeat FY144_05045 PF01103 Surface antigen FY144_05050 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_05050 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY144_05055 PF07977 FabA-like domain FY144_05060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY144_05060 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_05065 PF06230 LpxI C-terminal domain FY144_05065 PF17930 LpxI N-terminal domain FY144_05070 PF02684 Lipid-A-disaccharide synthetase FY144_05075 PF07729 FCD domain FY144_05075 PF00392 Bacterial regulatory proteins, gntR family FY144_05080 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_05085 PF00528 Binding-protein-dependent transport system inner membrane component FY144_05090 PF00528 Binding-protein-dependent transport system inner membrane component FY144_05095 PF00005 ABC transporter FY144_05100 PF00285 Citrate synthase, C-terminal domain FY144_05115 PF01726 LexA DNA binding domain FY144_05115 PF00717 Peptidase S24-like FY144_05125 PF00793 DAHP synthetase I family FY144_05130 PF00113 Enolase, C-terminal TIM barrel domain FY144_05130 PF03952 Enolase, N-terminal domain FY144_05140 PF00676 Dehydrogenase E1 component FY144_05145 PF00364 Biotin-requiring enzyme FY144_05145 PF02779 Transketolase, pyrimidine binding domain FY144_05145 PF02780 Transketolase, C-terminal domain FY144_05150 PF02817 e3 binding domain FY144_05150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY144_05150 PF00364 Biotin-requiring enzyme FY144_05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_05160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY144_05170 PF04055 Radical SAM superfamily FY144_05170 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY144_05175 PF00892 EamA-like transporter family FY144_05190 PF03364 Polyketide cyclase / dehydrase and lipid transport FY144_05195 PF02464 Competence-damaged protein FY144_05195 PF18146 Damage-inducible protein CinA KH domain FY144_05195 PF00994 Probable molybdopterin binding domain FY144_05200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY144_05200 PF02542 YgbB family FY144_05205 PF01207 Dihydrouridine synthase (Dus) FY144_05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_05210 PF00512 His Kinase A (phospho-acceptor) domain FY144_05210 PF00989 PAS fold FY144_05215 PF00072 Response regulator receiver domain FY144_05215 PF00158 Sigma-54 interaction domain FY144_05215 PF02954 Bacterial regulatory protein, Fis family FY144_05220 PF00672 HAMP domain FY144_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_05220 PF00512 His Kinase A (phospho-acceptor) domain FY144_05220 PF00989 PAS fold FY144_05225 PF02954 Bacterial regulatory protein, Fis family FY144_05225 PF00072 Response regulator receiver domain FY144_05225 PF00158 Sigma-54 interaction domain FY144_05230 PF02080 TrkA-C domain FY144_05230 PF02254 TrkA-N domain FY144_05235 PF17209 Hfq protein FY144_05240 PF13167 GTP-binding GTPase N-terminal FY144_05240 PF16360 GTP-binding GTPase Middle Region FY144_05240 PF01926 50S ribosome-binding GTPase FY144_05245 PF03819 MazG nucleotide pyrophosphohydrolase domain FY144_05255 PF10414 Sirohaem synthase dimerisation region FY144_05255 PF14824 Sirohaem biosynthesis protein central FY144_05255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_05275 PF00970 Oxidoreductase FAD-binding domain FY144_05275 PF00175 Oxidoreductase NAD-binding domain FY144_05295 PF02347 Glycine cleavage system P-protein FY144_05300 PF01597 Glycine cleavage H-protein FY144_05305 PF01571 Aminomethyltransferase folate-binding domain FY144_05305 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY144_05330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY144_05335 PF01479 S4 domain FY144_05335 PF00849 RNA pseudouridylate synthase FY144_05340 PF13419 Haloacid dehalogenase-like hydrolase FY144_05355 PF01042 Endoribonuclease L-PSP FY144_05360 PF00756 Putative esterase FY144_05370 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY144_05385 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY144_05385 PF00578 AhpC/TSA family FY144_05395 PF00043 Glutathione S-transferase, C-terminal domain FY144_05395 PF02798 Glutathione S-transferase, N-terminal domain FY144_05410 PF13936 Helix-turn-helix domain FY144_05410 PF00665 Integrase core domain FY144_05415 PF03358 NADPH-dependent FMN reductase FY144_05420 PF03960 ArsC family FY144_05425 PF01758 Sodium Bile acid symporter family FY144_05430 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY144_05440 PF00654 Voltage gated chloride channel FY144_05445 PF03099 Biotin/lipoate A/B protein ligase family FY144_05445 PF12706 Beta-lactamase superfamily domain FY144_05450 PF01026 TatD related DNase FY144_05455 PF08264 Anticodon-binding domain of tRNA FY144_05455 PF09334 tRNA synthetases class I (M) FY144_05460 PF09115 DNA polymerase III, delta subunit, C terminal FY144_05465 PF02223 Thymidylate kinase FY144_05470 PF07943 Penicillin-binding protein 5, C-terminal domain FY144_05470 PF00768 D-alanyl-D-alanine carboxypeptidase FY144_05475 PF03330 Lytic transglycolase FY144_05475 PF05036 Sporulation related domain FY144_05515 PF03989 DNA gyrase C-terminal domain, beta-propeller FY144_05515 PF00521 DNA gyrase/topoisomerase IV, subunit A FY144_05520 PF01914 MarC family integral membrane protein FY144_05525 PF00571 CBS domain FY144_05525 PF01743 Poly A polymerase head domain FY144_05535 PF00436 Single-strand binding protein family FY144_05540 PF17755 UvrA DNA-binding domain FY144_05540 PF17760 UvrA interaction domain FY144_05550 PF01207 Dihydrouridine synthase (Dus) FY144_05555 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY144_05560 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_05570 PF00950 ABC 3 transport family FY144_05575 PF00005 ABC transporter FY144_05580 PF01297 Zinc-uptake complex component A periplasmic FY144_05585 PF00356 Bacterial regulatory proteins, lacI family FY144_05595 PF00248 Aldo/keto reductase family FY144_05605 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY144_05605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY144_05610 PF03597 Cytochrome oxidase maturation protein cbb3-type FY144_05620 PF05751 FixH FY144_05625 PF13746 4Fe-4S dicluster domain FY144_05625 PF12801 4Fe-4S binding domain FY144_05625 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY144_05645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY144_05645 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY144_05660 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY144_05665 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY144_05685 PF00376 MerR family regulatory protein FY144_05685 PF09278 MerR, DNA binding FY144_05690 PF00571 CBS domain FY144_05690 PF01769 Divalent cation transporter FY144_05690 PF03448 MgtE intracellular N domain FY144_05695 PF00384 Molybdopterin oxidoreductase FY144_05705 PF01327 Polypeptide deformylase FY144_05715 PF00989 PAS fold FY144_05715 PF00512 His Kinase A (phospho-acceptor) domain FY144_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_05725 PF03099 Biotin/lipoate A/B protein ligase family FY144_05730 PF00107 Zinc-binding dehydrogenase FY144_05730 PF08240 Alcohol dehydrogenase GroES-like domain FY144_05755 PF07549 SecD/SecF GG Motif FY144_05755 PF02355 Protein export membrane protein FY144_05760 PF02699 Preprotein translocase subunit FY144_05770 PF08240 Alcohol dehydrogenase GroES-like domain FY144_05770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY144_05775 PF00440 Bacterial regulatory proteins, tetR family FY144_05775 PF08360 QacR-like protein, C-terminal region FY144_05780 PF00067 Cytochrome P450 FY144_05790 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_05790 PF06426 Serine acetyltransferase, N-terminal FY144_05795 PF00561 alpha/beta hydrolase fold FY144_05805 PF01494 FAD binding domain FY144_05810 PF01053 Cys/Met metabolism PLP-dependent enzyme FY144_05815 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_05820 PF00528 Binding-protein-dependent transport system inner membrane component FY144_05825 PF00528 Binding-protein-dependent transport system inner membrane component FY144_05830 PF00005 ABC transporter FY144_05845 PF02272 DHHA1 domain FY144_05845 PF01368 DHH family FY144_05845 PF17768 RecJ OB domain FY144_05855 PF01842 ACT domain FY144_05855 PF00742 Homoserine dehydrogenase FY144_05855 PF03447 Homoserine dehydrogenase, NAD binding domain FY144_05860 PF00155 Aminotransferase class I and II FY144_05865 PF01156 Inosine-uridine preferring nucleoside hydrolase FY144_05870 PF01925 Sulfite exporter TauE/SafE FY144_05885 PF00107 Zinc-binding dehydrogenase FY144_05885 PF08240 Alcohol dehydrogenase GroES-like domain FY144_05890 PF00109 Beta-ketoacyl synthase, N-terminal domain FY144_05890 PF02801 Beta-ketoacyl synthase, C-terminal domain FY144_05900 PF07977 FabA-like domain FY144_05905 PF00550 Phosphopantetheine attachment site FY144_05910 PF04055 Radical SAM superfamily FY144_05915 PF00027 Cyclic nucleotide-binding domain FY144_05915 PF13545 Crp-like helix-turn-helix domain FY144_05925 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY144_05930 PF17746 SfsA N-terminal OB domain FY144_05930 PF03749 Sugar fermentation stimulation protein RE domain FY144_05935 PF00557 Metallopeptidase family M24 FY144_05955 PF01474 Class-II DAHP synthetase family FY144_05970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY144_05970 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_05980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY144_05985 PF13419 Haloacid dehalogenase-like hydrolase FY144_05995 PF00206 Lyase FY144_05995 PF10415 Fumarase C C-terminus FY144_06005 PF06418 CTP synthase N-terminus FY144_06005 PF00117 Glutamine amidotransferase class-I FY144_06010 PF03840 Preprotein translocase SecG subunit FY144_06015 PF00121 Triosephosphate isomerase FY144_06025 PF00204 DNA gyrase B FY144_06025 PF00986 DNA gyrase B subunit, carboxyl terminus FY144_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_06025 PF01751 Toprim domain FY144_06030 PF01370 NAD dependent epimerase/dehydratase family FY144_06035 PF00574 Clp protease FY144_06045 PF01022 Bacterial regulatory protein, arsR family FY144_06050 PF13091 PLD-like domain FY144_06055 PF00072 Response regulator receiver domain FY144_06060 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY144_06060 PF01571 Aminomethyltransferase folate-binding domain FY144_06060 PF01266 FAD dependent oxidoreductase FY144_06060 PF16350 FAD dependent oxidoreductase central domain FY144_06080 PF12795 Mechanosensitive ion channel porin domain FY144_06080 PF00924 Mechanosensitive ion channel FY144_06080 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY144_06145 PF00005 ABC transporter FY144_06150 PF02405 Permease MlaE FY144_06155 PF13378 Enolase C-terminal domain-like FY144_06155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_06165 PF01515 Phosphate acetyl/butaryl transferase FY144_06165 PF00390 Malic enzyme, N-terminal domain FY144_06165 PF03949 Malic enzyme, NAD binding domain FY144_06175 PF00881 Nitroreductase family FY144_06180 PF07676 WD40-like Beta Propeller Repeat FY144_06190 PF00795 Carbon-nitrogen hydrolase FY144_06190 PF02540 NAD synthase FY144_06195 PF00884 Sulfatase FY144_06205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_06205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY144_06220 PF05698 Bacterial trigger factor protein (TF) C-terminus FY144_06220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY144_06220 PF05697 Bacterial trigger factor protein (TF) FY144_06240 PF01134 Glucose inhibited division protein A FY144_06260 PF08240 Alcohol dehydrogenase GroES-like domain FY144_06260 PF00107 Zinc-binding dehydrogenase FY144_06270 PF00550 Phosphopantetheine attachment site FY144_06275 PF00501 AMP-binding enzyme FY144_06275 PF13193 AMP-binding enzyme C-terminal domain FY144_06285 PF04715 Anthranilate synthase component I, N terminal region FY144_06285 PF00117 Glutamine amidotransferase class-I FY144_06285 PF00425 chorismate binding enzyme FY144_06290 PF01702 Queuine tRNA-ribosyltransferase FY144_06295 PF02547 Queuosine biosynthesis protein FY144_06300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY144_06305 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY144_06310 PF01467 Cytidylyltransferase-like FY144_06325 PF00591 Glycosyl transferase family, a/b domain FY144_06325 PF02885 Glycosyl transferase family, helical bundle domain FY144_06330 PF00218 Indole-3-glycerol phosphate synthase FY144_06335 PF01967 MoaC family FY144_06340 PF00994 Probable molybdopterin binding domain FY144_06340 PF03454 MoeA C-terminal region (domain IV) FY144_06340 PF03453 MoeA N-terminal region (domain I and II) FY144_06345 PF17158 Membrane-associated sensor, integral membrane domain FY144_06345 PF00990 Diguanylate cyclase, GGDEF domain FY144_06355 PF02254 TrkA-N domain FY144_06355 PF00999 Sodium/hydrogen exchanger family FY144_06365 PF06463 Molybdenum Cofactor Synthesis C FY144_06365 PF04055 Radical SAM superfamily FY144_06375 PF07690 Major Facilitator Superfamily FY144_06380 PF12804 MobA-like NTP transferase domain FY144_06385 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY144_06390 PF01551 Peptidase family M23 FY144_06400 PF01975 Survival protein SurE FY144_06405 PF02403 Seryl-tRNA synthetase N-terminal domain FY144_06405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY144_06410 PF00902 Sec-independent protein translocase protein (TatC) FY144_06415 PF02416 mttA/Hcf106 family FY144_06420 PF02416 mttA/Hcf106 family FY144_06425 PF04079 Segregation and condensation complex subunit ScpB FY144_06430 PF02616 Segregation and condensation protein ScpA FY144_06435 PF00933 Glycosyl hydrolase family 3 N terminal domain FY144_06445 PF03485 Arginyl tRNA synthetase N terminal domain FY144_06445 PF05746 DALR anticodon binding domain FY144_06445 PF00750 tRNA synthetases class I (R) FY144_06450 PF13286 Phosphohydrolase-associated domain FY144_06450 PF01966 HD domain FY144_06455 PF01521 Iron-sulphur cluster biosynthesis FY144_06465 PF08238 Sel1 repeat FY144_06475 PF00133 tRNA synthetases class I (I, L, M and V) FY144_06475 PF10458 Valyl tRNA synthetase tRNA binding arm FY144_06475 PF08264 Anticodon-binding domain of tRNA FY144_06515 PF03358 NADPH-dependent FMN reductase FY144_06520 PF02464 Competence-damaged protein FY144_06520 PF00994 Probable molybdopterin binding domain FY144_06520 PF18146 Damage-inducible protein CinA KH domain FY144_06525 PF00582 Universal stress protein family FY144_06530 PF00156 Phosphoribosyl transferase domain FY144_06540 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY144_06540 PF02867 Ribonucleotide reductase, barrel domain FY144_06555 PF01566 Natural resistance-associated macrophage protein FY144_06565 PF00664 ABC transporter transmembrane region FY144_06565 PF00005 ABC transporter FY144_06570 PF01594 AI-2E family transporter FY144_06575 PF00583 Acetyltransferase (GNAT) family FY144_06605 PF03129 Anticodon binding domain FY144_06605 PF02824 TGS domain FY144_06605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY144_06605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY144_06615 PF01809 Putative membrane protein insertion efficiency factor FY144_06625 PF01227 GTP cyclohydrolase I FY144_06630 PF01502 Phosphoribosyl-AMP cyclohydrolase FY144_06635 PF01734 Patatin-like phospholipase FY144_06645 PF00478 IMP dehydrogenase / GMP reductase domain FY144_06645 PF00571 CBS domain FY144_06680 PF03313 Serine dehydratase alpha chain FY144_06680 PF03315 Serine dehydratase beta chain FY144_06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_06720 PF03466 LysR substrate binding domain FY144_06730 PF01965 DJ-1/PfpI family FY144_06730 PF12833 Helix-turn-helix domain FY144_06735 PF01256 Carbohydrate kinase FY144_06735 PF03853 YjeF-related protein N-terminus FY144_06745 PF00543 Nitrogen regulatory protein P-II FY144_06750 PF00120 Glutamine synthetase, catalytic domain FY144_06750 PF03951 Glutamine synthetase, beta-Grasp domain FY144_06760 PF08755 Hemimethylated DNA-binding protein YccV like FY144_06770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_06780 PF00892 EamA-like transporter family FY144_06790 PF17757 UvrB interaction domain FY144_06790 PF00271 Helicase conserved C-terminal domain FY144_06790 PF00270 DEAD/DEAH box helicase FY144_06790 PF03461 TRCF domain FY144_06790 PF02559 CarD-like/TRCF domain FY144_06800 PF00270 DEAD/DEAH box helicase FY144_06800 PF00271 Helicase conserved C-terminal domain FY144_06800 PF17191 RecG wedge domain FY144_06815 PF01850 PIN domain FY144_06830 PF01380 SIS domain FY144_06840 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_06840 PF14602 Hexapeptide repeat of succinyl-transferase FY144_06840 PF12804 MobA-like NTP transferase domain FY144_06845 PF07729 FCD domain FY144_06845 PF00392 Bacterial regulatory proteins, gntR family FY144_06850 PF02608 ABC transporter substrate-binding protein PnrA-like FY144_06855 PF02653 Branched-chain amino acid transport system / permease component FY144_06860 PF02653 Branched-chain amino acid transport system / permease component FY144_06865 PF00005 ABC transporter FY144_06875 PF01494 FAD binding domain FY144_06880 PF03547 Membrane transport protein FY144_06885 PF02683 Cytochrome C biogenesis protein transmembrane region FY144_06905 PF00313 'Cold-shock' DNA-binding domain FY144_06955 PF13291 ACT domain FY144_06955 PF04607 Region found in RelA / SpoT proteins FY144_06955 PF02824 TGS domain FY144_06990 PF18509 Magnetochrome domain FY144_06990 PF17820 PDZ domain FY144_07085 PF05974 Domain of unknown function (DUF892) FY144_07100 PF01906 Putative heavy-metal-binding FY144_07160 PF01343 Peptidase family S49 FY144_07210 PF03793 PASTA domain FY144_07210 PF00069 Protein kinase domain FY144_07220 PF05532 CsbD-like FY144_07230 PF00145 C-5 cytosine-specific DNA methylase FY144_07240 PF01555 DNA methylase FY144_07260 PF00271 Helicase conserved C-terminal domain FY144_07260 PF04851 Type III restriction enzyme, res subunit FY144_07265 PF04545 Sigma-70, region 4 FY144_07265 PF04542 Sigma-70 region 2 FY144_07265 PF00140 Sigma-70 factor, region 1.2 FY144_07265 PF04539 Sigma-70 region 3 FY144_07280 PF00712 DNA polymerase III beta subunit, N-terminal domain FY144_07280 PF02767 DNA polymerase III beta subunit, central domain FY144_07280 PF02768 DNA polymerase III beta subunit, C-terminal domain FY144_07370 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain FY144_07370 PF00589 Phage integrase family FY144_07385 PF00005 ABC transporter FY144_07385 PF02687 FtsX-like permease family FY144_07385 PF12704 MacB-like periplasmic core domain FY144_07390 PF02687 FtsX-like permease family FY144_07390 PF12704 MacB-like periplasmic core domain FY144_07390 PF00005 ABC transporter FY144_07410 PF01521 Iron-sulphur cluster biosynthesis FY144_07415 PF01883 Iron-sulfur cluster assembly protein FY144_07420 PF00266 Aminotransferase class-V FY144_07425 PF01458 Uncharacterized protein family (UPF0051) FY144_07430 PF00005 ABC transporter FY144_07435 PF01458 Uncharacterized protein family (UPF0051) FY144_07440 PF00266 Aminotransferase class-V FY144_07445 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY144_07450 PF03702 Anhydro-N-acetylmuramic acid kinase FY144_07455 PF00579 tRNA synthetases class I (W and Y) FY144_07465 PF00578 AhpC/TSA family FY144_07470 PF04305 Protein of unknown function (DUF455) FY144_07475 PF01476 LysM domain FY144_07475 PF08525 Opacity-associated protein A N-terminal motif FY144_07475 PF01551 Peptidase family M23 FY144_07480 PF00270 DEAD/DEAH box helicase FY144_07480 PF00271 Helicase conserved C-terminal domain FY144_07495 PF00834 Ribulose-phosphate 3 epimerase family FY144_07505 PF10397 Adenylosuccinate lyase C-terminus FY144_07505 PF00206 Lyase FY144_07515 PF01259 SAICAR synthetase FY144_07520 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY144_07540 PF00155 Aminotransferase class I and II FY144_07540 PF00392 Bacterial regulatory proteins, gntR family FY144_07545 PF00586 AIR synthase related protein, N-terminal domain FY144_07545 PF02769 AIR synthase related protein, C-terminal domain FY144_07545 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY144_07570 PF00462 Glutaredoxin FY144_07575 PF07690 Major Facilitator Superfamily FY144_07580 PF00459 Inositol monophosphatase family FY144_07585 PF00459 Inositol monophosphatase family FY144_07590 PF01171 PP-loop family FY144_07595 PF04960 Glutaminase FY144_07600 PF01479 S4 domain FY144_07600 PF00163 Ribosomal protein S4/S9 N-terminal domain FY144_07605 PF03741 Integral membrane protein TerC family FY144_07615 PF00892 EamA-like transporter family FY144_07620 PF01810 LysE type translocator FY144_07630 PF01177 Asp/Glu/Hydantoin racemase FY144_07635 PF00588 SpoU rRNA Methylase family FY144_07645 PF00180 Isocitrate/isopropylmalate dehydrogenase FY144_07655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY144_07655 PF01411 tRNA synthetases class II (A) FY144_07655 PF02272 DHHA1 domain FY144_07660 PF00154 recA bacterial DNA recombination protein FY144_07665 PF00294 pfkB family carbohydrate kinase FY144_07670 PF04227 Indigoidine synthase A like protein FY144_07675 PF00691 OmpA family FY144_07675 PF01389 OmpA-like transmembrane domain FY144_07680 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_07685 PF00528 Binding-protein-dependent transport system inner membrane component FY144_07690 PF00528 Binding-protein-dependent transport system inner membrane component FY144_07695 PF06233 Usg-like family FY144_07700 PF08241 Methyltransferase domain FY144_07705 PF09084 NMT1/THI5 like FY144_07710 PF01037 Lrp/AsnC ligand binding domain FY144_07710 PF13404 AsnC-type helix-turn-helix domain FY144_07715 PF03167 Uracil DNA glycosylase superfamily FY144_07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_07725 PF00512 His Kinase A (phospho-acceptor) domain FY144_07725 PF00989 PAS fold FY144_07730 PF01219 Prokaryotic diacylglycerol kinase FY144_07735 PF02277 Phosphoribosyltransferase FY144_07740 PF02654 Cobalamin-5-phosphate synthase FY144_07755 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY144_07760 PF01061 ABC-2 type transporter FY144_07765 PF00005 ABC transporter FY144_07770 PF01925 Sulfite exporter TauE/SafE FY144_07780 PF08269 Cache domain FY144_07780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_07790 PF16193 AAA C-terminal domain FY144_07790 PF12002 MgsA AAA+ ATPase C terminal FY144_07790 PF00004 ATPase family associated with various cellular activities (AAA) FY144_07795 PF00595 PDZ domain FY144_07795 PF13180 PDZ domain FY144_07815 PF00920 Dehydratase family FY144_07820 PF00174 Oxidoreductase molybdopterin binding domain FY144_07825 PF01794 Ferric reductase like transmembrane component FY144_07835 PF05675 Protein of unknown function (DUF817) FY144_07845 PF01196 Ribosomal protein L17 FY144_07850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY144_07850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY144_07850 PF01000 RNA polymerase Rpb3/RpoA insert domain FY144_07855 PF00411 Ribosomal protein S11 FY144_07860 PF00416 Ribosomal protein S13/S18 FY144_07870 PF00344 SecY translocase FY144_07875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY144_07880 PF00327 Ribosomal protein L30p/L7e FY144_07885 PF00333 Ribosomal protein S5, N-terminal domain FY144_07885 PF03719 Ribosomal protein S5, C-terminal domain FY144_07890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY144_07895 PF00347 Ribosomal protein L6 FY144_07900 PF00410 Ribosomal protein S8 FY144_07905 PF00253 Ribosomal protein S14p/S29e FY144_07910 PF00281 Ribosomal protein L5 FY144_07910 PF00673 ribosomal L5P family C-terminus FY144_07915 PF00467 KOW motif FY144_07915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY144_07920 PF00238 Ribosomal protein L14p/L23e FY144_07925 PF00366 Ribosomal protein S17 FY144_07930 PF00831 Ribosomal L29 protein FY144_07935 PF00252 Ribosomal protein L16p/L10e FY144_07940 PF07650 KH domain FY144_07940 PF00189 Ribosomal protein S3, C-terminal domain FY144_07945 PF00237 Ribosomal protein L22p/L17e FY144_07950 PF00203 Ribosomal protein S19 FY144_07955 PF00181 Ribosomal Proteins L2, RNA binding domain FY144_07955 PF03947 Ribosomal Proteins L2, C-terminal domain FY144_07960 PF00276 Ribosomal protein L23 FY144_07965 PF00573 Ribosomal protein L4/L1 family FY144_07970 PF00297 Ribosomal protein L3 FY144_07975 PF00338 Ribosomal protein S10p/S20e FY144_07980 PF00009 Elongation factor Tu GTP binding domain FY144_07980 PF03144 Elongation factor Tu domain 2 FY144_07980 PF03143 Elongation factor Tu C-terminal domain FY144_07985 PF00009 Elongation factor Tu GTP binding domain FY144_07985 PF03764 Elongation factor G, domain IV FY144_07985 PF03144 Elongation factor Tu domain 2 FY144_07985 PF14492 Elongation Factor G, domain II FY144_07985 PF00679 Elongation factor G C-terminus FY144_07990 PF00177 Ribosomal protein S7p/S5e FY144_07995 PF00164 Ribosomal protein S12/S23 FY144_08015 PF04997 RNA polymerase Rpb1, domain 1 FY144_08015 PF00623 RNA polymerase Rpb1, domain 2 FY144_08015 PF04983 RNA polymerase Rpb1, domain 3 FY144_08015 PF05000 RNA polymerase Rpb1, domain 4 FY144_08015 PF04998 RNA polymerase Rpb1, domain 5 FY144_08020 PF04560 RNA polymerase Rpb2, domain 7 FY144_08020 PF00562 RNA polymerase Rpb2, domain 6 FY144_08020 PF10385 RNA polymerase beta subunit external 1 domain FY144_08020 PF04565 RNA polymerase Rpb2, domain 3 FY144_08020 PF04561 RNA polymerase Rpb2, domain 2 FY144_08020 PF04563 RNA polymerase beta subunit FY144_08025 PF00542 Ribosomal protein L7/L12 C-terminal domain FY144_08025 PF16320 Ribosomal protein L7/L12 dimerisation domain FY144_08030 PF00466 Ribosomal protein