locus-tag class description FY145_00005 PF00308 Bacterial dnaA protein FY145_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY145_00005 PF11638 DnaA N-terminal domain FY145_00010 PF06969 HemN C-terminal domain FY145_00010 PF04055 Radical SAM superfamily FY145_00015 PF01725 Ham1 family FY145_00020 PF01138 3' exoribonuclease family, domain 1 FY145_00020 PF03725 3' exoribonuclease family, domain 2 FY145_00025 PF01628 HrcA protein C terminal domain FY145_00030 PF01025 GrpE FY145_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY145_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY145_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY145_00045 PF04552 Sigma-54, DNA binding domain FY145_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY145_00045 PF04963 Sigma-54 factor, core binding domain FY145_00050 PF00005 ABC transporter FY145_00055 PF03968 OstA-like protein FY145_00065 PF01343 Peptidase family S49 FY145_00070 PF00216 Bacterial DNA-binding protein FY145_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY145_00080 PF17785 PUA-like domain FY145_00085 PF00588 SpoU rRNA Methylase family FY145_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY145_00090 PF01252 Signal peptidase (SPase) II FY145_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY145_00095 PF00072 Response regulator receiver domain FY145_00095 PF01627 Hpt domain FY145_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_00095 PF00672 HAMP domain FY145_00095 PF00512 His Kinase A (phospho-acceptor) domain FY145_00105 PF01624 MutS domain I FY145_00105 PF05188 MutS domain II FY145_00105 PF05192 MutS domain III FY145_00105 PF05190 MutS family domain IV FY145_00105 PF00488 MutS domain V FY145_00110 PF01842 ACT domain FY145_00110 PF08335 GlnD PII-uridylyltransferase FY145_00110 PF01966 HD domain FY145_00110 PF01909 Nucleotidyltransferase domain FY145_00115 PF03023 Lipid II flippase MurJ FY145_00125 PF00579 tRNA synthetases class I (W and Y) FY145_00135 PF01106 NifU-like domain FY145_00140 PF00814 Glycoprotease family FY145_00150 PF01475 Ferric uptake regulator family FY145_00155 PF01553 Acyltransferase FY145_00160 PF04055 Radical SAM superfamily FY145_00160 PF01938 TRAM domain FY145_00160 PF00919 Uncharacterized protein family UPF0004 FY145_00165 PF02562 PhoH-like protein FY145_00170 PF02130 Uncharacterized protein family UPF0054 FY145_00175 PF00571 CBS domain FY145_00175 PF03471 Transporter associated domain FY145_00180 PF00795 Carbon-nitrogen hydrolase FY145_00185 PF01381 Helix-turn-helix FY145_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY145_00190 PF02772 S-adenosylmethionine synthetase, central domain FY145_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY145_00195 PF02390 Putative methyltransferase FY145_00200 PF00294 pfkB family carbohydrate kinase FY145_00205 PF02646 RmuC family FY145_00210 PF01327 Polypeptide deformylase FY145_00215 PF02911 Formyl transferase, C-terminal domain FY145_00215 PF00551 Formyl transferase FY145_00220 PF01416 tRNA pseudouridine synthase FY145_00230 PF07687 Peptidase dimerisation domain FY145_00230 PF01546 Peptidase family M20/M25/M40 FY145_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY145_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY145_00245 PF00672 HAMP domain FY145_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY145_00255 PF00011 Hsp20/alpha crystallin family FY145_00280 PF00696 Amino acid kinase family FY145_00290 PF01926 50S ribosome-binding GTPase FY145_00295 PF14849 YidC periplasmic domain FY145_00295 PF02096 60Kd inner membrane protein FY145_00300 PF00825 Ribonuclease P FY145_00305 PF00468 Ribosomal protein L34 FY145_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_00310 PF00672 HAMP domain FY145_00315 PF00512 His Kinase A (phospho-acceptor) domain FY145_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_00325 PF01209 ubiE/COQ5 methyltransferase family FY145_00330 PF00005 ABC transporter FY145_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY145_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY145_00350 PF00149 Calcineurin-like phosphoesterase FY145_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY145_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY145_00365 PF05544 Proline racemase FY145_00370 PF01979 Amidohydrolase family FY145_00375 PF00156 Phosphoribosyl transferase domain FY145_00380 PF00294 pfkB family carbohydrate kinase FY145_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY145_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY145_00400 PF00342 Phosphoglucose isomerase FY145_00405 PF00501 AMP-binding enzyme FY145_00405 PF13193 AMP-binding enzyme C-terminal domain FY145_00410 PF08402 TOBE domain FY145_00410 PF00005 ABC transporter FY145_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY145_00425 PF07715 TonB-dependent Receptor Plug Domain FY145_00425 PF00593 TonB dependent receptor FY145_00445 PF01679 Proteolipid membrane potential modulator FY145_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY145_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_00475 PF00512 His Kinase A (phospho-acceptor) domain FY145_00475 PF00989 PAS fold FY145_00475 PF16736 Single Cache-like FY145_00480 PF12849 PBP superfamily domain FY145_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY145_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY145_00495 PF00005 ABC transporter FY145_00500 PF01895 PhoU domain FY145_00505 PF00486 Transcriptional regulatory protein, C terminal FY145_00505 PF00072 Response regulator receiver domain FY145_00515 PF00202 Aminotransferase class-III FY145_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY145_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY145_00525 PF01430 Hsp33 protein FY145_00530 PF04379 ApaG domain FY145_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY145_00545 PF00692 dUTPase FY145_00555 PF00589 Phage integrase family FY145_00555 PF13356 Arm DNA-binding domain FY145_00565 PF00239 Resolvase, N terminal domain FY145_00565 PF02796 Helix-turn-helix domain of resolvase FY145_00580 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FY145_00600 PF08671 Anti-repressor SinI FY145_00600 PF01381 Helix-turn-helix FY145_00640 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY145_00645 PF00230 Major intrinsic protein FY145_00685 PF00196 Bacterial regulatory proteins, luxR family FY145_00685 PF00072 Response regulator receiver domain FY145_00695 PF01180 Dihydroorotate dehydrogenase FY145_00730 PF02082 Transcriptional regulator FY145_00735 PF08494 DEAD/H associated FY145_00735 PF00271 Helicase conserved C-terminal domain FY145_00735 PF00270 DEAD/DEAH box helicase FY145_00755 PF01925 Sulfite exporter TauE/SafE FY145_00765 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_00765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_00765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_00765 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY145_00770 PF02803 Thiolase, C-terminal domain FY145_00770 PF00108 Thiolase, N-terminal domain FY145_00780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY145_00780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY145_00780 PF00378 Enoyl-CoA hydratase/isomerase FY145_00805 PF03334 Na+/H+ antiporter subunit FY145_00810 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY145_00815 PF01899 Na+/H+ ion antiporter subunit FY145_00820 PF00361 Proton-conducting membrane transporter FY145_00825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY145_00830 PF13244 Domain of unknown function (DUF4040) FY145_00830 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY145_00830 PF00361 Proton-conducting membrane transporter FY145_00830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY145_00840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_00850 PF00072 Response regulator receiver domain FY145_00855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_00855 PF02895 Signal transducing histidine kinase, homodimeric domain FY145_00855 PF01584 CheW-like domain FY145_00855 PF01627 Hpt domain FY145_00860 PF03705 CheR methyltransferase, all-alpha domain FY145_00860 PF01739 CheR methyltransferase, SAM binding domain FY145_00865 PF00072 Response regulator receiver domain FY145_00865 PF01339 CheB methylesterase FY145_00870 PF00072 Response regulator receiver domain FY145_00875 PF03975 CheD chemotactic sensory transduction FY145_00885 PF08345 Flagellar M-ring protein C-terminal FY145_00885 PF01514 Secretory protein of YscJ/FliF family FY145_00890 PF03472 Autoinducer binding domain FY145_00890 PF00196 Bacterial regulatory proteins, luxR family FY145_00900 PF00672 HAMP domain FY145_00900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_00905 PF01627 Hpt domain FY145_00905 PF00072 Response regulator receiver domain FY145_00905 PF00672 HAMP domain FY145_00905 PF00512 His Kinase A (phospho-acceptor) domain FY145_00910 PF01741 Large-conductance mechanosensitive channel, MscL FY145_00915 PF00155 Aminotransferase class I and II FY145_00920 PF01370 NAD dependent epimerase/dehydratase family FY145_00930 PF03884 DNA gyrase inhibitor YacG FY145_00935 PF02545 Maf-like protein FY145_00940 PF01176 Translation initiation factor 1A / IF-1 FY145_00950 PF06793 Uncharacterised protein family (UPF0262) FY145_00955 PF00815 Histidinol dehydrogenase FY145_00965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY145_01100 PF03592 Terminase small subunit FY145_01100 PF10668 Phage terminase small subunit FY145_01150 PF07724 AAA domain (Cdc48 subfamily) FY145_01150 PF10431 C-terminal, D2-small domain, of ClpB protein FY145_01150 PF06689 ClpX C4-type zinc finger FY145_01235 PF00589 Phage integrase family FY145_01240 PF00700 Bacterial flagellin C-terminal helical region FY145_01240 PF00669 Bacterial flagellin N-terminal helical region FY145_01245 PF00669 Bacterial flagellin N-terminal helical region FY145_01245 PF00700 Bacterial flagellin C-terminal helical region FY145_01250 PF00700 Bacterial flagellin C-terminal helical region FY145_01250 PF00669 Bacterial flagellin N-terminal helical region FY145_01255 PF00813 FliP family FY145_01265 PF02107 Flagellar L-ring protein FY145_01275 PF02119 Flagellar P-ring protein FY145_01280 PF13144 Chaperone for flagella basal body P-ring formation FY145_01285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY145_01285 PF00460 Flagella basal body rod protein FY145_01290 PF02049 Flagellar hook-basal body complex protein FliE FY145_01295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY145_01300 PF00460 Flagella basal body rod protein FY145_01310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY145_01310 PF18269 T3SS EscN ATPase C-terminal domain FY145_01315 PF00460 Flagella basal body rod protein FY145_01315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY145_01325 PF01618 MotA/TolQ/ExbB proton channel family FY145_01330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY145_01335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY145_01340 PF14841 FliG middle domain FY145_01340 PF14842 FliG N-terminal domain FY145_01340 PF01706 FliG C-terminal domain FY145_01345 PF01312 FlhB HrpN YscU SpaS Family FY145_01355 PF00700 Bacterial flagellin C-terminal helical region FY145_01355 PF00669 Bacterial flagellin N-terminal helical region FY145_01365 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY145_01365 PF00691 OmpA family FY145_01375 PF02120 Flagellar hook-length control protein FliK FY145_01385 PF00486 Transcriptional regulatory protein, C terminal FY145_01390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY145_01390 PF00460 Flagella basal body rod protein FY145_01390 PF07559 Flagellar basal body protein FlaE FY145_01410 PF07378 Flagellar protein FlbT FY145_01415 PF03963 Flagellar hook capping protein - N-terminal region FY145_01420 PF01313 Bacterial export proteins, family 3 FY145_01425 PF00771 FHIPEP family FY145_01430 PF01311 Bacterial export proteins, family 1 FY145_01465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY145_01465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY145_01470 PF00356 Bacterial regulatory proteins, lacI family FY145_01475 PF01547 Bacterial extracellular solute-binding protein FY145_01480 PF00528 Binding-protein-dependent transport system inner membrane component FY145_01485 PF00528 Binding-protein-dependent transport system inner membrane component FY145_01490 PF00128 Alpha amylase, catalytic domain FY145_01495 PF00005 ABC transporter FY145_01495 PF17912 MalK OB fold domain FY145_01495 PF03459 TOBE domain FY145_01510 PF00920 Dehydratase family FY145_01515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY145_01520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY145_01520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY145_01525 PF01266 FAD dependent oxidoreductase FY145_01530 PF00120 Glutamine synthetase, catalytic domain FY145_01555 PF00463 Isocitrate lyase family FY145_01560 PF06114 IrrE N-terminal-like domain FY145_01560 PF09856 Predicted transcriptional regulator (DUF2083) FY145_01560 PF01381 Helix-turn-helix FY145_01565 PF13416 Bacterial extracellular solute-binding protein FY145_01570 PF08402 TOBE domain FY145_01570 PF00005 ABC transporter FY145_01575 PF00528 Binding-protein-dependent transport system inner membrane component FY145_01580 PF00528 Binding-protein-dependent transport system inner membrane component FY145_01595 PF00989 PAS fold FY145_01595 PF13188 PAS domain FY145_01595 PF13426 PAS domain FY145_01595 PF00512 His Kinase A (phospho-acceptor) domain FY145_01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_01605 PF02541 Ppx/GppA phosphatase family FY145_01610 PF01728 FtsJ-like methyltransferase FY145_01615 PF07690 Major Facilitator Superfamily FY145_01620 PF00753 Metallo-beta-lactamase superfamily FY145_01625 PF00478 IMP dehydrogenase / GMP reductase domain FY145_01625 PF00571 CBS domain FY145_01635 PF08240 Alcohol dehydrogenase GroES-like domain FY145_01635 PF00107 Zinc-binding dehydrogenase FY145_01640 PF01738 Dienelactone hydrolase family FY145_01645 PF00994 Probable molybdopterin binding domain FY145_01650 PF08544 GHMP kinases C terminal FY145_01650 PF00288 GHMP kinases N terminal domain FY145_01660 PF00348 Polyprenyl synthetase FY145_01675 PF06965 Na+/H+ antiporter 1 FY145_01675 PF01343 Peptidase family S49 FY145_01685 PF02091 Glycyl-tRNA synthetase alpha subunit FY145_01695 PF04011 LemA family FY145_01700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY145_01710 PF05746 DALR anticodon binding domain FY145_01710 PF02092 Glycyl-tRNA synthetase beta subunit FY145_01715 PF04463 Protein of unknown function (DUF523) FY145_01720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_01720 PF00672 HAMP domain FY145_01720 PF17200 Single Cache domain 2 FY145_01730 PF02844 Phosphoribosylglycinamide synthetase, N domain FY145_01730 PF02843 Phosphoribosylglycinamide synthetase, C domain FY145_01730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY145_01735 PF00575 S1 RNA binding domain FY145_01735 PF17674 HHH domain FY145_01735 PF16921 Tex protein YqgF-like domain FY145_01735 PF09371 Tex-like protein N-terminal domain FY145_01750 PF01040 UbiA prenyltransferase family FY145_01765 PF03466 LysR substrate binding domain FY145_01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_01775 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY145_01780 PF04452 RNA methyltransferase FY145_01785 PF01384 Phosphate transporter family FY145_01795 PF05116 Sucrose-6F-phosphate phosphohydrolase FY145_01800 PF00534 Glycosyl transferases group 1 FY145_01800 PF13439 Glycosyltransferase Family 4 FY145_01805 PF00392 Bacterial regulatory proteins, gntR family FY145_01805 PF07729 FCD domain FY145_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_01815 PF03466 LysR substrate binding domain FY145_01820 PF02913 FAD linked oxidases, C-terminal domain FY145_01820 PF01565 FAD binding domain FY145_01825 PF02913 FAD linked oxidases, C-terminal domain FY145_01825 PF01565 FAD binding domain FY145_01830 PF02754 Cysteine-rich domain FY145_01830 PF13183 4Fe-4S dicluster domain FY145_01840 PF17969 L,D-transpeptidase C-terminal domain FY145_01840 PF03734 L,D-transpeptidase catalytic domain FY145_01845 PF03352 Methyladenine glycosylase FY145_01855 PF03601 Conserved hypothetical protein 698 FY145_01860 PF03466 LysR substrate binding domain FY145_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_01890 PF13393 Histidyl-tRNA synthetase FY145_01890 PF03129 Anticodon binding domain FY145_01900 PF13393 Histidyl-tRNA synthetase FY145_01905 PF01634 ATP phosphoribosyltransferase FY145_01910 PF07681 DoxX FY145_01920 PF00118 TCP-1/cpn60 chaperonin family FY145_01925 PF00166 Chaperonin 10 Kd subunit FY145_01935 PF06574 FAD synthetase FY145_01935 PF01687 Riboflavin kinase FY145_01940 PF08264 Anticodon-binding domain of tRNA FY145_01940 PF00133 tRNA synthetases class I (I, L, M and V) FY145_01950 PF14437 MafB19-like deaminase FY145_01955 PF00849 RNA pseudouridylate synthase FY145_01955 PF01479 S4 domain FY145_01965 PF01734 Patatin-like phospholipase FY145_01970 PF00999 Sodium/hydrogen exchanger family FY145_01970 PF02254 TrkA-N domain FY145_01975 PF01523 Putative modulator of DNA gyrase FY145_01980 PF00459 Inositol monophosphatase family FY145_01990 PF00534 Glycosyl transferases group 1 FY145_01990 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY145_02000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY145_02010 PF08676 MutL C terminal dimerisation domain FY145_02010 PF01119 DNA mismatch repair protein, C-terminal domain FY145_02015 PF00486 Transcriptional regulatory protein, C terminal FY145_02015 PF00072 Response regulator receiver domain FY145_02020 PF03707 Bacterial signalling protein N terminal repeat FY145_02020 PF13188 PAS domain FY145_02020 PF00563 EAL domain FY145_02020 PF00990 Diguanylate cyclase, GGDEF domain FY145_02025 PF08450 SMP-30/Gluconolactonase/LRE-like region FY145_02030 PF01081 KDPG and KHG aldolase FY145_02035 PF05035 2-keto-3-deoxy-galactonokinase FY145_02045 PF09339 IclR helix-turn-helix domain FY145_02045 PF01614 Bacterial transcriptional regulator FY145_02050 PF03472 Autoinducer binding domain FY145_02050 PF00196 Bacterial regulatory proteins, luxR family FY145_02060 PF10609 NUBPL iron-transfer P-loop NTPase FY145_02065 PF01544 CorA-like Mg2+ transporter protein FY145_02070 PF02705 K+ potassium transporter FY145_02085 PF00119 ATP synthase A chain FY145_02090 PF00137 ATP synthase subunit C FY145_02095 PF00430 ATP synthase B/B' CF(0) FY145_02100 PF00430 ATP synthase B/B' CF(0) FY145_02105 PF09828 Chromate resistance exported protein FY145_02110 PF02417 Chromate transporter FY145_02115 PF01351 Ribonuclease HII FY145_02130 PF02913 FAD linked oxidases, C-terminal domain FY145_02130 PF01565 FAD binding domain FY145_02135 PF03481 Putative GTP-binding controlling metal-binding FY145_02135 PF01300 Telomere recombination FY145_02145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY145_02145 PF00355 Rieske [2Fe-2S] domain FY145_02150 PF00970 Oxidoreductase FAD-binding domain FY145_02150 PF00111 2Fe-2S iron-sulfur cluster binding domain FY145_02150 PF00175 Oxidoreductase NAD-binding domain FY145_02155 PF07886 BA14K-like protein FY145_02160 PF07886 BA14K-like protein FY145_02170 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY145_02170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_02170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_02170 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_02185 PF05958 tRNA (Uracil-5-)-methyltransferase FY145_02190 PF01728 FtsJ-like methyltransferase FY145_02190 PF01479 S4 domain FY145_02195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_02195 PF02203 Tar ligand binding domain homologue FY145_02195 PF00672 HAMP domain FY145_02205 PF01037 Lrp/AsnC ligand binding domain FY145_02230 PF02780 Transketolase, C-terminal domain FY145_02230 PF02779 Transketolase, pyrimidine binding domain FY145_02230 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY145_02235 PF05726 Pirin C-terminal cupin domain FY145_02235 PF02678 Pirin FY145_02240 PF02609 Exonuclease VII small subunit FY145_02245 PF00850 Histone deacetylase domain FY145_02250 PF02632 BioY family FY145_02255 PF02361 Cobalt transport protein FY145_02260 PF00005 ABC transporter FY145_02265 PF06224 Winged helix DNA-binding domain FY145_02270 PF00925 GTP cyclohydrolase II FY145_02270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY145_02275 PF01264 Chorismate synthase FY145_02290 PF00300 Histidine phosphatase superfamily (branch 1) FY145_02300 PF00684 DnaJ central domain FY145_02300 PF01556 DnaJ C terminal domain FY145_02300 PF00226 DnaJ domain FY145_02310 PF01243 Pyridoxamine 5'-phosphate oxidase FY145_02310 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY145_02330 PF13419 Haloacid dehalogenase-like hydrolase FY145_02340 PF01523 Putative modulator of DNA gyrase FY145_02350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY145_02350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY145_02355 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY145_02360 PF01040 UbiA prenyltransferase family FY145_02365 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY145_02370 PF00510 Cytochrome c oxidase subunit III FY145_02380 PF02104 SURF1 family FY145_02385 PF02401 LytB protein FY145_02390 PF01636 Phosphotransferase enzyme family FY145_02395 PF00075 RNase H FY145_02405 PF00462 Glutaredoxin FY145_02405 PF08534 Redoxin FY145_02415 PF02622 Uncharacterized ACR, COG1678 FY145_02420 PF05532 CsbD-like FY145_02425 PF10005 zinc-ribbon domain FY145_02425 PF15887 Putative zinc-binding metallo-peptidase FY145_02430 PF03707 Bacterial signalling protein N terminal repeat FY145_02430 PF00990 Diguanylate cyclase, GGDEF domain FY145_02430 PF13188 PAS domain FY145_02430 PF00563 EAL domain FY145_02435 PF13302 Acetyltransferase (GNAT) domain FY145_02440 PF00675 Insulinase (Peptidase family M16) FY145_02440 PF05193 Peptidase M16 inactive domain FY145_02445 PF00291 Pyridoxal-phosphate dependent enzyme FY145_02445 PF14821 Threonine synthase N terminus FY145_02465 PF13419 Haloacid dehalogenase-like hydrolase FY145_02470 PF07729 FCD domain FY145_02470 PF00392 Bacterial regulatory proteins, gntR family FY145_02485 PF01555 DNA methylase FY145_02485 PF18755 Restriction Enzyme Adenine Methylase Associated FY145_02490 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY145_02495 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY145_02505 PF00730 HhH-GPD superfamily base excision DNA repair protein FY145_02505 PF14815 NUDIX domain FY145_02520 PF13462 Thioredoxin FY145_02525 PF02463 RecF/RecN/SMC N terminal domain FY145_02530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_02535 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY145_02535 PF02896 PEP-utilising enzyme, TIM barrel domain FY145_02535 PF00391 PEP-utilising enzyme, mobile domain FY145_02545 PF00375 Sodium:dicarboxylate symporter family FY145_02570 PF06039 Malate:quinone oxidoreductase (Mqo) FY145_02585 PF00009 Elongation factor Tu GTP binding domain FY145_02590 PF01507 Phosphoadenosine phosphosulfate reductase family FY145_02595 PF01507 Phosphoadenosine phosphosulfate reductase family FY145_02600 PF02082 Transcriptional regulator FY145_02610 PF00528 Binding-protein-dependent transport system inner membrane component FY145_02615 PF00528 Binding-protein-dependent transport system inner membrane component FY145_02620 PF00005 ABC transporter FY145_02620 PF12857 TOBE-like domain FY145_02625 PF14765 Polyketide synthase dehydratase FY145_02625 PF00107 Zinc-binding dehydrogenase FY145_02625 PF00550 Phosphopantetheine attachment site FY145_02625 PF00698 Acyl transferase domain FY145_02625 PF16197 Ketoacyl-synthetase C-terminal extension FY145_02625 PF00109 Beta-ketoacyl synthase, N-terminal domain FY145_02625 PF02801 Beta-ketoacyl synthase, C-terminal domain FY145_02625 PF08240 Alcohol dehydrogenase GroES-like domain FY145_02625 PF08659 KR domain FY145_02630 PF00563 EAL domain FY145_02630 PF01590 GAF domain FY145_02630 PF00990 Diguanylate cyclase, GGDEF domain FY145_02630 PF00989 PAS fold FY145_02640 PF13977 BetI-type transcriptional repressor, C-terminal FY145_02640 PF00440 Bacterial regulatory proteins, tetR family FY145_02645 PF00171 Aldehyde dehydrogenase family FY145_02650 PF00732 GMC oxidoreductase FY145_02650 PF05199 GMC oxidoreductase FY145_02680 PF02798 Glutathione S-transferase, N-terminal domain FY145_02680 PF00043 Glutathione S-transferase, C-terminal domain FY145_02690 PF07690 Major Facilitator Superfamily FY145_02700 PF05973 Phage derived protein Gp49-like (DUF891) FY145_02710 PF04675 DNA ligase N terminus FY145_02710 PF01068 ATP dependent DNA ligase domain FY145_02710 PF04679 ATP dependent DNA ligase C terminal region FY145_02720 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY145_02725 PF00403 Heavy-metal-associated domain FY145_02730 PF17969 L,D-transpeptidase C-terminal domain FY145_02730 PF03734 L,D-transpeptidase catalytic domain FY145_02735 PF17969 L,D-transpeptidase C-terminal domain FY145_02735 PF03734 L,D-transpeptidase catalytic domain FY145_02740 PF01047 MarR family FY145_02745 PF02566 OsmC-like protein FY145_02760 PF12848 ABC transporter FY145_02760 PF00005 ABC transporter FY145_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_02790 PF03466 LysR substrate binding domain FY145_02795 PF00106 short chain dehydrogenase FY145_02810 PF05872 Bacterial protein of unknown function (DUF853) FY145_02820 PF01638 HxlR-like helix-turn-helix FY145_02825 PF00106 short chain dehydrogenase FY145_02830 PF12833 Helix-turn-helix domain FY145_02840 PF00248 Aldo/keto reductase family FY145_02845 PF01062 Bestrophin, RFP-TM, chloride channel FY145_02850 PF08279 HTH domain FY145_02850 PF13280 WYL domain FY145_02865 PF01063 Amino-transferase class IV FY145_02870 PF00672 HAMP domain FY145_02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_02875 PF03466 LysR substrate binding domain FY145_02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_02890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY145_02890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY145_02905 PF01810 LysE type translocator FY145_02910 PF01322 Cytochrome C' FY145_02915 PF00034 Cytochrome c FY145_02945 PF00561 alpha/beta hydrolase fold FY145_02950 PF00376 MerR family regulatory protein FY145_02950 PF09278 MerR, DNA binding FY145_02960 PF02583 Metal-sensitive transcriptional repressor FY145_02975 PF00005 ABC transporter FY145_02975 PF00571 CBS domain FY145_02980 PF00528 Binding-protein-dependent transport system inner membrane component FY145_02990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY145_02990 PF00326 Prolyl oligopeptidase family FY145_03000 PF00701 Dihydrodipicolinate synthetase family FY145_03010 PF02805 Metal binding domain of Ada FY145_03010 PF12833 Helix-turn-helix domain FY145_03010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY145_03010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY145_03015 PF01594 AI-2E family transporter FY145_03020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_03040 PF03006 Haemolysin-III related FY145_03050 PF01810 LysE type translocator FY145_03055 PF01641 SelR domain FY145_03060 PF13244 Domain of unknown function (DUF4040) FY145_03060 PF00361 Proton-conducting membrane transporter FY145_03060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY145_03065 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY145_03070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY145_03075 PF00361 Proton-conducting membrane transporter FY145_03080 PF01899 Na+/H+ ion antiporter subunit FY145_03085 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY145_03090 PF03334 Na+/H+ antiporter subunit FY145_03095 PF05443 ROS/MUCR transcriptional regulator protein FY145_03110 PF02657 Fe-S metabolism associated domain FY145_03115 PF17264 Family of unknown function (DUF5330) FY145_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_03120 PF00512 His Kinase A (phospho-acceptor) domain FY145_03155 PF01810 LysE type translocator FY145_03160 PF03466 LysR substrate binding domain FY145_03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_03165 PF00912 Transglycosylase FY145_03165 PF00905 Penicillin binding protein transpeptidase domain FY145_03170 PF03692 Putative zinc- or iron-chelating domain FY145_03175 PF00905 Penicillin binding protein transpeptidase domain FY145_03185 PF00403 Heavy-metal-associated domain FY145_03190 PF09278 MerR, DNA binding FY145_03190 PF00376 MerR family regulatory protein FY145_03215 PF07690 Major Facilitator Superfamily FY145_03220 PF08244 Glycosyl hydrolases family 32 C terminal FY145_03220 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY145_03225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY145_03235 PF01037 Lrp/AsnC ligand binding domain FY145_03235 PF13404 AsnC-type helix-turn-helix domain FY145_03275 PF04860 Phage portal protein FY145_03365 PF00486 Transcriptional regulatory protein, C terminal FY145_03365 PF00072 Response regulator receiver domain FY145_03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_03385 PF03100 CcmE FY145_03390 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY145_03390 PF01578 Cytochrome C assembly protein FY145_03395 PF03918 Cytochrome C biogenesis protein FY145_03400 PF13180 PDZ domain FY145_03405 PF00072 Response regulator receiver domain FY145_03405 PF00486 Transcriptional regulatory protein, C terminal FY145_03410 PF00672 HAMP domain FY145_03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_03410 PF00512 His Kinase A (phospho-acceptor) domain FY145_03415 PF04134 Protein of unknown function, DUF393 FY145_03420 PF06629 MltA-interacting protein MipA FY145_03425 PF08335 GlnD PII-uridylyltransferase FY145_03425 PF03710 Glutamate-ammonia ligase adenylyltransferase FY145_03430 PF00989 PAS fold FY145_03430 PF00512 His Kinase A (phospho-acceptor) domain FY145_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_03440 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY145_03440 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY145_03440 PF01433 Peptidase family M1 domain FY145_03445 PF00892 EamA-like transporter family FY145_03460 PF00012 Hsp70 protein FY145_03465 PF00990 Diguanylate cyclase, GGDEF domain FY145_03495 PF00107 Zinc-binding dehydrogenase FY145_03495 PF08240 Alcohol dehydrogenase GroES-like domain FY145_03500 PF01638 HxlR-like helix-turn-helix FY145_03505 PF02673 Bacitracin resistance protein BacA FY145_03510 PF03448 MgtE intracellular N domain FY145_03510 PF01769 Divalent cation transporter FY145_03510 PF00571 CBS domain FY145_03515 PF07690 Major Facilitator Superfamily FY145_03520 PF00781 Diacylglycerol kinase catalytic domain FY145_03525 PF00202 Aminotransferase class-III FY145_03540 PF01048 Phosphorylase superfamily FY145_03540 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY145_03565 PF00155 Aminotransferase class I and II FY145_03575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_03575 PF14759 Reductase C-terminal FY145_03580 PF03328 HpcH/HpaI aldolase/citrate lyase family FY145_03595 PF02530 Porin subfamily FY145_03600 PF02530 Porin subfamily FY145_03605 PF01464 Transglycosylase SLT domain FY145_03605 PF14718 Soluble lytic murein transglycosylase L domain FY145_03610 PF00701 Dihydrodipicolinate synthetase family FY145_03615 PF01668 SmpB protein FY145_03620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_03630 PF01192 RNA polymerase Rpb6 FY145_03635 PF13291 ACT domain FY145_03635 PF04607 Region found in RelA / SpoT proteins FY145_03635 PF02824 TGS domain FY145_03650 PF01648 4'-phosphopantetheinyl transferase superfamily FY145_03655 PF10502 Signal peptidase, peptidase S26 FY145_03660 PF14622 Ribonuclease-III-like FY145_03660 PF00035 Double-stranded RNA binding motif FY145_03665 PF07650 KH domain FY145_03665 PF01926 50S ribosome-binding GTPase FY145_03675 PF00072 Response regulator receiver domain FY145_03680 PF02565 Recombination protein O C terminal FY145_03680 PF11967 Recombination protein O N terminal FY145_03685 PF07690 Major Facilitator Superfamily FY145_03690 PF08241 Methyltransferase domain FY145_03700 PF01966 HD domain FY145_03710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_03720 PF00005 ABC transporter FY145_03725 PF00528 Binding-protein-dependent transport system inner membrane component FY145_03730 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY145_03735 PF00924 Mechanosensitive ion channel FY145_03735 PF05552 Conserved TM helix FY145_03745 PF01966 HD domain FY145_03750 PF01571 Aminomethyltransferase folate-binding domain FY145_03770 PF00293 NUDIX domain FY145_03775 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY145_03785 