locus-tag class description FY146_00005 PF00308 Bacterial dnaA protein FY146_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY146_00005 PF11638 DnaA N-terminal domain FY146_00010 PF06969 HemN C-terminal domain FY146_00010 PF04055 Radical SAM superfamily FY146_00015 PF01725 Ham1 family FY146_00020 PF01138 3' exoribonuclease family, domain 1 FY146_00020 PF03725 3' exoribonuclease family, domain 2 FY146_00025 PF01628 HrcA protein C terminal domain FY146_00030 PF01025 GrpE FY146_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY146_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY146_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY146_00045 PF04552 Sigma-54, DNA binding domain FY146_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY146_00045 PF04963 Sigma-54 factor, core binding domain FY146_00050 PF00005 ABC transporter FY146_00055 PF03968 OstA-like protein FY146_00065 PF01343 Peptidase family S49 FY146_00070 PF00216 Bacterial DNA-binding protein FY146_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY146_00080 PF17785 PUA-like domain FY146_00085 PF00588 SpoU rRNA Methylase family FY146_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY146_00090 PF01252 Signal peptidase (SPase) II FY146_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY146_00095 PF00072 Response regulator receiver domain FY146_00095 PF01627 Hpt domain FY146_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_00095 PF00672 HAMP domain FY146_00095 PF00512 His Kinase A (phospho-acceptor) domain FY146_00105 PF01624 MutS domain I FY146_00105 PF05188 MutS domain II FY146_00105 PF05192 MutS domain III FY146_00105 PF05190 MutS family domain IV FY146_00105 PF00488 MutS domain V FY146_00110 PF01842 ACT domain FY146_00110 PF08335 GlnD PII-uridylyltransferase FY146_00110 PF01966 HD domain FY146_00110 PF01909 Nucleotidyltransferase domain FY146_00115 PF03023 Lipid II flippase MurJ FY146_00125 PF00579 tRNA synthetases class I (W and Y) FY146_00135 PF01106 NifU-like domain FY146_00140 PF00814 Glycoprotease family FY146_00150 PF01475 Ferric uptake regulator family FY146_00155 PF01553 Acyltransferase FY146_00160 PF04055 Radical SAM superfamily FY146_00160 PF01938 TRAM domain FY146_00160 PF00919 Uncharacterized protein family UPF0004 FY146_00165 PF02562 PhoH-like protein FY146_00170 PF02130 Uncharacterized protein family UPF0054 FY146_00175 PF00571 CBS domain FY146_00175 PF03471 Transporter associated domain FY146_00180 PF00795 Carbon-nitrogen hydrolase FY146_00185 PF01381 Helix-turn-helix FY146_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY146_00190 PF02772 S-adenosylmethionine synthetase, central domain FY146_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY146_00195 PF02390 Putative methyltransferase FY146_00200 PF00294 pfkB family carbohydrate kinase FY146_00205 PF02646 RmuC family FY146_00210 PF01327 Polypeptide deformylase FY146_00215 PF02911 Formyl transferase, C-terminal domain FY146_00215 PF00551 Formyl transferase FY146_00220 PF01416 tRNA pseudouridine synthase FY146_00230 PF07687 Peptidase dimerisation domain FY146_00230 PF01546 Peptidase family M20/M25/M40 FY146_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY146_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY146_00245 PF00672 HAMP domain FY146_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY146_00255 PF00011 Hsp20/alpha crystallin family FY146_00280 PF00696 Amino acid kinase family FY146_00290 PF01926 50S ribosome-binding GTPase FY146_00295 PF14849 YidC periplasmic domain FY146_00295 PF02096 60Kd inner membrane protein FY146_00300 PF00825 Ribonuclease P FY146_00305 PF00468 Ribosomal protein L34 FY146_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_00310 PF00672 HAMP domain FY146_00315 PF00512 His Kinase A (phospho-acceptor) domain FY146_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_00325 PF01209 ubiE/COQ5 methyltransferase family FY146_00330 PF00005 ABC transporter FY146_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY146_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY146_00350 PF00149 Calcineurin-like phosphoesterase FY146_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY146_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY146_00365 PF05544 Proline racemase FY146_00370 PF01979 Amidohydrolase family FY146_00375 PF00156 Phosphoribosyl transferase domain FY146_00380 PF00294 pfkB family carbohydrate kinase FY146_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY146_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY146_00400 PF00342 Phosphoglucose isomerase FY146_00405 PF00501 AMP-binding enzyme FY146_00405 PF13193 AMP-binding enzyme C-terminal domain FY146_00410 PF08402 TOBE domain FY146_00410 PF00005 ABC transporter FY146_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY146_00425 PF07715 TonB-dependent Receptor Plug Domain FY146_00425 PF00593 TonB dependent receptor FY146_00445 PF01679 Proteolipid membrane potential modulator FY146_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY146_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_00475 PF00512 His Kinase A (phospho-acceptor) domain FY146_00475 PF00989 PAS fold FY146_00475 PF16736 Single Cache-like FY146_00480 PF12849 PBP superfamily domain FY146_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY146_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY146_00495 PF00005 ABC transporter FY146_00500 PF01895 PhoU domain FY146_00505 PF00486 Transcriptional regulatory protein, C terminal FY146_00505 PF00072 Response regulator receiver domain FY146_00515 PF00202 Aminotransferase class-III FY146_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY146_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY146_00525 PF01430 Hsp33 protein FY146_00530 PF04379 ApaG domain FY146_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY146_00545 PF00692 dUTPase FY146_00555 PF00589 Phage integrase family FY146_00555 PF13356 Arm DNA-binding domain FY146_00565 PF00239 Resolvase, N terminal domain FY146_00565 PF02796 Helix-turn-helix domain of resolvase FY146_00580 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FY146_00600 PF08671 Anti-repressor SinI FY146_00600 PF01381 Helix-turn-helix FY146_00640 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY146_00645 PF00230 Major intrinsic protein FY146_00685 PF00196 Bacterial regulatory proteins, luxR family FY146_00685 PF00072 Response regulator receiver domain FY146_00695 PF01180 Dihydroorotate dehydrogenase FY146_00730 PF02082 Transcriptional regulator FY146_00735 PF08494 DEAD/H associated FY146_00735 PF00271 Helicase conserved C-terminal domain FY146_00735 PF00270 DEAD/DEAH box helicase FY146_00755 PF01925 Sulfite exporter TauE/SafE FY146_00765 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_00765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_00765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_00765 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY146_00770 PF02803 Thiolase, C-terminal domain FY146_00770 PF00108 Thiolase, N-terminal domain FY146_00780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY146_00780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY146_00780 PF00378 Enoyl-CoA hydratase/isomerase FY146_00805 PF03334 Na+/H+ antiporter subunit FY146_00810 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY146_00815 PF01899 Na+/H+ ion antiporter subunit FY146_00820 PF00361 Proton-conducting membrane transporter FY146_00825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY146_00830 PF13244 Domain of unknown function (DUF4040) FY146_00830 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY146_00830 PF00361 Proton-conducting membrane transporter FY146_00830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY146_00840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_00850 PF00072 Response regulator receiver domain FY146_00855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_00855 PF02895 Signal transducing histidine kinase, homodimeric domain FY146_00855 PF01584 CheW-like domain FY146_00855 PF01627 Hpt domain FY146_00860 PF03705 CheR methyltransferase, all-alpha domain FY146_00860 PF01739 CheR methyltransferase, SAM binding domain FY146_00865 PF00072 Response regulator receiver domain FY146_00865 PF01339 CheB methylesterase FY146_00870 PF00072 Response regulator receiver domain FY146_00875 PF03975 CheD chemotactic sensory transduction FY146_00885 PF08345 Flagellar M-ring protein C-terminal FY146_00885 PF01514 Secretory protein of YscJ/FliF family FY146_00890 PF03472 Autoinducer binding domain FY146_00890 PF00196 Bacterial regulatory proteins, luxR family FY146_00900 PF00672 HAMP domain FY146_00900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_00905 PF01627 Hpt domain FY146_00905 PF00072 Response regulator receiver domain FY146_00905 PF00672 HAMP domain FY146_00905 PF00512 His Kinase A (phospho-acceptor) domain FY146_00910 PF01741 Large-conductance mechanosensitive channel, MscL FY146_00915 PF00155 Aminotransferase class I and II FY146_00920 PF01370 NAD dependent epimerase/dehydratase family FY146_00930 PF03884 DNA gyrase inhibitor YacG FY146_00935 PF02545 Maf-like protein FY146_00940 PF01176 Translation initiation factor 1A / IF-1 FY146_00950 PF06793 Uncharacterised protein family (UPF0262) FY146_00955 PF00815 Histidinol dehydrogenase FY146_00965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY146_01100 PF03592 Terminase small subunit FY146_01100 PF10668 Phage terminase small subunit FY146_01150 PF07724 AAA domain (Cdc48 subfamily) FY146_01150 PF10431 C-terminal, D2-small domain, of ClpB protein FY146_01150 PF06689 ClpX C4-type zinc finger FY146_01235 PF00589 Phage integrase family FY146_01240 PF00700 Bacterial flagellin C-terminal helical region FY146_01240 PF00669 Bacterial flagellin N-terminal helical region FY146_01245 PF00669 Bacterial flagellin N-terminal helical region FY146_01245 PF00700 Bacterial flagellin C-terminal helical region FY146_01250 PF00700 Bacterial flagellin C-terminal helical region FY146_01250 PF00669 Bacterial flagellin N-terminal helical region FY146_01255 PF00813 FliP family FY146_01265 PF02107 Flagellar L-ring protein FY146_01275 PF02119 Flagellar P-ring protein FY146_01280 PF13144 Chaperone for flagella basal body P-ring formation FY146_01285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY146_01285 PF00460 Flagella basal body rod protein FY146_01290 PF02049 Flagellar hook-basal body complex protein FliE FY146_01295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY146_01300 PF00460 Flagella basal body rod protein FY146_01310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY146_01310 PF18269 T3SS EscN ATPase C-terminal domain FY146_01315 PF00460 Flagella basal body rod protein FY146_01315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY146_01325 PF01618 MotA/TolQ/ExbB proton channel family FY146_01330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY146_01335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY146_01340 PF14841 FliG middle domain FY146_01340 PF14842 FliG N-terminal domain FY146_01340 PF01706 FliG C-terminal domain FY146_01345 PF01312 FlhB HrpN YscU SpaS Family FY146_01355 PF00700 Bacterial flagellin C-terminal helical region FY146_01355 PF00669 Bacterial flagellin N-terminal helical region FY146_01365 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY146_01365 PF00691 OmpA family FY146_01375 PF02120 Flagellar hook-length control protein FliK FY146_01385 PF00486 Transcriptional regulatory protein, C terminal FY146_01390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY146_01390 PF00460 Flagella basal body rod protein FY146_01390 PF07559 Flagellar basal body protein FlaE FY146_01410 PF07378 Flagellar protein FlbT FY146_01415 PF03963 Flagellar hook capping protein - N-terminal region FY146_01420 PF01313 Bacterial export proteins, family 3 FY146_01425 PF00771 FHIPEP family FY146_01430 PF01311 Bacterial export proteins, family 1 FY146_01465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY146_01465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY146_01470 PF00356 Bacterial regulatory proteins, lacI family FY146_01475 PF01547 Bacterial extracellular solute-binding protein FY146_01480 PF00528 Binding-protein-dependent transport system inner membrane component FY146_01485 PF00528 Binding-protein-dependent transport system inner membrane component FY146_01490 PF00128 Alpha amylase, catalytic domain FY146_01495 PF00005 ABC transporter FY146_01495 PF17912 MalK OB fold domain FY146_01495 PF03459 TOBE domain FY146_01510 PF00920 Dehydratase family FY146_01515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY146_01520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY146_01520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY146_01525 PF01266 FAD dependent oxidoreductase FY146_01530 PF00120 Glutamine synthetase, catalytic domain FY146_01555 PF00463 Isocitrate lyase family FY146_01560 PF06114 IrrE N-terminal-like domain FY146_01560 PF09856 Predicted transcriptional regulator (DUF2083) FY146_01560 PF01381 Helix-turn-helix FY146_01565 PF13416 Bacterial extracellular solute-binding protein FY146_01570 PF08402 TOBE domain FY146_01570 PF00005 ABC transporter FY146_01575 PF00528 Binding-protein-dependent transport system inner membrane component FY146_01580 PF00528 Binding-protein-dependent transport system inner membrane component FY146_01595 PF00989 PAS fold FY146_01595 PF13188 PAS domain FY146_01595 PF13426 PAS domain FY146_01595 PF00512 His Kinase A (phospho-acceptor) domain FY146_01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_01605 PF02541 Ppx/GppA phosphatase family FY146_01610 PF01728 FtsJ-like methyltransferase FY146_01615 PF07690 Major Facilitator Superfamily FY146_01620 PF00753 Metallo-beta-lactamase superfamily FY146_01625 PF00478 IMP dehydrogenase / GMP reductase domain FY146_01625 PF00571 CBS domain FY146_01635 PF08240 Alcohol dehydrogenase GroES-like domain FY146_01635 PF00107 Zinc-binding dehydrogenase FY146_01640 PF01738 Dienelactone hydrolase family FY146_01645 PF00994 Probable molybdopterin binding domain FY146_01650 PF08544 GHMP kinases C terminal FY146_01650 PF00288 GHMP kinases N terminal domain FY146_01660 PF00348 Polyprenyl synthetase FY146_01675 PF06965 Na+/H+ antiporter 1 FY146_01675 PF01343 Peptidase family S49 FY146_01685 PF02091 Glycyl-tRNA synthetase alpha subunit FY146_01695 PF04011 LemA family FY146_01700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY146_01710 PF05746 DALR anticodon binding domain FY146_01710 PF02092 Glycyl-tRNA synthetase beta subunit FY146_01715 PF04463 Protein of unknown function (DUF523) FY146_01720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_01720 PF00672 HAMP domain FY146_01720 PF17200 Single Cache domain 2 FY146_01730 PF02844 Phosphoribosylglycinamide synthetase, N domain FY146_01730 PF02843 Phosphoribosylglycinamide synthetase, C domain FY146_01730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY146_01735 PF00575 S1 RNA binding domain FY146_01735 PF17674 HHH domain FY146_01735 PF16921 Tex protein YqgF-like domain FY146_01735 PF09371 Tex-like protein N-terminal domain FY146_01750 PF01040 UbiA prenyltransferase family FY146_01765 PF03466 LysR substrate binding domain FY146_01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_01775 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY146_01780 PF04452 RNA methyltransferase FY146_01785 PF01384 Phosphate transporter family FY146_01795 PF05116 Sucrose-6F-phosphate phosphohydrolase FY146_01800 PF00534 Glycosyl transferases group 1 FY146_01800 PF13439 Glycosyltransferase Family 4 FY146_01805 PF00392 Bacterial regulatory proteins, gntR family FY146_01805 PF07729 FCD domain FY146_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_01815 PF03466 LysR substrate binding domain FY146_01820 PF02913 FAD linked oxidases, C-terminal domain FY146_01820 PF01565 FAD binding domain FY146_01825 PF02913 FAD linked oxidases, C-terminal domain FY146_01825 PF01565 FAD binding domain FY146_01830 PF02754 Cysteine-rich domain FY146_01830 PF13183 4Fe-4S dicluster domain FY146_01840 PF17969 L,D-transpeptidase C-terminal domain FY146_01840 PF03734 L,D-transpeptidase catalytic domain FY146_01845 PF03352 Methyladenine glycosylase FY146_01855 PF03601 Conserved hypothetical protein 698 FY146_01860 PF03466 LysR substrate binding domain FY146_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_01890 PF13393 Histidyl-tRNA synthetase FY146_01890 PF03129 Anticodon binding domain FY146_01900 PF13393 Histidyl-tRNA synthetase FY146_01905 PF01634 ATP phosphoribosyltransferase FY146_01910 PF07681 DoxX FY146_01920 PF00118 TCP-1/cpn60 chaperonin family FY146_01925 PF00166 Chaperonin 10 Kd subunit FY146_01935 PF06574 FAD synthetase FY146_01935 PF01687 Riboflavin kinase FY146_01940 PF08264 Anticodon-binding domain of tRNA FY146_01940 PF00133 tRNA synthetases class I (I, L, M and V) FY146_01950 PF14437 MafB19-like deaminase FY146_01955 PF00849 RNA pseudouridylate synthase FY146_01955 PF01479 S4 domain FY146_01965 PF01734 Patatin-like phospholipase FY146_01970 PF00999 Sodium/hydrogen exchanger family FY146_01970 PF02254 TrkA-N domain FY146_01975 PF01523 Putative modulator of DNA gyrase FY146_01980 PF00459 Inositol monophosphatase family FY146_01990 PF00534 Glycosyl transferases group 1 FY146_01990 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY146_02000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY146_02010 PF08676 MutL C terminal dimerisation domain FY146_02010 PF01119 DNA mismatch repair protein, C-terminal domain FY146_02015 PF00486 Transcriptional regulatory protein, C terminal FY146_02015 PF00072 Response regulator receiver domain FY146_02020 PF03707 Bacterial signalling protein N terminal repeat FY146_02020 PF13188 PAS domain FY146_02020 PF00563 EAL domain FY146_02020 PF00990 Diguanylate cyclase, GGDEF domain FY146_02025 PF08450 SMP-30/Gluconolactonase/LRE-like region FY146_02030 PF01081 KDPG and KHG aldolase FY146_02035 PF05035 2-keto-3-deoxy-galactonokinase FY146_02045 PF09339 IclR helix-turn-helix domain FY146_02045 PF01614 Bacterial transcriptional regulator FY146_02050 PF03472 Autoinducer binding domain FY146_02050 PF00196 Bacterial regulatory proteins, luxR family FY146_02060 PF10609 NUBPL iron-transfer P-loop NTPase FY146_02065 PF01544 CorA-like Mg2+ transporter protein FY146_02070 PF02705 K+ potassium transporter FY146_02085 PF00119 ATP synthase A chain FY146_02090 PF00137 ATP synthase subunit C FY146_02095 PF00430 ATP synthase B/B' CF(0) FY146_02100 PF00430 ATP synthase B/B' CF(0) FY146_02105 PF09828 Chromate resistance exported protein FY146_02110 PF02417 Chromate transporter FY146_02115 PF01351 Ribonuclease HII FY146_02130 PF02913 FAD linked oxidases, C-terminal domain FY146_02130 PF01565 FAD binding domain FY146_02135 PF03481 Putative GTP-binding controlling metal-binding FY146_02135 PF01300 Telomere recombination FY146_02145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY146_02145 PF00355 Rieske [2Fe-2S] domain FY146_02150 PF00970 Oxidoreductase FAD-binding domain FY146_02150 PF00111 2Fe-2S iron-sulfur cluster binding domain FY146_02150 PF00175 Oxidoreductase NAD-binding domain FY146_02155 PF07886 BA14K-like protein FY146_02160 PF07886 BA14K-like protein FY146_02170 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY146_02170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_02170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_02170 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_02185 PF05958 tRNA (Uracil-5-)-methyltransferase FY146_02190 PF01728 FtsJ-like methyltransferase FY146_02190 PF01479 S4 domain FY146_02195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_02195 PF02203 Tar ligand binding domain homologue FY146_02195 PF00672 HAMP domain FY146_02205 PF01037 Lrp/AsnC ligand binding domain FY146_02230 PF02780 Transketolase, C-terminal domain FY146_02230 PF02779 Transketolase, pyrimidine binding domain FY146_02230 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY146_02235 PF05726 Pirin C-terminal cupin domain FY146_02235 PF02678 Pirin FY146_02240 PF02609 Exonuclease VII small subunit FY146_02245 PF00850 Histone deacetylase domain FY146_02250 PF02632 BioY family FY146_02255 PF02361 Cobalt transport protein FY146_02260 PF00005 ABC transporter FY146_02265 PF06224 Winged helix DNA-binding domain FY146_02270 PF00925 GTP cyclohydrolase II FY146_02270 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY146_02275 PF01264 Chorismate synthase FY146_02290 PF00300 Histidine phosphatase superfamily (branch 1) FY146_02300 PF00684 DnaJ central domain FY146_02300 PF01556 DnaJ C terminal domain FY146_02300 PF00226 DnaJ domain FY146_02310 PF01243 Pyridoxamine 5'-phosphate oxidase FY146_02310 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY146_02330 PF13419 Haloacid dehalogenase-like hydrolase FY146_02340 PF01523 Putative modulator of DNA gyrase FY146_02350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY146_02350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY146_02355 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY146_02360 PF01040 UbiA prenyltransferase family FY146_02365 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY146_02370 PF00510 Cytochrome c oxidase subunit III FY146_02380 PF02104 SURF1 family FY146_02385 PF02401 LytB protein FY146_02390 PF01636 Phosphotransferase enzyme family FY146_02395 PF00075 RNase H FY146_02405 PF00462 Glutaredoxin FY146_02405 PF08534 Redoxin FY146_02415 PF02622 Uncharacterized ACR, COG1678 FY146_02420 PF05532 CsbD-like FY146_02425 PF10005 zinc-ribbon domain FY146_02425 PF15887 Putative zinc-binding metallo-peptidase FY146_02430 PF03707 Bacterial signalling protein N terminal repeat FY146_02430 PF00990 Diguanylate cyclase, GGDEF domain FY146_02430 PF13188 PAS domain FY146_02430 PF00563 EAL domain FY146_02435 PF13302 Acetyltransferase (GNAT) domain FY146_02440 PF00675 Insulinase (Peptidase family M16) FY146_02440 PF05193 Peptidase M16 inactive domain FY146_02445 PF00291 Pyridoxal-phosphate dependent enzyme FY146_02445 PF14821 Threonine synthase N terminus FY146_02465 PF13419 Haloacid dehalogenase-like hydrolase FY146_02470 PF07729 FCD domain FY146_02470 PF00392 Bacterial regulatory proteins, gntR family FY146_02485 PF01555 DNA methylase FY146_02485 PF18755 Restriction Enzyme Adenine Methylase Associated FY146_02490 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY146_02495 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY146_02505 PF00730 HhH-GPD superfamily base excision DNA repair protein FY146_02505 PF14815 NUDIX domain FY146_02520 PF13462 Thioredoxin FY146_02525 PF02463 RecF/RecN/SMC N terminal domain FY146_02530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_02535 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY146_02535 PF02896 PEP-utilising enzyme, TIM barrel domain FY146_02535 PF00391 PEP-utilising enzyme, mobile domain FY146_02545 PF00375 Sodium:dicarboxylate symporter family FY146_02570 PF06039 Malate:quinone oxidoreductase (Mqo) FY146_02585 PF00009 Elongation factor Tu GTP binding domain FY146_02590 PF01507 Phosphoadenosine phosphosulfate reductase family FY146_02595 PF01507 Phosphoadenosine phosphosulfate reductase family FY146_02600 PF02082 Transcriptional regulator FY146_02610 PF00528 Binding-protein-dependent transport system inner membrane component FY146_02615 PF00528 Binding-protein-dependent transport system inner membrane component FY146_02620 PF00005 ABC transporter FY146_02620 PF12857 TOBE-like domain FY146_02625 PF14765 Polyketide synthase dehydratase FY146_02625 PF00107 Zinc-binding dehydrogenase FY146_02625 PF00550 Phosphopantetheine attachment site FY146_02625 PF00698 Acyl transferase domain FY146_02625 PF16197 Ketoacyl-synthetase C-terminal extension FY146_02625 PF00109 Beta-ketoacyl synthase, N-terminal domain FY146_02625 PF02801 Beta-ketoacyl synthase, C-terminal domain FY146_02625 PF08240 Alcohol dehydrogenase GroES-like domain FY146_02625 PF08659 KR domain FY146_02630 PF00563 EAL domain FY146_02630 PF01590 GAF domain FY146_02630 PF00990 Diguanylate cyclase, GGDEF domain FY146_02630 PF00989 PAS fold FY146_02640 PF13977 BetI-type transcriptional repressor, C-terminal FY146_02640 PF00440 Bacterial regulatory proteins, tetR family FY146_02645 PF00171 Aldehyde dehydrogenase family FY146_02650 PF00732 GMC oxidoreductase FY146_02650 PF05199 GMC oxidoreductase FY146_02680 PF02798 Glutathione S-transferase, N-terminal domain FY146_02680 PF00043 Glutathione S-transferase, C-terminal domain FY146_02690 PF07690 Major Facilitator Superfamily FY146_02700 PF05973 Phage derived protein Gp49-like (DUF891) FY146_02710 PF04675 DNA ligase N terminus FY146_02710 PF01068 ATP dependent DNA ligase domain FY146_02710 PF04679 ATP dependent DNA ligase C terminal region FY146_02720 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY146_02725 PF00403 Heavy-metal-associated domain FY146_02730 PF17969 L,D-transpeptidase C-terminal domain FY146_02730 PF03734 L,D-transpeptidase catalytic domain FY146_02735 PF17969 L,D-transpeptidase C-terminal domain FY146_02735 PF03734 L,D-transpeptidase catalytic domain FY146_02740 PF01047 MarR family FY146_02745 PF02566 OsmC-like protein FY146_02760 PF12848 ABC transporter FY146_02760 PF00005 ABC transporter FY146_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_02790 PF03466 LysR substrate binding domain FY146_02795 PF00106 short chain dehydrogenase FY146_02810 PF05872 Bacterial protein of unknown function (DUF853) FY146_02820 PF01638 HxlR-like helix-turn-helix FY146_02825 PF00106 short chain dehydrogenase FY146_02830 PF12833 Helix-turn-helix domain FY146_02840 PF00248 Aldo/keto reductase family FY146_02845 PF01062 Bestrophin, RFP-TM, chloride channel FY146_02850 PF08279 HTH domain FY146_02850 PF13280 WYL domain FY146_02865 PF01063 Amino-transferase class IV FY146_02870 PF00672 HAMP domain FY146_02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_02875 PF03466 LysR substrate binding domain FY146_02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_02890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY146_02890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY146_02905 PF01810 LysE type translocator FY146_02910 PF01322 Cytochrome C' FY146_02915 PF00034 Cytochrome c FY146_02945 PF00561 alpha/beta hydrolase fold FY146_02950 PF00376 MerR family regulatory protein FY146_02950 PF09278 MerR, DNA binding FY146_02960 PF02583 Metal-sensitive transcriptional repressor FY146_02975 PF00005 ABC transporter FY146_02975 PF00571 CBS domain FY146_02980 PF00528 Binding-protein-dependent transport system inner membrane component FY146_02990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY146_02990 PF00326 Prolyl oligopeptidase family FY146_03000 PF00701 Dihydrodipicolinate synthetase family FY146_03010 PF02805 Metal binding domain of Ada FY146_03010 PF12833 Helix-turn-helix domain FY146_03010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY146_03010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY146_03015 PF01594 AI-2E family transporter FY146_03020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_03040 PF03006 Haemolysin-III related FY146_03050 PF01810 LysE type translocator FY146_03055 PF01641 SelR domain FY146_03060 PF13244 Domain of unknown function (DUF4040) FY146_03060 PF00361 Proton-conducting membrane transporter FY146_03060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY146_03065 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY146_03070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY146_03075 PF00361 Proton-conducting membrane transporter FY146_03080 PF01899 Na+/H+ ion antiporter subunit FY146_03085 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY146_03090 PF03334 Na+/H+ antiporter subunit FY146_03095 PF05443 ROS/MUCR transcriptional regulator protein FY146_03110 PF02657 Fe-S metabolism associated domain FY146_03115 PF17264 Family of unknown function (DUF5330) FY146_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_03120 PF00512 His Kinase A (phospho-acceptor) domain FY146_03155 PF01810 LysE type translocator FY146_03160 PF03466 LysR substrate binding domain FY146_03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_03165 PF00912 Transglycosylase FY146_03165 PF00905 Penicillin binding protein transpeptidase domain FY146_03170 PF03692 Putative zinc- or iron-chelating domain FY146_03175 PF00905 Penicillin binding protein transpeptidase domain FY146_03185 PF00403 Heavy-metal-associated domain FY146_03190 PF09278 MerR, DNA binding FY146_03190 PF00376 MerR family regulatory protein FY146_03215 PF07690 Major Facilitator Superfamily FY146_03220 PF08244 Glycosyl hydrolases family 32 C terminal FY146_03220 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY146_03225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY146_03235 PF01037 Lrp/AsnC ligand binding domain FY146_03235 PF13404 AsnC-type helix-turn-helix domain FY146_03275 PF04860 Phage portal protein FY146_03365 PF00486 Transcriptional regulatory protein, C terminal FY146_03365 PF00072 Response regulator receiver domain FY146_03370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_03385 PF03100 CcmE FY146_03390 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY146_03390 PF01578 Cytochrome C assembly protein FY146_03395 PF03918 Cytochrome C biogenesis protein FY146_03400 PF13180 PDZ domain FY146_03405 PF00072 Response regulator receiver domain FY146_03405 PF00486 Transcriptional regulatory protein, C terminal FY146_03410 PF00672 HAMP domain FY146_03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_03410 PF00512 His Kinase A (phospho-acceptor) domain FY146_03415 PF04134 Protein of unknown function, DUF393 FY146_03420 PF06629 MltA-interacting protein MipA FY146_03425 PF08335 GlnD PII-uridylyltransferase FY146_03425 PF03710 Glutamate-ammonia ligase adenylyltransferase FY146_03430 PF00989 PAS fold FY146_03430 PF00512 His Kinase A (phospho-acceptor) domain FY146_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_03440 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY146_03440 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY146_03440 PF01433 Peptidase family M1 domain FY146_03445 PF00892 EamA-like transporter family FY146_03460 PF00012 Hsp70 protein FY146_03465 PF00990 Diguanylate cyclase, GGDEF domain FY146_03495 PF00107 Zinc-binding dehydrogenase FY146_03495 PF08240 Alcohol dehydrogenase GroES-like domain FY146_03500 PF01638 HxlR-like helix-turn-helix FY146_03505 PF02673 Bacitracin resistance protein BacA FY146_03510 PF03448 MgtE intracellular N domain FY146_03510 PF01769 Divalent cation transporter FY146_03510 PF00571 CBS domain FY146_03515 PF07690 Major Facilitator Superfamily FY146_03520 PF00781 Diacylglycerol kinase catalytic domain FY146_03525 PF00202 Aminotransferase class-III FY146_03540 PF01048 Phosphorylase superfamily FY146_03540 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY146_03565 PF00155 Aminotransferase class I and II FY146_03575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_03575 PF14759 Reductase C-terminal FY146_03580 PF03328 HpcH/HpaI aldolase/citrate lyase family FY146_03595 PF02530 Porin subfamily FY146_03600 PF02530 Porin subfamily FY146_03605 PF01464 Transglycosylase SLT domain FY146_03605 PF14718 Soluble lytic murein transglycosylase L domain FY146_03610 PF00701 Dihydrodipicolinate synthetase family FY146_03615 PF01668 SmpB protein FY146_03620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_03630 PF01192 RNA polymerase Rpb6 FY146_03635 PF13291 ACT domain FY146_03635 PF04607 Region found in RelA / SpoT proteins FY146_03635 PF02824 TGS domain FY146_03650 PF01648 4'-phosphopantetheinyl transferase superfamily FY146_03655 PF10502 Signal peptidase, peptidase S26 FY146_03660 PF14622 Ribonuclease-III-like FY146_03660 PF00035 Double-stranded RNA binding motif FY146_03665 PF07650 KH domain FY146_03665 PF01926 50S ribosome-binding GTPase FY146_03675 PF00072 Response regulator receiver domain FY146_03680 PF02565 Recombination protein O C terminal FY146_03680 PF11967 Recombination protein O N terminal FY146_03685 PF07690 Major Facilitator Superfamily FY146_03690 PF08241 Methyltransferase domain FY146_03700 PF01966 HD domain FY146_03710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_03720 PF00005 ABC transporter FY146_03725 PF00528 Binding-protein-dependent transport system inner membrane component FY146_03730 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY146_03735 PF00924 Mechanosensitive ion channel FY146_03735 PF05552 Conserved TM helix FY146_03745 PF01966 HD domain FY146_03750 PF01571 Aminomethyltransferase folate-binding domain FY146_03770 PF00293 NUDIX domain FY146_03775 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY146_03785 PF00990 Diguanylate