L10 FY144_08035 PF00687 Ribosomal protein L1p/L10e family FY144_08040 PF00298 Ribosomal protein L11, RNA binding domain FY144_08040 PF03946 Ribosomal protein L11, N-terminal domain FY144_08045 PF00467 KOW motif FY144_08045 PF02357 Transcription termination factor nusG FY144_08050 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY144_08060 PF02719 Polysaccharide biosynthesis protein FY144_08060 PF08485 Polysaccharide biosynthesis protein C-terminal FY144_08065 PF00009 Elongation factor Tu GTP binding domain FY144_08065 PF03143 Elongation factor Tu C-terminal domain FY144_08065 PF03144 Elongation factor Tu domain 2 FY144_08070 PF03741 Integral membrane protein TerC family FY144_08075 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY144_08095 PF00664 ABC transporter transmembrane region FY144_08095 PF00005 ABC transporter FY144_08135 PF04542 Sigma-70 region 2 FY144_08135 PF04545 Sigma-70, region 4 FY144_08145 PF02954 Bacterial regulatory protein, Fis family FY144_08145 PF00072 Response regulator receiver domain FY144_08145 PF00158 Sigma-54 interaction domain FY144_08150 PF08769 Sporulation initiation factor Spo0A C terminal FY144_08150 PF00072 Response regulator receiver domain FY144_08155 PF00512 His Kinase A (phospho-acceptor) domain FY144_08155 PF01627 Hpt domain FY144_08155 PF00072 Response regulator receiver domain FY144_08155 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_08155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_08160 PF00072 Response regulator receiver domain FY144_08165 PF07536 HWE histidine kinase FY144_08165 PF08447 PAS fold FY144_08165 PF13426 PAS domain FY144_08170 PF00072 Response regulator receiver domain FY144_08175 PF00360 Phytochrome region FY144_08175 PF00512 His Kinase A (phospho-acceptor) domain FY144_08175 PF08446 PAS fold FY144_08175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_08175 PF01590 GAF domain FY144_08190 PF00588 SpoU rRNA Methylase family FY144_08190 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY144_08195 PF03061 Thioesterase superfamily FY144_08215 PF13460 NAD(P)H-binding FY144_08220 PF01638 HxlR-like helix-turn-helix FY144_08235 PF04851 Type III restriction enzyme, res subunit FY144_08235 PF02151 UvrB/uvrC motif FY144_08235 PF12344 Ultra-violet resistance protein B FY144_08235 PF17757 UvrB interaction domain FY144_08235 PF00271 Helicase conserved C-terminal domain FY144_08245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY144_08245 PF00756 Putative esterase FY144_08265 PF01556 DnaJ C terminal domain FY144_08265 PF00226 DnaJ domain FY144_08265 PF00684 DnaJ central domain FY144_08285 PF17151 Periplasmic sensor domain FY144_08285 PF00990 Diguanylate cyclase, GGDEF domain FY144_08295 PF00005 ABC transporter FY144_08295 PF08402 TOBE domain FY144_08305 PF01547 Bacterial extracellular solute-binding protein FY144_08310 PF00155 Aminotransferase class I and II FY144_08325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY144_08325 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY144_08330 PF00440 Bacterial regulatory proteins, tetR family FY144_08335 PF12833 Helix-turn-helix domain FY144_08335 PF06719 AraC-type transcriptional regulator N-terminus FY144_08340 PF08240 Alcohol dehydrogenase GroES-like domain FY144_08340 PF00107 Zinc-binding dehydrogenase FY144_08345 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_08350 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY144_08355 PF03472 Autoinducer binding domain FY144_08355 PF00196 Bacterial regulatory proteins, luxR family FY144_08360 PF14490 Helix-hairpin-helix containing domain FY144_08360 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY144_08360 PF13538 UvrD-like helicase C-terminal domain FY144_08380 PF08281 Sigma-70, region 4 FY144_08380 PF04542 Sigma-70 region 2 FY144_08395 PF00248 Aldo/keto reductase family FY144_08410 PF10369 Small subunit of acetolactate synthase FY144_08415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY144_08415 PF00205 Thiamine pyrophosphate enzyme, central domain FY144_08415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY144_08440 PF13302 Acetyltransferase (GNAT) domain FY144_08450 PF13180 PDZ domain FY144_08455 PF01145 SPFH domain / Band 7 family FY144_08460 PF01145 SPFH domain / Band 7 family FY144_08465 PF00186 Dihydrofolate reductase FY144_08470 PF00303 Thymidylate synthase FY144_08505 PF02913 FAD linked oxidases, C-terminal domain FY144_08505 PF01565 FAD binding domain FY144_08510 PF00873 AcrB/AcrD/AcrF family FY144_08515 PF13533 Biotin-lipoyl like FY144_08525 PF13361 UvrD-like helicase C-terminal domain FY144_08525 PF00580 UvrD/REP helicase N-terminal domain FY144_08550 PF00857 Isochorismatase family FY144_08570 PF00557 Metallopeptidase family M24 FY144_08570 PF01321 Creatinase/Prolidase N-terminal domain FY144_08580 PF02630 SCO1/SenC FY144_08590 PF01584 CheW-like domain FY144_08600 PF00929 Exonuclease FY144_08605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_08605 PF03466 LysR substrate binding domain FY144_08615 PF00583 Acetyltransferase (GNAT) family FY144_08620 PF01636 Phosphotransferase enzyme family FY144_08625 PF12826 Helix-hairpin-helix motif FY144_08625 PF00533 BRCA1 C Terminus (BRCT) domain FY144_08625 PF01653 NAD-dependent DNA ligase adenylation domain FY144_08625 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY144_08625 PF03120 NAD-dependent DNA ligase OB-fold domain FY144_08630 PF02463 RecF/RecN/SMC N terminal domain FY144_08635 PF13525 Outer membrane lipoprotein FY144_08640 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY144_08645 PF00091 Tubulin/FtsZ family, GTPase domain FY144_08645 PF12327 FtsZ family, C-terminal domain FY144_08650 PF02491 SHS2 domain inserted in FTSA FY144_08655 PF03799 Cell division protein FtsQ FY144_08655 PF08478 POTRA domain, FtsQ-type FY144_08660 PF01820 D-ala D-ala ligase N-terminus FY144_08660 PF07478 D-ala D-ala ligase C-terminus FY144_08665 PF07690 Major Facilitator Superfamily FY144_08665 PF00083 Sugar (and other) transporter FY144_08670 PF00990 Diguanylate cyclase, GGDEF domain FY144_08675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY144_08675 PF01565 FAD binding domain FY144_08680 PF08245 Mur ligase middle domain FY144_08680 PF02875 Mur ligase family, glutamate ligase domain FY144_08680 PF01225 Mur ligase family, catalytic domain FY144_08685 PF03033 Glycosyltransferase family 28 N-terminal domain FY144_08685 PF04101 Glycosyltransferase family 28 C-terminal domain FY144_08690 PF01098 Cell cycle protein FY144_08695 PF08245 Mur ligase middle domain FY144_08695 PF02875 Mur ligase family, glutamate ligase domain FY144_08700 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY144_08700 PF00953 Glycosyl transferase family 4 FY144_08705 PF08245 Mur ligase middle domain FY144_08705 PF02875 Mur ligase family, glutamate ligase domain FY144_08705 PF01225 Mur ligase family, catalytic domain FY144_08710 PF01225 Mur ligase family, catalytic domain FY144_08710 PF02875 Mur ligase family, glutamate ligase domain FY144_08710 PF08245 Mur ligase middle domain FY144_08715 PF00905 Penicillin binding protein transpeptidase domain FY144_08715 PF03717 Penicillin-binding Protein dimerisation domain FY144_08725 PF01795 MraW methylase family FY144_08730 PF02381 MraZ protein, putative antitoxin-like FY144_08755 PF01510 N-acetylmuramoyl-L-alanine amidase FY144_08760 PF00226 DnaJ domain FY144_08760 PF05099 Tellurite resistance protein TerB FY144_08765 PF00365 Phosphofructokinase FY144_08785 PF13649 Methyltransferase domain FY144_08790 PF01183 Glycosyl hydrolases family 25 FY144_08800 PF02219 Methylenetetrahydrofolate reductase FY144_08805 PF01209 ubiE/COQ5 methyltransferase family FY144_08810 PF00005 ABC transporter FY144_08810 PF12848 ABC transporter FY144_08815 PF12146 Serine aminopeptidase, S33 FY144_08820 PF02515 CoA-transferase family III FY144_08825 PF00205 Thiamine pyrophosphate enzyme, central domain FY144_08825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY144_08825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY144_08850 PF01476 LysM domain FY144_08850 PF03734 L,D-transpeptidase catalytic domain FY144_08855 PF07690 Major Facilitator Superfamily FY144_08875 PF10609 NUBPL iron-transfer P-loop NTPase FY144_08885 PF00465 Iron-containing alcohol dehydrogenase FY144_08890 PF00171 Aldehyde dehydrogenase family FY144_08895 PF00120 Glutamine synthetase, catalytic domain FY144_08895 PF03951 Glutamine synthetase, beta-Grasp domain FY144_08900 PF13520 Amino acid permease FY144_08915 PF13416 Bacterial extracellular solute-binding protein FY144_08930 PF00005 ABC transporter FY144_08930 PF08402 TOBE domain FY144_08935 PF00107 Zinc-binding dehydrogenase FY144_08935 PF08240 Alcohol dehydrogenase GroES-like domain FY144_08950 PF07690 Major Facilitator Superfamily FY144_08955 PF02310 B12 binding domain FY144_08955 PF02607 B12 binding domain FY144_08955 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY144_08955 PF00809 Pterin binding enzyme FY144_08955 PF02574 Homocysteine S-methyltransferase FY144_08975 PF13505 Outer membrane protein beta-barrel domain FY144_08990 PF04402 Protein of unknown function (DUF541) FY144_09000 PF01894 Uncharacterised protein family UPF0047 FY144_09005 PF01590 GAF domain FY144_09005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_09005 PF00512 His Kinase A (phospho-acceptor) domain FY144_09005 PF08446 PAS fold FY144_09005 PF00360 Phytochrome region FY144_09015 PF04542 Sigma-70 region 2 FY144_09015 PF04546 Sigma-70, non-essential region FY144_09015 PF03979 Sigma-70 factor, region 1.1 FY144_09015 PF04539 Sigma-70 region 3 FY144_09015 PF04545 Sigma-70, region 4 FY144_09015 PF00140 Sigma-70 factor, region 1.2 FY144_09020 PF01807 CHC2 zinc finger FY144_09020 PF08275 DNA primase catalytic core, N-terminal domain FY144_09020 PF08278 DNA primase DnaG DnaB-binding FY144_09020 PF10410 DnaB-helicase binding domain of primase FY144_09040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY144_09040 PF00117 Glutamine amidotransferase class-I FY144_09045 PF01554 MatE FY144_09050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_09050 PF00672 HAMP domain FY144_09050 PF02743 Cache domain FY144_09060 PF04228 Putative neutral zinc metallopeptidase FY144_09075 PF02142 MGS-like domain FY144_09075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY144_09075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY144_09085 PF00990 Diguanylate cyclase, GGDEF domain FY144_09085 PF07694 5TMR of 5TMR-LYT FY144_09100 PF01272 Transcription elongation factor, GreA/GreB, C-term FY144_09100 PF03449 Transcription elongation factor, N-terminal FY144_09105 PF00534 Glycosyl transferases group 1 FY144_09110 PF01037 Lrp/AsnC ligand binding domain FY144_09115 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_09120 PF03466 LysR substrate binding domain FY144_09130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY144_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_09145 PF03466 LysR substrate binding domain FY144_09155 PF01699 Sodium/calcium exchanger protein FY144_09160 PF00155 Aminotransferase class I and II FY144_09165 PF00563 EAL domain FY144_09165 PF05231 MASE1 FY144_09180 PF00313 'Cold-shock' DNA-binding domain FY144_09185 PF00753 Metallo-beta-lactamase superfamily FY144_09195 PF12802 MarR family FY144_09200 PF00072 Response regulator receiver domain FY144_09200 PF00486 Transcriptional regulatory protein, C terminal FY144_09205 PF00672 HAMP domain FY144_09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_09205 PF00512 His Kinase A (phospho-acceptor) domain FY144_09210 PF01588 Putative tRNA binding domain FY144_09215 PF03807 NADP oxidoreductase coenzyme F420-dependent FY144_09215 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY144_09230 PF01790 Prolipoprotein diacylglyceryl transferase FY144_09240 PF02578 Multi-copper polyphenol oxidoreductase laccase FY144_09255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY144_09255 PF14572 Phosphoribosyl synthetase-associated domain FY144_09265 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY144_09275 PF00535 Glycosyl transferase family 2 FY144_09280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_09280 PF00672 HAMP domain FY144_09285 PF00171 Aldehyde dehydrogenase family FY144_09290 PF02954 Bacterial regulatory protein, Fis family FY144_09295 PF03707 Bacterial signalling protein N terminal repeat FY144_09295 PF00563 EAL domain FY144_09295 PF13188 PAS domain FY144_09295 PF00990 Diguanylate cyclase, GGDEF domain FY144_09300 PF01386 Ribosomal L25p family FY144_09300 PF14693 Ribosomal protein TL5, C-terminal domain FY144_09305 PF00563 EAL domain FY144_09305 PF00990 Diguanylate cyclase, GGDEF domain FY144_09305 PF08447 PAS fold FY144_09305 PF08448 PAS fold FY144_09315 PF01195 Peptidyl-tRNA hydrolase FY144_09325 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY144_09330 PF06071 Protein of unknown function (DUF933) FY144_09330 PF01926 50S ribosome-binding GTPase FY144_09350 PF00156 Phosphoribosyl transferase domain FY144_09360 PF00032 Cytochrome b(C-terminal)/b6/petD FY144_09360 PF02167 Cytochrome C1 family FY144_09360 PF00033 Cytochrome b/b6/petB FY144_09365 PF00032 Cytochrome b(C-terminal)/b6/petD FY144_09365 PF00033 Cytochrome b/b6/petB FY144_09370 PF00355 Rieske [2Fe-2S] domain FY144_09370 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY144_09380 PF00664 ABC transporter transmembrane region FY144_09380 PF00005 ABC transporter FY144_09385 PF00005 ABC transporter FY144_09385 PF00664 ABC transporter transmembrane region FY144_09395 PF00588 SpoU rRNA Methylase family FY144_09400 PF02690 Na+/Pi-cotransporter FY144_09410 PF01218 Coproporphyrinogen III oxidase FY144_09425 PF01743 Poly A polymerase head domain FY144_09425 PF12627 Probable RNA and SrmB- binding site of polymerase A FY144_09425 PF13735 tRNA nucleotidyltransferase domain 2 putative FY144_09430 PF00293 NUDIX domain FY144_09440 PF07726 ATPase family associated with various cellular activities (AAA) FY144_09440 PF17863 AAA lid domain FY144_09460 PF00583 Acetyltransferase (GNAT) family FY144_09465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_09465 PF03466 LysR substrate binding domain FY144_09475 PF07690 Major Facilitator Superfamily FY144_09485 PF13409 Glutathione S-transferase, N-terminal domain FY144_09490 PF00293 NUDIX domain FY144_09505 PF00682 HMGL-like FY144_09505 PF08502 LeuA allosteric (dimerisation) domain FY144_09510 PF03594 Benzoate membrane transport protein FY144_09525 PF04545 Sigma-70, region 4 FY144_09525 PF04542 Sigma-70 region 2 FY144_09535 PF00574 Clp protease FY144_09540 PF04955 HupE / UreJ protein FY144_09550 PF14489 QueF-like protein FY144_09555 PF01545 Cation efflux family FY144_09555 PF16916 Dimerisation domain of Zinc Transporter FY144_09565 PF13458 Periplasmic binding protein FY144_09575 PF01022 Bacterial regulatory protein, arsR family FY144_09580 PF00005 ABC transporter FY144_09580 PF00571 CBS domain FY144_09585 PF00528 Binding-protein-dependent transport system inner membrane component FY144_09590 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY144_09600 PF00265 Thymidine kinase FY144_09605 PF00127 Copper binding proteins, plastocyanin/azurin family FY144_09615 PF03472 Autoinducer binding domain FY144_09615 PF00196 Bacterial regulatory proteins, luxR family FY144_09620 PF03350 Uncharacterized protein family, UPF0114 FY144_09625 PF07715 TonB-dependent Receptor Plug Domain FY144_09625 PF00593 TonB dependent receptor FY144_09625 PF04886 PT repeat FY144_09635 PF00117 Glutamine amidotransferase class-I FY144_09635 PF00425 chorismate binding enzyme FY144_09635 PF04715 Anthranilate synthase component I, N terminal region FY144_09645 PF11871 Domain of unknown function (DUF3391) FY144_09645 PF01966 HD domain FY144_09650 PF13382 Adenine deaminase C-terminal domain FY144_09650 PF01979 Amidohydrolase family FY144_09655 PF00583 Acetyltransferase (GNAT) family FY144_09660 PF00128 Alpha amylase, catalytic domain FY144_09665 PF00294 pfkB family carbohydrate kinase FY144_09685 PF01926 50S ribosome-binding GTPase FY144_09685 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY144_09705 PF05992 SbmA/BacA-like family FY144_09715 PF00557 Metallopeptidase family M24 FY144_09730 PF00111 2Fe-2S iron-sulfur cluster binding domain FY144_09730 PF01799 [2Fe-2S] binding domain FY144_09735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY144_09735 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY144_09745 PF03466 LysR substrate binding domain FY144_09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_09765 PF01979 Amidohydrolase family FY144_09775 PF01070 FMN-dependent dehydrogenase FY144_09780 PF00893 Small Multidrug Resistance protein FY144_09785 PF17932 Tetracyclin repressor-like, C-terminal domain FY144_09785 PF00440 Bacterial regulatory proteins, tetR family FY144_09790 PF07943 Penicillin-binding protein 5, C-terminal domain FY144_09790 PF00768 D-alanyl-D-alanine carboxypeptidase FY144_09800 PF00576 HIUase/Transthyretin family FY144_09805 PF04115 Ureidoglycolate lyase FY144_09820 PF09349 OHCU decarboxylase FY144_09820 PF01014 Uricase FY144_09830 PF06299 Protein of unknown function (DUF1045) FY144_09835 PF01266 FAD dependent oxidoreductase FY144_09840 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY144_09840 PF01266 FAD dependent oxidoreductase FY144_09845 PF00072 Response regulator receiver domain FY144_09845 PF01627 Hpt domain FY144_09845 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY144_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_09845 PF00512 His Kinase A (phospho-acceptor) domain FY144_09845 PF00672 HAMP domain FY144_09850 PF00271 Helicase conserved C-terminal domain FY144_09850 PF00270 DEAD/DEAH box helicase FY144_09860 PF01548 Transposase FY144_09860 PF02371 Transposase IS116/IS110/IS902 family FY144_09865 PF07681 DoxX FY144_09870 PF01476 LysM domain FY144_09870 PF03734 L,D-transpeptidase catalytic domain FY144_09880 PF14403 Circularly permuted ATP-grasp type 2 FY144_09885 PF14403 Circularly permuted ATP-grasp type 2 FY144_09885 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY144_09890 PF01841 Transglutaminase-like superfamily FY144_09890 PF08379 Bacterial transglutaminase-like N-terminal region FY144_09910 PF00300 Histidine phosphatase superfamily (branch 1) FY144_09920 PF02653 Branched-chain amino acid transport system / permease component FY144_09925 PF00005 ABC transporter FY144_09930 PF13407 Periplasmic binding protein domain FY144_09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_09935 PF03466 LysR substrate binding domain FY144_10045 PF07690 Major Facilitator Superfamily FY144_10055 PF02574 Homocysteine S-methyltransferase FY144_10055 PF00809 Pterin binding enzyme FY144_10055 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY144_10055 PF02607 B12 binding domain FY144_10055 PF02310 B12 binding domain FY144_10060 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10065 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10070 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_10075 PF00005 ABC transporter FY144_10095 PF00331 Glycosyl hydrolase family 10 FY144_10100 PF00535 Glycosyl transferase family 2 FY144_10115 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY144_10130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY144_10130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY144_10130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY144_10130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY144_10155 PF08362 YcdC-like protein, C-terminal region FY144_10155 PF00440 Bacterial regulatory proteins, tetR family FY144_10160 PF07687 Peptidase dimerisation domain FY144_10160 PF01546 Peptidase family M20/M25/M40 FY144_10165 PF01979 Amidohydrolase family FY144_10170 PF00293 NUDIX domain FY144_10175 PF00005 ABC transporter FY144_10180 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10185 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10200 PF00873 AcrB/AcrD/AcrF family FY144_10215 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY144_10220 PF01730 UreF FY144_10225 PF02814 UreE urease accessory protein, N-terminal domain FY144_10225 PF05194 UreE urease accessory protein, C-terminal domain FY144_10230 PF08534 Redoxin FY144_10240 PF01979 Amidohydrolase family FY144_10240 PF00449 Urease alpha-subunit, N-terminal domain FY144_10255 PF00699 Urease beta subunit FY144_10260 PF06906 Protein of unknown function (DUF1272) FY144_10265 PF00547 Urease, gamma subunit FY144_10270 PF01774 UreD urease accessory protein FY144_10280 PF00005 ABC transporter FY144_10290 PF00005 ABC transporter FY144_10290 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY144_10300 PF02653 Branched-chain amino acid transport system / permease component FY144_10310 PF10931 Protein of unknown function (DUF2735) FY144_10315 PF03951 Glutamine synthetase, beta-Grasp domain FY144_10315 PF00120 Glutamine synthetase, catalytic domain FY144_10325 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY144_10325 PF00512 His Kinase A (phospho-acceptor) domain FY144_10325 PF01627 Hpt domain FY144_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_10325 PF00072 Response regulator receiver domain FY144_10325 PF00989 PAS fold FY144_10330 PF00072 Response regulator receiver domain FY144_10340 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY144_10340 PF01522 Polysaccharide deacetylase FY144_10345 PF13458 Periplasmic binding protein FY144_10355 PF00005 ABC transporter FY144_10360 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY144_10360 PF00005 ABC transporter FY144_10365 PF11862 Domain of unknown function (DUF3382) FY144_10365 PF02653 Branched-chain amino acid transport system / permease component FY144_10370 PF02653 Branched-chain amino acid transport system / permease component FY144_10375 PF00459 Inositol monophosphatase family FY144_10405 PF00486 Transcriptional regulatory protein, C terminal FY144_10405 PF00072 Response regulator receiver domain FY144_10425 PF10090 Histidine phosphotransferase C-terminal domain FY144_10440 PF00588 SpoU rRNA Methylase family FY144_10450 PF00849 RNA pseudouridylate synthase FY144_10460 PF04542 Sigma-70 region 2 FY144_10460 PF00140 Sigma-70 factor, region 1.2 FY144_10460 PF04545 Sigma-70, region 4 FY144_10470 PF00709 Adenylosuccinate synthetase FY144_10495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_10505 PF03167 Uracil DNA glycosylase superfamily FY144_10510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_10515 PF04304 Protein of unknown function (DUF454) FY144_10520 PF00005 ABC transporter FY144_10525 PF01032 FecCD transport family FY144_10530 PF01497 Periplasmic binding protein FY144_10540 PF06228 Haem utilisation ChuX/HutX FY144_10555 PF13443 Cro/C1-type HTH DNA-binding domain FY144_10565 PF00551 Formyl transferase FY144_10570 PF05973 Phage derived protein Gp49-like (DUF891) FY144_10580 PF00672 HAMP domain FY144_10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_10580 PF00512 His Kinase A (phospho-acceptor) domain FY144_10585 PF00072 Response regulator receiver domain FY144_10585 PF00486 Transcriptional regulatory protein, C terminal FY144_10600 PF03401 Tripartite tricarboxylate transporter family receptor FY144_10610 PF01970 Tripartite tricarboxylate transporter TctA family FY144_10625 PF01032 FecCD transport family FY144_10630 PF01032 FecCD transport family FY144_10635 PF00005 ABC transporter FY144_10640 PF00210 Ferritin-like domain FY144_10655 PF00672 HAMP domain FY144_10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_10660 PF00248 Aldo/keto reductase family FY144_10665 PF07690 Major Facilitator Superfamily FY144_10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_10670 PF03466 LysR substrate binding domain FY144_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_10675 PF03466 LysR substrate binding domain FY144_10680 PF07859 alpha/beta hydrolase fold FY144_10685 PF13533 Biotin-lipoyl like FY144_10690 PF00873 AcrB/AcrD/AcrF family FY144_10705 PF13396 Phospholipase_D-nuclease N-terminal FY144_10705 PF13091 PLD-like domain FY144_10710 PF08543 Phosphomethylpyrimidine kinase FY144_10715 PF00484 Carbonic anhydrase FY144_10725 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY144_10725 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY144_10735 PF00083 Sugar (and other) transporter FY144_10740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY144_10740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY144_10740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY144_10745 PF02233 NAD(P) transhydrogenase beta subunit FY144_10750 PF01613 Flavin reductase like domain FY144_10755 PF00881 Nitroreductase family FY144_10760 PF00561 alpha/beta hydrolase fold FY144_10765 PF01042 Endoribonuclease L-PSP FY144_10770 PF00857 Isochorismatase family FY144_10775 PF00296 Luciferase-like monooxygenase FY144_10780 PF01126 Heme oxygenase FY144_10785 PF00701 Dihydrodipicolinate synthetase family FY144_10790 PF00392 Bacterial regulatory proteins, gntR family FY144_10790 PF07729 FCD domain FY144_10800 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10805 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10810 PF00005 ABC transporter FY144_10810 PF03459 TOBE domain FY144_10810 PF17912 MalK OB fold domain FY144_10815 PF00294 pfkB family carbohydrate kinase FY144_10820 PF03576 Peptidase family S58 FY144_10825 PF01063 Amino-transferase class IV FY144_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_10830 PF03466 LysR substrate binding domain FY144_10835 PF00144 Beta-lactamase FY144_10840 PF00005 ABC transporter FY144_10840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_10845 