PF00990 Diguanylate cyclase, GGDEF domain FY145_03785 PF00072 Response regulator receiver domain FY145_03790 PF01066 CDP-alcohol phosphatidyltransferase FY145_03795 PF02666 Phosphatidylserine decarboxylase FY145_03800 PF00664 ABC transporter transmembrane region FY145_03800 PF00005 ABC transporter FY145_03810 PF03641 Possible lysine decarboxylase FY145_03815 PF00905 Penicillin binding protein transpeptidase domain FY145_03815 PF03717 Penicillin-binding Protein dimerisation domain FY145_03820 PF00892 EamA-like transporter family FY145_03825 PF00561 alpha/beta hydrolase fold FY145_03840 PF04480 Protein of unknown function (DUF559) FY145_03845 PF09190 DALR domain FY145_03845 PF01406 tRNA synthetases class I (C) catalytic domain FY145_03850 PF00106 short chain dehydrogenase FY145_03855 PF00156 Phosphoribosyl transferase domain FY145_03855 PF13537 Glutamine amidotransferase domain FY145_03860 PF02674 Colicin V production protein FY145_03865 PF06745 KaiC FY145_03865 PF18073 Rubredoxin metal binding domain FY145_03875 PF01168 Alanine racemase, N-terminal domain FY145_03875 PF00842 Alanine racemase, C-terminal domain FY145_03880 PF12833 Helix-turn-helix domain FY145_03880 PF12852 Cupin FY145_03885 PF03591 AzlC protein FY145_03895 PF00772 DnaB-like helicase N terminal domain FY145_03895 PF03796 DnaB-like helicase C terminal domain FY145_03910 PF13533 Biotin-lipoyl like FY145_03915 PF03948 Ribosomal protein L9, C-terminal domain FY145_03915 PF01281 Ribosomal protein L9, N-terminal domain FY145_03925 PF01084 Ribosomal protein S18 FY145_03930 PF01250 Ribosomal protein S6 FY145_03940 PF00248 Aldo/keto reductase family FY145_03945 PF00698 Acyl transferase domain FY145_03955 PF00550 Phosphopantetheine attachment site FY145_03960 PF00109 Beta-ketoacyl synthase, N-terminal domain FY145_03960 PF02801 Beta-ketoacyl synthase, C-terminal domain FY145_03970 PF02618 YceG-like family FY145_03975 PF08340 Domain of unknown function (DUF1732) FY145_03975 PF03755 YicC-like family, N-terminal region FY145_03980 PF00625 Guanylate kinase FY145_03995 PF00398 Ribosomal RNA adenine dimethylase FY145_04000 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY145_04010 PF04453 LPS transport system D FY145_04010 PF03968 OstA-like protein FY145_04025 PF00883 Cytosol aminopeptidase family, catalytic domain FY145_04025 PF02789 Cytosol aminopeptidase family, N-terminal domain FY145_04035 PF03707 Bacterial signalling protein N terminal repeat FY145_04035 PF00990 Diguanylate cyclase, GGDEF domain FY145_04035 PF00563 EAL domain FY145_04040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_04045 PF00563 EAL domain FY145_04045 PF01590 GAF domain FY145_04045 PF00990 Diguanylate cyclase, GGDEF domain FY145_04045 PF00360 Phytochrome region FY145_04050 PF00563 EAL domain FY145_04050 PF00990 Diguanylate cyclase, GGDEF domain FY145_04050 PF03707 Bacterial signalling protein N terminal repeat FY145_04055 PF00989 PAS fold FY145_04055 PF00512 His Kinase A (phospho-acceptor) domain FY145_04055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_04060 PF00196 Bacterial regulatory proteins, luxR family FY145_04060 PF00072 Response regulator receiver domain FY145_04070 PF00005 ABC transporter FY145_04070 PF12848 ABC transporter FY145_04075 PF00990 Diguanylate cyclase, GGDEF domain FY145_04075 PF17158 Membrane-associated sensor, integral membrane domain FY145_04080 PF13417 Glutathione S-transferase, N-terminal domain FY145_04085 PF00334 Nucleoside diphosphate kinase FY145_04105 PF02391 MoaE protein FY145_04115 PF01066 CDP-alcohol phosphatidyltransferase FY145_04120 PF01541 GIY-YIG catalytic domain FY145_04120 PF02151 UvrB/uvrC motif FY145_04120 PF08459 UvrC Helix-hairpin-helix N-terminal FY145_04130 PF13505 Outer membrane protein beta-barrel domain FY145_04140 PF00445 Ribonuclease T2 family FY145_04150 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY145_04155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY145_04155 PF00384 Molybdopterin oxidoreductase FY145_04155 PF01568 Molydopterin dinucleotide binding domain FY145_04160 PF00293 NUDIX domain FY145_04170 PF00551 Formyl transferase FY145_04175 PF00586 AIR synthase related protein, N-terminal domain FY145_04175 PF02769 AIR synthase related protein, C-terminal domain FY145_04180 PF01209 ubiE/COQ5 methyltransferase family FY145_04185 PF01594 AI-2E family transporter FY145_04195 PF02503 Polyphosphate kinase middle domain FY145_04195 PF13090 Polyphosphate kinase C-terminal domain 2 FY145_04195 PF17941 Polyphosphate kinase C-terminal domain 1 FY145_04195 PF13089 Polyphosphate kinase N-terminal domain FY145_04200 PF02541 Ppx/GppA phosphatase family FY145_04205 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_04225 PF00211 Adenylate and Guanylate cyclase catalytic domain FY145_04235 PF01612 3'-5' exonuclease FY145_04235 PF00570 HRDC domain FY145_04240 PF07690 Major Facilitator Superfamily FY145_04245 PF02938 GAD domain FY145_04245 PF00152 tRNA synthetases class II (D, K and N) FY145_04245 PF01336 OB-fold nucleic acid binding domain FY145_04255 PF00672 HAMP domain FY145_04255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_04260 PF00916 Sulfate permease family FY145_04260 PF01740 STAS domain FY145_04270 PF03989 DNA gyrase C-terminal domain, beta-propeller FY145_04270 PF00521 DNA gyrase/topoisomerase IV, subunit A FY145_04275 PF04376 Arginine-tRNA-protein transferase, N terminus FY145_04275 PF04377 Arginine-tRNA-protein transferase, C terminus FY145_04285 PF00490 Delta-aminolevulinic acid dehydratase FY145_04305 PF00464 Serine hydroxymethyltransferase FY145_04310 PF03477 ATP cone domain FY145_04315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY145_04315 PF01872 RibD C-terminal domain FY145_04320 PF00677 Lumazine binding domain FY145_04325 PF01810 LysE type translocator FY145_04330 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY145_04335 PF01029 NusB family FY145_04340 PF07690 Major Facilitator Superfamily FY145_04345 PF03030 Inorganic H+ pyrophosphatase FY145_04365 PF02504 Fatty acid synthesis protein FY145_04370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY145_04370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY145_04375 PF00216 Bacterial DNA-binding protein FY145_04380 PF13411 MerR HTH family regulatory protein FY145_04395 PF00403 Heavy-metal-associated domain FY145_04400 PF00970 Oxidoreductase FAD-binding domain FY145_04400 PF00111 2Fe-2S iron-sulfur cluster binding domain FY145_04400 PF00175 Oxidoreductase NAD-binding domain FY145_04405 PF00376 MerR family regulatory protein FY145_04405 PF09278 MerR, DNA binding FY145_04410 PF00528 Binding-protein-dependent transport system inner membrane component FY145_04415 PF00528 Binding-protein-dependent transport system inner membrane component FY145_04415 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_04420 PF00005 ABC transporter FY145_04420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_04425 PF00005 ABC transporter FY145_04425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_04430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_04440 PF02386 Cation transport protein FY145_04445 PF00585 C-terminal regulatory domain of Threonine dehydratase FY145_04445 PF00291 Pyridoxal-phosphate dependent enzyme FY145_04455 PF00990 Diguanylate cyclase, GGDEF domain FY145_04460 PF02525 Flavodoxin-like fold FY145_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_04465 PF03466 LysR substrate binding domain FY145_04470 PF02872 5'-nucleotidase, C-terminal domain FY145_04470 PF00149 Calcineurin-like phosphoesterase FY145_04490 PF00581 Rhodanese-like domain FY145_04495 PF02272 DHHA1 domain FY145_04495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY145_04495 PF01411 tRNA synthetases class II (A) FY145_04500 PF00291 Pyridoxal-phosphate dependent enzyme FY145_04500 PF00571 CBS domain FY145_04505 PF00875 DNA photolyase FY145_04505 PF03441 FAD binding domain of DNA photolyase FY145_04515 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY145_04515 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY145_04545 PF06055 Exopolysaccharide synthesis, ExoD FY145_04550 PF09335 SNARE associated Golgi protein FY145_04595 PF02397 Bacterial sugar transferase FY145_04600 PF00534 Glycosyl transferases group 1 FY145_04625 PF02628 Cytochrome oxidase assembly protein FY145_04630 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY145_04635 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY145_04640 PF00491 Arginase family FY145_04645 PF00380 Ribosomal protein S9/S16 FY145_04650 PF00572 Ribosomal protein L13 FY145_04660 PF13380 CoA binding domain FY145_04665 PF01053 Cys/Met metabolism PLP-dependent enzyme FY145_04690 PF00067 Cytochrome P450 FY145_04695 PF00990 Diguanylate cyclase, GGDEF domain FY145_04700 PF00574 Clp protease FY145_04705 PF07724 AAA domain (Cdc48 subfamily) FY145_04705 PF10431 C-terminal, D2-small domain, of ClpB protein FY145_04705 PF06689 ClpX C4-type zinc finger FY145_04710 PF00004 ATPase family associated with various cellular activities (AAA) FY145_04710 PF05362 Lon protease (S16) C-terminal proteolytic domain FY145_04710 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY145_04715 PF00216 Bacterial DNA-binding protein FY145_04720 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY145_04745 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY145_04750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY145_04755 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY145_04765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY145_04780 PF10531 SLBB domain FY145_04780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY145_04780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY145_04785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY145_04785 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY145_04785 PF00384 Molybdopterin oxidoreductase FY145_04790 PF00146 NADH dehydrogenase FY145_04795 PF12838 4Fe-4S dicluster domain FY145_04800 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY145_04805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY145_04810 PF00361 Proton-conducting membrane transporter FY145_04810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY145_04815 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY145_04815 PF00361 Proton-conducting membrane transporter FY145_04820 PF00361 Proton-conducting membrane transporter FY145_04825 PF08279 HTH domain FY145_04825 PF03099 Biotin/lipoate A/B protein ligase family FY145_04825 PF02237 Biotin protein ligase C terminal domain FY145_04830 PF17770 Ribonuclease J C-terminal domain FY145_04830 PF12706 Beta-lactamase superfamily domain FY145_04830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY145_04840 PF03129 Anticodon binding domain FY145_04840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY145_04845 PF02687 FtsX-like permease family FY145_04845 PF12704 MacB-like periplasmic core domain FY145_04850 PF00005 ABC transporter FY145_04855 PF02811 PHP domain FY145_04855 PF14579 Helix-hairpin-helix motif FY145_04855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY145_04855 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY145_04865 PF00817 impB/mucB/samB family FY145_04865 PF11799 impB/mucB/samB family C-terminal domain FY145_04885 PF00072 Response regulator receiver domain FY145_04890 PF00990 Diguanylate cyclase, GGDEF domain FY145_04890 PF00072 Response regulator receiver domain FY145_04895 PF00471 Ribosomal protein L33 FY145_04900 PF07690 Major Facilitator Superfamily FY145_04915 PF08206 Ribonuclease B OB domain FY145_04915 PF08461 Ribonuclease R winged-helix domain FY145_04915 PF17876 Cold shock domain FY145_04915 PF00773 RNB domain FY145_04915 PF00575 S1 RNA binding domain FY145_04920 PF01131 DNA topoisomerase FY145_04920 PF01751 Toprim domain FY145_04920 PF13368 Topoisomerase C-terminal repeat FY145_04920 PF01396 Topoisomerase DNA binding C4 zinc finger FY145_04930 PF17782 DprA winged helix domain FY145_04930 PF02481 DNA recombination-mediator protein A FY145_04935 PF02660 Glycerol-3-phosphate acyltransferase FY145_04940 PF01979 Amidohydrolase family FY145_04945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY145_04945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY145_04960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_04960 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_04960 PF18158 Adaptive response protein AidB N-terminal domain FY145_04965 PF00583 Acetyltransferase (GNAT) family FY145_04985 PF03652 Holliday junction resolvase FY145_04990 PF03831 PhnA domain FY145_04990 PF08274 PhnA Zinc-Ribbon FY145_05000 PF02686 Glu-tRNAGln amidotransferase C subunit FY145_05005 PF01425 Amidase FY145_05010 PF00583 Acetyltransferase (GNAT) family FY145_05010 PF13673 Acetyltransferase (GNAT) domain FY145_05015 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY145_05030 PF02934 GatB/GatE catalytic domain FY145_05030 PF02637 GatB domain FY145_05060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY145_05065 PF02785 Biotin carboxylase C-terminal domain FY145_05065 PF00289 Biotin carboxylase, N-terminal domain FY145_05065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_05070 PF00364 Biotin-requiring enzyme FY145_05075 PF01220 Dehydroquinase class II FY145_05085 PF00155 Aminotransferase class I and II FY145_05110 PF12111 Polyribonucleotide phosphorylase C terminal FY145_05110 PF10150 Ribonuclease E/G family FY145_05110 PF00575 S1 RNA binding domain FY145_05115 PF01520 N-acetylmuramoyl-L-alanine amidase FY145_05120 PF17092 Penicillin-binding protein OB-like domain FY145_05120 PF00912 Transglycosylase FY145_05120 PF00905 Penicillin binding protein transpeptidase domain FY145_05140 PF01513 ATP-NAD kinase FY145_05145 PF02567 Phenazine biosynthesis-like protein FY145_05150 PF00009 Elongation factor Tu GTP binding domain FY145_05150 PF03764 Elongation factor G, domain IV FY145_05150 PF00679 Elongation factor G C-terminus FY145_05165 PF00111 2Fe-2S iron-sulfur cluster binding domain FY145_05175 PF00809 Pterin binding enzyme FY145_05180 PF02152 Dihydroneopterin aldolase FY145_05185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY145_05195 PF05128 Domain of unknown function (DUF697) FY145_05200 PF04317 YcjX-like family, DUF463 FY145_05210 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY145_05225 PF00072 Response regulator receiver domain FY145_05225 PF13188 PAS domain FY145_05225 PF08448 PAS fold FY145_05225 PF00512 His Kinase A (phospho-acceptor) domain FY145_05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_05230 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY145_05235 PF00004 ATPase family associated with various cellular activities (AAA) FY145_05235 PF07724 AAA domain (Cdc48 subfamily) FY145_05235 PF17871 AAA lid domain FY145_05235 PF02861 Clp amino terminal domain, pathogenicity island component FY145_05235 PF10431 C-terminal, D2-small domain, of ClpB protein FY145_05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_05255 PF03466 LysR substrate binding domain FY145_05265 PF01230 HIT domain FY145_05290 PF00318 Ribosomal protein S2 FY145_05295 PF00889 Elongation factor TS FY145_05300 PF00696 Amino acid kinase family FY145_05305 PF01765 Ribosome recycling factor FY145_05310 PF01255 Putative undecaprenyl diphosphate synthase FY145_05320 PF17820 PDZ domain FY145_05320 PF02163 Peptidase family M50 FY145_05325 PF01103 Surface antigen FY145_05325 PF07244 Surface antigen variable number repeat FY145_05330 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_05330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY145_05335 PF07977 FabA-like domain FY145_05340 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_05340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY145_05345 PF06230 LpxI C-terminal domain FY145_05345 PF17930 LpxI N-terminal domain FY145_05350 PF02684 Lipid-A-disaccharide synthetase FY145_05355 PF07729 FCD domain FY145_05355 PF00392 Bacterial regulatory proteins, gntR family FY145_05360 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_05365 PF00528 Binding-protein-dependent transport system inner membrane component FY145_05370 PF00528 Binding-protein-dependent transport system inner membrane component FY145_05375 PF00005 ABC transporter FY145_05380 PF00285 Citrate synthase, C-terminal domain FY145_05395 PF01726 LexA DNA binding domain FY145_05395 PF00717 Peptidase S24-like FY145_05420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FY145_05420 PF00437 Type II/IV secretion system protein FY145_05425 PF00482 Type II secretion system (T2SS), protein F FY145_05445 PF07963 Prokaryotic N-terminal methylation motif FY145_05445 PF08334 Type II secretion system (T2SS), protein G FY145_05455 PF03958 Bacterial type II/III secretion system short domain FY145_05455 PF00263 Bacterial type II and III secretion system protein FY145_05480 PF00793 DAHP synthetase I family FY145_05485 PF00113 Enolase, C-terminal TIM barrel domain FY145_05485 PF03952 Enolase, N-terminal domain FY145_05495 PF00676 Dehydrogenase E1 component FY145_05500 PF00364 Biotin-requiring enzyme FY145_05500 PF02779 Transketolase, pyrimidine binding domain FY145_05500 PF02780 Transketolase, C-terminal domain FY145_05505 PF00364 Biotin-requiring enzyme FY145_05505 PF02817 e3 binding domain FY145_05505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY145_05515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY145_05515 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_05525 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY145_05525 PF04055 Radical SAM superfamily FY145_05530 PF00892 EamA-like transporter family FY145_05545 PF03364 Polyketide cyclase / dehydrase and lipid transport FY145_05550 PF02464 Competence-damaged protein FY145_05555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY145_05555 PF02542 YgbB family FY145_05560 PF01207 Dihydrouridine synthase (Dus) FY145_05565 PF00512 His Kinase A (phospho-acceptor) domain FY145_05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_05565 PF00989 PAS fold FY145_05570 PF02954 Bacterial regulatory protein, Fis family FY145_05570 PF00072 Response regulator receiver domain FY145_05570 PF00158 Sigma-54 interaction domain FY145_05575 PF00989 PAS fold FY145_05575 PF00512 His Kinase A (phospho-acceptor) domain FY145_05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_05575 PF00672 HAMP domain FY145_05580 PF00072 Response regulator receiver domain FY145_05580 PF02954 Bacterial regulatory protein, Fis family FY145_05580 PF00158 Sigma-54 interaction domain FY145_05585 PF02080 TrkA-C domain FY145_05585 PF02254 TrkA-N domain FY145_05590 PF17209 Hfq protein FY145_05595 PF16360 GTP-binding GTPase Middle Region FY145_05595 PF13167 GTP-binding GTPase N-terminal FY145_05595 PF01926 50S ribosome-binding GTPase FY145_05600 PF03819 MazG nucleotide pyrophosphohydrolase domain FY145_05610 PF10414 Sirohaem synthase dimerisation region FY145_05610 PF14824 Sirohaem biosynthesis protein central FY145_05610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_05630 PF00175 Oxidoreductase NAD-binding domain FY145_05630 PF00970 Oxidoreductase FAD-binding domain FY145_05650 PF02347 Glycine cleavage system P-protein FY145_05655 PF01597 Glycine cleavage H-protein FY145_05660 PF01571 Aminomethyltransferase folate-binding domain FY145_05660 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY145_05685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY145_05690 PF00849 RNA pseudouridylate synthase FY145_05690 PF01479 S4 domain FY145_05695 PF13419 Haloacid dehalogenase-like hydrolase FY145_05710 PF01042 Endoribonuclease L-PSP FY145_05715 PF00756 Putative esterase FY145_05725 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY145_05740 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY145_05740 PF00578 AhpC/TSA family FY145_05745 PF02798 Glutathione S-transferase, N-terminal domain FY145_05745 PF00043 Glutathione S-transferase, C-terminal domain FY145_05760 PF03358 NADPH-dependent FMN reductase FY145_05765 PF03960 ArsC family FY145_05770 PF01758 Sodium Bile acid symporter family FY145_05775 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY145_05785 PF00654 Voltage gated chloride channel FY145_05790 PF03099 Biotin/lipoate A/B protein ligase family FY145_05790 PF12706 Beta-lactamase superfamily domain FY145_05795 PF01026 TatD related DNase FY145_05800 PF08264 Anticodon-binding domain of tRNA FY145_05800 PF09334 tRNA synthetases class I (M) FY145_05805 PF09115 DNA polymerase III, delta subunit, C terminal FY145_05810 PF02223 Thymidylate kinase FY145_05815 PF07943 Penicillin-binding protein 5, C-terminal domain FY145_05815 PF00768 D-alanyl-D-alanine carboxypeptidase FY145_05820 PF03330 Lytic transglycolase FY145_05820 PF05036 Sporulation related domain FY145_05860 PF03989 DNA gyrase C-terminal domain, beta-propeller FY145_05860 PF00521 DNA gyrase/topoisomerase IV, subunit A FY145_05865 PF01914 MarC family integral membrane protein FY145_05870 PF00571 CBS domain FY145_05870 PF01743 Poly A polymerase head domain FY145_05880 PF00436 Single-strand binding protein family FY145_05885 PF17755 UvrA DNA-binding domain FY145_05885 PF17760 UvrA interaction domain FY145_05895 PF01207 Dihydrouridine synthase (Dus) FY145_05900 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY145_05905 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_05915 PF00950 ABC 3 transport family FY145_05920 PF00005 ABC transporter FY145_05925 PF01297 Zinc-uptake complex component A periplasmic FY145_05930 PF00356 Bacterial regulatory proteins, lacI family FY145_05940 PF00248 Aldo/keto reductase family FY145_05950 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY145_05950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY145_05955 PF03597 Cytochrome oxidase maturation protein cbb3-type FY145_05965 PF05751 FixH FY145_05970 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY145_05970 PF13746 4Fe-4S dicluster domain FY145_05970 PF12801 4Fe-4S binding domain FY145_05990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY145_05990 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY145_06005 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY145_06010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY145_06030 PF00376 MerR family regulatory protein FY145_06030 PF09278 MerR, DNA binding FY145_06035 PF00571 CBS domain FY145_06035 PF01769 Divalent cation transporter FY145_06035 PF03448 MgtE intracellular N domain FY145_06040 PF00384 Molybdopterin oxidoreductase FY145_06050 PF01327 Polypeptide deformylase FY145_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_06060 PF00512 His Kinase A (phospho-acceptor) domain FY145_06060 PF00989 PAS fold FY145_06070 PF03099 Biotin/lipoate A/B protein ligase family FY145_06075 PF08240 Alcohol dehydrogenase GroES-like domain FY145_06075 PF00107 Zinc-binding dehydrogenase FY145_06100 PF07549 SecD/SecF GG Motif FY145_06100 PF02355 Protein export membrane protein FY145_06105 PF02699 Preprotein translocase subunit FY145_06115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY145_06115 PF08240 Alcohol dehydrogenase GroES-like domain FY145_06120 PF08360 QacR-like protein, C-terminal region FY145_06120 PF00440 Bacterial regulatory proteins, tetR family FY145_06125 PF00067 Cytochrome P450 FY145_06135 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_06135 PF06426 Serine acetyltransferase, N-terminal FY145_06140 PF00561 alpha/beta hydrolase fold FY145_06150 PF01494 FAD binding domain FY145_06155 PF01053 Cys/Met metabolism PLP-dependent enzyme FY145_06160 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_06165 PF00528 Binding-protein-dependent transport system inner membrane component FY145_06170 PF00528 Binding-protein-dependent transport system inner membrane component FY145_06175 PF00005 ABC transporter FY145_06190 PF01368 DHH family FY145_06190 PF02272 DHHA1 domain FY145_06190 PF17768 RecJ OB domain FY145_06200 PF01842 ACT domain FY145_06200 PF00742 Homoserine dehydrogenase FY145_06200 PF03447 Homoserine dehydrogenase, NAD binding domain FY145_06205 PF00155 Aminotransferase class I and II FY145_06210 PF01156 Inosine-uridine preferring nucleoside hydrolase FY145_06215 PF01925 Sulfite exporter TauE/SafE FY145_06230 PF08240 Alcohol dehydrogenase GroES-like domain FY145_06230 PF00107 Zinc-binding dehydrogenase FY145_06235 PF00109 Beta-ketoacyl synthase, N-terminal domain FY145_06235 PF02801 Beta-ketoacyl synthase, C-terminal domain FY145_06245 PF07977 FabA-like domain FY145_06250 PF00550 Phosphopantetheine attachment site FY145_06255 PF04055 Radical SAM superfamily FY145_06260 PF00027 Cyclic nucleotide-binding domain FY145_06260 PF13545 Crp-like helix-turn-helix domain FY145_06270 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY145_06275 PF03749 Sugar fermentation stimulation protein RE domain FY145_06275 PF17746 SfsA N-terminal OB domain FY145_06280 PF00557 Metallopeptidase family M24 FY145_06285 PF04002 RadC-like JAB domain FY145_06300 PF01474 Class-II DAHP synthetase family FY145_06315 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_06315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY145_06325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY145_06330 PF13419 Haloacid dehalogenase-like hydrolase FY145_06340 PF10415 Fumarase C C-terminus FY145_06340 PF00206 Lyase FY145_06350 PF00117 Glutamine amidotransferase class-I FY145_06350 PF06418 CTP synthase N-terminus FY145_06355 PF03840 Preprotein translocase SecG subunit FY145_06360 PF00121 Triosephosphate isomerase FY145_06370 PF01751 Toprim domain FY145_06370 PF00204 DNA gyrase B FY145_06370 PF00986 DNA gyrase B subunit, carboxyl terminus FY145_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_06375 PF01370 NAD dependent epimerase/dehydratase family FY145_06380 PF00574 Clp protease FY145_06390 PF01022 Bacterial regulatory protein, arsR family FY145_06395 PF13091 PLD-like domain FY145_06400 PF00072 Response regulator receiver domain FY145_06405 PF01571 Aminomethyltransferase folate-binding domain FY145_06405 PF16350 FAD dependent oxidoreductase central domain FY145_06405 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY145_06405 PF01266 FAD dependent oxidoreductase FY145_06415 PF00924 Mechanosensitive ion channel FY145_06415 PF12795 Mechanosensitive ion channel porin domain FY145_06415 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY145_06480 PF00005 ABC transporter FY145_06485 PF02405 Permease MlaE FY145_06490 PF13378 Enolase C-terminal domain-like FY145_06490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_06500 PF01515 Phosphate acetyl/butaryl transferase FY145_06500 PF03949 Malic enzyme, NAD binding domain FY145_06500 PF00390 Malic enzyme, N-terminal domain FY145_06510 PF00881 Nitroreductase family FY145_06515 PF07676 WD40-like Beta Propeller Repeat FY145_06525 PF00795 Carbon-nitrogen hydrolase FY145_06525 PF02540 NAD synthase FY145_06530 PF00884 Sulfatase FY145_06540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY145_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_06555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY145_06555 PF05697 Bacterial trigger factor protein (TF) FY145_06555 PF05698 Bacterial trigger factor protein (TF) C-terminus FY145_06575 PF01134 Glucose inhibited division protein A FY145_06595 PF00107 Zinc-binding dehydrogenase FY145_06595 PF08240 Alcohol dehydrogenase GroES-like domain FY145_06605 PF00550 Phosphopantetheine attachment site FY145_06610 PF00501 AMP-binding enzyme FY145_06610 PF13193 AMP-binding enzyme C-terminal domain FY145_06620 PF00117 Glutamine amidotransferase class-I FY145_06620 PF00425 chorismate binding enzyme FY145_06620 PF04715 Anthranilate synthase component I, N terminal region FY145_06625 PF01702 Queuine tRNA-ribosyltransferase FY145_06630 PF02547 Queuosine biosynthesis protein FY145_06635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY145_06640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY145_06645 PF01467 Cytidylyltransferase-like FY145_06660 PF02885 Glycosyl transferase family, helical bundle domain FY145_06660 PF00591 Glycosyl transferase family, a/b domain FY145_06665 PF00218 Indole-3-glycerol phosphate synthase FY145_06670 PF01967 MoaC family FY145_06675 PF00994 Probable molybdopterin binding domain FY145_06675 PF03454 MoeA C-terminal region (domain IV) FY145_06675 PF03453 MoeA N-terminal region (domain I and II) FY145_06680 PF17158 Membrane-associated sensor, integral membrane domain FY145_06680 PF00990 Diguanylate cyclase, GGDEF domain FY145_06690 PF00999 Sodium/hydrogen exchanger family FY145_06690 PF02254 TrkA-N domain FY145_06700 PF06463 Molybdenum Cofactor Synthesis C FY145_06700 PF04055 Radical SAM superfamily FY145_06710 PF07690 Major Facilitator Superfamily FY145_06715 PF12804 MobA-like NTP transferase domain FY145_06720 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY145_06725 PF01551 Peptidase family M23 FY145_06735 PF01975 Survival protein SurE FY145_06740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY145_06740 PF02403 Seryl-tRNA synthetase N-terminal domain FY145_06745 PF00902 Sec-independent protein translocase protein (TatC) FY145_06750 PF02416 mttA/Hcf106 family FY145_06755 PF02416 mttA/Hcf106 family FY145_06760 PF04079 Segregation and condensation complex subunit ScpB FY145_06765 PF02616 Segregation and condensation protein ScpA FY145_06770 PF00933 Glycosyl hydrolase family 3 N terminal domain FY145_06780 PF03485 Arginyl tRNA synthetase N terminal domain FY145_06780 PF05746 DALR anticodon binding domain FY145_06780 PF00750 tRNA synthetases class I (R) FY145_06785 PF13286 Phosphohydrolase-associated domain FY145_06785 PF01966 HD domain FY145_06790 PF01521 Iron-sulphur cluster biosynthesis FY145_06800 PF08238 Sel1 repeat FY145_06810 PF00133 tRNA synthetases class I (I, L, M and V) FY145_06810 PF08264 Anticodon-binding domain of tRNA FY145_06810 PF10458 Valyl tRNA synthetase tRNA binding arm FY145_06960 PF00565 Staphylococcal nuclease homologue FY145_07035 PF06381 Protein of unknown function (DUF1073) FY145_07085 PF11638 DnaA N-terminal domain FY145_07085 PF08299 Bacterial dnaA protein helix-turn-helix FY145_07085 PF00308 Bacterial dnaA protein FY145_07105 PF00145 C-5 cytosine-specific DNA methylase FY145_07110 PF00772 DnaB-like helicase N terminal domain FY145_07110 PF03796 DnaB-like helicase C terminal domain FY145_07110 PF14528 LAGLIDADG-like domain FY145_07275 PF03358 NADPH-dependent FMN reductase FY145_07280 PF00994 Probable molybdopterin binding domain FY145_07280 PF02464 Competence-damaged protein FY145_07280 PF18146 Damage-inducible protein CinA KH domain FY145_07285 PF00582 Universal stress protein family FY145_07290 PF00156 Phosphoribosyl transferase domain FY145_07295 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY145_07295 PF02867 Ribonucleotide reductase, barrel domain FY145_07310 PF01566 Natural resistance-associated macrophage protein FY145_07320 PF00664 ABC transporter transmembrane region FY145_07320 PF00005 ABC transporter FY145_07325 PF01594 AI-2E family transporter FY145_07330 PF00583 Acetyltransferase (GNAT) family FY145_07360 PF03129 Anticodon binding domain FY145_07360 PF02824 TGS domain FY145_07360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY145_07360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY145_07370 PF01809 Putative membrane protein insertion efficiency factor FY145_07380 PF01227 GTP cyclohydrolase I FY145_07385 PF01502 Phosphoribosyl-AMP cyclohydrolase FY145_07390 PF01734 Patatin-like phospholipase FY145_07400 PF00478 IMP dehydrogenase / GMP reductase domain FY145_07400 PF00571 CBS domain FY145_07435 PF03313 Serine dehydratase alpha chain FY145_07435 PF03315 Serine dehydratase beta chain FY145_07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_07475 PF03466 LysR substrate binding domain FY145_07485 PF12833 Helix-turn-helix domain FY145_07485 PF01965 DJ-1/PfpI family FY145_07490 PF01256 Carbohydrate kinase FY145_07490 PF03853 YjeF-related protein N-terminus FY145_07500 PF00543 Nitrogen regulatory protein P-II FY145_07505 PF00120 Glutamine synthetase, catalytic domain FY145_07505 PF03951 Glutamine synthetase, beta-Grasp domain FY145_07515 PF08755 Hemimethylated DNA-binding protein YccV like FY145_07525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_07535 PF00892 EamA-like transporter family FY145_07545 PF17757 UvrB interaction domain FY145_07545 PF03461 TRCF domain FY145_07545 PF00270 DEAD/DEAH box helicase FY145_07545 PF00271 Helicase conserved C-terminal domain FY145_07545 PF02559 CarD-like/TRCF domain FY145_07555 PF00271 Helicase conserved C-terminal domain FY145_07555 PF00270 DEAD/DEAH box helicase FY145_07555 PF17191 RecG