cyclase, GGDEF domain FY146_03785 PF00072 Response regulator receiver domain FY146_03790 PF01066 CDP-alcohol phosphatidyltransferase FY146_03795 PF02666 Phosphatidylserine decarboxylase FY146_03800 PF00664 ABC transporter transmembrane region FY146_03800 PF00005 ABC transporter FY146_03810 PF03641 Possible lysine decarboxylase FY146_03815 PF00905 Penicillin binding protein transpeptidase domain FY146_03815 PF03717 Penicillin-binding Protein dimerisation domain FY146_03820 PF00892 EamA-like transporter family FY146_03825 PF00561 alpha/beta hydrolase fold FY146_03840 PF04480 Protein of unknown function (DUF559) FY146_03845 PF09190 DALR domain FY146_03845 PF01406 tRNA synthetases class I (C) catalytic domain FY146_03850 PF00106 short chain dehydrogenase FY146_03855 PF00156 Phosphoribosyl transferase domain FY146_03855 PF13537 Glutamine amidotransferase domain FY146_03860 PF02674 Colicin V production protein FY146_03865 PF06745 KaiC FY146_03865 PF18073 Rubredoxin metal binding domain FY146_03875 PF01168 Alanine racemase, N-terminal domain FY146_03875 PF00842 Alanine racemase, C-terminal domain FY146_03880 PF12833 Helix-turn-helix domain FY146_03880 PF12852 Cupin FY146_03885 PF03591 AzlC protein FY146_03895 PF00772 DnaB-like helicase N terminal domain FY146_03895 PF03796 DnaB-like helicase C terminal domain FY146_03910 PF13533 Biotin-lipoyl like FY146_03915 PF03948 Ribosomal protein L9, C-terminal domain FY146_03915 PF01281 Ribosomal protein L9, N-terminal domain FY146_03925 PF01084 Ribosomal protein S18 FY146_03930 PF01250 Ribosomal protein S6 FY146_03940 PF00248 Aldo/keto reductase family FY146_03945 PF00698 Acyl transferase domain FY146_03955 PF00550 Phosphopantetheine attachment site FY146_03960 PF00109 Beta-ketoacyl synthase, N-terminal domain FY146_03960 PF02801 Beta-ketoacyl synthase, C-terminal domain FY146_03970 PF02618 YceG-like family FY146_03975 PF08340 Domain of unknown function (DUF1732) FY146_03975 PF03755 YicC-like family, N-terminal region FY146_03980 PF00625 Guanylate kinase FY146_03995 PF00398 Ribosomal RNA adenine dimethylase FY146_04000 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY146_04010 PF04453 LPS transport system D FY146_04010 PF03968 OstA-like protein FY146_04025 PF00883 Cytosol aminopeptidase family, catalytic domain FY146_04025 PF02789 Cytosol aminopeptidase family, N-terminal domain FY146_04035 PF03707 Bacterial signalling protein N terminal repeat FY146_04035 PF00990 Diguanylate cyclase, GGDEF domain FY146_04035 PF00563 EAL domain FY146_04040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_04045 PF00563 EAL domain FY146_04045 PF01590 GAF domain FY146_04045 PF00990 Diguanylate cyclase, GGDEF domain FY146_04045 PF00360 Phytochrome region FY146_04050 PF00563 EAL domain FY146_04050 PF00990 Diguanylate cyclase, GGDEF domain FY146_04050 PF03707 Bacterial signalling protein N terminal repeat FY146_04055 PF00989 PAS fold FY146_04055 PF00512 His Kinase A (phospho-acceptor) domain FY146_04055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_04060 PF00196 Bacterial regulatory proteins, luxR family FY146_04060 PF00072 Response regulator receiver domain FY146_04070 PF00005 ABC transporter FY146_04070 PF12848 ABC transporter FY146_04075 PF00990 Diguanylate cyclase, GGDEF domain FY146_04075 PF17158 Membrane-associated sensor, integral membrane domain FY146_04080 PF13417 Glutathione S-transferase, N-terminal domain FY146_04085 PF00334 Nucleoside diphosphate kinase FY146_04105 PF02391 MoaE protein FY146_04115 PF01066 CDP-alcohol phosphatidyltransferase FY146_04120 PF01541 GIY-YIG catalytic domain FY146_04120 PF02151 UvrB/uvrC motif FY146_04120 PF08459 UvrC Helix-hairpin-helix N-terminal FY146_04130 PF13505 Outer membrane protein beta-barrel domain FY146_04140 PF00445 Ribonuclease T2 family FY146_04150 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY146_04155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY146_04155 PF00384 Molybdopterin oxidoreductase FY146_04155 PF01568 Molydopterin dinucleotide binding domain FY146_04160 PF00293 NUDIX domain FY146_04170 PF00551 Formyl transferase FY146_04175 PF00586 AIR synthase related protein, N-terminal domain FY146_04175 PF02769 AIR synthase related protein, C-terminal domain FY146_04180 PF01209 ubiE/COQ5 methyltransferase family FY146_04185 PF01594 AI-2E family transporter FY146_04195 PF02503 Polyphosphate kinase middle domain FY146_04195 PF13090 Polyphosphate kinase C-terminal domain 2 FY146_04195 PF17941 Polyphosphate kinase C-terminal domain 1 FY146_04195 PF13089 Polyphosphate kinase N-terminal domain FY146_04200 PF02541 Ppx/GppA phosphatase family FY146_04205 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_04225 PF00211 Adenylate and Guanylate cyclase catalytic domain FY146_04235 PF01612 3'-5' exonuclease FY146_04235 PF00570 HRDC domain FY146_04240 PF07690 Major Facilitator Superfamily FY146_04245 PF02938 GAD domain FY146_04245 PF00152 tRNA synthetases class II (D, K and N) FY146_04245 PF01336 OB-fold nucleic acid binding domain FY146_04255 PF00672 HAMP domain FY146_04255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_04260 PF00916 Sulfate permease family FY146_04260 PF01740 STAS domain FY146_04270 PF03989 DNA gyrase C-terminal domain, beta-propeller FY146_04270 PF00521 DNA gyrase/topoisomerase IV, subunit A FY146_04275 PF04376 Arginine-tRNA-protein transferase, N terminus FY146_04275 PF04377 Arginine-tRNA-protein transferase, C terminus FY146_04285 PF00490 Delta-aminolevulinic acid dehydratase FY146_04305 PF00464 Serine hydroxymethyltransferase FY146_04310 PF03477 ATP cone domain FY146_04315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY146_04315 PF01872 RibD C-terminal domain FY146_04320 PF00677 Lumazine binding domain FY146_04325 PF01810 LysE type translocator FY146_04330 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY146_04335 PF01029 NusB family FY146_04340 PF07690 Major Facilitator Superfamily FY146_04345 PF03030 Inorganic H+ pyrophosphatase FY146_04365 PF02504 Fatty acid synthesis protein FY146_04370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY146_04370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY146_04375 PF00216 Bacterial DNA-binding protein FY146_04380 PF13411 MerR HTH family regulatory protein FY146_04395 PF00403 Heavy-metal-associated domain FY146_04400 PF00970 Oxidoreductase FAD-binding domain FY146_04400 PF00111 2Fe-2S iron-sulfur cluster binding domain FY146_04400 PF00175 Oxidoreductase NAD-binding domain FY146_04405 PF00376 MerR family regulatory protein FY146_04405 PF09278 MerR, DNA binding FY146_04410 PF00528 Binding-protein-dependent transport system inner membrane component FY146_04415 PF00528 Binding-protein-dependent transport system inner membrane component FY146_04415 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_04420 PF00005 ABC transporter FY146_04420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_04425 PF00005 ABC transporter FY146_04425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_04430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_04440 PF02386 Cation transport protein FY146_04445 PF00585 C-terminal regulatory domain of Threonine dehydratase FY146_04445 PF00291 Pyridoxal-phosphate dependent enzyme FY146_04455 PF00990 Diguanylate cyclase, GGDEF domain FY146_04460 PF02525 Flavodoxin-like fold FY146_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_04465 PF03466 LysR substrate binding domain FY146_04470 PF02872 5'-nucleotidase, C-terminal domain FY146_04470 PF00149 Calcineurin-like phosphoesterase FY146_04490 PF00581 Rhodanese-like domain FY146_04495 PF02272 DHHA1 domain FY146_04495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY146_04495 PF01411 tRNA synthetases class II (A) FY146_04500 PF00291 Pyridoxal-phosphate dependent enzyme FY146_04500 PF00571 CBS domain FY146_04505 PF00875 DNA photolyase FY146_04505 PF03441 FAD binding domain of DNA photolyase FY146_04515 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY146_04515 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY146_04545 PF06055 Exopolysaccharide synthesis, ExoD FY146_04550 PF09335 SNARE associated Golgi protein FY146_04595 PF02397 Bacterial sugar transferase FY146_04600 PF00534 Glycosyl transferases group 1 FY146_04625 PF02628 Cytochrome oxidase assembly protein FY146_04630 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY146_04635 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY146_04640 PF00491 Arginase family FY146_04645 PF00380 Ribosomal protein S9/S16 FY146_04650 PF00572 Ribosomal protein L13 FY146_04660 PF13380 CoA binding domain FY146_04665 PF01053 Cys/Met metabolism PLP-dependent enzyme FY146_04690 PF00067 Cytochrome P450 FY146_04695 PF00990 Diguanylate cyclase, GGDEF domain FY146_04700 PF00574 Clp protease FY146_04705 PF07724 AAA domain (Cdc48 subfamily) FY146_04705 PF10431 C-terminal, D2-small domain, of ClpB protein FY146_04705 PF06689 ClpX C4-type zinc finger FY146_04710 PF00004 ATPase family associated with various cellular activities (AAA) FY146_04710 PF05362 Lon protease (S16) C-terminal proteolytic domain FY146_04710 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY146_04715 PF00216 Bacterial DNA-binding protein FY146_04720 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY146_04745 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY146_04750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY146_04755 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY146_04765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY146_04780 PF10531 SLBB domain FY146_04780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY146_04780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY146_04785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY146_04785 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY146_04785 PF00384 Molybdopterin oxidoreductase FY146_04790 PF00146 NADH dehydrogenase FY146_04795 PF12838 4Fe-4S dicluster domain FY146_04800 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY146_04805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY146_04810 PF00361 Proton-conducting membrane transporter FY146_04810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY146_04815 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY146_04815 PF00361 Proton-conducting membrane transporter FY146_04820 PF00361 Proton-conducting membrane transporter FY146_04825 PF08279 HTH domain FY146_04825 PF03099 Biotin/lipoate A/B protein ligase family FY146_04825 PF02237 Biotin protein ligase C terminal domain FY146_04830 PF17770 Ribonuclease J C-terminal domain FY146_04830 PF12706 Beta-lactamase superfamily domain FY146_04830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY146_04840 PF03129 Anticodon binding domain FY146_04840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY146_04845 PF02687 FtsX-like permease family FY146_04845 PF12704 MacB-like periplasmic core domain FY146_04850 PF00005 ABC transporter FY146_04855 PF02811 PHP domain FY146_04855 PF14579 Helix-hairpin-helix motif FY146_04855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY146_04855 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY146_04865 PF00817 impB/mucB/samB family FY146_04865 PF11799 impB/mucB/samB family C-terminal domain FY146_04885 PF00072 Response regulator receiver domain FY146_04890 PF00990 Diguanylate cyclase, GGDEF domain FY146_04890 PF00072 Response regulator receiver domain FY146_04895 PF00471 Ribosomal protein L33 FY146_04900 PF07690 Major Facilitator Superfamily FY146_04915 PF08206 Ribonuclease B OB domain FY146_04915 PF08461 Ribonuclease R winged-helix domain FY146_04915 PF17876 Cold shock domain FY146_04915 PF00773 RNB domain FY146_04915 PF00575 S1 RNA binding domain FY146_04920 PF01131 DNA topoisomerase FY146_04920 PF01751 Toprim domain FY146_04920 PF13368 Topoisomerase C-terminal repeat FY146_04920 PF01396 Topoisomerase DNA binding C4 zinc finger FY146_04930 PF17782 DprA winged helix domain FY146_04930 PF02481 DNA recombination-mediator protein A FY146_04935 PF02660 Glycerol-3-phosphate acyltransferase FY146_04940 PF01979 Amidohydrolase family FY146_04945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY146_04945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY146_04960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_04960 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_04960 PF18158 Adaptive response protein AidB N-terminal domain FY146_04965 PF00583 Acetyltransferase (GNAT) family FY146_04985 PF03652 Holliday junction resolvase FY146_04990 PF03831 PhnA domain FY146_04990 PF08274 PhnA Zinc-Ribbon FY146_05000 PF02686 Glu-tRNAGln amidotransferase C subunit FY146_05005 PF01425 Amidase FY146_05010 PF00583 Acetyltransferase (GNAT) family FY146_05010 PF13673 Acetyltransferase (GNAT) domain FY146_05015 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY146_05030 PF02934 GatB/GatE catalytic domain FY146_05030 PF02637 GatB domain FY146_05060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY146_05065 PF02785 Biotin carboxylase C-terminal domain FY146_05065 PF00289 Biotin carboxylase, N-terminal domain FY146_05065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_05070 PF00364 Biotin-requiring enzyme FY146_05075 PF01220 Dehydroquinase class II FY146_05085 PF00155 Aminotransferase class I and II FY146_05110 PF12111 Polyribonucleotide phosphorylase C terminal FY146_05110 PF10150 Ribonuclease E/G family FY146_05110 PF00575 S1 RNA binding domain FY146_05115 PF01520 N-acetylmuramoyl-L-alanine amidase FY146_05120 PF17092 Penicillin-binding protein OB-like domain FY146_05120 PF00912 Transglycosylase FY146_05120 PF00905 Penicillin binding protein transpeptidase domain FY146_05140 PF01513 ATP-NAD kinase FY146_05145 PF02567 Phenazine biosynthesis-like protein FY146_05150 PF00009 Elongation factor Tu GTP binding domain FY146_05150 PF03764 Elongation factor G, domain IV FY146_05150 PF00679 Elongation factor G C-terminus FY146_05165 PF00111 2Fe-2S iron-sulfur cluster binding domain FY146_05175 PF00809 Pterin binding enzyme FY146_05180 PF02152 Dihydroneopterin aldolase FY146_05185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY146_05195 PF05128 Domain of unknown function (DUF697) FY146_05200 PF04317 YcjX-like family, DUF463 FY146_05210 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY146_05225 PF00072 Response regulator receiver domain FY146_05225 PF13188 PAS domain FY146_05225 PF08448 PAS fold FY146_05225 PF00512 His Kinase A (phospho-acceptor) domain FY146_05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_05230 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY146_05235 PF00004 ATPase family associated with various cellular activities (AAA) FY146_05235 PF07724 AAA domain (Cdc48 subfamily) FY146_05235 PF17871 AAA lid domain FY146_05235 PF02861 Clp amino terminal domain, pathogenicity island component FY146_05235 PF10431 C-terminal, D2-small domain, of ClpB protein FY146_05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_05255 PF03466 LysR substrate binding domain FY146_05265 PF01230 HIT domain FY146_05290 PF00318 Ribosomal protein S2 FY146_05295 PF00889 Elongation factor TS FY146_05300 PF00696 Amino acid kinase family FY146_05305 PF01765 Ribosome recycling factor FY146_05310 PF01255 Putative undecaprenyl diphosphate synthase FY146_05320 PF17820 PDZ domain FY146_05320 PF02163 Peptidase family M50 FY146_05325 PF01103 Surface antigen FY146_05325 PF07244 Surface antigen variable number repeat FY146_05330 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_05330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY146_05335 PF07977 FabA-like domain FY146_05340 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_05340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY146_05345 PF06230 LpxI C-terminal domain FY146_05345 PF17930 LpxI N-terminal domain FY146_05350 PF02684 Lipid-A-disaccharide synthetase FY146_05355 PF07729 FCD domain FY146_05355 PF00392 Bacterial regulatory proteins, gntR family FY146_05360 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_05365 PF00528 Binding-protein-dependent transport system inner membrane component FY146_05370 PF00528 Binding-protein-dependent transport system inner membrane component FY146_05375 PF00005 ABC transporter FY146_05380 PF00285 Citrate synthase, C-terminal domain FY146_05395 PF01726 LexA DNA binding domain FY146_05395 PF00717 Peptidase S24-like FY146_05420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FY146_05420 PF00437 Type II/IV secretion system protein FY146_05425 PF00482 Type II secretion system (T2SS), protein F FY146_05445 PF07963 Prokaryotic N-terminal methylation motif FY146_05445 PF08334 Type II secretion system (T2SS), protein G FY146_05455 PF03958 Bacterial type II/III secretion system short domain FY146_05455 PF00263 Bacterial type II and III secretion system protein FY146_05480 PF00793 DAHP synthetase I family FY146_05485 PF00113 Enolase, C-terminal TIM barrel domain FY146_05485 PF03952 Enolase, N-terminal domain FY146_05495 PF00676 Dehydrogenase E1 component FY146_05500 PF00364 Biotin-requiring enzyme FY146_05500 PF02779 Transketolase, pyrimidine binding domain FY146_05500 PF02780 Transketolase, C-terminal domain FY146_05505 PF00364 Biotin-requiring enzyme FY146_05505 PF02817 e3 binding domain FY146_05505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY146_05515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY146_05515 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_05525 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY146_05525 PF04055 Radical SAM superfamily FY146_05530 PF00892 EamA-like transporter family FY146_05545 PF03364 Polyketide cyclase / dehydrase and lipid transport FY146_05550 PF02464 Competence-damaged protein FY146_05555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY146_05555 PF02542 YgbB family FY146_05560 PF01207 Dihydrouridine synthase (Dus) FY146_05565 PF00512 His Kinase A (phospho-acceptor) domain FY146_05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_05565 PF00989 PAS fold FY146_05570 PF02954 Bacterial regulatory protein, Fis family FY146_05570 PF00072 Response regulator receiver domain FY146_05570 PF00158 Sigma-54 interaction domain FY146_05575 PF00989 PAS fold FY146_05575 PF00512 His Kinase A (phospho-acceptor) domain FY146_05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_05575 PF00672 HAMP domain FY146_05580 PF00072 Response regulator receiver domain FY146_05580 PF02954 Bacterial regulatory protein, Fis family FY146_05580 PF00158 Sigma-54 interaction domain FY146_05585 PF02080 TrkA-C domain FY146_05585 PF02254 TrkA-N domain FY146_05590 PF17209 Hfq protein FY146_05595 PF16360 GTP-binding GTPase Middle Region FY146_05595 PF13167 GTP-binding GTPase N-terminal FY146_05595 PF01926 50S ribosome-binding GTPase FY146_05600 PF03819 MazG nucleotide pyrophosphohydrolase domain FY146_05610 PF10414 Sirohaem synthase dimerisation region FY146_05610 PF14824 Sirohaem biosynthesis protein central FY146_05610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_05630 PF00175 Oxidoreductase NAD-binding domain FY146_05630 PF00970 Oxidoreductase FAD-binding domain FY146_05650 PF02347 Glycine cleavage system P-protein FY146_05655 PF01597 Glycine cleavage H-protein FY146_05660 PF01571 Aminomethyltransferase folate-binding domain FY146_05660 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY146_05685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY146_05690 PF00849 RNA pseudouridylate synthase FY146_05690 PF01479 S4 domain FY146_05695 PF13419 Haloacid dehalogenase-like hydrolase FY146_05710 PF01042 Endoribonuclease L-PSP FY146_05715 PF00756 Putative esterase FY146_05725 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY146_05740 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY146_05740 PF00578 AhpC/TSA family FY146_05745 PF02798 Glutathione S-transferase, N-terminal domain FY146_05745 PF00043 Glutathione S-transferase, C-terminal domain FY146_05760 PF03358 NADPH-dependent FMN reductase FY146_05765 PF03960 ArsC family FY146_05770 PF01758 Sodium Bile acid symporter family FY146_05775 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY146_05785 PF00654 Voltage gated chloride channel FY146_05790 PF03099 Biotin/lipoate A/B protein ligase family FY146_05790 PF12706 Beta-lactamase superfamily domain FY146_05795 PF01026 TatD related DNase FY146_05800 PF08264 Anticodon-binding domain of tRNA FY146_05800 PF09334 tRNA synthetases class I (M) FY146_05805 PF09115 DNA polymerase III, delta subunit, C terminal FY146_05810 PF02223 Thymidylate kinase FY146_05815 PF07943 Penicillin-binding protein 5, C-terminal domain FY146_05815 PF00768 D-alanyl-D-alanine carboxypeptidase FY146_05820 PF03330 Lytic transglycolase FY146_05820 PF05036 Sporulation related domain FY146_05860 PF03989 DNA gyrase C-terminal domain, beta-propeller FY146_05860 PF00521 DNA gyrase/topoisomerase IV, subunit A FY146_05865 PF01914 MarC family integral membrane protein FY146_05870 PF00571 CBS domain FY146_05870 PF01743 Poly A polymerase head domain FY146_05880 PF00436 Single-strand binding protein family FY146_05885 PF17755 UvrA DNA-binding domain FY146_05885 PF17760 UvrA interaction domain FY146_05895 PF01207 Dihydrouridine synthase (Dus) FY146_05900 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY146_05905 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_05915 PF00950 ABC 3 transport family FY146_05920 PF00005 ABC transporter FY146_05925 PF01297 Zinc-uptake complex component A periplasmic FY146_05930 PF00356 Bacterial regulatory proteins, lacI family FY146_05940 PF00248 Aldo/keto reductase family FY146_05950 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY146_05950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY146_05955 PF03597 Cytochrome oxidase maturation protein cbb3-type FY146_05965 PF05751 FixH FY146_05970 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY146_05970 PF13746 4Fe-4S dicluster domain FY146_05970 PF12801 4Fe-4S binding domain FY146_05990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY146_05990 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY146_06005 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY146_06010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY146_06030 PF00376 MerR family regulatory protein FY146_06030 PF09278 MerR, DNA binding FY146_06035 PF00571 CBS domain FY146_06035 PF01769 Divalent cation transporter FY146_06035 PF03448 MgtE intracellular N domain FY146_06040 PF00384 Molybdopterin oxidoreductase FY146_06050 PF01327 Polypeptide deformylase FY146_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_06060 PF00512 His Kinase A (phospho-acceptor) domain FY146_06060 PF00989 PAS fold FY146_06070 PF03099 Biotin/lipoate A/B protein ligase family FY146_06075 PF08240 Alcohol dehydrogenase GroES-like domain FY146_06075 PF00107 Zinc-binding dehydrogenase FY146_06100 PF07549 SecD/SecF GG Motif FY146_06100 PF02355 Protein export membrane protein FY146_06105 PF02699 Preprotein translocase subunit FY146_06115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY146_06115 PF08240 Alcohol dehydrogenase GroES-like domain FY146_06120 PF08360 QacR-like protein, C-terminal region FY146_06120 PF00440 Bacterial regulatory proteins, tetR family FY146_06125 PF00067 Cytochrome P450 FY146_06135 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_06135 PF06426 Serine acetyltransferase, N-terminal FY146_06140 PF00561 alpha/beta hydrolase fold FY146_06150 PF01494 FAD binding domain FY146_06155 PF01053 Cys/Met metabolism PLP-dependent enzyme FY146_06160 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_06165 PF00528 Binding-protein-dependent transport system inner membrane component FY146_06170 PF00528 Binding-protein-dependent transport system inner membrane component FY146_06175 PF00005 ABC transporter FY146_06190 PF01368 DHH family FY146_06190 PF02272 DHHA1 domain FY146_06190 PF17768 RecJ OB domain FY146_06200 PF01842 ACT domain FY146_06200 PF00742 Homoserine dehydrogenase FY146_06200 PF03447 Homoserine dehydrogenase, NAD binding domain FY146_06205 PF00155 Aminotransferase class I and II FY146_06210 PF01156 Inosine-uridine preferring nucleoside hydrolase FY146_06215 PF01925 Sulfite exporter TauE/SafE FY146_06230 PF08240 Alcohol dehydrogenase GroES-like domain FY146_06230 PF00107 Zinc-binding dehydrogenase FY146_06235 PF00109 Beta-ketoacyl synthase, N-terminal domain FY146_06235 PF02801 Beta-ketoacyl synthase, C-terminal domain FY146_06245 PF07977 FabA-like domain FY146_06250 PF00550 Phosphopantetheine attachment site FY146_06255 PF04055 Radical SAM superfamily FY146_06260 PF00027 Cyclic nucleotide-binding domain FY146_06260 PF13545 Crp-like helix-turn-helix domain FY146_06270 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY146_06275 PF03749 Sugar fermentation stimulation protein RE domain FY146_06275 PF17746 SfsA N-terminal OB domain FY146_06280 PF00557 Metallopeptidase family M24 FY146_06285 PF04002 RadC-like JAB domain FY146_06300 PF01474 Class-II DAHP synthetase family FY146_06315 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_06315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY146_06325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY146_06330 PF13419 Haloacid dehalogenase-like hydrolase FY146_06340 PF10415 Fumarase C C-terminus FY146_06340 PF00206 Lyase FY146_06350 PF00117 Glutamine amidotransferase class-I FY146_06350 PF06418 CTP synthase N-terminus FY146_06355 PF03840 Preprotein translocase SecG subunit FY146_06360 PF00121 Triosephosphate isomerase FY146_06370 PF01751 Toprim domain FY146_06370 PF00204 DNA gyrase B FY146_06370 PF00986 DNA gyrase B subunit, carboxyl terminus FY146_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_06375 PF01370 NAD dependent epimerase/dehydratase family FY146_06380 PF00574 Clp protease FY146_06390 PF01022 Bacterial regulatory protein, arsR family FY146_06395 PF13091 PLD-like domain FY146_06400 PF00072 Response regulator receiver domain FY146_06405 PF01571 Aminomethyltransferase folate-binding domain FY146_06405 PF16350 FAD dependent oxidoreductase central domain FY146_06405 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY146_06405 PF01266 FAD dependent oxidoreductase FY146_06415 PF00924 Mechanosensitive ion channel FY146_06415 PF12795 Mechanosensitive ion channel porin domain FY146_06415 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY146_06480 PF00005 ABC transporter FY146_06485 PF02405 Permease MlaE FY146_06490 PF13378 Enolase C-terminal domain-like FY146_06490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_06500 PF01515 Phosphate acetyl/butaryl transferase FY146_06500 PF03949 Malic enzyme, NAD binding domain FY146_06500 PF00390 Malic enzyme, N-terminal domain FY146_06510 PF00881 Nitroreductase family FY146_06515 PF07676 WD40-like Beta Propeller Repeat FY146_06525 PF00795 Carbon-nitrogen hydrolase FY146_06525 PF02540 NAD synthase FY146_06530 PF00884 Sulfatase FY146_06540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY146_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_06555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY146_06555 PF05697 Bacterial trigger factor protein (TF) FY146_06555 PF05698 Bacterial trigger factor protein (TF) C-terminus FY146_06575 PF01134 Glucose inhibited division protein A FY146_06595 PF00107 Zinc-binding dehydrogenase FY146_06595 PF08240 Alcohol dehydrogenase GroES-like domain FY146_06605 PF00550 Phosphopantetheine attachment site FY146_06610 PF00501 AMP-binding enzyme FY146_06610 PF13193 AMP-binding enzyme C-terminal domain FY146_06620 PF00117 Glutamine amidotransferase class-I FY146_06620 PF00425 chorismate binding enzyme FY146_06620 PF04715 Anthranilate synthase component I, N terminal region FY146_06625 PF01702 Queuine tRNA-ribosyltransferase FY146_06630 PF02547 Queuosine biosynthesis protein FY146_06635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY146_06640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY146_06645 PF01467 Cytidylyltransferase-like FY146_06660 PF02885 Glycosyl transferase family, helical bundle domain FY146_06660 PF00591 Glycosyl transferase family, a/b domain FY146_06665 PF00218 Indole-3-glycerol phosphate synthase FY146_06670 PF01967 MoaC family FY146_06675 PF00994 Probable molybdopterin binding domain FY146_06675 PF03454 MoeA C-terminal region (domain IV) FY146_06675 PF03453 MoeA N-terminal region (domain I and II) FY146_06680 PF17158 Membrane-associated sensor, integral membrane domain FY146_06680 PF00990 Diguanylate cyclase, GGDEF domain FY146_06690 PF00999 Sodium/hydrogen exchanger family FY146_06690 PF02254 TrkA-N domain FY146_06700 PF06463 Molybdenum Cofactor Synthesis C FY146_06700 PF04055 Radical SAM superfamily FY146_06710 PF07690 Major Facilitator Superfamily FY146_06715 PF12804 MobA-like NTP transferase domain FY146_06720 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY146_06725 PF01551 Peptidase family M23 FY146_06735 PF01975 Survival protein SurE FY146_06740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY146_06740 PF02403 Seryl-tRNA synthetase N-terminal domain FY146_06745 PF00902 Sec-independent protein translocase protein (TatC) FY146_06750 PF02416 mttA/Hcf106 family FY146_06755 PF02416 mttA/Hcf106 family FY146_06760 PF04079 Segregation and condensation complex subunit ScpB FY146_06765 PF02616 Segregation and condensation protein ScpA FY146_06770 PF00933 Glycosyl hydrolase family 3 N terminal domain FY146_06780 PF03485 Arginyl tRNA synthetase N terminal domain FY146_06780 PF05746 DALR anticodon binding domain FY146_06780 PF00750 tRNA synthetases class I (R) FY146_06785 PF13286 Phosphohydrolase-associated domain FY146_06785 PF01966 HD domain FY146_06790 PF01521 Iron-sulphur cluster biosynthesis FY146_06800 PF08238 Sel1 repeat FY146_06810 PF00133 tRNA synthetases class I (I, L, M and V) FY146_06810 PF08264 Anticodon-binding domain of tRNA FY146_06810 PF10458 Valyl tRNA synthetase tRNA binding arm FY146_06960 PF00565 Staphylococcal nuclease homologue FY146_07035 PF06381 Protein of unknown function (DUF1073) FY146_07085 PF11638 DnaA N-terminal domain FY146_07085 PF08299 Bacterial dnaA protein helix-turn-helix FY146_07085 PF00308 Bacterial dnaA protein FY146_07105 PF00145 C-5 cytosine-specific DNA methylase FY146_07110 PF00772 DnaB-like helicase N terminal domain FY146_07110 PF03796 DnaB-like helicase C terminal domain FY146_07110 PF14528 LAGLIDADG-like domain FY146_07270 PF03358 NADPH-dependent FMN reductase FY146_07275 PF00994 Probable molybdopterin binding domain FY146_07275 PF02464 Competence-damaged protein FY146_07275 PF18146 Damage-inducible protein CinA KH domain FY146_07280 PF00582 Universal stress protein family FY146_07285 PF00156 Phosphoribosyl transferase domain FY146_07295 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY146_07295 PF02867 Ribonucleotide reductase, barrel domain FY146_07310 PF01566 Natural resistance-associated macrophage protein FY146_07320 PF00664 ABC transporter transmembrane region FY146_07320 PF00005 ABC transporter FY146_07325 PF01594 AI-2E family transporter FY146_07330 PF00583 Acetyltransferase (GNAT) family FY146_07360 PF03129 Anticodon binding domain FY146_07360 PF02824 TGS domain FY146_07360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY146_07360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY146_07370 PF01809 Putative membrane protein insertion efficiency factor FY146_07380 PF01227 GTP cyclohydrolase I FY146_07385 PF01502 Phosphoribosyl-AMP cyclohydrolase FY146_07390 PF01734 Patatin-like phospholipase FY146_07400 PF00478 IMP dehydrogenase / GMP reductase domain FY146_07400 PF00571 CBS domain FY146_07435 PF03313 Serine dehydratase alpha chain FY146_07435 PF03315 Serine dehydratase beta chain FY146_07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_07475 PF03466 LysR substrate binding domain FY146_07485 PF12833 Helix-turn-helix domain FY146_07485 PF01965 DJ-1/PfpI family FY146_07490 PF01256 Carbohydrate kinase FY146_07490 PF03853 YjeF-related protein N-terminus FY146_07500 PF00543 Nitrogen regulatory protein P-II FY146_07505 PF00120 Glutamine synthetase, catalytic domain FY146_07505 PF03951 Glutamine synthetase, beta-Grasp domain FY146_07515 PF08755 Hemimethylated DNA-binding protein YccV like FY146_07525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_07535 PF00892 EamA-like transporter family FY146_07545 PF17757 UvrB interaction domain FY146_07545 PF03461 TRCF domain FY146_07545 PF00270 DEAD/DEAH box helicase FY146_07545 PF00271 Helicase conserved C-terminal domain FY146_07545 PF02559 CarD-like/TRCF domain FY146_07555 PF00271 Helicase conserved C-terminal domain FY146_07555 PF00270 DEAD/DEAH box helicase FY146_07555 PF17191 RecG wedge domain FY146_07570 PF01850 PIN domain FY146_07585 PF01380 SIS domain FY146_07595 