PF00005 ABC transporter FY144_10845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_10850 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10850 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_10855 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_10865 PF01244 Membrane dipeptidase (Peptidase family M19) FY144_10875 PF03706 Lysylphosphatidylglycerol synthase TM region FY144_10875 PF09924 Uncharacterised conserved protein (DUF2156) FY144_10900 PF00775 Dioxygenase FY144_10900 PF04444 Catechol dioxygenase N terminus FY144_10905 PF00465 Iron-containing alcohol dehydrogenase FY144_10910 PF04909 Amidohydrolase FY144_10915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_10915 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY144_10920 PF01613 Flavin reductase like domain FY144_10940 PF00512 His Kinase A (phospho-acceptor) domain FY144_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_10945 PF00486 Transcriptional regulatory protein, C terminal FY144_10945 PF00072 Response regulator receiver domain FY144_10955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY144_10960 PF00005 ABC transporter FY144_10960 PF08402 TOBE domain FY144_10965 PF00528 Binding-protein-dependent transport system inner membrane component FY144_10980 PF00072 Response regulator receiver domain FY144_10980 PF00486 Transcriptional regulatory protein, C terminal FY144_10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_10985 PF00512 His Kinase A (phospho-acceptor) domain FY144_10985 PF13188 PAS domain FY144_10985 PF00072 Response regulator receiver domain FY144_10985 PF08448 PAS fold FY144_10990 PF00202 Aminotransferase class-III FY144_10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_10995 PF03466 LysR substrate binding domain FY144_11000 PF00313 'Cold-shock' DNA-binding domain FY144_11005 PF13005 zinc-finger binding domain of transposase IS66 FY144_11005 PF13007 Transposase C of IS166 homeodomain FY144_11005 PF13817 IS66 C-terminal element FY144_11005 PF03050 Transposase IS66 family FY144_11010 PF05717 IS66 Orf2 like protein FY144_11050 PF01259 SAICAR synthetase FY144_11055 PF00440 Bacterial regulatory proteins, tetR family FY144_11060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY144_11060 PF00529 HlyD membrane-fusion protein of T1SS FY144_11065 PF00873 AcrB/AcrD/AcrF family FY144_11070 PF02321 Outer membrane efflux protein FY144_11075 PF08207 Elongation factor P (EF-P) KOW-like domain FY144_11075 PF01132 Elongation factor P (EF-P) OB domain FY144_11075 PF09285 Elongation factor P, C-terminal FY144_11080 PF00152 tRNA synthetases class II (D, K and N) FY144_11085 PF12544 Lysine-2,3-aminomutase FY144_11085 PF04055 Radical SAM superfamily FY144_11100 PF03466 LysR substrate binding domain FY144_11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_11105 PF01266 FAD dependent oxidoreductase FY144_11115 PF00528 Binding-protein-dependent transport system inner membrane component FY144_11120 PF00005 ABC transporter FY144_11120 PF03459 TOBE domain FY144_11130 PF03576 Peptidase family S58 FY144_11135 PF05690 Thiazole biosynthesis protein ThiG FY144_11145 PF01266 FAD dependent oxidoreductase FY144_11150 PF13667 ThiC-associated domain FY144_11150 PF01964 Radical SAM ThiC family FY144_11160 PF00550 Phosphopantetheine attachment site FY144_11190 PF00005 ABC transporter FY144_11190 PF00664 ABC transporter transmembrane region FY144_11195 PF13545 Crp-like helix-turn-helix domain FY144_11195 PF00027 Cyclic nucleotide-binding domain FY144_11205 PF00672 HAMP domain FY144_11205 PF00211 Adenylate and Guanylate cyclase catalytic domain FY144_11215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY144_11215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY144_11215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY144_11220 PF00534 Glycosyl transferases group 1 FY144_11220 PF13439 Glycosyltransferase Family 4 FY144_11235 PF00005 ABC transporter FY144_11235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_11240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_11245 PF00528 Binding-protein-dependent transport system inner membrane component FY144_11250 PF00528 Binding-protein-dependent transport system inner membrane component FY144_11250 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_11265 PF04101 Glycosyltransferase family 28 C-terminal domain FY144_11265 PF03033 Glycosyltransferase family 28 N-terminal domain FY144_11270 PF03932 CutC family FY144_11275 PF07690 Major Facilitator Superfamily FY144_11285 PF00728 Glycosyl hydrolase family 20, catalytic domain FY144_11285 PF02838 Glycosyl hydrolase family 20, domain 2 FY144_11295 PF01380 SIS domain FY144_11295 PF01418 Helix-turn-helix domain, rpiR family FY144_11305 PF17912 MalK OB fold domain FY144_11305 PF00005 ABC transporter FY144_11310 PF01547 Bacterial extracellular solute-binding protein FY144_11315 PF00528 Binding-protein-dependent transport system inner membrane component FY144_11320 PF00528 Binding-protein-dependent transport system inner membrane component FY144_11335 PF07702 UTRA domain FY144_11335 PF00392 Bacterial regulatory proteins, gntR family FY144_11340 PF01380 SIS domain FY144_11345 PF01979 Amidohydrolase family FY144_11350 PF00480 ROK family FY144_11355 PF01494 FAD binding domain FY144_11360 PF01569 PAP2 superfamily FY144_11365 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY144_11365 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY144_11365 PF13288 DXP reductoisomerase C-terminal domain FY144_11370 PF00155 Aminotransferase class I and II FY144_11380 PF17243 POTRA domain TamA domain 1 FY144_11380 PF01103 Surface antigen FY144_11380 PF07244 Surface antigen variable number repeat FY144_11390 PF01584 CheW-like domain FY144_11395 PF08447 PAS fold FY144_11395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_11395 PF13426 PAS domain FY144_11400 PF02634 FdhD/NarQ family FY144_11405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY144_11410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY144_11410 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY144_11415 PF00231 ATP synthase FY144_11420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY144_11420 PF00306 ATP synthase alpha/beta chain, C terminal domain FY144_11420 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY144_11425 PF00213 ATP synthase delta (OSCP) subunit FY144_11435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY144_11435 PF18074 Primosomal protein N C-terminal domain FY144_11435 PF17764 3′ DNA-binding domain (3′BD) FY144_11435 PF00270 DEAD/DEAH box helicase FY144_11440 PF00589 Phage integrase family FY144_11440 PF02899 Phage integrase, N-terminal SAM-like domain FY144_11460 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_11460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY144_11465 PF01810 LysE type translocator FY144_11475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY144_11475 PF00364 Biotin-requiring enzyme FY144_11475 PF02817 e3 binding domain FY144_11480 PF16078 2-oxoglutarate dehydrogenase N-terminus FY144_11480 PF16870 2-oxoglutarate dehydrogenase C-terminal FY144_11480 PF02779 Transketolase, pyrimidine binding domain FY144_11480 PF00676 Dehydrogenase E1 component FY144_11485 PF02629 CoA binding domain FY144_11485 PF00549 CoA-ligase FY144_11490 PF00549 CoA-ligase FY144_11490 PF08442 ATP-grasp domain FY144_11495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY144_11495 PF00056 lactate/malate dehydrogenase, NAD binding domain FY144_11500 PF03969 AFG1-like ATPase FY144_11505 PF02974 Protease inhibitor Inh FY144_11510 PF13085 2Fe-2S iron-sulfur cluster binding domain FY144_11510 PF13237 4Fe-4S dicluster domain FY144_11515 PF00890 FAD binding domain FY144_11515 PF02910 Fumarate reductase flavoprotein C-term FY144_11525 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY144_11550 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY144_11550 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY144_11555 PF00814 Glycoprotease family FY144_11560 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY144_11560 PF03900 Porphobilinogen deaminase, C-terminal domain FY144_11585 PF00117 Glutamine amidotransferase class-I FY144_11595 PF02325 YGGT family FY144_11600 PF02594 Uncharacterised ACR, YggU family COG1872 FY144_11605 PF00719 Inorganic pyrophosphatase FY144_11615 PF00679 Elongation factor G C-terminus FY144_11615 PF00009 Elongation factor Tu GTP binding domain FY144_11615 PF03144 Elongation factor Tu domain 2 FY144_11620 PF01432 Peptidase family M3 FY144_11625 PF01047 MarR family FY144_11630 PF07690 Major Facilitator Superfamily FY144_11635 PF00764 Arginosuccinate synthase FY144_11640 PF00106 short chain dehydrogenase FY144_11645 PF01810 LysE type translocator FY144_11650 PF00005 ABC transporter FY144_11655 PF02653 Branched-chain amino acid transport system / permease component FY144_11665 PF04055 Radical SAM superfamily FY144_11680 PF01329 Pterin 4 alpha carbinolamine dehydratase FY144_11685 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY144_11690 PF02834 LigT like Phosphoesterase FY144_11695 PF13472 GDSL-like Lipase/Acylhydrolase family FY144_11700 PF00005 ABC transporter FY144_11710 PF01027 Inhibitor of apoptosis-promoting Bax1 FY144_11725 PF00330 Aconitase family (aconitate hydratase) FY144_11725 PF00694 Aconitase C-terminal domain FY144_11730 PF00005 ABC transporter FY144_11735 PF03379 CcmB protein FY144_11740 PF01578 Cytochrome C assembly protein FY144_11750 PF08534 Redoxin FY144_11755 PF00990 Diguanylate cyclase, GGDEF domain FY144_11760 PF10755 Protein of unknown function (DUF2585) FY144_11765 PF04279 Intracellular septation protein A FY144_11770 PF02881 SRP54-type protein, helical bundle domain FY144_11770 PF00448 SRP54-type protein, GTPase domain FY144_11775 PF04055 Radical SAM superfamily FY144_11775 PF00919 Uncharacterized protein family UPF0004 FY144_11780 PF01678 Diaminopimelate epimerase FY144_11785 PF12706 Beta-lactamase superfamily domain FY144_11795 PF00448 SRP54-type protein, GTPase domain FY144_11795 PF02881 SRP54-type protein, helical bundle domain FY144_11795 PF02978 Signal peptide binding domain FY144_11800 PF01817 Chorismate mutase type II FY144_11800 PF02153 Prephenate dehydrogenase FY144_11805 PF00886 Ribosomal protein S16 FY144_11810 PF05239 PRC-barrel domain FY144_11810 PF01782 RimM N-terminal domain FY144_11815 PF01746 tRNA (Guanine-1)-methyltransferase FY144_11825 PF01245 Ribosomal protein L19 FY144_11830 PF00005 ABC transporter FY144_11830 PF00664 ABC transporter transmembrane region FY144_11835 PF00529 HlyD membrane-fusion protein of T1SS FY144_11835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY144_11845 PF07690 Major Facilitator Superfamily FY144_11850 PF00330 Aconitase family (aconitate hydratase) FY144_11865 PF01435 Peptidase family M48 FY144_11870 PF00005 ABC transporter FY144_11875 PF00528 Binding-protein-dependent transport system inner membrane component FY144_11880 PF01547 Bacterial extracellular solute-binding protein FY144_11890 PF00005 ABC transporter FY144_11890 PF16326 ABC transporter C-terminal domain FY144_11900 PF04204 Homoserine O-succinyltransferase FY144_11905 PF01263 Aldose 1-epimerase FY144_11910 PF00912 Transglycosylase FY144_11915 PF00348 Polyprenyl synthetase FY144_11920 PF00691 OmpA family FY144_11920 PF13488 Glycine zipper FY144_11925 PF04551 GcpE protein FY144_11930 PF07690 Major Facilitator Superfamily FY144_11935 PF00455 DeoR C terminal sensor domain FY144_11935 PF08220 DeoR-like helix-turn-helix domain FY144_11940 PF02785 Biotin carboxylase C-terminal domain FY144_11940 PF00289 Biotin carboxylase, N-terminal domain FY144_11940 PF00364 Biotin-requiring enzyme FY144_11940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY144_11940 PF00682 HMGL-like FY144_11940 PF02436 Conserved carboxylase domain FY144_11945 PF00196 Bacterial regulatory proteins, luxR family FY144_11945 PF00072 Response regulator receiver domain FY144_11950 PF00664 ABC transporter transmembrane region FY144_11950 PF00005 ABC transporter FY144_11960 PF10091 Putative glucoamylase FY144_11960 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY144_11960 PF06165 Glycosyltransferase family 36 FY144_11965 PF07687 Peptidase dimerisation domain FY144_11965 PF01546 Peptidase family M20/M25/M40 FY144_11970 PF01266 FAD dependent oxidoreductase FY144_11975 PF00291 Pyridoxal-phosphate dependent enzyme FY144_11980 PF00920 Dehydratase family FY144_11985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY144_11985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY144_11990 PF01370 NAD dependent epimerase/dehydratase family FY144_11995 PF01565 FAD binding domain FY144_11995 PF02913 FAD linked oxidases, C-terminal domain FY144_12000 PF07729 FCD domain FY144_12000 PF00392 Bacterial regulatory proteins, gntR family FY144_12010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY144_12015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_12020 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_12025 PF13193 AMP-binding enzyme C-terminal domain FY144_12025 PF00501 AMP-binding enzyme FY144_12025 PF16177 Acetyl-coenzyme A synthetase N-terminus FY144_12035 PF01168 Alanine racemase, N-terminal domain FY144_12040 PF08264 Anticodon-binding domain of tRNA FY144_12040 PF00133 tRNA synthetases class I (I, L, M and V) FY144_12040 PF13603 Leucyl-tRNA synthetase, Domain 2 FY144_12055 PF11953 Domain of unknown function (DUF3470) FY144_12055 PF00037 4Fe-4S binding domain FY144_12060 PF01479 S4 domain FY144_12060 PF00579 tRNA synthetases class I (W and Y) FY144_12075 PF01494 FAD binding domain FY144_12085 PF00543 Nitrogen regulatory protein P-II FY144_12090 PF00909 Ammonium Transporter Family FY144_12095 PF09397 Ftsk gamma domain FY144_12095 PF01580 FtsK/SpoIIIE family FY144_12095 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY144_12095 PF17854 FtsK alpha domain FY144_12100 PF03548 Outer membrane lipoprotein carrier protein LolA FY144_12115 PF00072 Response regulator receiver domain FY144_12115 PF00486 Transcriptional regulatory protein, C terminal FY144_12125 PF02559 CarD-like/TRCF domain FY144_12130 PF05088 Bacterial NAD-glutamate dehydrogenase FY144_12135 PF11700 Vacuole effluxer Atg22 like FY144_12140 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY144_12140 PF05233 PHB accumulation regulatory domain FY144_12145 PF02803 Thiolase, C-terminal domain FY144_12145 PF00108 Thiolase, N-terminal domain FY144_12160 PF00210 Ferritin-like domain FY144_12165 PF00293 NUDIX domain FY144_12170 PF04748 Divergent polysaccharide deacetylase FY144_12175 PF13180 PDZ domain FY144_12175 PF03572 Peptidase family S41 FY144_12185 PF02590 Predicted SPOUT methyltransferase FY144_12195 PF01467 Cytidylyltransferase-like FY144_12200 PF00171 Aldehyde dehydrogenase family FY144_12205 PF00696 Amino acid kinase family FY144_12205 PF01472 PUA domain FY144_12210 PF01018 GTP1/OBG FY144_12210 PF01926 50S ribosome-binding GTPase FY144_12215 PF13302 Acetyltransferase (GNAT) domain FY144_12225 PF01016 Ribosomal L27 protein FY144_12230 PF00829 Ribosomal prokaryotic L21 protein FY144_12245 PF03328 HpcH/HpaI aldolase/citrate lyase family FY144_12255 PF00694 Aconitase C-terminal domain FY144_12260 PF00180 Isocitrate/isopropylmalate dehydrogenase FY144_12265 PF03150 Di-haem cytochrome c peroxidase FY144_12270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY144_12270 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY144_12275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_12280 PF01888 CbiD FY144_12285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_12295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_12300 PF02571 Precorrin-6x reductase CbiJ/CobK FY144_12305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_12310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_12315 PF02570 Precorrin-8X methylmutase FY144_12320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY144_12325 PF02514 CobN/Magnesium Chelatase FY144_12330 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY144_12330 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY144_12340 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY144_12345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY144_12345 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY144_12350 PF03186 CobD/Cbib protein FY144_12355 PF00155 Aminotransferase class I and II FY144_12360 PF13378 Enolase C-terminal domain-like FY144_12360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_12365 PF05336 L-rhamnose mutarotase FY144_12370 PF08125 Mannitol dehydrogenase C-terminal domain FY144_12370 PF01232 Mannitol dehydrogenase Rossmann domain FY144_12375 PF08240 Alcohol dehydrogenase GroES-like domain FY144_12375 PF00107 Zinc-binding dehydrogenase FY144_12385 PF00248 Aldo/keto reductase family FY144_12395 PF02653 Branched-chain amino acid transport system / permease component FY144_12400 PF00005 ABC transporter FY144_12405 PF07729 FCD domain FY144_12405 PF00392 Bacterial regulatory proteins, gntR family FY144_12410 PF08666 SAF domain FY144_12410 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY144_12415 PF01808 AICARFT/IMPCHase bienzyme FY144_12415 PF02142 MGS-like domain FY144_12425 PF01189 16S rRNA methyltransferase RsmB/F FY144_12425 PF01029 NusB family FY144_12430 PF01435 Peptidase family M48 FY144_12440 PF17762 HTH domain found in ParB protein FY144_12440 PF02195 ParB-like nuclease domain FY144_12445 PF13614 AAA domain FY144_12450 PF02527 rRNA small subunit methyltransferase G FY144_12455 PF01134 Glucose inhibited division protein A FY144_12455 PF13932 GidA associated domain FY144_12460 PF01926 50S ribosome-binding GTPase FY144_12460 PF12631 MnmE helical domain FY144_12460 PF10396 GTP-binding protein TrmE N-terminus FY144_12465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY144_12465 PF07497 Rho termination factor, RNA-binding domain FY144_12465 PF07498 Rho termination factor, N-terminal domain FY144_12470 PF03653 Uncharacterised protein family (UPF0093) FY144_12475 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY144_12480 PF03618 Kinase/pyrophosphorylase FY144_12485 PF02545 Maf-like protein FY144_12490 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY144_12490 PF01488 Shikimate / quinate 5-dehydrogenase FY144_12490 PF08501 Shikimate dehydrogenase substrate binding domain FY144_12495 PF01121 Dephospho-CoA kinase FY144_12500 PF00929 Exonuclease FY144_12505 PF02556 Preprotein translocase subunit SecB FY144_12510 PF04186 FxsA cytoplasmic membrane protein FY144_12520 PF06725 3D domain FY144_12520 PF03562 MltA specific insert domain FY144_12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_12535 PF01751 Toprim domain FY144_12535 PF00986 DNA gyrase B subunit, carboxyl terminus FY144_12535 PF00204 DNA gyrase B FY144_12545 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY144_12560 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY144_12565 PF00291 Pyridoxal-phosphate dependent enzyme FY144_12570 PF00290 Tryptophan synthase alpha chain FY144_12575 PF01039 Carboxyl transferase domain FY144_12580 PF02875 Mur ligase family, glutamate ligase domain FY144_12580 PF08245 Mur ligase middle domain FY144_12585 PF00085 Thioredoxin FY144_12590 PF12705 PD-(D/E)XK nuclease superfamily FY144_12590 PF00580 UvrD/REP helicase N-terminal domain FY144_12590 PF13361 UvrD-like helicase C-terminal domain FY144_12600 PF12804 MobA-like NTP transferase domain FY144_12605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY144_12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_12610 PF00512 His Kinase A (phospho-acceptor) domain FY144_12615 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY144_12615 PF05221 S-adenosyl-L-homocysteine hydrolase FY144_12620 PF00381 PTS HPr component phosphorylation site FY144_12625 PF03610 PTS system fructose IIA component FY144_12625 PF03830 PTS system sorbose subfamily IIB component FY144_12630 PF07475 HPr Serine kinase C-terminal domain FY144_12630 PF02603 HPr Serine kinase N terminus FY144_12635 PF00672 HAMP domain FY144_12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_12635 PF00512 His Kinase A (phospho-acceptor) domain FY144_12635 PF13755 Sensor N-terminal transmembrane domain FY144_12635 PF13756 Stimulus-sensing domain FY144_12640 PF00072 Response regulator receiver domain FY144_12640 PF00486 Transcriptional regulatory protein, C terminal FY144_12645 PF01293 Phosphoenolpyruvate carboxykinase FY144_12650 PF00472 RF-1 domain FY144_12655 PF04972 BON domain FY144_12655 PF01476 LysM domain FY144_12660 PF00485 Phosphoribulokinase / Uridine kinase family FY144_12665 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY144_12670 PF00977 Histidine biosynthesis protein FY144_12675 PF00977 Histidine biosynthesis protein FY144_12680 PF00117 Glutamine amidotransferase class-I FY144_12690 PF00475 Imidazoleglycerol-phosphate dehydratase FY144_12695 PF00227 Proteasome subunit FY144_12700 PF07724 AAA domain (Cdc48 subfamily) FY144_12700 PF10431 C-terminal, D2-small domain, of ClpB protein FY144_12700 PF00004 ATPase family associated with various cellular activities (AAA) FY144_12710 PF01274 Malate synthase FY144_12725 PF00072 Response regulator receiver domain FY144_12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_12730 PF00512 His Kinase A (phospho-acceptor) domain FY144_12735 PF08482 ATP-dependent helicase C-terminal FY144_12735 PF04408 Helicase associated domain (HA2) FY144_12735 PF00271 Helicase conserved C-terminal domain FY144_12735 PF00270 DEAD/DEAH box helicase FY144_12770 PF00270 DEAD/DEAH box helicase FY144_12770 PF00271 Helicase conserved C-terminal domain FY144_12770 PF00570 HRDC domain FY144_12770 PF16124 RecQ zinc-binding FY144_12770 PF09382 RQC domain FY144_12775 PF00480 ROK family FY144_12780 PF13407 Periplasmic binding protein domain FY144_12785 PF02653 Branched-chain amino acid transport system / permease component FY144_12790 PF00005 ABC transporter FY144_12795 PF00485 Phosphoribulokinase / Uridine kinase family FY144_12800 PF00462 Glutaredoxin FY144_12805 PF07972 NrdI Flavodoxin like FY144_12810 PF08343 Ribonucleotide reductase N-terminal FY144_12810 PF00317 Ribonucleotide reductase, all-alpha domain FY144_12810 PF02867 Ribonucleotide reductase, barrel domain FY144_12815 PF00268 Ribonucleotide reductase, small chain FY144_12825 PF02463 RecF/RecN/SMC N terminal domain FY144_12830 PF00581 Rhodanese-like domain FY144_12830 PF00899 ThiF family FY144_12845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_12845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_12855 PF00294 pfkB family carbohydrate kinase FY144_12865 PF05175 Methyltransferase small domain FY144_12865 PF08468 Methyltransferase small domain N-terminal FY144_12870 PF00013 KH domain FY144_12870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY144_12870 PF01138 3' exoribonuclease family, domain 1 FY144_12870 PF03725 3' exoribonuclease family, domain 2 FY144_12870 PF00575 S1 RNA binding domain FY144_12875 PF00312 Ribosomal protein S15 FY144_12880 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY144_12880 PF09157 Pseudouridine synthase II TruB, C-terminal FY144_12880 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY144_12885 PF02033 Ribosome-binding factor A FY144_12890 PF08364 Bacterial translation initiation factor IF-2 associated region FY144_12890 PF11987 Translation-initiation factor 2 FY144_12890 PF00009 Elongation factor Tu GTP binding domain FY144_12890 PF04760 Translation initiation factor IF-2, N-terminal region FY144_12890 PF03144 Elongation factor Tu domain 2 FY144_12900 PF00575 S1 RNA binding domain FY144_12900 PF08529 NusA N-terminal domain FY144_12900 PF13184 NusA-like KH domain FY144_12905 PF02576 RimP N-terminal domain FY144_12905 PF17384 RimP C-terminal SH3 domain FY144_12910 PF05977 Transmembrane secretion effector FY144_12915 PF13406 Transglycosylase SLT domain FY144_12920 PF13662 Toprim domain FY144_12920 PF02132 RecR protein FY144_12930 PF02575 YbaB/EbfC DNA-binding family FY144_12935 PF12169 DNA polymerase III subunits gamma and tau domain III FY144_12935 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY144_12935 PF12170 DNA polymerase III tau subunit V interacting with alpha FY144_12950 PF00293 NUDIX domain FY144_12950 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY144_12950 PF09297 NADH pyrophosphatase zinc ribbon domain FY144_12955 PF01817 Chorismate mutase type II FY144_12955 PF00800 Prephenate dehydratase FY144_12960 PF02348 Cytidylyltransferase FY144_12965 PF00034 Cytochrome c FY144_12970 PF02397 Bacterial sugar transferase FY144_12975 PF00905 Penicillin binding protein transpeptidase domain FY144_12975 PF00912 Transglycosylase FY144_12980 PF04073 Aminoacyl-tRNA editing domain FY144_12985 PF00313 'Cold-shock' DNA-binding domain FY144_12990 PF01546 Peptidase family M20/M25/M40 FY144_12990 PF07687 Peptidase dimerisation domain FY144_12995 PF01047 MarR family FY144_13000 PF01612 3'-5' exonuclease FY144_13000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY144_13000 PF01367 5'-3' exonuclease, C-terminal SAM fold FY144_13000 PF00476 DNA polymerase family A FY144_13005 PF01783 Ribosomal L32p protein family FY144_13010 PF02743 Cache domain FY144_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_13010 PF00512 His Kinase A (phospho-acceptor) domain FY144_13015 PF00072 Response regulator receiver domain FY144_13015 PF00158 Sigma-54 interaction domain FY144_13015 PF02954 Bacterial regulatory protein, Fis family FY144_13020 PF03401 Tripartite tricarboxylate transporter family receptor FY144_13025 PF07331 Tripartite tricarboxylate transporter TctB family FY144_13030 PF01970 