wedge domain FY145_07570 PF01850 PIN domain FY145_07585 PF01380 SIS domain FY145_07595 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_07595 PF14602 Hexapeptide repeat of succinyl-transferase FY145_07595 PF12804 MobA-like NTP transferase domain FY145_07600 PF07729 FCD domain FY145_07600 PF00392 Bacterial regulatory proteins, gntR family FY145_07605 PF02608 ABC transporter substrate-binding protein PnrA-like FY145_07610 PF02653 Branched-chain amino acid transport system / permease component FY145_07615 PF02653 Branched-chain amino acid transport system / permease component FY145_07620 PF00005 ABC transporter FY145_07630 PF01494 FAD binding domain FY145_07635 PF03547 Membrane transport protein FY145_07640 PF02683 Cytochrome C biogenesis protein transmembrane region FY145_07660 PF00313 'Cold-shock' DNA-binding domain FY145_07710 PF00005 ABC transporter FY145_07710 PF12704 MacB-like periplasmic core domain FY145_07710 PF02687 FtsX-like permease family FY145_07715 PF00005 ABC transporter FY145_07715 PF02687 FtsX-like permease family FY145_07715 PF12704 MacB-like periplasmic core domain FY145_07735 PF01521 Iron-sulphur cluster biosynthesis FY145_07740 PF01883 Iron-sulfur cluster assembly protein FY145_07745 PF00266 Aminotransferase class-V FY145_07750 PF01458 Uncharacterized protein family (UPF0051) FY145_07755 PF00005 ABC transporter FY145_07760 PF01458 Uncharacterized protein family (UPF0051) FY145_07765 PF00266 Aminotransferase class-V FY145_07770 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY145_07775 PF03702 Anhydro-N-acetylmuramic acid kinase FY145_07780 PF00579 tRNA synthetases class I (W and Y) FY145_07790 PF00578 AhpC/TSA family FY145_07795 PF04305 Protein of unknown function (DUF455) FY145_07800 PF01476 LysM domain FY145_07800 PF01551 Peptidase family M23 FY145_07800 PF08525 Opacity-associated protein A N-terminal motif FY145_07805 PF00270 DEAD/DEAH box helicase FY145_07805 PF00271 Helicase conserved C-terminal domain FY145_07820 PF00834 Ribulose-phosphate 3 epimerase family FY145_07830 PF10397 Adenylosuccinate lyase C-terminus FY145_07830 PF00206 Lyase FY145_07840 PF01259 SAICAR synthetase FY145_07845 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY145_07865 PF00155 Aminotransferase class I and II FY145_07865 PF00392 Bacterial regulatory proteins, gntR family FY145_07870 PF00586 AIR synthase related protein, N-terminal domain FY145_07870 PF02769 AIR synthase related protein, C-terminal domain FY145_07870 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY145_07890 PF00462 Glutaredoxin FY145_07895 PF07690 Major Facilitator Superfamily FY145_07900 PF00459 Inositol monophosphatase family FY145_07905 PF00459 Inositol monophosphatase family FY145_07910 PF01171 PP-loop family FY145_07915 PF04960 Glutaminase FY145_07920 PF01479 S4 domain FY145_07920 PF00163 Ribosomal protein S4/S9 N-terminal domain FY145_07925 PF03741 Integral membrane protein TerC family FY145_07935 PF00892 EamA-like transporter family FY145_07940 PF01810 LysE type translocator FY145_07950 PF01177 Asp/Glu/Hydantoin racemase FY145_07955 PF00588 SpoU rRNA Methylase family FY145_07965 PF00180 Isocitrate/isopropylmalate dehydrogenase FY145_07975 PF01411 tRNA synthetases class II (A) FY145_07975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY145_07975 PF02272 DHHA1 domain FY145_07980 PF00154 recA bacterial DNA recombination protein FY145_07985 PF00294 pfkB family carbohydrate kinase FY145_07990 PF04227 Indigoidine synthase A like protein FY145_07995 PF01389 OmpA-like transmembrane domain FY145_07995 PF00691 OmpA family FY145_08000 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_08005 PF00528 Binding-protein-dependent transport system inner membrane component FY145_08010 PF00528 Binding-protein-dependent transport system inner membrane component FY145_08015 PF06233 Usg-like family FY145_08020 PF08241 Methyltransferase domain FY145_08025 PF09084 NMT1/THI5 like FY145_08030 PF13404 AsnC-type helix-turn-helix domain FY145_08030 PF01037 Lrp/AsnC ligand binding domain FY145_08035 PF03167 Uracil DNA glycosylase superfamily FY145_08045 PF00989 PAS fold FY145_08045 PF00512 His Kinase A (phospho-acceptor) domain FY145_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_08050 PF01219 Prokaryotic diacylglycerol kinase FY145_08055 PF02277 Phosphoribosyltransferase FY145_08060 PF02654 Cobalamin-5-phosphate synthase FY145_08075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY145_08080 PF01061 ABC-2 type transporter FY145_08085 PF00005 ABC transporter FY145_08090 PF01925 Sulfite exporter TauE/SafE FY145_08100 PF08269 Cache domain FY145_08100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_08110 PF00004 ATPase family associated with various cellular activities (AAA) FY145_08110 PF16193 AAA C-terminal domain FY145_08110 PF12002 MgsA AAA+ ATPase C terminal FY145_08115 PF13180 PDZ domain FY145_08115 PF00595 PDZ domain FY145_08135 PF00920 Dehydratase family FY145_08140 PF00174 Oxidoreductase molybdopterin binding domain FY145_08145 PF01794 Ferric reductase like transmembrane component FY145_08155 PF05675 Protein of unknown function (DUF817) FY145_08160 PF01196 Ribosomal protein L17 FY145_08165 PF01000 RNA polymerase Rpb3/RpoA insert domain FY145_08165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY145_08165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY145_08170 PF00411 Ribosomal protein S11 FY145_08175 PF00416 Ribosomal protein S13/S18 FY145_08185 PF00344 SecY translocase FY145_08190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY145_08195 PF00327 Ribosomal protein L30p/L7e FY145_08200 PF00333 Ribosomal protein S5, N-terminal domain FY145_08200 PF03719 Ribosomal protein S5, C-terminal domain FY145_08205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY145_08210 PF00347 Ribosomal protein L6 FY145_08215 PF00410 Ribosomal protein S8 FY145_08220 PF00253 Ribosomal protein S14p/S29e FY145_08225 PF00281 Ribosomal protein L5 FY145_08225 PF00673 ribosomal L5P family C-terminus FY145_08230 PF00467 KOW motif FY145_08230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY145_08235 PF00238 Ribosomal protein L14p/L23e FY145_08240 PF00366 Ribosomal protein S17 FY145_08245 PF00831 Ribosomal L29 protein FY145_08250 PF00252 Ribosomal protein L16p/L10e FY145_08255 PF07650 KH domain FY145_08255 PF00189 Ribosomal protein S3, C-terminal domain FY145_08260 PF00237 Ribosomal protein L22p/L17e FY145_08265 PF00203 Ribosomal protein S19 FY145_08270 PF00181 Ribosomal Proteins L2, RNA binding domain FY145_08270 PF03947 Ribosomal Proteins L2, C-terminal domain FY145_08275 PF00276 Ribosomal protein L23 FY145_08280 PF00573 Ribosomal protein L4/L1 family FY145_08285 PF00297 Ribosomal protein L3 FY145_08290 PF00338 Ribosomal protein S10p/S20e FY145_08295 PF03143 Elongation factor Tu C-terminal domain FY145_08295 PF00009 Elongation factor Tu GTP binding domain FY145_08295 PF03144 Elongation factor Tu domain 2 FY145_08300 PF00679 Elongation factor G C-terminus FY145_08300 PF14492 Elongation Factor G, domain II FY145_08300 PF03764 Elongation factor G, domain IV FY145_08300 PF00009 Elongation factor Tu GTP binding domain FY145_08300 PF03144 Elongation factor Tu domain 2 FY145_08305 PF00177 Ribosomal protein S7p/S5e FY145_08310 PF00164 Ribosomal protein S12/S23 FY145_08330 PF04997 RNA polymerase Rpb1, domain 1 FY145_08330 PF00623 RNA polymerase Rpb1, domain 2 FY145_08330 PF04983 RNA polymerase Rpb1, domain 3 FY145_08330 PF05000 RNA polymerase Rpb1, domain 4 FY145_08330 PF04998 RNA polymerase Rpb1, domain 5 FY145_08335 PF04560 RNA polymerase Rpb2, domain 7 FY145_08335 PF04563 RNA polymerase beta subunit FY145_08335 PF04561 RNA polymerase Rpb2, domain 2 FY145_08335 PF04565 RNA polymerase Rpb2, domain 3 FY145_08335 PF10385 RNA polymerase beta subunit external 1 domain FY145_08335 PF00562 RNA polymerase Rpb2, domain 6 FY145_08340 PF00542 Ribosomal protein L7/L12 C-terminal domain FY145_08340 PF16320 Ribosomal protein L7/L12 dimerisation domain FY145_08345 PF00466 Ribosomal protein L10 FY145_08350 PF00687 Ribosomal protein L1p/L10e family FY145_08355 PF00298 Ribosomal protein L11, RNA binding domain FY145_08355 PF03946 Ribosomal protein L11, N-terminal domain FY145_08360 PF02357 Transcription termination factor nusG FY145_08360 PF00467 KOW motif FY145_08365 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY145_08375 PF02719 Polysaccharide biosynthesis protein FY145_08375 PF08485 Polysaccharide biosynthesis protein C-terminal FY145_08380 PF00009 Elongation factor Tu GTP binding domain FY145_08380 PF03143 Elongation factor Tu C-terminal domain FY145_08380 PF03144 Elongation factor Tu domain 2 FY145_08385 PF03741 Integral membrane protein TerC family FY145_08390 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY145_08410 PF00664 ABC transporter transmembrane region FY145_08410 PF00005 ABC transporter FY145_08450 PF04545 Sigma-70, region 4 FY145_08450 PF04542 Sigma-70 region 2 FY145_08460 PF00158 Sigma-54 interaction domain FY145_08460 PF00072 Response regulator receiver domain FY145_08460 PF02954 Bacterial regulatory protein, Fis family FY145_08465 PF00072 Response regulator receiver domain FY145_08465 PF08769 Sporulation initiation factor Spo0A C terminal FY145_08470 PF01627 Hpt domain FY145_08470 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_08470 PF00512 His Kinase A (phospho-acceptor) domain FY145_08470 PF00072 Response regulator receiver domain FY145_08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_08475 PF00072 Response regulator receiver domain FY145_08480 PF07536 HWE histidine kinase FY145_08480 PF13426 PAS domain FY145_08480 PF08447 PAS fold FY145_08485 PF00072 Response regulator receiver domain FY145_08490 PF08446 PAS fold FY145_08490 PF00512 His Kinase A (phospho-acceptor) domain FY145_08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_08490 PF01590 GAF domain FY145_08490 PF00360 Phytochrome region FY145_08505 PF00588 SpoU rRNA Methylase family FY145_08505 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY145_08510 PF03061 Thioesterase superfamily FY145_08530 PF13460 NAD(P)H-binding FY145_08535 PF01638 HxlR-like helix-turn-helix FY145_08550 PF04851 Type III restriction enzyme, res subunit FY145_08550 PF00271 Helicase conserved C-terminal domain FY145_08550 PF02151 UvrB/uvrC motif FY145_08550 PF12344 Ultra-violet resistance protein B FY145_08550 PF17757 UvrB interaction domain FY145_08560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY145_08560 PF00756 Putative esterase FY145_08580 PF00684 DnaJ central domain FY145_08580 PF01556 DnaJ C terminal domain FY145_08580 PF00226 DnaJ domain FY145_08600 PF17151 Periplasmic sensor domain FY145_08600 PF00990 Diguanylate cyclase, GGDEF domain FY145_08610 PF08402 TOBE domain FY145_08610 PF00005 ABC transporter FY145_08620 PF01547 Bacterial extracellular solute-binding protein FY145_08625 PF00155 Aminotransferase class I and II FY145_08630 PF05025 RbsD / FucU transport protein family FY145_08640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY145_08640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY145_08645 PF00440 Bacterial regulatory proteins, tetR family FY145_08650 PF12833 Helix-turn-helix domain FY145_08650 PF06719 AraC-type transcriptional regulator N-terminus FY145_08655 PF00107 Zinc-binding dehydrogenase FY145_08655 PF08240 Alcohol dehydrogenase GroES-like domain FY145_08660 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_08665 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY145_08670 PF03472 Autoinducer binding domain FY145_08670 PF00196 Bacterial regulatory proteins, luxR family FY145_08675 PF14490 Helix-hairpin-helix containing domain FY145_08675 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY145_08675 PF13538 UvrD-like helicase C-terminal domain FY145_08695 PF04542 Sigma-70 region 2 FY145_08695 PF08281 Sigma-70, region 4 FY145_08710 PF00248 Aldo/keto reductase family FY145_08725 PF10369 Small subunit of acetolactate synthase FY145_08730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY145_08730 PF00205 Thiamine pyrophosphate enzyme, central domain FY145_08730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY145_08750 PF13302 Acetyltransferase (GNAT) domain FY145_08760 PF13180 PDZ domain FY145_08765 PF01145 SPFH domain / Band 7 family FY145_08770 PF01145 SPFH domain / Band 7 family FY145_08775 PF00186 Dihydrofolate reductase FY145_08780 PF00303 Thymidylate synthase FY145_08815 PF01565 FAD binding domain FY145_08815 PF02913 FAD linked oxidases, C-terminal domain FY145_08820 PF00873 AcrB/AcrD/AcrF family FY145_08825 PF13533 Biotin-lipoyl like FY145_08835 PF13361 UvrD-like helicase C-terminal domain FY145_08835 PF00580 UvrD/REP helicase N-terminal domain FY145_08860 PF00857 Isochorismatase family FY145_08880 PF01321 Creatinase/Prolidase N-terminal domain FY145_08880 PF00557 Metallopeptidase family M24 FY145_08890 PF02630 SCO1/SenC FY145_08900 PF01584 CheW-like domain FY145_08910 PF00929 Exonuclease FY145_08915 PF03466 LysR substrate binding domain FY145_08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_08925 PF00583 Acetyltransferase (GNAT) family FY145_08930 PF01636 Phosphotransferase enzyme family FY145_08935 PF01653 NAD-dependent DNA ligase adenylation domain FY145_08935 PF03120 NAD-dependent DNA ligase OB-fold domain FY145_08935 PF00533 BRCA1 C Terminus (BRCT) domain FY145_08935 PF12826 Helix-hairpin-helix motif FY145_08935 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY145_08940 PF02463 RecF/RecN/SMC N terminal domain FY145_08945 PF13525 Outer membrane lipoprotein FY145_08950 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY145_08955 PF12327 FtsZ family, C-terminal domain FY145_08955 PF00091 Tubulin/FtsZ family, GTPase domain FY145_08960 PF02491 SHS2 domain inserted in FTSA FY145_08965 PF08478 POTRA domain, FtsQ-type FY145_08965 PF03799 Cell division protein FtsQ FY145_08970 PF01820 D-ala D-ala ligase N-terminus FY145_08970 PF07478 D-ala D-ala ligase C-terminus FY145_08975 PF00083 Sugar (and other) transporter FY145_08975 PF07690 Major Facilitator Superfamily FY145_08980 PF00990 Diguanylate cyclase, GGDEF domain FY145_08980 PF00563 EAL domain FY145_08985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY145_08985 PF01565 FAD binding domain FY145_08990 PF01225 Mur ligase family, catalytic domain FY145_08990 PF08245 Mur ligase middle domain FY145_08990 PF02875 Mur ligase family, glutamate ligase domain FY145_08995 PF04101 Glycosyltransferase family 28 C-terminal domain FY145_08995 PF03033 Glycosyltransferase family 28 N-terminal domain FY145_09000 PF01098 Cell cycle protein FY145_09005 PF08245 Mur ligase middle domain FY145_09005 PF02875 Mur ligase family, glutamate ligase domain FY145_09010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY145_09010 PF00953 Glycosyl transferase family 4 FY145_09015 PF08245 Mur ligase middle domain FY145_09015 PF01225 Mur ligase family, catalytic domain FY145_09015 PF02875 Mur ligase family, glutamate ligase domain FY145_09020 PF02875 Mur ligase family, glutamate ligase domain FY145_09020 PF08245 Mur ligase middle domain FY145_09020 PF01225 Mur ligase family, catalytic domain FY145_09025 PF00905 Penicillin binding protein transpeptidase domain FY145_09025 PF03717 Penicillin-binding Protein dimerisation domain FY145_09035 PF01795 MraW methylase family FY145_09040 PF02381 MraZ protein, putative antitoxin-like FY145_09065 PF01510 N-acetylmuramoyl-L-alanine amidase FY145_09070 PF05099 Tellurite resistance protein TerB FY145_09070 PF00226 DnaJ domain FY145_09075 PF00365 Phosphofructokinase FY145_09095 PF13649 Methyltransferase domain FY145_09100 PF01183 Glycosyl hydrolases family 25 FY145_09110 PF02219 Methylenetetrahydrofolate reductase FY145_09115 PF01209 ubiE/COQ5 methyltransferase family FY145_09120 PF00005 ABC transporter FY145_09120 PF12848 ABC transporter FY145_09125 PF12146 Serine aminopeptidase, S33 FY145_09130 PF02515 CoA-transferase family III FY145_09135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY145_09135 PF00205 Thiamine pyrophosphate enzyme, central domain FY145_09135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY145_09145 PF01042 Endoribonuclease L-PSP FY145_09160 PF03734 L,D-transpeptidase catalytic domain FY145_09160 PF01476 LysM domain FY145_09165 PF07690 Major Facilitator Superfamily FY145_09185 PF10609 NUBPL iron-transfer P-loop NTPase FY145_09190 PF00465 Iron-containing alcohol dehydrogenase FY145_09195 PF00171 Aldehyde dehydrogenase family FY145_09200 PF00120 Glutamine synthetase, catalytic domain FY145_09200 PF03951 Glutamine synthetase, beta-Grasp domain FY145_09205 PF13520 Amino acid permease FY145_09215 PF01418 Helix-turn-helix domain, rpiR family FY145_09215 PF01380 SIS domain FY145_09220 PF13416 Bacterial extracellular solute-binding protein FY145_09235 PF00005 ABC transporter FY145_09235 PF08402 TOBE domain FY145_09240 PF08240 Alcohol dehydrogenase GroES-like domain FY145_09240 PF00107 Zinc-binding dehydrogenase FY145_09255 PF07690 Major Facilitator Superfamily FY145_09260 PF00809 Pterin binding enzyme FY145_09260 PF02310 B12 binding domain FY145_09260 PF02607 B12 binding domain FY145_09260 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY145_09260 PF02574 Homocysteine S-methyltransferase FY145_09280 PF13505 Outer membrane protein beta-barrel domain FY145_09295 PF04402 Protein of unknown function (DUF541) FY145_09305 PF01894 Uncharacterised protein family UPF0047 FY145_09310 PF08446 PAS fold FY145_09310 PF01590 GAF domain FY145_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_09310 PF00512 His Kinase A (phospho-acceptor) domain FY145_09310 PF00360 Phytochrome region FY145_09320 PF04545 Sigma-70, region 4 FY145_09320 PF04542 Sigma-70 region 2 FY145_09320 PF00140 Sigma-70 factor, region 1.2 FY145_09320 PF04539 Sigma-70 region 3 FY145_09320 PF04546 Sigma-70, non-essential region FY145_09320 PF03979 Sigma-70 factor, region 1.1 FY145_09325 PF01807 CHC2 zinc finger FY145_09325 PF10410 DnaB-helicase binding domain of primase FY145_09325 PF08278 DNA primase DnaG DnaB-binding FY145_09325 PF08275 DNA primase catalytic core, N-terminal domain FY145_09345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY145_09345 PF00117 Glutamine amidotransferase class-I FY145_09350 PF01554 MatE FY145_09355 PF02743 Cache domain FY145_09355 PF00672 HAMP domain FY145_09355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_09365 PF04228 Putative neutral zinc metallopeptidase FY145_09380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_09380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY145_09380 PF02142 MGS-like domain FY145_09390 PF07694 5TMR of 5TMR-LYT FY145_09390 PF00990 Diguanylate cyclase, GGDEF domain FY145_09405 PF01272 Transcription elongation factor, GreA/GreB, C-term FY145_09405 PF03449 Transcription elongation factor, N-terminal FY145_09410 PF00534 Glycosyl transferases group 1 FY145_09415 PF01037 Lrp/AsnC ligand binding domain FY145_09420 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_09425 PF03466 LysR substrate binding domain FY145_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_09435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY145_09450 PF03466 LysR substrate binding domain FY145_09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_09460 PF01699 Sodium/calcium exchanger protein FY145_09465 PF00155 Aminotransferase class I and II FY145_09470 PF05231 MASE1 FY145_09470 PF00563 EAL domain FY145_09485 PF00313 'Cold-shock' DNA-binding domain FY145_09490 PF00753 Metallo-beta-lactamase superfamily FY145_09500 PF12802 MarR family FY145_09505 PF00072 Response regulator receiver domain FY145_09505 PF00486 Transcriptional regulatory protein, C terminal FY145_09510 PF00672 HAMP domain FY145_09510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_09510 PF00512 His Kinase A (phospho-acceptor) domain FY145_09515 PF01588 Putative tRNA binding domain FY145_09520 PF03807 NADP oxidoreductase coenzyme F420-dependent FY145_09520 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY145_09535 PF01790 Prolipoprotein diacylglyceryl transferase FY145_09545 PF02578 Multi-copper polyphenol oxidoreductase laccase FY145_09560 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY145_09560 PF14572 Phosphoribosyl synthetase-associated domain FY145_09570 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY145_09580 PF00535 Glycosyl transferase family 2 FY145_09585 PF00672 HAMP domain FY145_09585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_09590 PF00171 Aldehyde dehydrogenase family FY145_09595 PF02954 Bacterial regulatory protein, Fis family FY145_09600 PF03707 Bacterial signalling protein N terminal repeat FY145_09600 PF00990 Diguanylate cyclase, GGDEF domain FY145_09600 PF13188 PAS domain FY145_09600 PF00563 EAL domain FY145_09605 PF01386 Ribosomal L25p family FY145_09605 PF14693 Ribosomal protein TL5, C-terminal domain FY145_09610 PF08448 PAS fold FY145_09610 PF08447 PAS fold FY145_09610 PF00990 Diguanylate cyclase, GGDEF domain FY145_09610 PF00563 EAL domain FY145_09620 PF01195 Peptidyl-tRNA hydrolase FY145_09630 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY145_09635 PF06071 Protein of unknown function (DUF933) FY145_09635 PF01926 50S ribosome-binding GTPase FY145_09655 PF00156 Phosphoribosyl transferase domain FY145_09665 PF02167 Cytochrome C1 family FY145_09665 PF00032 Cytochrome b(C-terminal)/b6/petD FY145_09665 PF00033 Cytochrome b/b6/petB FY145_09670 PF00033 Cytochrome b/b6/petB FY145_09670 PF00032 Cytochrome b(C-terminal)/b6/petD FY145_09675 PF00355 Rieske [2Fe-2S] domain FY145_09675 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY145_09685 PF00664 ABC transporter transmembrane region FY145_09685 PF00005 ABC transporter FY145_09695 PF00005 ABC transporter FY145_09695 PF00664 ABC transporter transmembrane region FY145_09705 PF00588 SpoU rRNA Methylase family FY145_09710 PF02690 Na+/Pi-cotransporter FY145_09720 PF01218 Coproporphyrinogen III oxidase FY145_09735 PF01743 Poly A polymerase head domain FY145_09735 PF12627 Probable RNA and SrmB- binding site of polymerase A FY145_09735 PF13735 tRNA nucleotidyltransferase domain 2 putative FY145_09740 PF00293 NUDIX domain FY145_09750 PF07726 ATPase family associated with various cellular activities (AAA) FY145_09750 PF17863 AAA lid domain FY145_09770 PF00583 Acetyltransferase (GNAT) family FY145_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_09775 PF03466 LysR substrate binding domain FY145_09785 PF07690 Major Facilitator Superfamily FY145_09795 PF13409 Glutathione S-transferase, N-terminal domain FY145_09800 PF00293 NUDIX domain FY145_09810 PF00682 HMGL-like FY145_09810 PF08502 LeuA allosteric (dimerisation) domain FY145_09815 PF03594 Benzoate membrane transport protein FY145_09830 PF04545 Sigma-70, region 4 FY145_09830 PF04542 Sigma-70 region 2 FY145_09840 PF00574 Clp protease FY145_09845 PF04955 HupE / UreJ protein FY145_09855 PF14489 QueF-like protein FY145_09860 PF16916 Dimerisation domain of Zinc Transporter FY145_09860 PF01545 Cation efflux family FY145_09870 PF13458 Periplasmic binding protein FY145_09880 PF01022 Bacterial regulatory protein, arsR family FY145_09885 PF00005 ABC transporter FY145_09885 PF00571 CBS domain FY145_09890 PF00528 Binding-protein-dependent transport system inner membrane component FY145_09895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY145_09905 PF00265 Thymidine kinase FY145_09910 PF00127 Copper binding proteins, plastocyanin/azurin family FY145_09920 PF00196 Bacterial regulatory proteins, luxR family FY145_09920 PF03472 Autoinducer binding domain FY145_09925 PF03350 Uncharacterized protein family, UPF0114 FY145_09930 PF00593 TonB dependent receptor FY145_09930 PF04886 PT repeat FY145_09930 PF07715 TonB-dependent Receptor Plug Domain FY145_09940 PF04715 Anthranilate synthase component I, N terminal region FY145_09940 PF00425 chorismate binding enzyme FY145_09940 PF00117 Glutamine amidotransferase class-I FY145_09950 PF01966 HD domain FY145_09950 PF11871 Domain of unknown function (DUF3391) FY145_09955 PF01979 Amidohydrolase family FY145_09955 PF13382 Adenine deaminase C-terminal domain FY145_09960 PF00583 Acetyltransferase (GNAT) family FY145_09965 PF00128 Alpha amylase, catalytic domain FY145_09970 PF00294 pfkB family carbohydrate kinase FY145_09990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY145_09990 PF01926 50S ribosome-binding GTPase FY145_10010 PF05992 SbmA/BacA-like family FY145_10020 PF00557 Metallopeptidase family M24 FY145_10035 PF00111 2Fe-2S iron-sulfur cluster binding domain FY145_10035 PF01799 [2Fe-2S] binding domain FY145_10040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY145_10040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY145_10050 PF03466 LysR substrate binding domain FY145_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10065 PF01979 Amidohydrolase family FY145_10075 PF01070 FMN-dependent dehydrogenase FY145_10080 PF00893 Small Multidrug Resistance protein FY145_10085 PF17932 Tetracyclin repressor-like, C-terminal domain FY145_10085 PF00440 Bacterial regulatory proteins, tetR family FY145_10090 PF00768 D-alanyl-D-alanine carboxypeptidase FY145_10090 PF07943 Penicillin-binding protein 5, C-terminal domain FY145_10100 PF00576 HIUase/Transthyretin family FY145_10105 PF04115 Ureidoglycolate lyase FY145_10120 PF01014 Uricase FY145_10120 PF09349 OHCU decarboxylase FY145_10130 PF06299 Protein of unknown function (DUF1045) FY145_10135 PF01266 FAD dependent oxidoreductase FY145_10140 PF01266 FAD dependent oxidoreductase FY145_10140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY145_10145 PF00672 HAMP domain FY145_10145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY145_10145 PF00072 Response regulator receiver domain FY145_10145 PF01627 Hpt domain FY145_10145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_10145 PF00512 His Kinase A (phospho-acceptor) domain FY145_10150 PF00270 DEAD/DEAH box helicase FY145_10150 PF00271 Helicase conserved C-terminal domain FY145_10160 PF07681 DoxX FY145_10165 PF01476 LysM domain FY145_10165 PF03734 L,D-transpeptidase catalytic domain FY145_10175 PF14403 Circularly permuted ATP-grasp type 2 FY145_10185 PF08379 Bacterial transglutaminase-like N-terminal region FY145_10185 PF01841 Transglutaminase-like superfamily FY145_10210 PF02653 Branched-chain amino acid transport system / permease component FY145_10215 PF00005 ABC transporter FY145_10220 PF13407 Periplasmic binding protein domain FY145_10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10225 PF03466 LysR substrate binding domain FY145_10275 PF03743 Bacterial conjugation TrbI-like protein FY145_10285 PF04335 VirB8 protein FY145_10290 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY145_10305 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY145_10320 PF00437 Type II/IV secretion system protein FY145_10330 PF02534 Type IV secretory system Conjugative DNA transfer FY145_10340 PF01381 Helix-turn-helix FY145_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10345 PF03466 LysR substrate binding domain FY145_10350 PF02321 Outer membrane efflux protein FY145_10355 PF13533 Biotin-lipoyl like FY145_10370 PF12833 Helix-turn-helix domain FY145_10370 PF02311 AraC-like ligand binding domain FY145_10385 PF03466 LysR substrate binding domain FY145_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10395 PF00753 Metallo-beta-lactamase superfamily FY145_10395 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY145_10395 PF10996 Beta-Casp domain FY145_10410 PF03466 LysR substrate binding domain FY145_10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10420 PF01464 Transglycosylase SLT domain FY145_10445 PF13614 AAA domain FY145_10465 PF06067 Domain of unknown function (DUF932) FY145_10480 PF07690 Major Facilitator Superfamily FY145_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10485 PF03466 LysR substrate binding domain FY145_10490 PF05284 Protein of unknown function (DUF736) FY145_10505 PF02463 RecF/RecN/SMC N terminal domain FY145_10535 PF00271 Helicase conserved C-terminal domain FY145_10550 PF09382 RQC domain FY145_10550 PF00270 DEAD/DEAH box helicase FY145_10550 PF00271 Helicase conserved C-terminal domain FY145_10550 PF00570 HRDC domain FY145_10550 PF16124 RecQ zinc-binding FY145_10555 PF02661 Fic/DOC family FY145_10555 PF13784 Fic/DOC family N-terminal FY145_10570 PF03358 NADPH-dependent FMN reductase FY145_10575 PF00561 alpha/beta hydrolase fold FY145_10595 PF13533 Biotin-lipoyl like FY145_10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10600 PF03466 LysR substrate binding domain FY145_10605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY145_10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10610 PF03466 LysR substrate binding domain FY145_10625 PF00857 Isochorismatase family FY145_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_10630 PF03466 LysR substrate binding domain FY145_10635 PF17862 AAA+ lid domain FY145_10635 PF01434 Peptidase family M41 FY145_10635 PF00004 ATPase family associated with various cellular activities (AAA) FY145_10645 PF00665 Integrase core domain FY145_10650 PF01695 IstB-like ATP binding protein FY145_10660 PF00672 HAMP domain FY145_10660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_10665 PF07690 Major Facilitator Superfamily FY145_10675 PF02574 Homocysteine S-methyltransferase FY145_10675 PF00809 Pterin binding enzyme FY145_10675 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY145_10675 PF02607 B12 binding domain FY145_10675 PF02310 B12 binding domain FY145_10680 PF00528 Binding-protein-dependent transport system inner membrane component FY145_10685 PF00528 Binding-protein-dependent transport system inner membrane component FY145_10690 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_10695 PF00005 ABC transporter FY145_10715 PF00331 Glycosyl hydrolase family 10 FY145_10720 PF00535 Glycosyl transferase family 2 FY145_10735 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY145_10750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY145_10750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY145_10750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY145_10750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY145_10765 PF01152 Bacterial-like globin FY145_10785 PF00440 Bacterial regulatory proteins, tetR family FY145_10785 PF08362 YcdC-like protein, C-terminal region FY145_10790 PF01546 Peptidase family M20/M25/M40 FY145_10790 PF07687 Peptidase dimerisation domain FY145_10795 PF01979 Amidohydrolase family FY145_10800 PF00293 NUDIX domain FY145_10805 PF00005 ABC transporter FY145_10810 PF00528 Binding-protein-dependent transport system inner membrane component FY145_10815 PF00528 Binding-protein-dependent transport system inner membrane component FY145_10830 PF00873 AcrB/AcrD/AcrF family FY145_10845 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY145_10850 PF01730 UreF FY145_10855 PF02814 UreE urease accessory protein, N-terminal domain FY145_10855 PF05194 UreE urease accessory protein, C-terminal domain FY145_10860 PF08534 Redoxin FY145_10870 PF01979 Amidohydrolase family FY145_10870 PF00449 Urease alpha-subunit, N-terminal domain FY145_10880 PF07007 Lysozyme inhibitor LprI FY145_10890 PF00699 Urease beta subunit FY145_10895 PF06906 Protein of unknown function (DUF1272) FY145_10900 PF00547 Urease, gamma subunit FY145_10905 PF01774 UreD urease accessory protein FY145_10915 PF00005 ABC transporter FY145_10925 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_10925 PF00005 ABC transporter FY145_10935 PF02653 Branched-chain amino acid transport system / permease component FY145_10945 PF10931 Protein of unknown function (DUF2735) FY145_10950 PF03951 Glutamine synthetase, beta-Grasp domain FY145_10950 PF00120 Glutamine synthetase, catalytic domain FY145_10960 PF01627 Hpt domain FY145_10960 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY145_10960 PF00512 His Kinase A (phospho-acceptor) domain FY145_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_10960 PF00072 Response regulator receiver domain FY145_10960 PF00989 PAS fold FY145_10965 PF00072 Response regulator receiver domain FY145_10975 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY145_10975 PF01522 Polysaccharide deacetylase FY145_10980 PF13458 Periplasmic binding protein FY145_10990 PF00005 ABC transporter FY145_10995 PF00005 ABC transporter FY145_10995 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_11000 PF11862 Domain of unknown function (DUF3382) FY145_11000 PF02653 Branched-chain amino acid transport system / permease component FY145_11005 PF02653 Branched-chain amino acid transport system / permease component FY145_11010 PF00459 Inositol monophosphatase