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_07595 PF14602 Hexapeptide repeat of succinyl-transferase FY146_07595 PF12804 MobA-like NTP transferase domain FY146_07600 PF07729 FCD domain FY146_07600 PF00392 Bacterial regulatory proteins, gntR family FY146_07605 PF02608 ABC transporter substrate-binding protein PnrA-like FY146_07610 PF02653 Branched-chain amino acid transport system / permease component FY146_07615 PF02653 Branched-chain amino acid transport system / permease component FY146_07620 PF00005 ABC transporter FY146_07630 PF01494 FAD binding domain FY146_07635 PF03547 Membrane transport protein FY146_07640 PF02683 Cytochrome C biogenesis protein transmembrane region FY146_07660 PF00313 'Cold-shock' DNA-binding domain FY146_07710 PF00005 ABC transporter FY146_07710 PF12704 MacB-like periplasmic core domain FY146_07710 PF02687 FtsX-like permease family FY146_07715 PF00005 ABC transporter FY146_07715 PF02687 FtsX-like permease family FY146_07715 PF12704 MacB-like periplasmic core domain FY146_07735 PF01521 Iron-sulphur cluster biosynthesis FY146_07740 PF01883 Iron-sulfur cluster assembly protein FY146_07745 PF00266 Aminotransferase class-V FY146_07750 PF01458 Uncharacterized protein family (UPF0051) FY146_07755 PF00005 ABC transporter FY146_07760 PF01458 Uncharacterized protein family (UPF0051) FY146_07765 PF00266 Aminotransferase class-V FY146_07770 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY146_07775 PF03702 Anhydro-N-acetylmuramic acid kinase FY146_07780 PF00579 tRNA synthetases class I (W and Y) FY146_07790 PF00578 AhpC/TSA family FY146_07795 PF04305 Protein of unknown function (DUF455) FY146_07800 PF01476 LysM domain FY146_07800 PF01551 Peptidase family M23 FY146_07800 PF08525 Opacity-associated protein A N-terminal motif FY146_07805 PF00270 DEAD/DEAH box helicase FY146_07805 PF00271 Helicase conserved C-terminal domain FY146_07820 PF00834 Ribulose-phosphate 3 epimerase family FY146_07830 PF10397 Adenylosuccinate lyase C-terminus FY146_07830 PF00206 Lyase FY146_07840 PF01259 SAICAR synthetase FY146_07845 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY146_07865 PF00155 Aminotransferase class I and II FY146_07865 PF00392 Bacterial regulatory proteins, gntR family FY146_07870 PF00586 AIR synthase related protein, N-terminal domain FY146_07870 PF02769 AIR synthase related protein, C-terminal domain FY146_07870 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY146_07890 PF00462 Glutaredoxin FY146_07895 PF07690 Major Facilitator Superfamily FY146_07900 PF00459 Inositol monophosphatase family FY146_07905 PF00459 Inositol monophosphatase family FY146_07910 PF01171 PP-loop family FY146_07915 PF04960 Glutaminase FY146_07920 PF01479 S4 domain FY146_07920 PF00163 Ribosomal protein S4/S9 N-terminal domain FY146_07925 PF03741 Integral membrane protein TerC family FY146_07935 PF00892 EamA-like transporter family FY146_07940 PF01810 LysE type translocator FY146_07950 PF01177 Asp/Glu/Hydantoin racemase FY146_07955 PF00588 SpoU rRNA Methylase family FY146_07965 PF00180 Isocitrate/isopropylmalate dehydrogenase FY146_07975 PF01411 tRNA synthetases class II (A) FY146_07975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY146_07975 PF02272 DHHA1 domain FY146_07980 PF00154 recA bacterial DNA recombination protein FY146_07985 PF00294 pfkB family carbohydrate kinase FY146_07990 PF04227 Indigoidine synthase A like protein FY146_07995 PF01389 OmpA-like transmembrane domain FY146_07995 PF00691 OmpA family FY146_08000 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_08005 PF00528 Binding-protein-dependent transport system inner membrane component FY146_08010 PF00528 Binding-protein-dependent transport system inner membrane component FY146_08015 PF06233 Usg-like family FY146_08020 PF08241 Methyltransferase domain FY146_08025 PF09084 NMT1/THI5 like FY146_08030 PF13404 AsnC-type helix-turn-helix domain FY146_08030 PF01037 Lrp/AsnC ligand binding domain FY146_08035 PF03167 Uracil DNA glycosylase superfamily FY146_08045 PF00989 PAS fold FY146_08045 PF00512 His Kinase A (phospho-acceptor) domain FY146_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_08050 PF01219 Prokaryotic diacylglycerol kinase FY146_08055 PF02277 Phosphoribosyltransferase FY146_08060 PF02654 Cobalamin-5-phosphate synthase FY146_08075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY146_08080 PF01061 ABC-2 type transporter FY146_08085 PF00005 ABC transporter FY146_08090 PF01925 Sulfite exporter TauE/SafE FY146_08100 PF08269 Cache domain FY146_08100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_08110 PF00004 ATPase family associated with various cellular activities (AAA) FY146_08110 PF16193 AAA C-terminal domain FY146_08110 PF12002 MgsA AAA+ ATPase C terminal FY146_08115 PF13180 PDZ domain FY146_08115 PF00595 PDZ domain FY146_08135 PF00920 Dehydratase family FY146_08140 PF00174 Oxidoreductase molybdopterin binding domain FY146_08145 PF01794 Ferric reductase like transmembrane component FY146_08155 PF05675 Protein of unknown function (DUF817) FY146_08160 PF01196 Ribosomal protein L17 FY146_08165 PF01000 RNA polymerase Rpb3/RpoA insert domain FY146_08165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY146_08165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY146_08170 PF00411 Ribosomal protein S11 FY146_08175 PF00416 Ribosomal protein S13/S18 FY146_08185 PF00344 SecY translocase FY146_08190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY146_08195 PF00327 Ribosomal protein L30p/L7e FY146_08200 PF00333 Ribosomal protein S5, N-terminal domain FY146_08200 PF03719 Ribosomal protein S5, C-terminal domain FY146_08205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY146_08210 PF00347 Ribosomal protein L6 FY146_08215 PF00410 Ribosomal protein S8 FY146_08220 PF00253 Ribosomal protein S14p/S29e FY146_08225 PF00281 Ribosomal protein L5 FY146_08225 PF00673 ribosomal L5P family C-terminus FY146_08230 PF00467 KOW motif FY146_08230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY146_08235 PF00238 Ribosomal protein L14p/L23e FY146_08240 PF00366 Ribosomal protein S17 FY146_08245 PF00831 Ribosomal L29 protein FY146_08250 PF00252 Ribosomal protein L16p/L10e FY146_08255 PF07650 KH domain FY146_08255 PF00189 Ribosomal protein S3, C-terminal domain FY146_08260 PF00237 Ribosomal protein L22p/L17e FY146_08265 PF00203 Ribosomal protein S19 FY146_08270 PF00181 Ribosomal Proteins L2, RNA binding domain FY146_08270 PF03947 Ribosomal Proteins L2, C-terminal domain FY146_08275 PF00276 Ribosomal protein L23 FY146_08280 PF00573 Ribosomal protein L4/L1 family FY146_08285 PF00297 Ribosomal protein L3 FY146_08290 PF00338 Ribosomal protein S10p/S20e FY146_08295 PF03143 Elongation factor Tu C-terminal domain FY146_08295 PF00009 Elongation factor Tu GTP binding domain FY146_08295 PF03144 Elongation factor Tu domain 2 FY146_08300 PF00679 Elongation factor G C-terminus FY146_08300 PF14492 Elongation Factor G, domain II FY146_08300 PF03764 Elongation factor G, domain IV FY146_08300 PF00009 Elongation factor Tu GTP binding domain FY146_08300 PF03144 Elongation factor Tu domain 2 FY146_08305 PF00177 Ribosomal protein S7p/S5e FY146_08310 PF00164 Ribosomal protein S12/S23 FY146_08330 PF04997 RNA polymerase Rpb1, domain 1 FY146_08330 PF00623 RNA polymerase Rpb1, domain 2 FY146_08330 PF04983 RNA polymerase Rpb1, domain 3 FY146_08330 PF05000 RNA polymerase Rpb1, domain 4 FY146_08330 PF04998 RNA polymerase Rpb1, domain 5 FY146_08335 PF04560 RNA polymerase Rpb2, domain 7 FY146_08335 PF04563 RNA polymerase beta subunit FY146_08335 PF04561 RNA polymerase Rpb2, domain 2 FY146_08335 PF04565 RNA polymerase Rpb2, domain 3 FY146_08335 PF10385 RNA polymerase beta subunit external 1 domain FY146_08335 PF00562 RNA polymerase Rpb2, domain 6 FY146_08340 PF00542 Ribosomal protein L7/L12 C-terminal domain FY146_08340 PF16320 Ribosomal protein L7/L12 dimerisation domain FY146_08345 PF00466 Ribosomal protein L10 FY146_08350 PF00687 Ribosomal protein L1p/L10e family FY146_08355 PF00298 Ribosomal protein L11, RNA binding domain FY146_08355 PF03946 Ribosomal protein L11, N-terminal domain FY146_08360 PF02357 Transcription termination factor nusG FY146_08360 PF00467 KOW motif FY146_08365 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY146_08375 PF02719 Polysaccharide biosynthesis protein FY146_08375 PF08485 Polysaccharide biosynthesis protein C-terminal FY146_08380 PF00009 Elongation factor Tu GTP binding domain FY146_08380 PF03143 Elongation factor Tu C-terminal domain FY146_08380 PF03144 Elongation factor Tu domain 2 FY146_08385 PF03741 Integral membrane protein TerC family FY146_08390 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY146_08410 PF00664 ABC transporter transmembrane region FY146_08410 PF00005 ABC transporter FY146_08450 PF04545 Sigma-70, region 4 FY146_08450 PF04542 Sigma-70 region 2 FY146_08460 PF00158 Sigma-54 interaction domain FY146_08460 PF00072 Response regulator receiver domain FY146_08460 PF02954 Bacterial regulatory protein, Fis family FY146_08465 PF00072 Response regulator receiver domain FY146_08465 PF08769 Sporulation initiation factor Spo0A C terminal FY146_08470 PF01627 Hpt domain FY146_08470 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_08470 PF00512 His Kinase A (phospho-acceptor) domain FY146_08470 PF00072 Response regulator receiver domain FY146_08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_08475 PF00072 Response regulator receiver domain FY146_08480 PF07536 HWE histidine kinase FY146_08480 PF13426 PAS domain FY146_08480 PF08447 PAS fold FY146_08485 PF00072 Response regulator receiver domain FY146_08490 PF08446 PAS fold FY146_08490 PF00512 His Kinase A (phospho-acceptor) domain FY146_08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_08490 PF01590 GAF domain FY146_08490 PF00360 Phytochrome region FY146_08505 PF00588 SpoU rRNA Methylase family FY146_08505 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY146_08510 PF03061 Thioesterase superfamily FY146_08530 PF13460 NAD(P)H-binding FY146_08535 PF01638 HxlR-like helix-turn-helix FY146_08550 PF04851 Type III restriction enzyme, res subunit FY146_08550 PF00271 Helicase conserved C-terminal domain FY146_08550 PF02151 UvrB/uvrC motif FY146_08550 PF12344 Ultra-violet resistance protein B FY146_08550 PF17757 UvrB interaction domain FY146_08560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY146_08560 PF00756 Putative esterase FY146_08580 PF00684 DnaJ central domain FY146_08580 PF01556 DnaJ C terminal domain FY146_08580 PF00226 DnaJ domain FY146_08600 PF17151 Periplasmic sensor domain FY146_08600 PF00990 Diguanylate cyclase, GGDEF domain FY146_08610 PF08402 TOBE domain FY146_08610 PF00005 ABC transporter FY146_08620 PF01547 Bacterial extracellular solute-binding protein FY146_08625 PF00155 Aminotransferase class I and II FY146_08630 PF05025 RbsD / FucU transport protein family FY146_08640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY146_08640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY146_08645 PF00440 Bacterial regulatory proteins, tetR family FY146_08650 PF12833 Helix-turn-helix domain FY146_08650 PF06719 AraC-type transcriptional regulator N-terminus FY146_08655 PF00107 Zinc-binding dehydrogenase FY146_08655 PF08240 Alcohol dehydrogenase GroES-like domain FY146_08660 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_08665 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY146_08670 PF03472 Autoinducer binding domain FY146_08670 PF00196 Bacterial regulatory proteins, luxR family FY146_08675 PF14490 Helix-hairpin-helix containing domain FY146_08675 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY146_08675 PF13538 UvrD-like helicase C-terminal domain FY146_08695 PF04542 Sigma-70 region 2 FY146_08695 PF08281 Sigma-70, region 4 FY146_08710 PF00248 Aldo/keto reductase family FY146_08725 PF10369 Small subunit of acetolactate synthase FY146_08730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY146_08730 PF00205 Thiamine pyrophosphate enzyme, central domain FY146_08730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY146_08750 PF13302 Acetyltransferase (GNAT) domain FY146_08760 PF13180 PDZ domain FY146_08765 PF01145 SPFH domain / Band 7 family FY146_08770 PF01145 SPFH domain / Band 7 family FY146_08775 PF00186 Dihydrofolate reductase FY146_08780 PF00303 Thymidylate synthase FY146_08815 PF01565 FAD binding domain FY146_08815 PF02913 FAD linked oxidases, C-terminal domain FY146_08820 PF00873 AcrB/AcrD/AcrF family FY146_08825 PF13533 Biotin-lipoyl like FY146_08835 PF13361 UvrD-like helicase C-terminal domain FY146_08835 PF00580 UvrD/REP helicase N-terminal domain FY146_08860 PF00857 Isochorismatase family FY146_08880 PF01321 Creatinase/Prolidase N-terminal domain FY146_08880 PF00557 Metallopeptidase family M24 FY146_08890 PF02630 SCO1/SenC FY146_08900 PF01584 CheW-like domain FY146_08910 PF00929 Exonuclease FY146_08915 PF03466 LysR substrate binding domain FY146_08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_08925 PF00583 Acetyltransferase (GNAT) family FY146_08930 PF01636 Phosphotransferase enzyme family FY146_08935 PF01653 NAD-dependent DNA ligase adenylation domain FY146_08935 PF03120 NAD-dependent DNA ligase OB-fold domain FY146_08935 PF00533 BRCA1 C Terminus (BRCT) domain FY146_08935 PF12826 Helix-hairpin-helix motif FY146_08935 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY146_08940 PF02463 RecF/RecN/SMC N terminal domain FY146_08945 PF13525 Outer membrane lipoprotein FY146_08950 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY146_08955 PF12327 FtsZ family, C-terminal domain FY146_08955 PF00091 Tubulin/FtsZ family, GTPase domain FY146_08960 PF02491 SHS2 domain inserted in FTSA FY146_08965 PF08478 POTRA domain, FtsQ-type FY146_08965 PF03799 Cell division protein FtsQ FY146_08970 PF01820 D-ala D-ala ligase N-terminus FY146_08970 PF07478 D-ala D-ala ligase C-terminus FY146_08975 PF00083 Sugar (and other) transporter FY146_08975 PF07690 Major Facilitator Superfamily FY146_08980 PF00990 Diguanylate cyclase, GGDEF domain FY146_08980 PF00563 EAL domain FY146_08985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY146_08985 PF01565 FAD binding domain FY146_08990 PF01225 Mur ligase family, catalytic domain FY146_08990 PF08245 Mur ligase middle domain FY146_08990 PF02875 Mur ligase family, glutamate ligase domain FY146_08995 PF04101 Glycosyltransferase family 28 C-terminal domain FY146_08995 PF03033 Glycosyltransferase family 28 N-terminal domain FY146_09000 PF01098 Cell cycle protein FY146_09005 PF08245 Mur ligase middle domain FY146_09005 PF02875 Mur ligase family, glutamate ligase domain FY146_09010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY146_09010 PF00953 Glycosyl transferase family 4 FY146_09015 PF08245 Mur ligase middle domain FY146_09015 PF01225 Mur ligase family, catalytic domain FY146_09015 PF02875 Mur ligase family, glutamate ligase domain FY146_09020 PF02875 Mur ligase family, glutamate ligase domain FY146_09020 PF08245 Mur ligase middle domain FY146_09020 PF01225 Mur ligase family, catalytic domain FY146_09025 PF00905 Penicillin binding protein transpeptidase domain FY146_09025 PF03717 Penicillin-binding Protein dimerisation domain FY146_09035 PF01795 MraW methylase family FY146_09040 PF02381 MraZ protein, putative antitoxin-like FY146_09065 PF01510 N-acetylmuramoyl-L-alanine amidase FY146_09070 PF05099 Tellurite resistance protein TerB FY146_09070 PF00226 DnaJ domain FY146_09075 PF00365 Phosphofructokinase FY146_09095 PF13649 Methyltransferase domain FY146_09100 PF01183 Glycosyl hydrolases family 25 FY146_09110 PF02219 Methylenetetrahydrofolate reductase FY146_09115 PF01209 ubiE/COQ5 methyltransferase family FY146_09120 PF00005 ABC transporter FY146_09120 PF12848 ABC transporter FY146_09125 PF12146 Serine aminopeptidase, S33 FY146_09130 PF02515 CoA-transferase family III FY146_09135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY146_09135 PF00205 Thiamine pyrophosphate enzyme, central domain FY146_09135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY146_09145 PF01042 Endoribonuclease L-PSP FY146_09160 PF03734 L,D-transpeptidase catalytic domain FY146_09160 PF01476 LysM domain FY146_09165 PF07690 Major Facilitator Superfamily FY146_09185 PF10609 NUBPL iron-transfer P-loop NTPase FY146_09190 PF00465 Iron-containing alcohol dehydrogenase FY146_09195 PF00171 Aldehyde dehydrogenase family FY146_09200 PF00120 Glutamine synthetase, catalytic domain FY146_09200 PF03951 Glutamine synthetase, beta-Grasp domain FY146_09205 PF13520 Amino acid permease FY146_09215 PF01418 Helix-turn-helix domain, rpiR family FY146_09215 PF01380 SIS domain FY146_09220 PF13416 Bacterial extracellular solute-binding protein FY146_09235 PF00005 ABC transporter FY146_09235 PF08402 TOBE domain FY146_09240 PF08240 Alcohol dehydrogenase GroES-like domain FY146_09240 PF00107 Zinc-binding dehydrogenase FY146_09255 PF07690 Major Facilitator Superfamily FY146_09260 PF00809 Pterin binding enzyme FY146_09260 PF02310 B12 binding domain FY146_09260 PF02607 B12 binding domain FY146_09260 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY146_09260 PF02574 Homocysteine S-methyltransferase FY146_09280 PF13505 Outer membrane protein beta-barrel domain FY146_09295 PF04402 Protein of unknown function (DUF541) FY146_09305 PF01894 Uncharacterised protein family UPF0047 FY146_09310 PF08446 PAS fold FY146_09310 PF01590 GAF domain FY146_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_09310 PF00512 His Kinase A (phospho-acceptor) domain FY146_09310 PF00360 Phytochrome region FY146_09320 PF04545 Sigma-70, region 4 FY146_09320 PF04542 Sigma-70 region 2 FY146_09320 PF00140 Sigma-70 factor, region 1.2 FY146_09320 PF04539 Sigma-70 region 3 FY146_09320 PF04546 Sigma-70, non-essential region FY146_09320 PF03979 Sigma-70 factor, region 1.1 FY146_09325 PF01807 CHC2 zinc finger FY146_09325 PF10410 DnaB-helicase binding domain of primase FY146_09325 PF08278 DNA primase DnaG DnaB-binding FY146_09325 PF08275 DNA primase catalytic core, N-terminal domain FY146_09345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY146_09345 PF00117 Glutamine amidotransferase class-I FY146_09350 PF01554 MatE FY146_09355 PF02743 Cache domain FY146_09355 PF00672 HAMP domain FY146_09355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_09365 PF04228 Putative neutral zinc metallopeptidase FY146_09380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_09380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY146_09380 PF02142 MGS-like domain FY146_09390 PF07694 5TMR of 5TMR-LYT FY146_09390 PF00990 Diguanylate cyclase, GGDEF domain FY146_09405 PF01272 Transcription elongation factor, GreA/GreB, C-term FY146_09405 PF03449 Transcription elongation factor, N-terminal FY146_09410 PF00534 Glycosyl transferases group 1 FY146_09415 PF01037 Lrp/AsnC ligand binding domain FY146_09420 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_09425 PF03466 LysR substrate binding domain FY146_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_09435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY146_09450 PF03466 LysR substrate binding domain FY146_09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_09460 PF01699 Sodium/calcium exchanger protein FY146_09465 PF00155 Aminotransferase class I and II FY146_09470 PF05231 MASE1 FY146_09470 PF00563 EAL domain FY146_09485 PF00313 'Cold-shock' DNA-binding domain FY146_09490 PF00753 Metallo-beta-lactamase superfamily FY146_09500 PF12802 MarR family FY146_09505 PF00072 Response regulator receiver domain FY146_09505 PF00486 Transcriptional regulatory protein, C terminal FY146_09510 PF00672 HAMP domain FY146_09510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_09510 PF00512 His Kinase A (phospho-acceptor) domain FY146_09515 PF01588 Putative tRNA binding domain FY146_09520 PF03807 NADP oxidoreductase coenzyme F420-dependent FY146_09520 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY146_09535 PF01790 Prolipoprotein diacylglyceryl transferase FY146_09545 PF02578 Multi-copper polyphenol oxidoreductase laccase FY146_09560 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY146_09560 PF14572 Phosphoribosyl synthetase-associated domain FY146_09570 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY146_09580 PF00535 Glycosyl transferase family 2 FY146_09585 PF00672 HAMP domain FY146_09585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_09590 PF00171 Aldehyde dehydrogenase family FY146_09595 PF02954 Bacterial regulatory protein, Fis family FY146_09600 PF03707 Bacterial signalling protein N terminal repeat FY146_09600 PF00990 Diguanylate cyclase, GGDEF domain FY146_09600 PF13188 PAS domain FY146_09600 PF00563 EAL domain FY146_09605 PF01386 Ribosomal L25p family FY146_09605 PF14693 Ribosomal protein TL5, C-terminal domain FY146_09610 PF08448 PAS fold FY146_09610 PF08447 PAS fold FY146_09610 PF00990 Diguanylate cyclase, GGDEF domain FY146_09610 PF00563 EAL domain FY146_09620 PF01195 Peptidyl-tRNA hydrolase FY146_09630 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY146_09635 PF06071 Protein of unknown function (DUF933) FY146_09635 PF01926 50S ribosome-binding GTPase FY146_09655 PF00156 Phosphoribosyl transferase domain FY146_09665 PF02167 Cytochrome C1 family FY146_09665 PF00032 Cytochrome b(C-terminal)/b6/petD FY146_09665 PF00033 Cytochrome b/b6/petB FY146_09670 PF00033 Cytochrome b/b6/petB FY146_09670 PF00032 Cytochrome b(C-terminal)/b6/petD FY146_09675 PF00355 Rieske [2Fe-2S] domain FY146_09675 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY146_09685 PF00664 ABC transporter transmembrane region FY146_09685 PF00005 ABC transporter FY146_09695 PF00005 ABC transporter FY146_09695 PF00664 ABC transporter transmembrane region FY146_09705 PF00588 SpoU rRNA Methylase family FY146_09710 PF02690 Na+/Pi-cotransporter FY146_09720 PF01218 Coproporphyrinogen III oxidase FY146_09735 PF01743 Poly A polymerase head domain FY146_09735 PF12627 Probable RNA and SrmB- binding site of polymerase A FY146_09735 PF13735 tRNA nucleotidyltransferase domain 2 putative FY146_09740 PF00293 NUDIX domain FY146_09750 PF07726 ATPase family associated with various cellular activities (AAA) FY146_09750 PF17863 AAA lid domain FY146_09770 PF00583 Acetyltransferase (GNAT) family FY146_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_09775 PF03466 LysR substrate binding domain FY146_09785 PF07690 Major Facilitator Superfamily FY146_09795 PF13409 Glutathione S-transferase, N-terminal domain FY146_09800 PF00293 NUDIX domain FY146_09810 PF00682 HMGL-like FY146_09810 PF08502 LeuA allosteric (dimerisation) domain FY146_09815 PF03594 Benzoate membrane transport protein FY146_09830 PF04545 Sigma-70, region 4 FY146_09830 PF04542 Sigma-70 region 2 FY146_09840 PF00574 Clp protease FY146_09845 PF04955 HupE / UreJ protein FY146_09855 PF14489 QueF-like protein FY146_09860 PF16916 Dimerisation domain of Zinc Transporter FY146_09860 PF01545 Cation efflux family FY146_09870 PF13458 Periplasmic binding protein FY146_09880 PF01022 Bacterial regulatory protein, arsR family FY146_09885 PF00005 ABC transporter FY146_09885 PF00571 CBS domain FY146_09890 PF00528 Binding-protein-dependent transport system inner membrane component FY146_09895 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY146_09905 PF00265 Thymidine kinase FY146_09910 PF00127 Copper binding proteins, plastocyanin/azurin family FY146_09920 PF00196 Bacterial regulatory proteins, luxR family FY146_09920 PF03472 Autoinducer binding domain FY146_09925 PF03350 Uncharacterized protein family, UPF0114 FY146_09930 PF00593 TonB dependent receptor FY146_09930 PF04886 PT repeat FY146_09930 PF07715 TonB-dependent Receptor Plug Domain FY146_09940 PF04715 Anthranilate synthase component I, N terminal region FY146_09940 PF00425 chorismate binding enzyme FY146_09940 PF00117 Glutamine amidotransferase class-I FY146_09950 PF01966 HD domain FY146_09950 PF11871 Domain of unknown function (DUF3391) FY146_09955 PF01979 Amidohydrolase family FY146_09955 PF13382 Adenine deaminase C-terminal domain FY146_09960 PF00583 Acetyltransferase (GNAT) family FY146_09965 PF00128 Alpha amylase, catalytic domain FY146_09970 PF00294 pfkB family carbohydrate kinase FY146_09990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY146_09990 PF01926 50S ribosome-binding GTPase FY146_10010 PF05992 SbmA/BacA-like family FY146_10020 PF00557 Metallopeptidase family M24 FY146_10035 PF00111 2Fe-2S iron-sulfur cluster binding domain FY146_10035 PF01799 [2Fe-2S] binding domain FY146_10040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY146_10040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY146_10050 PF03466 LysR substrate binding domain FY146_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10065 PF01979 Amidohydrolase family FY146_10075 PF01070 FMN-dependent dehydrogenase FY146_10080 PF00893 Small Multidrug Resistance protein FY146_10085 PF17932 Tetracyclin repressor-like, C-terminal domain FY146_10085 PF00440 Bacterial regulatory proteins, tetR family FY146_10090 PF00768 D-alanyl-D-alanine carboxypeptidase FY146_10090 PF07943 Penicillin-binding protein 5, C-terminal domain FY146_10100 PF00576 HIUase/Transthyretin family FY146_10105 PF04115 Ureidoglycolate lyase FY146_10120 PF01014 Uricase FY146_10120 PF09349 OHCU decarboxylase FY146_10130 PF06299 Protein of unknown function (DUF1045) FY146_10135 PF01266 FAD dependent oxidoreductase FY146_10140 PF01266 FAD dependent oxidoreductase FY146_10140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY146_10145 PF00672 HAMP domain FY146_10145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY146_10145 PF00072 Response regulator receiver domain FY146_10145 PF01627 Hpt domain FY146_10145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_10145 PF00512 His Kinase A (phospho-acceptor) domain FY146_10150 PF00270 DEAD/DEAH box helicase FY146_10150 PF00271 Helicase conserved C-terminal domain FY146_10160 PF07681 DoxX FY146_10165 PF01476 LysM domain FY146_10165 PF03734 L,D-transpeptidase catalytic domain FY146_10175 PF14403 Circularly permuted ATP-grasp type 2 FY146_10185 PF08379 Bacterial transglutaminase-like N-terminal region FY146_10185 PF01841 Transglutaminase-like superfamily FY146_10210 PF02653 Branched-chain amino acid transport system / permease component FY146_10215 PF00005 ABC transporter FY146_10220 PF13407 Periplasmic binding protein domain FY146_10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10225 PF03466 LysR substrate binding domain FY146_10275 PF03743 Bacterial conjugation TrbI-like protein FY146_10285 PF04335 VirB8 protein FY146_10290 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY146_10305 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY146_10320 PF00437 Type II/IV secretion system protein FY146_10330 PF02534 Type IV secretory system Conjugative DNA transfer FY146_10340 PF01381 Helix-turn-helix FY146_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10345 PF03466 LysR substrate binding domain FY146_10350 PF02321 Outer membrane efflux protein FY146_10355 PF13533 Biotin-lipoyl like FY146_10370 PF12833 Helix-turn-helix domain FY146_10370 PF02311 AraC-like ligand binding domain FY146_10385 PF03466 LysR substrate binding domain FY146_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10395 PF00753 Metallo-beta-lactamase superfamily FY146_10395 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY146_10395 PF10996 Beta-Casp domain FY146_10410 PF03466 LysR substrate binding domain FY146_10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10420 PF01464 Transglycosylase SLT domain FY146_10445 PF13614 AAA domain FY146_10465 PF06067 Domain of unknown function (DUF932) FY146_10480 PF07690 Major Facilitator Superfamily FY146_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10485 PF03466 LysR substrate binding domain FY146_10490 PF05284 Protein of unknown function (DUF736) FY146_10505 PF02463 RecF/RecN/SMC N terminal domain FY146_10535 PF00271 Helicase conserved C-terminal domain FY146_10550 PF09382 RQC domain FY146_10550 PF00270 DEAD/DEAH box helicase FY146_10550 PF00271 Helicase conserved C-terminal domain FY146_10550 PF00570 HRDC domain FY146_10550 PF16124 RecQ zinc-binding FY146_10555 PF02661 Fic/DOC family FY146_10555 PF13784 Fic/DOC family N-terminal FY146_10570 PF03358 NADPH-dependent FMN reductase FY146_10575 PF00561 alpha/beta hydrolase fold FY146_10595 PF13533 Biotin-lipoyl like FY146_10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10600 PF03466 LysR substrate binding domain FY146_10605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY146_10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10610 PF03466 LysR substrate binding domain FY146_10625 PF00857 Isochorismatase family FY146_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_10630 PF03466 LysR substrate binding domain FY146_10635 PF17862 AAA+ lid domain FY146_10635 PF01434 Peptidase family M41 FY146_10635 PF00004 ATPase family associated with various cellular activities (AAA) FY146_10645 PF00665 Integrase core domain FY146_10650 PF01695 IstB-like ATP binding protein FY146_10660 PF00672 HAMP domain FY146_10660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_10665 PF07690 Major Facilitator Superfamily FY146_10675 PF02574 Homocysteine S-methyltransferase FY146_10675 PF00809 Pterin binding enzyme FY146_10675 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY146_10675 PF02607 B12 binding domain FY146_10675 PF02310 B12 binding domain FY146_10680 PF00528 Binding-protein-dependent transport system inner membrane component FY146_10685 PF00528 Binding-protein-dependent transport system inner membrane component FY146_10690 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_10695 PF00005 ABC transporter FY146_10715 PF00331 Glycosyl hydrolase family 10 FY146_10720 PF00535 Glycosyl transferase family 2 FY146_10735 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY146_10750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY146_10750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY146_10750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY146_10750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY146_10765 PF01152 Bacterial-like globin FY146_10785 PF00440 Bacterial regulatory proteins, tetR family FY146_10785 PF08362 YcdC-like protein, C-terminal region FY146_10790 PF01546 Peptidase family M20/M25/M40 FY146_10790 PF07687 Peptidase dimerisation domain FY146_10795 PF01979 Amidohydrolase family FY146_10800 PF00293 NUDIX domain FY146_10805 PF00005 ABC transporter FY146_10810 PF00528 Binding-protein-dependent transport system inner membrane component FY146_10815 PF00528 Binding-protein-dependent transport system inner membrane component FY146_10830 PF00873 AcrB/AcrD/AcrF family FY146_10845 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY146_10850 PF01730 UreF FY146_10855 PF02814 UreE urease accessory protein, N-terminal domain FY146_10855 PF05194 UreE urease accessory protein, C-terminal domain FY146_10860 PF08534 Redoxin FY146_10870 PF01979 Amidohydrolase family FY146_10870 PF00449 Urease alpha-subunit, N-terminal domain FY146_10880 PF07007 Lysozyme inhibitor LprI FY146_10890 PF00699 Urease beta subunit FY146_10895 PF06906 Protein of unknown function (DUF1272) FY146_10900 PF00547 Urease, gamma subunit FY146_10905 PF01774 UreD urease accessory protein FY146_10915 PF00005 ABC transporter FY146_10925 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_10925 PF00005 ABC transporter FY146_10935 PF02653 Branched-chain amino acid transport system / permease component FY146_10945 PF10931 Protein of unknown function (DUF2735) FY146_10950 PF03951 Glutamine synthetase, beta-Grasp domain FY146_10950 PF00120 Glutamine synthetase, catalytic domain FY146_10960 PF01627 Hpt domain FY146_10960 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY146_10960 PF00512 His Kinase A (phospho-acceptor) domain FY146_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_10960 PF00072 Response regulator receiver domain FY146_10960 PF00989 PAS fold FY146_10965 PF00072 Response regulator receiver domain FY146_10975 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY146_10975 PF01522 Polysaccharide deacetylase FY146_10980 PF13458 Periplasmic binding protein FY146_10990 PF00005 ABC transporter FY146_10995 PF00005 ABC transporter FY146_10995 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_11000 PF11862 Domain of unknown function (DUF3382) FY146_11000 PF02653 Branched-chain amino acid transport system / permease component FY146_11005 PF02653 Branched-chain amino acid transport system / permease component FY146_11010 PF00459 Inositol monophosphatase family FY146_11040 PF00072 Response regulator receiver domain FY146_11040 PF00486 Transcriptional regulatory protein, C terminal FY146_11060 PF10090 Histidine phosphotransferase