Tripartite tricarboxylate transporter TctA family FY144_13035 PF04102 SlyX FY144_13045 PF00226 DnaJ domain FY144_13045 PF01556 DnaJ C terminal domain FY144_13045 PF00684 DnaJ central domain FY144_13050 PF00012 Hsp70 protein FY144_13065 PF01625 Peptide methionine sulfoxide reductase FY144_13070 PF02608 ABC transporter substrate-binding protein PnrA-like FY144_13075 PF00005 ABC transporter FY144_13080 PF02653 Branched-chain amino acid transport system / permease component FY144_13085 PF02653 Branched-chain amino acid transport system / permease component FY144_13090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY144_13095 PF01048 Phosphorylase superfamily FY144_13100 PF01791 DeoC/LacD family aldolase FY144_13105 PF02885 Glycosyl transferase family, helical bundle domain FY144_13105 PF00591 Glycosyl transferase family, a/b domain FY144_13105 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY144_13120 PF00962 Adenosine/AMP deaminase FY144_13125 PF01676 Metalloenzyme superfamily FY144_13135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY144_13140 PF00510 Cytochrome c oxidase subunit III FY144_13145 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY144_13150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY144_13150 PF06481 COX Aromatic Rich Motif FY144_13155 PF00083 Sugar (and other) transporter FY144_13155 PF07690 Major Facilitator Superfamily FY144_13160 PF00310 Glutamine amidotransferases class-II FY144_13160 PF01493 GXGXG motif FY144_13160 PF04898 Glutamate synthase central domain FY144_13160 PF01645 Conserved region in glutamate synthase FY144_13165 PF00667 FAD binding domain FY144_13165 PF00258 Flavodoxin FY144_13165 PF00175 Oxidoreductase NAD-binding domain FY144_13185 PF00109 Beta-ketoacyl synthase, N-terminal domain FY144_13185 PF02801 Beta-ketoacyl synthase, C-terminal domain FY144_13190 PF07977 FabA-like domain FY144_13200 PF03458 UPF0126 domain FY144_13210 PF06912 Protein of unknown function (DUF1275) FY144_13220 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13225 PF00005 ABC transporter FY144_13230 PF00392 Bacterial regulatory proteins, gntR family FY144_13230 PF07702 UTRA domain FY144_13235 PF01618 MotA/TolQ/ExbB proton channel family FY144_13240 PF02472 Biopolymer transport protein ExbD/TolR FY144_13250 PF02615 Malate/L-lactate dehydrogenase FY144_13265 PF00625 Guanylate kinase FY144_13270 PF07969 Amidohydrolase family FY144_13275 PF06299 Protein of unknown function (DUF1045) FY144_13280 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13285 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13295 PF00005 ABC transporter FY144_13305 PF00005 ABC transporter FY144_13310 PF00005 ABC transporter FY144_13315 PF06007 Phosphonate metabolism protein PhnJ FY144_13320 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY144_13325 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY144_13330 PF06754 Phosphonate metabolism protein PhnG FY144_13335 PF00392 Bacterial regulatory proteins, gntR family FY144_13335 PF07702 UTRA domain FY144_13340 PF05173 Dihydrodipicolinate reductase, C-terminus FY144_13340 PF01113 Dihydrodipicolinate reductase, N-terminus FY144_13345 PF02685 Glucokinase FY144_13350 PF02142 MGS-like domain FY144_13355 PF03411 Penicillin-insensitive murein endopeptidase FY144_13360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_13365 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13370 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13370 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_13375 PF00005 ABC transporter FY144_13375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_13380 PF01266 FAD dependent oxidoreductase FY144_13385 PF00120 Glutamine synthetase, catalytic domain FY144_13390 PF01266 FAD dependent oxidoreductase FY144_13400 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13405 PF00005 ABC transporter FY144_13410 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY144_13425 PF02082 Transcriptional regulator FY144_13430 PF13416 Bacterial extracellular solute-binding protein FY144_13435 PF01435 Peptidase family M48 FY144_13440 PF05987 Bacterial protein of unknown function (DUF898) FY144_13445 PF00171 Aldehyde dehydrogenase family FY144_13450 PF03466 LysR substrate binding domain FY144_13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_13455 PF00892 EamA-like transporter family FY144_13470 PF00877 NlpC/P60 family FY144_13480 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY144_13480 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY144_13485 PF00883 Cytosol aminopeptidase family, catalytic domain FY144_13485 PF02789 Cytosol aminopeptidase family, N-terminal domain FY144_13505 PF00437 Type II/IV secretion system protein FY144_13520 PF00263 Bacterial type II and III secretion system protein FY144_13520 PF04972 BON domain FY144_13520 PF13629 Pilus formation protein N terminal region FY144_13560 PF00117 Glutamine amidotransferase class-I FY144_13565 PF07411 Domain of unknown function (DUF1508) FY144_13570 PF01183 Glycosyl hydrolases family 25 FY144_13575 PF00892 EamA-like transporter family FY144_13580 PF00155 Aminotransferase class I and II FY144_13580 PF00392 Bacterial regulatory proteins, gntR family FY144_13595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_13610 PF00009 Elongation factor Tu GTP binding domain FY144_13610 PF00679 Elongation factor G C-terminus FY144_13610 PF03144 Elongation factor Tu domain 2 FY144_13610 PF06421 GTP-binding protein LepA C-terminus FY144_13615 PF00795 Carbon-nitrogen hydrolase FY144_13645 PF12833 Helix-turn-helix domain FY144_13645 PF02311 AraC-like ligand binding domain FY144_13650 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_13675 PF00707 Translation initiation factor IF-3, C-terminal domain FY144_13675 PF05198 Translation initiation factor IF-3, N-terminal domain FY144_13680 PF01632 Ribosomal protein L35 FY144_13685 PF00453 Ribosomal protein L20 FY144_13695 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY144_13695 PF01409 tRNA synthetases class II core domain (F) FY144_13700 PF03483 B3/4 domain FY144_13700 PF03484 tRNA synthetase B5 domain FY144_13700 PF01588 Putative tRNA binding domain FY144_13700 PF03147 Ferredoxin-fold anticodon binding domain FY144_13700 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY144_13705 PF00248 Aldo/keto reductase family FY144_13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_13710 PF03466 LysR substrate binding domain FY144_13720 PF00248 Aldo/keto reductase family FY144_13725 PF12833 Helix-turn-helix domain FY144_13725 PF01965 DJ-1/PfpI family FY144_13735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_13735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_13750 PF02601 Exonuclease VII, large subunit FY144_13750 PF13742 OB-fold nucleic acid binding domain FY144_13755 PF13378 Enolase C-terminal domain-like FY144_13755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_13760 PF07729 FCD domain FY144_13760 PF00392 Bacterial regulatory proteins, gntR family FY144_13765 PF01047 MarR family FY144_13770 PF00892 EamA-like transporter family FY144_13775 PF02073 Thermophilic metalloprotease (M29) FY144_13780 PF04073 Aminoacyl-tRNA editing domain FY144_13785 PF03960 ArsC family FY144_13800 PF00440 Bacterial regulatory proteins, tetR family FY144_13810 PF00958 GMP synthase C terminal domain FY144_13810 PF00117 Glutamine amidotransferase class-I FY144_13825 PF03073 TspO/MBR family FY144_13850 PF01189 16S rRNA methyltransferase RsmB/F FY144_13850 PF01029 NusB family FY144_13855 PF03330 Lytic transglycolase FY144_13865 PF08331 Domain of unknown function (DUF1730) FY144_13870 PF13417 Glutathione S-transferase, N-terminal domain FY144_13870 PF00043 Glutathione S-transferase, C-terminal domain FY144_13875 PF02673 Bacitracin resistance protein BacA FY144_13890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY144_13900 PF00398 Ribosomal RNA adenine dimethylase FY144_13905 PF00712 DNA polymerase III beta subunit, N-terminal domain FY144_13905 PF02767 DNA polymerase III beta subunit, central domain FY144_13905 PF02768 DNA polymerase III beta subunit, C-terminal domain FY144_13910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_13915 PF02021 Uncharacterised protein family UPF0102 FY144_13920 PF14602 Hexapeptide repeat of succinyl-transferase FY144_13920 PF12464 Maltose acetyltransferase FY144_13925 PF13416 Bacterial extracellular solute-binding protein FY144_13930 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13935 PF00528 Binding-protein-dependent transport system inner membrane component FY144_13940 PF00005 ABC transporter FY144_13950 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY144_13950 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY144_13955 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY144_13955 PF01078 Magnesium chelatase, subunit ChlI FY144_13960 PF00291 Pyridoxal-phosphate dependent enzyme FY144_13965 PF01810 LysE type translocator FY144_13970 PF00692 dUTPase FY144_13975 PF16658 Class II release factor RF3, C-terminal domain FY144_13975 PF00009 Elongation factor Tu GTP binding domain FY144_13975 PF03144 Elongation factor Tu domain 2 FY144_13980 PF02441 Flavoprotein FY144_13980 PF04127 DNA / pantothenate metabolism flavoprotein FY144_13995 PF03109 ABC1 family FY144_14000 PF01209 ubiE/COQ5 methyltransferase family FY144_14005 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY144_14005 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY144_14005 PF06827 Zinc finger found in FPG and IleRS FY144_14010 PF00378 Enoyl-CoA hydratase/isomerase FY144_14015 PF01649 Ribosomal protein S20 FY144_14025 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FY144_14060 PF00561 alpha/beta hydrolase fold FY144_14105 PF05717 IS66 Orf2 like protein FY144_14110 PF13005 zinc-finger binding domain of transposase IS66 FY144_14110 PF03050 Transposase IS66 family FY144_14110 PF13817 IS66 C-terminal element FY144_14110 PF13007 Transposase C of IS166 homeodomain FY144_14135 PF01165 Ribosomal protein S21 FY144_14145 PF00654 Voltage gated chloride channel FY144_14170 PF07690 Major Facilitator Superfamily FY144_14175 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY144_14180 PF09386 Antitoxin ParD FY144_14190 PF12900 Pyridoxamine 5'-phosphate oxidase FY144_14195 PF06772 Bacterial low temperature requirement A protein (LtrA) FY144_14205 PF00924 Mechanosensitive ion channel FY144_14225 PF12951 Passenger-associated-transport-repeat FY144_14250 PF00990 Diguanylate cyclase, GGDEF domain FY144_14260 PF00144 Beta-lactamase FY144_14270 PF12951 Passenger-associated-transport-repeat FY144_14275 PF03734 L,D-transpeptidase catalytic domain FY144_14275 PF17969 L,D-transpeptidase C-terminal domain FY144_14290 PF16868 NMT1-like family FY144_14305 PF07729 FCD domain FY144_14305 PF00392 Bacterial regulatory proteins, gntR family FY144_14310 PF00005 ABC transporter FY144_14310 PF17912 MalK OB fold domain FY144_14315 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14320 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14325 PF01547 Bacterial extracellular solute-binding protein FY144_14345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_14345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_14355 PF13378 Enolase C-terminal domain-like FY144_14355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_14375 PF02371 Transposase IS116/IS110/IS902 family FY144_14375 PF01548 Transposase FY144_14385 PF00106 short chain dehydrogenase FY144_14390 PF02798 Glutathione S-transferase, N-terminal domain FY144_14395 PF00873 AcrB/AcrD/AcrF family FY144_14405 PF00440 Bacterial regulatory proteins, tetR family FY144_14410 PF02801 Beta-ketoacyl synthase, C-terminal domain FY144_14410 PF00109 Beta-ketoacyl synthase, N-terminal domain FY144_14415 PF12327 FtsZ family, C-terminal domain FY144_14415 PF00091 Tubulin/FtsZ family, GTPase domain FY144_14430 PF01554 MatE FY144_14480 PF00313 'Cold-shock' DNA-binding domain FY144_14540 PF00005 ABC transporter FY144_14540 PF06472 ABC transporter transmembrane region 2 FY144_14560 PF00561 alpha/beta hydrolase fold FY144_14565 PF03466 LysR substrate binding domain FY144_14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_14575 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14580 PF00005 ABC transporter FY144_14585 PF13378 Enolase C-terminal domain-like FY144_14585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_14590 PF01266 FAD dependent oxidoreductase FY144_14595 PF03466 LysR substrate binding domain FY144_14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_14600 PF07690 Major Facilitator Superfamily FY144_14625 PF01037 Lrp/AsnC ligand binding domain FY144_14630 PF00171 Aldehyde dehydrogenase family FY144_14635 PF00202 Aminotransferase class-III FY144_14640 PF00155 Aminotransferase class I and II FY144_14640 PF00392 Bacterial regulatory proteins, gntR family FY144_14645 PF00291 Pyridoxal-phosphate dependent enzyme FY144_14650 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY144_14655 PF01321 Creatinase/Prolidase N-terminal domain FY144_14655 PF00557 Metallopeptidase family M24 FY144_14660 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FY144_14665 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_14670 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14675 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14680 PF00005 ABC transporter FY144_14690 PF01261 Xylose isomerase-like TIM barrel FY144_14695 PF00485 Phosphoribulokinase / Uridine kinase family FY144_14700 PF01261 Xylose isomerase-like TIM barrel FY144_14705 PF02653 Branched-chain amino acid transport system / permease component FY144_14710 PF02653 Branched-chain amino acid transport system / permease component FY144_14715 PF00005 ABC transporter FY144_14725 PF00356 Bacterial regulatory proteins, lacI family FY144_14735 PF00158 Sigma-54 interaction domain FY144_14735 PF01590 GAF domain FY144_14735 PF02954 Bacterial regulatory protein, Fis family FY144_14740 PF08240 Alcohol dehydrogenase GroES-like domain FY144_14740 PF00107 Zinc-binding dehydrogenase FY144_14750 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_14755 PF00330 Aconitase family (aconitate hydratase) FY144_14755 PF06434 Aconitate hydratase 2 N-terminus FY144_14755 PF11791 Aconitate B N-terminal domain FY144_14770 PF13953 PapC C-terminal domain FY144_14770 PF00577 Outer membrane usher protein FY144_14770 PF13954 PapC N-terminal domain FY144_14780 PF00005 ABC transporter FY144_14785 PF00664 ABC transporter transmembrane region FY144_14785 PF00005 ABC transporter FY144_14790 PF03401 Tripartite tricarboxylate transporter family receptor FY144_14795 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY144_14795 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY144_14805 PF05532 CsbD-like FY144_14825 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14830 PF00005 ABC transporter FY144_14830 PF08402 TOBE domain FY144_14840 PF00459 Inositol monophosphatase family FY144_14845 PF00005 ABC transporter FY144_14845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_14855 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14855 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_14860 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_14870 PF07729 FCD domain FY144_14870 PF00392 Bacterial regulatory proteins, gntR family FY144_14880 PF13378 Enolase C-terminal domain-like FY144_14880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_14885 PF00005 ABC transporter FY144_14885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_14890 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_14890 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14895 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_14905 PF00392 Bacterial regulatory proteins, gntR family FY144_14905 PF07729 FCD domain FY144_14910 PF08450 SMP-30/Gluconolactonase/LRE-like region FY144_14915 PF00701 Dihydrodipicolinate synthetase family FY144_14920 PF07690 Major Facilitator Superfamily FY144_14930 PF00037 4Fe-4S binding domain FY144_14930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY144_14930 PF01568 Molydopterin dinucleotide binding domain FY144_14930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY144_14930 PF00384 Molybdopterin oxidoreductase FY144_14935 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY144_14935 PF00037 4Fe-4S binding domain FY144_14935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY144_14945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_14945 PF03466 LysR substrate binding domain FY144_14950 PF00990 Diguanylate cyclase, GGDEF domain FY144_14950 PF00563 EAL domain FY144_14950 PF03707 Bacterial signalling protein N terminal repeat FY144_14955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_14955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_14960 PF00005 ABC transporter FY144_14965 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14970 PF00528 Binding-protein-dependent transport system inner membrane component FY144_14975 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_14985 PF00356 Bacterial regulatory proteins, lacI family FY144_14990 PF05544 Proline racemase FY144_15000 PF01266 FAD dependent oxidoreductase FY144_15005 PF00005 ABC transporter FY144_15010 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15015 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15030 PF02615 Malate/L-lactate dehydrogenase FY144_15035 PF00701 Dihydrodipicolinate synthetase family FY144_15040 PF07729 FCD domain FY144_15040 PF00392 Bacterial regulatory proteins, gntR family FY144_15045 PF12327 FtsZ family, C-terminal domain FY144_15045 PF00091 Tubulin/FtsZ family, GTPase domain FY144_15050 PF00072 Response regulator receiver domain FY144_15070 PF00005 ABC transporter FY144_15075 PF13533 Biotin-lipoyl like FY144_15080 PF02056 Family 4 glycosyl hydrolase FY144_15080 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY144_15085 PF00005 ABC transporter FY144_15085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_15090 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15090 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_15095 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_15105 PF02056 Family 4 glycosyl hydrolase FY144_15105 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY144_15130 PF00480 ROK family FY144_15135 PF13416 Bacterial extracellular solute-binding protein FY144_15140 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15145 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15150 PF14698 Argininosuccinate lyase C-terminal FY144_15150 PF00206 Lyase FY144_15155 PF00005 ABC transporter FY144_15155 PF08402 TOBE domain FY144_15160 PF00294 pfkB family carbohydrate kinase FY144_15165 PF00884 Sulfatase FY144_15165 PF12411 Choline sulfatase enzyme C terminal FY144_15170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY144_15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_15175 PF03466 LysR substrate binding domain FY144_15180 PF00005 ABC transporter FY144_15185 PF01032 FecCD transport family FY144_15190 PF01032 FecCD transport family FY144_15200 PF00593 TonB dependent receptor FY144_15200 PF07715 TonB-dependent Receptor Plug Domain FY144_15205 PF12833 Helix-turn-helix domain FY144_15210 PF00141 Peroxidase FY144_15215 PF03466 LysR substrate binding domain FY144_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_15225 PF00672 HAMP domain FY144_15225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_15225 PF00512 His Kinase A (phospho-acceptor) domain FY144_15230 PF00072 Response regulator receiver domain FY144_15230 PF00486 Transcriptional regulatory protein, C terminal FY144_15235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY144_15240 PF00873 AcrB/AcrD/AcrF family FY144_15250 PF01865 Protein of unknown function DUF47 FY144_15255 PF01384 Phosphate transporter family FY144_15260 PF02735 Ku70/Ku80 beta-barrel domain FY144_15265 PF13298 DNA polymerase Ligase (LigD) FY144_15265 PF01068 ATP dependent DNA ligase domain FY144_15265 PF04679 ATP dependent DNA ligase C terminal region FY144_15270 PF02735 Ku70/Ku80 beta-barrel domain FY144_15285 PF00990 Diguanylate cyclase, GGDEF domain FY144_15285 PF00563 EAL domain FY144_15285 PF03707 Bacterial signalling protein N terminal repeat FY144_15285 PF13188 PAS domain FY144_15295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_15300 PF03786 D-mannonate dehydratase (UxuA) FY144_15305 PF07729 FCD domain FY144_15305 PF00392 Bacterial regulatory proteins, gntR family FY144_15310 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15315 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15315 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_15320 PF00005 ABC transporter FY144_15320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_15325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_15325 PF00005 ABC transporter FY144_15335 PF00005 ABC transporter FY144_15335 PF03459 TOBE domain FY144_15335 PF17912 MalK OB fold domain FY144_15340 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15345 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15355 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_15355 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY144_15355 PF01571 Aminomethyltransferase folate-binding domain FY144_15355 PF17806 Sarcosine oxidase A3 domain FY144_15360 PF00356 Bacterial regulatory proteins, lacI family FY144_15370 PF13361 UvrD-like helicase C-terminal domain FY144_15370 PF00580 UvrD/REP helicase N-terminal domain FY144_15375 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY144_15380 PF16363 GDP-mannose 4,6 dehydratase FY144_15385 PF04321 RmlD substrate binding domain FY144_15390 PF00483 Nucleotidyl transferase FY144_15400 PF13276 HTH-like domain FY144_15400 PF13683 Integrase core domain FY144_15410 PF08241 Methyltransferase domain FY144_15415 PF14307 Glycosyltransferase WbsX FY144_15415 PF05045 Rhamnan synthesis protein F FY144_15430 PF13005 zinc-finger binding domain of transposase IS66 FY144_15430 PF13007 Transposase C of IS166 homeodomain FY144_15430 PF13817 IS66 C-terminal element FY144_15430 PF03050 Transposase IS66 family FY144_15435 PF05717 IS66 Orf2 like protein FY144_15450 PF08241 Methyltransferase domain FY144_15455 PF08241 Methyltransferase domain FY144_15470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY144_15470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY144_15470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY144_15475 PF13005 zinc-finger binding domain of transposase IS66 FY144_15475 PF03050 Transposase IS66 family FY144_15475 PF13817 IS66 C-terminal element FY144_15475 PF13007 Transposase C of IS166 homeodomain FY144_15480 PF05717 IS66 Orf2 like protein FY144_15495 PF00664 ABC transporter transmembrane region FY144_15495 PF00005 ABC transporter FY144_15525 PF03466 LysR substrate binding domain FY144_15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_15530 PF00248 Aldo/keto reductase family FY144_15535 PF01758 Sodium Bile acid symporter family FY144_15540 PF02534 Type IV secretory system Conjugative DNA transfer FY144_15555 PF01443 Viral (Superfamily 1) RNA helicase FY144_15555 PF03389 MobA/MobL family FY144_15555 PF17841 BID domain of Bartonella effector protein (Bep) FY144_15590 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY144_15590 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY144_15595 PF00037 4Fe-4S binding domain FY144_15595 PF11953 Domain of unknown function (DUF3470) FY144_15610 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15615 PF00005 ABC transporter FY144_15615 PF08402 TOBE domain FY144_15620 PF01547 Bacterial extracellular solute-binding protein FY144_15625 PF00480 ROK family FY144_15635 PF12852 Cupin FY144_15635 PF12833 Helix-turn-helix domain FY144_15640 PF00106 short chain dehydrogenase FY144_15645 PF03009 Glycerophosphoryl diester phosphodiesterase family FY144_15650 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY144_15650 PF00480 ROK family FY144_15660 PF04773 FecR protein FY144_15660 PF16220 Domain of unknown function (DUF4880) FY144_15665 PF00593 TonB dependent receptor FY144_15665 PF07715 TonB-dependent Receptor Plug Domain FY144_15670 PF07690 Major Facilitator Superfamily FY144_15690 PF07470 Glycosyl Hydrolase Family 88 FY144_15700 PF08402 TOBE domain FY144_15700 PF00005 ABC transporter FY144_15705 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15710 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15715 PF00356 Bacterial regulatory proteins, lacI family FY144_15725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_15725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_15735 PF13407 Periplasmic binding protein domain FY144_15740 PF13407 Periplasmic binding protein domain FY144_15745 PF00356 Bacterial regulatory proteins, lacI family FY144_15750 PF00108 Thiolase, N-terminal domain FY144_15750 PF02803 Thiolase, C-terminal domain FY144_15755 PF01144 Coenzyme A transferase FY144_15760 PF01144 Coenzyme A transferase FY144_15765 PF09339 IclR helix-turn-helix domain FY144_15765 PF01614 Bacterial transcriptional regulator FY144_15775 PF01494 FAD binding domain FY144_15780 PF03466 LysR substrate binding domain FY144_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_15785 PF00561 alpha/beta hydrolase fold FY144_15790 PF02627 Carboxymuconolactone decarboxylase family FY144_15795 PF00775 Dioxygenase FY144_15795 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY144_15800 PF00775 Dioxygenase FY144_15805 PF00206 Lyase FY144_15805 PF10397 Adenylosuccinate lyase C-terminus FY144_15810 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15815 