family FY145_11040 PF00072 Response regulator receiver domain FY145_11040 PF00486 Transcriptional regulatory protein, C terminal FY145_11060 PF10090 Histidine phosphotransferase C-terminal domain FY145_11075 PF00588 SpoU rRNA Methylase family FY145_11085 PF00849 RNA pseudouridylate synthase FY145_11095 PF00140 Sigma-70 factor, region 1.2 FY145_11095 PF04542 Sigma-70 region 2 FY145_11095 PF04545 Sigma-70, region 4 FY145_11105 PF00709 Adenylosuccinate synthetase FY145_11130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_11140 PF03167 Uracil DNA glycosylase superfamily FY145_11145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_11150 PF04304 Protein of unknown function (DUF454) FY145_11155 PF00005 ABC transporter FY145_11160 PF01032 FecCD transport family FY145_11165 PF01497 Periplasmic binding protein FY145_11175 PF06228 Haem utilisation ChuX/HutX FY145_11190 PF13443 Cro/C1-type HTH DNA-binding domain FY145_11200 PF00551 Formyl transferase FY145_11215 PF00512 His Kinase A (phospho-acceptor) domain FY145_11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_11215 PF00672 HAMP domain FY145_11220 PF00486 Transcriptional regulatory protein, C terminal FY145_11220 PF00072 Response regulator receiver domain FY145_11230 PF03401 Tripartite tricarboxylate transporter family receptor FY145_11240 PF01970 Tripartite tricarboxylate transporter TctA family FY145_11255 PF01032 FecCD transport family FY145_11260 PF01032 FecCD transport family FY145_11265 PF00005 ABC transporter FY145_11270 PF00210 Ferritin-like domain FY145_11285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_11285 PF00672 HAMP domain FY145_11290 PF00248 Aldo/keto reductase family FY145_11295 PF07690 Major Facilitator Superfamily FY145_11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_11300 PF03466 LysR substrate binding domain FY145_11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_11305 PF03466 LysR substrate binding domain FY145_11310 PF07859 alpha/beta hydrolase fold FY145_11315 PF13533 Biotin-lipoyl like FY145_11320 PF00873 AcrB/AcrD/AcrF family FY145_11335 PF13091 PLD-like domain FY145_11335 PF13396 Phospholipase_D-nuclease N-terminal FY145_11340 PF08543 Phosphomethylpyrimidine kinase FY145_11345 PF00484 Carbonic anhydrase FY145_11355 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY145_11355 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY145_11365 PF00083 Sugar (and other) transporter FY145_11370 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY145_11370 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY145_11370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY145_11375 PF02233 NAD(P) transhydrogenase beta subunit FY145_11380 PF01613 Flavin reductase like domain FY145_11385 PF00881 Nitroreductase family FY145_11390 PF00561 alpha/beta hydrolase fold FY145_11395 PF01042 Endoribonuclease L-PSP FY145_11400 PF00857 Isochorismatase family FY145_11405 PF00296 Luciferase-like monooxygenase FY145_11410 PF01126 Heme oxygenase FY145_11415 PF00701 Dihydrodipicolinate synthetase family FY145_11420 PF00392 Bacterial regulatory proteins, gntR family FY145_11420 PF07729 FCD domain FY145_11430 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11435 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11440 PF17912 MalK OB fold domain FY145_11440 PF03459 TOBE domain FY145_11440 PF00005 ABC transporter FY145_11445 PF00294 pfkB family carbohydrate kinase FY145_11450 PF03576 Peptidase family S58 FY145_11455 PF01063 Amino-transferase class IV FY145_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_11460 PF03466 LysR substrate binding domain FY145_11465 PF00144 Beta-lactamase FY145_11470 PF00005 ABC transporter FY145_11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_11475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_11475 PF00005 ABC transporter FY145_11480 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_11480 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11485 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_11495 PF01244 Membrane dipeptidase (Peptidase family M19) FY145_11505 PF03706 Lysylphosphatidylglycerol synthase TM region FY145_11505 PF09924 Uncharacterised conserved protein (DUF2156) FY145_11520 PF07690 Major Facilitator Superfamily FY145_11530 PF04444 Catechol dioxygenase N terminus FY145_11530 PF00775 Dioxygenase FY145_11535 PF00465 Iron-containing alcohol dehydrogenase FY145_11540 PF04909 Amidohydrolase FY145_11545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_11545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY145_11550 PF01613 Flavin reductase like domain FY145_11570 PF00512 His Kinase A (phospho-acceptor) domain FY145_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_11575 PF00486 Transcriptional regulatory protein, C terminal FY145_11575 PF00072 Response regulator receiver domain FY145_11585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY145_11590 PF00005 ABC transporter FY145_11590 PF08402 TOBE domain FY145_11595 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11610 PF00486 Transcriptional regulatory protein, C terminal FY145_11610 PF00072 Response regulator receiver domain FY145_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_11615 PF00512 His Kinase A (phospho-acceptor) domain FY145_11615 PF08448 PAS fold FY145_11615 PF13188 PAS domain FY145_11615 PF00072 Response regulator receiver domain FY145_11620 PF00202 Aminotransferase class-III FY145_11625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_11625 PF03466 LysR substrate binding domain FY145_11630 PF00313 'Cold-shock' DNA-binding domain FY145_11670 PF01259 SAICAR synthetase FY145_11675 PF00440 Bacterial regulatory proteins, tetR family FY145_11680 PF00529 HlyD membrane-fusion protein of T1SS FY145_11680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_11685 PF00873 AcrB/AcrD/AcrF family FY145_11690 PF02321 Outer membrane efflux protein FY145_11695 PF01132 Elongation factor P (EF-P) OB domain FY145_11695 PF08207 Elongation factor P (EF-P) KOW-like domain FY145_11695 PF09285 Elongation factor P, C-terminal FY145_11700 PF00152 tRNA synthetases class II (D, K and N) FY145_11705 PF12544 Lysine-2,3-aminomutase FY145_11705 PF04055 Radical SAM superfamily FY145_11720 PF03466 LysR substrate binding domain FY145_11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_11725 PF01266 FAD dependent oxidoreductase FY145_11735 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11740 PF00005 ABC transporter FY145_11740 PF03459 TOBE domain FY145_11750 PF03576 Peptidase family S58 FY145_11755 PF05690 Thiazole biosynthesis protein ThiG FY145_11765 PF01266 FAD dependent oxidoreductase FY145_11770 PF13667 ThiC-associated domain FY145_11770 PF01964 Radical SAM ThiC family FY145_11780 PF00550 Phosphopantetheine attachment site FY145_11810 PF00005 ABC transporter FY145_11810 PF00664 ABC transporter transmembrane region FY145_11815 PF13545 Crp-like helix-turn-helix domain FY145_11815 PF00027 Cyclic nucleotide-binding domain FY145_11825 PF00672 HAMP domain FY145_11825 PF00211 Adenylate and Guanylate cyclase catalytic domain FY145_11835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY145_11835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY145_11835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY145_11840 PF00534 Glycosyl transferases group 1 FY145_11840 PF13439 Glycosyltransferase Family 4 FY145_11855 PF00005 ABC transporter FY145_11855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_11860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_11865 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11870 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_11870 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11885 PF03033 Glycosyltransferase family 28 N-terminal domain FY145_11885 PF04101 Glycosyltransferase family 28 C-terminal domain FY145_11890 PF03932 CutC family FY145_11895 PF07690 Major Facilitator Superfamily FY145_11905 PF00728 Glycosyl hydrolase family 20, catalytic domain FY145_11905 PF02838 Glycosyl hydrolase family 20, domain 2 FY145_11915 PF01418 Helix-turn-helix domain, rpiR family FY145_11915 PF01380 SIS domain FY145_11925 PF00005 ABC transporter FY145_11925 PF17912 MalK OB fold domain FY145_11930 PF01547 Bacterial extracellular solute-binding protein FY145_11935 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11940 PF00528 Binding-protein-dependent transport system inner membrane component FY145_11955 PF07702 UTRA domain FY145_11955 PF00392 Bacterial regulatory proteins, gntR family FY145_11960 PF01380 SIS domain FY145_11965 PF01979 Amidohydrolase family FY145_11970 PF00480 ROK family FY145_11975 PF01494 FAD binding domain FY145_11980 PF01569 PAP2 superfamily FY145_11985 PF13288 DXP reductoisomerase C-terminal domain FY145_11985 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY145_11985 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY145_11990 PF00155 Aminotransferase class I and II FY145_12000 PF01103 Surface antigen FY145_12000 PF07244 Surface antigen variable number repeat FY145_12000 PF17243 POTRA domain TamA domain 1 FY145_12010 PF01584 CheW-like domain FY145_12015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_12015 PF13426 PAS domain FY145_12015 PF08447 PAS fold FY145_12020 PF02634 FdhD/NarQ family FY145_12025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY145_12030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY145_12030 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY145_12035 PF00231 ATP synthase FY145_12040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY145_12040 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY145_12040 PF00306 ATP synthase alpha/beta chain, C terminal domain FY145_12045 PF00213 ATP synthase delta (OSCP) subunit FY145_12055 PF18074 Primosomal protein N C-terminal domain FY145_12055 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY145_12055 PF17764 3′ DNA-binding domain (3′BD) FY145_12055 PF00270 DEAD/DEAH box helicase FY145_12060 PF02899 Phage integrase, N-terminal SAM-like domain FY145_12060 PF00589 Phage integrase family FY145_12080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_12080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY145_12085 PF01810 LysE type translocator FY145_12095 PF00364 Biotin-requiring enzyme FY145_12095 PF02817 e3 binding domain FY145_12095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY145_12100 PF02779 Transketolase, pyrimidine binding domain FY145_12100 PF16870 2-oxoglutarate dehydrogenase C-terminal FY145_12100 PF00676 Dehydrogenase E1 component FY145_12100 PF16078 2-oxoglutarate dehydrogenase N-terminus FY145_12105 PF00549 CoA-ligase FY145_12105 PF02629 CoA binding domain FY145_12110 PF00549 CoA-ligase FY145_12110 PF08442 ATP-grasp domain FY145_12115 PF00056 lactate/malate dehydrogenase, NAD binding domain FY145_12115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY145_12120 PF03969 AFG1-like ATPase FY145_12125 PF02974 Protease inhibitor Inh FY145_12130 PF13085 2Fe-2S iron-sulfur cluster binding domain FY145_12130 PF13237 4Fe-4S dicluster domain FY145_12135 PF00890 FAD binding domain FY145_12135 PF02910 Fumarate reductase flavoprotein C-term FY145_12145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY145_12170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY145_12170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY145_12175 PF00814 Glycoprotease family FY145_12180 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY145_12180 PF03900 Porphobilinogen deaminase, C-terminal domain FY145_12205 PF00117 Glutamine amidotransferase class-I FY145_12215 PF02325 YGGT family FY145_12220 PF02594 Uncharacterised ACR, YggU family COG1872 FY145_12225 PF00719 Inorganic pyrophosphatase FY145_12235 PF00679 Elongation factor G C-terminus FY145_12235 PF03144 Elongation factor Tu domain 2 FY145_12235 PF00009 Elongation factor Tu GTP binding domain FY145_12240 PF01432 Peptidase family M3 FY145_12245 PF01047 MarR family FY145_12250 PF07690 Major Facilitator Superfamily FY145_12255 PF00764 Arginosuccinate synthase FY145_12260 PF00106 short chain dehydrogenase FY145_12265 PF01810 LysE type translocator FY145_12270 PF00005 ABC transporter FY145_12275 PF02653 Branched-chain amino acid transport system / permease component FY145_12285 PF04055 Radical SAM superfamily FY145_12300 PF01329 Pterin 4 alpha carbinolamine dehydratase FY145_12305 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY145_12310 PF02834 LigT like Phosphoesterase FY145_12315 PF13472 GDSL-like Lipase/Acylhydrolase family FY145_12320 PF00005 ABC transporter FY145_12330 PF01027 Inhibitor of apoptosis-promoting Bax1 FY145_12345 PF00694 Aconitase C-terminal domain FY145_12345 PF00330 Aconitase family (aconitate hydratase) FY145_12350 PF00005 ABC transporter FY145_12355 PF03379 CcmB protein FY145_12360 PF01578 Cytochrome C assembly protein FY145_12370 PF08534 Redoxin FY145_12375 PF00990 Diguanylate cyclase, GGDEF domain FY145_12380 PF10755 Protein of unknown function (DUF2585) FY145_12385 PF04279 Intracellular septation protein A FY145_12390 PF00448 SRP54-type protein, GTPase domain FY145_12390 PF02881 SRP54-type protein, helical bundle domain FY145_12395 PF00919 Uncharacterized protein family UPF0004 FY145_12395 PF04055 Radical SAM superfamily FY145_12400 PF01678 Diaminopimelate epimerase FY145_12405 PF12706 Beta-lactamase superfamily domain FY145_12415 PF00448 SRP54-type protein, GTPase domain FY145_12415 PF02881 SRP54-type protein, helical bundle domain FY145_12415 PF02978 Signal peptide binding domain FY145_12420 PF02153 Prephenate dehydrogenase FY145_12420 PF01817 Chorismate mutase type II FY145_12425 PF00886 Ribosomal protein S16 FY145_12430 PF05239 PRC-barrel domain FY145_12430 PF01782 RimM N-terminal domain FY145_12435 PF01746 tRNA (Guanine-1)-methyltransferase FY145_12445 PF01245 Ribosomal protein L19 FY145_12450 PF00664 ABC transporter transmembrane region FY145_12450 PF00005 ABC transporter FY145_12455 PF00529 HlyD membrane-fusion protein of T1SS FY145_12455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_12465 PF07690 Major Facilitator Superfamily FY145_12470 PF00330 Aconitase family (aconitate hydratase) FY145_12485 PF01435 Peptidase family M48 FY145_12490 PF00005 ABC transporter FY145_12495 PF00528 Binding-protein-dependent transport system inner membrane component FY145_12500 PF01547 Bacterial extracellular solute-binding protein FY145_12510 PF00005 ABC transporter FY145_12510 PF16326 ABC transporter C-terminal domain FY145_12520 PF04204 Homoserine O-succinyltransferase FY145_12525 PF01263 Aldose 1-epimerase FY145_12530 PF00912 Transglycosylase FY145_12535 PF00348 Polyprenyl synthetase FY145_12540 PF13488 Glycine zipper FY145_12540 PF00691 OmpA family FY145_12545 PF04551 GcpE protein FY145_12550 PF07690 Major Facilitator Superfamily FY145_12555 PF00455 DeoR C terminal sensor domain FY145_12555 PF08220 DeoR-like helix-turn-helix domain FY145_12560 PF00364 Biotin-requiring enzyme FY145_12560 PF02436 Conserved carboxylase domain FY145_12560 PF00289 Biotin carboxylase, N-terminal domain FY145_12560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_12560 PF00682 HMGL-like FY145_12560 PF02785 Biotin carboxylase C-terminal domain FY145_12565 PF00196 Bacterial regulatory proteins, luxR family FY145_12565 PF00072 Response regulator receiver domain FY145_12570 PF00664 ABC transporter transmembrane region FY145_12570 PF00005 ABC transporter FY145_12580 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY145_12580 PF06165 Glycosyltransferase family 36 FY145_12580 PF10091 Putative glucoamylase FY145_12585 PF07687 Peptidase dimerisation domain FY145_12585 PF01546 Peptidase family M20/M25/M40 FY145_12590 PF01266 FAD dependent oxidoreductase FY145_12595 PF00291 Pyridoxal-phosphate dependent enzyme FY145_12600 PF00920 Dehydratase family FY145_12605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY145_12605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY145_12610 PF01370 NAD dependent epimerase/dehydratase family FY145_12615 PF01565 FAD binding domain FY145_12615 PF02913 FAD linked oxidases, C-terminal domain FY145_12620 PF07729 FCD domain FY145_12620 PF00392 Bacterial regulatory proteins, gntR family FY145_12630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY145_12635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY145_12640 PF03480 Bacterial extracellular solute-binding protein, family 7 FY145_12645 PF16177 Acetyl-coenzyme A synthetase N-terminus FY145_12645 PF00501 AMP-binding enzyme FY145_12645 PF13193 AMP-binding enzyme C-terminal domain FY145_12655 PF01168 Alanine racemase, N-terminal domain FY145_12660 PF08264 Anticodon-binding domain of tRNA FY145_12660 PF00133 tRNA synthetases class I (I, L, M and V) FY145_12660 PF13603 Leucyl-tRNA synthetase, Domain 2 FY145_12675 PF11953 Domain of unknown function (DUF3470) FY145_12675 PF00037 4Fe-4S binding domain FY145_12680 PF01479 S4 domain FY145_12680 PF00579 tRNA synthetases class I (W and Y) FY145_12695 PF01494 FAD binding domain FY145_12705 PF00543 Nitrogen regulatory protein P-II FY145_12710 PF00909 Ammonium Transporter Family FY145_12715 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY145_12715 PF17854 FtsK alpha domain FY145_12715 PF09397 Ftsk gamma domain FY145_12715 PF01580 FtsK/SpoIIIE family FY145_12720 PF03548 Outer membrane lipoprotein carrier protein LolA FY145_12735 PF00072 Response regulator receiver domain FY145_12735 PF00486 Transcriptional regulatory protein, C terminal FY145_12745 PF02559 CarD-like/TRCF domain FY145_12750 PF05088 Bacterial NAD-glutamate dehydrogenase FY145_12755 PF11700 Vacuole effluxer Atg22 like FY145_12760 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY145_12760 PF05233 PHB accumulation regulatory domain FY145_12765 PF02803 Thiolase, C-terminal domain FY145_12765 PF00108 Thiolase, N-terminal domain FY145_12780 PF00210 Ferritin-like domain FY145_12785 PF00293 NUDIX domain FY145_12790 PF04748 Divergent polysaccharide deacetylase FY145_12795 PF13180 PDZ domain FY145_12795 PF03572 Peptidase family S41 FY145_12805 PF02590 Predicted SPOUT methyltransferase FY145_12815 PF01467 Cytidylyltransferase-like FY145_12820 PF00171 Aldehyde dehydrogenase family FY145_12825 PF00696 Amino acid kinase family FY145_12825 PF01472 PUA domain FY145_12830 PF01018 GTP1/OBG FY145_12830 PF01926 50S ribosome-binding GTPase FY145_12835 PF13302 Acetyltransferase (GNAT) domain FY145_12845 PF01016 Ribosomal L27 protein FY145_12850 PF00829 Ribosomal prokaryotic L21 protein FY145_12865 PF03328 HpcH/HpaI aldolase/citrate lyase family FY145_12875 PF00694 Aconitase C-terminal domain FY145_12880 PF00180 Isocitrate/isopropylmalate dehydrogenase FY145_12885 PF03150 Di-haem cytochrome c peroxidase FY145_12890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY145_12890 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY145_12895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_12900 PF01888 CbiD FY145_12905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_12915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_12920 PF02571 Precorrin-6x reductase CbiJ/CobK FY145_12925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_12930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_12935 PF02570 Precorrin-8X methylmutase FY145_12940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY145_12945 PF02514 CobN/Magnesium Chelatase FY145_12950 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY145_12950 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY145_12960 PF12557 Cob(I)alamin adenosyltransferase N terminal FY145_12960 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY145_12965 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY145_12965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY145_12970 PF03186 CobD/Cbib protein FY145_12975 PF00155 Aminotransferase class I and II FY145_12980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_12980 PF13378 Enolase C-terminal domain-like FY145_12985 PF05336 L-rhamnose mutarotase FY145_12990 PF01232 Mannitol dehydrogenase Rossmann domain FY145_12990 PF08125 Mannitol dehydrogenase C-terminal domain FY145_12995 PF08240 Alcohol dehydrogenase GroES-like domain FY145_12995 PF00107 Zinc-binding dehydrogenase FY145_13005 PF00248 Aldo/keto reductase family FY145_13015 PF02653 Branched-chain amino acid transport system / permease component FY145_13020 PF00005 ABC transporter FY145_13025 PF00392 Bacterial regulatory proteins, gntR family FY145_13025 PF07729 FCD domain FY145_13030 PF08666 SAF domain FY145_13030 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY145_13035 PF02142 MGS-like domain FY145_13035 PF01808 AICARFT/IMPCHase bienzyme FY145_13045 PF01189 16S rRNA methyltransferase RsmB/F FY145_13045 PF01029 NusB family FY145_13050 PF01435 Peptidase family M48 FY145_13060 PF17762 HTH domain found in ParB protein FY145_13060 PF02195 ParB-like nuclease domain FY145_13065 PF13614 AAA domain FY145_13070 PF02527 rRNA small subunit methyltransferase G FY145_13075 PF01134 Glucose inhibited division protein A FY145_13075 PF13932 GidA associated domain FY145_13080 PF01926 50S ribosome-binding GTPase FY145_13080 PF12631 MnmE helical domain FY145_13080 PF10396 GTP-binding protein TrmE N-terminus FY145_13085 PF07497 Rho termination factor, RNA-binding domain FY145_13085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY145_13085 PF07498 Rho termination factor, N-terminal domain FY145_13090 PF03653 Uncharacterised protein family (UPF0093) FY145_13095 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY145_13100 PF03618 Kinase/pyrophosphorylase FY145_13105 PF02545 Maf-like protein FY145_13110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY145_13110 PF01488 Shikimate / quinate 5-dehydrogenase FY145_13110 PF08501 Shikimate dehydrogenase substrate binding domain FY145_13115 PF01121 Dephospho-CoA kinase FY145_13120 PF00929 Exonuclease FY145_13125 PF02556 Preprotein translocase subunit SecB FY145_13130 PF04186 FxsA cytoplasmic membrane protein FY145_13140 PF03562 MltA specific insert domain FY145_13140 PF06725 3D domain FY145_13155 PF00204 DNA gyrase B FY145_13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_13155 PF01751 Toprim domain FY145_13155 PF00986 DNA gyrase B subunit, carboxyl terminus FY145_13165 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY145_13180 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY145_13185 PF00291 Pyridoxal-phosphate dependent enzyme FY145_13190 PF00290 Tryptophan synthase alpha chain FY145_13195 PF01039 Carboxyl transferase domain FY145_13200 PF02875 Mur ligase family, glutamate ligase domain FY145_13200 PF08245 Mur ligase middle domain FY145_13205 PF00085 Thioredoxin FY145_13210 PF12705 PD-(D/E)XK nuclease superfamily FY145_13210 PF00580 UvrD/REP helicase N-terminal domain FY145_13210 PF13361 UvrD-like helicase C-terminal domain FY145_13220 PF12804 MobA-like NTP transferase domain FY145_13225 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY145_13230 PF00512 His Kinase A (phospho-acceptor) domain FY145_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_13235 PF05221 S-adenosyl-L-homocysteine hydrolase FY145_13235 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY145_13240 PF00381 PTS HPr component phosphorylation site FY145_13245 PF03610 PTS system fructose IIA component FY145_13245 PF03830 PTS system sorbose subfamily IIB component FY145_13250 PF07475 HPr Serine kinase C-terminal domain FY145_13250 PF02603 HPr Serine kinase N terminus FY145_13255 PF13756 Stimulus-sensing domain FY145_13255 PF13755 Sensor N-terminal transmembrane domain FY145_13255 PF00512 His Kinase A (phospho-acceptor) domain FY145_13255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_13255 PF00672 HAMP domain FY145_13260 PF00072 Response regulator receiver domain FY145_13260 PF00486 Transcriptional regulatory protein, C terminal FY145_13265 PF01293 Phosphoenolpyruvate carboxykinase FY145_13270 PF00472 RF-1 domain FY145_13275 PF04972 BON domain FY145_13275 PF01476 LysM domain FY145_13280 PF00485 Phosphoribulokinase / Uridine kinase family FY145_13285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY145_13290 PF00977 Histidine biosynthesis protein FY145_13295 PF00977 Histidine biosynthesis protein FY145_13300 PF00117 Glutamine amidotransferase class-I FY145_13310 PF00475 Imidazoleglycerol-phosphate dehydratase FY145_13315 PF00227 Proteasome subunit FY145_13320 PF10431 C-terminal, D2-small domain, of ClpB protein FY145_13320 PF07724 AAA domain (Cdc48 subfamily) FY145_13320 PF00004 ATPase family associated with various cellular activities (AAA) FY145_13330 PF01274 Malate synthase FY145_13345 PF00072 Response regulator receiver domain FY145_13350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_13350 PF00512 His Kinase A (phospho-acceptor) domain FY145_13355 PF00270 DEAD/DEAH box helicase FY145_13355 PF04408 Helicase associated domain (HA2) FY145_13355 PF00271 Helicase conserved C-terminal domain FY145_13355 PF08482 ATP-dependent helicase C-terminal FY145_13395 PF09382 RQC domain FY145_13395 PF00270 DEAD/DEAH box helicase FY145_13395 PF00271 Helicase conserved C-terminal domain FY145_13395 PF00570 HRDC domain FY145_13395 PF16124 RecQ zinc-binding FY145_13400 PF00480 ROK family FY145_13405 PF13407 Periplasmic binding protein domain FY145_13410 PF02653 Branched-chain amino acid transport system / permease component FY145_13415 PF00005 ABC transporter FY145_13420 PF00485 Phosphoribulokinase / Uridine kinase family FY145_13425 PF00462 Glutaredoxin FY145_13430 PF07972 NrdI Flavodoxin like FY145_13435 PF02867 Ribonucleotide reductase, barrel domain FY145_13435 PF00317 Ribonucleotide reductase, all-alpha domain FY145_13435 PF08343 Ribonucleotide reductase N-terminal FY145_13440 PF00268 Ribonucleotide reductase, small chain FY145_13450 PF02463 RecF/RecN/SMC N terminal domain FY145_13455 PF00581 Rhodanese-like domain FY145_13455 PF00899 ThiF family FY145_13470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_13470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_13480 PF00294 pfkB family carbohydrate kinase FY145_13490 PF05175 Methyltransferase small domain FY145_13490 PF08468 Methyltransferase small domain N-terminal FY145_13495 PF00013 KH domain FY145_13495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY145_13495 PF01138 3' exoribonuclease family, domain 1 FY145_13495 PF03725 3' exoribonuclease family, domain 2 FY145_13495 PF00575 S1 RNA binding domain FY145_13500 PF00312 Ribosomal protein S15 FY145_13505 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY145_13505 PF09157 Pseudouridine synthase II TruB, C-terminal FY145_13505 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY145_13510 PF02033 Ribosome-binding factor A FY145_13515 PF00009 Elongation factor Tu GTP binding domain FY145_13515 PF03144 Elongation factor Tu domain 2 FY145_13515 PF11987 Translation-initiation factor 2 FY145_13515 PF08364 Bacterial translation initiation factor IF-2 associated region FY145_13515 PF04760 Translation initiation factor IF-2, N-terminal region FY145_13525 PF13184 NusA-like KH domain FY145_13525 PF08529 NusA N-terminal domain FY145_13525 PF00575 S1 RNA binding domain FY145_13530 PF17384 RimP C-terminal SH3 domain FY145_13530 PF02576 RimP N-terminal domain FY145_13535 PF05977 Transmembrane secretion effector FY145_13545 PF13406 Transglycosylase SLT domain FY145_13550 PF02132 RecR protein FY145_13550 PF13662 Toprim domain FY145_13560 PF02575 YbaB/EbfC DNA-binding family FY145_13565 PF12169 DNA polymerase III subunits gamma and tau domain III FY145_13565 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY145_13565 PF12170 DNA polymerase III tau subunit V interacting with alpha FY145_13580 PF00293 NUDIX domain FY145_13580 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY145_13580 PF09297 NADH pyrophosphatase zinc ribbon domain FY145_13585 PF01817 Chorismate mutase type II FY145_13585 PF00800 Prephenate dehydratase FY145_13590 PF02348 Cytidylyltransferase FY145_13595 PF00034 Cytochrome c FY145_13600 PF02397 Bacterial sugar transferase FY145_13605 PF00905 Penicillin binding protein transpeptidase domain FY145_13605 PF00912 Transglycosylase FY145_13610 PF04073 Aminoacyl-tRNA editing domain FY145_13615 PF00313 'Cold-shock' DNA-binding domain FY145_13620 PF01546 Peptidase family M20/M25/M40 FY145_13620 PF07687 Peptidase dimerisation domain FY145_13625 PF01047 MarR family FY145_13630 PF01367 5'-3' exonuclease, C-terminal SAM fold FY145_13630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY145_13630 PF00476 DNA polymerase family A FY145_13630 PF01612 3'-5' exonuclease FY145_13635 PF01783 Ribosomal L32p protein family FY145_13640 PF02743 Cache domain FY145_13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_13640 PF00512 His Kinase A (phospho-acceptor) domain FY145_13645 PF00158 Sigma-54 interaction domain FY145_13645 PF00072 Response regulator receiver domain FY145_13645 PF02954 Bacterial regulatory protein, Fis family FY145_13650 PF03401 Tripartite tricarboxylate transporter family receptor FY145_13655 PF07331 Tripartite tricarboxylate transporter TctB family FY145_13660 PF01970 Tripartite tricarboxylate transporter TctA family FY145_13665 PF04102 SlyX FY145_13675 PF01556 DnaJ C terminal domain FY145_13675 PF00684 DnaJ central domain FY145_13675 PF00226 DnaJ domain FY145_13680 PF00012 Hsp70 protein FY145_13695 PF01625 Peptide methionine sulfoxide reductase FY145_13700 PF02608 ABC transporter substrate-binding protein PnrA-like FY145_13705 PF00005 ABC transporter FY145_13710 PF02653 Branched-chain amino acid transport system / permease component FY145_13715 PF02653 Branched-chain amino acid transport system / permease component FY145_13720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY145_13725 PF01048 Phosphorylase superfamily FY145_13730 PF01791 DeoC/LacD family aldolase FY145_13735 PF02885 Glycosyl transferase family, helical bundle domain FY145_13735 PF00591 Glycosyl transferase family, a/b domain FY145_13735 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY145_13750 PF00962 Adenosine/AMP deaminase FY145_13755 PF01676 Metalloenzyme superfamily FY145_13765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY145_13770 PF00510 Cytochrome c oxidase subunit III FY145_13775 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY145_13780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY145_13780 PF06481 COX Aromatic Rich Motif FY145_13785 PF00083 Sugar (and other) transporter FY145_13785 PF07690 Major Facilitator Superfamily FY145_13790 PF00310 Glutamine amidotransferases class-II FY145_13790 PF04898 Glutamate synthase central domain FY145_13790 PF01645 Conserved region in glutamate synthase FY145_13790 PF01493 GXGXG motif FY145_13795 PF00667 FAD binding domain FY145_13795 PF00258 Flavodoxin FY145_13795 PF00175 Oxidoreductase NAD-binding domain FY145_13815 PF02801 Beta-ketoacyl synthase, C-terminal domain FY145_13815 PF00109 Beta-ketoacyl synthase, N-terminal domain FY145_13820 PF07977 FabA-like domain FY145_13830 PF03458 UPF0126 domain FY145_13840 PF06912 Protein of unknown function (DUF1275) FY145_13850 PF00528 Binding-protein-dependent transport system inner membrane component FY145_13855 PF00005 ABC transporter FY145_13860 PF00392 Bacterial regulatory proteins, gntR family FY145_13860 PF07702 UTRA domain FY145_13865 PF01618 MotA/TolQ/ExbB proton channel family FY145_13870 PF02472 Biopolymer transport protein ExbD/TolR FY145_13880 PF02615 Malate/L-lactate dehydrogenase FY145_13895 PF00625 Guanylate kinase FY145_13900 PF07969 Amidohydrolase family FY145_13905 PF06299 Protein of unknown function (DUF1045) FY145_13910 PF00528 Binding-protein-dependent transport system inner membrane component FY145_13915 PF00528 Binding-protein-dependent transport system inner membrane component FY145_13925 PF00005 ABC transporter FY145_13935 PF00005 ABC transporter FY145_13940 PF00005 ABC transporter FY145_13945 PF06007 Phosphonate metabolism protein PhnJ FY145_13950 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY145_13955 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY145_13960 PF06754 Phosphonate metabolism protein PhnG FY145_13965 PF00392 Bacterial regulatory proteins, gntR family FY145_13965 PF07702 UTRA domain FY145_13970 PF05173 Dihydrodipicolinate reductase, C-terminus FY145_13970 PF01113 Dihydrodipicolinate reductase, N-terminus FY145_13975 PF02685 Glucokinase FY145_13980 PF02142 MGS-like domain FY145_13985 PF03411 Penicillin-insensitive murein endopeptidase FY145_13990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_13995 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14000 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_14000 