C-terminal domain FY146_11075 PF00588 SpoU rRNA Methylase family FY146_11085 PF00849 RNA pseudouridylate synthase FY146_11095 PF00140 Sigma-70 factor, region 1.2 FY146_11095 PF04542 Sigma-70 region 2 FY146_11095 PF04545 Sigma-70, region 4 FY146_11105 PF00709 Adenylosuccinate synthetase FY146_11130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_11140 PF03167 Uracil DNA glycosylase superfamily FY146_11145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_11150 PF04304 Protein of unknown function (DUF454) FY146_11155 PF00005 ABC transporter FY146_11160 PF01032 FecCD transport family FY146_11165 PF01497 Periplasmic binding protein FY146_11175 PF06228 Haem utilisation ChuX/HutX FY146_11190 PF13443 Cro/C1-type HTH DNA-binding domain FY146_11200 PF00551 Formyl transferase FY146_11215 PF00512 His Kinase A (phospho-acceptor) domain FY146_11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_11215 PF00672 HAMP domain FY146_11220 PF00486 Transcriptional regulatory protein, C terminal FY146_11220 PF00072 Response regulator receiver domain FY146_11230 PF03401 Tripartite tricarboxylate transporter family receptor FY146_11240 PF01970 Tripartite tricarboxylate transporter TctA family FY146_11255 PF01032 FecCD transport family FY146_11260 PF01032 FecCD transport family FY146_11265 PF00005 ABC transporter FY146_11270 PF00210 Ferritin-like domain FY146_11285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_11285 PF00672 HAMP domain FY146_11290 PF00248 Aldo/keto reductase family FY146_11295 PF07690 Major Facilitator Superfamily FY146_11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_11300 PF03466 LysR substrate binding domain FY146_11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_11305 PF03466 LysR substrate binding domain FY146_11310 PF07859 alpha/beta hydrolase fold FY146_11315 PF13533 Biotin-lipoyl like FY146_11320 PF00873 AcrB/AcrD/AcrF family FY146_11335 PF13091 PLD-like domain FY146_11335 PF13396 Phospholipase_D-nuclease N-terminal FY146_11340 PF08543 Phosphomethylpyrimidine kinase FY146_11345 PF00484 Carbonic anhydrase FY146_11355 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY146_11355 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY146_11365 PF00083 Sugar (and other) transporter FY146_11370 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY146_11370 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY146_11370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY146_11375 PF02233 NAD(P) transhydrogenase beta subunit FY146_11380 PF01613 Flavin reductase like domain FY146_11385 PF00881 Nitroreductase family FY146_11390 PF00561 alpha/beta hydrolase fold FY146_11395 PF01042 Endoribonuclease L-PSP FY146_11400 PF00857 Isochorismatase family FY146_11405 PF00296 Luciferase-like monooxygenase FY146_11410 PF01126 Heme oxygenase FY146_11415 PF00701 Dihydrodipicolinate synthetase family FY146_11420 PF00392 Bacterial regulatory proteins, gntR family FY146_11420 PF07729 FCD domain FY146_11430 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11435 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11440 PF17912 MalK OB fold domain FY146_11440 PF03459 TOBE domain FY146_11440 PF00005 ABC transporter FY146_11445 PF00294 pfkB family carbohydrate kinase FY146_11450 PF03576 Peptidase family S58 FY146_11455 PF01063 Amino-transferase class IV FY146_11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_11460 PF03466 LysR substrate binding domain FY146_11465 PF00144 Beta-lactamase FY146_11470 PF00005 ABC transporter FY146_11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_11475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_11475 PF00005 ABC transporter FY146_11480 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_11480 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11485 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_11495 PF01244 Membrane dipeptidase (Peptidase family M19) FY146_11505 PF03706 Lysylphosphatidylglycerol synthase TM region FY146_11505 PF09924 Uncharacterised conserved protein (DUF2156) FY146_11520 PF07690 Major Facilitator Superfamily FY146_11530 PF04444 Catechol dioxygenase N terminus FY146_11530 PF00775 Dioxygenase FY146_11535 PF00465 Iron-containing alcohol dehydrogenase FY146_11540 PF04909 Amidohydrolase FY146_11545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_11545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY146_11550 PF01613 Flavin reductase like domain FY146_11570 PF00512 His Kinase A (phospho-acceptor) domain FY146_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_11575 PF00486 Transcriptional regulatory protein, C terminal FY146_11575 PF00072 Response regulator receiver domain FY146_11585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY146_11590 PF00005 ABC transporter FY146_11590 PF08402 TOBE domain FY146_11595 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11610 PF00486 Transcriptional regulatory protein, C terminal FY146_11610 PF00072 Response regulator receiver domain FY146_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_11615 PF00512 His Kinase A (phospho-acceptor) domain FY146_11615 PF08448 PAS fold FY146_11615 PF13188 PAS domain FY146_11615 PF00072 Response regulator receiver domain FY146_11620 PF00202 Aminotransferase class-III FY146_11625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_11625 PF03466 LysR substrate binding domain FY146_11630 PF00313 'Cold-shock' DNA-binding domain FY146_11665 PF01259 SAICAR synthetase FY146_11670 PF00440 Bacterial regulatory proteins, tetR family FY146_11675 PF00529 HlyD membrane-fusion protein of T1SS FY146_11675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_11680 PF00873 AcrB/AcrD/AcrF family FY146_11685 PF02321 Outer membrane efflux protein FY146_11690 PF01132 Elongation factor P (EF-P) OB domain FY146_11690 PF08207 Elongation factor P (EF-P) KOW-like domain FY146_11690 PF09285 Elongation factor P, C-terminal FY146_11695 PF00152 tRNA synthetases class II (D, K and N) FY146_11700 PF12544 Lysine-2,3-aminomutase FY146_11700 PF04055 Radical SAM superfamily FY146_11715 PF03466 LysR substrate binding domain FY146_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_11720 PF01266 FAD dependent oxidoreductase FY146_11730 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11735 PF00005 ABC transporter FY146_11735 PF03459 TOBE domain FY146_11745 PF03576 Peptidase family S58 FY146_11750 PF05690 Thiazole biosynthesis protein ThiG FY146_11760 PF01266 FAD dependent oxidoreductase FY146_11765 PF13667 ThiC-associated domain FY146_11765 PF01964 Radical SAM ThiC family FY146_11775 PF00550 Phosphopantetheine attachment site FY146_11805 PF00005 ABC transporter FY146_11805 PF00664 ABC transporter transmembrane region FY146_11810 PF13545 Crp-like helix-turn-helix domain FY146_11810 PF00027 Cyclic nucleotide-binding domain FY146_11820 PF00672 HAMP domain FY146_11820 PF00211 Adenylate and Guanylate cyclase catalytic domain FY146_11830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY146_11830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY146_11830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY146_11835 PF00534 Glycosyl transferases group 1 FY146_11835 PF13439 Glycosyltransferase Family 4 FY146_11850 PF00005 ABC transporter FY146_11850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_11855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_11860 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11865 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_11865 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11880 PF03033 Glycosyltransferase family 28 N-terminal domain FY146_11880 PF04101 Glycosyltransferase family 28 C-terminal domain FY146_11885 PF03932 CutC family FY146_11890 PF07690 Major Facilitator Superfamily FY146_11900 PF00728 Glycosyl hydrolase family 20, catalytic domain FY146_11900 PF02838 Glycosyl hydrolase family 20, domain 2 FY146_11910 PF01418 Helix-turn-helix domain, rpiR family FY146_11910 PF01380 SIS domain FY146_11920 PF00005 ABC transporter FY146_11920 PF17912 MalK OB fold domain FY146_11925 PF01547 Bacterial extracellular solute-binding protein FY146_11930 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11935 PF00528 Binding-protein-dependent transport system inner membrane component FY146_11950 PF07702 UTRA domain FY146_11950 PF00392 Bacterial regulatory proteins, gntR family FY146_11955 PF01380 SIS domain FY146_11960 PF01979 Amidohydrolase family FY146_11965 PF00480 ROK family FY146_11970 PF01494 FAD binding domain FY146_11975 PF01569 PAP2 superfamily FY146_11980 PF13288 DXP reductoisomerase C-terminal domain FY146_11980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY146_11980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY146_11985 PF00155 Aminotransferase class I and II FY146_11995 PF01103 Surface antigen FY146_11995 PF07244 Surface antigen variable number repeat FY146_11995 PF17243 POTRA domain TamA domain 1 FY146_12005 PF01584 CheW-like domain FY146_12010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_12010 PF13426 PAS domain FY146_12010 PF08447 PAS fold FY146_12015 PF02634 FdhD/NarQ family FY146_12020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY146_12025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY146_12025 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY146_12030 PF00231 ATP synthase FY146_12035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY146_12035 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY146_12035 PF00306 ATP synthase alpha/beta chain, C terminal domain FY146_12040 PF00213 ATP synthase delta (OSCP) subunit FY146_12050 PF18074 Primosomal protein N C-terminal domain FY146_12050 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY146_12050 PF17764 3′ DNA-binding domain (3′BD) FY146_12050 PF00270 DEAD/DEAH box helicase FY146_12055 PF02899 Phage integrase, N-terminal SAM-like domain FY146_12055 PF00589 Phage integrase family FY146_12075 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_12075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY146_12080 PF01810 LysE type translocator FY146_12090 PF00364 Biotin-requiring enzyme FY146_12090 PF02817 e3 binding domain FY146_12090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY146_12095 PF02779 Transketolase, pyrimidine binding domain FY146_12095 PF16870 2-oxoglutarate dehydrogenase C-terminal FY146_12095 PF00676 Dehydrogenase E1 component FY146_12095 PF16078 2-oxoglutarate dehydrogenase N-terminus FY146_12100 PF00549 CoA-ligase FY146_12100 PF02629 CoA binding domain FY146_12105 PF00549 CoA-ligase FY146_12105 PF08442 ATP-grasp domain FY146_12110 PF00056 lactate/malate dehydrogenase, NAD binding domain FY146_12110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY146_12115 PF03969 AFG1-like ATPase FY146_12120 PF02974 Protease inhibitor Inh FY146_12125 PF13085 2Fe-2S iron-sulfur cluster binding domain FY146_12125 PF13237 4Fe-4S dicluster domain FY146_12130 PF00890 FAD binding domain FY146_12130 PF02910 Fumarate reductase flavoprotein C-term FY146_12140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY146_12165 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY146_12165 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY146_12170 PF00814 Glycoprotease family FY146_12175 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY146_12175 PF03900 Porphobilinogen deaminase, C-terminal domain FY146_12200 PF00117 Glutamine amidotransferase class-I FY146_12210 PF02325 YGGT family FY146_12215 PF02594 Uncharacterised ACR, YggU family COG1872 FY146_12220 PF00719 Inorganic pyrophosphatase FY146_12230 PF00679 Elongation factor G C-terminus FY146_12230 PF03144 Elongation factor Tu domain 2 FY146_12230 PF00009 Elongation factor Tu GTP binding domain FY146_12235 PF01432 Peptidase family M3 FY146_12240 PF01047 MarR family FY146_12245 PF07690 Major Facilitator Superfamily FY146_12250 PF00764 Arginosuccinate synthase FY146_12255 PF00106 short chain dehydrogenase FY146_12260 PF01810 LysE type translocator FY146_12265 PF00005 ABC transporter FY146_12270 PF02653 Branched-chain amino acid transport system / permease component FY146_12280 PF04055 Radical SAM superfamily FY146_12295 PF01329 Pterin 4 alpha carbinolamine dehydratase FY146_12300 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY146_12305 PF02834 LigT like Phosphoesterase FY146_12310 PF13472 GDSL-like Lipase/Acylhydrolase family FY146_12315 PF00005 ABC transporter FY146_12325 PF01027 Inhibitor of apoptosis-promoting Bax1 FY146_12340 PF00694 Aconitase C-terminal domain FY146_12340 PF00330 Aconitase family (aconitate hydratase) FY146_12345 PF00005 ABC transporter FY146_12350 PF03379 CcmB protein FY146_12355 PF01578 Cytochrome C assembly protein FY146_12365 PF08534 Redoxin FY146_12370 PF00990 Diguanylate cyclase, GGDEF domain FY146_12375 PF10755 Protein of unknown function (DUF2585) FY146_12380 PF04279 Intracellular septation protein A FY146_12385 PF00448 SRP54-type protein, GTPase domain FY146_12385 PF02881 SRP54-type protein, helical bundle domain FY146_12390 PF00919 Uncharacterized protein family UPF0004 FY146_12390 PF04055 Radical SAM superfamily FY146_12395 PF01678 Diaminopimelate epimerase FY146_12400 PF12706 Beta-lactamase superfamily domain FY146_12410 PF00448 SRP54-type protein, GTPase domain FY146_12410 PF02881 SRP54-type protein, helical bundle domain FY146_12410 PF02978 Signal peptide binding domain FY146_12415 PF01817 Chorismate mutase type II FY146_12415 PF02153 Prephenate dehydrogenase FY146_12420 PF00886 Ribosomal protein S16 FY146_12425 PF05239 PRC-barrel domain FY146_12425 PF01782 RimM N-terminal domain FY146_12430 PF01746 tRNA (Guanine-1)-methyltransferase FY146_12440 PF01245 Ribosomal protein L19 FY146_12445 PF00664 ABC transporter transmembrane region FY146_12445 PF00005 ABC transporter FY146_12450 PF00529 HlyD membrane-fusion protein of T1SS FY146_12450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_12460 PF07690 Major Facilitator Superfamily FY146_12465 PF00330 Aconitase family (aconitate hydratase) FY146_12480 PF01435 Peptidase family M48 FY146_12485 PF00005 ABC transporter FY146_12490 PF00528 Binding-protein-dependent transport system inner membrane component FY146_12495 PF01547 Bacterial extracellular solute-binding protein FY146_12505 PF00005 ABC transporter FY146_12505 PF16326 ABC transporter C-terminal domain FY146_12515 PF04204 Homoserine O-succinyltransferase FY146_12520 PF01263 Aldose 1-epimerase FY146_12525 PF00912 Transglycosylase FY146_12530 PF00348 Polyprenyl synthetase FY146_12535 PF13488 Glycine zipper FY146_12535 PF00691 OmpA family FY146_12540 PF04551 GcpE protein FY146_12545 PF07690 Major Facilitator Superfamily FY146_12550 PF00455 DeoR C terminal sensor domain FY146_12550 PF08220 DeoR-like helix-turn-helix domain FY146_12555 PF02785 Biotin carboxylase C-terminal domain FY146_12555 PF00289 Biotin carboxylase, N-terminal domain FY146_12555 PF00364 Biotin-requiring enzyme FY146_12555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_12555 PF00682 HMGL-like FY146_12555 PF02436 Conserved carboxylase domain FY146_12560 PF00196 Bacterial regulatory proteins, luxR family FY146_12560 PF00072 Response regulator receiver domain FY146_12565 PF00664 ABC transporter transmembrane region FY146_12565 PF00005 ABC transporter FY146_12575 PF10091 Putative glucoamylase FY146_12575 PF06165 Glycosyltransferase family 36 FY146_12575 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY146_12580 PF07687 Peptidase dimerisation domain FY146_12580 PF01546 Peptidase family M20/M25/M40 FY146_12585 PF01266 FAD dependent oxidoreductase FY146_12590 PF00291 Pyridoxal-phosphate dependent enzyme FY146_12595 PF00920 Dehydratase family FY146_12600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY146_12600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY146_12605 PF01370 NAD dependent epimerase/dehydratase family FY146_12610 PF01565 FAD binding domain FY146_12610 PF02913 FAD linked oxidases, C-terminal domain FY146_12615 PF00392 Bacterial regulatory proteins, gntR family FY146_12615 PF07729 FCD domain FY146_12625 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY146_12630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY146_12635 PF03480 Bacterial extracellular solute-binding protein, family 7 FY146_12640 PF16177 Acetyl-coenzyme A synthetase N-terminus FY146_12640 PF00501 AMP-binding enzyme FY146_12640 PF13193 AMP-binding enzyme C-terminal domain FY146_12650 PF01168 Alanine racemase, N-terminal domain FY146_12655 PF13603 Leucyl-tRNA synthetase, Domain 2 FY146_12655 PF00133 tRNA synthetases class I (I, L, M and V) FY146_12655 PF08264 Anticodon-binding domain of tRNA FY146_12670 PF11953 Domain of unknown function (DUF3470) FY146_12670 PF00037 4Fe-4S binding domain FY146_12675 PF01479 S4 domain FY146_12675 PF00579 tRNA synthetases class I (W and Y) FY146_12690 PF01494 FAD binding domain FY146_12700 PF00543 Nitrogen regulatory protein P-II FY146_12705 PF00909 Ammonium Transporter Family FY146_12710 PF09397 Ftsk gamma domain FY146_12710 PF01580 FtsK/SpoIIIE family FY146_12710 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY146_12710 PF17854 FtsK alpha domain FY146_12715 PF03548 Outer membrane lipoprotein carrier protein LolA FY146_12730 PF00072 Response regulator receiver domain FY146_12730 PF00486 Transcriptional regulatory protein, C terminal FY146_12740 PF02559 CarD-like/TRCF domain FY146_12745 PF05088 Bacterial NAD-glutamate dehydrogenase FY146_12750 PF11700 Vacuole effluxer Atg22 like FY146_12755 PF05233 PHB accumulation regulatory domain FY146_12755 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY146_12760 PF02803 Thiolase, C-terminal domain FY146_12760 PF00108 Thiolase, N-terminal domain FY146_12775 PF00210 Ferritin-like domain FY146_12780 PF00293 NUDIX domain FY146_12785 PF04748 Divergent polysaccharide deacetylase FY146_12790 PF13180 PDZ domain FY146_12790 PF03572 Peptidase family S41 FY146_12800 PF02590 Predicted SPOUT methyltransferase FY146_12810 PF01467 Cytidylyltransferase-like FY146_12815 PF00171 Aldehyde dehydrogenase family FY146_12820 PF00696 Amino acid kinase family FY146_12820 PF01472 PUA domain FY146_12825 PF01018 GTP1/OBG FY146_12825 PF01926 50S ribosome-binding GTPase FY146_12830 PF13302 Acetyltransferase (GNAT) domain FY146_12840 PF01016 Ribosomal L27 protein FY146_12845 PF00829 Ribosomal prokaryotic L21 protein FY146_12860 PF03328 HpcH/HpaI aldolase/citrate lyase family FY146_12870 PF00694 Aconitase C-terminal domain FY146_12875 PF00180 Isocitrate/isopropylmalate dehydrogenase FY146_12880 PF03150 Di-haem cytochrome c peroxidase FY146_12885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY146_12885 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY146_12890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_12895 PF01888 CbiD FY146_12900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_12910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_12915 PF02571 Precorrin-6x reductase CbiJ/CobK FY146_12920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_12925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_12930 PF02570 Precorrin-8X methylmutase FY146_12935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY146_12940 PF02514 CobN/Magnesium Chelatase FY146_12945 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY146_12945 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY146_12955 PF12557 Cob(I)alamin adenosyltransferase N terminal FY146_12955 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY146_12960 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY146_12960 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY146_12965 PF03186 CobD/Cbib protein FY146_12970 PF00155 Aminotransferase class I and II FY146_12975 PF13378 Enolase C-terminal domain-like FY146_12975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_12980 PF05336 L-rhamnose mutarotase FY146_12985 PF08125 Mannitol dehydrogenase C-terminal domain FY146_12985 PF01232 Mannitol dehydrogenase Rossmann domain FY146_12990 PF08240 Alcohol dehydrogenase GroES-like domain FY146_12990 PF00107 Zinc-binding dehydrogenase FY146_13000 PF00248 Aldo/keto reductase family FY146_13010 PF02653 Branched-chain amino acid transport system / permease component FY146_13015 PF00005 ABC transporter FY146_13020 PF07729 FCD domain FY146_13020 PF00392 Bacterial regulatory proteins, gntR family FY146_13025 PF08666 SAF domain FY146_13025 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY146_13030 PF01808 AICARFT/IMPCHase bienzyme FY146_13030 PF02142 MGS-like domain FY146_13040 PF01189 16S rRNA methyltransferase RsmB/F FY146_13040 PF01029 NusB family FY146_13045 PF01435 Peptidase family M48 FY146_13055 PF17762 HTH domain found in ParB protein FY146_13055 PF02195 ParB-like nuclease domain FY146_13060 PF13614 AAA domain FY146_13065 PF02527 rRNA small subunit methyltransferase G FY146_13070 PF13932 GidA associated domain FY146_13070 PF01134 Glucose inhibited division protein A FY146_13075 PF01926 50S ribosome-binding GTPase FY146_13075 PF12631 MnmE helical domain FY146_13075 PF10396 GTP-binding protein TrmE N-terminus FY146_13080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY146_13080 PF07498 Rho termination factor, N-terminal domain FY146_13080 PF07497 Rho termination factor, RNA-binding domain FY146_13085 PF03653 Uncharacterised protein family (UPF0093) FY146_13090 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY146_13095 PF03618 Kinase/pyrophosphorylase FY146_13100 PF02545 Maf-like protein FY146_13105 PF08501 Shikimate dehydrogenase substrate binding domain FY146_13105 PF01488 Shikimate / quinate 5-dehydrogenase FY146_13105 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY146_13110 PF01121 Dephospho-CoA kinase FY146_13115 PF00929 Exonuclease FY146_13120 PF02556 Preprotein translocase subunit SecB FY146_13125 PF04186 FxsA cytoplasmic membrane protein FY146_13135 PF06725 3D domain FY146_13135 PF03562 MltA specific insert domain FY146_13150 PF00204 DNA gyrase B FY146_13150 PF00986 DNA gyrase B subunit, carboxyl terminus FY146_13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_13150 PF01751 Toprim domain FY146_13160 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY146_13175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY146_13180 PF00291 Pyridoxal-phosphate dependent enzyme FY146_13185 PF00290 Tryptophan synthase alpha chain FY146_13190 PF01039 Carboxyl transferase domain FY146_13195 PF08245 Mur ligase middle domain FY146_13195 PF02875 Mur ligase family, glutamate ligase domain FY146_13200 PF00085 Thioredoxin FY146_13205 PF12705 PD-(D/E)XK nuclease superfamily FY146_13205 PF00580 UvrD/REP helicase N-terminal domain FY146_13205 PF13361 UvrD-like helicase C-terminal domain FY146_13215 PF12804 MobA-like NTP transferase domain FY146_13220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY146_13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_13225 PF00512 His Kinase A (phospho-acceptor) domain FY146_13230 PF05221 S-adenosyl-L-homocysteine hydrolase FY146_13230 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY146_13235 PF00381 PTS HPr component phosphorylation site FY146_13240 PF03610 PTS system fructose IIA component FY146_13240 PF03830 PTS system sorbose subfamily IIB component FY146_13245 PF02603 HPr Serine kinase N terminus FY146_13245 PF07475 HPr Serine kinase C-terminal domain FY146_13250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_13250 PF13756 Stimulus-sensing domain FY146_13250 PF00512 His Kinase A (phospho-acceptor) domain FY146_13250 PF13755 Sensor N-terminal transmembrane domain FY146_13250 PF00672 HAMP domain FY146_13255 PF00072 Response regulator receiver domain FY146_13255 PF00486 Transcriptional regulatory protein, C terminal FY146_13260 PF01293 Phosphoenolpyruvate carboxykinase FY146_13265 PF00472 RF-1 domain FY146_13270 PF01476 LysM domain FY146_13270 PF04972 BON domain FY146_13275 PF00485 Phosphoribulokinase / Uridine kinase family FY146_13280 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY146_13285 PF00977 Histidine biosynthesis protein FY146_13290 PF00977 Histidine biosynthesis protein FY146_13295 PF00117 Glutamine amidotransferase class-I FY146_13305 PF00475 Imidazoleglycerol-phosphate dehydratase FY146_13310 PF00227 Proteasome subunit FY146_13315 PF00004 ATPase family associated with various cellular activities (AAA) FY146_13315 PF10431 C-terminal, D2-small domain, of ClpB protein FY146_13315 PF07724 AAA domain (Cdc48 subfamily) FY146_13325 PF01274 Malate synthase FY146_13340 PF00072 Response regulator receiver domain FY146_13345 PF00512 His Kinase A (phospho-acceptor) domain FY146_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_13350 PF04408 Helicase associated domain (HA2) FY146_13350 PF00271 Helicase conserved C-terminal domain FY146_13350 PF08482 ATP-dependent helicase C-terminal FY146_13350 PF00270 DEAD/DEAH box helicase FY146_13390 PF00270 DEAD/DEAH box helicase FY146_13390 PF00271 Helicase conserved C-terminal domain FY146_13390 PF00570 HRDC domain FY146_13390 PF16124 RecQ zinc-binding FY146_13390 PF09382 RQC domain FY146_13395 PF00480 ROK family FY146_13400 PF13407 Periplasmic binding protein domain FY146_13405 PF02653 Branched-chain amino acid transport system / permease component FY146_13410 PF00005 ABC transporter FY146_13415 PF00485 Phosphoribulokinase / Uridine kinase family FY146_13420 PF00462 Glutaredoxin FY146_13425 PF07972 NrdI Flavodoxin like FY146_13430 PF02867 Ribonucleotide reductase, barrel domain FY146_13430 PF00317 Ribonucleotide reductase, all-alpha domain FY146_13430 PF08343 Ribonucleotide reductase N-terminal FY146_13435 PF00268 Ribonucleotide reductase, small chain FY146_13445 PF02463 RecF/RecN/SMC N terminal domain FY146_13450 PF00581 Rhodanese-like domain FY146_13450 PF00899 ThiF family FY146_13465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_13465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_13475 PF00294 pfkB family carbohydrate kinase FY146_13485 PF08468 Methyltransferase small domain N-terminal FY146_13485 PF05175 Methyltransferase small domain FY146_13490 PF00013 KH domain FY146_13490 PF01138 3' exoribonuclease family, domain 1 FY146_13490 PF03725 3' exoribonuclease family, domain 2 FY146_13490 PF00575 S1 RNA binding domain FY146_13490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY146_13495 PF00312 Ribosomal protein S15 FY146_13500 PF09157 Pseudouridine synthase II TruB, C-terminal FY146_13500 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY146_13500 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY146_13505 PF02033 Ribosome-binding factor A FY146_13510 PF04760 Translation initiation factor IF-2, N-terminal region FY146_13510 PF00009 Elongation factor Tu GTP binding domain FY146_13510 PF11987 Translation-initiation factor 2 FY146_13510 PF08364 Bacterial translation initiation factor IF-2 associated region FY146_13510 PF03144 Elongation factor Tu domain 2 FY146_13520 PF13184 NusA-like KH domain FY146_13520 PF08529 NusA N-terminal domain FY146_13520 PF00575 S1 RNA binding domain FY146_13525 PF02576 RimP N-terminal domain FY146_13525 PF17384 RimP C-terminal SH3 domain FY146_13530 PF05977 Transmembrane secretion effector FY146_13540 PF13406 Transglycosylase SLT domain FY146_13545 PF02132 RecR protein FY146_13545 PF13662 Toprim domain FY146_13555 PF02575 YbaB/EbfC DNA-binding family FY146_13560 PF12169 DNA polymerase III subunits gamma and tau domain III FY146_13560 PF12170 DNA polymerase III tau subunit V interacting with alpha FY146_13560 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY146_13575 PF00293 NUDIX domain FY146_13575 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY146_13575 PF09297 NADH pyrophosphatase zinc ribbon domain FY146_13580 PF01817 Chorismate mutase type II FY146_13580 PF00800 Prephenate dehydratase FY146_13585 PF02348 Cytidylyltransferase FY146_13590 PF00034 Cytochrome c FY146_13595 PF02397 Bacterial sugar transferase FY146_13600 PF00905 Penicillin binding protein transpeptidase domain FY146_13600 PF00912 Transglycosylase FY146_13605 PF04073 Aminoacyl-tRNA editing domain FY146_13610 PF00313 'Cold-shock' DNA-binding domain FY146_13615 PF07687 Peptidase dimerisation domain FY146_13615 PF01546 Peptidase family M20/M25/M40 FY146_13620 PF01047 MarR family FY146_13625 PF01612 3'-5' exonuclease FY146_13625 PF00476 DNA polymerase family A FY146_13625 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY146_13625 PF01367 5'-3' exonuclease, C-terminal SAM fold FY146_13630 PF01783 Ribosomal L32p protein family FY146_13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_13635 PF02743 Cache domain FY146_13635 PF00512 His Kinase A (phospho-acceptor) domain FY146_13640 PF00072 Response regulator receiver domain FY146_13640 PF02954 Bacterial regulatory protein, Fis family FY146_13640 PF00158 Sigma-54 interaction domain FY146_13645 PF03401 Tripartite tricarboxylate transporter family receptor FY146_13650 PF07331 Tripartite tricarboxylate transporter TctB family FY146_13655 PF01970 Tripartite tricarboxylate transporter TctA family FY146_13660 PF04102 SlyX FY146_13670 PF00226 DnaJ domain FY146_13670 PF01556 DnaJ C terminal domain FY146_13670 PF00684 DnaJ central domain FY146_13675 PF00012 Hsp70 protein FY146_13690 PF01625 Peptide methionine sulfoxide reductase FY146_13695 PF02608 ABC transporter substrate-binding protein PnrA-like FY146_13700 PF00005 ABC transporter FY146_13705 PF02653 Branched-chain amino acid transport system / permease component FY146_13710 PF02653 Branched-chain amino acid transport system / permease component FY146_13715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY146_13720 PF01048 Phosphorylase superfamily FY146_13725 PF01791 DeoC/LacD family aldolase FY146_13730 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY146_13730 PF00591 Glycosyl transferase family, a/b domain FY146_13730 PF02885 Glycosyl transferase family, helical bundle domain FY146_13745 PF00962 Adenosine/AMP deaminase FY146_13750 PF01676 Metalloenzyme superfamily FY146_13760 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY146_13765 PF00510 Cytochrome c oxidase subunit III FY146_13770 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY146_13775 PF06481 COX Aromatic Rich Motif FY146_13775 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY146_13780 PF07690 Major Facilitator Superfamily FY146_13780 PF00083 Sugar (and other) transporter FY146_13785 PF04898 Glutamate synthase central domain FY146_13785 PF01645 Conserved region in glutamate synthase FY146_13785 PF01493 GXGXG motif FY146_13785 PF00310 Glutamine amidotransferases class-II FY146_13790 PF00667 FAD binding domain FY146_13790 PF00258 Flavodoxin FY146_13790 PF00175 Oxidoreductase NAD-binding domain FY146_13810 PF00109 Beta-ketoacyl synthase, N-terminal domain FY146_13810 PF02801 Beta-ketoacyl synthase, C-terminal domain FY146_13815 PF07977 FabA-like domain FY146_13825 PF03458 UPF0126 domain FY146_13835 PF06912 Protein of unknown function (DUF1275) FY146_13845 PF00528 Binding-protein-dependent transport system inner membrane component FY146_13850 PF00005 ABC transporter FY146_13855 PF00392 Bacterial regulatory proteins, gntR family FY146_13855 PF07702 UTRA domain FY146_13860 PF01618 MotA/TolQ/ExbB proton channel family FY146_13865 PF02472 Biopolymer transport protein ExbD/TolR FY146_13875 PF02615 Malate/L-lactate dehydrogenase FY146_13890 PF00625 Guanylate kinase FY146_13895 PF07969 Amidohydrolase family FY146_13900 PF06299 Protein of unknown function (DUF1045) FY146_13905 PF00528 Binding-protein-dependent transport system inner membrane component FY146_13910 PF00528 Binding-protein-dependent transport system inner membrane component FY146_13920 PF00005 ABC transporter FY146_13930 PF00005 ABC transporter FY146_13935 PF00005 ABC transporter FY146_13940 PF06007 Phosphonate metabolism protein PhnJ FY146_13945 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY146_13950 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY146_13955 PF06754 Phosphonate metabolism protein PhnG FY146_13960 PF07702 UTRA domain FY146_13960 PF00392 Bacterial regulatory proteins, gntR family FY146_13965 PF05173 Dihydrodipicolinate reductase, C-terminus FY146_13965 PF01113 Dihydrodipicolinate reductase, N-terminus FY146_13970 PF02685 Glucokinase FY146_13975 PF02142 MGS-like domain FY146_13980 PF03411 Penicillin-insensitive murein endopeptidase FY146_13985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_13990 PF00528 Binding-protein-dependent transport system inner membrane component FY146_13995 PF00528 Binding-protein-dependent transport system inner membrane component FY146_13995 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_14000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_14000 PF00005 ABC transporter FY146_14005 PF01266 FAD dependent