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15820 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_15825 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_15830 PF00005 ABC transporter FY144_15835 PF08501 Shikimate dehydrogenase substrate binding domain FY144_15835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY144_15840 PF01220 Dehydroquinase class II FY144_15850 PF01261 Xylose isomerase-like TIM barrel FY144_15850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_15860 PF00005 ABC transporter FY144_15860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_15865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_15870 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15875 PF00528 Binding-protein-dependent transport system inner membrane component FY144_15875 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_15890 PF13458 Periplasmic binding protein FY144_15905 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY144_15905 PF00005 ABC transporter FY144_15910 PF00005 ABC transporter FY144_15920 PF00294 pfkB family carbohydrate kinase FY144_15925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY144_15925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY144_15925 PF00205 Thiamine pyrophosphate enzyme, central domain FY144_15930 PF01261 Xylose isomerase-like TIM barrel FY144_15935 PF04962 KduI/IolB family FY144_15940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_15940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_15945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_15945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_15950 PF00356 Bacterial regulatory proteins, lacI family FY144_15955 PF01047 MarR family FY144_15960 PF02633 Creatinine amidohydrolase FY144_15965 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY144_15965 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY144_15995 PF03824 High-affinity nickel-transport protein FY144_16015 PF01081 KDPG and KHG aldolase FY144_16020 PF01928 CYTH domain FY144_16030 PF17773 UPF0176 acylphosphatase like domain FY144_16030 PF00581 Rhodanese-like domain FY144_16035 PF00990 Diguanylate cyclase, GGDEF domain FY144_16035 PF00563 EAL domain FY144_16035 PF13188 PAS domain FY144_16035 PF03707 Bacterial signalling protein N terminal repeat FY144_16040 PF03180 NLPA lipoprotein FY144_16045 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16050 PF00005 ABC transporter FY144_16050 PF09383 NIL domain FY144_16055 PF00881 Nitroreductase family FY144_16060 PF00232 Glycosyl hydrolase family 1 FY144_16065 PF01261 Xylose isomerase-like TIM barrel FY144_16070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_16070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_16075 PF00356 Bacterial regulatory proteins, lacI family FY144_16075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY144_16085 PF07690 Major Facilitator Superfamily FY144_16090 PF13533 Biotin-lipoyl like FY144_16095 PF00440 Bacterial regulatory proteins, tetR family FY144_16100 PF03471 Transporter associated domain FY144_16100 PF03741 Integral membrane protein TerC family FY144_16105 PF02080 TrkA-C domain FY144_16105 PF03600 Citrate transporter FY144_16110 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY144_16115 PF00152 tRNA synthetases class II (D, K and N) FY144_16115 PF01336 OB-fold nucleic acid binding domain FY144_16120 PF01734 Patatin-like phospholipase FY144_16130 PF01297 Zinc-uptake complex component A periplasmic FY144_16135 PF00005 ABC transporter FY144_16140 PF00950 ABC 3 transport family FY144_16145 PF00950 ABC 3 transport family FY144_16160 PF09339 IclR helix-turn-helix domain FY144_16160 PF01614 Bacterial transcriptional regulator FY144_16165 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY144_16170 PF04198 Putative sugar-binding domain FY144_16170 PF13936 Helix-turn-helix domain FY144_16180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY144_16180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY144_16190 PF10576 Iron-sulfur binding domain of endonuclease III FY144_16190 PF00633 Helix-hairpin-helix motif FY144_16190 PF00730 HhH-GPD superfamily base excision DNA repair protein FY144_16205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_16205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_16210 PF13419 Haloacid dehalogenase-like hydrolase FY144_16215 PF08125 Mannitol dehydrogenase C-terminal domain FY144_16215 PF01232 Mannitol dehydrogenase Rossmann domain FY144_16225 PF08402 TOBE domain FY144_16225 PF00005 ABC transporter FY144_16230 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16235 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16245 PF04198 Putative sugar-binding domain FY144_16250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_16250 PF00005 ABC transporter FY144_16255 PF01546 Peptidase family M20/M25/M40 FY144_16255 PF07687 Peptidase dimerisation domain FY144_16260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_16265 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16270 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_16270 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16280 PF01965 DJ-1/PfpI family FY144_16285 PF01425 Amidase FY144_16290 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_16290 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16295 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_16305 PF03466 LysR substrate binding domain FY144_16310 PF00005 ABC transporter FY144_16310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_16315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_16315 PF00005 ABC transporter FY144_16320 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16320 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_16325 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_16335 PF01244 Membrane dipeptidase (Peptidase family M19) FY144_16345 PF01546 Peptidase family M20/M25/M40 FY144_16345 PF07687 Peptidase dimerisation domain FY144_16350 PF07690 Major Facilitator Superfamily FY144_16355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_16355 PF03466 LysR substrate binding domain FY144_16360 PF13382 Adenine deaminase C-terminal domain FY144_16360 PF01979 Amidohydrolase family FY144_16370 PF00005 ABC transporter FY144_16370 PF08402 TOBE domain FY144_16380 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16390 PF00356 Bacterial regulatory proteins, lacI family FY144_16395 PF03466 LysR substrate binding domain FY144_16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_16400 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_16400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_16400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY144_16405 PF07715 TonB-dependent Receptor Plug Domain FY144_16415 PF00296 Luciferase-like monooxygenase FY144_16420 PF00005 ABC transporter FY144_16425 PF01032 FecCD transport family FY144_16430 PF01032 FecCD transport family FY144_16440 PF08021 Siderophore-interacting FAD-binding domain FY144_16440 PF04954 Siderophore-interacting protein FY144_16450 PF00501 AMP-binding enzyme FY144_16450 PF13193 AMP-binding enzyme C-terminal domain FY144_16450 PF00668 Condensation domain FY144_16450 PF00550 Phosphopantetheine attachment site FY144_16450 PF00975 Thioesterase domain FY144_16455 PF00668 Condensation domain FY144_16455 PF00550 Phosphopantetheine attachment site FY144_16455 PF00501 AMP-binding enzyme FY144_16455 PF00975 Thioesterase domain FY144_16460 PF13193 AMP-binding enzyme C-terminal domain FY144_16460 PF00668 Condensation domain FY144_16460 PF00550 Phosphopantetheine attachment site FY144_16460 PF00501 AMP-binding enzyme FY144_16465 PF00425 chorismate binding enzyme FY144_16470 PF00501 AMP-binding enzyme FY144_16470 PF13193 AMP-binding enzyme C-terminal domain FY144_16475 PF00857 Isochorismatase family FY144_16475 PF00550 Phosphopantetheine attachment site FY144_16485 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY144_16485 PF01648 4'-phosphopantetheinyl transferase superfamily FY144_16495 PF03264 NapC/NirT cytochrome c family, N-terminal region FY144_16500 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY144_16505 PF01568 Molydopterin dinucleotide binding domain FY144_16505 PF00384 Molybdopterin oxidoreductase FY144_16505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY144_16520 PF06796 Periplasmic nitrate reductase protein NapE FY144_16530 PF00005 ABC transporter FY144_16555 PF01136 Peptidase family U32 FY144_16565 PF04343 Protein of unknown function, DUF488 FY144_16570 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY144_16575 PF02441 Flavoprotein FY144_16585 PF00510 Cytochrome c oxidase subunit III FY144_16595 PF00034 Cytochrome c FY144_16600 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY144_16605 PF07728 AAA domain (dynein-related subfamily) FY144_16605 PF08406 CbbQ/NirQ/NorQ C-terminal FY144_16610 PF00092 von Willebrand factor type A domain FY144_16630 PF07732 Multicopper oxidase FY144_16630 PF00394 Multicopper oxidase FY144_16645 PF00034 Cytochrome c FY144_16665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_16665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_16675 PF00356 Bacterial regulatory proteins, lacI family FY144_16680 PF02653 Branched-chain amino acid transport system / permease component FY144_16685 PF02653 Branched-chain amino acid transport system / permease component FY144_16690 PF00005 ABC transporter FY144_16695 PF13407 Periplasmic binding protein domain FY144_16700 PF01548 Transposase FY144_16700 PF02371 Transposase IS116/IS110/IS902 family FY144_16710 PF03466 LysR substrate binding domain FY144_16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_16725 PF00356 Bacterial regulatory proteins, lacI family FY144_16730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_16730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_16735 PF01261 Xylose isomerase-like TIM barrel FY144_16740 PF13416 Bacterial extracellular solute-binding protein FY144_16745 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16750 PF00528 Binding-protein-dependent transport system inner membrane component FY144_16755 PF03459 TOBE domain FY144_16755 PF17912 MalK OB fold domain FY144_16755 PF00005 ABC transporter FY144_16770 PF03471 Transporter associated domain FY144_16770 PF03741 Integral membrane protein TerC family FY144_16775 PF00356 Bacterial regulatory proteins, lacI family FY144_16790 PF00459 Inositol monophosphatase family FY144_16795 PF03707 Bacterial signalling protein N terminal repeat FY144_16795 PF13188 PAS domain FY144_16795 PF00563 EAL domain FY144_16795 PF00990 Diguanylate cyclase, GGDEF domain FY144_16815 PF04717 Type VI secretion system, phage-baseplate injector FY144_16835 PF00004 ATPase family associated with various cellular activities (AAA) FY144_16835 PF07724 AAA domain (Cdc48 subfamily) FY144_16835 PF17871 AAA lid domain FY144_16835 PF10431 C-terminal, D2-small domain, of ClpB protein FY144_16845 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY144_16850 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY144_16870 PF05947 Type VI secretion system, TssF FY144_16885 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY144_16890 PF00691 OmpA family FY144_16895 PF06744 Type VI secretion protein IcmF C-terminal FY144_16895 PF14331 ImcF-related N-terminal domain FY144_16895 PF06761 Intracellular multiplication and human macrophage-killing FY144_16910 PF02563 Polysaccharide biosynthesis/export protein FY144_16920 PF00083 Sugar (and other) transporter FY144_16920 PF08946 Osmosensory transporter coiled coil FY144_16930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_16930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_16935 PF00106 short chain dehydrogenase FY144_16940 PF02653 Branched-chain amino acid transport system / permease component FY144_16945 PF00005 ABC transporter FY144_16950 PF13407 Periplasmic binding protein domain FY144_16955 PF12833 Helix-turn-helix domain FY144_16960 PF08240 Alcohol dehydrogenase GroES-like domain FY144_16960 PF00107 Zinc-binding dehydrogenase FY144_16975 PF00005 ABC transporter FY144_16985 PF00245 Alkaline phosphatase FY144_16990 PF00440 Bacterial regulatory proteins, tetR family FY144_17005 PF00551 Formyl transferase FY144_17010 PF00464 Serine hydroxymethyltransferase FY144_17020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_17020 PF17806 Sarcosine oxidase A3 domain FY144_17020 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY144_17020 PF01571 Aminomethyltransferase folate-binding domain FY144_17030 PF01266 FAD dependent oxidoreductase FY144_17045 PF00510 Cytochrome c oxidase subunit III FY144_17050 PF00510 Cytochrome c oxidase subunit III FY144_17055 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY144_17060 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY144_17065 PF00034 Cytochrome c FY144_17075 PF00890 FAD binding domain FY144_17075 PF02910 Fumarate reductase flavoprotein C-term FY144_17080 PF00732 GMC oxidoreductase FY144_17080 PF05199 GMC oxidoreductase FY144_17085 PF05199 GMC oxidoreductase FY144_17085 PF00732 GMC oxidoreductase FY144_17090 PF03459 TOBE domain FY144_17090 PF00005 ABC transporter FY144_17090 PF17912 MalK OB fold domain FY144_17095 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17100 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17105 PF01547 Bacterial extracellular solute-binding protein FY144_17110 PF00171 Aldehyde dehydrogenase family FY144_17115 PF00378 Enoyl-CoA hydratase/isomerase FY144_17120 PF01144 Coenzyme A transferase FY144_17125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_17125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_17130 PF00356 Bacterial regulatory proteins, lacI family FY144_17135 PF03928 Haem-degrading FY144_17140 PF07715 TonB-dependent Receptor Plug Domain FY144_17145 PF01497 Periplasmic binding protein FY144_17150 PF01032 FecCD transport family FY144_17155 PF01032 FecCD transport family FY144_17160 PF00005 ABC transporter FY144_17175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_17175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_17180 PF04324 BFD-like [2Fe-2S] binding domain FY144_17180 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_17185 PF01266 FAD dependent oxidoreductase FY144_17185 PF04324 BFD-like [2Fe-2S] binding domain FY144_17190 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17195 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17200 PF00005 ABC transporter FY144_17200 PF08402 TOBE domain FY144_17220 PF03466 LysR substrate binding domain FY144_17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_17225 PF00857 Isochorismatase family FY144_17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_17230 PF03466 LysR substrate binding domain FY144_17240 PF03466 LysR substrate binding domain FY144_17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_17245 PF05163 DinB family FY144_17250 PF00293 NUDIX domain FY144_17255 PF02567 Phenazine biosynthesis-like protein FY144_17270 PF00155 Aminotransferase class I and II FY144_17270 PF00392 Bacterial regulatory proteins, gntR family FY144_17280 PF03466 LysR substrate binding domain FY144_17280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_17295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_17300 PF00881 Nitroreductase family FY144_17315 PF01323 DSBA-like thioredoxin domain FY144_17320 PF02913 FAD linked oxidases, C-terminal domain FY144_17320 PF01565 FAD binding domain FY144_17325 PF01568 Molydopterin dinucleotide binding domain FY144_17325 PF00384 Molybdopterin oxidoreductase FY144_17330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_17335 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17340 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17340 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_17345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_17345 PF00005 ABC transporter FY144_17355 PF00296 Luciferase-like monooxygenase FY144_17360 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY144_17365 PF03358 NADPH-dependent FMN reductase FY144_17380 PF01053 Cys/Met metabolism PLP-dependent enzyme FY144_17385 PF01037 Lrp/AsnC ligand binding domain FY144_17390 PF02733 Dak1 domain FY144_17405 PF01555 DNA methylase FY144_17420 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY144_17460 PF01551 Peptidase family M23 FY144_17460 PF10145 Phage-related minor tail protein FY144_17460 PF01464 Transglycosylase SLT domain FY144_17465 PF10431 C-terminal, D2-small domain, of ClpB protein FY144_17465 PF02861 Clp amino terminal domain, pathogenicity island component FY144_17465 PF17871 AAA lid domain FY144_17465 PF07724 AAA domain (Cdc48 subfamily) FY144_17465 PF00004 ATPase family associated with various cellular activities (AAA) FY144_17475 PF05175 Methyltransferase small domain FY144_17475 PF17827 PrmC N-terminal domain FY144_17480 PF00472 RF-1 domain FY144_17480 PF03462 PCRF domain FY144_17485 PF01590 GAF domain FY144_17485 PF02896 PEP-utilising enzyme, TIM barrel domain FY144_17485 PF00391 PEP-utilising enzyme, mobile domain FY144_17485 PF05524 PEP-utilising enzyme, N-terminal FY144_17490 PF00696 Amino acid kinase family FY144_17490 PF13840 ACT domain FY144_17490 PF01842 ACT domain FY144_17495 PF00271 Helicase conserved C-terminal domain FY144_17495 PF00270 DEAD/DEAH box helicase FY144_17500 PF16653 Saccharopine dehydrogenase C-terminal domain FY144_17500 PF03435 Saccharopine dehydrogenase NADP binding domain FY144_17505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY144_17520 PF16363 GDP-mannose 4,6 dehydratase FY144_17530 PF07536 HWE histidine kinase FY144_17530 PF13581 Histidine kinase-like ATPase domain FY144_17530 PF13426 PAS domain FY144_17535 PF07536 HWE histidine kinase FY144_17535 PF08447 PAS fold FY144_17535 PF13426 PAS domain FY144_17540 PF00072 Response regulator receiver domain FY144_17550 PF08281 Sigma-70, region 4 FY144_17550 PF04542 Sigma-70 region 2 FY144_17555 PF01037 Lrp/AsnC ligand binding domain FY144_17560 PF00171 Aldehyde dehydrogenase family FY144_17560 PF14850 DNA-binding domain of Proline dehydrogenase FY144_17560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY144_17560 PF01619 Proline dehydrogenase FY144_17565 PF00005 ABC transporter FY144_17570 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17575 PF09084 NMT1/THI5 like FY144_17580 PF00171 Aldehyde dehydrogenase family FY144_17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_17585 PF03466 LysR substrate binding domain FY144_17590 PF13409 Glutathione S-transferase, N-terminal domain FY144_17605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY144_17605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY144_17605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY144_17610 PF16363 GDP-mannose 4,6 dehydratase FY144_17615 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY144_17615 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY144_17635 PF01965 DJ-1/PfpI family FY144_17655 PF03275 UDP-galactopyranose mutase FY144_17665 PF05974 Domain of unknown function (DUF892) FY144_17670 PF01011 PQQ enzyme repeat FY144_17690 PF13193 AMP-binding enzyme C-terminal domain FY144_17690 PF00501 AMP-binding enzyme FY144_17695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY144_17695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY144_17700 PF05199 GMC oxidoreductase FY144_17700 PF00732 GMC oxidoreductase FY144_17705 PF11862 Domain of unknown function (DUF3382) FY144_17705 PF02653 Branched-chain amino acid transport system / permease component FY144_17710 PF02653 Branched-chain amino acid transport system / permease component FY144_17715 PF00005 ABC transporter FY144_17720 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY144_17720 PF00005 ABC transporter FY144_17735 PF00296 Luciferase-like monooxygenase FY144_17740 PF13378 Enolase C-terminal domain-like FY144_17740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_17745 PF07729 FCD domain FY144_17745 PF00392 Bacterial regulatory proteins, gntR family FY144_17750 PF01232 Mannitol dehydrogenase Rossmann domain FY144_17750 PF08125 Mannitol dehydrogenase C-terminal domain FY144_17755 PF00005 ABC transporter FY144_17755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_17760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_17760 PF00005 ABC transporter FY144_17765 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_17765 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17770 PF00528 Binding-protein-dependent transport system inner membrane component FY144_17775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_17780 PF01321 Creatinase/Prolidase N-terminal domain FY144_17780 PF00557 Metallopeptidase family M24 FY144_17785 PF00106 short chain dehydrogenase FY144_17815 PF00575 S1 RNA binding domain FY144_17820 PF02224 Cytidylate kinase FY144_17850 PF02445 Quinolinate synthetase A protein FY144_17855 PF00890 FAD binding domain FY144_17855 PF02910 Fumarate reductase flavoprotein C-term FY144_17860 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY144_17860 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY144_17880 PF08173 Membrane bound YbgT-like protein FY144_17885 PF02322 Cytochrome bd terminal oxidase subunit II FY144_17890 PF01654 Cytochrome bd terminal oxidase subunit I FY144_17895 PF00664 ABC transporter transmembrane region FY144_17895 PF00005 ABC transporter FY144_17900 PF00664 ABC transporter transmembrane region FY144_17900 PF00005 ABC transporter FY144_17910 PF08240 Alcohol dehydrogenase GroES-like domain FY144_17910 PF00107 Zinc-binding dehydrogenase FY144_17920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY144_17920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY144_17930 PF01037 Lrp/AsnC ligand binding domain FY144_17935 PF01177 Asp/Glu/Hydantoin racemase FY144_17950 PF00343 Carbohydrate phosphorylase FY144_17955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY144_17955 PF00128 Alpha amylase, catalytic domain FY144_17955 PF02806 Alpha amylase, C-terminal all-beta domain FY144_17960 PF00483 Nucleotidyl transferase FY144_17965 PF00534 Glycosyl transferases group 1 FY144_17965 PF08323 Starch synthase catalytic domain FY144_17970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY144_17970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY144_17970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY144_17970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY144_17975 PF18390 Glycogen debranching enzyme C-terminal domain FY144_17975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY144_17975 PF00128 Alpha amylase, catalytic domain FY144_17980 PF01575 MaoC like domain FY144_17995 PF01571 Aminomethyltransferase folate-binding domain FY144_17995 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY144_17995 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_17995 PF17806 Sarcosine oxidase A3 domain FY144_18010 PF01266 FAD dependent oxidoreductase FY144_18015 PF01165 Ribosomal protein S21 FY144_18030 PF11089 Exopolysaccharide production repressor FY144_18035 PF00535 Glycosyl transferase family 2 FY144_18040 PF04230 Polysaccharide pyruvyl transferase FY144_18045 PF00535 Glycosyl transferase family 2 FY144_18050 PF01943 Polysaccharide biosynthesis protein FY144_18055 PF01757 Acyltransferase family FY144_18060 PF00722 Glycosyl hydrolases family 16 FY144_18070 PF00535 Glycosyl transferase family 2 FY144_18075 PF00535 Glycosyl transferase family 2 FY144_18080 PF00535 Glycosyl transferase family 2 FY144_18085 PF00483 Nucleotidyl transferase FY144_18090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY144_18090 PF13807 G-rich domain on putative tyrosine kinase FY144_18090 PF02706 Chain length determinant protein FY144_18095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_18115 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18120 PF00005 ABC transporter FY144_18120 PF00571 CBS domain FY144_18125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY144_18125 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_18130 PF01205 Uncharacterized protein family UPF0029 FY144_18135 PF00849 RNA pseudouridylate synthase FY144_18140 PF04445 Putative SAM-dependent methyltransferase FY144_18150 PF07995 Glucose / Sorbosone dehydrogenase FY144_18160 PF00196 Bacterial regulatory proteins, luxR family FY144_18160 PF00072 Response regulator receiver domain FY144_18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_18165 PF07730 Histidine kinase FY144_18170 PF13407 Periplasmic binding protein domain FY144_18175 PF00005 ABC transporter FY144_18180 PF02653 Branched-chain amino acid transport system / permease component FY144_18190 PF08450 SMP-30/Gluconolactonase/LRE-like region FY144_18195 PF02631 RecX family FY144_18200 PF00034 Cytochrome c FY144_18210 PF00005 ABC transporter FY144_18215 PF01032 FecCD transport family FY144_18225 PF00593 TonB dependent receptor FY144_18225 PF07715 TonB-dependent Receptor Plug Domain FY144_18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_18230 PF03466 LysR substrate binding domain FY144_18240 PF08019 Phosphoethanolamine transferase EptA/EptB FY144_18240 PF00884 Sulfatase FY144_18245 PF00072 Response regulator receiver domain FY144_18245 PF00486 Transcriptional regulatory protein, C terminal FY144_18250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_18250 PF00512 His Kinase A (phospho-acceptor) domain FY144_18255 PF00083 Sugar (and other) transporter FY144_18260 PF07756 Protein of unknown function (DUF1612) FY144_18260 PF11972 HTH DNA binding domain FY144_18270 PF00672 HAMP domain FY144_18270 PF00211 Adenylate and Guanylate cyclase catalytic domain