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_14005 PF00005 ABC transporter FY145_14010 PF01266 FAD dependent oxidoreductase FY145_14015 PF00120 Glutamine synthetase, catalytic domain FY145_14020 PF01266 FAD dependent oxidoreductase FY145_14030 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14035 PF00005 ABC transporter FY145_14040 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14045 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY145_14055 PF02082 Transcriptional regulator FY145_14060 PF13416 Bacterial extracellular solute-binding protein FY145_14070 PF05987 Bacterial protein of unknown function (DUF898) FY145_14075 PF00171 Aldehyde dehydrogenase family FY145_14080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_14080 PF03466 LysR substrate binding domain FY145_14085 PF00892 EamA-like transporter family FY145_14100 PF00877 NlpC/P60 family FY145_14110 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY145_14110 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY145_14115 PF00883 Cytosol aminopeptidase family, catalytic domain FY145_14115 PF02789 Cytosol aminopeptidase family, N-terminal domain FY145_14135 PF00437 Type II/IV secretion system protein FY145_14150 PF04972 BON domain FY145_14150 PF00263 Bacterial type II and III secretion system protein FY145_14150 PF13629 Pilus formation protein N terminal region FY145_14190 PF00117 Glutamine amidotransferase class-I FY145_14195 PF07411 Domain of unknown function (DUF1508) FY145_14200 PF01183 Glycosyl hydrolases family 25 FY145_14205 PF00892 EamA-like transporter family FY145_14210 PF00155 Aminotransferase class I and II FY145_14210 PF00392 Bacterial regulatory proteins, gntR family FY145_14225 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_14240 PF03144 Elongation factor Tu domain 2 FY145_14240 PF06421 GTP-binding protein LepA C-terminus FY145_14240 PF00679 Elongation factor G C-terminus FY145_14240 PF00009 Elongation factor Tu GTP binding domain FY145_14245 PF00795 Carbon-nitrogen hydrolase FY145_14275 PF02311 AraC-like ligand binding domain FY145_14275 PF12833 Helix-turn-helix domain FY145_14280 PF03480 Bacterial extracellular solute-binding protein, family 7 FY145_14305 PF00707 Translation initiation factor IF-3, C-terminal domain FY145_14305 PF05198 Translation initiation factor IF-3, N-terminal domain FY145_14310 PF01632 Ribosomal protein L35 FY145_14315 PF00453 Ribosomal protein L20 FY145_14325 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY145_14325 PF01409 tRNA synthetases class II core domain (F) FY145_14330 PF03483 B3/4 domain FY145_14330 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY145_14330 PF03147 Ferredoxin-fold anticodon binding domain FY145_14330 PF01588 Putative tRNA binding domain FY145_14330 PF03484 tRNA synthetase B5 domain FY145_14335 PF00248 Aldo/keto reductase family FY145_14340 PF03466 LysR substrate binding domain FY145_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_14350 PF00248 Aldo/keto reductase family FY145_14355 PF01965 DJ-1/PfpI family FY145_14355 PF12833 Helix-turn-helix domain FY145_14365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_14365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_14380 PF02601 Exonuclease VII, large subunit FY145_14380 PF13742 OB-fold nucleic acid binding domain FY145_14385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_14385 PF13378 Enolase C-terminal domain-like FY145_14390 PF00392 Bacterial regulatory proteins, gntR family FY145_14390 PF07729 FCD domain FY145_14395 PF01047 MarR family FY145_14405 PF02073 Thermophilic metalloprotease (M29) FY145_14410 PF04073 Aminoacyl-tRNA editing domain FY145_14415 PF03960 ArsC family FY145_14430 PF00440 Bacterial regulatory proteins, tetR family FY145_14440 PF00958 GMP synthase C terminal domain FY145_14440 PF00117 Glutamine amidotransferase class-I FY145_14455 PF03073 TspO/MBR family FY145_14480 PF01189 16S rRNA methyltransferase RsmB/F FY145_14480 PF01029 NusB family FY145_14485 PF03330 Lytic transglycolase FY145_14495 PF08331 Domain of unknown function (DUF1730) FY145_14500 PF00043 Glutathione S-transferase, C-terminal domain FY145_14500 PF13417 Glutathione S-transferase, N-terminal domain FY145_14505 PF02673 Bacitracin resistance protein BacA FY145_14520 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY145_14530 PF13649 Methyltransferase domain FY145_14535 PF02768 DNA polymerase III beta subunit, C-terminal domain FY145_14535 PF02767 DNA polymerase III beta subunit, central domain FY145_14535 PF00712 DNA polymerase III beta subunit, N-terminal domain FY145_14540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_14545 PF02021 Uncharacterised protein family UPF0102 FY145_14550 PF14602 Hexapeptide repeat of succinyl-transferase FY145_14550 PF12464 Maltose acetyltransferase FY145_14555 PF13416 Bacterial extracellular solute-binding protein FY145_14560 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14565 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14570 PF00005 ABC transporter FY145_14580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY145_14580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY145_14585 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY145_14585 PF01078 Magnesium chelatase, subunit ChlI FY145_14590 PF00291 Pyridoxal-phosphate dependent enzyme FY145_14595 PF01810 LysE type translocator FY145_14600 PF00692 dUTPase FY145_14605 PF00009 Elongation factor Tu GTP binding domain FY145_14605 PF16658 Class II release factor RF3, C-terminal domain FY145_14605 PF03144 Elongation factor Tu domain 2 FY145_14610 PF04127 DNA / pantothenate metabolism flavoprotein FY145_14610 PF02441 Flavoprotein FY145_14625 PF03109 ABC1 family FY145_14630 PF01209 ubiE/COQ5 methyltransferase family FY145_14635 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY145_14635 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY145_14635 PF06827 Zinc finger found in FPG and IleRS FY145_14640 PF00378 Enoyl-CoA hydratase/isomerase FY145_14645 PF01649 Ribosomal protein S20 FY145_14655 PF13289 SIR2-like domain FY145_14685 PF00313 'Cold-shock' DNA-binding domain FY145_14705 PF13458 Periplasmic binding protein FY145_14710 PF02653 Branched-chain amino acid transport system / permease component FY145_14715 PF02653 Branched-chain amino acid transport system / permease component FY145_14720 PF00005 ABC transporter FY145_14720 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_14725 PF00005 ABC transporter FY145_14725 PF09383 NIL domain FY145_14730 PF00795 Carbon-nitrogen hydrolase FY145_14735 PF00465 Iron-containing alcohol dehydrogenase FY145_14740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_14745 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14750 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14750 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_14755 PF00005 ABC transporter FY145_14755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_14760 PF00455 DeoR C terminal sensor domain FY145_14760 PF08220 DeoR-like helix-turn-helix domain FY145_14765 PF01546 Peptidase family M20/M25/M40 FY145_14780 PF00459 Inositol monophosphatase family FY145_14785 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY145_14790 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY145_14795 PF00999 Sodium/hydrogen exchanger family FY145_14800 PF13649 Methyltransferase domain FY145_14810 PF01266 FAD dependent oxidoreductase FY145_14815 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_14815 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14820 PF00528 Binding-protein-dependent transport system inner membrane component FY145_14825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_14830 PF01266 FAD dependent oxidoreductase FY145_14835 PF00300 Histidine phosphatase superfamily (branch 1) FY145_14835 PF00106 short chain dehydrogenase FY145_14845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_14845 PF00005 ABC transporter FY145_14855 PF00990 Diguanylate cyclase, GGDEF domain FY145_14860 PF07690 Major Facilitator Superfamily FY145_14870 PF00578 AhpC/TSA family FY145_14870 PF02683 Cytochrome C biogenesis protein transmembrane region FY145_14870 PF17991 Thioredoxin like C-terminal domain FY145_14880 PF00561 alpha/beta hydrolase fold FY145_14885 PF00486 Transcriptional regulatory protein, C terminal FY145_14885 PF00072 Response regulator receiver domain FY145_14890 PF00672 HAMP domain FY145_14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_14890 PF00512 His Kinase A (phospho-acceptor) domain FY145_14895 PF02566 OsmC-like protein FY145_14900 PF00171 Aldehyde dehydrogenase family FY145_14905 PF06441 Epoxide hydrolase N terminus FY145_14915 PF00561 alpha/beta hydrolase fold FY145_14920 PF00210 Ferritin-like domain FY145_14925 PF00384 Molybdopterin oxidoreductase FY145_14930 PF00512 His Kinase A (phospho-acceptor) domain FY145_14930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_14930 PF13426 PAS domain FY145_14930 PF08448 PAS fold FY145_14930 PF00072 Response regulator receiver domain FY145_14935 PF00196 Bacterial regulatory proteins, luxR family FY145_14935 PF00072 Response regulator receiver domain FY145_14940 PF00072 Response regulator receiver domain FY145_14940 PF00196 Bacterial regulatory proteins, luxR family FY145_14955 PF01494 FAD binding domain FY145_14960 PF04199 Putative cyclase FY145_14965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY145_14970 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY145_14970 PF03480 Bacterial extracellular solute-binding protein, family 7 FY145_14980 PF09339 IclR helix-turn-helix domain FY145_14980 PF01614 Bacterial transcriptional regulator FY145_14990 PF00501 AMP-binding enzyme FY145_14990 PF13193 AMP-binding enzyme C-terminal domain FY145_15015 PF01037 Lrp/AsnC ligand binding domain FY145_15040 PF01594 AI-2E family transporter FY145_15055 PF13520 Amino acid permease FY145_15060 PF13520 Amino acid permease FY145_15065 PF00873 AcrB/AcrD/AcrF family FY145_15070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_15080 PF02308 MgtC family FY145_15085 PF01494 FAD binding domain FY145_15095 PF13460 NAD(P)H-binding FY145_15100 PF00873 AcrB/AcrD/AcrF family FY145_15105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_15105 PF00529 HlyD membrane-fusion protein of T1SS FY145_15110 PF00486 Transcriptional regulatory protein, C terminal FY145_15110 PF00072 Response regulator receiver domain FY145_15115 PF00989 PAS fold FY145_15115 PF00512 His Kinase A (phospho-acceptor) domain FY145_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_15115 PF16736 Single Cache-like FY145_15120 PF07690 Major Facilitator Superfamily FY145_15130 PF00860 Permease family FY145_15140 PF00144 Beta-lactamase FY145_15145 PF03466 LysR substrate binding domain FY145_15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_15185 PF01177 Asp/Glu/Hydantoin racemase FY145_15190 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15195 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15205 PF00005 ABC transporter FY145_15205 PF08402 TOBE domain FY145_15230 PF08447 PAS fold FY145_15230 PF13426 PAS domain FY145_15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_15240 PF13416 Bacterial extracellular solute-binding protein FY145_15245 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15250 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15255 PF17912 MalK OB fold domain FY145_15255 PF00005 ABC transporter FY145_15265 PF00296 Luciferase-like monooxygenase FY145_15270 PF09084 NMT1/THI5 like FY145_15275 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15280 PF00005 ABC transporter FY145_15285 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15290 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15300 PF17912 MalK OB fold domain FY145_15300 PF00005 ABC transporter FY145_15305 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY145_15320 PF00356 Bacterial regulatory proteins, lacI family FY145_15330 PF01842 ACT domain FY145_15330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_15330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_15335 PF01261 Xylose isomerase-like TIM barrel FY145_15340 PF03459 TOBE domain FY145_15340 PF00005 ABC transporter FY145_15340 PF17912 MalK OB fold domain FY145_15345 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15350 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15355 PF13416 Bacterial extracellular solute-binding protein FY145_15360 PF00440 Bacterial regulatory proteins, tetR family FY145_15360 PF17938 Tetracyclin repressor-like, C-terminal domain FY145_15365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_15365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_15380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_15380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_15385 PF00313 'Cold-shock' DNA-binding domain FY145_15395 PF01165 Ribosomal protein S21 FY145_15415 PF00550 Phosphopantetheine attachment site FY145_15420 PF07470 Glycosyl Hydrolase Family 88 FY145_15425 PF00295 Glycosyl hydrolases family 28 FY145_15435 PF08402 TOBE domain FY145_15435 PF00005 ABC transporter FY145_15440 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15445 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15450 PF02311 AraC-like ligand binding domain FY145_15450 PF12833 Helix-turn-helix domain FY145_15455 PF04909 Amidohydrolase FY145_15460 PF13378 Enolase C-terminal domain-like FY145_15460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_15465 PF00701 Dihydrodipicolinate synthetase family FY145_15475 PF04962 KduI/IolB family FY145_15480 PF01370 NAD dependent epimerase/dehydratase family FY145_15485 PF07729 FCD domain FY145_15485 PF00392 Bacterial regulatory proteins, gntR family FY145_15500 PF00248 Aldo/keto reductase family FY145_15505 PF17912 MalK OB fold domain FY145_15505 PF00005 ABC transporter FY145_15510 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15515 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15530 PF12833 Helix-turn-helix domain FY145_15530 PF02311 AraC-like ligand binding domain FY145_15535 PF07690 Major Facilitator Superfamily FY145_15540 PF00356 Bacterial regulatory proteins, lacI family FY145_15545 PF16912 Glucose dehydrogenase C-terminus FY145_15545 PF08240 Alcohol dehydrogenase GroES-like domain FY145_15560 PF00294 pfkB family carbohydrate kinase FY145_15565 PF08013 Tagatose 6 phosphate kinase FY145_15570 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15575 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15580 PF08402 TOBE domain FY145_15580 PF00005 ABC transporter FY145_15585 PF00005 ABC transporter FY145_15585 PF17912 MalK OB fold domain FY145_15590 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15595 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15600 PF01547 Bacterial extracellular solute-binding protein FY145_15605 PF01053 Cys/Met metabolism PLP-dependent enzyme FY145_15620 PF00583 Acetyltransferase (GNAT) family FY145_15625 PF01297 Zinc-uptake complex component A periplasmic FY145_15630 PF00950 ABC 3 transport family FY145_15635 PF00005 ABC transporter FY145_15640 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY145_15640 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY145_15655 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY145_15655 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY145_15660 PF13416 Bacterial extracellular solute-binding protein FY145_15665 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15670 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15675 PF00005 ABC transporter FY145_15675 PF08402 TOBE domain FY145_15685 PF03922 OmpW family FY145_15705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY145_15705 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY145_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_15710 PF03466 LysR substrate binding domain FY145_15715 PF13407 Periplasmic binding protein domain FY145_15720 PF02653 Branched-chain amino acid transport system / permease component FY145_15725 PF00005 ABC transporter FY145_15730 PF08361 MAATS-type transcriptional repressor, C-terminal region FY145_15730 PF00440 Bacterial regulatory proteins, tetR family FY145_15735 PF00873 AcrB/AcrD/AcrF family FY145_15740 PF00529 HlyD membrane-fusion protein of T1SS FY145_15740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_15745 PF17151 Periplasmic sensor domain FY145_15745 PF00990 Diguanylate cyclase, GGDEF domain FY145_15750 PF05899 Protein of unknown function (DUF861) FY145_15750 PF07883 Cupin domain FY145_15760 PF08448 PAS fold FY145_15760 PF08447 PAS fold FY145_15760 PF00990 Diguanylate cyclase, GGDEF domain FY145_15760 PF00563 EAL domain FY145_15765 PF02615 Malate/L-lactate dehydrogenase FY145_15770 PF01580 FtsK/SpoIIIE family FY145_15770 PF09397 Ftsk gamma domain FY145_15770 PF17854 FtsK alpha domain FY145_15770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY145_15775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_15780 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15785 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15790 PF00005 ABC transporter FY145_15790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_15795 PF00005 ABC transporter FY145_15795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_15800 PF00266 Aminotransferase class-V FY145_15810 PF12833 Helix-turn-helix domain FY145_15815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_15825 PF00920 Dehydratase family FY145_15830 PF13407 Periplasmic binding protein domain FY145_15835 PF00005 ABC transporter FY145_15840 PF02653 Branched-chain amino acid transport system / permease component FY145_15845 PF02653 Branched-chain amino acid transport system / permease component FY145_15850 PF00392 Bacterial regulatory proteins, gntR family FY145_15850 PF07729 FCD domain FY145_15855 PF07690 Major Facilitator Superfamily FY145_15865 PF13847 Methyltransferase domain FY145_15870 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY145_15870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY145_15870 PF14579 Helix-hairpin-helix motif FY145_15870 PF02811 PHP domain FY145_15870 PF01336 OB-fold nucleic acid binding domain FY145_15890 PF13660 Domain of unknown function (DUF4147) FY145_15890 PF05161 MOFRL family FY145_15900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_15900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_15910 PF00005 ABC transporter FY145_15910 PF03459 TOBE domain FY145_15910 PF17912 MalK OB fold domain FY145_15915 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15920 PF00528 Binding-protein-dependent transport system inner membrane component FY145_15925 PF01547 Bacterial extracellular solute-binding protein FY145_15935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_15945 PF01425 Amidase FY145_15950 PF00990 Diguanylate cyclase, GGDEF domain FY145_15950 PF08447 PAS fold FY145_15950 PF08448 PAS fold FY145_15950 PF00563 EAL domain FY145_15960 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_15965 PF03776 Septum formation topological specificity factor MinE FY145_15970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY145_15975 PF03775 Septum formation inhibitor MinC, C-terminal domain FY145_15975 PF05209 Septum formation inhibitor MinC, N-terminal domain FY145_15980 PF13419 Haloacid dehalogenase-like hydrolase FY145_15985 PF07729 FCD domain FY145_15985 PF00392 Bacterial regulatory proteins, gntR family FY145_15990 PF03480 Bacterial extracellular solute-binding protein, family 7 FY145_16000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY145_16005 PF00107 Zinc-binding dehydrogenase FY145_16005 PF08240 Alcohol dehydrogenase GroES-like domain FY145_16010 PF03786 D-mannonate dehydratase (UxuA) FY145_16020 PF00171 Aldehyde dehydrogenase family FY145_16030 PF03480 Bacterial extracellular solute-binding protein, family 7 FY145_16035 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY145_16035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY145_16040 PF00296 Luciferase-like monooxygenase FY145_16055 PF00043 Glutathione S-transferase, C-terminal domain FY145_16055 PF02798 Glutathione S-transferase, N-terminal domain FY145_16060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_16060 PF00005 ABC transporter FY145_16065 PF03841 L-seryl-tRNA selenium transferase FY145_16080 PF01979 Amidohydrolase family FY145_16085 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_16085 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16090 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_16100 PF00534 Glycosyl transferases group 1 FY145_16100 PF13439 Glycosyltransferase Family 4 FY145_16105 PF02563 Polysaccharide biosynthesis/export protein FY145_16110 PF13533 Biotin-lipoyl like FY145_16115 PF00873 AcrB/AcrD/AcrF family FY145_16130 PF01613 Flavin reductase like domain FY145_16135 PF00248 Aldo/keto reductase family FY145_16140 PF00296 Luciferase-like monooxygenase FY145_16145 PF00392 Bacterial regulatory proteins, gntR family FY145_16145 PF07702 UTRA domain FY145_16150 PF00005 ABC transporter FY145_16150 PF08402 TOBE domain FY145_16155 PF01547 Bacterial extracellular solute-binding protein FY145_16160 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16165 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16170 PF01055 Glycosyl hydrolases family 31 FY145_16180 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16185 PF09084 NMT1/THI5 like FY145_16190 PF02110 Hydroxyethylthiazole kinase family FY145_16195 PF02581 Thiamine monophosphate synthase FY145_16200 PF08543 Phosphomethylpyrimidine kinase FY145_16205 PF01037 Lrp/AsnC ligand binding domain FY145_16210 PF00842 Alanine racemase, C-terminal domain FY145_16210 PF01168 Alanine racemase, N-terminal domain FY145_16215 PF01266 FAD dependent oxidoreductase FY145_16230 PF00158 Sigma-54 interaction domain FY145_16230 PF02954 Bacterial regulatory protein, Fis family FY145_16230 PF00072 Response regulator receiver domain FY145_16235 PF02743 Cache domain FY145_16235 PF00512 His Kinase A (phospho-acceptor) domain FY145_16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_16240 PF00375 Sodium:dicarboxylate symporter family FY145_16245 PF00202 Aminotransferase class-III FY145_16260 PF01546 Peptidase family M20/M25/M40 FY145_16260 PF07687 Peptidase dimerisation domain FY145_16270 PF01270 Glycosyl hydrolases family 8 FY145_16280 PF03552 Cellulose synthase FY145_16280 PF00535 Glycosyl transferase family 2 FY145_16280 PF07238 PilZ domain FY145_16310 PF16363 GDP-mannose 4,6 dehydratase FY145_16315 PF01370 NAD dependent epimerase/dehydratase family FY145_16325 PF00072 Response regulator receiver domain FY145_16325 PF00196 Bacterial regulatory proteins, luxR family FY145_16340 PF00005 ABC transporter FY145_16340 PF00664 ABC transporter transmembrane region FY145_16345 PF00529 HlyD membrane-fusion protein of T1SS FY145_16360 PF02563 Polysaccharide biosynthesis/export protein FY145_16365 PF02397 Bacterial sugar transferase FY145_16375 PF00202 Aminotransferase class-III FY145_16380 PF00672 HAMP domain FY145_16380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_16385 PF17969 L,D-transpeptidase C-terminal domain FY145_16385 PF03734 L,D-transpeptidase catalytic domain FY145_16405 PF02245 Methylpurine-DNA glycosylase (MPG) FY145_16420 PF00356 Bacterial regulatory proteins, lacI family FY145_16425 PF01547 Bacterial extracellular solute-binding protein FY145_16430 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16435 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16440 PF17912 MalK OB fold domain FY145_16440 PF00005 ABC transporter FY145_16440 PF03459 TOBE domain FY145_16450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_16450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_16455 PF04055 Radical SAM superfamily FY145_16460 PF01242 6-pyruvoyl tetrahydropterin synthase FY145_16465 PF06508 Queuosine biosynthesis protein QueC FY145_16470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_16470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_16480 PF00005 ABC transporter FY145_16480 PF17912 MalK OB fold domain FY145_16485 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16490 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16495 PF01547 Bacterial extracellular solute-binding protein FY145_16505 PF01050 Mannose-6-phosphate isomerase FY145_16505 PF00483 Nucleotidyl transferase FY145_16510 PF01011 PQQ enzyme repeat FY145_16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_16515 PF03466 LysR substrate binding domain FY145_16520 PF01515 Phosphate acetyl/butaryl transferase FY145_16520 PF03949 Malic enzyme, NAD binding domain FY145_16520 PF00390 Malic enzyme, N-terminal domain FY145_16525 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_16530 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16535 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16540 PF00005 ABC transporter FY145_16545 PF03972 MmgE/PrpD family FY145_16550 PF00296 Luciferase-like monooxygenase FY145_16555 PF13426 PAS domain FY145_16555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_16555 PF08447 PAS fold FY145_16560 PF01266 FAD dependent oxidoreductase FY145_16575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY145_16580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY145_16585 PF03480 Bacterial extracellular solute-binding protein, family 7 FY145_16590 PF07722 Peptidase C26 FY145_16595 PF02653 Branched-chain amino acid transport system / permease component FY145_16600 PF00005 ABC transporter FY145_16605 PF13407 Periplasmic binding protein domain FY145_16615 PF01546 Peptidase family M20/M25/M40 FY145_16620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_16630 PF00005 ABC transporter FY145_16630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_16635 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_16635 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16640 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_16645 PF03466 LysR substrate binding domain FY145_16650 PF01112 Asparaginase FY145_16665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_16680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_16680 PF00005 ABC transporter FY145_16685 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_16685 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16690 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16695 PF00196 Bacterial regulatory proteins, luxR family FY145_16695 PF00072 Response regulator receiver domain FY145_16700 PF03737 Aldolase/RraA FY145_16705 PF01370 NAD dependent epimerase/dehydratase family FY145_16710 PF00920 Dehydratase family FY145_16715 PF17912 MalK OB fold domain FY145_16715 PF00005 ABC transporter FY145_16715 PF03459 TOBE domain FY145_16720 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16725 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_16735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_16740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_16740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_16745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_16745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_16750 PF00392 Bacterial regulatory proteins, gntR family FY145_16750 PF07729 FCD domain FY145_16760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_16760 PF00529 HlyD membrane-fusion protein of T1SS FY145_16765 PF00664 ABC transporter transmembrane region FY145_16765 PF00005 ABC transporter FY145_16785 PF12680 SnoaL-like domain FY145_16785 PF04542 Sigma-70 region 2 FY145_16785 PF08281 Sigma-70, region 4 FY145_16790 PF00005 ABC transporter FY145_16795 PF01032 FecCD transport family FY145_16810 PF01209 ubiE/COQ5 methyltransferase family FY145_16815 PF00127 Copper binding proteins, plastocyanin/azurin family FY145_16820 PF00005 ABC transporter FY145_16825 PF01032 FecCD transport family FY145_16840 PF07687 Peptidase dimerisation domain FY145_16840 PF01546 Peptidase family M20/M25/M40 FY145_16845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_16860 PF01968 Hydantoinase/oxoprolinase FY145_16860 PF05378 Hydantoinase/oxoprolinase N-terminal region FY145_16870 PF00171 Aldehyde dehydrogenase family FY145_16875 PF00180 Isocitrate/isopropylmalate dehydrogenase FY145_16880 PF00171 Aldehyde dehydrogenase family FY145_16885 PF01266 FAD dependent oxidoreductase FY145_16900 PF00202 Aminotransferase class-III FY145_16910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_16915 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16920 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_16920 PF00528 Binding-protein-dependent transport system inner membrane component FY145_16925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_16925 PF00005 ABC transporter FY145_16930 PF01037 Lrp/AsnC ligand binding domain FY145_16935 PF01266 FAD dependent oxidoreductase FY145_16940 PF01266 FAD dependent oxidoreductase FY145_16945 PF04324 BFD-like [2Fe-2S] binding domain FY145_16945 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_16955 PF03466 LysR substrate binding domain FY145_16965 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_16970 PF00005 ABC transporter FY145_16980 PF07687 Peptidase dimerisation domain FY145_16980 PF01546 Peptidase family M20/M25/M40 FY145_16985 PF00296 Luciferase-like monooxygenase FY145_16990 PF00296 Luciferase-like monooxygenase FY145_16995 PF02082 Transcriptional regulator FY145_17005 PF01613 Flavin reductase like domain FY145_17010 PF00296 Luciferase-like monooxygenase FY145_17025 PF00581 Rhodanese-like domain FY145_17035 PF00296 Luciferase-like monooxygenase FY145_17040 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_17040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_17040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_17050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_17055 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17060 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_17065 PF00005 ABC transporter FY145_17070 PF00005 ABC transporter FY145_17070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_17075 PF00248 Aldo/keto reductase family FY145_17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_17085 PF03466 LysR substrate binding domain FY145_17090 PF00296 Luciferase-like monooxygenase FY145_17095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_17110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_17115 PF01546 Peptidase family M20/M25/M40 FY145_17115 PF07687 Peptidase dimerisation domain FY145_17120 PF00296 Luciferase-like monooxygenase FY145_17125 PF05368 NmrA-like family FY145_17135 PF00296 Luciferase-like monooxygenase FY145_17140 PF00296 Luciferase-like monooxygenase FY145_17150 PF01638 HxlR-like helix-turn-helix FY145_17155 PF00106 short chain dehydrogenase FY145_17160 PF13378 Enolase C-terminal domain-like FY145_17160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_17170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_17290 PF03237 Terminase-like family FY145_17295 PF06074 Protein of unknown function (DUF935) FY145_17300 PF04233 Phage Mu protein F like protein FY145_17430 PF00005 ABC transporter FY145_17430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_17435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_17435 PF00005 ABC transporter FY145_17440 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17440 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_17445 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17455 PF07729 FCD domain FY145_17455 PF00392 Bacterial regulatory proteins, gntR family FY145_17465 PF00561 alpha/beta hydrolase fold FY145_17470 PF00106 short chain dehydrogenase FY145_17480 PF04273 Putative phosphatase (DUF442) FY145_17480 PF00753 Metallo-beta-lactamase superfamily FY145_17490 PF04143 Sulphur transport FY145_17500 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY145_17500 PF01676 Metalloenzyme superfamily FY145_17505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY145_17505 PF00364 Biotin-requiring enzyme FY145_17505 PF02817 e3 binding domain FY145_17510 PF02779 Transketolase, pyrimidine binding domain FY145_17510 PF02780 Transketolase, C-terminal domain FY145_17515 PF00676 Dehydrogenase E1 component FY145_17515 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY145_17520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_17520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_17520 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_17525 PF00108 Thiolase, N-terminal domain FY145_17525 PF02803 Thiolase, C-terminal domain FY145_17530 PF01037 Lrp/AsnC ligand binding domain FY145_17535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_17535 