oxidoreductase FY146_14010 PF00120 Glutamine synthetase, catalytic domain FY146_14015 PF01266 FAD dependent oxidoreductase FY146_14025 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14030 PF00005 ABC transporter FY146_14035 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY146_14050 PF02082 Transcriptional regulator FY146_14055 PF13416 Bacterial extracellular solute-binding protein FY146_14065 PF05987 Bacterial protein of unknown function (DUF898) FY146_14070 PF00171 Aldehyde dehydrogenase family FY146_14075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_14075 PF03466 LysR substrate binding domain FY146_14080 PF00892 EamA-like transporter family FY146_14095 PF00877 NlpC/P60 family FY146_14105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY146_14105 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY146_14110 PF00883 Cytosol aminopeptidase family, catalytic domain FY146_14110 PF02789 Cytosol aminopeptidase family, N-terminal domain FY146_14130 PF00437 Type II/IV secretion system protein FY146_14145 PF00263 Bacterial type II and III secretion system protein FY146_14145 PF04972 BON domain FY146_14145 PF13629 Pilus formation protein N terminal region FY146_14185 PF00117 Glutamine amidotransferase class-I FY146_14190 PF07411 Domain of unknown function (DUF1508) FY146_14195 PF01183 Glycosyl hydrolases family 25 FY146_14200 PF00892 EamA-like transporter family FY146_14205 PF00155 Aminotransferase class I and II FY146_14205 PF00392 Bacterial regulatory proteins, gntR family FY146_14220 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_14235 PF06421 GTP-binding protein LepA C-terminus FY146_14235 PF03144 Elongation factor Tu domain 2 FY146_14235 PF00009 Elongation factor Tu GTP binding domain FY146_14235 PF00679 Elongation factor G C-terminus FY146_14240 PF00795 Carbon-nitrogen hydrolase FY146_14270 PF12833 Helix-turn-helix domain FY146_14270 PF02311 AraC-like ligand binding domain FY146_14275 PF03480 Bacterial extracellular solute-binding protein, family 7 FY146_14300 PF05198 Translation initiation factor IF-3, N-terminal domain FY146_14300 PF00707 Translation initiation factor IF-3, C-terminal domain FY146_14305 PF01632 Ribosomal protein L35 FY146_14310 PF00453 Ribosomal protein L20 FY146_14320 PF01409 tRNA synthetases class II core domain (F) FY146_14320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY146_14325 PF03147 Ferredoxin-fold anticodon binding domain FY146_14325 PF03484 tRNA synthetase B5 domain FY146_14325 PF03483 B3/4 domain FY146_14325 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY146_14325 PF01588 Putative tRNA binding domain FY146_14330 PF00248 Aldo/keto reductase family FY146_14335 PF03466 LysR substrate binding domain FY146_14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_14345 PF00248 Aldo/keto reductase family FY146_14350 PF01965 DJ-1/PfpI family FY146_14350 PF12833 Helix-turn-helix domain FY146_14360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_14360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_14375 PF02601 Exonuclease VII, large subunit FY146_14375 PF13742 OB-fold nucleic acid binding domain FY146_14380 PF13378 Enolase C-terminal domain-like FY146_14380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_14385 PF00392 Bacterial regulatory proteins, gntR family FY146_14385 PF07729 FCD domain FY146_14390 PF01047 MarR family FY146_14400 PF02073 Thermophilic metalloprotease (M29) FY146_14405 PF04073 Aminoacyl-tRNA editing domain FY146_14410 PF03960 ArsC family FY146_14425 PF00440 Bacterial regulatory proteins, tetR family FY146_14435 PF00117 Glutamine amidotransferase class-I FY146_14435 PF00958 GMP synthase C terminal domain FY146_14450 PF03073 TspO/MBR family FY146_14475 PF01029 NusB family FY146_14475 PF01189 16S rRNA methyltransferase RsmB/F FY146_14480 PF03330 Lytic transglycolase FY146_14490 PF08331 Domain of unknown function (DUF1730) FY146_14495 PF13417 Glutathione S-transferase, N-terminal domain FY146_14495 PF00043 Glutathione S-transferase, C-terminal domain FY146_14500 PF02673 Bacitracin resistance protein BacA FY146_14515 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY146_14525 PF13649 Methyltransferase domain FY146_14530 PF00712 DNA polymerase III beta subunit, N-terminal domain FY146_14530 PF02767 DNA polymerase III beta subunit, central domain FY146_14530 PF02768 DNA polymerase III beta subunit, C-terminal domain FY146_14535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_14540 PF02021 Uncharacterised protein family UPF0102 FY146_14545 PF12464 Maltose acetyltransferase FY146_14545 PF14602 Hexapeptide repeat of succinyl-transferase FY146_14550 PF13416 Bacterial extracellular solute-binding protein FY146_14555 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14560 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14565 PF00005 ABC transporter FY146_14575 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY146_14575 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY146_14580 PF01078 Magnesium chelatase, subunit ChlI FY146_14580 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY146_14585 PF00291 Pyridoxal-phosphate dependent enzyme FY146_14590 PF01810 LysE type translocator FY146_14595 PF00692 dUTPase FY146_14600 PF00009 Elongation factor Tu GTP binding domain FY146_14600 PF03144 Elongation factor Tu domain 2 FY146_14600 PF16658 Class II release factor RF3, C-terminal domain FY146_14605 PF02441 Flavoprotein FY146_14605 PF04127 DNA / pantothenate metabolism flavoprotein FY146_14620 PF03109 ABC1 family FY146_14625 PF01209 ubiE/COQ5 methyltransferase family FY146_14630 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY146_14630 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY146_14630 PF06827 Zinc finger found in FPG and IleRS FY146_14635 PF00378 Enoyl-CoA hydratase/isomerase FY146_14640 PF01649 Ribosomal protein S20 FY146_14705 PF00005 ABC transporter FY146_14705 PF06472 ABC transporter transmembrane region 2 FY146_14730 PF01261 Xylose isomerase-like TIM barrel FY146_14735 PF00485 Phosphoribulokinase / Uridine kinase family FY146_14740 PF01261 Xylose isomerase-like TIM barrel FY146_14745 PF02653 Branched-chain amino acid transport system / permease component FY146_14750 PF02653 Branched-chain amino acid transport system / permease component FY146_14755 PF00005 ABC transporter FY146_14765 PF00356 Bacterial regulatory proteins, lacI family FY146_14775 PF01590 GAF domain FY146_14775 PF00158 Sigma-54 interaction domain FY146_14775 PF02954 Bacterial regulatory protein, Fis family FY146_14780 PF00107 Zinc-binding dehydrogenase FY146_14780 PF08240 Alcohol dehydrogenase GroES-like domain FY146_14790 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_14795 PF00330 Aconitase family (aconitate hydratase) FY146_14795 PF06434 Aconitate hydratase 2 N-terminus FY146_14795 PF11791 Aconitate B N-terminal domain FY146_14810 PF13953 PapC C-terminal domain FY146_14810 PF13954 PapC N-terminal domain FY146_14810 PF00577 Outer membrane usher protein FY146_14820 PF00005 ABC transporter FY146_14825 PF00005 ABC transporter FY146_14825 PF00664 ABC transporter transmembrane region FY146_14830 PF03401 Tripartite tricarboxylate transporter family receptor FY146_14835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY146_14835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY146_14845 PF05532 CsbD-like FY146_14865 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14870 PF00005 ABC transporter FY146_14870 PF17850 CysA C-terminal regulatory domain FY146_14880 PF00459 Inositol monophosphatase family FY146_14885 PF00005 ABC transporter FY146_14885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_14895 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14895 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_14900 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_14910 PF07729 FCD domain FY146_14910 PF00392 Bacterial regulatory proteins, gntR family FY146_14920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_14920 PF13378 Enolase C-terminal domain-like FY146_14925 PF00005 ABC transporter FY146_14925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_14930 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14930 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_14935 PF00528 Binding-protein-dependent transport system inner membrane component FY146_14940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_14945 PF07729 FCD domain FY146_14945 PF00392 Bacterial regulatory proteins, gntR family FY146_14950 PF08450 SMP-30/Gluconolactonase/LRE-like region FY146_14955 PF00701 Dihydrodipicolinate synthetase family FY146_14960 PF07690 Major Facilitator Superfamily FY146_14970 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY146_14970 PF01568 Molydopterin dinucleotide binding domain FY146_14970 PF00384 Molybdopterin oxidoreductase FY146_14970 PF00037 4Fe-4S binding domain FY146_14970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY146_14975 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY146_14975 PF00037 4Fe-4S binding domain FY146_14975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY146_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_14985 PF03466 LysR substrate binding domain FY146_14990 PF01613 Flavin reductase like domain FY146_14995 PF02530 Porin subfamily FY146_15000 PF00563 EAL domain FY146_15000 PF00990 Diguanylate cyclase, GGDEF domain FY146_15000 PF03707 Bacterial signalling protein N terminal repeat FY146_15005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_15005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_15010 PF00005 ABC transporter FY146_15015 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15020 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15025 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_15035 PF00356 Bacterial regulatory proteins, lacI family FY146_15040 PF05544 Proline racemase FY146_15050 PF01266 FAD dependent oxidoreductase FY146_15055 PF00005 ABC transporter FY146_15060 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15065 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15075 PF02615 Malate/L-lactate dehydrogenase FY146_15080 PF00701 Dihydrodipicolinate synthetase family FY146_15085 PF07729 FCD domain FY146_15085 PF00392 Bacterial regulatory proteins, gntR family FY146_15090 PF12327 FtsZ family, C-terminal domain FY146_15090 PF00091 Tubulin/FtsZ family, GTPase domain FY146_15095 PF00072 Response regulator receiver domain FY146_15115 PF00005 ABC transporter FY146_15120 PF13533 Biotin-lipoyl like FY146_15125 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY146_15125 PF02056 Family 4 glycosyl hydrolase FY146_15130 PF00005 ABC transporter FY146_15130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_15135 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15135 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_15140 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_15150 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY146_15150 PF02056 Family 4 glycosyl hydrolase FY146_15175 PF00480 ROK family FY146_15180 PF13416 Bacterial extracellular solute-binding protein FY146_15185 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15190 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15195 PF00206 Lyase FY146_15195 PF14698 Argininosuccinate lyase C-terminal FY146_15200 PF08402 TOBE domain FY146_15200 PF00005 ABC transporter FY146_15205 PF00294 pfkB family carbohydrate kinase FY146_15210 PF12411 Choline sulfatase enzyme C terminal FY146_15210 PF00884 Sulfatase FY146_15215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY146_15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_15220 PF03466 LysR substrate binding domain FY146_15225 PF00005 ABC transporter FY146_15230 PF01032 FecCD transport family FY146_15235 PF01032 FecCD transport family FY146_15245 PF00593 TonB dependent receptor FY146_15245 PF07715 TonB-dependent Receptor Plug Domain FY146_15250 PF12833 Helix-turn-helix domain FY146_15255 PF00141 Peroxidase FY146_15260 PF03466 LysR substrate binding domain FY146_15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_15270 PF00672 HAMP domain FY146_15270 PF00512 His Kinase A (phospho-acceptor) domain FY146_15275 PF00072 Response regulator receiver domain FY146_15275 PF00486 Transcriptional regulatory protein, C terminal FY146_15280 PF00529 HlyD membrane-fusion protein of T1SS FY146_15280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_15285 PF00873 AcrB/AcrD/AcrF family FY146_15295 PF01865 Protein of unknown function DUF47 FY146_15300 PF01384 Phosphate transporter family FY146_15305 PF02735 Ku70/Ku80 beta-barrel domain FY146_15310 PF13298 DNA polymerase Ligase (LigD) FY146_15310 PF04679 ATP dependent DNA ligase C terminal region FY146_15310 PF01068 ATP dependent DNA ligase domain FY146_15315 PF02735 Ku70/Ku80 beta-barrel domain FY146_15330 PF13188 PAS domain FY146_15330 PF03707 Bacterial signalling protein N terminal repeat FY146_15330 PF00990 Diguanylate cyclase, GGDEF domain FY146_15330 PF00563 EAL domain FY146_15340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_15345 PF03786 D-mannonate dehydratase (UxuA) FY146_15350 PF00392 Bacterial regulatory proteins, gntR family FY146_15350 PF07729 FCD domain FY146_15355 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15360 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_15360 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_15365 PF00005 ABC transporter FY146_15370 PF00005 ABC transporter FY146_15370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_15375 PF00005 ABC transporter FY146_15375 PF17912 MalK OB fold domain FY146_15375 PF03459 TOBE domain FY146_15380 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15385 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15395 PF01571 Aminomethyltransferase folate-binding domain FY146_15395 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY146_15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_15395 PF17806 Sarcosine oxidase A3 domain FY146_15400 PF00356 Bacterial regulatory proteins, lacI family FY146_15410 PF13361 UvrD-like helicase C-terminal domain FY146_15410 PF00580 UvrD/REP helicase N-terminal domain FY146_15415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY146_15420 PF16363 GDP-mannose 4,6 dehydratase FY146_15425 PF04321 RmlD substrate binding domain FY146_15430 PF00483 Nucleotidyl transferase FY146_15445 PF05045 Rhamnan synthesis protein F FY146_15475 PF01370 NAD dependent epimerase/dehydratase family FY146_15480 PF13580 SIS domain FY146_15485 PF00535 Glycosyl transferase family 2 FY146_15485 PF01501 Glycosyl transferase family 8 FY146_15495 PF03275 UDP-galactopyranose mutase FY146_15500 PF00664 ABC transporter transmembrane region FY146_15500 PF00005 ABC transporter FY146_15510 PF03466 LysR substrate binding domain FY146_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_15515 PF00248 Aldo/keto reductase family FY146_15530 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY146_15530 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY146_15535 PF11953 Domain of unknown function (DUF3470) FY146_15535 PF00037 4Fe-4S binding domain FY146_15545 PF12833 Helix-turn-helix domain FY146_15545 PF12852 Cupin FY146_15550 PF00106 short chain dehydrogenase FY146_15555 PF03009 Glycerophosphoryl diester phosphodiesterase family FY146_15560 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY146_15560 PF00480 ROK family FY146_15570 PF16220 Domain of unknown function (DUF4880) FY146_15570 PF04773 FecR protein FY146_15575 PF00593 TonB dependent receptor FY146_15575 PF07715 TonB-dependent Receptor Plug Domain FY146_15580 PF07690 Major Facilitator Superfamily FY146_15600 PF07470 Glycosyl Hydrolase Family 88 FY146_15610 PF00005 ABC transporter FY146_15610 PF17912 MalK OB fold domain FY146_15615 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15620 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15625 PF00356 Bacterial regulatory proteins, lacI family FY146_15635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_15635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_15640 PF01261 Xylose isomerase-like TIM barrel FY146_15645 PF13407 Periplasmic binding protein domain FY146_15650 PF13407 Periplasmic binding protein domain FY146_15655 PF00356 Bacterial regulatory proteins, lacI family FY146_15660 PF02803 Thiolase, C-terminal domain FY146_15660 PF00108 Thiolase, N-terminal domain FY146_15665 PF01144 Coenzyme A transferase FY146_15670 PF01144 Coenzyme A transferase FY146_15675 PF01614 Bacterial transcriptional regulator FY146_15675 PF09339 IclR helix-turn-helix domain FY146_15685 PF01494 FAD binding domain FY146_15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_15690 PF03466 LysR substrate binding domain FY146_15695 PF00561 alpha/beta hydrolase fold FY146_15700 PF02627 Carboxymuconolactone decarboxylase family FY146_15705 PF00775 Dioxygenase FY146_15705 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY146_15710 PF00775 Dioxygenase FY146_15715 PF10397 Adenylosuccinate lyase C-terminus FY146_15715 PF00206 Lyase FY146_15720 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15725 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15730 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_15735 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_15740 PF00005 ABC transporter FY146_15745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY146_15745 PF08501 Shikimate dehydrogenase substrate binding domain FY146_15750 PF01220 Dehydroquinase class II FY146_15760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_15760 PF01261 Xylose isomerase-like TIM barrel FY146_15775 PF00005 ABC transporter FY146_15775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_15780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_15785 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15790 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_15790 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15805 PF13458 Periplasmic binding protein FY146_15820 PF00005 ABC transporter FY146_15820 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_15825 PF00005 ABC transporter FY146_15835 PF00294 pfkB family carbohydrate kinase FY146_15840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY146_15840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY146_15840 PF00205 Thiamine pyrophosphate enzyme, central domain FY146_15845 PF01261 Xylose isomerase-like TIM barrel FY146_15850 PF04962 KduI/IolB family FY146_15855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_15855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_15860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_15860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_15865 PF00356 Bacterial regulatory proteins, lacI family FY146_15870 PF01047 MarR family FY146_15875 PF02633 Creatinine amidohydrolase FY146_15880 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY146_15880 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY146_15900 PF13505 Outer membrane protein beta-barrel domain FY146_15920 PF03824 High-affinity nickel-transport protein FY146_15940 PF01081 KDPG and KHG aldolase FY146_15945 PF01928 CYTH domain FY146_15955 PF17773 UPF0176 acylphosphatase like domain FY146_15955 PF00581 Rhodanese-like domain FY146_15960 PF03707 Bacterial signalling protein N terminal repeat FY146_15960 PF00990 Diguanylate cyclase, GGDEF domain FY146_15960 PF00563 EAL domain FY146_15960 PF13188 PAS domain FY146_15965 PF03180 NLPA lipoprotein FY146_15970 PF00528 Binding-protein-dependent transport system inner membrane component FY146_15975 PF00005 ABC transporter FY146_15975 PF09383 NIL domain FY146_15980 PF00881 Nitroreductase family FY146_15985 PF00232 Glycosyl hydrolase family 1 FY146_15990 PF01261 Xylose isomerase-like TIM barrel FY146_15995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY146_15995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY146_16000 PF00356 Bacterial regulatory proteins, lacI family FY146_16000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY146_16010 PF07690 Major Facilitator Superfamily FY146_16015 PF13533 Biotin-lipoyl like FY146_16020 PF00440 Bacterial regulatory proteins, tetR family FY146_16025 PF03471 Transporter associated domain FY146_16025 PF03741 Integral membrane protein TerC family FY146_16030 PF02080 TrkA-C domain FY146_16030 PF03600 Citrate transporter FY146_16035 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY146_16040 PF00152 tRNA synthetases class II (D, K and N) FY146_16040 PF01336 OB-fold nucleic acid binding domain FY146_16045 PF01734 Patatin-like phospholipase FY146_16055 PF01297 Zinc-uptake complex component A periplasmic FY146_16060 PF00005 ABC transporter FY146_16065 PF00950 ABC 3 transport family FY146_16070 PF00950 ABC 3 transport family FY146_16085 PF09339 IclR helix-turn-helix domain FY146_16085 PF01614 Bacterial transcriptional regulator FY146_16090 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY146_16095 PF04198 Putative sugar-binding domain FY146_16095 PF13936 Helix-turn-helix domain FY146_16110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY146_16110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY146_16120 PF00633 Helix-hairpin-helix motif FY146_16120 PF00730 HhH-GPD superfamily base excision DNA repair protein FY146_16120 PF10576 Iron-sulfur binding domain of endonuclease III FY146_16135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY146_16135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY146_16140 PF13419 Haloacid dehalogenase-like hydrolase FY146_16145 PF01232 Mannitol dehydrogenase Rossmann domain FY146_16145 PF08125 Mannitol dehydrogenase C-terminal domain FY146_16155 PF08402 TOBE domain FY146_16155 PF00005 ABC transporter FY146_16160 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16165 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16175 PF04198 Putative sugar-binding domain FY146_16180 PF00005 ABC transporter FY146_16180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_16185 PF01546 Peptidase family M20/M25/M40 FY146_16185 PF07687 Peptidase dimerisation domain FY146_16190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_16195 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16200 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16200 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_16210 PF01965 DJ-1/PfpI family FY146_16215 PF01425 Amidase FY146_16220 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_16220 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16225 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_16235 PF03466 LysR substrate binding domain FY146_16240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_16240 PF00005 ABC transporter FY146_16245 PF00005 ABC transporter FY146_16245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_16250 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_16250 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16255 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_16265 PF01244 Membrane dipeptidase (Peptidase family M19) FY146_16275 PF07687 Peptidase dimerisation domain FY146_16275 PF01546 Peptidase family M20/M25/M40 FY146_16280 PF07690 Major Facilitator Superfamily FY146_16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_16285 PF03466 LysR substrate binding domain FY146_16290 PF01979 Amidohydrolase family FY146_16290 PF13382 Adenine deaminase C-terminal domain FY146_16300 PF00005 ABC transporter FY146_16300 PF08402 TOBE domain FY146_16310 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16320 PF00356 Bacterial regulatory proteins, lacI family FY146_16325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_16325 PF03466 LysR substrate binding domain FY146_16330 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_16330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_16330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_16335 PF07715 TonB-dependent Receptor Plug Domain FY146_16345 PF00296 Luciferase-like monooxygenase FY146_16350 PF00005 ABC transporter FY146_16355 PF01032 FecCD transport family FY146_16360 PF01032 FecCD transport family FY146_16370 PF08021 Siderophore-interacting FAD-binding domain FY146_16370 PF04954 Siderophore-interacting protein FY146_16380 PF00550 Phosphopantetheine attachment site FY146_16380 PF00975 Thioesterase domain FY146_16380 PF00668 Condensation domain FY146_16380 PF13193 AMP-binding enzyme C-terminal domain FY146_16380 PF00501 AMP-binding enzyme FY146_16385 PF00975 Thioesterase domain FY146_16385 PF00501 AMP-binding enzyme FY146_16385 PF00668 Condensation domain FY146_16385 PF00550 Phosphopantetheine attachment site FY146_16390 PF00550 Phosphopantetheine attachment site FY146_16390 PF00501 AMP-binding enzyme FY146_16390 PF13193 AMP-binding enzyme C-terminal domain FY146_16390 PF00668 Condensation domain FY146_16395 PF00425 chorismate binding enzyme FY146_16400 PF13193 AMP-binding enzyme C-terminal domain FY146_16400 PF00501 AMP-binding enzyme FY146_16405 PF00857 Isochorismatase family FY146_16405 PF00550 Phosphopantetheine attachment site FY146_16415 PF01648 4'-phosphopantetheinyl transferase superfamily FY146_16415 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY146_16425 PF03264 NapC/NirT cytochrome c family, N-terminal region FY146_16430 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY146_16435 PF00384 Molybdopterin oxidoreductase FY146_16435 PF01568 Molydopterin dinucleotide binding domain FY146_16435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY146_16450 PF06796 Periplasmic nitrate reductase protein NapE FY146_16460 PF00005 ABC transporter FY146_16485 PF01136 Peptidase family U32 FY146_16495 PF04343 Protein of unknown function, DUF488 FY146_16500 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY146_16505 PF02441 Flavoprotein FY146_16515 PF00510 Cytochrome c oxidase subunit III FY146_16525 PF00034 Cytochrome c FY146_16530 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY146_16535 PF07728 AAA domain (dynein-related subfamily) FY146_16535 PF08406 CbbQ/NirQ/NorQ C-terminal FY146_16540 PF00092 von Willebrand factor type A domain FY146_16560 PF00394 Multicopper oxidase FY146_16560 PF07732 Multicopper oxidase FY146_16575 PF00034 Cytochrome c FY146_16595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_16595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_16605 PF00356 Bacterial regulatory proteins, lacI family FY146_16610 PF02653 Branched-chain amino acid transport system / permease component FY146_16615 PF02653 Branched-chain amino acid transport system / permease component FY146_16620 PF00005 ABC transporter FY146_16625 PF13407 Periplasmic binding protein domain FY146_16635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_16635 PF03466 LysR substrate binding domain FY146_16650 PF00356 Bacterial regulatory proteins, lacI family FY146_16655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_16655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_16660 PF01261 Xylose isomerase-like TIM barrel FY146_16665 PF13416 Bacterial extracellular solute-binding protein FY146_16670 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16675 PF00528 Binding-protein-dependent transport system inner membrane component FY146_16680 PF00005 ABC transporter FY146_16680 PF17912 MalK OB fold domain FY146_16680 PF03459 TOBE domain FY146_16695 PF03471 Transporter associated domain FY146_16695 PF03741 Integral membrane protein TerC family FY146_16700 PF00356 Bacterial regulatory proteins, lacI family FY146_16715 PF00459 Inositol monophosphatase family FY146_16720 PF03707 Bacterial signalling protein N terminal repeat FY146_16720 PF00990 Diguanylate cyclase, GGDEF domain FY146_16720 PF13188 PAS domain FY146_16720 PF00563 EAL domain FY146_16745 PF04717 Type VI secretion system, phage-baseplate injector FY146_16765 PF17871 AAA lid domain FY146_16765 PF00004 ATPase family associated with various cellular activities (AAA) FY146_16765 PF07724 AAA domain (Cdc48 subfamily) FY146_16765 PF10431 C-terminal, D2-small domain, of ClpB protein FY146_16775 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY146_16780 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY146_16800 PF05947 Type VI secretion system, TssF FY146_16815 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY146_16820 PF00691 OmpA family FY146_16825 PF14331 ImcF-related N-terminal domain FY146_16825 PF06744 Type VI secretion protein IcmF C-terminal FY146_16825 PF06761 Intracellular multiplication and human macrophage-killing FY146_16835 PF07238 PilZ domain FY146_16835 PF00069 Protein kinase domain FY146_16840 PF02563 Polysaccharide biosynthesis/export protein FY146_16850 PF00083 Sugar (and other) transporter FY146_16850 PF08946 Osmosensory transporter coiled coil FY146_16860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY146_16860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY146_16865 PF00106 short chain dehydrogenase FY146_16870 PF02653 Branched-chain amino acid transport system / permease component FY146_16875 PF00005 ABC transporter FY146_16880 PF13407 Periplasmic binding protein domain FY146_16885 PF12833 Helix-turn-helix domain FY146_16890 PF00107 Zinc-binding dehydrogenase FY146_16890 PF08240 Alcohol dehydrogenase GroES-like domain FY146_16905 PF00005 ABC transporter FY146_16915 PF00245 Alkaline phosphatase FY146_16920 PF00440 Bacterial regulatory proteins, tetR family FY146_16935 PF00551 Formyl transferase FY146_16940 PF00464 Serine hydroxymethyltransferase FY146_16950 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY146_16950 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_16950 PF17806 Sarcosine oxidase A3 domain FY146_16950 PF01571 Aminomethyltransferase folate-binding domain FY146_16960 PF01266 FAD dependent oxidoreductase FY146_16975 PF00701 Dihydrodipicolinate synthetase family FY146_16980 PF00171 Aldehyde dehydrogenase family FY146_16985 PF01266 FAD dependent oxidoreductase FY146_16995 PF00005 ABC transporter FY146_16995 PF00571 CBS domain FY146_17000 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17005 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17010 PF05544 Proline racemase FY146_17015 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY146_17015 PF03807 NADP oxidoreductase coenzyme F420-dependent FY146_17025 PF00111 2Fe-2S iron-sulfur cluster binding domain FY146_17025 PF00175 Oxidoreductase NAD-binding domain FY146_17025 PF00970 Oxidoreductase FAD-binding domain FY146_17030 PF00355 Rieske [2Fe-2S] domain FY146_17030 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY146_17050 PF01638 HxlR-like helix-turn-helix FY146_17055 PF08240 Alcohol dehydrogenase GroES-like domain FY146_17055 PF00107 Zinc-binding dehydrogenase FY146_17060 PF13382 Adenine deaminase C-terminal domain FY146_17060 PF01979 Amidohydrolase family FY146_17075 PF00005 ABC transporter FY146_17100 PF07690 Major Facilitator Superfamily FY146_17110 PF01979 Amidohydrolase family FY146_17120 PF00817 impB/mucB/samB family FY146_17120 PF11799 impB/mucB/samB family C-terminal domain FY146_17140 PF00005 ABC transporter FY146_17140 PF17912 MalK OB fold domain FY146_17145 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17150 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17175 PF08220 DeoR-like helix-turn-helix domain FY146_17175 PF00455 DeoR C terminal sensor domain FY146_17180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY146_17180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY146_17185 PF00005 ABC transporter FY146_17190 PF02653 Branched-chain amino acid transport system / permease component FY146_17195 PF13407 Periplasmic binding protein domain FY146_17200 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY146_17200 PF00480 ROK family FY146_17210 PF01177 Asp/Glu/Hydantoin racemase FY146_17215 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17220 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17230 PF00005 ABC transporter FY146_17230 PF08402 TOBE domain FY146_17250 PF00196 Bacterial regulatory proteins, luxR family FY146_17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_17260 PF00672 HAMP domain FY146_17260 PF00512 His Kinase A (phospho-acceptor) domain FY146_17265 PF00486 Transcriptional regulatory protein, C terminal FY146_17265 PF00072 Response regulator receiver domain FY146_17285 PF00005 ABC transporter FY146_17285 PF12704 MacB-like periplasmic core domain FY146_17285 PF02687 FtsX-like permease family FY146_17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_17295 PF03466 LysR substrate binding domain FY146_17305 PF00510 Cytochrome c oxidase subunit III FY146_17310 PF00510 Cytochrome c oxidase subunit III FY146_17315 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY146_17320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY146_17325 