FY144_18280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_18280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_18285 PF00892 EamA-like transporter family FY144_18290 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY144_18295 PF00491 Arginase family FY144_18310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY144_18310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY144_18315 PF00202 Aminotransferase class-III FY144_18325 PF00155 Aminotransferase class I and II FY144_18330 PF04055 Radical SAM superfamily FY144_18330 PF06968 Biotin and Thiamin Synthesis associated domain FY144_18335 PF13673 Acetyltransferase (GNAT) domain FY144_18380 PF01569 PAP2 superfamily FY144_18385 PF00072 Response regulator receiver domain FY144_18385 PF00486 Transcriptional regulatory protein, C terminal FY144_18400 PF07690 Major Facilitator Superfamily FY144_18405 PF03466 LysR substrate binding domain FY144_18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_18425 PF07969 Amidohydrolase family FY144_18440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_18445 PF03466 LysR substrate binding domain FY144_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_18455 PF00672 HAMP domain FY144_18455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_18470 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18475 PF00005 ABC transporter FY144_18485 PF04303 PrpF protein FY144_18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_18490 PF03466 LysR substrate binding domain FY144_18495 PF01047 MarR family FY144_18525 PF00440 Bacterial regulatory proteins, tetR family FY144_18530 PF02311 AraC-like ligand binding domain FY144_18530 PF12833 Helix-turn-helix domain FY144_18550 PF13533 Biotin-lipoyl like FY144_18560 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18565 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_18575 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18580 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_18580 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18585 PF00005 ABC transporter FY144_18585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_18625 PF01979 Amidohydrolase family FY144_18630 PF01979 Amidohydrolase family FY144_18635 PF00221 Aromatic amino acid lyase FY144_18645 PF01175 Urocanase Rossmann-like domain FY144_18645 PF17392 Urocanase C-terminal domain FY144_18645 PF17391 Urocanase N-terminal domain FY144_18650 PF05962 HutD FY144_18655 PF07364 Metallopeptidase family M81 FY144_18655 PF07171 MlrC C-terminus FY144_18660 PF01168 Alanine racemase, N-terminal domain FY144_18660 PF14031 Putative serine dehydratase domain FY144_18665 PF01042 Endoribonuclease L-PSP FY144_18675 PF13614 AAA domain FY144_18680 PF02195 ParB-like nuclease domain FY144_18680 PF07506 RepB plasmid partitioning protein FY144_18685 PF11800 Replication protein C C-terminal region FY144_18685 PF03428 Replication protein C N-terminal domain FY144_18700 PF06772 Bacterial low temperature requirement A protein (LtrA) FY144_18705 PF02885 Glycosyl transferase family, helical bundle domain FY144_18705 PF00591 Glycosyl transferase family, a/b domain FY144_18710 PF07715 TonB-dependent Receptor Plug Domain FY144_18710 PF00593 TonB dependent receptor FY144_18715 PF00376 MerR family regulatory protein FY144_18715 PF09278 MerR, DNA binding FY144_18720 PF02806 Alpha amylase, C-terminal all-beta domain FY144_18720 PF00128 Alpha amylase, catalytic domain FY144_18725 PF00364 Biotin-requiring enzyme FY144_18725 PF00289 Biotin carboxylase, N-terminal domain FY144_18725 PF02785 Biotin carboxylase C-terminal domain FY144_18725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY144_18730 PF02682 Carboxyltransferase domain, subdomain C and D FY144_18735 PF07286 Protein of unknown function (DUF1445) FY144_18740 PF03746 LamB/YcsF family FY144_18745 PF01566 Natural resistance-associated macrophage protein FY144_18750 PF07729 FCD domain FY144_18750 PF00392 Bacterial regulatory proteins, gntR family FY144_18755 PF03861 ANTAR domain FY144_18755 PF08376 Nitrate and nitrite sensing FY144_18770 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18775 PF00005 ABC transporter FY144_18780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY144_18780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY144_18780 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_18780 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY144_18780 PF04324 BFD-like [2Fe-2S] binding domain FY144_18790 PF04324 BFD-like [2Fe-2S] binding domain FY144_18790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY144_18790 PF00384 Molybdopterin oxidoreductase FY144_18790 PF01568 Molydopterin dinucleotide binding domain FY144_18795 PF10414 Sirohaem synthase dimerisation region FY144_18795 PF14824 Sirohaem biosynthesis protein central FY144_18795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY144_18800 PF08220 DeoR-like helix-turn-helix domain FY144_18800 PF00455 DeoR C terminal sensor domain FY144_18805 PF01266 FAD dependent oxidoreductase FY144_18805 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY144_18810 PF17912 MalK OB fold domain FY144_18810 PF00005 ABC transporter FY144_18815 PF17912 MalK OB fold domain FY144_18815 PF00005 ABC transporter FY144_18820 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18825 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_18840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_18845 PF03466 LysR substrate binding domain FY144_18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_18850 PF13593 SBF-like CPA transporter family (DUF4137) FY144_18855 PF00011 Hsp20/alpha crystallin family FY144_18870 PF00459 Inositol monophosphatase family FY144_18880 PF00072 Response regulator receiver domain FY144_18890 PF13407 Periplasmic binding protein domain FY144_18895 PF00005 ABC transporter FY144_18900 PF02653 Branched-chain amino acid transport system / permease component FY144_18910 PF00248 Aldo/keto reductase family FY144_18915 PF01266 FAD dependent oxidoreductase FY144_18915 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY144_18920 PF01791 DeoC/LacD family aldolase FY144_18925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_18925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_18930 PF00672 HAMP domain FY144_18930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_18935 PF03466 LysR substrate binding domain FY144_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_18940 PF00300 Histidine phosphatase superfamily (branch 1) FY144_18940 PF00106 short chain dehydrogenase FY144_18945 PF00155 Aminotransferase class I and II FY144_18950 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18955 PF00528 Binding-protein-dependent transport system inner membrane component FY144_18965 PF00005 ABC transporter FY144_18965 PF08402 TOBE domain FY144_18970 PF03746 LamB/YcsF family FY144_18975 PF02626 Carboxyltransferase domain, subdomain A and B FY144_18980 PF02682 Carboxyltransferase domain, subdomain C and D FY144_18990 PF02785 Biotin carboxylase C-terminal domain FY144_18990 PF00289 Biotin carboxylase, N-terminal domain FY144_18990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY144_18995 PF00364 Biotin-requiring enzyme FY144_19000 PF00892 EamA-like transporter family FY144_19005 PF00892 EamA-like transporter family FY144_19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_19010 PF03466 LysR substrate binding domain FY144_19015 PF03401 Tripartite tricarboxylate transporter family receptor FY144_19020 PF03737 Aldolase/RraA FY144_19030 PF01970 Tripartite tricarboxylate transporter TctA family FY144_19035 PF01370 NAD dependent epimerase/dehydratase family FY144_19045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_19045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_19050 PF00106 short chain dehydrogenase FY144_19055 PF00528 Binding-protein-dependent transport system inner membrane component FY144_19060 PF00528 Binding-protein-dependent transport system inner membrane component FY144_19065 PF00005 ABC transporter FY144_19070 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_19075 PF03737 Aldolase/RraA FY144_19080 PF00107 Zinc-binding dehydrogenase FY144_19080 PF08240 Alcohol dehydrogenase GroES-like domain FY144_19095 PF01070 FMN-dependent dehydrogenase FY144_19100 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY144_19100 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_19100 PF14602 Hexapeptide repeat of succinyl-transferase FY144_19110 PF01547 Bacterial extracellular solute-binding protein FY144_19120 PF03459 TOBE domain FY144_19120 PF00005 ABC transporter FY144_19120 PF17912 MalK OB fold domain FY144_19125 PF07470 Glycosyl Hydrolase Family 88 FY144_19130 PF00528 Binding-protein-dependent transport system inner membrane component FY144_19135 PF00528 Binding-protein-dependent transport system inner membrane component FY144_19150 PF07729 FCD domain FY144_19150 PF00392 Bacterial regulatory proteins, gntR family FY144_19155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_19155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_19160 PF00005 ABC transporter FY144_19160 PF12848 ABC transporter FY144_19170 PF01841 Transglutaminase-like superfamily FY144_19170 PF08379 Bacterial transglutaminase-like N-terminal region FY144_19175 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY144_19175 PF14403 Circularly permuted ATP-grasp type 2 FY144_19195 PF03061 Thioesterase superfamily FY144_19210 PF07729 FCD domain FY144_19210 PF00392 Bacterial regulatory proteins, gntR family FY144_19215 PF00465 Iron-containing alcohol dehydrogenase FY144_19220 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY144_19230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_19235 PF00528 Binding-protein-dependent transport system inner membrane component FY144_19240 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_19240 PF00528 Binding-protein-dependent transport system inner membrane component FY144_19245 PF00005 ABC transporter FY144_19245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_19250 PF00701 Dihydrodipicolinate synthetase family FY144_19270 PF00221 Aromatic amino acid lyase FY144_19275 PF00005 ABC transporter FY144_19275 PF00571 CBS domain FY144_19280 PF00528 Binding-protein-dependent transport system inner membrane component FY144_19295 PF00392 Bacterial regulatory proteins, gntR family FY144_19295 PF07702 UTRA domain FY144_19300 PF00440 Bacterial regulatory proteins, tetR family FY144_19300 PF13977 BetI-type transcriptional repressor, C-terminal FY144_19305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY144_19305 PF00529 HlyD membrane-fusion protein of T1SS FY144_19315 PF00873 AcrB/AcrD/AcrF family FY144_19320 PF00392 Bacterial regulatory proteins, gntR family FY144_19320 PF07729 FCD domain FY144_19325 PF00206 Lyase FY144_19325 PF10415 Fumarase C C-terminus FY144_19330 PF00324 Amino acid permease FY144_19335 PF00710 Asparaginase, N-terminal FY144_19335 PF17763 Glutaminase/Asparaginase C-terminal domain FY144_19345 PF03814 Potassium-transporting ATPase A subunit FY144_19355 PF02669 K+-transporting ATPase, c chain FY144_19360 PF02702 Osmosensitive K+ channel His kinase sensor domain FY144_19360 PF00512 His Kinase A (phospho-acceptor) domain FY144_19360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_19360 PF13493 Domain of unknown function (DUF4118) FY144_19360 PF13492 GAF domain FY144_19365 PF00486 Transcriptional regulatory protein, C terminal FY144_19365 PF00072 Response regulator receiver domain FY144_19370 PF01212 Beta-eliminating lyase FY144_19375 PF01645 Conserved region in glutamate synthase FY144_19375 PF04898 Glutamate synthase central domain FY144_19375 PF00310 Glutamine amidotransferases class-II FY144_19375 PF01493 GXGXG motif FY144_19385 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_19385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY144_19390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_19390 PF00672 HAMP domain FY144_19390 PF00512 His Kinase A (phospho-acceptor) domain FY144_19405 PF13406 Transglycosylase SLT domain FY144_19410 PF00483 Nucleotidyl transferase FY144_19430 PF00571 CBS domain FY144_19430 PF01380 SIS domain FY144_19440 PF01145 SPFH domain / Band 7 family FY144_19440 PF16200 C-terminal region of band_7 FY144_19445 PF00762 Ferrochelatase FY144_19450 PF00149 Calcineurin-like phosphoesterase FY144_19450 PF02872 5'-nucleotidase, C-terminal domain FY144_19460 PF16653 Saccharopine dehydrogenase C-terminal domain FY144_19460 PF03435 Saccharopine dehydrogenase NADP binding domain FY144_19465 PF00990 Diguanylate cyclase, GGDEF domain FY144_19470 PF01063 Amino-transferase class IV FY144_19475 PF08439 Oligopeptidase F FY144_19475 PF01432 Peptidase family M3 FY144_19480 PF00158 Sigma-54 interaction domain FY144_19480 PF02954 Bacterial regulatory protein, Fis family FY144_19480 PF00072 Response regulator receiver domain FY144_19485 PF05951 Bacterial protein of unknown function (DUF882) FY144_19490 PF02887 Pyruvate kinase, alpha/beta domain FY144_19490 PF00224 Pyruvate kinase, barrel domain FY144_19510 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY144_19520 PF00444 Ribosomal protein L36 FY144_19525 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY144_19525 PF02222 ATP-grasp domain FY144_19530 PF00731 AIR carboxylase FY144_19560 PF00459 Inositol monophosphatase family FY144_19570 PF01389 OmpA-like transmembrane domain FY144_19570 PF00691 OmpA family FY144_19575 PF00890 FAD binding domain FY144_19580 PF00664 ABC transporter transmembrane region FY144_19580 PF00005 ABC transporter FY144_19585 PF01197 Ribosomal protein L31 FY144_19605 PF00274 Fructose-bisphosphate aldolase class-I FY144_19610 PF00162 Phosphoglycerate kinase FY144_19615 PF03471 Transporter associated domain FY144_19615 PF00999 Sodium/hydrogen exchanger family FY144_19625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY144_19625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY144_19630 PF00456 Transketolase, thiamine diphosphate binding domain FY144_19630 PF02780 Transketolase, C-terminal domain FY144_19630 PF02779 Transketolase, pyrimidine binding domain FY144_19650 PF00571 CBS domain FY144_19650 PF03471 Transporter associated domain FY144_19650 PF01595 Cyclin M transmembrane N-terminal domain FY144_19660 PF13277 YmdB-like protein FY144_19675 PF01709 Transcriptional regulator FY144_19680 PF00296 Luciferase-like monooxygenase FY144_19685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_19685 PF00672 HAMP domain FY144_19690 PF02075 Crossover junction endodeoxyribonuclease RuvC FY144_19695 PF01330 RuvA N terminal domain FY144_19695 PF07499 RuvA, C-terminal domain FY144_19700 PF17864 RuvB AAA lid domain FY144_19700 PF05491 RuvB C-terminal winged helix domain FY144_19700 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY144_19715 PF00293 NUDIX domain FY144_19720 PF00293 NUDIX domain FY144_19725 PF03061 Thioesterase superfamily FY144_19730 PF01618 MotA/TolQ/ExbB proton channel family FY144_19735 PF02472 Biopolymer transport protein ExbD/TolR FY144_19745 PF07676 WD40-like Beta Propeller Repeat FY144_19745 PF04052 TolB amino-terminal domain FY144_19750 PF00691 OmpA family FY144_19760 PF01171 PP-loop family FY144_19765 PF00004 ATPase family associated with various cellular activities (AAA) FY144_19765 PF17862 AAA+ lid domain FY144_19765 PF06480 FtsH Extracellular FY144_19765 PF01434 Peptidase family M41 FY144_19770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY144_19770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY144_19770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY144_19770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY144_19775 PF13505 Outer membrane protein beta-barrel domain FY144_19785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_19785 PF01842 ACT domain FY144_19785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_19825 PF00085 Thioredoxin FY144_19835 PF03966 Trm112p-like protein FY144_19840 PF01835 MG2 domain FY144_19840 PF17962 Bacterial macroglobulin domain 6 FY144_19840 PF07678 A-macroglobulin TED domain FY144_19840 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY144_19840 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY144_19840 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY144_19840 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY144_19840 PF07703 Alpha-2-macroglobulin bait region domain FY144_19840 PF00207 Alpha-2-macroglobulin family FY144_19845 PF06832 Penicillin-Binding Protein C-terminus Family FY144_19845 PF00912 Transglycosylase FY144_19845 PF00905 Penicillin binding protein transpeptidase domain FY144_19855 PF07687 Peptidase dimerisation domain FY144_19855 PF01546 Peptidase family M20/M25/M40 FY144_19860 PF00768 D-alanyl-D-alanine carboxypeptidase FY144_19860 PF07943 Penicillin-binding protein 5, C-terminal domain FY144_19865 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY144_19865 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY144_19870 PF00581 Rhodanese-like domain FY144_19870 PF01206 Sulfurtransferase TusA FY144_19875 PF03734 L,D-transpeptidase catalytic domain FY144_19880 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY144_19885 PF02899 Phage integrase, N-terminal SAM-like domain FY144_19885 PF00589 Phage integrase family FY144_19895 PF01202 Shikimate kinase FY144_19900 PF01761 3-dehydroquinate synthase FY144_19910 PF01722 BolA-like protein FY144_19915 PF00226 DnaJ domain FY144_19920 PF07728 AAA domain (dynein-related subfamily) FY144_19920 PF08406 CbbQ/NirQ/NorQ C-terminal FY144_19920 PF12556 Cobaltochelatase CobS subunit N terminal FY144_19925 PF06213 Cobalamin biosynthesis protein CobT FY144_19925 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY144_19940 PF02592 Putative vitamin uptake transporter FY144_19945 PF00830 Ribosomal L28 family FY144_19965 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY144_19965 PF00753 Metallo-beta-lactamase superfamily FY144_19970 PF01209 ubiE/COQ5 methyltransferase family FY144_19975 PF00155 Aminotransferase class I and II FY144_19980 PF02153 Prephenate dehydrogenase FY144_19990 PF04752 ChaC-like protein FY144_20010 PF00005 ABC transporter FY144_20020 PF00156 Phosphoribosyl transferase domain FY144_20025 PF00072 Response regulator receiver domain FY144_20035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY144_20035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY144_20045 PF00206 Lyase FY144_20045 PF14698 Argininosuccinate lyase C-terminal FY144_20050 PF08534 Redoxin FY144_20060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY144_20060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY144_20065 PF00766 Electron transfer flavoprotein FAD-binding domain FY144_20065 PF01012 Electron transfer flavoprotein domain FY144_20070 PF01012 Electron transfer flavoprotein domain FY144_20080 PF01923 Cobalamin adenosyltransferase FY144_20090 PF00106 short chain dehydrogenase FY144_20100 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY144_20105 PF02805 Metal binding domain of Ada FY144_20105 PF06029 AlkA N-terminal domain FY144_20105 PF00730 HhH-GPD superfamily base excision DNA repair protein FY144_20105 PF12833 Helix-turn-helix domain FY144_20110 PF06114 IrrE N-terminal-like domain FY144_20110 PF09856 Predicted transcriptional regulator (DUF2083) FY144_20110 PF01381 Helix-turn-helix FY144_20115 PF01039 Carboxyl transferase domain FY144_20120 PF02798 Glutathione S-transferase, N-terminal domain FY144_20135 PF00364 Biotin-requiring enzyme FY144_20135 PF00289 Biotin carboxylase, N-terminal domain FY144_20135 PF02785 Biotin carboxylase C-terminal domain FY144_20135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY144_20135 PF18140 Propionyl-coenzyme A carboxylase BT domain FY144_20140 PF02310 B12 binding domain FY144_20140 PF01642 Methylmalonyl-CoA mutase FY144_20150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY144_20150 PF01266 FAD dependent oxidoreductase FY144_20160 PF13407 Periplasmic binding protein domain FY144_20165 PF02653 Branched-chain amino acid transport system / permease component FY144_20170 PF00005 ABC transporter FY144_20175 PF01717 Cobalamin-independent synthase, Catalytic domain FY144_20175 PF08267 Cobalamin-independent synthase, N-terminal domain FY144_20185 PF01381 Helix-turn-helix FY144_20200 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY144_20225 PF01047 MarR family FY144_20225 PF00480 ROK family FY144_20235 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20240 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20245 PF17912 MalK OB fold domain FY144_20245 PF03459 TOBE domain FY144_20245 PF00005 ABC transporter FY144_20250 PF03009 Glycerophosphoryl diester phosphodiesterase family FY144_20260 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY144_20260 PF00722 Glycosyl hydrolases family 16 FY144_20265 PF01272 Transcription elongation factor, GreA/GreB, C-term FY144_20265 PF03449 Transcription elongation factor, N-terminal FY144_20280 PF13439 Glycosyltransferase Family 4 FY144_20280 PF00534 Glycosyl transferases group 1 FY144_20285 PF00534 Glycosyl transferases group 1 FY144_20285 PF13439 Glycosyltransferase Family 4 FY144_20305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY144_20305 PF13807 G-rich domain on putative tyrosine kinase FY144_20305 PF02706 Chain length determinant protein FY144_20315 PF01757 Acyltransferase family FY144_20330 PF01943 Polysaccharide biosynthesis protein FY144_20390 PF01757 Acyltransferase family FY144_20395 PF00892 EamA-like transporter family FY144_20400 PF01043 SecA preprotein cross-linking domain FY144_20400 PF02810 SEC-C motif FY144_20400 PF07516 SecA Wing and Scaffold domain FY144_20400 PF07517 SecA DEAD-like domain FY144_20410 PF01960 ArgJ family FY144_20415 PF13508 Acetyltransferase (GNAT) domain FY144_20415 PF00583 Acetyltransferase (GNAT) family FY144_20420 PF00293 NUDIX domain FY144_20435 PF08241 Methyltransferase domain FY144_20445 PF00462 Glutaredoxin FY144_20450 PF00795 Carbon-nitrogen hydrolase FY144_20460 PF08241 Methyltransferase domain FY144_20475 PF00378 Enoyl-CoA hydratase/isomerase FY144_20485 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20490 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20495 PF00005 ABC transporter FY144_20500 PF08713 DNA alkylation repair enzyme FY144_20505 PF00171 Aldehyde dehydrogenase family FY144_20515 PF00563 EAL domain FY144_20515 PF00990 Diguanylate cyclase, GGDEF domain FY144_20515 PF08447 PAS fold FY144_20515 PF08448 PAS fold FY144_20525 PF00561 alpha/beta hydrolase fold FY144_20535 PF05336 L-rhamnose mutarotase FY144_20540 PF02653 Branched-chain amino acid transport system / permease component FY144_20545 PF02653 Branched-chain amino acid transport system / permease component FY144_20550 PF00005 ABC transporter FY144_20555 PF13407 Periplasmic binding protein domain FY144_20560 PF08220 DeoR-like helix-turn-helix domain FY144_20560 PF00455 DeoR C terminal sensor domain FY144_20565 PF00596 Class II Aldolase and Adducin N-terminal domain FY144_20570 PF01261 Xylose isomerase-like TIM barrel FY144_20575 PF02548 Ketopantoate hydroxymethyltransferase FY144_20580 PF02569 Pantoate-beta-alanine ligase FY144_20590 PF00682 HMGL-like FY144_20595 PF00289 Biotin carboxylase, N-terminal domain FY144_20595 PF00364 Biotin-requiring enzyme FY144_20595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY144_20595 PF02785 Biotin carboxylase C-terminal domain FY144_20600 PF01039 Carboxyl transferase domain FY144_20605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY144_20605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_20605 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_20610 PF01037 Lrp/AsnC ligand binding domain FY144_20615 PF00108 Thiolase, N-terminal domain FY144_20615 PF02803 Thiolase, C-terminal domain FY144_20620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_20620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY144_20620 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_20625 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY144_20625 PF00676 Dehydrogenase E1 component FY144_20630 PF02780 Transketolase, C-terminal domain FY144_20630 PF02779 Transketolase, pyrimidine binding domain FY144_20635 PF02817 e3 binding domain FY144_20635 PF00364 Biotin-requiring enzyme FY144_20635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY144_20640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY144_20640 PF01676 Metalloenzyme superfamily FY144_20650 PF04143 Sulphur transport FY144_20660 PF04273 Putative phosphatase (DUF442) FY144_20660 PF00753 Metallo-beta-lactamase superfamily FY144_20670 PF00106 short chain dehydrogenase FY144_20675 PF00561 alpha/beta hydrolase fold FY144_20685 PF00392 Bacterial regulatory proteins, gntR family FY144_20685 PF07729 FCD domain FY144_20695 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20700 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_20700 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_20705 PF00005 ABC transporter FY144_20710 PF00005 ABC transporter FY144_20710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_20715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_20725 PF13378 Enolase C-terminal domain-like FY144_20725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_20730 PF00296 Luciferase-like monooxygenase FY144_20735 PF00296 Luciferase-like monooxygenase FY144_20745 PF05368 NmrA-like family FY144_20750 PF00296 Luciferase-like monooxygenase FY144_20755 PF07687 Peptidase dimerisation domain FY144_20755 PF01546 Peptidase family M20/M25/M40 FY144_20760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_20775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_20780 