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_17535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_17540 PF01039 Carboxyl transferase domain FY145_17545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_17545 PF00289 Biotin carboxylase, N-terminal domain FY145_17545 PF00364 Biotin-requiring enzyme FY145_17545 PF02785 Biotin carboxylase C-terminal domain FY145_17550 PF00682 HMGL-like FY145_17560 PF02569 Pantoate-beta-alanine ligase FY145_17565 PF02548 Ketopantoate hydroxymethyltransferase FY145_17570 PF01261 Xylose isomerase-like TIM barrel FY145_17575 PF00596 Class II Aldolase and Adducin N-terminal domain FY145_17580 PF00455 DeoR C terminal sensor domain FY145_17580 PF08220 DeoR-like helix-turn-helix domain FY145_17585 PF13407 Periplasmic binding protein domain FY145_17590 PF00005 ABC transporter FY145_17595 PF02653 Branched-chain amino acid transport system / permease component FY145_17600 PF02653 Branched-chain amino acid transport system / permease component FY145_17605 PF05336 L-rhamnose mutarotase FY145_17615 PF00561 alpha/beta hydrolase fold FY145_17625 PF08447 PAS fold FY145_17625 PF08448 PAS fold FY145_17625 PF00990 Diguanylate cyclase, GGDEF domain FY145_17625 PF00563 EAL domain FY145_17635 PF00171 Aldehyde dehydrogenase family FY145_17640 PF08713 DNA alkylation repair enzyme FY145_17645 PF00005 ABC transporter FY145_17650 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17655 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17665 PF00378 Enoyl-CoA hydratase/isomerase FY145_17680 PF08241 Methyltransferase domain FY145_17690 PF00795 Carbon-nitrogen hydrolase FY145_17695 PF00462 Glutaredoxin FY145_17705 PF08241 Methyltransferase domain FY145_17720 PF00293 NUDIX domain FY145_17725 PF00583 Acetyltransferase (GNAT) family FY145_17725 PF13508 Acetyltransferase (GNAT) domain FY145_17730 PF01960 ArgJ family FY145_17740 PF02810 SEC-C motif FY145_17740 PF01043 SecA preprotein cross-linking domain FY145_17740 PF07516 SecA Wing and Scaffold domain FY145_17740 PF07517 SecA DEAD-like domain FY145_17745 PF00892 EamA-like transporter family FY145_17750 PF01757 Acyltransferase family FY145_17810 PF01943 Polysaccharide biosynthesis protein FY145_17825 PF01757 Acyltransferase family FY145_17835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY145_17835 PF13807 G-rich domain on putative tyrosine kinase FY145_17835 PF02706 Chain length determinant protein FY145_17855 PF00534 Glycosyl transferases group 1 FY145_17855 PF13439 Glycosyltransferase Family 4 FY145_17860 PF13439 Glycosyltransferase Family 4 FY145_17860 PF00534 Glycosyl transferases group 1 FY145_17875 PF03449 Transcription elongation factor, N-terminal FY145_17875 PF01272 Transcription elongation factor, GreA/GreB, C-term FY145_17880 PF00722 Glycosyl hydrolases family 16 FY145_17880 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY145_17890 PF03009 Glycerophosphoryl diester phosphodiesterase family FY145_17895 PF17912 MalK OB fold domain FY145_17895 PF03459 TOBE domain FY145_17895 PF00005 ABC transporter FY145_17900 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17905 PF00528 Binding-protein-dependent transport system inner membrane component FY145_17915 PF00480 ROK family FY145_17915 PF01047 MarR family FY145_17940 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY145_17955 PF01381 Helix-turn-helix FY145_17965 PF01717 Cobalamin-independent synthase, Catalytic domain FY145_17965 PF08267 Cobalamin-independent synthase, N-terminal domain FY145_17970 PF00005 ABC transporter FY145_17975 PF02653 Branched-chain amino acid transport system / permease component FY145_17980 PF13407 Periplasmic binding protein domain FY145_17990 PF01266 FAD dependent oxidoreductase FY145_17990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY145_18000 PF02310 B12 binding domain FY145_18000 PF01642 Methylmalonyl-CoA mutase FY145_18005 PF00289 Biotin carboxylase, N-terminal domain FY145_18005 PF00364 Biotin-requiring enzyme FY145_18005 PF02785 Biotin carboxylase C-terminal domain FY145_18005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_18005 PF18140 Propionyl-coenzyme A carboxylase BT domain FY145_18020 PF02798 Glutathione S-transferase, N-terminal domain FY145_18025 PF01039 Carboxyl transferase domain FY145_18030 PF01381 Helix-turn-helix FY145_18030 PF09856 Predicted transcriptional regulator (DUF2083) FY145_18030 PF06114 IrrE N-terminal-like domain FY145_18035 PF02805 Metal binding domain of Ada FY145_18035 PF06029 AlkA N-terminal domain FY145_18035 PF12833 Helix-turn-helix domain FY145_18035 PF00730 HhH-GPD superfamily base excision DNA repair protein FY145_18040 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY145_18050 PF00106 short chain dehydrogenase FY145_18060 PF01923 Cobalamin adenosyltransferase FY145_18070 PF01012 Electron transfer flavoprotein domain FY145_18075 PF01012 Electron transfer flavoprotein domain FY145_18075 PF00766 Electron transfer flavoprotein FAD-binding domain FY145_18080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY145_18080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY145_18090 PF08534 Redoxin FY145_18095 PF14698 Argininosuccinate lyase C-terminal FY145_18095 PF00206 Lyase FY145_18105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY145_18105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY145_18115 PF00072 Response regulator receiver domain FY145_18120 PF00156 Phosphoribosyl transferase domain FY145_18130 PF00005 ABC transporter FY145_18150 PF04752 ChaC-like protein FY145_18160 PF02153 Prephenate dehydrogenase FY145_18165 PF00155 Aminotransferase class I and II FY145_18170 PF01209 ubiE/COQ5 methyltransferase family FY145_18175 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY145_18175 PF00753 Metallo-beta-lactamase superfamily FY145_18195 PF00830 Ribosomal L28 family FY145_18200 PF02592 Putative vitamin uptake transporter FY145_18215 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY145_18215 PF06213 Cobalamin biosynthesis protein CobT FY145_18220 PF12556 Cobaltochelatase CobS subunit N terminal FY145_18220 PF07728 AAA domain (dynein-related subfamily) FY145_18220 PF08406 CbbQ/NirQ/NorQ C-terminal FY145_18225 PF00226 DnaJ domain FY145_18230 PF01722 BolA-like protein FY145_18240 PF01761 3-dehydroquinate synthase FY145_18245 PF01202 Shikimate kinase FY145_18255 PF02899 Phage integrase, N-terminal SAM-like domain FY145_18255 PF00589 Phage integrase family FY145_18260 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY145_18265 PF03734 L,D-transpeptidase catalytic domain FY145_18270 PF01206 Sulfurtransferase TusA FY145_18270 PF00581 Rhodanese-like domain FY145_18275 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY145_18275 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY145_18280 PF00768 D-alanyl-D-alanine carboxypeptidase FY145_18280 PF07943 Penicillin-binding protein 5, C-terminal domain FY145_18285 PF07687 Peptidase dimerisation domain FY145_18285 PF01546 Peptidase family M20/M25/M40 FY145_18295 PF06832 Penicillin-Binding Protein C-terminus Family FY145_18295 PF00912 Transglycosylase FY145_18295 PF00905 Penicillin binding protein transpeptidase domain FY145_18300 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY145_18300 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY145_18300 PF17962 Bacterial macroglobulin domain 6 FY145_18300 PF01835 MG2 domain FY145_18300 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY145_18300 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY145_18300 PF07703 Alpha-2-macroglobulin bait region domain FY145_18300 PF07678 A-macroglobulin TED domain FY145_18300 PF00207 Alpha-2-macroglobulin family FY145_18305 PF03966 Trm112p-like protein FY145_18315 PF00085 Thioredoxin FY145_18350 PF01842 ACT domain FY145_18350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_18350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_18360 PF13505 Outer membrane protein beta-barrel domain FY145_18365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY145_18365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY145_18365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY145_18365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY145_18370 PF17862 AAA+ lid domain FY145_18370 PF01434 Peptidase family M41 FY145_18370 PF00004 ATPase family associated with various cellular activities (AAA) FY145_18370 PF06480 FtsH Extracellular FY145_18375 PF01171 PP-loop family FY145_18385 PF00691 OmpA family FY145_18390 PF04052 TolB amino-terminal domain FY145_18390 PF07676 WD40-like Beta Propeller Repeat FY145_18400 PF02472 Biopolymer transport protein ExbD/TolR FY145_18405 PF01618 MotA/TolQ/ExbB proton channel family FY145_18410 PF03061 Thioesterase superfamily FY145_18415 PF00293 NUDIX domain FY145_18420 PF00293 NUDIX domain FY145_18435 PF17864 RuvB AAA lid domain FY145_18435 PF05491 RuvB C-terminal winged helix domain FY145_18435 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY145_18440 PF01330 RuvA N terminal domain FY145_18440 PF07499 RuvA, C-terminal domain FY145_18445 PF02075 Crossover junction endodeoxyribonuclease RuvC FY145_18450 PF00672 HAMP domain FY145_18450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_18455 PF00296 Luciferase-like monooxygenase FY145_18460 PF01709 Transcriptional regulator FY145_18475 PF13277 YmdB-like protein FY145_18485 PF00571 CBS domain FY145_18485 PF03471 Transporter associated domain FY145_18485 PF01595 Cyclin M transmembrane N-terminal domain FY145_18505 PF02780 Transketolase, C-terminal domain FY145_18505 PF02779 Transketolase, pyrimidine binding domain FY145_18505 PF00456 Transketolase, thiamine diphosphate binding domain FY145_18510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY145_18510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY145_18520 PF03471 Transporter associated domain FY145_18520 PF00999 Sodium/hydrogen exchanger family FY145_18525 PF00162 Phosphoglycerate kinase FY145_18530 PF00274 Fructose-bisphosphate aldolase class-I FY145_18550 PF01197 Ribosomal protein L31 FY145_18555 PF00005 ABC transporter FY145_18555 PF00664 ABC transporter transmembrane region FY145_18560 PF00890 FAD binding domain FY145_18565 PF01389 OmpA-like transmembrane domain FY145_18565 PF00691 OmpA family FY145_18575 PF00459 Inositol monophosphatase family FY145_18605 PF00731 AIR carboxylase FY145_18610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY145_18610 PF02222 ATP-grasp domain FY145_18615 PF00444 Ribosomal protein L36 FY145_18625 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY145_18645 PF00224 Pyruvate kinase, barrel domain FY145_18645 PF02887 Pyruvate kinase, alpha/beta domain FY145_18650 PF05951 Bacterial protein of unknown function (DUF882) FY145_18655 PF00158 Sigma-54 interaction domain FY145_18655 PF02954 Bacterial regulatory protein, Fis family FY145_18655 PF00072 Response regulator receiver domain FY145_18660 PF01432 Peptidase family M3 FY145_18660 PF08439 Oligopeptidase F FY145_18665 PF01063 Amino-transferase class IV FY145_18670 PF00990 Diguanylate cyclase, GGDEF domain FY145_18675 PF03435 Saccharopine dehydrogenase NADP binding domain FY145_18675 PF16653 Saccharopine dehydrogenase C-terminal domain FY145_18685 PF00149 Calcineurin-like phosphoesterase FY145_18685 PF02872 5'-nucleotidase, C-terminal domain FY145_18690 PF00762 Ferrochelatase FY145_18695 PF01145 SPFH domain / Band 7 family FY145_18695 PF16200 C-terminal region of band_7 FY145_18705 PF00571 CBS domain FY145_18705 PF01380 SIS domain FY145_18720 PF00483 Nucleotidyl transferase FY145_18725 PF13406 Transglycosylase SLT domain FY145_18735 PF00486 Transcriptional regulatory protein, C terminal FY145_18735 PF00072 Response regulator receiver domain FY145_18740 PF00512 His Kinase A (phospho-acceptor) domain FY145_18740 PF00672 HAMP domain FY145_18740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_18745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY145_18745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_18755 PF01493 GXGXG motif FY145_18755 PF01645 Conserved region in glutamate synthase FY145_18755 PF04898 Glutamate synthase central domain FY145_18755 PF00310 Glutamine amidotransferases class-II FY145_18760 PF01212 Beta-eliminating lyase FY145_18765 PF00486 Transcriptional regulatory protein, C terminal FY145_18765 PF00072 Response regulator receiver domain FY145_18770 PF13492 GAF domain FY145_18770 PF00512 His Kinase A (phospho-acceptor) domain FY145_18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_18770 PF02702 Osmosensitive K+ channel His kinase sensor domain FY145_18770 PF13493 Domain of unknown function (DUF4118) FY145_18775 PF02669 K+-transporting ATPase, c chain FY145_18785 PF03814 Potassium-transporting ATPase A subunit FY145_18795 PF00710 Asparaginase, N-terminal FY145_18795 PF17763 Glutaminase/Asparaginase C-terminal domain FY145_18800 PF00324 Amino acid permease FY145_18805 PF00206 Lyase FY145_18805 PF10415 Fumarase C C-terminus FY145_18810 PF00392 Bacterial regulatory proteins, gntR family FY145_18810 PF07729 FCD domain FY145_18815 PF00873 AcrB/AcrD/AcrF family FY145_18825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_18825 PF00529 HlyD membrane-fusion protein of T1SS FY145_18835 PF07702 UTRA domain FY145_18835 PF00392 Bacterial regulatory proteins, gntR family FY145_18850 PF00528 Binding-protein-dependent transport system inner membrane component FY145_18855 PF00571 CBS domain FY145_18855 PF00005 ABC transporter FY145_18860 PF00221 Aromatic amino acid lyase FY145_18865 PF00356 Bacterial regulatory proteins, lacI family FY145_18875 PF02653 Branched-chain amino acid transport system / permease component FY145_18880 PF00005 ABC transporter FY145_18885 PF01261 Xylose isomerase-like TIM barrel FY145_18890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_18890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_18895 PF01261 Xylose isomerase-like TIM barrel FY145_18900 PF01261 Xylose isomerase-like TIM barrel FY145_18920 PF02796 Helix-turn-helix domain of resolvase FY145_18920 PF00239 Resolvase, N terminal domain FY145_18930 PF00145 C-5 cytosine-specific DNA methylase FY145_18965 PF00701 Dihydrodipicolinate synthetase family FY145_18970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_18970 PF00005 ABC transporter FY145_18975 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_18975 PF00528 Binding-protein-dependent transport system inner membrane component FY145_18980 PF00528 Binding-protein-dependent transport system inner membrane component FY145_18985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_18995 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY145_19000 PF00465 Iron-containing alcohol dehydrogenase FY145_19005 PF07729 FCD domain FY145_19005 PF00392 Bacterial regulatory proteins, gntR family FY145_19020 PF03061 Thioesterase superfamily FY145_19040 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY145_19040 PF14403 Circularly permuted ATP-grasp type 2 FY145_19045 PF01841 Transglutaminase-like superfamily FY145_19045 PF08379 Bacterial transglutaminase-like N-terminal region FY145_19055 PF12848 ABC transporter FY145_19055 PF00005 ABC transporter FY145_19060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_19060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_19065 PF07729 FCD domain FY145_19065 PF00392 Bacterial regulatory proteins, gntR family FY145_19080 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19085 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19090 PF07470 Glycosyl Hydrolase Family 88 FY145_19095 PF03459 TOBE domain FY145_19095 PF00005 ABC transporter FY145_19095 PF17912 MalK OB fold domain FY145_19105 PF01547 Bacterial extracellular solute-binding protein FY145_19115 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY145_19115 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_19115 PF14602 Hexapeptide repeat of succinyl-transferase FY145_19120 PF01070 FMN-dependent dehydrogenase FY145_19135 PF08240 Alcohol dehydrogenase GroES-like domain FY145_19135 PF00107 Zinc-binding dehydrogenase FY145_19140 PF03737 Aldolase/RraA FY145_19145 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_19150 PF00005 ABC transporter FY145_19155 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19160 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19165 PF00106 short chain dehydrogenase FY145_19170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_19170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_19180 PF01370 NAD dependent epimerase/dehydratase family FY145_19185 PF01970 Tripartite tricarboxylate transporter TctA family FY145_19195 PF03737 Aldolase/RraA FY145_19200 PF03401 Tripartite tricarboxylate transporter family receptor FY145_19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_19205 PF03466 LysR substrate binding domain FY145_19210 PF00892 EamA-like transporter family FY145_19215 PF00892 EamA-like transporter family FY145_19220 PF00364 Biotin-requiring enzyme FY145_19225 PF00289 Biotin carboxylase, N-terminal domain FY145_19225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_19225 PF02785 Biotin carboxylase C-terminal domain FY145_19235 PF02682 Carboxyltransferase domain, subdomain C and D FY145_19240 PF02626 Carboxyltransferase domain, subdomain A and B FY145_19245 PF03746 LamB/YcsF family FY145_19250 PF08402 TOBE domain FY145_19250 PF00005 ABC transporter FY145_19260 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19265 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19270 PF00155 Aminotransferase class I and II FY145_19275 PF00300 Histidine phosphatase superfamily (branch 1) FY145_19275 PF00106 short chain dehydrogenase FY145_19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_19280 PF03466 LysR substrate binding domain FY145_19285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_19285 PF00672 HAMP domain FY145_19290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY145_19290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY145_19295 PF01791 DeoC/LacD family aldolase FY145_19300 PF01266 FAD dependent oxidoreductase FY145_19300 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY145_19305 PF00248 Aldo/keto reductase family FY145_19315 PF02653 Branched-chain amino acid transport system / permease component FY145_19320 PF00005 ABC transporter FY145_19325 PF13407 Periplasmic binding protein domain FY145_19345 PF00072 Response regulator receiver domain FY145_19355 PF00459 Inositol monophosphatase family FY145_19370 PF00011 Hsp20/alpha crystallin family FY145_19375 PF13593 SBF-like CPA transporter family (DUF4137) FY145_19380 PF03466 LysR substrate binding domain FY145_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_19385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY145_19385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY145_19400 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19405 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19410 PF17912 MalK OB fold domain FY145_19410 PF00005 ABC transporter FY145_19415 PF17912 MalK OB fold domain FY145_19415 PF00005 ABC transporter FY145_19420 PF01266 FAD dependent oxidoreductase FY145_19420 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY145_19425 PF00455 DeoR C terminal sensor domain FY145_19425 PF08220 DeoR-like helix-turn-helix domain FY145_19430 PF14824 Sirohaem biosynthesis protein central FY145_19430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY145_19430 PF10414 Sirohaem synthase dimerisation region FY145_19435 PF00384 Molybdopterin oxidoreductase FY145_19435 PF04324 BFD-like [2Fe-2S] binding domain FY145_19435 PF01568 Molydopterin dinucleotide binding domain FY145_19435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY145_19445 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY145_19445 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_19445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY145_19445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY145_19445 PF04324 BFD-like [2Fe-2S] binding domain FY145_19450 PF00005 ABC transporter FY145_19455 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19470 PF08376 Nitrate and nitrite sensing FY145_19470 PF03861 ANTAR domain FY145_19475 PF00392 Bacterial regulatory proteins, gntR family FY145_19475 PF07729 FCD domain FY145_19480 PF01566 Natural resistance-associated macrophage protein FY145_19485 PF03746 LamB/YcsF family FY145_19490 PF07286 Protein of unknown function (DUF1445) FY145_19495 PF02682 Carboxyltransferase domain, subdomain C and D FY145_19500 PF02785 Biotin carboxylase C-terminal domain FY145_19500 PF00364 Biotin-requiring enzyme FY145_19500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_19500 PF00289 Biotin carboxylase, N-terminal domain FY145_19505 PF00128 Alpha amylase, catalytic domain FY145_19505 PF02806 Alpha amylase, C-terminal all-beta domain FY145_19510 PF09278 MerR, DNA binding FY145_19510 PF00376 MerR family regulatory protein FY145_19515 PF00593 TonB dependent receptor FY145_19515 PF07715 TonB-dependent Receptor Plug Domain FY145_19520 PF02885 Glycosyl transferase family, helical bundle domain FY145_19520 PF00591 Glycosyl transferase family, a/b domain FY145_19525 PF06772 Bacterial low temperature requirement A protein (LtrA) FY145_19540 PF03428 Replication protein C N-terminal domain FY145_19540 PF11800 Replication protein C C-terminal region FY145_19545 PF02195 ParB-like nuclease domain FY145_19545 PF07506 RepB plasmid partitioning protein FY145_19550 PF13614 AAA domain FY145_19560 PF01042 Endoribonuclease L-PSP FY145_19565 PF14031 Putative serine dehydratase domain FY145_19565 PF01168 Alanine racemase, N-terminal domain FY145_19570 PF07171 MlrC C-terminus FY145_19570 PF07364 Metallopeptidase family M81 FY145_19575 PF05962 HutD FY145_19580 PF01175 Urocanase Rossmann-like domain FY145_19580 PF17392 Urocanase C-terminal domain FY145_19580 PF17391 Urocanase N-terminal domain FY145_19590 PF00221 Aromatic amino acid lyase FY145_19595 PF01979 Amidohydrolase family FY145_19600 PF01979 Amidohydrolase family FY145_19640 PF00005 ABC transporter FY145_19640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_19645 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_19645 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19650 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_19660 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19665 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19680 PF13533 Biotin-lipoyl like FY145_19695 PF02311 AraC-like ligand binding domain FY145_19695 PF12833 Helix-turn-helix domain FY145_19700 PF00440 Bacterial regulatory proteins, tetR family FY145_19730 PF01047 MarR family FY145_19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_19735 PF03466 LysR substrate binding domain FY145_19740 PF04303 PrpF protein FY145_19750 PF00005 ABC transporter FY145_19755 PF00528 Binding-protein-dependent transport system inner membrane component FY145_19770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_19770 PF00672 HAMP domain FY145_19780 PF03275 UDP-galactopyranose mutase FY145_19790 PF00535 Glycosyl transferase family 2 FY145_19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_19800 PF03466 LysR substrate binding domain FY145_19805 PF07690 Major Facilitator Superfamily FY145_19815 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY145_19820 PF03466 LysR substrate binding domain FY145_19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_19825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_19840 PF07969 Amidohydrolase family FY145_19860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_19860 PF03466 LysR substrate binding domain FY145_19865 PF07690 Major Facilitator Superfamily FY145_19875 PF00672 HAMP domain FY145_19875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_19875 PF00512 His Kinase A (phospho-acceptor) domain FY145_19880 PF00072 Response regulator receiver domain FY145_19880 PF00486 Transcriptional regulatory protein, C terminal FY145_19885 PF01569 PAP2 superfamily FY145_19930 PF13673 Acetyltransferase (GNAT) domain FY145_19935 PF06968 Biotin and Thiamin Synthesis associated domain FY145_19935 PF04055 Radical SAM superfamily FY145_19940 PF00155 Aminotransferase class I and II FY145_19950 PF00202 Aminotransferase class-III FY145_19955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY145_19955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY145_19970 PF00491 Arginase family FY145_19980 PF00892 EamA-like transporter family FY145_19985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_19985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_19995 PF00211 Adenylate and Guanylate cyclase catalytic domain FY145_19995 PF00672 HAMP domain FY145_20005 PF07756 Protein of unknown function (DUF1612) FY145_20005 PF11972 HTH DNA binding domain FY145_20010 PF00083 Sugar (and other) transporter FY145_20015 PF00512 His Kinase A (phospho-acceptor) domain FY145_20015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_20020 PF00072 Response regulator receiver domain FY145_20020 PF00486 Transcriptional regulatory protein, C terminal FY145_20025 PF08019 Phosphoethanolamine transferase EptA/EptB FY145_20025 PF00884 Sulfatase FY145_20035 PF03466 LysR substrate binding domain FY145_20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_20040 PF07715 TonB-dependent Receptor Plug Domain FY145_20040 PF00593 TonB dependent receptor FY145_20050 PF01032 FecCD transport family FY145_20055 PF00005 ABC transporter FY145_20065 PF00034 Cytochrome c FY145_20070 PF02631 RecX family FY145_20075 PF08450 SMP-30/Gluconolactonase/LRE-like region FY145_20085 PF02653 Branched-chain amino acid transport system / permease component FY145_20090 PF00005 ABC transporter FY145_20095 PF13407 Periplasmic binding protein domain FY145_20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_20100 PF07730 Histidine kinase FY145_20105 PF00196 Bacterial regulatory proteins, luxR family FY145_20105 PF00072 Response regulator receiver domain FY145_20115 PF07995 Glucose / Sorbosone dehydrogenase FY145_20125 PF04445 Putative SAM-dependent methyltransferase FY145_20130 PF00849 RNA pseudouridylate synthase FY145_20135 PF01205 Uncharacterized protein family UPF0029 FY145_20140 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_20140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY145_20145 PF00571 CBS domain FY145_20145 PF00005 ABC transporter FY145_20150 PF00528 Binding-protein-dependent transport system inner membrane component FY145_20165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_20165 PF13426 PAS domain FY145_20165 PF00072 Response regulator receiver domain FY145_20170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_20175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY145_20175 PF02706 Chain length determinant protein FY145_20175 PF13807 G-rich domain on putative tyrosine kinase FY145_20180 PF00483 Nucleotidyl transferase FY145_20185 PF00535 Glycosyl transferase family 2 FY145_20190 PF00535 Glycosyl transferase family 2 FY145_20195 PF00535 Glycosyl transferase family 2 FY145_20205 PF00722 Glycosyl hydrolases family 16 FY145_20210 PF01757 Acyltransferase family FY145_20215 PF01943 Polysaccharide biosynthesis protein FY145_20220 PF00535 Glycosyl transferase family 2 FY145_20225 PF04230 Polysaccharide pyruvyl transferase FY145_20230 PF00535 Glycosyl transferase family 2 FY145_20235 PF11089 Exopolysaccharide production repressor FY145_20250 PF01165 Ribosomal protein S21 FY145_20255 PF01266 FAD dependent oxidoreductase FY145_20270 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_20270 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY145_20270 PF01571 Aminomethyltransferase folate-binding domain FY145_20270 PF17806 Sarcosine oxidase A3 domain FY145_20295 PF01575 MaoC like domain FY145_20300 PF00128 Alpha amylase, catalytic domain FY145_20300 PF18390 Glycogen debranching enzyme C-terminal domain FY145_20300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY145_20305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY145_20305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY145_20305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY145_20305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY145_20310 PF00534 Glycosyl transferases group 1 FY145_20310 PF08323 Starch synthase catalytic domain FY145_20315 PF00483 Nucleotidyl transferase FY145_20320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY145_20320 PF02806 Alpha amylase, C-terminal all-beta domain FY145_20320 PF00128 Alpha amylase, catalytic domain FY145_20325 PF00343 Carbohydrate phosphorylase FY145_20340 PF01177 Asp/Glu/Hydantoin racemase FY145_20345 PF01037 Lrp/AsnC ligand binding domain FY145_20355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY145_20355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY145_20365 PF00107 Zinc-binding dehydrogenase FY145_20365 PF08240 Alcohol dehydrogenase GroES-like domain FY145_20375 PF00005 ABC transporter FY145_20375 PF00664 ABC transporter transmembrane region FY145_20380 PF00005 ABC transporter FY145_20380 PF00664 ABC transporter transmembrane region FY145_20385 PF01654 Cytochrome bd terminal oxidase subunit I FY145_20390 PF02322 Cytochrome bd terminal oxidase subunit II FY145_20395 PF08173 Membrane bound YbgT-like protein FY145_20415 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY145_20415 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY145_20420 PF00890 FAD binding domain FY145_20420 PF02910 Fumarate reductase flavoprotein C-term FY145_20425 PF02445 Quinolinate synthetase A protein FY145_20455 PF02224 Cytidylate kinase FY145_20460 PF00575 S1 RNA binding domain FY145_20490 PF00106 short chain dehydrogenase FY145_20495 PF00557 Metallopeptidase family M24 FY145_20495 PF01321 Creatinase/Prolidase N-terminal domain FY145_20500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_20505 PF00528 Binding-protein-dependent transport system inner membrane component FY145_20510 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_20510 PF00528 Binding-protein-dependent transport system inner membrane component FY145_20515 PF00005 ABC transporter FY145_20515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_20520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_20520 PF00005 ABC transporter FY145_20525 PF08125 Mannitol dehydrogenase C-terminal domain FY145_20525 PF01232 Mannitol dehydrogenase Rossmann domain FY145_20530 PF00392 Bacterial regulatory proteins, gntR family FY145_20530 PF07729 FCD domain FY145_20535 PF13378 Enolase C-terminal domain-like FY145_20535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_20540 PF00296 Luciferase-like monooxygenase FY145_20555 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_20555 PF00005 ABC transporter FY145_20560 PF00005 ABC transporter FY145_20565 PF02653 Branched-chain amino acid transport system / permease component FY145_20570 PF11862 Domain of unknown function (DUF3382) FY145_20570 PF02653 Branched-chain amino acid transport system / permease component FY145_20575 PF00732 GMC oxidoreductase FY145_20575 PF05199 GMC oxidoreductase FY145_20580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY145_20580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY145_20585 PF00501 AMP-binding enzyme FY145_20585 PF13193 AMP-binding enzyme C-terminal domain FY145_20605 PF01011 PQQ enzyme repeat FY145_20610 PF05974 Domain of unknown function (DUF892) FY145_20620 PF01266 FAD dependent oxidoreductase FY145_20620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY145_20640 PF01965 DJ-1/PfpI family FY145_20660 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY145_20660 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY145_20665 PF16363 GDP-mannose 4,6 dehydratase FY145_20670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY145_20670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY145_20670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY145_20685 PF13409 Glutathione S-transferase, N-terminal domain FY145_20690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_20690 PF03466 LysR substrate binding domain FY145_20695 PF00171 Aldehyde dehydrogenase family FY145_20700 PF09084 NMT1/THI5 like FY145_20705 PF00528 Binding-protein-dependent transport system inner membrane component FY145_20710 PF00005 ABC transporter FY145_20715 PF00171 Aldehyde dehydrogenase family FY145_20715 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY145_20715 PF14850 DNA-binding domain of Proline dehydrogenase FY145_20715 PF01619 Proline dehydrogenase FY145_20720 PF01037 Lrp/AsnC ligand binding domain FY145_20725 PF04542 Sigma-70 region 2 FY145_20725 PF08281 Sigma-70, region 4 FY145_20735 PF00072 Response regulator receiver domain FY145_20740 PF08447 PAS fold FY145_20740 PF07536 HWE