PF00034 Cytochrome c FY146_17340 PF02910 Fumarate reductase flavoprotein C-term FY146_17340 PF00890 FAD binding domain FY146_17345 PF00732 GMC oxidoreductase FY146_17345 PF05199 GMC oxidoreductase FY146_17350 PF00732 GMC oxidoreductase FY146_17350 PF05199 GMC oxidoreductase FY146_17355 PF00005 ABC transporter FY146_17355 PF03459 TOBE domain FY146_17355 PF17912 MalK OB fold domain FY146_17360 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17365 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17370 PF01547 Bacterial extracellular solute-binding protein FY146_17375 PF00171 Aldehyde dehydrogenase family FY146_17380 PF00378 Enoyl-CoA hydratase/isomerase FY146_17385 PF01144 Coenzyme A transferase FY146_17390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_17390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_17395 PF00356 Bacterial regulatory proteins, lacI family FY146_17400 PF03928 Haem-degrading FY146_17405 PF07715 TonB-dependent Receptor Plug Domain FY146_17410 PF01497 Periplasmic binding protein FY146_17415 PF01032 FecCD transport family FY146_17420 PF01032 FecCD transport family FY146_17425 PF00005 ABC transporter FY146_17440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY146_17440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY146_17445 PF04324 BFD-like [2Fe-2S] binding domain FY146_17445 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_17450 PF01266 FAD dependent oxidoreductase FY146_17450 PF04324 BFD-like [2Fe-2S] binding domain FY146_17455 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17460 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17465 PF08402 TOBE domain FY146_17465 PF00005 ABC transporter FY146_17480 PF00795 Carbon-nitrogen hydrolase FY146_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_17485 PF03466 LysR substrate binding domain FY146_17490 PF00857 Isochorismatase family FY146_17495 PF03466 LysR substrate binding domain FY146_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_17505 PF03466 LysR substrate binding domain FY146_17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_17510 PF05163 DinB family FY146_17515 PF00293 NUDIX domain FY146_17520 PF02567 Phenazine biosynthesis-like protein FY146_17535 PF00155 Aminotransferase class I and II FY146_17535 PF00392 Bacterial regulatory proteins, gntR family FY146_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_17545 PF03466 LysR substrate binding domain FY146_17560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_17565 PF00881 Nitroreductase family FY146_17580 PF01323 DSBA-like thioredoxin domain FY146_17585 PF01565 FAD binding domain FY146_17585 PF02913 FAD linked oxidases, C-terminal domain FY146_17590 PF01568 Molydopterin dinucleotide binding domain FY146_17590 PF00384 Molybdopterin oxidoreductase FY146_17595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_17600 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17605 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_17605 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17610 PF00005 ABC transporter FY146_17610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_17620 PF00296 Luciferase-like monooxygenase FY146_17625 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY146_17630 PF03358 NADPH-dependent FMN reductase FY146_17645 PF01053 Cys/Met metabolism PLP-dependent enzyme FY146_17650 PF01037 Lrp/AsnC ligand binding domain FY146_17655 PF02733 Dak1 domain FY146_17665 PF00106 short chain dehydrogenase FY146_17670 PF02798 Glutathione S-transferase, N-terminal domain FY146_17675 PF00873 AcrB/AcrD/AcrF family FY146_17680 PF13533 Biotin-lipoyl like FY146_17685 PF00440 Bacterial regulatory proteins, tetR family FY146_17690 PF00109 Beta-ketoacyl synthase, N-terminal domain FY146_17690 PF02801 Beta-ketoacyl synthase, C-terminal domain FY146_17695 PF00091 Tubulin/FtsZ family, GTPase domain FY146_17695 PF12327 FtsZ family, C-terminal domain FY146_17710 PF01554 MatE FY146_17730 PF00753 Metallo-beta-lactamase superfamily FY146_17735 PF03466 LysR substrate binding domain FY146_17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_17745 PF01638 HxlR-like helix-turn-helix FY146_17755 PF00005 ABC transporter FY146_17755 PF02687 FtsX-like permease family FY146_17755 PF12704 MacB-like periplasmic core domain FY146_17760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_17765 PF11808 Phosphate regulon sensor protein PhoR FY146_17765 PF00512 His Kinase A (phospho-acceptor) domain FY146_17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_17765 PF00989 PAS fold FY146_17770 PF00486 Transcriptional regulatory protein, C terminal FY146_17770 PF00072 Response regulator receiver domain FY146_17790 PF03527 RHS protein FY146_17790 PF05593 RHS Repeat FY146_17810 PF04717 Type VI secretion system, phage-baseplate injector FY146_17820 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17820 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_17845 PF13784 Fic/DOC family N-terminal FY146_17845 PF02661 Fic/DOC family FY146_17860 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_17865 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17870 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_17900 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17905 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_17905 PF00528 Binding-protein-dependent transport system inner membrane component FY146_17910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_17910 PF00005 ABC transporter FY146_17915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_17915 PF00005 ABC transporter FY146_17925 PF00890 FAD binding domain FY146_17925 PF02910 Fumarate reductase flavoprotein C-term FY146_17935 PF13407 Periplasmic binding protein domain FY146_17940 PF00005 ABC transporter FY146_17945 PF02653 Branched-chain amino acid transport system / permease component FY146_17960 PF00248 Aldo/keto reductase family FY146_17965 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY146_17965 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_17965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_17970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY146_17970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_17980 PF00296 Luciferase-like monooxygenase FY146_17985 PF02653 Branched-chain amino acid transport system / permease component FY146_17990 PF02653 Branched-chain amino acid transport system / permease component FY146_17995 PF00005 ABC transporter FY146_18005 PF00296 Luciferase-like monooxygenase FY146_18010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_18010 PF00005 ABC transporter FY146_18015 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_18015 PF00528 Binding-protein-dependent transport system inner membrane component FY146_18020 PF00528 Binding-protein-dependent transport system inner membrane component FY146_18025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_18030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_18035 PF00296 Luciferase-like monooxygenase FY146_18045 PF00296 Luciferase-like monooxygenase FY146_18050 PF00296 Luciferase-like monooxygenase FY146_18055 PF00291 Pyridoxal-phosphate dependent enzyme FY146_18080 PF13173 AAA domain FY146_18080 PF13635 Domain of unknown function (DUF4143) FY146_18090 PF01850 PIN domain FY146_18095 PF00701 Dihydrodipicolinate synthetase family FY146_18100 PF00155 Aminotransferase class I and II FY146_18110 PF05378 Hydantoinase/oxoprolinase N-terminal region FY146_18110 PF01968 Hydantoinase/oxoprolinase FY146_18115 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_18120 PF00528 Binding-protein-dependent transport system inner membrane component FY146_18125 PF00528 Binding-protein-dependent transport system inner membrane component FY146_18130 PF00005 ABC transporter FY146_18140 PF07729 FCD domain FY146_18140 PF00392 Bacterial regulatory proteins, gntR family FY146_18160 PF01047 MarR family FY146_18175 PF03466 LysR substrate binding domain FY146_18175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_18180 PF00106 short chain dehydrogenase FY146_18200 PF00171 Aldehyde dehydrogenase family FY146_18205 PF08240 Alcohol dehydrogenase GroES-like domain FY146_18205 PF00107 Zinc-binding dehydrogenase FY146_18210 PF03466 LysR substrate binding domain FY146_18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_18230 PF01810 LysE type translocator FY146_18235 PF13426 PAS domain FY146_18235 PF07536 HWE histidine kinase FY146_18235 PF13581 Histidine kinase-like ATPase domain FY146_18260 PF06628 Catalase-related immune-responsive FY146_18260 PF00199 Catalase FY146_18260 PF18011 C-terminal domain found in long catalases FY146_18280 PF00313 'Cold-shock' DNA-binding domain FY146_18310 PF08240 Alcohol dehydrogenase GroES-like domain FY146_18310 PF00107 Zinc-binding dehydrogenase FY146_18315 PF00561 alpha/beta hydrolase fold FY146_18320 PF00106 short chain dehydrogenase FY146_18325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY146_18330 PF00106 short chain dehydrogenase FY146_18335 PF00440 Bacterial regulatory proteins, tetR family FY146_18350 PF01810 LysE type translocator FY146_18360 PF02525 Flavodoxin-like fold FY146_18405 PF01464 Transglycosylase SLT domain FY146_18405 PF01551 Peptidase family M23 FY146_18405 PF10145 Phage-related minor tail protein FY146_18410 PF07724 AAA domain (Cdc48 subfamily) FY146_18410 PF17871 AAA lid domain FY146_18410 PF02861 Clp amino terminal domain, pathogenicity island component FY146_18410 PF10431 C-terminal, D2-small domain, of ClpB protein FY146_18410 PF00004 ATPase family associated with various cellular activities (AAA) FY146_18420 PF05175 Methyltransferase small domain FY146_18420 PF17827 PrmC N-terminal domain FY146_18425 PF03462 PCRF domain FY146_18425 PF00472 RF-1 domain FY146_18430 PF02896 PEP-utilising enzyme, TIM barrel domain FY146_18430 PF00391 PEP-utilising enzyme, mobile domain FY146_18430 PF05524 PEP-utilising enzyme, N-terminal FY146_18430 PF01590 GAF domain FY146_18435 PF13840 ACT domain FY146_18435 PF01842 ACT domain FY146_18435 PF00696 Amino acid kinase family FY146_18440 PF00270 DEAD/DEAH box helicase FY146_18440 PF00271 Helicase conserved C-terminal domain FY146_18445 PF03435 Saccharopine dehydrogenase NADP binding domain FY146_18445 PF16653 Saccharopine dehydrogenase C-terminal domain FY146_18450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY146_18465 PF16363 GDP-mannose 4,6 dehydratase FY146_18475 PF07536 HWE histidine kinase FY146_18475 PF13426 PAS domain FY146_18480 PF13426 PAS domain FY146_18480 PF08447 PAS fold FY146_18480 PF07536 HWE histidine kinase FY146_18485 PF00072 Response regulator receiver domain FY146_18495 PF04542 Sigma-70 region 2 FY146_18495 PF08281 Sigma-70, region 4 FY146_18500 PF01037 Lrp/AsnC ligand binding domain FY146_18505 PF00171 Aldehyde dehydrogenase family FY146_18505 PF01619 Proline dehydrogenase FY146_18505 PF14850 DNA-binding domain of Proline dehydrogenase FY146_18505 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY146_18510 PF00005 ABC transporter FY146_18515 PF00528 Binding-protein-dependent transport system inner membrane component FY146_18520 PF09084 NMT1/THI5 like FY146_18525 PF00171 Aldehyde dehydrogenase family FY146_18530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_18530 PF03466 LysR substrate binding domain FY146_18535 PF13409 Glutathione S-transferase, N-terminal domain FY146_18550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY146_18550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY146_18550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY146_18555 PF16363 GDP-mannose 4,6 dehydratase FY146_18560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY146_18560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY146_18580 PF01965 DJ-1/PfpI family FY146_18600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY146_18600 PF01266 FAD dependent oxidoreductase FY146_18610 PF05974 Domain of unknown function (DUF892) FY146_18615 PF01011 PQQ enzyme repeat FY146_18635 PF13193 AMP-binding enzyme C-terminal domain FY146_18635 PF00501 AMP-binding enzyme FY146_18640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY146_18640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY146_18645 PF00732 GMC oxidoreductase FY146_18645 PF05199 GMC oxidoreductase FY146_18650 PF02653 Branched-chain amino acid transport system / permease component FY146_18650 PF11862 Domain of unknown function (DUF3382) FY146_18655 PF02653 Branched-chain amino acid transport system / permease component FY146_18660 PF00005 ABC transporter FY146_18665 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_18665 PF00005 ABC transporter FY146_18680 PF00296 Luciferase-like monooxygenase FY146_18685 PF13378 Enolase C-terminal domain-like FY146_18685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_18690 PF07729 FCD domain FY146_18690 PF00392 Bacterial regulatory proteins, gntR family FY146_18695 PF01232 Mannitol dehydrogenase Rossmann domain FY146_18695 PF08125 Mannitol dehydrogenase C-terminal domain FY146_18700 PF00005 ABC transporter FY146_18700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_18705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_18705 PF00005 ABC transporter FY146_18710 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_18710 PF00528 Binding-protein-dependent transport system inner membrane component FY146_18715 PF00528 Binding-protein-dependent transport system inner membrane component FY146_18720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_18725 PF00557 Metallopeptidase family M24 FY146_18725 PF01321 Creatinase/Prolidase N-terminal domain FY146_18730 PF00106 short chain dehydrogenase FY146_18760 PF00575 S1 RNA binding domain FY146_18765 PF02224 Cytidylate kinase FY146_18795 PF02445 Quinolinate synthetase A protein FY146_18800 PF00890 FAD binding domain FY146_18800 PF02910 Fumarate reductase flavoprotein C-term FY146_18805 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY146_18805 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY146_18825 PF08173 Membrane bound YbgT-like protein FY146_18830 PF02322 Cytochrome bd terminal oxidase subunit II FY146_18835 PF01654 Cytochrome bd terminal oxidase subunit I FY146_18840 PF00005 ABC transporter FY146_18840 PF00664 ABC transporter transmembrane region FY146_18845 PF00664 ABC transporter transmembrane region FY146_18845 PF00005 ABC transporter FY146_18855 PF08240 Alcohol dehydrogenase GroES-like domain FY146_18855 PF00107 Zinc-binding dehydrogenase FY146_18865 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY146_18865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY146_18875 PF01037 Lrp/AsnC ligand binding domain FY146_18880 PF01177 Asp/Glu/Hydantoin racemase FY146_18895 PF00343 Carbohydrate phosphorylase FY146_18900 PF02806 Alpha amylase, C-terminal all-beta domain FY146_18900 PF00128 Alpha amylase, catalytic domain FY146_18900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY146_18905 PF00483 Nucleotidyl transferase FY146_18910 PF08323 Starch synthase catalytic domain FY146_18910 PF00534 Glycosyl transferases group 1 FY146_18915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY146_18915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY146_18915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY146_18915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY146_18920 PF18390 Glycogen debranching enzyme C-terminal domain FY146_18920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY146_18920 PF00128 Alpha amylase, catalytic domain FY146_18925 PF01575 MaoC like domain FY146_18950 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY146_18950 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_18950 PF01571 Aminomethyltransferase folate-binding domain FY146_18950 PF17806 Sarcosine oxidase A3 domain FY146_18965 PF01266 FAD dependent oxidoreductase FY146_18970 PF01165 Ribosomal protein S21 FY146_18985 PF11089 Exopolysaccharide production repressor FY146_18990 PF00535 Glycosyl transferase family 2 FY146_18995 PF04230 Polysaccharide pyruvyl transferase FY146_19000 PF00535 Glycosyl transferase family 2 FY146_19005 PF01943 Polysaccharide biosynthesis protein FY146_19010 PF01757 Acyltransferase family FY146_19015 PF00722 Glycosyl hydrolases family 16 FY146_19025 PF00535 Glycosyl transferase family 2 FY146_19030 PF00535 Glycosyl transferase family 2 FY146_19035 PF00535 Glycosyl transferase family 2 FY146_19040 PF00483 Nucleotidyl transferase FY146_19045 PF13807 G-rich domain on putative tyrosine kinase FY146_19045 PF02706 Chain length determinant protein FY146_19045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY146_19050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_19055 PF13426 PAS domain FY146_19055 PF00072 Response regulator receiver domain FY146_19055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_19070 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19075 PF00571 CBS domain FY146_19075 PF00005 ABC transporter FY146_19080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_19080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY146_19085 PF01205 Uncharacterized protein family UPF0029 FY146_19090 PF00849 RNA pseudouridylate synthase FY146_19095 PF04445 Putative SAM-dependent methyltransferase FY146_19105 PF07995 Glucose / Sorbosone dehydrogenase FY146_19115 PF00072 Response regulator receiver domain FY146_19115 PF00196 Bacterial regulatory proteins, luxR family FY146_19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_19120 PF07730 Histidine kinase FY146_19125 PF13407 Periplasmic binding protein domain FY146_19130 PF00005 ABC transporter FY146_19135 PF02653 Branched-chain amino acid transport system / permease component FY146_19145 PF08450 SMP-30/Gluconolactonase/LRE-like region FY146_19150 PF02631 RecX family FY146_19155 PF00034 Cytochrome c FY146_19165 PF00005 ABC transporter FY146_19170 PF01032 FecCD transport family FY146_19180 PF00593 TonB dependent receptor FY146_19180 PF07715 TonB-dependent Receptor Plug Domain FY146_19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_19185 PF03466 LysR substrate binding domain FY146_19195 PF00884 Sulfatase FY146_19195 PF08019 Phosphoethanolamine transferase EptA/EptB FY146_19200 PF00072 Response regulator receiver domain FY146_19200 PF00486 Transcriptional regulatory protein, C terminal FY146_19205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_19205 PF00512 His Kinase A (phospho-acceptor) domain FY146_19210 PF00083 Sugar (and other) transporter FY146_19215 PF07756 Protein of unknown function (DUF1612) FY146_19215 PF11972 HTH DNA binding domain FY146_19225 PF00672 HAMP domain FY146_19225 PF00211 Adenylate and Guanylate cyclase catalytic domain FY146_19235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_19235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_19240 PF00892 EamA-like transporter family FY146_19250 PF00491 Arginase family FY146_19265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY146_19265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY146_19270 PF00202 Aminotransferase class-III FY146_19280 PF00155 Aminotransferase class I and II FY146_19285 PF06968 Biotin and Thiamin Synthesis associated domain FY146_19285 PF04055 Radical SAM superfamily FY146_19290 PF13673 Acetyltransferase (GNAT) domain FY146_19335 PF01569 PAP2 superfamily FY146_19340 PF00486 Transcriptional regulatory protein, C terminal FY146_19340 PF00072 Response regulator receiver domain FY146_19345 PF00512 His Kinase A (phospho-acceptor) domain FY146_19345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_19345 PF00672 HAMP domain FY146_19355 PF07690 Major Facilitator Superfamily FY146_19360 PF03466 LysR substrate binding domain FY146_19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_19380 PF07969 Amidohydrolase family FY146_19395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_19400 PF03466 LysR substrate binding domain FY146_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_19405 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY146_19415 PF07690 Major Facilitator Superfamily FY146_19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_19420 PF03466 LysR substrate binding domain FY146_19430 PF00535 Glycosyl transferase family 2 FY146_19440 PF03275 UDP-galactopyranose mutase FY146_19450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_19450 PF00672 HAMP domain FY146_19465 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19470 PF00005 ABC transporter FY146_19480 PF04303 PrpF protein FY146_19485 PF03466 LysR substrate binding domain FY146_19485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_19490 PF01047 MarR family FY146_19520 PF00440 Bacterial regulatory proteins, tetR family FY146_19525 PF02311 AraC-like ligand binding domain FY146_19525 PF12833 Helix-turn-helix domain FY146_19540 PF13533 Biotin-lipoyl like FY146_19555 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19560 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_19570 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19575 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19575 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_19580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_19580 PF00005 ABC transporter FY146_19620 PF01979 Amidohydrolase family FY146_19625 PF01979 Amidohydrolase family FY146_19630 PF00221 Aromatic amino acid lyase FY146_19640 PF17392 Urocanase C-terminal domain FY146_19640 PF17391 Urocanase N-terminal domain FY146_19640 PF01175 Urocanase Rossmann-like domain FY146_19645 PF05962 HutD FY146_19650 PF07171 MlrC C-terminus FY146_19650 PF07364 Metallopeptidase family M81 FY146_19655 PF14031 Putative serine dehydratase domain FY146_19655 PF01168 Alanine racemase, N-terminal domain FY146_19660 PF01042 Endoribonuclease L-PSP FY146_19670 PF13614 AAA domain FY146_19675 PF02195 ParB-like nuclease domain FY146_19675 PF07506 RepB plasmid partitioning protein FY146_19680 PF03428 Replication protein C N-terminal domain FY146_19680 PF11800 Replication protein C C-terminal region FY146_19695 PF06772 Bacterial low temperature requirement A protein (LtrA) FY146_19700 PF02885 Glycosyl transferase family, helical bundle domain FY146_19700 PF00591 Glycosyl transferase family, a/b domain FY146_19705 PF00593 TonB dependent receptor FY146_19705 PF07715 TonB-dependent Receptor Plug Domain FY146_19710 PF00376 MerR family regulatory protein FY146_19710 PF09278 MerR, DNA binding FY146_19715 PF00128 Alpha amylase, catalytic domain FY146_19715 PF02806 Alpha amylase, C-terminal all-beta domain FY146_19720 PF00289 Biotin carboxylase, N-terminal domain FY146_19720 PF00364 Biotin-requiring enzyme FY146_19720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_19720 PF02785 Biotin carboxylase C-terminal domain FY146_19725 PF02682 Carboxyltransferase domain, subdomain C and D FY146_19730 PF07286 Protein of unknown function (DUF1445) FY146_19735 PF03746 LamB/YcsF family FY146_19740 PF01566 Natural resistance-associated macrophage protein FY146_19745 PF07729 FCD domain FY146_19745 PF00392 Bacterial regulatory proteins, gntR family FY146_19750 PF03861 ANTAR domain FY146_19750 PF08376 Nitrate and nitrite sensing FY146_19765 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19770 PF00005 ABC transporter FY146_19775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY146_19775 PF04324 BFD-like [2Fe-2S] binding domain FY146_19775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY146_19775 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY146_19775 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_19785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY146_19785 PF00384 Molybdopterin oxidoreductase FY146_19785 PF01568 Molydopterin dinucleotide binding domain FY146_19785 PF04324 BFD-like [2Fe-2S] binding domain FY146_19790 PF14824 Sirohaem biosynthesis protein central FY146_19790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY146_19790 PF10414 Sirohaem synthase dimerisation region FY146_19795 PF00455 DeoR C terminal sensor domain FY146_19795 PF08220 DeoR-like helix-turn-helix domain FY146_19800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY146_19800 PF01266 FAD dependent oxidoreductase FY146_19805 PF00005 ABC transporter FY146_19805 PF17912 MalK OB fold domain FY146_19810 PF00005 ABC transporter FY146_19810 PF17912 MalK OB fold domain FY146_19815 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19820 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY146_19835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY146_19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_19840 PF03466 LysR substrate binding domain FY146_19845 PF13593 SBF-like CPA transporter family (DUF4137) FY146_19850 PF00011 Hsp20/alpha crystallin family FY146_19865 PF00459 Inositol monophosphatase family FY146_19875 PF00072 Response regulator receiver domain FY146_19895 PF13407 Periplasmic binding protein domain FY146_19900 PF00005 ABC transporter FY146_19905 PF02653 Branched-chain amino acid transport system / permease component FY146_19915 PF00248 Aldo/keto reductase family FY146_19920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY146_19920 PF01266 FAD dependent oxidoreductase FY146_19925 PF01791 DeoC/LacD family aldolase FY146_19930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY146_19930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY146_19935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_19935 PF00672 HAMP domain FY146_19940 PF03466 LysR substrate binding domain FY146_19940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_19945 PF00106 short chain dehydrogenase FY146_19945 PF00300 Histidine phosphatase superfamily (branch 1) FY146_19950 PF00155 Aminotransferase class I and II FY146_19955 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19960 PF00528 Binding-protein-dependent transport system inner membrane component FY146_19970 PF00005 ABC transporter FY146_19970 PF08402 TOBE domain FY146_19975 PF03746 LamB/YcsF family FY146_19980 PF02626 Carboxyltransferase domain, subdomain A and B FY146_19985 PF02682 Carboxyltransferase domain, subdomain C and D FY146_19995 PF02785 Biotin carboxylase C-terminal domain FY146_19995 PF00289 Biotin carboxylase, N-terminal domain FY146_19995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_20000 PF00364 Biotin-requiring enzyme FY146_20005 PF00892 EamA-like transporter family FY146_20010 PF00892 EamA-like transporter family FY146_20015 PF03466 LysR substrate binding domain FY146_20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_20020 PF03401 Tripartite tricarboxylate transporter family receptor FY146_20025 PF03737 Aldolase/RraA FY146_20035 PF01970 Tripartite tricarboxylate transporter TctA family FY146_20040 PF01370 NAD dependent epimerase/dehydratase family FY146_20050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_20050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_20055 PF00106 short chain dehydrogenase FY146_20060 PF00528 Binding-protein-dependent transport system inner membrane component FY146_20065 PF00528 Binding-protein-dependent transport system inner membrane component FY146_20070 PF00005 ABC transporter FY146_20075 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_20080 PF03737 Aldolase/RraA FY146_20085 PF00107 Zinc-binding dehydrogenase FY146_20085 PF08240 Alcohol dehydrogenase GroES-like domain FY146_20100 PF01070 FMN-dependent dehydrogenase FY146_20105 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY146_20105 PF00132 Bacterial transferase hexapeptide (six repeats) FY146_20105 PF14602 Hexapeptide repeat of succinyl-transferase FY146_20115 PF01547 Bacterial extracellular solute-binding protein FY146_20125 PF03459 TOBE domain FY146_20125 PF00005 ABC transporter FY146_20125 PF17912 MalK OB fold domain FY146_20130 PF07470 Glycosyl Hydrolase Family 88 FY146_20135 PF00528 Binding-protein-dependent transport system inner membrane component FY146_20140 PF00528 Binding-protein-dependent transport system inner membrane component FY146_20155 PF00392 Bacterial regulatory proteins, gntR family FY146_20155 PF07729 FCD domain FY146_20160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_20160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_20165 PF00005 ABC transporter FY146_20165 PF12848 ABC transporter FY146_20175 PF01841 Transglutaminase-like superfamily FY146_20175 PF08379 Bacterial transglutaminase-like N-terminal region FY146_20180 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY146_20180 PF14403 Circularly permuted ATP-grasp type 2 FY146_20200 PF03061 Thioesterase superfamily FY146_20215 PF07729 FCD domain FY146_20215 PF00392 Bacterial regulatory proteins, gntR family FY146_20220 PF00465 Iron-containing alcohol dehydrogenase FY146_20225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY146_20235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_20240 PF00528 Binding-protein-dependent transport system inner membrane component FY146_20245 PF00528 Binding-protein-dependent transport system inner membrane component FY146_20245 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_20250 PF00005 ABC transporter FY146_20250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_20255 PF00701 Dihydrodipicolinate synthetase family FY146_20290 PF00145 C-5 cytosine-specific DNA methylase FY146_20300 PF02796 Helix-turn-helix domain of resolvase FY146_20300 PF00239 Resolvase, N terminal domain FY146_20320 PF01261 Xylose isomerase-like TIM barrel FY146_20325 PF01261 Xylose isomerase-like TIM barrel FY146_20330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_20330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_20335 PF01261 Xylose isomerase-like TIM barrel FY146_20340 PF00005 ABC transporter FY146_20345 PF02653 Branched-chain amino acid transport system / permease component FY146_20355 PF00356 Bacterial regulatory proteins, lacI family FY146_20360 PF00221 Aromatic amino acid lyase FY146_20365 PF00571 CBS domain FY146_20365 PF00005 ABC transporter FY146_20370 PF00528 Binding-protein-dependent transport system inner membrane component FY146_20385 PF07702 UTRA domain FY146_20385 PF00392 Bacterial regulatory proteins, gntR family FY146_20395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_20395 PF00529 HlyD membrane-fusion protein of T1SS FY146_20405 PF00873 AcrB/AcrD/AcrF family FY146_20410 PF00392 Bacterial regulatory proteins, gntR family FY146_20410 PF07729 FCD domain FY146_20415 PF00206 Lyase FY146_20415 PF10415 Fumarase C C-terminus FY146_20420 PF00324 Amino acid permease FY146_20425 PF17763 Glutaminase/Asparaginase C-terminal domain FY146_20425 PF00710 Asparaginase, N-terminal FY146_20435 PF03814 Potassium-transporting ATPase A subunit FY146_20445 PF02669 K+-transporting ATPase, c chain FY146_20450 PF13493 Domain of unknown function (DUF4118) FY146_20450 PF13492 GAF domain FY146_20450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_20450 PF00512 His Kinase A (phospho-acceptor) domain FY146_20450 PF02702 Osmosensitive K+ channel His kinase sensor domain FY146_20455 PF00072 Response regulator receiver domain FY146_20455 PF00486 Transcriptional regulatory protein, C terminal FY146_20460 PF01212 Beta-eliminating lyase FY146_20465 PF00310 Glutamine amidotransferases class-II FY146_20465 PF01645 Conserved region in glutamate synthase FY146_20465 PF04898 Glutamate synthase central domain FY146_20465 PF01493 GXGXG motif FY146_20475 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_20475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY146_20480 PF00512 His Kinase A (phospho-acceptor) domain FY146_20480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_20480 PF00672 HAMP domain FY146_20485 PF00072 Response regulator receiver domain FY146_20485 PF00486 Transcriptional regulatory protein, C terminal FY146_20495 PF13406 Transglycosylase SLT domain FY146_20500 PF00483 Nucleotidyl transferase FY146_20515 PF01380 SIS domain FY146_20515 PF00571 CBS domain FY146_20525 PF16200 C-terminal region of band_7 FY146_20525 PF01145 SPFH domain / Band 7 family FY146_20530 PF00762 Ferrochelatase FY146_20535 PF00149 Calcineurin-like phosphoesterase FY146_20535 PF02872 5'-nucleotidase, C-terminal domain FY146_20545 PF03435 Saccharopine dehydrogenase NADP binding domain FY146_20545 PF16653 Saccharopine dehydrogenase C-terminal domain FY146_20550 PF00990 Diguanylate cyclase, GGDEF domain FY146_20555 PF01063 Amino-transferase class IV FY146_20560 PF01432 Peptidase family M3 FY146_20560 PF08439 Oligopeptidase F FY146_20565 PF02954 Bacterial regulatory protein, Fis family FY146_20565 PF00072 Response regulator receiver domain FY146_20565 PF00158 Sigma-54 interaction domain FY146_20570 PF05951 Bacterial protein of unknown function (DUF882) FY146_20575 PF00224 Pyruvate kinase, barrel domain