PF00296 Luciferase-like monooxygenase FY144_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_20785 PF03466 LysR substrate binding domain FY144_20795 PF00248 Aldo/keto reductase family FY144_20800 PF00005 ABC transporter FY144_20800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_20805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_20805 PF00005 ABC transporter FY144_20810 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20815 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_20830 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_20830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY144_20830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_20835 PF00296 Luciferase-like monooxygenase FY144_20845 PF00581 Rhodanese-like domain FY144_20860 PF00296 Luciferase-like monooxygenase FY144_20865 PF01613 Flavin reductase like domain FY144_20875 PF02082 Transcriptional regulator FY144_20880 PF00296 Luciferase-like monooxygenase FY144_20885 PF00296 Luciferase-like monooxygenase FY144_20890 PF07687 Peptidase dimerisation domain FY144_20890 PF01546 Peptidase family M20/M25/M40 FY144_20900 PF00005 ABC transporter FY144_20905 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_20915 PF03466 LysR substrate binding domain FY144_20925 PF04324 BFD-like [2Fe-2S] binding domain FY144_20925 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_20930 PF01266 FAD dependent oxidoreductase FY144_20935 PF01266 FAD dependent oxidoreductase FY144_20940 PF01037 Lrp/AsnC ligand binding domain FY144_20945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_20945 PF00005 ABC transporter FY144_20950 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_20950 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20955 PF00528 Binding-protein-dependent transport system inner membrane component FY144_20960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_20970 PF00202 Aminotransferase class-III FY144_20985 PF01266 FAD dependent oxidoreductase FY144_20990 PF00171 Aldehyde dehydrogenase family FY144_20995 PF00180 Isocitrate/isopropylmalate dehydrogenase FY144_21000 PF00171 Aldehyde dehydrogenase family FY144_21010 PF01968 Hydantoinase/oxoprolinase FY144_21010 PF05378 Hydantoinase/oxoprolinase N-terminal region FY144_21025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_21030 PF01546 Peptidase family M20/M25/M40 FY144_21030 PF07687 Peptidase dimerisation domain FY144_21045 PF01032 FecCD transport family FY144_21050 PF00005 ABC transporter FY144_21055 PF00127 Copper binding proteins, plastocyanin/azurin family FY144_21060 PF01209 ubiE/COQ5 methyltransferase family FY144_21075 PF01032 FecCD transport family FY144_21080 PF00005 ABC transporter FY144_21085 PF04542 Sigma-70 region 2 FY144_21085 PF08281 Sigma-70, region 4 FY144_21085 PF12680 SnoaL-like domain FY144_21105 PF00005 ABC transporter FY144_21105 PF00664 ABC transporter transmembrane region FY144_21110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY144_21110 PF00529 HlyD membrane-fusion protein of T1SS FY144_21120 PF00392 Bacterial regulatory proteins, gntR family FY144_21120 PF07729 FCD domain FY144_21125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_21125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_21130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_21130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_21135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_21135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_21145 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21150 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21155 PF00005 ABC transporter FY144_21155 PF03459 TOBE domain FY144_21155 PF17912 MalK OB fold domain FY144_21160 PF00920 Dehydratase family FY144_21165 PF01370 NAD dependent epimerase/dehydratase family FY144_21170 PF03737 Aldolase/RraA FY144_21175 PF00196 Bacterial regulatory proteins, luxR family FY144_21175 PF00072 Response regulator receiver domain FY144_21180 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21185 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21185 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_21190 PF00005 ABC transporter FY144_21190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_21205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_21220 PF01112 Asparaginase FY144_21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_21225 PF03466 LysR substrate binding domain FY144_21230 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21235 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21235 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_21240 PF00005 ABC transporter FY144_21240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_21250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_21255 PF01546 Peptidase family M20/M25/M40 FY144_21265 PF13407 Periplasmic binding protein domain FY144_21270 PF00005 ABC transporter FY144_21275 PF02653 Branched-chain amino acid transport system / permease component FY144_21280 PF07722 Peptidase C26 FY144_21285 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_21290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_21295 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY144_21310 PF01266 FAD dependent oxidoreductase FY144_21315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_21315 PF08447 PAS fold FY144_21315 PF13426 PAS domain FY144_21320 PF00296 Luciferase-like monooxygenase FY144_21325 PF03972 MmgE/PrpD family FY144_21330 PF00005 ABC transporter FY144_21335 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21340 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21345 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_21350 PF01515 Phosphate acetyl/butaryl transferase FY144_21350 PF03949 Malic enzyme, NAD binding domain FY144_21350 PF00390 Malic enzyme, N-terminal domain FY144_21355 PF03466 LysR substrate binding domain FY144_21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_21360 PF01011 PQQ enzyme repeat FY144_21365 PF00483 Nucleotidyl transferase FY144_21365 PF01050 Mannose-6-phosphate isomerase FY144_21375 PF01547 Bacterial extracellular solute-binding protein FY144_21380 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21385 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21390 PF17912 MalK OB fold domain FY144_21390 PF00005 ABC transporter FY144_21400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_21400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_21405 PF06508 Queuosine biosynthesis protein QueC FY144_21410 PF01242 6-pyruvoyl tetrahydropterin synthase FY144_21415 PF04055 Radical SAM superfamily FY144_21420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_21420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_21430 PF00005 ABC transporter FY144_21430 PF17912 MalK OB fold domain FY144_21430 PF03459 TOBE domain FY144_21435 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21440 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21445 PF01547 Bacterial extracellular solute-binding protein FY144_21450 PF00356 Bacterial regulatory proteins, lacI family FY144_21465 PF02245 Methylpurine-DNA glycosylase (MPG) FY144_21485 PF17969 L,D-transpeptidase C-terminal domain FY144_21485 PF03734 L,D-transpeptidase catalytic domain FY144_21490 PF00672 HAMP domain FY144_21490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_21495 PF00202 Aminotransferase class-III FY144_21505 PF02397 Bacterial sugar transferase FY144_21510 PF02563 Polysaccharide biosynthesis/export protein FY144_21525 PF00529 HlyD membrane-fusion protein of T1SS FY144_21530 PF00664 ABC transporter transmembrane region FY144_21530 PF00005 ABC transporter FY144_21545 PF00072 Response regulator receiver domain FY144_21545 PF00196 Bacterial regulatory proteins, luxR family FY144_21555 PF01370 NAD dependent epimerase/dehydratase family FY144_21560 PF16363 GDP-mannose 4,6 dehydratase FY144_21590 PF00535 Glycosyl transferase family 2 FY144_21590 PF07238 PilZ domain FY144_21590 PF03552 Cellulose synthase FY144_21600 PF01270 Glycosyl hydrolases family 8 FY144_21610 PF07687 Peptidase dimerisation domain FY144_21610 PF01546 Peptidase family M20/M25/M40 FY144_21625 PF00202 Aminotransferase class-III FY144_21630 PF00375 Sodium:dicarboxylate symporter family FY144_21635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_21635 PF00512 His Kinase A (phospho-acceptor) domain FY144_21640 PF00072 Response regulator receiver domain FY144_21640 PF00158 Sigma-54 interaction domain FY144_21640 PF02954 Bacterial regulatory protein, Fis family FY144_21655 PF01266 FAD dependent oxidoreductase FY144_21660 PF01168 Alanine racemase, N-terminal domain FY144_21660 PF00842 Alanine racemase, C-terminal domain FY144_21665 PF01037 Lrp/AsnC ligand binding domain FY144_21670 PF08543 Phosphomethylpyrimidine kinase FY144_21675 PF02581 Thiamine monophosphate synthase FY144_21680 PF02110 Hydroxyethylthiazole kinase family FY144_21685 PF09084 NMT1/THI5 like FY144_21690 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21700 PF01055 Glycosyl hydrolases family 31 FY144_21705 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21710 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21715 PF01547 Bacterial extracellular solute-binding protein FY144_21720 PF08402 TOBE domain FY144_21720 PF00005 ABC transporter FY144_21735 PF12792 CSS motif domain associated with EAL FY144_21735 PF00563 EAL domain FY144_21745 PF00392 Bacterial regulatory proteins, gntR family FY144_21745 PF07702 UTRA domain FY144_21750 PF00296 Luciferase-like monooxygenase FY144_21755 PF00248 Aldo/keto reductase family FY144_21760 PF01613 Flavin reductase like domain FY144_21780 PF00873 AcrB/AcrD/AcrF family FY144_21790 PF02563 Polysaccharide biosynthesis/export protein FY144_21795 PF00534 Glycosyl transferases group 1 FY144_21795 PF13439 Glycosyltransferase Family 4 FY144_21800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_21805 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21810 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21810 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_21815 PF01979 Amidohydrolase family FY144_21830 PF03841 L-seryl-tRNA selenium transferase FY144_21835 PF00005 ABC transporter FY144_21835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_21840 PF00043 Glutathione S-transferase, C-terminal domain FY144_21840 PF02798 Glutathione S-transferase, N-terminal domain FY144_21855 PF00296 Luciferase-like monooxygenase FY144_21860 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY144_21860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_21865 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_21875 PF00171 Aldehyde dehydrogenase family FY144_21885 PF03786 D-mannonate dehydratase (UxuA) FY144_21890 PF08240 Alcohol dehydrogenase GroES-like domain FY144_21890 PF00107 Zinc-binding dehydrogenase FY144_21895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_21905 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_21910 PF00392 Bacterial regulatory proteins, gntR family FY144_21910 PF07729 FCD domain FY144_21915 PF13419 Haloacid dehalogenase-like hydrolase FY144_21920 PF05209 Septum formation inhibitor MinC, N-terminal domain FY144_21920 PF03775 Septum formation inhibitor MinC, C-terminal domain FY144_21925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY144_21930 PF03776 Septum formation topological specificity factor MinE FY144_21945 PF00563 EAL domain FY144_21945 PF08448 PAS fold FY144_21945 PF08447 PAS fold FY144_21945 PF00990 Diguanylate cyclase, GGDEF domain FY144_21950 PF01425 Amidase FY144_21960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_21970 PF01547 Bacterial extracellular solute-binding protein FY144_21975 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21980 PF00528 Binding-protein-dependent transport system inner membrane component FY144_21985 PF00005 ABC transporter FY144_21985 PF17912 MalK OB fold domain FY144_21985 PF03459 TOBE domain FY144_21995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_21995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_22005 PF05161 MOFRL family FY144_22005 PF13660 Domain of unknown function (DUF4147) FY144_22025 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY144_22025 PF02811 PHP domain FY144_22025 PF01336 OB-fold nucleic acid binding domain FY144_22025 PF14579 Helix-hairpin-helix motif FY144_22025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY144_22030 PF13847 Methyltransferase domain FY144_22040 PF07690 Major Facilitator Superfamily FY144_22045 PF07729 FCD domain FY144_22045 PF00392 Bacterial regulatory proteins, gntR family FY144_22050 PF02653 Branched-chain amino acid transport system / permease component FY144_22055 PF02653 Branched-chain amino acid transport system / permease component FY144_22060 PF00005 ABC transporter FY144_22065 PF13407 Periplasmic binding protein domain FY144_22070 PF00920 Dehydratase family FY144_22080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY144_22085 PF12833 Helix-turn-helix domain FY144_22095 PF00266 Aminotransferase class-V FY144_22100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_22100 PF00005 ABC transporter FY144_22105 PF00005 ABC transporter FY144_22105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_22110 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22115 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_22125 PF01580 FtsK/SpoIIIE family FY144_22125 PF09397 Ftsk gamma domain FY144_22125 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY144_22125 PF17854 FtsK alpha domain FY144_22130 PF02615 Malate/L-lactate dehydrogenase FY144_22135 PF00563 EAL domain FY144_22135 PF00990 Diguanylate cyclase, GGDEF domain FY144_22135 PF08447 PAS fold FY144_22135 PF08448 PAS fold FY144_22145 PF07883 Cupin domain FY144_22145 PF05899 Protein of unknown function (DUF861) FY144_22150 PF17151 Periplasmic sensor domain FY144_22150 PF00990 Diguanylate cyclase, GGDEF domain FY144_22155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY144_22155 PF00529 HlyD membrane-fusion protein of T1SS FY144_22160 PF00873 AcrB/AcrD/AcrF family FY144_22165 PF08361 MAATS-type transcriptional repressor, C-terminal region FY144_22165 PF00440 Bacterial regulatory proteins, tetR family FY144_22170 PF00005 ABC transporter FY144_22175 PF02653 Branched-chain amino acid transport system / permease component FY144_22180 PF13407 Periplasmic binding protein domain FY144_22185 PF03466 LysR substrate binding domain FY144_22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_22190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY144_22190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY144_22210 PF03922 OmpW family FY144_22220 PF00005 ABC transporter FY144_22220 PF08402 TOBE domain FY144_22225 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22230 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22235 PF13416 Bacterial extracellular solute-binding protein FY144_22240 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY144_22240 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY144_22255 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY144_22255 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY144_22260 PF00005 ABC transporter FY144_22265 PF00950 ABC 3 transport family FY144_22270 PF01297 Zinc-uptake complex component A periplasmic FY144_22285 PF01053 Cys/Met metabolism PLP-dependent enzyme FY144_22290 PF01547 Bacterial extracellular solute-binding protein FY144_22295 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22300 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22305 PF00005 ABC transporter FY144_22305 PF17912 MalK OB fold domain FY144_22310 PF08402 TOBE domain FY144_22310 PF00005 ABC transporter FY144_22315 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22320 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22325 PF08013 Tagatose 6 phosphate kinase FY144_22330 PF00294 pfkB family carbohydrate kinase FY144_22345 PF16912 Glucose dehydrogenase C-terminus FY144_22345 PF08240 Alcohol dehydrogenase GroES-like domain FY144_22350 PF00356 Bacterial regulatory proteins, lacI family FY144_22365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY144_22365 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY144_22370 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_22380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_22385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_22385 PF03466 LysR substrate binding domain FY144_22390 PF07690 Major Facilitator Superfamily FY144_22395 PF02311 AraC-like ligand binding domain FY144_22395 PF12833 Helix-turn-helix domain FY144_22405 PF13416 Bacterial extracellular solute-binding protein FY144_22410 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22415 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22420 PF00005 ABC transporter FY144_22420 PF17912 MalK OB fold domain FY144_22425 PF00248 Aldo/keto reductase family FY144_22440 PF07729 FCD domain FY144_22440 PF00392 Bacterial regulatory proteins, gntR family FY144_22445 PF01370 NAD dependent epimerase/dehydratase family FY144_22450 PF04962 KduI/IolB family FY144_22460 PF00701 Dihydrodipicolinate synthetase family FY144_22465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_22465 PF13378 Enolase C-terminal domain-like FY144_22470 PF04909 Amidohydrolase FY144_22475 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_22485 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_22490 PF12833 Helix-turn-helix domain FY144_22490 PF02311 AraC-like ligand binding domain FY144_22495 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22500 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22505 PF08402 TOBE domain FY144_22505 PF00005 ABC transporter FY144_22515 PF00295 Glycosyl hydrolases family 28 FY144_22520 PF07470 Glycosyl Hydrolase Family 88 FY144_22525 PF00550 Phosphopantetheine attachment site FY144_22545 PF01165 Ribosomal protein S21 FY144_22555 PF00313 'Cold-shock' DNA-binding domain FY144_22560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_22560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_22575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_22575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_22580 PF00440 Bacterial regulatory proteins, tetR family FY144_22580 PF17938 Tetracyclin repressor-like, C-terminal domain FY144_22585 PF13416 Bacterial extracellular solute-binding protein FY144_22590 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22595 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22600 PF00005 ABC transporter FY144_22600 PF03459 TOBE domain FY144_22600 PF17912 MalK OB fold domain FY144_22615 PF01261 Xylose isomerase-like TIM barrel FY144_22620 PF01842 ACT domain FY144_22620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY144_22620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY144_22630 PF00356 Bacterial regulatory proteins, lacI family FY144_22645 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY144_22650 PF17912 MalK OB fold domain FY144_22650 PF00005 ABC transporter FY144_22660 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22665 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22670 PF00005 ABC transporter FY144_22675 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22680 PF09084 NMT1/THI5 like FY144_22685 PF00296 Luciferase-like monooxygenase FY144_22690 PF17912 MalK OB fold domain FY144_22690 PF00005 ABC transporter FY144_22695 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22700 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22705 PF13416 Bacterial extracellular solute-binding protein FY144_22720 PF08447 PAS fold FY144_22720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_22720 PF13426 PAS domain FY144_22745 PF00005 ABC transporter FY144_22745 PF08402 TOBE domain FY144_22755 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22760 PF00528 Binding-protein-dependent transport system inner membrane component FY144_22765 PF01177 Asp/Glu/Hydantoin racemase FY144_22805 PF03466 LysR substrate binding domain FY144_22805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_22810 PF00144 Beta-lactamase FY144_22815 PF00860 Permease family FY144_22825 PF13460 NAD(P)H-binding FY144_22835 PF01494 FAD binding domain FY144_22840 PF01037 Lrp/AsnC ligand binding domain FY144_22865 PF00501 AMP-binding enzyme FY144_22865 PF13193 AMP-binding enzyme C-terminal domain FY144_22875 PF01614 Bacterial transcriptional regulator FY144_22875 PF09339 IclR helix-turn-helix domain FY144_22885 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY144_22885 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_22890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_22895 PF04199 Putative cyclase FY144_22900 PF01494 FAD binding domain FY144_22915 PF00196 Bacterial regulatory proteins, luxR family FY144_22915 PF00072 Response regulator receiver domain FY144_22920 PF00072 Response regulator receiver domain FY144_22920 PF00196 Bacterial regulatory proteins, luxR family FY144_22925 PF00512 His Kinase A (phospho-acceptor) domain FY144_22925 PF08448 PAS fold FY144_22925 PF13426 PAS domain FY144_22925 PF00072 Response regulator receiver domain FY144_22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_22930 PF00384 Molybdopterin oxidoreductase FY144_22935 PF00210 Ferritin-like domain FY144_22940 PF00561 alpha/beta hydrolase fold FY144_22950 PF06441 Epoxide hydrolase N terminus FY144_22955 PF00171 Aldehyde dehydrogenase family FY144_22960 PF02566 OsmC-like protein FY144_22965 PF00512 His Kinase A (phospho-acceptor) domain FY144_22965 PF00672 HAMP domain FY144_22965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_22970 PF00072 Response regulator receiver domain FY144_22970 PF00486 Transcriptional regulatory protein, C terminal FY144_22975 PF00561 alpha/beta hydrolase fold FY144_22985 PF00578 AhpC/TSA family FY144_22985 PF02683 Cytochrome C biogenesis protein transmembrane region FY144_22985 PF17991 Thioredoxin like C-terminal domain FY144_22995 PF07690 Major Facilitator Superfamily FY144_23000 PF00990 Diguanylate cyclase, GGDEF domain FY144_23010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_23010 PF00005 ABC transporter FY144_23020 PF00106 short chain dehydrogenase FY144_23020 PF00300 Histidine phosphatase superfamily (branch 1) FY144_23025 PF01266 FAD dependent oxidoreductase FY144_23030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_23040 PF00528 Binding-protein-dependent transport system inner membrane component FY144_23040 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_23045 PF01266 FAD dependent oxidoreductase FY144_23060 PF13649 Methyltransferase domain FY144_23065 PF00999 Sodium/hydrogen exchanger family FY144_23070 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY144_23075 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY144_23080 PF00459 Inositol monophosphatase family FY144_23095 PF01546 Peptidase family M20/M25/M40 FY144_23100 PF00455 DeoR C terminal sensor domain FY144_23100 PF08220 DeoR-like helix-turn-helix domain FY144_23105 PF00005 ABC transporter FY144_23105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_23110 PF00528 Binding-protein-dependent transport system inner membrane component FY144_23110 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_23115 PF00528 Binding-protein-dependent transport system inner membrane component FY144_23120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_23125 PF00465 Iron-containing alcohol dehydrogenase FY144_23130 PF00795 Carbon-nitrogen hydrolase FY144_23135 PF00005 ABC transporter FY144_23135 PF09383 NIL domain FY144_23140 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY144_23140 PF00005 ABC transporter FY144_23150 PF02653 Branched-chain amino acid transport system / permease component FY144_23155 PF13458 Periplasmic binding protein FY144_23190 PF00924 Mechanosensitive ion channel FY144_23205 PF13533 Biotin-lipoyl like FY144_23225 PF00440 Bacterial regulatory proteins, tetR family FY144_23250 PF07411 Domain of unknown function (DUF1508) FY144_23260 PF04717 Type VI secretion system, phage-baseplate injector FY144_23295 PF13005 zinc-finger binding domain of transposase IS66 FY144_23295 PF13007 Transposase C of IS166 homeodomain FY144_23295 PF13817 IS66 C-terminal element FY144_23295 PF03050 Transposase IS66 family FY144_23310 PF18284 DNA methylase N-terminal domain FY144_23310 PF00145 C-5 cytosine-specific DNA methylase FY144_23315 PF03852 DNA mismatch endonuclease Vsr FY144_23340 PF13505 Outer membrane protein beta-barrel domain FY144_23415 PF07690 Major Facilitator Superfamily FY144_23445 PF13614 AAA domain FY144_23445 PF00376 MerR family regulatory protein FY144_23450 PF07506 RepB plasmid partitioning protein FY144_23450 PF02195 ParB-like nuclease domain FY144_23455 PF03428 Replication protein C N-terminal domain FY144_23455 PF11800 Replication protein C C-terminal region FY144_23465 PF03466 LysR substrate binding domain FY144_23465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_23470 PF00239 Resolvase, N terminal domain FY144_23470 PF02796 Helix-turn-helix domain of resolvase FY144_23475 PF01526 Tn3 transposase DDE domain FY144_23475 PF13700 Domain of unknown function (DUF4158) FY144_23510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY144_23510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY144_23515 PF00005 ABC transporter FY144_23520 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_23525 PF00356 Bacterial regulatory proteins, lacI family FY144_23550 PF11972 HTH DNA binding domain FY144_23550 PF07756 Protein of unknown function (DUF1612) FY144_23580 PF00580 UvrD/REP helicase N-terminal domain FY144_23580 