histidine kinase FY145_20740 PF13426 PAS domain FY145_20745 PF13426 PAS domain FY145_20745 PF07536 HWE histidine kinase FY145_20755 PF16363 GDP-mannose 4,6 dehydratase FY145_20770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY145_20775 PF16653 Saccharopine dehydrogenase C-terminal domain FY145_20775 PF03435 Saccharopine dehydrogenase NADP binding domain FY145_20780 PF00271 Helicase conserved C-terminal domain FY145_20780 PF00270 DEAD/DEAH box helicase FY145_20785 PF01842 ACT domain FY145_20785 PF13840 ACT domain FY145_20785 PF00696 Amino acid kinase family FY145_20790 PF02896 PEP-utilising enzyme, TIM barrel domain FY145_20790 PF00391 PEP-utilising enzyme, mobile domain FY145_20790 PF01590 GAF domain FY145_20790 PF05524 PEP-utilising enzyme, N-terminal FY145_20795 PF03462 PCRF domain FY145_20795 PF00472 RF-1 domain FY145_20800 PF17827 PrmC N-terminal domain FY145_20800 PF05175 Methyltransferase small domain FY145_20810 PF10431 C-terminal, D2-small domain, of ClpB protein FY145_20810 PF02861 Clp amino terminal domain, pathogenicity island component FY145_20810 PF17871 AAA lid domain FY145_20810 PF07724 AAA domain (Cdc48 subfamily) FY145_20810 PF00004 ATPase family associated with various cellular activities (AAA) FY145_20815 PF01464 Transglycosylase SLT domain FY145_20815 PF10145 Phage-related minor tail protein FY145_20815 PF01551 Peptidase family M23 FY145_20860 PF02525 Flavodoxin-like fold FY145_20870 PF01810 LysE type translocator FY145_20885 PF00440 Bacterial regulatory proteins, tetR family FY145_20890 PF00106 short chain dehydrogenase FY145_20895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY145_20900 PF00106 short chain dehydrogenase FY145_20905 PF00561 alpha/beta hydrolase fold FY145_20910 PF08240 Alcohol dehydrogenase GroES-like domain FY145_20910 PF00107 Zinc-binding dehydrogenase FY145_20940 PF00313 'Cold-shock' DNA-binding domain FY145_20960 PF00199 Catalase FY145_20960 PF06628 Catalase-related immune-responsive FY145_20960 PF18011 C-terminal domain found in long catalases FY145_20985 PF13426 PAS domain FY145_20985 PF07536 HWE histidine kinase FY145_20985 PF13581 Histidine kinase-like ATPase domain FY145_20990 PF01810 LysE type translocator FY145_21010 PF03466 LysR substrate binding domain FY145_21010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21015 PF08240 Alcohol dehydrogenase GroES-like domain FY145_21015 PF00107 Zinc-binding dehydrogenase FY145_21020 PF00171 Aldehyde dehydrogenase family FY145_21040 PF00106 short chain dehydrogenase FY145_21045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21045 PF03466 LysR substrate binding domain FY145_21060 PF01047 MarR family FY145_21080 PF00392 Bacterial regulatory proteins, gntR family FY145_21080 PF07729 FCD domain FY145_21090 PF00005 ABC transporter FY145_21095 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21100 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21105 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_21110 PF01968 Hydantoinase/oxoprolinase FY145_21110 PF05378 Hydantoinase/oxoprolinase N-terminal region FY145_21120 PF00155 Aminotransferase class I and II FY145_21125 PF00701 Dihydrodipicolinate synthetase family FY145_21130 PF01850 PIN domain FY145_21140 PF13173 AAA domain FY145_21140 PF13635 Domain of unknown function (DUF4143) FY145_21165 PF00291 Pyridoxal-phosphate dependent enzyme FY145_21170 PF00296 Luciferase-like monooxygenase FY145_21175 PF00296 Luciferase-like monooxygenase FY145_21185 PF00296 Luciferase-like monooxygenase FY145_21190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_21195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_21200 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21205 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_21205 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_21210 PF00005 ABC transporter FY145_21215 PF00296 Luciferase-like monooxygenase FY145_21225 PF00005 ABC transporter FY145_21230 PF02653 Branched-chain amino acid transport system / permease component FY145_21235 PF02653 Branched-chain amino acid transport system / permease component FY145_21240 PF00296 Luciferase-like monooxygenase FY145_21250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY145_21250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_21255 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY145_21255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_21255 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_21260 PF00248 Aldo/keto reductase family FY145_21275 PF02653 Branched-chain amino acid transport system / permease component FY145_21280 PF00005 ABC transporter FY145_21285 PF13407 Periplasmic binding protein domain FY145_21295 PF00890 FAD binding domain FY145_21295 PF02910 Fumarate reductase flavoprotein C-term FY145_21305 PF00005 ABC transporter FY145_21305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_21310 PF00005 ABC transporter FY145_21310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_21315 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21315 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_21320 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_21350 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21355 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21360 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_21375 PF02661 Fic/DOC family FY145_21375 PF13784 Fic/DOC family N-terminal FY145_21400 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_21400 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21410 PF04717 Type VI secretion system, phage-baseplate injector FY145_21430 PF03527 RHS protein FY145_21430 PF05593 RHS Repeat FY145_21450 PF00486 Transcriptional regulatory protein, C terminal FY145_21450 PF00072 Response regulator receiver domain FY145_21455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_21455 PF00512 His Kinase A (phospho-acceptor) domain FY145_21455 PF00989 PAS fold FY145_21455 PF11808 Phosphate regulon sensor protein PhoR FY145_21460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_21465 PF00005 ABC transporter FY145_21465 PF02687 FtsX-like permease family FY145_21465 PF12704 MacB-like periplasmic core domain FY145_21475 PF01638 HxlR-like helix-turn-helix FY145_21485 PF03466 LysR substrate binding domain FY145_21485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21490 PF00753 Metallo-beta-lactamase superfamily FY145_21510 PF01554 MatE FY145_21525 PF12327 FtsZ family, C-terminal domain FY145_21525 PF00091 Tubulin/FtsZ family, GTPase domain FY145_21530 PF02801 Beta-ketoacyl synthase, C-terminal domain FY145_21530 PF00109 Beta-ketoacyl synthase, N-terminal domain FY145_21535 PF00440 Bacterial regulatory proteins, tetR family FY145_21540 PF13533 Biotin-lipoyl like FY145_21545 PF00873 AcrB/AcrD/AcrF family FY145_21550 PF02798 Glutathione S-transferase, N-terminal domain FY145_21555 PF00106 short chain dehydrogenase FY145_21565 PF02733 Dak1 domain FY145_21570 PF01037 Lrp/AsnC ligand binding domain FY145_21575 PF01053 Cys/Met metabolism PLP-dependent enzyme FY145_21590 PF03358 NADPH-dependent FMN reductase FY145_21595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY145_21600 PF00296 Luciferase-like monooxygenase FY145_21610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_21610 PF00005 ABC transporter FY145_21615 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_21615 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21620 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_21630 PF00384 Molybdopterin oxidoreductase FY145_21630 PF01568 Molydopterin dinucleotide binding domain FY145_21635 PF01565 FAD binding domain FY145_21635 PF02913 FAD linked oxidases, C-terminal domain FY145_21640 PF01323 DSBA-like thioredoxin domain FY145_21655 PF00881 Nitroreductase family FY145_21660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_21675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21675 PF03466 LysR substrate binding domain FY145_21685 PF00155 Aminotransferase class I and II FY145_21685 PF00392 Bacterial regulatory proteins, gntR family FY145_21700 PF02567 Phenazine biosynthesis-like protein FY145_21705 PF00293 NUDIX domain FY145_21710 PF05163 DinB family FY145_21715 PF03466 LysR substrate binding domain FY145_21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21725 PF03466 LysR substrate binding domain FY145_21730 PF00857 Isochorismatase family FY145_21735 PF03466 LysR substrate binding domain FY145_21735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21740 PF00795 Carbon-nitrogen hydrolase FY145_21755 PF00005 ABC transporter FY145_21755 PF08402 TOBE domain FY145_21760 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21765 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21770 PF01266 FAD dependent oxidoreductase FY145_21770 PF04324 BFD-like [2Fe-2S] binding domain FY145_21775 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_21775 PF04324 BFD-like [2Fe-2S] binding domain FY145_21780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY145_21780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY145_21795 PF00005 ABC transporter FY145_21800 PF01032 FecCD transport family FY145_21805 PF01032 FecCD transport family FY145_21810 PF01497 Periplasmic binding protein FY145_21815 PF07715 TonB-dependent Receptor Plug Domain FY145_21820 PF03928 Haem-degrading FY145_21825 PF00356 Bacterial regulatory proteins, lacI family FY145_21830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_21830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_21835 PF01144 Coenzyme A transferase FY145_21840 PF00378 Enoyl-CoA hydratase/isomerase FY145_21845 PF00171 Aldehyde dehydrogenase family FY145_21850 PF01547 Bacterial extracellular solute-binding protein FY145_21855 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21860 PF00528 Binding-protein-dependent transport system inner membrane component FY145_21865 PF17912 MalK OB fold domain FY145_21865 PF00005 ABC transporter FY145_21865 PF03459 TOBE domain FY145_21870 PF05199 GMC oxidoreductase FY145_21870 PF00732 GMC oxidoreductase FY145_21875 PF00732 GMC oxidoreductase FY145_21875 PF05199 GMC oxidoreductase FY145_21880 PF00890 FAD binding domain FY145_21880 PF02910 Fumarate reductase flavoprotein C-term FY145_21895 PF00034 Cytochrome c FY145_21900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY145_21905 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY145_21910 PF00510 Cytochrome c oxidase subunit III FY145_21915 PF00510 Cytochrome c oxidase subunit III FY145_21925 PF03466 LysR substrate binding domain FY145_21925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_21935 PF12704 MacB-like periplasmic core domain FY145_21935 PF02687 FtsX-like permease family FY145_21935 PF00005 ABC transporter FY145_21955 PF00486 Transcriptional regulatory protein, C terminal FY145_21955 PF00072 Response regulator receiver domain FY145_21960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_21960 PF00512 His Kinase A (phospho-acceptor) domain FY145_21960 PF00672 HAMP domain FY145_21970 PF00196 Bacterial regulatory proteins, luxR family FY145_21990 PF00005 ABC transporter FY145_21990 PF08402 TOBE domain FY145_22000 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22005 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22010 PF01177 Asp/Glu/Hydantoin racemase FY145_22020 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY145_22020 PF00480 ROK family FY145_22025 PF13407 Periplasmic binding protein domain FY145_22030 PF02653 Branched-chain amino acid transport system / permease component FY145_22035 PF00005 ABC transporter FY145_22040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY145_22040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY145_22045 PF00455 DeoR C terminal sensor domain FY145_22045 PF08220 DeoR-like helix-turn-helix domain FY145_22070 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22075 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22080 PF17912 MalK OB fold domain FY145_22080 PF00005 ABC transporter FY145_22100 PF00817 impB/mucB/samB family FY145_22100 PF11799 impB/mucB/samB family C-terminal domain FY145_22110 PF01979 Amidohydrolase family FY145_22120 PF07690 Major Facilitator Superfamily FY145_22145 PF00005 ABC transporter FY145_22160 PF13382 Adenine deaminase C-terminal domain FY145_22160 PF01979 Amidohydrolase family FY145_22165 PF08240 Alcohol dehydrogenase GroES-like domain FY145_22165 PF00107 Zinc-binding dehydrogenase FY145_22170 PF01638 HxlR-like helix-turn-helix FY145_22190 PF00355 Rieske [2Fe-2S] domain FY145_22190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY145_22195 PF00111 2Fe-2S iron-sulfur cluster binding domain FY145_22195 PF00970 Oxidoreductase FAD-binding domain FY145_22195 PF00175 Oxidoreductase NAD-binding domain FY145_22205 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY145_22205 PF03807 NADP oxidoreductase coenzyme F420-dependent FY145_22210 PF05544 Proline racemase FY145_22215 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22220 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22225 PF00571 CBS domain FY145_22225 PF00005 ABC transporter FY145_22235 PF01266 FAD dependent oxidoreductase FY145_22240 PF00171 Aldehyde dehydrogenase family FY145_22245 PF00701 Dihydrodipicolinate synthetase family FY145_22260 PF01266 FAD dependent oxidoreductase FY145_22270 PF01571 Aminomethyltransferase folate-binding domain FY145_22270 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY145_22270 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_22270 PF17806 Sarcosine oxidase A3 domain FY145_22280 PF00464 Serine hydroxymethyltransferase FY145_22285 PF00551 Formyl transferase FY145_22300 PF00440 Bacterial regulatory proteins, tetR family FY145_22305 PF00245 Alkaline phosphatase FY145_22315 PF00005 ABC transporter FY145_22330 PF00107 Zinc-binding dehydrogenase FY145_22330 PF08240 Alcohol dehydrogenase GroES-like domain FY145_22335 PF12833 Helix-turn-helix domain FY145_22340 PF13407 Periplasmic binding protein domain FY145_22345 PF00005 ABC transporter FY145_22350 PF02653 Branched-chain amino acid transport system / permease component FY145_22355 PF00106 short chain dehydrogenase FY145_22360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY145_22360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY145_22370 PF00083 Sugar (and other) transporter FY145_22370 PF08946 Osmosensory transporter coiled coil FY145_22380 PF02563 Polysaccharide biosynthesis/export protein FY145_22385 PF07238 PilZ domain FY145_22385 PF00069 Protein kinase domain FY145_22395 PF06761 Intracellular multiplication and human macrophage-killing FY145_22395 PF14331 ImcF-related N-terminal domain FY145_22395 PF06744 Type VI secretion protein IcmF C-terminal FY145_22400 PF00691 OmpA family FY145_22405 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY145_22420 PF05947 Type VI secretion system, TssF FY145_22440 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY145_22445 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY145_22455 PF07724 AAA domain (Cdc48 subfamily) FY145_22455 PF00004 ATPase family associated with various cellular activities (AAA) FY145_22455 PF17871 AAA lid domain FY145_22455 PF10431 C-terminal, D2-small domain, of ClpB protein FY145_22475 PF04717 Type VI secretion system, phage-baseplate injector FY145_22500 PF00563 EAL domain FY145_22500 PF13188 PAS domain FY145_22500 PF03707 Bacterial signalling protein N terminal repeat FY145_22500 PF00990 Diguanylate cyclase, GGDEF domain FY145_22505 PF00459 Inositol monophosphatase family FY145_22520 PF00356 Bacterial regulatory proteins, lacI family FY145_22525 PF03471 Transporter associated domain FY145_22525 PF03741 Integral membrane protein TerC family FY145_22540 PF00005 ABC transporter FY145_22540 PF17912 MalK OB fold domain FY145_22540 PF03459 TOBE domain FY145_22545 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22550 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22555 PF13416 Bacterial extracellular solute-binding protein FY145_22560 PF01261 Xylose isomerase-like TIM barrel FY145_22565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_22565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_22570 PF00356 Bacterial regulatory proteins, lacI family FY145_22585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_22585 PF03466 LysR substrate binding domain FY145_22595 PF13407 Periplasmic binding protein domain FY145_22600 PF00005 ABC transporter FY145_22605 PF02653 Branched-chain amino acid transport system / permease component FY145_22610 PF02653 Branched-chain amino acid transport system / permease component FY145_22615 PF00356 Bacterial regulatory proteins, lacI family FY145_22625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_22625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_22645 PF00034 Cytochrome c FY145_22660 PF00394 Multicopper oxidase FY145_22660 PF07732 Multicopper oxidase FY145_22680 PF00092 von Willebrand factor type A domain FY145_22685 PF07728 AAA domain (dynein-related subfamily) FY145_22685 PF08406 CbbQ/NirQ/NorQ C-terminal FY145_22690 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY145_22695 PF00034 Cytochrome c FY145_22705 PF00510 Cytochrome c oxidase subunit III FY145_22715 PF02441 Flavoprotein FY145_22720 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY145_22725 PF04343 Protein of unknown function, DUF488 FY145_22735 PF01136 Peptidase family U32 FY145_22760 PF00005 ABC transporter FY145_22770 PF06796 Periplasmic nitrate reductase protein NapE FY145_22785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY145_22785 PF00384 Molybdopterin oxidoreductase FY145_22785 PF01568 Molydopterin dinucleotide binding domain FY145_22790 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY145_22795 PF03264 NapC/NirT cytochrome c family, N-terminal region FY145_22805 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY145_22805 PF01648 4'-phosphopantetheinyl transferase superfamily FY145_22815 PF00857 Isochorismatase family FY145_22815 PF00550 Phosphopantetheine attachment site FY145_22820 PF13193 AMP-binding enzyme C-terminal domain FY145_22820 PF00501 AMP-binding enzyme FY145_22825 PF00425 chorismate binding enzyme FY145_22830 PF00550 Phosphopantetheine attachment site FY145_22830 PF00668 Condensation domain FY145_22830 PF13193 AMP-binding enzyme C-terminal domain FY145_22830 PF00501 AMP-binding enzyme FY145_22835 PF00668 Condensation domain FY145_22835 PF00501 AMP-binding enzyme FY145_22835 PF00550 Phosphopantetheine attachment site FY145_22835 PF00975 Thioesterase domain FY145_22840 PF00550 Phosphopantetheine attachment site FY145_22840 PF00975 Thioesterase domain FY145_22840 PF00501 AMP-binding enzyme FY145_22840 PF00668 Condensation domain FY145_22840 PF13193 AMP-binding enzyme C-terminal domain FY145_22850 PF08021 Siderophore-interacting FAD-binding domain FY145_22850 PF04954 Siderophore-interacting protein FY145_22860 PF01032 FecCD transport family FY145_22865 PF01032 FecCD transport family FY145_22870 PF00005 ABC transporter FY145_22875 PF00296 Luciferase-like monooxygenase FY145_22885 PF07715 TonB-dependent Receptor Plug Domain FY145_22890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_22890 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_22890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_22895 PF03466 LysR substrate binding domain FY145_22895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_22900 PF00356 Bacterial regulatory proteins, lacI family FY145_22910 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22920 PF00005 ABC transporter FY145_22920 PF08402 TOBE domain FY145_22930 PF13382 Adenine deaminase C-terminal domain FY145_22930 PF01979 Amidohydrolase family FY145_22935 PF03466 LysR substrate binding domain FY145_22935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_22940 PF07690 Major Facilitator Superfamily FY145_22945 PF07687 Peptidase dimerisation domain FY145_22945 PF01546 Peptidase family M20/M25/M40 FY145_22955 PF01244 Membrane dipeptidase (Peptidase family M19) FY145_22960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_22965 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22970 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_22970 PF00528 Binding-protein-dependent transport system inner membrane component FY145_22975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_22975 PF00005 ABC transporter FY145_22980 PF00005 ABC transporter FY145_22980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_22985 PF03466 LysR substrate binding domain FY145_22985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_22990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_22995 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23000 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_23000 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23005 PF01425 Amidase FY145_23010 PF01965 DJ-1/PfpI family FY145_23020 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_23020 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23025 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_23035 PF07687 Peptidase dimerisation domain FY145_23035 PF01546 Peptidase family M20/M25/M40 FY145_23040 PF00005 ABC transporter FY145_23040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_23045 PF04198 Putative sugar-binding domain FY145_23055 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23060 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23065 PF00005 ABC transporter FY145_23065 PF08402 TOBE domain FY145_23075 PF08125 Mannitol dehydrogenase C-terminal domain FY145_23075 PF01232 Mannitol dehydrogenase Rossmann domain FY145_23080 PF13419 Haloacid dehalogenase-like hydrolase FY145_23085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY145_23085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY145_23100 PF00730 HhH-GPD superfamily base excision DNA repair protein FY145_23100 PF00633 Helix-hairpin-helix motif FY145_23100 PF10576 Iron-sulfur binding domain of endonuclease III FY145_23110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY145_23110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY145_23125 PF04198 Putative sugar-binding domain FY145_23125 PF13936 Helix-turn-helix domain FY145_23130 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY145_23135 PF01614 Bacterial transcriptional regulator FY145_23135 PF09339 IclR helix-turn-helix domain FY145_23150 PF00950 ABC 3 transport family FY145_23155 PF00950 ABC 3 transport family FY145_23160 PF00005 ABC transporter FY145_23165 PF01297 Zinc-uptake complex component A periplasmic FY145_23175 PF01734 Patatin-like phospholipase FY145_23180 PF00152 tRNA synthetases class II (D, K and N) FY145_23180 PF01336 OB-fold nucleic acid binding domain FY145_23185 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY145_23190 PF03600 Citrate transporter FY145_23190 PF02080 TrkA-C domain FY145_23195 PF03471 Transporter associated domain FY145_23195 PF03741 Integral membrane protein TerC family FY145_23200 PF00440 Bacterial regulatory proteins, tetR family FY145_23205 PF13533 Biotin-lipoyl like FY145_23210 PF07690 Major Facilitator Superfamily FY145_23220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY145_23220 PF00356 Bacterial regulatory proteins, lacI family FY145_23225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY145_23225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY145_23230 PF01261 Xylose isomerase-like TIM barrel FY145_23235 PF00232 Glycosyl hydrolase family 1 FY145_23240 PF00881 Nitroreductase family FY145_23245 PF00005 ABC transporter FY145_23245 PF09383 NIL domain FY145_23250 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23255 PF03180 NLPA lipoprotein FY145_23260 PF00563 EAL domain FY145_23260 PF00990 Diguanylate cyclase, GGDEF domain FY145_23260 PF03707 Bacterial signalling protein N terminal repeat FY145_23260 PF13188 PAS domain FY145_23265 PF00581 Rhodanese-like domain FY145_23265 PF17773 UPF0176 acylphosphatase like domain FY145_23275 PF01928 CYTH domain FY145_23280 PF01081 KDPG and KHG aldolase FY145_23300 PF03824 High-affinity nickel-transport protein FY145_23320 PF13505 Outer membrane protein beta-barrel domain FY145_23340 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY145_23340 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY145_23345 PF02633 Creatinine amidohydrolase FY145_23350 PF01047 MarR family FY145_23355 PF00356 Bacterial regulatory proteins, lacI family FY145_23360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_23360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_23365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_23365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_23370 PF04962 KduI/IolB family FY145_23375 PF01261 Xylose isomerase-like TIM barrel FY145_23380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY145_23380 PF00205 Thiamine pyrophosphate enzyme, central domain FY145_23380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY145_23385 PF00294 pfkB family carbohydrate kinase FY145_23395 PF00005 ABC transporter FY145_23400 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_23400 PF00005 ABC transporter FY145_23415 PF13458 Periplasmic binding protein FY145_23430 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_23430 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23435 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_23445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_23445 PF00005 ABC transporter FY145_23460 PF01261 Xylose isomerase-like TIM barrel FY145_23460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_23470 PF01220 Dehydroquinase class II FY145_23475 PF08501 Shikimate dehydrogenase substrate binding domain FY145_23475 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY145_23480 PF00005 ABC transporter FY145_23485 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_23490 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_23495 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23500 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23505 PF10397 Adenylosuccinate lyase C-terminus FY145_23505 PF00206 Lyase FY145_23510 PF00775 Dioxygenase FY145_23515 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY145_23515 PF00775 Dioxygenase FY145_23520 PF02627 Carboxymuconolactone decarboxylase family FY145_23525 PF00561 alpha/beta hydrolase fold FY145_23530 PF03466 LysR substrate binding domain FY145_23530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_23535 PF01494 FAD binding domain FY145_23545 PF09339 IclR helix-turn-helix domain FY145_23545 PF01614 Bacterial transcriptional regulator FY145_23550 PF01144 Coenzyme A transferase FY145_23555 PF01144 Coenzyme A transferase FY145_23560 PF02803 Thiolase, C-terminal domain FY145_23560 PF00108 Thiolase, N-terminal domain FY145_23565 PF00356 Bacterial regulatory proteins, lacI family FY145_23570 PF13407 Periplasmic binding protein domain FY145_23575 PF13407 Periplasmic binding protein domain FY145_23580 PF01261 Xylose isomerase-like TIM barrel FY145_23585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_23585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_23595 PF00356 Bacterial regulatory proteins, lacI family FY145_23600 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23605 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23610 PF00005 ABC transporter FY145_23610 PF17912 MalK OB fold domain FY145_23620 PF07470 Glycosyl Hydrolase Family 88 FY145_23640 PF07690 Major Facilitator Superfamily FY145_23645 PF00593 TonB dependent receptor FY145_23645 PF07715 TonB-dependent Receptor Plug Domain FY145_23650 PF04773 FecR protein FY145_23650 PF16220 Domain of unknown function (DUF4880) FY145_23660 PF00480 ROK family FY145_23660 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY145_23665 PF03009 Glycerophosphoryl diester phosphodiesterase family FY145_23670 PF00106 short chain dehydrogenase FY145_23675 PF12852 Cupin FY145_23675 PF12833 Helix-turn-helix domain FY145_23685 PF11953 Domain of unknown function (DUF3470) FY145_23685 PF00037 4Fe-4S binding domain FY145_23690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY145_23690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY145_23705 PF00248 Aldo/keto reductase family FY145_23710 PF03466 LysR substrate binding domain FY145_23710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_23720 PF00005 ABC transporter FY145_23720 PF00664 ABC transporter transmembrane region FY145_23725 PF03275 UDP-galactopyranose mutase FY145_23735 PF01501 Glycosyl transferase family 8 FY145_23735 PF00535 Glycosyl transferase family 2 FY145_23740 PF13580 SIS domain FY145_23745 PF01370 NAD dependent epimerase/dehydratase family FY145_23775 PF05045 Rhamnan synthesis protein F FY145_23790 PF00483 Nucleotidyl transferase FY145_23795 PF04321 RmlD substrate binding domain FY145_23800 PF16363 GDP-mannose 4,6 dehydratase FY145_23805 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY145_23810 PF00580 UvrD/REP helicase N-terminal domain FY145_23810 PF13361 UvrD-like helicase C-terminal domain FY145_23820 PF00356 Bacterial regulatory proteins, lacI family FY145_23825 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_23825 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY145_23825 PF17806 Sarcosine oxidase A3 domain FY145_23825 PF01571 Aminomethyltransferase folate-binding domain FY145_23835 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23840 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23845 PF00005 ABC transporter FY145_23845 PF17912 MalK OB fold domain FY145_23845 PF03459 TOBE domain FY145_23850 PF00005 ABC transporter FY145_23850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_23855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_23855 PF00005 ABC transporter FY145_23860 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_23860 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23865 PF00528 Binding-protein-dependent transport system inner membrane component FY145_23870 PF00392 Bacterial regulatory proteins, gntR family FY145_23870 PF07729 FCD domain FY145_23875 PF03786 D-mannonate dehydratase (UxuA) FY145_23880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_23890 PF00990 Diguanylate cyclase, GGDEF domain FY145_23890 PF00563 EAL domain FY145_23890 PF03707 Bacterial signalling protein N terminal repeat FY145_23890 PF13188 PAS domain FY145_23905 PF02735 Ku70/Ku80 beta-barrel domain FY145_23910 PF13298 DNA polymerase Ligase (LigD) FY145_23910 PF01068 ATP dependent DNA ligase domain FY145_23910 PF04679 ATP dependent DNA ligase C terminal region FY145_23915 PF02735 Ku70/Ku80 beta-barrel domain FY145_23920 PF01384 Phosphate transporter family FY145_23925 PF01865 Protein of unknown function DUF47 FY145_23935 PF00873 AcrB/AcrD/AcrF family FY145_23940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY145_23940 PF00529 HlyD membrane-fusion protein of T1SS FY145_23945 PF00072 Response regulator receiver domain FY145_23945 PF00486 Transcriptional regulatory protein, C terminal FY145_23950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_23950 PF00512 His Kinase A (phospho-acceptor) domain FY145_23950 PF00672 HAMP domain FY145_23960 PF03466 LysR substrate binding domain FY145_23960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_23965 PF00141 Peroxidase FY145_23970 PF12833 Helix-turn-helix domain FY145_23975 PF07715 TonB-dependent Receptor Plug Domain FY145_23975 PF00593 TonB dependent receptor FY145_23985 PF01032 FecCD transport family FY145_23990 PF01032 FecCD transport family FY145_23995 PF00005 ABC transporter FY145_24000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_24000 PF03466 LysR substrate binding domain FY145_24005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY145_24010 PF00884 Sulfatase FY145_24010 PF12411 Choline sulfatase enzyme C terminal FY145_24015 PF00294 pfkB family carbohydrate kinase FY145_24020 PF00005 ABC transporter FY145_24020 PF08402 TOBE domain FY145_24025 PF14698 Argininosuccinate lyase C-terminal FY145_24025 PF00206 Lyase FY145_24030 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24035 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24040 PF13416 Bacterial extracellular solute-binding protein FY145_24045 PF00480 ROK family FY145_24070 PF02056 Family 4 glycosyl hydrolase FY145_24070 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY145_24075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_24080 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24085 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24085 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_24090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_24090 PF00005 ABC transporter FY145_24095 PF02056 Family 