FY146_20575 PF02887 Pyruvate kinase, alpha/beta domain FY146_20595 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY146_20605 PF00444 Ribosomal protein L36 FY146_20610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY146_20610 PF02222 ATP-grasp domain FY146_20615 PF00731 AIR carboxylase FY146_20645 PF00459 Inositol monophosphatase family FY146_20655 PF01389 OmpA-like transmembrane domain FY146_20655 PF00691 OmpA family FY146_20660 PF00890 FAD binding domain FY146_20665 PF00005 ABC transporter FY146_20665 PF00664 ABC transporter transmembrane region FY146_20670 PF01197 Ribosomal protein L31 FY146_20690 PF00274 Fructose-bisphosphate aldolase class-I FY146_20695 PF00162 Phosphoglycerate kinase FY146_20700 PF00999 Sodium/hydrogen exchanger family FY146_20700 PF03471 Transporter associated domain FY146_20710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY146_20710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY146_20715 PF02779 Transketolase, pyrimidine binding domain FY146_20715 PF02780 Transketolase, C-terminal domain FY146_20715 PF00456 Transketolase, thiamine diphosphate binding domain FY146_20735 PF00571 CBS domain FY146_20735 PF03471 Transporter associated domain FY146_20735 PF01595 Cyclin M transmembrane N-terminal domain FY146_20745 PF13277 YmdB-like protein FY146_20760 PF01709 Transcriptional regulator FY146_20765 PF00296 Luciferase-like monooxygenase FY146_20770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_20770 PF00672 HAMP domain FY146_20775 PF02075 Crossover junction endodeoxyribonuclease RuvC FY146_20780 PF07499 RuvA, C-terminal domain FY146_20780 PF01330 RuvA N terminal domain FY146_20785 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY146_20785 PF17864 RuvB AAA lid domain FY146_20785 PF05491 RuvB C-terminal winged helix domain FY146_20800 PF00293 NUDIX domain FY146_20805 PF00293 NUDIX domain FY146_20810 PF03061 Thioesterase superfamily FY146_20815 PF01618 MotA/TolQ/ExbB proton channel family FY146_20820 PF02472 Biopolymer transport protein ExbD/TolR FY146_20830 PF04052 TolB amino-terminal domain FY146_20830 PF07676 WD40-like Beta Propeller Repeat FY146_20835 PF00691 OmpA family FY146_20845 PF01171 PP-loop family FY146_20850 PF01434 Peptidase family M41 FY146_20850 PF06480 FtsH Extracellular FY146_20850 PF17862 AAA+ lid domain FY146_20850 PF00004 ATPase family associated with various cellular activities (AAA) FY146_20855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY146_20855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY146_20855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY146_20855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY146_20860 PF13505 Outer membrane protein beta-barrel domain FY146_20870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_20870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_20870 PF01842 ACT domain FY146_20905 PF00085 Thioredoxin FY146_20915 PF03966 Trm112p-like protein FY146_20920 PF07678 A-macroglobulin TED domain FY146_20920 PF17962 Bacterial macroglobulin domain 6 FY146_20920 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY146_20920 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY146_20920 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY146_20920 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY146_20920 PF07703 Alpha-2-macroglobulin bait region domain FY146_20920 PF00207 Alpha-2-macroglobulin family FY146_20920 PF01835 MG2 domain FY146_20925 PF00912 Transglycosylase FY146_20925 PF00905 Penicillin binding protein transpeptidase domain FY146_20925 PF06832 Penicillin-Binding Protein C-terminus Family FY146_20935 PF07687 Peptidase dimerisation domain FY146_20935 PF01546 Peptidase family M20/M25/M40 FY146_20940 PF00768 D-alanyl-D-alanine carboxypeptidase FY146_20940 PF07943 Penicillin-binding protein 5, C-terminal domain FY146_20945 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY146_20945 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY146_20950 PF01206 Sulfurtransferase TusA FY146_20950 PF00581 Rhodanese-like domain FY146_20955 PF03734 L,D-transpeptidase catalytic domain FY146_20960 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY146_20965 PF02899 Phage integrase, N-terminal SAM-like domain FY146_20965 PF00589 Phage integrase family FY146_20975 PF01202 Shikimate kinase FY146_20980 PF01761 3-dehydroquinate synthase FY146_20990 PF01722 BolA-like protein FY146_20995 PF00226 DnaJ domain FY146_21000 PF08406 CbbQ/NirQ/NorQ C-terminal FY146_21000 PF12556 Cobaltochelatase CobS subunit N terminal FY146_21000 PF07728 AAA domain (dynein-related subfamily) FY146_21005 PF06213 Cobalamin biosynthesis protein CobT FY146_21005 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY146_21020 PF02592 Putative vitamin uptake transporter FY146_21025 PF00830 Ribosomal L28 family FY146_21045 PF00753 Metallo-beta-lactamase superfamily FY146_21045 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY146_21050 PF01209 ubiE/COQ5 methyltransferase family FY146_21055 PF00155 Aminotransferase class I and II FY146_21060 PF02153 Prephenate dehydrogenase FY146_21070 PF04752 ChaC-like protein FY146_21090 PF00005 ABC transporter FY146_21100 PF00156 Phosphoribosyl transferase domain FY146_21105 PF00072 Response regulator receiver domain FY146_21115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY146_21115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY146_21125 PF00206 Lyase FY146_21125 PF14698 Argininosuccinate lyase C-terminal FY146_21130 PF08534 Redoxin FY146_21140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY146_21140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY146_21145 PF01012 Electron transfer flavoprotein domain FY146_21145 PF00766 Electron transfer flavoprotein FAD-binding domain FY146_21150 PF01012 Electron transfer flavoprotein domain FY146_21160 PF01923 Cobalamin adenosyltransferase FY146_21170 PF00106 short chain dehydrogenase FY146_21180 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY146_21185 PF12833 Helix-turn-helix domain FY146_21185 PF00730 HhH-GPD superfamily base excision DNA repair protein FY146_21185 PF06029 AlkA N-terminal domain FY146_21185 PF02805 Metal binding domain of Ada FY146_21190 PF06114 IrrE N-terminal-like domain FY146_21190 PF09856 Predicted transcriptional regulator (DUF2083) FY146_21190 PF01381 Helix-turn-helix FY146_21195 PF01039 Carboxyl transferase domain FY146_21200 PF02798 Glutathione S-transferase, N-terminal domain FY146_21215 PF00364 Biotin-requiring enzyme FY146_21215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_21215 PF02785 Biotin carboxylase C-terminal domain FY146_21215 PF00289 Biotin carboxylase, N-terminal domain FY146_21215 PF18140 Propionyl-coenzyme A carboxylase BT domain FY146_21220 PF02310 B12 binding domain FY146_21220 PF01642 Methylmalonyl-CoA mutase FY146_21230 PF01266 FAD dependent oxidoreductase FY146_21230 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY146_21240 PF13407 Periplasmic binding protein domain FY146_21245 PF02653 Branched-chain amino acid transport system / permease component FY146_21250 PF00005 ABC transporter FY146_21255 PF01717 Cobalamin-independent synthase, Catalytic domain FY146_21255 PF08267 Cobalamin-independent synthase, N-terminal domain FY146_21265 PF01381 Helix-turn-helix FY146_21280 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY146_21305 PF01047 MarR family FY146_21305 PF00480 ROK family FY146_21315 PF00528 Binding-protein-dependent transport system inner membrane component FY146_21320 PF00528 Binding-protein-dependent transport system inner membrane component FY146_21325 PF00005 ABC transporter FY146_21325 PF03459 TOBE domain FY146_21325 PF17912 MalK OB fold domain FY146_21330 PF03009 Glycerophosphoryl diester phosphodiesterase family FY146_21340 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY146_21340 PF00722 Glycosyl hydrolases family 16 FY146_21345 PF01272 Transcription elongation factor, GreA/GreB, C-term FY146_21345 PF03449 Transcription elongation factor, N-terminal FY146_21360 PF13439 Glycosyltransferase Family 4 FY146_21360 PF00534 Glycosyl transferases group 1 FY146_21365 PF13439 Glycosyltransferase Family 4 FY146_21365 PF00534 Glycosyl transferases group 1 FY146_21385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY146_21385 PF13807 G-rich domain on putative tyrosine kinase FY146_21385 PF02706 Chain length determinant protein FY146_21395 PF01757 Acyltransferase family FY146_21410 PF01943 Polysaccharide biosynthesis protein FY146_21470 PF01757 Acyltransferase family FY146_21475 PF00892 EamA-like transporter family FY146_21480 PF02810 SEC-C motif FY146_21480 PF07517 SecA DEAD-like domain FY146_21480 PF01043 SecA preprotein cross-linking domain FY146_21480 PF07516 SecA Wing and Scaffold domain FY146_21490 PF01960 ArgJ family FY146_21495 PF00583 Acetyltransferase (GNAT) family FY146_21495 PF13508 Acetyltransferase (GNAT) domain FY146_21500 PF00293 NUDIX domain FY146_21515 PF08241 Methyltransferase domain FY146_21525 PF00462 Glutaredoxin FY146_21530 PF00795 Carbon-nitrogen hydrolase FY146_21540 PF08241 Methyltransferase domain FY146_21555 PF00378 Enoyl-CoA hydratase/isomerase FY146_21565 PF00528 Binding-protein-dependent transport system inner membrane component FY146_21570 PF00528 Binding-protein-dependent transport system inner membrane component FY146_21575 PF00005 ABC transporter FY146_21580 PF08713 DNA alkylation repair enzyme FY146_21585 PF00171 Aldehyde dehydrogenase family FY146_21595 PF00990 Diguanylate cyclase, GGDEF domain FY146_21595 PF08447 PAS fold FY146_21595 PF08448 PAS fold FY146_21595 PF00563 EAL domain FY146_21605 PF00561 alpha/beta hydrolase fold FY146_21615 PF05336 L-rhamnose mutarotase FY146_21620 PF02653 Branched-chain amino acid transport system / permease component FY146_21625 PF02653 Branched-chain amino acid transport system / permease component FY146_21630 PF00005 ABC transporter FY146_21635 PF13407 Periplasmic binding protein domain FY146_21640 PF08220 DeoR-like helix-turn-helix domain FY146_21640 PF00455 DeoR C terminal sensor domain FY146_21645 PF00596 Class II Aldolase and Adducin N-terminal domain FY146_21650 PF01261 Xylose isomerase-like TIM barrel FY146_21655 PF02548 Ketopantoate hydroxymethyltransferase FY146_21660 PF02569 Pantoate-beta-alanine ligase FY146_21670 PF00682 HMGL-like FY146_21675 PF02785 Biotin carboxylase C-terminal domain FY146_21675 PF00289 Biotin carboxylase, N-terminal domain FY146_21675 PF00364 Biotin-requiring enzyme FY146_21675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_21680 PF01039 Carboxyl transferase domain FY146_21685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_21685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_21685 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_21690 PF01037 Lrp/AsnC ligand binding domain FY146_21695 PF02803 Thiolase, C-terminal domain FY146_21695 PF00108 Thiolase, N-terminal domain FY146_21700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_21700 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_21700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_21705 PF00676 Dehydrogenase E1 component FY146_21705 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY146_21710 PF02779 Transketolase, pyrimidine binding domain FY146_21710 PF02780 Transketolase, C-terminal domain FY146_21715 PF02817 e3 binding domain FY146_21715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY146_21715 PF00364 Biotin-requiring enzyme FY146_21720 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY146_21720 PF01676 Metalloenzyme superfamily FY146_21730 PF04143 Sulphur transport FY146_21740 PF04273 Putative phosphatase (DUF442) FY146_21740 PF00753 Metallo-beta-lactamase superfamily FY146_21750 PF00106 short chain dehydrogenase FY146_21755 PF00561 alpha/beta hydrolase fold FY146_21765 PF07729 FCD domain FY146_21765 PF00392 Bacterial regulatory proteins, gntR family FY146_21775 PF00528 Binding-protein-dependent transport system inner membrane component FY146_21780 PF00528 Binding-protein-dependent transport system inner membrane component FY146_21780 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_21785 PF00005 ABC transporter FY146_21785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_21790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_21790 PF00005 ABC transporter FY146_21920 PF04233 Phage Mu protein F like protein FY146_21925 PF06074 Protein of unknown function (DUF935) FY146_21930 PF03237 Terminase-like family FY146_22050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_22060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_22060 PF13378 Enolase C-terminal domain-like FY146_22065 PF00106 short chain dehydrogenase FY146_22070 PF01638 HxlR-like helix-turn-helix FY146_22080 PF00296 Luciferase-like monooxygenase FY146_22085 PF00296 Luciferase-like monooxygenase FY146_22095 PF05368 NmrA-like family FY146_22100 PF00296 Luciferase-like monooxygenase FY146_22105 PF01546 Peptidase family M20/M25/M40 FY146_22105 PF07687 Peptidase dimerisation domain FY146_22110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_22125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_22130 PF00296 Luciferase-like monooxygenase FY146_22135 PF03466 LysR substrate binding domain FY146_22135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_22145 PF00248 Aldo/keto reductase family FY146_22150 PF00005 ABC transporter FY146_22150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_22155 PF00005 ABC transporter FY146_22155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_22160 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22165 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_22180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_22180 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_22180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_22185 PF00296 Luciferase-like monooxygenase FY146_22195 PF00581 Rhodanese-like domain FY146_22210 PF00296 Luciferase-like monooxygenase FY146_22215 PF01613 Flavin reductase like domain FY146_22225 PF02082 Transcriptional regulator FY146_22230 PF00296 Luciferase-like monooxygenase FY146_22235 PF00296 Luciferase-like monooxygenase FY146_22240 PF07687 Peptidase dimerisation domain FY146_22240 PF01546 Peptidase family M20/M25/M40 FY146_22250 PF00005 ABC transporter FY146_22255 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_22265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_22265 PF03466 LysR substrate binding domain FY146_22275 PF04324 BFD-like [2Fe-2S] binding domain FY146_22275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_22280 PF01266 FAD dependent oxidoreductase FY146_22285 PF01266 FAD dependent oxidoreductase FY146_22290 PF01037 Lrp/AsnC ligand binding domain FY146_22295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_22295 PF00005 ABC transporter FY146_22300 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_22300 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22305 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_22320 PF00202 Aminotransferase class-III FY146_22335 PF01266 FAD dependent oxidoreductase FY146_22340 PF00171 Aldehyde dehydrogenase family FY146_22345 PF00180 Isocitrate/isopropylmalate dehydrogenase FY146_22350 PF00171 Aldehyde dehydrogenase family FY146_22360 PF05378 Hydantoinase/oxoprolinase N-terminal region FY146_22360 PF01968 Hydantoinase/oxoprolinase FY146_22375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_22380 PF07687 Peptidase dimerisation domain FY146_22380 PF01546 Peptidase family M20/M25/M40 FY146_22395 PF01032 FecCD transport family FY146_22400 PF00005 ABC transporter FY146_22405 PF00127 Copper binding proteins, plastocyanin/azurin family FY146_22410 PF01209 ubiE/COQ5 methyltransferase family FY146_22425 PF01032 FecCD transport family FY146_22430 PF00005 ABC transporter FY146_22435 PF04542 Sigma-70 region 2 FY146_22435 PF08281 Sigma-70, region 4 FY146_22435 PF12680 SnoaL-like domain FY146_22455 PF00664 ABC transporter transmembrane region FY146_22455 PF00005 ABC transporter FY146_22460 PF00529 HlyD membrane-fusion protein of T1SS FY146_22460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_22470 PF00392 Bacterial regulatory proteins, gntR family FY146_22470 PF07729 FCD domain FY146_22475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_22475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_22480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_22480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_22485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_22485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_22495 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22500 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22505 PF00005 ABC transporter FY146_22505 PF17912 MalK OB fold domain FY146_22505 PF03459 TOBE domain FY146_22510 PF00920 Dehydratase family FY146_22515 PF01370 NAD dependent epimerase/dehydratase family FY146_22520 PF03737 Aldolase/RraA FY146_22525 PF00072 Response regulator receiver domain FY146_22525 PF00196 Bacterial regulatory proteins, luxR family FY146_22530 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22535 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22535 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_22540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_22540 PF00005 ABC transporter FY146_22555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_22570 PF01112 Asparaginase FY146_22575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_22575 PF03466 LysR substrate binding domain FY146_22580 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22585 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_22585 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22590 PF00005 ABC transporter FY146_22590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_22600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_22605 PF01546 Peptidase family M20/M25/M40 FY146_22615 PF13407 Periplasmic binding protein domain FY146_22620 PF00005 ABC transporter FY146_22625 PF02653 Branched-chain amino acid transport system / permease component FY146_22630 PF07722 Peptidase C26 FY146_22635 PF03480 Bacterial extracellular solute-binding protein, family 7 FY146_22640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY146_22645 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY146_22660 PF01266 FAD dependent oxidoreductase FY146_22665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_22665 PF08447 PAS fold FY146_22665 PF13426 PAS domain FY146_22670 PF00296 Luciferase-like monooxygenase FY146_22675 PF03972 MmgE/PrpD family FY146_22680 PF00005 ABC transporter FY146_22685 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22690 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22695 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_22700 PF03949 Malic enzyme, NAD binding domain FY146_22700 PF00390 Malic enzyme, N-terminal domain FY146_22700 PF01515 Phosphate acetyl/butaryl transferase FY146_22705 PF03466 LysR substrate binding domain FY146_22705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_22710 PF01011 PQQ enzyme repeat FY146_22715 PF00483 Nucleotidyl transferase FY146_22715 PF01050 Mannose-6-phosphate isomerase FY146_22725 PF01547 Bacterial extracellular solute-binding protein FY146_22730 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22735 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22740 PF17912 MalK OB fold domain FY146_22740 PF00005 ABC transporter FY146_22750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_22750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_22755 PF06508 Queuosine biosynthesis protein QueC FY146_22760 PF01242 6-pyruvoyl tetrahydropterin synthase FY146_22765 PF04055 Radical SAM superfamily FY146_22770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_22770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_22780 PF03459 TOBE domain FY146_22780 PF00005 ABC transporter FY146_22780 PF17912 MalK OB fold domain FY146_22785 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22790 PF00528 Binding-protein-dependent transport system inner membrane component FY146_22795 PF01547 Bacterial extracellular solute-binding protein FY146_22800 PF00356 Bacterial regulatory proteins, lacI family FY146_22815 PF02245 Methylpurine-DNA glycosylase (MPG) FY146_22835 PF03734 L,D-transpeptidase catalytic domain FY146_22835 PF17969 L,D-transpeptidase C-terminal domain FY146_22840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_22840 PF00672 HAMP domain FY146_22845 PF00202 Aminotransferase class-III FY146_22855 PF02397 Bacterial sugar transferase FY146_22860 PF02563 Polysaccharide biosynthesis/export protein FY146_22875 PF00529 HlyD membrane-fusion protein of T1SS FY146_22880 PF00005 ABC transporter FY146_22880 PF00664 ABC transporter transmembrane region FY146_22895 PF00196 Bacterial regulatory proteins, luxR family FY146_22895 PF00072 Response regulator receiver domain FY146_22905 PF01370 NAD dependent epimerase/dehydratase family FY146_22910 PF16363 GDP-mannose 4,6 dehydratase FY146_22940 PF03552 Cellulose synthase FY146_22940 PF00535 Glycosyl transferase family 2 FY146_22940 PF07238 PilZ domain FY146_22950 PF01270 Glycosyl hydrolases family 8 FY146_22960 PF07687 Peptidase dimerisation domain FY146_22960 PF01546 Peptidase family M20/M25/M40 FY146_22975 PF00202 Aminotransferase class-III FY146_22980 PF00375 Sodium:dicarboxylate symporter family FY146_22985 PF00512 His Kinase A (phospho-acceptor) domain FY146_22985 PF02743 Cache domain FY146_22985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_22990 PF02954 Bacterial regulatory protein, Fis family FY146_22990 PF00158 Sigma-54 interaction domain FY146_22990 PF00072 Response regulator receiver domain FY146_23005 PF01266 FAD dependent oxidoreductase FY146_23010 PF01168 Alanine racemase, N-terminal domain FY146_23010 PF00842 Alanine racemase, C-terminal domain FY146_23015 PF01037 Lrp/AsnC ligand binding domain FY146_23020 PF08543 Phosphomethylpyrimidine kinase FY146_23025 PF02581 Thiamine monophosphate synthase FY146_23030 PF02110 Hydroxyethylthiazole kinase family FY146_23035 PF09084 NMT1/THI5 like FY146_23040 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23050 PF01055 Glycosyl hydrolases family 31 FY146_23055 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23060 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23065 PF01547 Bacterial extracellular solute-binding protein FY146_23070 PF00005 ABC transporter FY146_23070 PF08402 TOBE domain FY146_23075 PF00392 Bacterial regulatory proteins, gntR family FY146_23075 PF07702 UTRA domain FY146_23080 PF00296 Luciferase-like monooxygenase FY146_23085 PF00248 Aldo/keto reductase family FY146_23090 PF01613 Flavin reductase like domain FY146_23105 PF00873 AcrB/AcrD/AcrF family FY146_23110 PF13533 Biotin-lipoyl like FY146_23115 PF02563 Polysaccharide biosynthesis/export protein FY146_23120 PF00534 Glycosyl transferases group 1 FY146_23120 PF13439 Glycosyltransferase Family 4 FY146_23125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_23130 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23135 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_23135 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23140 PF01979 Amidohydrolase family FY146_23155 PF03841 L-seryl-tRNA selenium transferase FY146_23160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_23160 PF00005 ABC transporter FY146_23165 PF00043 Glutathione S-transferase, C-terminal domain FY146_23165 PF02798 Glutathione S-transferase, N-terminal domain FY146_23180 PF00296 Luciferase-like monooxygenase FY146_23185 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY146_23185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY146_23190 PF03480 Bacterial extracellular solute-binding protein, family 7 FY146_23200 PF00171 Aldehyde dehydrogenase family FY146_23210 PF03786 D-mannonate dehydratase (UxuA) FY146_23215 PF00107 Zinc-binding dehydrogenase FY146_23215 PF08240 Alcohol dehydrogenase GroES-like domain FY146_23220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY146_23230 PF03480 Bacterial extracellular solute-binding protein, family 7 FY146_23235 PF00392 Bacterial regulatory proteins, gntR family FY146_23235 PF07729 FCD domain FY146_23240 PF13419 Haloacid dehalogenase-like hydrolase FY146_23245 PF05209 Septum formation inhibitor MinC, N-terminal domain FY146_23245 PF03775 Septum formation inhibitor MinC, C-terminal domain FY146_23250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY146_23255 PF03776 Septum formation topological specificity factor MinE FY146_23260 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_23270 PF00563 EAL domain FY146_23270 PF00990 Diguanylate cyclase, GGDEF domain FY146_23270 PF08448 PAS fold FY146_23270 PF08447 PAS fold FY146_23275 PF01425 Amidase FY146_23285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_23295 PF01547 Bacterial extracellular solute-binding protein FY146_23300 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23305 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23310 PF00005 ABC transporter FY146_23310 PF17912 MalK OB fold domain FY146_23310 PF03459 TOBE domain FY146_23320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_23320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_23330 PF13660 Domain of unknown function (DUF4147) FY146_23330 PF05161 MOFRL family FY146_23350 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY146_23350 PF02811 PHP domain FY146_23350 PF01336 OB-fold nucleic acid binding domain FY146_23350 PF14579 Helix-hairpin-helix motif FY146_23350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY146_23355 PF13847 Methyltransferase domain FY146_23365 PF07690 Major Facilitator Superfamily FY146_23370 PF00392 Bacterial regulatory proteins, gntR family FY146_23370 PF07729 FCD domain FY146_23375 PF02653 Branched-chain amino acid transport system / permease component FY146_23380 PF02653 Branched-chain amino acid transport system / permease component FY146_23385 PF00005 ABC transporter FY146_23390 PF13407 Periplasmic binding protein domain FY146_23395 PF00920 Dehydratase family FY146_23405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_23410 PF12833 Helix-turn-helix domain FY146_23420 PF00266 Aminotransferase class-V FY146_23425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_23425 PF00005 ABC transporter FY146_23430 PF00005 ABC transporter FY146_23430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_23435 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23440 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_23450 PF09397 Ftsk gamma domain FY146_23450 PF01580 FtsK/SpoIIIE family FY146_23450 PF17854 FtsK alpha domain FY146_23450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY146_23455 PF02615 Malate/L-lactate dehydrogenase FY146_23460 PF00990 Diguanylate cyclase, GGDEF domain FY146_23460 PF08447 PAS fold FY146_23460 PF08448 PAS fold FY146_23460 PF00563 EAL domain FY146_23470 PF05899 Protein of unknown function (DUF861) FY146_23470 PF07883 Cupin domain FY146_23475 PF00990 Diguanylate cyclase, GGDEF domain FY146_23475 PF17151 Periplasmic sensor domain FY146_23480 PF00529 HlyD membrane-fusion protein of T1SS FY146_23480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_23485 PF00873 AcrB/AcrD/AcrF family FY146_23490 PF08361 MAATS-type transcriptional repressor, C-terminal region FY146_23490 PF00440 Bacterial regulatory proteins, tetR family FY146_23495 PF00005 ABC transporter FY146_23500 PF02653 Branched-chain amino acid transport system / permease component FY146_23505 PF13407 Periplasmic binding protein domain FY146_23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_23510 PF03466 LysR substrate binding domain FY146_23515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY146_23515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY146_23535 PF03922 OmpW family FY146_23545 PF00005 ABC transporter FY146_23545 PF08402 TOBE domain FY146_23550 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23555 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23560 PF13416 Bacterial extracellular solute-binding protein FY146_23565 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY146_23565 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY146_23580 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY146_23580 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY146_23585 PF00005 ABC transporter FY146_23590 PF00950 ABC 3 transport family FY146_23595 PF01297 Zinc-uptake complex component A periplasmic FY146_23600 PF00583 Acetyltransferase (GNAT) family FY146_23615 PF01053 Cys/Met metabolism PLP-dependent enzyme FY146_23620 PF01547 Bacterial extracellular solute-binding protein FY146_23625 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23630 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23635 PF00005 ABC transporter FY146_23635 PF17912 MalK OB fold domain FY146_23640 PF00005 ABC transporter FY146_23640 PF08402 TOBE domain FY146_23645 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23650 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23655 PF08013 Tagatose 6 phosphate kinase FY146_23660 PF00294 pfkB family carbohydrate kinase FY146_23675 PF16912 Glucose dehydrogenase C-terminus FY146_23675 PF08240 Alcohol dehydrogenase GroES-like domain FY146_23680 PF00356 Bacterial regulatory proteins, lacI family FY146_23685 PF07690 Major Facilitator Superfamily FY146_23690 PF12833 Helix-turn-helix domain FY146_23690 PF02311 AraC-like ligand binding domain FY146_23705 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23710 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23715 PF00005 ABC transporter FY146_23715 PF17912 MalK OB fold domain FY146_23720 PF00248 Aldo/keto reductase family FY146_23735 PF00392 Bacterial regulatory proteins, gntR family FY146_23735 PF07729 FCD domain FY146_23740 PF01370 NAD dependent epimerase/dehydratase family FY146_23745 PF04962 KduI/IolB family FY146_23755 PF00701 Dihydrodipicolinate synthetase family FY146_23760 PF13378 Enolase C-terminal domain-like FY146_23760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_23765 PF04909 Amidohydrolase FY146_23770 PF02311 AraC-like ligand binding domain FY146_23770 PF12833 Helix-turn-helix domain FY146_23775 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23780 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23785 PF08402 TOBE domain FY146_23785 PF00005 ABC transporter FY146_23795 PF00295 Glycosyl hydrolases family 28 FY146_23800 PF07470 Glycosyl Hydrolase Family 88 FY146_23805 PF00550 Phosphopantetheine attachment site FY146_23825 PF01165 Ribosomal protein S21 FY146_23835 PF00313 'Cold-shock' DNA-binding domain FY146_23840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_23840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_23855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_23855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_23860 PF17938 Tetracyclin repressor-like, C-terminal domain FY146_23860 PF00440 Bacterial regulatory proteins, tetR family FY146_23865 PF13416 Bacterial extracellular solute-binding protein FY146_23870 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23875 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23880 PF00005 ABC transporter FY146_23880 PF17912 MalK OB fold domain FY146_23880 PF03459 TOBE domain FY146_23885 PF01261 Xylose isomerase-like TIM barrel FY146_23890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_23890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_23890 PF01842 ACT domain FY146_23900 PF00356 Bacterial regulatory proteins, lacI family FY146_23915 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY146_23920 PF17912 MalK OB fold domain FY146_23920 PF00005 ABC transporter FY146_23930 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23935 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23940 PF00005 ABC transporter FY146_23945 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23950 PF09084 NMT1/THI5 like FY146_23955 PF00296 Luciferase-like monooxygenase FY146_23965 PF00005 ABC transporter FY146_23965 PF17912 MalK OB fold domain FY146_23970 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23975 PF00528 Binding-protein-dependent transport system inner membrane component FY146_23980 PF13416 Bacterial extracellular solute-binding protein FY146_23990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_23990 PF08447 PAS fold FY146_23990 PF13426 PAS domain FY146_24015 PF00005 ABC transporter FY146_24015 PF08402 TOBE domain FY146_24025 PF00528 Binding-protein-dependent transport system inner membrane component FY146_24030 PF00528 Binding-protein-dependent transport system inner membrane component FY146_24035 PF01177 Asp/Glu/Hydantoin racemase