PF13361 UvrD-like helicase C-terminal domain FY144_23640 PF13091 PLD-like domain FY144_23640 PF13087 AAA domain FY144_23690 PF00535 Glycosyl transferase family 2 FY144_23690 PF02709 N-terminal domain of galactosyltransferase FY144_23710 PF00535 Glycosyl transferase family 2 FY144_23710 PF02709 N-terminal domain of galactosyltransferase FY144_23725 PF00196 Bacterial regulatory proteins, luxR family FY144_23725 PF00072 Response regulator receiver domain FY144_23730 PF00765 Autoinducer synthase FY144_23740 PF12867 DinB superfamily FY144_23740 PF03781 Sulfatase-modifying factor enzyme 1 FY144_23745 PF00925 GTP cyclohydrolase II FY144_23760 PF07690 Major Facilitator Superfamily FY144_23765 PF00672 HAMP domain FY144_23765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_23770 PF11871 Domain of unknown function (DUF3391) FY144_23770 PF01966 HD domain FY144_23780 PF01266 FAD dependent oxidoreductase FY144_23780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY144_23785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_23785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_23795 PF00528 Binding-protein-dependent transport system inner membrane component FY144_23800 PF00528 Binding-protein-dependent transport system inner membrane component FY144_23805 PF08402 TOBE domain FY144_23805 PF00005 ABC transporter FY144_23815 PF04198 Putative sugar-binding domain FY144_23840 PF12728 Helix-turn-helix domain FY144_23840 PF02661 Fic/DOC family FY144_23900 PF03466 LysR substrate binding domain FY144_23900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_23910 PF01638 HxlR-like helix-turn-helix FY144_23925 PF01638 HxlR-like helix-turn-helix FY144_23930 PF01638 HxlR-like helix-turn-helix FY144_23960 PF01068 ATP dependent DNA ligase domain FY144_23960 PF13298 DNA polymerase Ligase (LigD) FY144_23960 PF04679 ATP dependent DNA ligase C terminal region FY144_23980 PF01381 Helix-turn-helix FY144_23985 PF13657 HipA N-terminal domain FY144_23985 PF07804 HipA-like C-terminal domain FY144_24010 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_24030 PF00118 TCP-1/cpn60 chaperonin family FY144_24035 PF00166 Chaperonin 10 Kd subunit FY144_24065 PF02705 K+ potassium transporter FY144_24070 PF03466 LysR substrate binding domain FY144_24070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_24075 PF00248 Aldo/keto reductase family FY144_24080 PF00005 ABC transporter FY144_24080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_24085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_24085 PF00005 ABC transporter FY144_24090 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24090 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_24095 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_24105 PF07729 FCD domain FY144_24105 PF00392 Bacterial regulatory proteins, gntR family FY144_24110 PF00701 Dihydrodipicolinate synthetase family FY144_24115 PF13378 Enolase C-terminal domain-like FY144_24115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_24125 PF01850 PIN domain FY144_24130 PF07729 FCD domain FY144_24130 PF00392 Bacterial regulatory proteins, gntR family FY144_24140 PF00005 ABC transporter FY144_24145 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24150 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24155 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_24160 PF05378 Hydantoinase/oxoprolinase N-terminal region FY144_24160 PF01968 Hydantoinase/oxoprolinase FY144_24170 PF00155 Aminotransferase class I and II FY144_24175 PF00701 Dihydrodipicolinate synthetase family FY144_24190 PF05666 Fels-1 Prophage Protein-like FY144_24205 PF01569 PAP2 superfamily FY144_24220 PF12833 Helix-turn-helix domain FY144_24235 PF03328 HpcH/HpaI aldolase/citrate lyase family FY144_24240 PF00202 Aminotransferase class-III FY144_24245 PF00171 Aldehyde dehydrogenase family FY144_24250 PF01037 Lrp/AsnC ligand binding domain FY144_24255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_24260 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24265 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_24265 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24270 PF00005 ABC transporter FY144_24270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_24285 PF03737 Aldolase/RraA FY144_24305 PF07729 FCD domain FY144_24305 PF00392 Bacterial regulatory proteins, gntR family FY144_24315 PF13098 Thioredoxin-like domain FY144_24320 PF06965 Na+/H+ antiporter 1 FY144_24320 PF13462 Thioredoxin FY144_24325 PF02683 Cytochrome C biogenesis protein transmembrane region FY144_24325 PF11412 Disulphide bond corrector protein DsbC FY144_24330 PF00486 Transcriptional regulatory protein, C terminal FY144_24330 PF00072 Response regulator receiver domain FY144_24335 PF08521 Two-component sensor kinase N-terminal FY144_24335 PF00512 His Kinase A (phospho-acceptor) domain FY144_24335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_24340 PF03734 L,D-transpeptidase catalytic domain FY144_24340 PF17969 L,D-transpeptidase C-terminal domain FY144_24355 PF16859 Tetracyclin repressor-like, C-terminal domain FY144_24355 PF00440 Bacterial regulatory proteins, tetR family FY144_24360 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_24385 PF05284 Protein of unknown function (DUF736) FY144_24395 PF02899 Phage integrase, N-terminal SAM-like domain FY144_24395 PF00589 Phage integrase family FY144_24400 PF00589 Phage integrase family FY144_24405 PF02899 Phage integrase, N-terminal SAM-like domain FY144_24405 PF00589 Phage integrase family FY144_24410 PF05284 Protein of unknown function (DUF736) FY144_24435 PF04956 TrbC/VIRB2 family FY144_24440 PF05101 Type IV secretory pathway, VirB3-like protein FY144_24445 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY144_24460 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY144_24470 PF04335 VirB8 protein FY144_24475 PF03524 Conjugal transfer protein FY144_24480 PF03743 Bacterial conjugation TrbI-like protein FY144_24485 PF00437 Type II/IV secretion system protein FY144_24495 PF00216 Bacterial DNA-binding protein FY144_24505 PF02534 Type IV secretory system Conjugative DNA transfer FY144_24545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_24545 PF03466 LysR substrate binding domain FY144_24550 PF13378 Enolase C-terminal domain-like FY144_24550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_24555 PF00356 Bacterial regulatory proteins, lacI family FY144_24560 PF03401 Tripartite tricarboxylate transporter family receptor FY144_24565 PF07331 Tripartite tricarboxylate transporter TctB family FY144_24570 PF01970 Tripartite tricarboxylate transporter TctA family FY144_24595 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY144_24600 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY144_24600 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY144_24600 PF00034 Cytochrome c FY144_24615 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_24615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY144_24645 PF05035 2-keto-3-deoxy-galactonokinase FY144_24650 PF00701 Dihydrodipicolinate synthetase family FY144_24655 PF13378 Enolase C-terminal domain-like FY144_24655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY144_24665 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24670 PF00528 Binding-protein-dependent transport system inner membrane component FY144_24675 PF17912 MalK OB fold domain FY144_24675 PF00005 ABC transporter FY144_24680 PF16363 GDP-mannose 4,6 dehydratase FY144_24685 PF01614 Bacterial transcriptional regulator FY144_24685 PF09339 IclR helix-turn-helix domain FY144_24695 PF13291 ACT domain FY144_24695 PF00291 Pyridoxal-phosphate dependent enzyme FY144_24705 PF13426 PAS domain FY144_24705 PF13581 Histidine kinase-like ATPase domain FY144_24705 PF07536 HWE histidine kinase FY144_24730 PF05661 Protein of unknown function (DUF808) FY144_24735 PF01544 CorA-like Mg2+ transporter protein FY144_24765 PF13419 Haloacid dehalogenase-like hydrolase FY144_24770 PF13936 Helix-turn-helix domain FY144_24770 PF00665 Integrase core domain FY144_24780 PF02661 Fic/DOC family FY144_24780 PF13784 Fic/DOC family N-terminal FY144_24795 PF00011 Hsp20/alpha crystallin family FY144_24810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY144_24815 PF03480 Bacterial extracellular solute-binding protein, family 7 FY144_24820 PF00072 Response regulator receiver domain FY144_24820 PF00196 Bacterial regulatory proteins, luxR family FY144_24825 PF07730 Histidine kinase FY144_24825 PF17200 Single Cache domain 2 FY144_24835 PF06965 Na+/H+ antiporter 1 FY144_24845 PF00583 Acetyltransferase (GNAT) family FY144_24850 PF01381 Helix-turn-helix FY144_24850 PF08671 Anti-repressor SinI FY144_24870 PF03466 LysR substrate binding domain FY144_24870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_24875 PF07690 Major Facilitator Superfamily FY144_24925 PF03167 Uracil DNA glycosylase superfamily FY144_24955 PF08281 Sigma-70, region 4 FY144_24955 PF04542 Sigma-70 region 2 FY144_24980 PF05974 Domain of unknown function (DUF892) FY144_24985 PF18011 C-terminal domain found in long catalases FY144_24985 PF00199 Catalase FY144_24985 PF06628 Catalase-related immune-responsive FY144_25000 PF01566 Natural resistance-associated macrophage protein FY144_25000 PF03358 NADPH-dependent FMN reductase FY144_25025 PF01758 Sodium Bile acid symporter family FY144_25055 PF01361 Tautomerase enzyme FY144_25065 PF03358 NADPH-dependent FMN reductase FY144_25085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_25085 PF07730 Histidine kinase FY144_25085 PF00672 HAMP domain FY144_25090 PF00196 Bacterial regulatory proteins, luxR family FY144_25090 PF00072 Response regulator receiver domain FY144_25110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_25110 PF03466 LysR substrate binding domain FY144_25115 PF02678 Pirin FY144_25115 PF05726 Pirin C-terminal cupin domain FY144_25125 PF03358 NADPH-dependent FMN reductase FY144_25155 PF00106 short chain dehydrogenase FY144_25175 PF00106 short chain dehydrogenase FY144_25185 PF12852 Cupin FY144_25185 PF12833 Helix-turn-helix domain FY144_25200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_25200 PF03466 LysR substrate binding domain FY144_25205 PF04542 Sigma-70 region 2 FY144_25205 PF08281 Sigma-70, region 4 FY144_25215 PF07715 TonB-dependent Receptor Plug Domain FY144_25215 PF00593 TonB dependent receptor FY144_25225 PF01032 FecCD transport family FY144_25230 PF00694 Aconitase C-terminal domain FY144_25230 PF00330 Aconitase family (aconitate hydratase) FY144_25240 PF01970 Tripartite tricarboxylate transporter TctA family FY144_25265 PF08281 Sigma-70, region 4 FY144_25265 PF04542 Sigma-70 region 2 FY144_25270 PF00082 Subtilase family FY144_25285 PF02595 Glycerate kinase family FY144_25300 PF00106 short chain dehydrogenase FY144_25310 PF03466 LysR substrate binding domain FY144_25310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_25325 PF12833 Helix-turn-helix domain FY144_25325 PF06719 AraC-type transcriptional regulator N-terminus FY144_25340 PF00857 Isochorismatase family FY144_25350 PF00248 Aldo/keto reductase family FY144_25355 PF00561 alpha/beta hydrolase fold FY144_25360 PF08659 KR domain FY144_25360 PF00550 Phosphopantetheine attachment site FY144_25360 PF14765 Polyketide synthase dehydratase FY144_25360 PF00109 Beta-ketoacyl synthase, N-terminal domain FY144_25360 PF02801 Beta-ketoacyl synthase, C-terminal domain FY144_25360 PF08990 Erythronolide synthase docking FY144_25360 PF08240 Alcohol dehydrogenase GroES-like domain FY144_25360 PF00698 Acyl transferase domain FY144_25360 PF16197 Ketoacyl-synthetase C-terminal extension FY144_25365 PF00107 Zinc-binding dehydrogenase FY144_25365 PF08240 Alcohol dehydrogenase GroES-like domain FY144_25370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY144_25375 PF00106 short chain dehydrogenase FY144_25380 PF00440 Bacterial regulatory proteins, tetR family FY144_25385 PF02311 AraC-like ligand binding domain FY144_25385 PF12833 Helix-turn-helix domain FY144_25390 PF01810 LysE type translocator FY144_25400 PF01850 PIN domain FY144_25405 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY144_25410 PF00732 GMC oxidoreductase FY144_25410 PF05199 GMC oxidoreductase FY144_25420 PF01047 MarR family FY144_25435 PF03466 LysR substrate binding domain FY144_25435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_25450 PF01979 Amidohydrolase family FY144_25450 PF13382 Adenine deaminase C-terminal domain FY144_25465 PF00005 ABC transporter FY144_25495 PF00817 impB/mucB/samB family FY144_25495 PF11799 impB/mucB/samB family C-terminal domain FY144_25510 PF17912 MalK OB fold domain FY144_25510 PF00005 ABC transporter FY144_25515 PF00528 Binding-protein-dependent transport system inner membrane component FY144_25520 PF00528 Binding-protein-dependent transport system inner membrane component FY144_25545 PF00455 DeoR C terminal sensor domain FY144_25545 PF08220 DeoR-like helix-turn-helix domain FY144_25550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_25550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_25555 PF00005 ABC transporter FY144_25560 PF02653 Branched-chain amino acid transport system / permease component FY144_25565 PF13407 Periplasmic binding protein domain FY144_25570 PF00480 ROK family FY144_25595 PF07715 TonB-dependent Receptor Plug Domain FY144_25595 PF00593 TonB dependent receptor FY144_25630 PF00313 'Cold-shock' DNA-binding domain FY144_25640 PF00781 Diacylglycerol kinase catalytic domain FY144_25640 PF02142 MGS-like domain FY144_25645 PF01037 Lrp/AsnC ligand binding domain FY144_25660 PF07690 Major Facilitator Superfamily FY144_25675 PF01047 MarR family FY144_25680 PF07690 Major Facilitator Superfamily FY144_25685 PF07690 Major Facilitator Superfamily FY144_25700 PF08240 Alcohol dehydrogenase GroES-like domain FY144_25700 PF00107 Zinc-binding dehydrogenase FY144_25710 PF07690 Major Facilitator Superfamily FY144_25715 PF01047 MarR family FY144_25725 PF02371 Transposase IS116/IS110/IS902 family FY144_25725 PF01548 Transposase FY144_25730 PF01548 Transposase FY144_25730 PF02371 Transposase IS116/IS110/IS902 family FY144_25770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_25770 PF00512 His Kinase A (phospho-acceptor) domain FY144_25770 PF13426 PAS domain FY144_25770 PF00672 HAMP domain FY144_25775 PF00072 Response regulator receiver domain FY144_25775 PF00196 Bacterial regulatory proteins, luxR family FY144_25820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY144_25830 PF00005 ABC transporter FY144_25835 PF13407 Periplasmic binding protein domain FY144_25840 PF02653 Branched-chain amino acid transport system / permease component FY144_25845 PF00456 Transketolase, thiamine diphosphate binding domain FY144_25850 PF02780 Transketolase, C-terminal domain FY144_25850 PF02779 Transketolase, pyrimidine binding domain FY144_25855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY144_25855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY144_25860 PF04198 Putative sugar-binding domain FY144_25865 PF00106 short chain dehydrogenase FY144_25870 PF12833 Helix-turn-helix domain FY144_25870 PF01965 DJ-1/PfpI family FY144_25880 PF00132 Bacterial transferase hexapeptide (six repeats) FY144_25905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_25905 PF00512 His Kinase A (phospho-acceptor) domain FY144_25905 PF00989 PAS fold FY144_25910 PF00196 Bacterial regulatory proteins, luxR family FY144_25910 PF00072 Response regulator receiver domain FY144_25915 PF13545 Crp-like helix-turn-helix domain FY144_25915 PF00027 Cyclic nucleotide-binding domain FY144_25920 PF00563 EAL domain FY144_25920 PF00990 Diguanylate cyclase, GGDEF domain FY144_25920 PF03707 Bacterial signalling protein N terminal repeat FY144_25920 PF13188 PAS domain FY144_25930 PF09957 Bacterial antitoxin of type II TA system, VapB FY144_25935 PF01850 PIN domain FY144_25955 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY144_25955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY144_25960 PF01261 Xylose isomerase-like TIM barrel FY144_25965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_25965 PF00005 ABC transporter FY144_25970 PF00528 Binding-protein-dependent transport system inner membrane component FY144_25970 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_25975 PF00528 Binding-protein-dependent transport system inner membrane component FY144_25985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_25990 PF00356 Bacterial regulatory proteins, lacI family FY144_25995 PF00487 Fatty acid desaturase FY144_26025 PF06745 KaiC FY144_26030 PF13426 PAS domain FY144_26030 PF07536 HWE histidine kinase FY144_26030 PF08447 PAS fold FY144_26045 PF00005 ABC transporter FY144_26045 PF02687 FtsX-like permease family FY144_26045 PF12704 MacB-like periplasmic core domain FY144_26050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY144_26055 PF00989 PAS fold FY144_26055 PF00512 His Kinase A (phospho-acceptor) domain FY144_26055 PF11808 Phosphate regulon sensor protein PhoR FY144_26055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_26060 PF00072 Response regulator receiver domain FY144_26060 PF00486 Transcriptional regulatory protein, C terminal FY144_26115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_26115 PF03466 LysR substrate binding domain FY144_26120 PF00753 Metallo-beta-lactamase superfamily FY144_26135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_26135 PF03466 LysR substrate binding domain FY144_26150 PF13614 AAA domain FY144_26155 PF02195 ParB-like nuclease domain FY144_26155 PF07506 RepB plasmid partitioning protein FY144_26160 PF03428 Replication protein C N-terminal domain FY144_26160 PF11800 Replication protein C C-terminal region FY144_26165 PF00239 Resolvase, N terminal domain FY144_26170 PF07756 Protein of unknown function (DUF1612) FY144_26170 PF11972 HTH DNA binding domain FY144_26190 PF08808 RES domain FY144_26210 PF03466 LysR substrate binding domain FY144_26210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_26220 PF00528 Binding-protein-dependent transport system inner membrane component FY144_26225 PF00005 ABC transporter FY144_26230 PF09084 NMT1/THI5 like FY144_26235 PF00296 Luciferase-like monooxygenase FY144_26240 PF00296 Luciferase-like monooxygenase FY144_26250 PF00732 GMC oxidoreductase FY144_26250 PF05199 GMC oxidoreductase FY144_26255 PF00561 alpha/beta hydrolase fold FY144_26275 PF02653 Branched-chain amino acid transport system / permease component FY144_26280 PF00005 ABC transporter FY144_26290 PF00753 Metallo-beta-lactamase superfamily FY144_26295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY144_26295 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY144_26295 PF02770 Acyl-CoA dehydrogenase, middle domain FY144_26300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_26305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_26305 PF00005 ABC transporter FY144_26310 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_26310 PF00528 Binding-protein-dependent transport system inner membrane component FY144_26315 PF00528 Binding-protein-dependent transport system inner membrane component FY144_26325 PF00296 Luciferase-like monooxygenase FY144_26330 PF00296 Luciferase-like monooxygenase FY144_26335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_26335 PF03466 LysR substrate binding domain FY144_26345 PF00004 ATPase family associated with various cellular activities (AAA) FY144_26345 PF01434 Peptidase family M41 FY144_26345 PF17862 AAA+ lid domain FY144_26355 PF00296 Luciferase-like monooxygenase FY144_26360 PF09084 NMT1/THI5 like FY144_26365 PF00528 Binding-protein-dependent transport system inner membrane component FY144_26370 PF00005 ABC transporter FY144_26375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_26375 PF03466 LysR substrate binding domain FY144_26385 PF01068 ATP dependent DNA ligase domain FY144_26385 PF04679 ATP dependent DNA ligase C terminal region FY144_26385 PF13298 DNA polymerase Ligase (LigD) FY144_26400 PF14579 Helix-hairpin-helix motif FY144_26400 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY144_26400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY144_26400 PF02811 PHP domain FY144_26415 PF17841 BID domain of Bartonella effector protein (Bep) FY144_26415 PF02661 Fic/DOC family FY144_26440 PF17762 HTH domain found in ParB protein FY144_26440 PF02195 ParB-like nuclease domain FY144_26460 PF08274 PhnA Zinc-Ribbon FY144_26460 PF03831 PhnA domain FY144_26480 PF05284 Protein of unknown function (DUF736) FY144_26505 PF00293 NUDIX domain FY144_26515 PF05284 Protein of unknown function (DUF736) FY144_26520 PF00216 Bacterial DNA-binding protein FY144_26540 PF02534 Type IV secretory system Conjugative DNA transfer FY144_26545 PF06412 Conjugal transfer protein TraD FY144_26550 PF07820 TraC-like protein FY144_26555 PF17841 BID domain of Bartonella effector protein (Bep) FY144_26555 PF03389 MobA/MobL family FY144_26555 PF01443 Viral (Superfamily 1) RNA helicase FY144_26560 PF10502 Signal peptidase, peptidase S26 FY144_26565 PF00795 Carbon-nitrogen hydrolase FY144_26570 PF06871 TraH_2 FY144_26575 PF09228 Prokaryotic Transcriptional repressor TraM FY144_26580 PF13426 PAS domain FY144_26580 PF08447 PAS fold FY144_26580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY144_26590 PF03472 Autoinducer binding domain FY144_26590 PF00196 Bacterial regulatory proteins, luxR family FY144_26595 PF00128 Alpha amylase, catalytic domain FY144_26600 PF02690 Na+/Pi-cotransporter FY144_26610 PF00455 DeoR C terminal sensor domain FY144_26610 PF08220 DeoR-like helix-turn-helix domain FY144_26615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY144_26620 PF00005 ABC transporter FY144_26620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_26625 PF00005 ABC transporter FY144_26625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY144_26630 PF00528 Binding-protein-dependent transport system inner membrane component FY144_26635 PF12911 N-terminal TM domain of oligopeptide transport permease C FY144_26635 PF00528 Binding-protein-dependent transport system inner membrane component FY144_26640 PF03009 Glycerophosphoryl diester phosphodiesterase family FY144_26645 PF00459 Inositol monophosphatase family FY144_26670 PF00067 Cytochrome P450 FY144_26675 PF00067 Cytochrome P450 FY144_26690 PF06903 VirK protein FY144_26720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY144_26720 PF00512 His Kinase A (phospho-acceptor) domain FY144_26725 PF01464 Transglycosylase SLT domain FY144_26730 PF04956 TrbC/VIRB2 family FY144_26735 PF05101 Type IV secretory pathway, VirB3-like protein FY144_26740 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY144_26750 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY144_26755 PF17413 Outer membrane lipoprotein virB7 FY144_26760 PF04335 VirB8 protein FY144_26765 PF03524 Conjugal transfer protein FY144_26770 PF03743 Bacterial conjugation TrbI-like protein FY144_26775 PF00437 Type II/IV secretion system protein FY144_26780 PF00072 Response regulator receiver domain FY144_26780 PF00486 Transcriptional regulatory protein, C terminal FY144_26785 PF07181 VirC2 protein FY144_26790 PF07015 VirC1 protein FY144_26795 PF07328 T-DNA border endonuclease VirD1 FY144_26800 PF03432 Relaxase/Mobilisation nuclease domain FY144_26810 PF02534 Type IV secretory system Conjugative DNA transfer FY144_26830 PF12189 Single-strand DNA-binding protein FY144_26835 PF07229 VirE2 FY144_26855 PF05717 IS66 Orf2 like protein FY144_26860 PF00196 Bacterial regulatory proteins, luxR family FY144_26860 PF03472 Autoinducer binding domain FY144_26890 PF02027 RolB/RolC glucosidase family FY144_26915 PF00106 short chain dehydrogenase FY144_26915 PF00300 Histidine phosphatase superfamily (branch 1) FY144_26925 PF02027 RolB/RolC glucosidase family FY144_26930 PF01425 Amidase FY144_26935 PF01593 Flavin containing amine oxidoreductase FY144_26935 PF02027 RolB/RolC glucosidase family FY144_26945 PF02027 RolB/RolC glucosidase family FY144_26950 PF02027 RolB/RolC glucosidase family FY144_26955 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY144_26955 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY144_26960 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY144_26965 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY144_26970 PF00491 Arginase family FY144_26975 PF04324 BFD-like [2Fe-2S] binding domain FY144_26975 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY144_26985 PF01266 FAD dependent oxidoreductase FY144_26990 PF01968 Hydantoinase/oxoprolinase FY144_26990 PF05378 Hydantoinase/oxoprolinase N-terminal region FY144_27000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_27000 PF03466 LysR substrate binding domain FY144_27005 PF00528 Binding-protein-dependent transport system inner membrane component FY144_27010 PF00528 Binding-protein-dependent transport system inner membrane component FY144_27015 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY144_27020 PF00005 ABC transporter FY144_27025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY144_27025 PF03466 LysR substrate binding domain FY144_27035 PF03743 Bacterial conjugation TrbI-like protein FY144_27045 PF03524 Conjugal transfer protein FY144_27050 PF04335 VirB8 protein FY144_27055 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY144_27060 PF10907 Protein of unknown function (DUF2749) FY144_27070 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY144_27075 PF05101 Type IV secretory pathway, VirB3-like protein FY144_27080 PF04956 TrbC/VIRB2 family FY144_27085 PF00437 Type II/IV secretion system protein FY144_27090 PF00765 Autoinducer synthase