4 glycosyl hydrolase FY145_24095 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY145_24100 PF13533 Biotin-lipoyl like FY145_24105 PF00005 ABC transporter FY145_24125 PF00072 Response regulator receiver domain FY145_24130 PF12327 FtsZ family, C-terminal domain FY145_24130 PF00091 Tubulin/FtsZ family, GTPase domain FY145_24135 PF00392 Bacterial regulatory proteins, gntR family FY145_24135 PF07729 FCD domain FY145_24140 PF00701 Dihydrodipicolinate synthetase family FY145_24145 PF02615 Malate/L-lactate dehydrogenase FY145_24155 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24160 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24165 PF00005 ABC transporter FY145_24170 PF01266 FAD dependent oxidoreductase FY145_24180 PF05544 Proline racemase FY145_24185 PF00356 Bacterial regulatory proteins, lacI family FY145_24195 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_24200 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24205 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24210 PF00005 ABC transporter FY145_24215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_24215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_24220 PF03707 Bacterial signalling protein N terminal repeat FY145_24220 PF00990 Diguanylate cyclase, GGDEF domain FY145_24220 PF00563 EAL domain FY145_24225 PF02530 Porin subfamily FY145_24230 PF01613 Flavin reductase like domain FY145_24235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_24235 PF03466 LysR substrate binding domain FY145_24245 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY145_24245 PF00037 4Fe-4S binding domain FY145_24245 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY145_24250 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY145_24250 PF01568 Molydopterin dinucleotide binding domain FY145_24250 PF00384 Molybdopterin oxidoreductase FY145_24250 PF00037 4Fe-4S binding domain FY145_24250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY145_24260 PF07690 Major Facilitator Superfamily FY145_24265 PF00701 Dihydrodipicolinate synthetase family FY145_24270 PF08450 SMP-30/Gluconolactonase/LRE-like region FY145_24275 PF07729 FCD domain FY145_24275 PF00392 Bacterial regulatory proteins, gntR family FY145_24280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_24285 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24290 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24290 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_24295 PF00005 ABC transporter FY145_24295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_24300 PF13378 Enolase C-terminal domain-like FY145_24300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_24310 PF00392 Bacterial regulatory proteins, gntR family FY145_24310 PF07729 FCD domain FY145_24315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_24320 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24325 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_24325 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24335 PF00005 ABC transporter FY145_24335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_24340 PF00459 Inositol monophosphatase family FY145_24350 PF00005 ABC transporter FY145_24350 PF17850 CysA C-terminal regulatory domain FY145_24355 PF00528 Binding-protein-dependent transport system inner membrane component FY145_24375 PF05532 CsbD-like FY145_24385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY145_24385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY145_24390 PF03401 Tripartite tricarboxylate transporter family receptor FY145_24395 PF00664 ABC transporter transmembrane region FY145_24395 PF00005 ABC transporter FY145_24400 PF00005 ABC transporter FY145_24410 PF13953 PapC C-terminal domain FY145_24410 PF00577 Outer membrane usher protein FY145_24410 PF13954 PapC N-terminal domain FY145_24425 PF00330 Aconitase family (aconitate hydratase) FY145_24425 PF06434 Aconitate hydratase 2 N-terminus FY145_24425 PF11791 Aconitate B N-terminal domain FY145_24430 PF00132 Bacterial transferase hexapeptide (six repeats) FY145_24440 PF08240 Alcohol dehydrogenase GroES-like domain FY145_24440 PF00107 Zinc-binding dehydrogenase FY145_24445 PF02954 Bacterial regulatory protein, Fis family FY145_24445 PF01590 GAF domain FY145_24445 PF00158 Sigma-54 interaction domain FY145_24455 PF00356 Bacterial regulatory proteins, lacI family FY145_24465 PF00005 ABC transporter FY145_24470 PF02653 Branched-chain amino acid transport system / permease component FY145_24475 PF02653 Branched-chain amino acid transport system / permease component FY145_24480 PF01261 Xylose isomerase-like TIM barrel FY145_24485 PF00485 Phosphoribulokinase / Uridine kinase family FY145_24490 PF01261 Xylose isomerase-like TIM barrel FY145_24515 PF06472 ABC transporter transmembrane region 2 FY145_24515 PF00005 ABC transporter FY145_24580 PF13614 AAA domain FY145_24580 PF00376 MerR family regulatory protein FY145_24585 PF07506 RepB plasmid partitioning protein FY145_24585 PF02195 ParB-like nuclease domain FY145_24590 PF03428 Replication protein C N-terminal domain FY145_24590 PF11800 Replication protein C C-terminal region FY145_24600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_24600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_24605 PF00005 ABC transporter FY145_24610 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_24615 PF00356 Bacterial regulatory proteins, lacI family FY145_24650 PF00487 Fatty acid desaturase FY145_24660 PF00313 'Cold-shock' DNA-binding domain FY145_24700 PF07516 SecA Wing and Scaffold domain FY145_24700 PF07517 SecA DEAD-like domain FY145_24700 PF02810 SEC-C motif FY145_24700 PF01043 SecA preprotein cross-linking domain FY145_24740 PF13087 AAA domain FY145_24740 PF13091 PLD-like domain FY145_24775 PF00989 PAS fold FY145_24775 PF00512 His Kinase A (phospho-acceptor) domain FY145_24775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_24780 PF00664 ABC transporter transmembrane region FY145_24780 PF00005 ABC transporter FY145_24790 PF01022 Bacterial regulatory protein, arsR family FY145_24820 PF01965 DJ-1/PfpI family FY145_24820 PF12833 Helix-turn-helix domain FY145_24825 PF07690 Major Facilitator Superfamily FY145_24830 PF07690 Major Facilitator Superfamily FY145_24835 PF01047 MarR family FY145_24850 PF07690 Major Facilitator Superfamily FY145_24880 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY145_24885 PF00561 alpha/beta hydrolase fold FY145_24895 PF04752 ChaC-like protein FY145_24900 PF03466 LysR substrate binding domain FY145_24900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_24915 PF00011 Hsp20/alpha crystallin family FY145_24960 PF04956 TrbC/VIRB2 family FY145_24965 PF05101 Type IV secretory pathway, VirB3-like protein FY145_24970 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY145_24975 PF07996 Type IV secretion system proteins FY145_24985 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY145_24995 PF04335 VirB8 protein FY145_25000 PF03524 Conjugal transfer protein FY145_25005 PF03743 Bacterial conjugation TrbI-like protein FY145_25010 PF00437 Type II/IV secretion system protein FY145_25030 PF03230 Antirestriction protein FY145_25110 PF05406 WGR domain FY145_25125 PF02534 Type IV secretory system Conjugative DNA transfer FY145_25140 PF03389 MobA/MobL family FY145_25140 PF01443 Viral (Superfamily 1) RNA helicase FY145_25140 PF17841 BID domain of Bartonella effector protein (Bep) FY145_25150 PF03466 LysR substrate binding domain FY145_25150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_25175 PF00196 Bacterial regulatory proteins, luxR family FY145_25175 PF03472 Autoinducer binding domain FY145_25180 PF00765 Autoinducer synthase FY145_25190 PF00072 Response regulator receiver domain FY145_25190 PF00486 Transcriptional regulatory protein, C terminal FY145_25215 PF00795 Carbon-nitrogen hydrolase FY145_25225 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY145_25230 PF00005 ABC transporter FY145_25230 PF08402 TOBE domain FY145_25235 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25240 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25255 PF13635 Domain of unknown function (DUF4143) FY145_25255 PF13173 AAA domain FY145_25260 PF02436 Conserved carboxylase domain FY145_25260 PF00364 Biotin-requiring enzyme FY145_25260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY145_25260 PF00682 HMGL-like FY145_25260 PF00289 Biotin carboxylase, N-terminal domain FY145_25260 PF02785 Biotin carboxylase C-terminal domain FY145_25265 PF14552 Tautomerase enzyme FY145_25270 PF03328 HpcH/HpaI aldolase/citrate lyase family FY145_25275 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY145_25285 PF01614 Bacterial transcriptional regulator FY145_25285 PF09339 IclR helix-turn-helix domain FY145_25295 PF00005 ABC transporter FY145_25300 PF00005 ABC transporter FY145_25310 PF11862 Domain of unknown function (DUF3382) FY145_25310 PF02653 Branched-chain amino acid transport system / permease component FY145_25330 PF08502 LeuA allosteric (dimerisation) domain FY145_25330 PF00682 HMGL-like FY145_25335 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25340 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25345 PF01047 MarR family FY145_25345 PF00480 ROK family FY145_25350 PF00128 Alpha amylase, catalytic domain FY145_25355 PF01546 Peptidase family M20/M25/M40 FY145_25355 PF07687 Peptidase dimerisation domain FY145_25360 PF01261 Xylose isomerase-like TIM barrel FY145_25365 PF17912 MalK OB fold domain FY145_25365 PF00005 ABC transporter FY145_25375 PF00480 ROK family FY145_25380 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25385 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25390 PF01547 Bacterial extracellular solute-binding protein FY145_25395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY145_25395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY145_25410 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY145_25425 PF00005 ABC transporter FY145_25430 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25435 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25440 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_25445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_25445 PF00005 ABC transporter FY145_25450 PF00005 ABC transporter FY145_25450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_25455 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25455 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_25460 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_25470 PF03737 Aldolase/RraA FY145_25475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_25475 PF03466 LysR substrate binding domain FY145_25480 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY145_25485 PF07687 Peptidase dimerisation domain FY145_25485 PF01546 Peptidase family M20/M25/M40 FY145_25490 PF01156 Inosine-uridine preferring nucleoside hydrolase FY145_25510 PF00857 Isochorismatase family FY145_25550 PF01548 Transposase FY145_25550 PF02371 Transposase IS116/IS110/IS902 family FY145_25555 PF01042 Endoribonuclease L-PSP FY145_25560 PF03447 Homoserine dehydrogenase, NAD binding domain FY145_25560 PF01958 Domain of unknown function DUF108 FY145_25570 PF01266 FAD dependent oxidoreductase FY145_25580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_25580 PF04324 BFD-like [2Fe-2S] binding domain FY145_25585 PF00392 Bacterial regulatory proteins, gntR family FY145_25585 PF07729 FCD domain FY145_25600 PF00171 Aldehyde dehydrogenase family FY145_25605 PF05199 GMC oxidoreductase FY145_25605 PF00732 GMC oxidoreductase FY145_25610 PF00005 ABC transporter FY145_25615 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25625 PF00296 Luciferase-like monooxygenase FY145_25635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_25635 PF00005 ABC transporter FY145_25640 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25640 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_25645 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_25670 PF03928 Haem-degrading FY145_25705 PF07690 Major Facilitator Superfamily FY145_25715 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25720 PF00528 Binding-protein-dependent transport system inner membrane component FY145_25725 PF00005 ABC transporter FY145_25725 PF08402 TOBE domain FY145_25735 PF13378 Enolase C-terminal domain-like FY145_25735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY145_25745 PF09339 IclR helix-turn-helix domain FY145_25745 PF01614 Bacterial transcriptional regulator FY145_25750 PF03466 LysR substrate binding domain FY145_25750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_25760 PF13458 Periplasmic binding protein FY145_25765 PF00005 ABC transporter FY145_25770 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_25770 PF00005 ABC transporter FY145_25785 PF02585 GlcNAc-PI de-N-acetylase FY145_25790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY145_25795 PF03737 Aldolase/RraA FY145_25800 PF04303 PrpF protein FY145_25810 PF00135 Carboxylesterase family FY145_25815 PF02653 Branched-chain amino acid transport system / permease component FY145_25820 PF00005 ABC transporter FY145_25830 PF00135 Carboxylesterase family FY145_25840 PF00135 Carboxylesterase family FY145_25850 PF07690 Major Facilitator Superfamily FY145_25855 PF03466 LysR substrate binding domain FY145_25855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_25880 PF00005 ABC transporter FY145_25885 PF13407 Periplasmic binding protein domain FY145_25890 PF02653 Branched-chain amino acid transport system / permease component FY145_25895 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY145_25895 PF00480 ROK family FY145_25900 PF01979 Amidohydrolase family FY145_25920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY145_25920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY145_25925 PF01261 Xylose isomerase-like TIM barrel FY145_25930 PF08450 SMP-30/Gluconolactonase/LRE-like region FY145_25935 PF00171 Aldehyde dehydrogenase family FY145_25940 PF00202 Aminotransferase class-III FY145_25945 PF01546 Peptidase family M20/M25/M40 FY145_25945 PF07687 Peptidase dimerisation domain FY145_25950 PF00171 Aldehyde dehydrogenase family FY145_25960 PF00005 ABC transporter FY145_25965 PF00005 ABC transporter FY145_25965 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_25975 PF02653 Branched-chain amino acid transport system / permease component FY145_25980 PF13458 Periplasmic binding protein FY145_25990 PF12802 MarR family FY145_26010 PF00990 Diguanylate cyclase, GGDEF domain FY145_26010 PF17158 Membrane-associated sensor, integral membrane domain FY145_26025 PF07690 Major Facilitator Superfamily FY145_26030 PF00171 Aldehyde dehydrogenase family FY145_26035 PF13193 AMP-binding enzyme C-terminal domain FY145_26035 PF00501 AMP-binding enzyme FY145_26040 PF00378 Enoyl-CoA hydratase/isomerase FY145_26045 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_26045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_26045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY145_26045 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY145_26055 PF08240 Alcohol dehydrogenase GroES-like domain FY145_26055 PF00107 Zinc-binding dehydrogenase FY145_26065 PF00551 Formyl transferase FY145_26070 PF02219 Methylenetetrahydrofolate reductase FY145_26075 PF01571 Aminomethyltransferase folate-binding domain FY145_26085 PF03328 HpcH/HpaI aldolase/citrate lyase family FY145_26090 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY145_26095 PF04444 Catechol dioxygenase N terminus FY145_26095 PF00775 Dioxygenase FY145_26100 PF07729 FCD domain FY145_26100 PF00392 Bacterial regulatory proteins, gntR family FY145_26160 PF12833 Helix-turn-helix domain FY145_26160 PF14525 AraC-binding-like domain FY145_26170 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY145_26170 PF00005 ABC transporter FY145_26175 PF00005 ABC transporter FY145_26180 PF02653 Branched-chain amino acid transport system / permease component FY145_26240 PF03551 Transcriptional regulator PadR-like family FY145_26250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_26250 PF03466 LysR substrate binding domain FY145_26255 PF00857 Isochorismatase family FY145_26270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_26270 PF03466 LysR substrate binding domain FY145_26275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY145_26280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_26280 PF03466 LysR substrate binding domain FY145_26285 PF13533 Biotin-lipoyl like FY145_26305 PF00561 alpha/beta hydrolase fold FY145_26310 PF03358 NADPH-dependent FMN reductase FY145_26315 PF17954 Quercetinase C-terminal cupin domain FY145_26315 PF02678 Pirin FY145_26330 PF00857 Isochorismatase family FY145_26340 PF00440 Bacterial regulatory proteins, tetR family FY145_26345 PF00005 ABC transporter FY145_26350 PF01032 FecCD transport family FY145_26355 PF01032 FecCD transport family FY145_26365 PF00394 Multicopper oxidase FY145_26365 PF07732 Multicopper oxidase FY145_26365 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY145_26365 PF07731 Multicopper oxidase FY145_26370 PF00591 Glycosyl transferase family, a/b domain FY145_26370 PF02885 Glycosyl transferase family, helical bundle domain FY145_26375 PF00593 TonB dependent receptor FY145_26375 PF07715 TonB-dependent Receptor Plug Domain FY145_26410 PF03551 Transcriptional regulator PadR-like family FY145_26445 PF00394 Multicopper oxidase FY145_26445 PF07732 Multicopper oxidase FY145_26445 PF07731 Multicopper oxidase FY145_26465 PF01209 ubiE/COQ5 methyltransferase family FY145_26480 PF04079 Segregation and condensation complex subunit ScpB FY145_26490 PF00589 Phage integrase family FY145_26500 PF13614 AAA domain FY145_26505 PF02195 ParB-like nuclease domain FY145_26505 PF07506 RepB plasmid partitioning protein FY145_26510 PF11800 Replication protein C C-terminal region FY145_26510 PF03428 Replication protein C N-terminal domain FY145_26515 PF00239 Resolvase, N terminal domain FY145_26520 PF11972 HTH DNA binding domain FY145_26520 PF07756 Protein of unknown function (DUF1612) FY145_26540 PF02796 Helix-turn-helix domain of resolvase FY145_26540 PF00239 Resolvase, N terminal domain FY145_26545 PF07690 Major Facilitator Superfamily FY145_26555 PF08808 RES domain FY145_26595 PF00293 NUDIX domain FY145_26610 PF13332 Hemagglutinin repeat FY145_26610 PF03543 Yersinia/Haemophilus virulence surface antigen FY145_26610 PF02661 Fic/DOC family FY145_26610 PF13018 Extended Signal Peptide of Type V secretion system FY145_26610 PF05860 haemagglutination activity domain FY145_26635 PF02195 ParB-like nuclease domain FY145_26635 PF17762 HTH domain found in ParB protein FY145_26660 PF08274 PhnA Zinc-Ribbon FY145_26660 PF03831 PhnA domain FY145_26680 PF01810 LysE type translocator FY145_26695 PF05284 Protein of unknown function (DUF736) FY145_26705 PF13417 Glutathione S-transferase, N-terminal domain FY145_26735 PF08240 Alcohol dehydrogenase GroES-like domain FY145_26735 PF00107 Zinc-binding dehydrogenase FY145_26755 PF13407 Periplasmic binding protein domain FY145_26760 PF02653 Branched-chain amino acid transport system / permease component FY145_26765 PF00005 ABC transporter FY145_26780 PF01810 LysE type translocator FY145_26785 PF00216 Bacterial DNA-binding protein FY145_26805 PF02534 Type IV secretory system Conjugative DNA transfer FY145_26810 PF06412 Conjugal transfer protein TraD FY145_26815 PF07820 TraC-like protein FY145_26820 PF03389 MobA/MobL family FY145_26820 PF01443 Viral (Superfamily 1) RNA helicase FY145_26820 PF17841 BID domain of Bartonella effector protein (Bep) FY145_26825 PF10502 Signal peptidase, peptidase S26 FY145_26830 PF00795 Carbon-nitrogen hydrolase FY145_26835 PF06871 TraH_2 FY145_26840 PF09228 Prokaryotic Transcriptional repressor TraM FY145_26845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY145_26845 PF08447 PAS fold FY145_26845 PF13426 PAS domain FY145_26855 PF00196 Bacterial regulatory proteins, luxR family FY145_26855 PF03472 Autoinducer binding domain FY145_26860 PF00128 Alpha amylase, catalytic domain FY145_26865 PF02690 Na+/Pi-cotransporter FY145_26875 PF08220 DeoR-like helix-turn-helix domain FY145_26875 PF00455 DeoR C terminal sensor domain FY145_26880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_26885 PF00005 ABC transporter FY145_26885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_26890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_26890 PF00005 ABC transporter FY145_26895 PF00528 Binding-protein-dependent transport system inner membrane component FY145_26900 PF00528 Binding-protein-dependent transport system inner membrane component FY145_26900 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_26905 PF03009 Glycerophosphoryl diester phosphodiesterase family FY145_26910 PF00459 Inositol monophosphatase family FY145_26935 PF00067 Cytochrome P450 FY145_26940 PF00067 Cytochrome P450 FY145_26955 PF06903 VirK protein FY145_26990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY145_26990 PF00512 His Kinase A (phospho-acceptor) domain FY145_26995 PF01464 Transglycosylase SLT domain FY145_27000 PF04956 TrbC/VIRB2 family FY145_27005 PF05101 Type IV secretory pathway, VirB3-like protein FY145_27010 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY145_27020 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY145_27025 PF17413 Outer membrane lipoprotein virB7 FY145_27030 PF04335 VirB8 protein FY145_27035 PF03524 Conjugal transfer protein FY145_27040 PF03743 Bacterial conjugation TrbI-like protein FY145_27045 PF00437 Type II/IV secretion system protein FY145_27050 PF00072 Response regulator receiver domain FY145_27050 PF00486 Transcriptional regulatory protein, C terminal FY145_27055 PF07181 VirC2 protein FY145_27060 PF07015 VirC1 protein FY145_27065 PF07328 T-DNA border endonuclease VirD1 FY145_27070 PF03432 Relaxase/Mobilisation nuclease domain FY145_27080 PF02534 Type IV secretory system Conjugative DNA transfer FY145_27100 PF12189 Single-strand DNA-binding protein FY145_27105 PF07229 VirE2 FY145_27125 PF05717 IS66 Orf2 like protein FY145_27130 PF03472 Autoinducer binding domain FY145_27130 PF00196 Bacterial regulatory proteins, luxR family FY145_27145 PF00459 Inositol monophosphatase family FY145_27180 PF02027 RolB/RolC glucosidase family FY145_27185 PF01425 Amidase FY145_27190 PF01593 Flavin containing amine oxidoreductase FY145_27190 PF02027 RolB/RolC glucosidase family FY145_27200 PF02027 RolB/RolC glucosidase family FY145_27205 PF01380 SIS domain FY145_27210 PF00300 Histidine phosphatase superfamily (branch 1) FY145_27210 PF00106 short chain dehydrogenase FY145_27215 PF01321 Creatinase/Prolidase N-terminal domain FY145_27215 PF00557 Metallopeptidase family M24 FY145_27235 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27240 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27245 PF00005 ABC transporter FY145_27245 PF08402 TOBE domain FY145_27275 PF00005 ABC transporter FY145_27275 PF08402 TOBE domain FY145_27280 PF01321 Creatinase/Prolidase N-terminal domain FY145_27280 PF00557 Metallopeptidase family M24 FY145_27285 PF00294 pfkB family carbohydrate kinase FY145_27300 PF00106 short chain dehydrogenase FY145_27305 PF00920 Dehydratase family FY145_27310 PF00248 Aldo/keto reductase family FY145_27325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_27330 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27330 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_27335 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27340 PF00005 ABC transporter FY145_27340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_27345 PF00300 Histidine phosphatase superfamily (branch 1) FY145_27345 PF00106 short chain dehydrogenase FY145_27350 PF01266 FAD dependent oxidoreductase FY145_27355 PF05378 Hydantoinase/oxoprolinase N-terminal region FY145_27355 PF01968 Hydantoinase/oxoprolinase FY145_27370 PF08220 DeoR-like helix-turn-helix domain FY145_27370 PF00455 DeoR C terminal sensor domain FY145_27380 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27385 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27385 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_27390 PF00005 ABC transporter FY145_27390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_27395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_27405 PF03743 Bacterial conjugation TrbI-like protein FY145_27415 PF03524 Conjugal transfer protein FY145_27420 PF04335 VirB8 protein FY145_27425 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY145_27430 PF10907 Protein of unknown function (DUF2749) FY145_27440 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY145_27445 PF05101 Type IV secretory pathway, VirB3-like protein FY145_27450 PF04956 TrbC/VIRB2 family FY145_27455 PF00437 Type II/IV secretion system protein FY145_27460 PF00765 Autoinducer synthase FY145_27465 PF13614 AAA domain FY145_27470 PF07506 RepB plasmid partitioning protein FY145_27470 PF02195 ParB-like nuclease domain FY145_27475 PF11800 Replication protein C C-terminal region FY145_27475 PF03428 Replication protein C N-terminal domain FY145_27480 PF00239 Resolvase, N terminal domain FY145_27485 PF07756 Protein of unknown function (DUF1612) FY145_27485 PF11972 HTH DNA binding domain FY145_27505 PF08808 RES domain FY145_27525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_27525 PF03466 LysR substrate binding domain FY145_27535 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27540 PF00005 ABC transporter FY145_27545 PF09084 NMT1/THI5 like FY145_27550 PF00296 Luciferase-like monooxygenase FY145_27555 PF00296 Luciferase-like monooxygenase FY145_27565 PF00732 GMC oxidoreductase FY145_27565 PF05199 GMC oxidoreductase FY145_27570 PF00561 alpha/beta hydrolase fold FY145_27590 PF02653 Branched-chain amino acid transport system / permease component FY145_27595 PF00005 ABC transporter FY145_27605 PF00753 Metallo-beta-lactamase superfamily FY145_27610 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY145_27610 PF02770 Acyl-CoA dehydrogenase, middle domain FY145_27610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY145_27615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_27620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_27620 PF00005 ABC transporter FY145_27625 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_27625 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27630 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27640 PF00296 Luciferase-like monooxygenase FY145_27645 PF00296 Luciferase-like monooxygenase FY145_27650 PF03466 LysR substrate binding domain FY145_27650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_27660 PF01434 Peptidase family M41 FY145_27660 PF17862 AAA+ lid domain FY145_27660 PF00004 ATPase family associated with various cellular activities (AAA) FY145_27675 PF00005 ABC transporter FY145_27675 PF00664 ABC transporter transmembrane region FY145_27680 PF00005 ABC transporter FY145_27680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_27685 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_27685 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27690 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_27705 PF01261 Xylose isomerase-like TIM barrel FY145_27710 PF00291 Pyridoxal-phosphate dependent enzyme FY145_27715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY145_27725 PF02195 ParB-like nuclease domain FY145_27735 PF01842 ACT domain FY145_27735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY145_27735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY145_27740 PF00483 Nucleotidyl transferase FY145_27745 PF00155 Aminotransferase class I and II FY145_27770 PF13298 DNA polymerase Ligase (LigD) FY145_27770 PF04679 ATP dependent DNA ligase C terminal region FY145_27770 PF01068 ATP dependent DNA ligase domain FY145_27785 PF14579 Helix-hairpin-helix motif FY145_27785 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY145_27785 PF02811 PHP domain FY145_27785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY145_27800 PF02661 Fic/DOC family FY145_27800 PF17841 BID domain of Bartonella effector protein (Bep) FY145_27825 PF02195 ParB-like nuclease domain FY145_27825 PF17762 HTH domain found in ParB protein FY145_27850 PF08274 PhnA Zinc-Ribbon FY145_27850 PF03831 PhnA domain FY145_27875 PF05284 Protein of unknown function (DUF736) FY145_27880 PF00216 Bacterial DNA-binding protein FY145_27900 PF02534 Type IV secretory system Conjugative DNA transfer FY145_27905 PF06412 Conjugal transfer protein TraD FY145_27910 PF07820 TraC-like protein FY145_27915 PF17841 BID domain of Bartonella effector protein (Bep) FY145_27915 PF03389 MobA/MobL family FY145_27915 PF01443 Viral (Superfamily 1) RNA helicase FY145_27920 PF10502 Signal peptidase, peptidase S26 FY145_27925 PF00795 Carbon-nitrogen hydrolase FY145_27930 PF06871 TraH_2 FY145_27935 PF03466 LysR substrate binding domain FY145_27935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_27940 PF00005 ABC transporter FY145_27945 PF00528 Binding-protein-dependent transport system inner membrane component FY145_27950 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_27955 PF00296 Luciferase-like monooxygenase FY145_27960 PF00296 Luciferase-like monooxygenase FY145_27970 PF09228 Prokaryotic Transcriptional repressor TraM FY145_27980 PF03472 Autoinducer binding domain FY145_27980 PF00196 Bacterial regulatory proteins, luxR family FY145_27985 PF00128 Alpha amylase, catalytic domain FY145_27995 PF02690 Na+/Pi-cotransporter FY145_28015 PF00459 Inositol monophosphatase family FY145_28020 PF03009 Glycerophosphoryl diester phosphodiesterase family FY145_28025 PF03009 Glycerophosphoryl diester phosphodiesterase family FY145_28030 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_28030 PF00528 Binding-protein-dependent transport system inner membrane component FY145_28035 PF00528 Binding-protein-dependent transport system inner membrane component FY145_28040 PF00005 ABC transporter FY145_28040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_28045 PF00005 ABC transporter FY145_28045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_28050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_28055 PF00455 DeoR C terminal sensor domain FY145_28055 PF08220 DeoR-like helix-turn-helix domain FY145_28060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_28065 PF08220 DeoR-like helix-turn-helix domain FY145_28065 PF00455 DeoR C terminal sensor domain FY145_28070 PF00528 Binding-protein-dependent transport system inner membrane component FY145_28070 PF12911 N-terminal TM domain of oligopeptide transport permease C FY145_28075 PF00528 Binding-protein-dependent transport system inner membrane component FY145_28085 PF00005 ABC transporter FY145_28085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_28090 PF00005 ABC transporter FY145_28090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY145_28095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY145_28100 PF00300 Histidine phosphatase superfamily (branch 1) FY145_28105 PF00325 Bacterial regulatory proteins, crp family FY145_28105 PF04198 Putative sugar-binding domain FY145_28110 PF03472 Autoinducer binding domain FY145_28110 PF00196 Bacterial regulatory proteins, luxR family FY145_28120 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY145_28125 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY145_28130 PF00491 Arginase family FY145_28135 PF04324 BFD-like [2Fe-2S] binding domain FY145_28135 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY145_28145 PF01266 FAD dependent oxidoreductase FY145_28150 PF05378 Hydantoinase/oxoprolinase N-terminal region FY145_28150 PF01968 Hydantoinase/oxoprolinase FY145_28160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_28160 PF03466 LysR substrate binding domain FY145_28165 PF00528 Binding-protein-dependent transport system inner membrane component FY145_28170 PF00528 Binding-protein-dependent transport system inner membrane component FY145_28175 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY145_28180 PF00005 ABC transporter FY145_28185 PF03466 LysR substrate binding domain FY145_28185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY145_28190 PF03743 Bacterial conjugation TrbI-like protein FY145_28200 PF03524 Conjugal transfer protein FY145_28205 PF04335 VirB8 protein FY145_28210 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY145_28215 PF10907 Protein of unknown function (DUF2749) FY145_28225 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY145_28230 PF05101 Type IV secretory pathway, VirB3-like protein FY145_28235 PF04956 TrbC/VIRB2 family FY145_28240 PF00437 Type II/IV secretion system protein FY145_28245 PF00765 Autoinducer synthase