FY146_24075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_24075 PF03466 LysR substrate binding domain FY146_24080 PF00144 Beta-lactamase FY146_24090 PF00860 Permease family FY146_24100 PF07690 Major Facilitator Superfamily FY146_24105 PF00512 His Kinase A (phospho-acceptor) domain FY146_24105 PF16736 Single Cache-like FY146_24105 PF00989 PAS fold FY146_24105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_24110 PF00486 Transcriptional regulatory protein, C terminal FY146_24110 PF00072 Response regulator receiver domain FY146_24115 PF00529 HlyD membrane-fusion protein of T1SS FY146_24115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_24120 PF00873 AcrB/AcrD/AcrF family FY146_24125 PF13460 NAD(P)H-binding FY146_24135 PF01494 FAD binding domain FY146_24140 PF02308 MgtC family FY146_24150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY146_24155 PF00873 AcrB/AcrD/AcrF family FY146_24160 PF13520 Amino acid permease FY146_24165 PF13520 Amino acid permease FY146_24180 PF01594 AI-2E family transporter FY146_24205 PF01037 Lrp/AsnC ligand binding domain FY146_24230 PF13193 AMP-binding enzyme C-terminal domain FY146_24230 PF00501 AMP-binding enzyme FY146_24240 PF01614 Bacterial transcriptional regulator FY146_24240 PF09339 IclR helix-turn-helix domain FY146_24250 PF03480 Bacterial extracellular solute-binding protein, family 7 FY146_24250 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY146_24255 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY146_24260 PF04199 Putative cyclase FY146_24265 PF01494 FAD binding domain FY146_24280 PF00072 Response regulator receiver domain FY146_24280 PF00196 Bacterial regulatory proteins, luxR family FY146_24285 PF00196 Bacterial regulatory proteins, luxR family FY146_24285 PF00072 Response regulator receiver domain FY146_24290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_24290 PF08448 PAS fold FY146_24290 PF13426 PAS domain FY146_24290 PF00072 Response regulator receiver domain FY146_24290 PF00512 His Kinase A (phospho-acceptor) domain FY146_24295 PF00384 Molybdopterin oxidoreductase FY146_24300 PF00210 Ferritin-like domain FY146_24305 PF00561 alpha/beta hydrolase fold FY146_24315 PF06441 Epoxide hydrolase N terminus FY146_24320 PF00171 Aldehyde dehydrogenase family FY146_24325 PF02566 OsmC-like protein FY146_24330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_24330 PF00512 His Kinase A (phospho-acceptor) domain FY146_24330 PF00672 HAMP domain FY146_24335 PF00486 Transcriptional regulatory protein, C terminal FY146_24335 PF00072 Response regulator receiver domain FY146_24340 PF00561 alpha/beta hydrolase fold FY146_24350 PF17991 Thioredoxin like C-terminal domain FY146_24350 PF02683 Cytochrome C biogenesis protein transmembrane region FY146_24350 PF00578 AhpC/TSA family FY146_24360 PF07690 Major Facilitator Superfamily FY146_24365 PF00990 Diguanylate cyclase, GGDEF domain FY146_24375 PF00005 ABC transporter FY146_24375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_24385 PF00300 Histidine phosphatase superfamily (branch 1) FY146_24385 PF00106 short chain dehydrogenase FY146_24390 PF01266 FAD dependent oxidoreductase FY146_24395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_24400 PF00528 Binding-protein-dependent transport system inner membrane component FY146_24405 PF00528 Binding-protein-dependent transport system inner membrane component FY146_24405 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_24410 PF01266 FAD dependent oxidoreductase FY146_24420 PF13649 Methyltransferase domain FY146_24425 PF00999 Sodium/hydrogen exchanger family FY146_24430 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY146_24435 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY146_24440 PF00459 Inositol monophosphatase family FY146_24455 PF01546 Peptidase family M20/M25/M40 FY146_24460 PF08220 DeoR-like helix-turn-helix domain FY146_24460 PF00455 DeoR C terminal sensor domain FY146_24465 PF00005 ABC transporter FY146_24465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_24470 PF00528 Binding-protein-dependent transport system inner membrane component FY146_24470 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_24475 PF00528 Binding-protein-dependent transport system inner membrane component FY146_24480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_24485 PF00465 Iron-containing alcohol dehydrogenase FY146_24490 PF00795 Carbon-nitrogen hydrolase FY146_24495 PF09383 NIL domain FY146_24495 PF00005 ABC transporter FY146_24500 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_24500 PF00005 ABC transporter FY146_24505 PF02653 Branched-chain amino acid transport system / permease component FY146_24510 PF02653 Branched-chain amino acid transport system / permease component FY146_24515 PF13458 Periplasmic binding protein FY146_24535 PF00313 'Cold-shock' DNA-binding domain FY146_24565 PF13289 SIR2-like domain FY146_24575 PF00376 MerR family regulatory protein FY146_24575 PF13614 AAA domain FY146_24580 PF07506 RepB plasmid partitioning protein FY146_24580 PF02195 ParB-like nuclease domain FY146_24585 PF11800 Replication protein C C-terminal region FY146_24585 PF03428 Replication protein C N-terminal domain FY146_24595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_24595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_24600 PF00005 ABC transporter FY146_24605 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_24610 PF00356 Bacterial regulatory proteins, lacI family FY146_24645 PF00487 Fatty acid desaturase FY146_24655 PF00313 'Cold-shock' DNA-binding domain FY146_24690 PF07517 SecA DEAD-like domain FY146_24690 PF02810 SEC-C motif FY146_24690 PF01043 SecA preprotein cross-linking domain FY146_24690 PF07516 SecA Wing and Scaffold domain FY146_24730 PF13091 PLD-like domain FY146_24730 PF13087 AAA domain FY146_24765 PF00989 PAS fold FY146_24765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_24765 PF00512 His Kinase A (phospho-acceptor) domain FY146_24770 PF00664 ABC transporter transmembrane region FY146_24770 PF00005 ABC transporter FY146_24780 PF01022 Bacterial regulatory protein, arsR family FY146_24810 PF01965 DJ-1/PfpI family FY146_24810 PF12833 Helix-turn-helix domain FY146_24815 PF07690 Major Facilitator Superfamily FY146_24820 PF07690 Major Facilitator Superfamily FY146_24825 PF01047 MarR family FY146_24840 PF07690 Major Facilitator Superfamily FY146_24870 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY146_24875 PF00561 alpha/beta hydrolase fold FY146_24885 PF04752 ChaC-like protein FY146_24890 PF03466 LysR substrate binding domain FY146_24890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_24905 PF00011 Hsp20/alpha crystallin family FY146_24950 PF04956 TrbC/VIRB2 family FY146_24955 PF05101 Type IV secretory pathway, VirB3-like protein FY146_24960 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY146_24965 PF07996 Type IV secretion system proteins FY146_24975 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY146_24985 PF04335 VirB8 protein FY146_24990 PF03524 Conjugal transfer protein FY146_24995 PF03743 Bacterial conjugation TrbI-like protein FY146_25000 PF00437 Type II/IV secretion system protein FY146_25020 PF03230 Antirestriction protein FY146_25100 PF05406 WGR domain FY146_25115 PF02534 Type IV secretory system Conjugative DNA transfer FY146_25130 PF01443 Viral (Superfamily 1) RNA helicase FY146_25130 PF17841 BID domain of Bartonella effector protein (Bep) FY146_25130 PF03389 MobA/MobL family FY146_25140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_25140 PF03466 LysR substrate binding domain FY146_25165 PF00196 Bacterial regulatory proteins, luxR family FY146_25165 PF03472 Autoinducer binding domain FY146_25170 PF00765 Autoinducer synthase FY146_25180 PF00486 Transcriptional regulatory protein, C terminal FY146_25180 PF00072 Response regulator receiver domain FY146_25205 PF00795 Carbon-nitrogen hydrolase FY146_25215 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY146_25220 PF08402 TOBE domain FY146_25220 PF00005 ABC transporter FY146_25225 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25230 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25245 PF13173 AAA domain FY146_25245 PF13635 Domain of unknown function (DUF4143) FY146_25250 PF02785 Biotin carboxylase C-terminal domain FY146_25250 PF00364 Biotin-requiring enzyme FY146_25250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY146_25250 PF00289 Biotin carboxylase, N-terminal domain FY146_25250 PF00682 HMGL-like FY146_25250 PF02436 Conserved carboxylase domain FY146_25255 PF14552 Tautomerase enzyme FY146_25260 PF03328 HpcH/HpaI aldolase/citrate lyase family FY146_25265 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY146_25275 PF01614 Bacterial transcriptional regulator FY146_25275 PF09339 IclR helix-turn-helix domain FY146_25285 PF00005 ABC transporter FY146_25290 PF00005 ABC transporter FY146_25300 PF02653 Branched-chain amino acid transport system / permease component FY146_25300 PF11862 Domain of unknown function (DUF3382) FY146_25320 PF00682 HMGL-like FY146_25320 PF08502 LeuA allosteric (dimerisation) domain FY146_25325 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25330 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25335 PF00480 ROK family FY146_25335 PF01047 MarR family FY146_25340 PF00128 Alpha amylase, catalytic domain FY146_25345 PF07687 Peptidase dimerisation domain FY146_25345 PF01546 Peptidase family M20/M25/M40 FY146_25350 PF01261 Xylose isomerase-like TIM barrel FY146_25355 PF17912 MalK OB fold domain FY146_25355 PF00005 ABC transporter FY146_25365 PF00480 ROK family FY146_25370 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25375 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25380 PF01547 Bacterial extracellular solute-binding protein FY146_25385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY146_25385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY146_25400 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY146_25415 PF00005 ABC transporter FY146_25420 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25425 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25430 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_25435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_25435 PF00005 ABC transporter FY146_25440 PF00005 ABC transporter FY146_25440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_25445 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_25445 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25450 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_25460 PF03737 Aldolase/RraA FY146_25465 PF03466 LysR substrate binding domain FY146_25465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_25470 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY146_25475 PF01546 Peptidase family M20/M25/M40 FY146_25475 PF07687 Peptidase dimerisation domain FY146_25480 PF01156 Inosine-uridine preferring nucleoside hydrolase FY146_25500 PF00857 Isochorismatase family FY146_25540 PF01548 Transposase FY146_25540 PF02371 Transposase IS116/IS110/IS902 family FY146_25545 PF01042 Endoribonuclease L-PSP FY146_25550 PF03447 Homoserine dehydrogenase, NAD binding domain FY146_25550 PF01958 Domain of unknown function DUF108 FY146_25560 PF01266 FAD dependent oxidoreductase FY146_25570 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_25570 PF04324 BFD-like [2Fe-2S] binding domain FY146_25575 PF07729 FCD domain FY146_25575 PF00392 Bacterial regulatory proteins, gntR family FY146_25590 PF00171 Aldehyde dehydrogenase family FY146_25595 PF00732 GMC oxidoreductase FY146_25595 PF05199 GMC oxidoreductase FY146_25600 PF00005 ABC transporter FY146_25605 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25615 PF00296 Luciferase-like monooxygenase FY146_25625 PF00005 ABC transporter FY146_25625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_25630 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25630 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_25635 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_25660 PF03928 Haem-degrading FY146_25695 PF07690 Major Facilitator Superfamily FY146_25705 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25710 PF00528 Binding-protein-dependent transport system inner membrane component FY146_25715 PF08402 TOBE domain FY146_25715 PF00005 ABC transporter FY146_25725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY146_25725 PF13378 Enolase C-terminal domain-like FY146_25735 PF09339 IclR helix-turn-helix domain FY146_25735 PF01614 Bacterial transcriptional regulator FY146_25740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_25740 PF03466 LysR substrate binding domain FY146_25750 PF13458 Periplasmic binding protein FY146_25755 PF00005 ABC transporter FY146_25760 PF00005 ABC transporter FY146_25760 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_25775 PF02585 GlcNAc-PI de-N-acetylase FY146_25780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY146_25785 PF03737 Aldolase/RraA FY146_25790 PF04303 PrpF protein FY146_25800 PF00135 Carboxylesterase family FY146_25805 PF02653 Branched-chain amino acid transport system / permease component FY146_25810 PF00005 ABC transporter FY146_25820 PF00135 Carboxylesterase family FY146_25830 PF00135 Carboxylesterase family FY146_25840 PF07690 Major Facilitator Superfamily FY146_25845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_25845 PF03466 LysR substrate binding domain FY146_25870 PF00005 ABC transporter FY146_25875 PF13407 Periplasmic binding protein domain FY146_25880 PF02653 Branched-chain amino acid transport system / permease component FY146_25885 PF00480 ROK family FY146_25885 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY146_25890 PF01979 Amidohydrolase family FY146_25910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY146_25910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY146_25915 PF01261 Xylose isomerase-like TIM barrel FY146_25920 PF08450 SMP-30/Gluconolactonase/LRE-like region FY146_25925 PF00171 Aldehyde dehydrogenase family FY146_25930 PF00202 Aminotransferase class-III FY146_25935 PF01546 Peptidase family M20/M25/M40 FY146_25935 PF07687 Peptidase dimerisation domain FY146_25940 PF00171 Aldehyde dehydrogenase family FY146_25950 PF00005 ABC transporter FY146_25955 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_25955 PF00005 ABC transporter FY146_25965 PF02653 Branched-chain amino acid transport system / permease component FY146_25970 PF13458 Periplasmic binding protein FY146_25980 PF12802 MarR family FY146_26000 PF00990 Diguanylate cyclase, GGDEF domain FY146_26000 PF17158 Membrane-associated sensor, integral membrane domain FY146_26015 PF07690 Major Facilitator Superfamily FY146_26020 PF00171 Aldehyde dehydrogenase family FY146_26025 PF00501 AMP-binding enzyme FY146_26025 PF13193 AMP-binding enzyme C-terminal domain FY146_26030 PF00378 Enoyl-CoA hydratase/isomerase FY146_26035 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_26035 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY146_26035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY146_26035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_26045 PF08240 Alcohol dehydrogenase GroES-like domain FY146_26045 PF00107 Zinc-binding dehydrogenase FY146_26055 PF00551 Formyl transferase FY146_26060 PF02219 Methylenetetrahydrofolate reductase FY146_26065 PF01571 Aminomethyltransferase folate-binding domain FY146_26075 PF03328 HpcH/HpaI aldolase/citrate lyase family FY146_26080 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY146_26085 PF04444 Catechol dioxygenase N terminus FY146_26085 PF00775 Dioxygenase FY146_26090 PF07729 FCD domain FY146_26090 PF00392 Bacterial regulatory proteins, gntR family FY146_26150 PF12833 Helix-turn-helix domain FY146_26150 PF14525 AraC-binding-like domain FY146_26160 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY146_26160 PF00005 ABC transporter FY146_26165 PF00005 ABC transporter FY146_26170 PF02653 Branched-chain amino acid transport system / permease component FY146_26230 PF03551 Transcriptional regulator PadR-like family FY146_26240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_26240 PF03466 LysR substrate binding domain FY146_26245 PF00857 Isochorismatase family FY146_26260 PF03466 LysR substrate binding domain FY146_26260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_26265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY146_26270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_26270 PF03466 LysR substrate binding domain FY146_26275 PF13533 Biotin-lipoyl like FY146_26295 PF00561 alpha/beta hydrolase fold FY146_26300 PF03358 NADPH-dependent FMN reductase FY146_26305 PF02678 Pirin FY146_26305 PF17954 Quercetinase C-terminal cupin domain FY146_26320 PF00857 Isochorismatase family FY146_26330 PF00440 Bacterial regulatory proteins, tetR family FY146_26335 PF00005 ABC transporter FY146_26340 PF01032 FecCD transport family FY146_26345 PF01032 FecCD transport family FY146_26355 PF07732 Multicopper oxidase FY146_26355 PF07731 Multicopper oxidase FY146_26355 PF00394 Multicopper oxidase FY146_26355 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY146_26360 PF00591 Glycosyl transferase family, a/b domain FY146_26360 PF02885 Glycosyl transferase family, helical bundle domain FY146_26365 PF07715 TonB-dependent Receptor Plug Domain FY146_26365 PF00593 TonB dependent receptor FY146_26400 PF03551 Transcriptional regulator PadR-like family FY146_26435 PF07732 Multicopper oxidase FY146_26435 PF00394 Multicopper oxidase FY146_26435 PF07731 Multicopper oxidase FY146_26455 PF01209 ubiE/COQ5 methyltransferase family FY146_26470 PF04079 Segregation and condensation complex subunit ScpB FY146_26480 PF00589 Phage integrase family FY146_26490 PF13614 AAA domain FY146_26495 PF02195 ParB-like nuclease domain FY146_26495 PF07506 RepB plasmid partitioning protein FY146_26500 PF11800 Replication protein C C-terminal region FY146_26500 PF03428 Replication protein C N-terminal domain FY146_26505 PF00239 Resolvase, N terminal domain FY146_26510 PF07756 Protein of unknown function (DUF1612) FY146_26510 PF11972 HTH DNA binding domain FY146_26530 PF00239 Resolvase, N terminal domain FY146_26530 PF02796 Helix-turn-helix domain of resolvase FY146_26535 PF07690 Major Facilitator Superfamily FY146_26545 PF08808 RES domain FY146_26585 PF00293 NUDIX domain FY146_26600 PF03543 Yersinia/Haemophilus virulence surface antigen FY146_26600 PF13332 Hemagglutinin repeat FY146_26600 PF02661 Fic/DOC family FY146_26600 PF05860 haemagglutination activity domain FY146_26600 PF13018 Extended Signal Peptide of Type V secretion system FY146_26625 PF17762 HTH domain found in ParB protein FY146_26625 PF02195 ParB-like nuclease domain FY146_26650 PF03831 PhnA domain FY146_26650 PF08274 PhnA Zinc-Ribbon FY146_26670 PF01810 LysE type translocator FY146_26685 PF05284 Protein of unknown function (DUF736) FY146_26695 PF13417 Glutathione S-transferase, N-terminal domain FY146_26725 PF00107 Zinc-binding dehydrogenase FY146_26725 PF08240 Alcohol dehydrogenase GroES-like domain FY146_26745 PF13407 Periplasmic binding protein domain FY146_26750 PF02653 Branched-chain amino acid transport system / permease component FY146_26755 PF00005 ABC transporter FY146_26770 PF01810 LysE type translocator FY146_26775 PF00216 Bacterial DNA-binding protein FY146_26795 PF02534 Type IV secretory system Conjugative DNA transfer FY146_26800 PF06412 Conjugal transfer protein TraD FY146_26805 PF07820 TraC-like protein FY146_26810 PF03389 MobA/MobL family FY146_26810 PF17841 BID domain of Bartonella effector protein (Bep) FY146_26810 PF01443 Viral (Superfamily 1) RNA helicase FY146_26815 PF10502 Signal peptidase, peptidase S26 FY146_26820 PF00795 Carbon-nitrogen hydrolase FY146_26825 PF06871 TraH_2 FY146_26830 PF09228 Prokaryotic Transcriptional repressor TraM FY146_26835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY146_26835 PF08447 PAS fold FY146_26835 PF13426 PAS domain FY146_26845 PF00196 Bacterial regulatory proteins, luxR family FY146_26845 PF03472 Autoinducer binding domain FY146_26850 PF00128 Alpha amylase, catalytic domain FY146_26855 PF02690 Na+/Pi-cotransporter FY146_26865 PF08220 DeoR-like helix-turn-helix domain FY146_26865 PF00455 DeoR C terminal sensor domain FY146_26870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_26875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_26875 PF00005 ABC transporter FY146_26880 PF00005 ABC transporter FY146_26880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_26885 PF00528 Binding-protein-dependent transport system inner membrane component FY146_26890 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_26890 PF00528 Binding-protein-dependent transport system inner membrane component FY146_26895 PF03009 Glycerophosphoryl diester phosphodiesterase family FY146_26900 PF00459 Inositol monophosphatase family FY146_26925 PF00067 Cytochrome P450 FY146_26930 PF00067 Cytochrome P450 FY146_26945 PF06903 VirK protein FY146_26980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY146_26980 PF00512 His Kinase A (phospho-acceptor) domain FY146_26985 PF01464 Transglycosylase SLT domain FY146_26990 PF04956 TrbC/VIRB2 family FY146_26995 PF05101 Type IV secretory pathway, VirB3-like protein FY146_27000 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY146_27010 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY146_27015 PF17413 Outer membrane lipoprotein virB7 FY146_27020 PF04335 VirB8 protein FY146_27025 PF03524 Conjugal transfer protein FY146_27030 PF03743 Bacterial conjugation TrbI-like protein FY146_27035 PF00437 Type II/IV secretion system protein FY146_27040 PF00072 Response regulator receiver domain FY146_27040 PF00486 Transcriptional regulatory protein, C terminal FY146_27045 PF07181 VirC2 protein FY146_27050 PF07015 VirC1 protein FY146_27055 PF07328 T-DNA border endonuclease VirD1 FY146_27060 PF03432 Relaxase/Mobilisation nuclease domain FY146_27070 PF02534 Type IV secretory system Conjugative DNA transfer FY146_27090 PF12189 Single-strand DNA-binding protein FY146_27095 PF07229 VirE2 FY146_27115 PF05717 IS66 Orf2 like protein FY146_27120 PF03472 Autoinducer binding domain FY146_27120 PF00196 Bacterial regulatory proteins, luxR family FY146_27135 PF00459 Inositol monophosphatase family FY146_27170 PF02027 RolB/RolC glucosidase family FY146_27175 PF01425 Amidase FY146_27180 PF01593 Flavin containing amine oxidoreductase FY146_27180 PF02027 RolB/RolC glucosidase family FY146_27190 PF02027 RolB/RolC glucosidase family FY146_27195 PF01380 SIS domain FY146_27200 PF00300 Histidine phosphatase superfamily (branch 1) FY146_27200 PF00106 short chain dehydrogenase FY146_27205 PF00557 Metallopeptidase family M24 FY146_27205 PF01321 Creatinase/Prolidase N-terminal domain FY146_27225 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27230 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27235 PF00005 ABC transporter FY146_27235 PF08402 TOBE domain FY146_27265 PF08402 TOBE domain FY146_27265 PF00005 ABC transporter FY146_27270 PF00557 Metallopeptidase family M24 FY146_27270 PF01321 Creatinase/Prolidase N-terminal domain FY146_27275 PF00294 pfkB family carbohydrate kinase FY146_27290 PF00106 short chain dehydrogenase FY146_27295 PF00920 Dehydratase family FY146_27300 PF00248 Aldo/keto reductase family FY146_27315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_27320 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_27320 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27325 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27330 PF00005 ABC transporter FY146_27330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_27335 PF00106 short chain dehydrogenase FY146_27335 PF00300 Histidine phosphatase superfamily (branch 1) FY146_27340 PF01266 FAD dependent oxidoreductase FY146_27345 PF05378 Hydantoinase/oxoprolinase N-terminal region FY146_27345 PF01968 Hydantoinase/oxoprolinase FY146_27360 PF00455 DeoR C terminal sensor domain FY146_27360 PF08220 DeoR-like helix-turn-helix domain FY146_27370 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27375 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27375 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_27380 PF00005 ABC transporter FY146_27380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_27385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_27395 PF03743 Bacterial conjugation TrbI-like protein FY146_27405 PF03524 Conjugal transfer protein FY146_27410 PF04335 VirB8 protein FY146_27415 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY146_27420 PF10907 Protein of unknown function (DUF2749) FY146_27430 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY146_27435 PF05101 Type IV secretory pathway, VirB3-like protein FY146_27440 PF04956 TrbC/VIRB2 family FY146_27445 PF00437 Type II/IV secretion system protein FY146_27450 PF00765 Autoinducer synthase FY146_27455 PF13614 AAA domain FY146_27460 PF07506 RepB plasmid partitioning protein FY146_27460 PF02195 ParB-like nuclease domain FY146_27465 PF03428 Replication protein C N-terminal domain FY146_27465 PF11800 Replication protein C C-terminal region FY146_27470 PF00239 Resolvase, N terminal domain FY146_27475 PF07756 Protein of unknown function (DUF1612) FY146_27475 PF11972 HTH DNA binding domain FY146_27495 PF08808 RES domain FY146_27515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_27515 PF03466 LysR substrate binding domain FY146_27525 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27530 PF00005 ABC transporter FY146_27535 PF09084 NMT1/THI5 like FY146_27540 PF00296 Luciferase-like monooxygenase FY146_27545 PF00296 Luciferase-like monooxygenase FY146_27555 PF05199 GMC oxidoreductase FY146_27555 PF00732 GMC oxidoreductase FY146_27560 PF00561 alpha/beta hydrolase fold FY146_27580 PF02653 Branched-chain amino acid transport system / permease component FY146_27585 PF00005 ABC transporter FY146_27595 PF00753 Metallo-beta-lactamase superfamily FY146_27600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY146_27600 PF02770 Acyl-CoA dehydrogenase, middle domain FY146_27600 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY146_27605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_27610 PF00005 ABC transporter FY146_27610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_27615 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27615 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_27620 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27630 PF00296 Luciferase-like monooxygenase FY146_27635 PF00296 Luciferase-like monooxygenase FY146_27640 PF03466 LysR substrate binding domain FY146_27640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_27650 PF01434 Peptidase family M41 FY146_27650 PF17862 AAA+ lid domain FY146_27650 PF00004 ATPase family associated with various cellular activities (AAA) FY146_27665 PF00005 ABC transporter FY146_27665 PF00664 ABC transporter transmembrane region FY146_27670 PF00005 ABC transporter FY146_27670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_27675 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_27675 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27680 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_27695 PF01261 Xylose isomerase-like TIM barrel FY146_27700 PF00291 Pyridoxal-phosphate dependent enzyme FY146_27705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY146_27715 PF02195 ParB-like nuclease domain FY146_27725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY146_27725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY146_27725 PF01842 ACT domain FY146_27730 PF00483 Nucleotidyl transferase FY146_27735 PF00155 Aminotransferase class I and II FY146_27760 PF01068 ATP dependent DNA ligase domain FY146_27760 PF13298 DNA polymerase Ligase (LigD) FY146_27760 PF04679 ATP dependent DNA ligase C terminal region FY146_27775 PF14579 Helix-hairpin-helix motif FY146_27775 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY146_27775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY146_27775 PF02811 PHP domain FY146_27790 PF17841 BID domain of Bartonella effector protein (Bep) FY146_27790 PF02661 Fic/DOC family FY146_27815 PF02195 ParB-like nuclease domain FY146_27815 PF17762 HTH domain found in ParB protein FY146_27840 PF08274 PhnA Zinc-Ribbon FY146_27840 PF03831 PhnA domain FY146_27865 PF05284 Protein of unknown function (DUF736) FY146_27870 PF00216 Bacterial DNA-binding protein FY146_27890 PF02534 Type IV secretory system Conjugative DNA transfer FY146_27895 PF06412 Conjugal transfer protein TraD FY146_27900 PF07820 TraC-like protein FY146_27905 PF01443 Viral (Superfamily 1) RNA helicase FY146_27905 PF03389 MobA/MobL family FY146_27905 PF17841 BID domain of Bartonella effector protein (Bep) FY146_27910 PF10502 Signal peptidase, peptidase S26 FY146_27915 PF00795 Carbon-nitrogen hydrolase FY146_27920 PF06871 TraH_2 FY146_27925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_27925 PF03466 LysR substrate binding domain FY146_27930 PF00005 ABC transporter FY146_27935 PF00528 Binding-protein-dependent transport system inner membrane component FY146_27940 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_27945 PF00296 Luciferase-like monooxygenase FY146_27950 PF00296 Luciferase-like monooxygenase FY146_27960 PF09228 Prokaryotic Transcriptional repressor TraM FY146_27970 PF03472 Autoinducer binding domain FY146_27970 PF00196 Bacterial regulatory proteins, luxR family FY146_27975 PF00128 Alpha amylase, catalytic domain FY146_27985 PF02690 Na+/Pi-cotransporter FY146_28005 PF00459 Inositol monophosphatase family FY146_28010 PF03009 Glycerophosphoryl diester phosphodiesterase family FY146_28015 PF03009 Glycerophosphoryl diester phosphodiesterase family FY146_28020 PF00528 Binding-protein-dependent transport system inner membrane component FY146_28020 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_28025 PF00528 Binding-protein-dependent transport system inner membrane component FY146_28030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_28030 PF00005 ABC transporter FY146_28035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_28035 PF00005 ABC transporter FY146_28040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_28045 PF00455 DeoR C terminal sensor domain FY146_28045 PF08220 DeoR-like helix-turn-helix domain FY146_28050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_28055 PF08220 DeoR-like helix-turn-helix domain FY146_28055 PF00455 DeoR C terminal sensor domain FY146_28060 PF00528 Binding-protein-dependent transport system inner membrane component FY146_28060 PF12911 N-terminal TM domain of oligopeptide transport permease C FY146_28065 PF00528 Binding-protein-dependent transport system inner membrane component FY146_28075 PF00005 ABC transporter FY146_28075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_28080 PF00005 ABC transporter FY146_28080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY146_28085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY146_28090 PF00300 Histidine phosphatase superfamily (branch 1) FY146_28095 PF00325 Bacterial regulatory proteins, crp family FY146_28095 PF04198 Putative sugar-binding domain FY146_28100 PF00196 Bacterial regulatory proteins, luxR family FY146_28100 PF03472 Autoinducer binding domain FY146_28110 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY146_28115 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY146_28120 PF00491 Arginase family FY146_28125 PF04324 BFD-like [2Fe-2S] binding domain FY146_28125 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY146_28135 PF01266 FAD dependent oxidoreductase FY146_28140 PF05378 Hydantoinase/oxoprolinase N-terminal region FY146_28140 PF01968 Hydantoinase/oxoprolinase FY146_28150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_28150 PF03466 LysR substrate binding domain FY146_28155 PF00528 Binding-protein-dependent transport system inner membrane component FY146_28160 PF00528 Binding-protein-dependent transport system inner membrane component FY146_28165 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY146_28170 PF00005 ABC transporter FY146_28175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY146_28175 PF03466 LysR substrate binding domain FY146_28180 PF03743 Bacterial conjugation TrbI-like protein FY146_28190 PF03524 Conjugal transfer protein FY146_28195 PF04335 VirB8 protein FY146_28200 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY146_28205 PF10907 Protein of unknown function (DUF2749) FY146_28215 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY146_28220 PF05101 Type IV secretory pathway, VirB3-like protein FY146_28225 PF04956 TrbC/VIRB2 family FY146_28230 PF00437 Type II/IV secretion system protein FY146_28235 PF00765 Autoinducer synthase