locus-tag class description FY148_00005 PF00308 Bacterial dnaA protein FY148_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY148_00005 PF11638 DnaA N-terminal domain FY148_00010 PF06969 HemN C-terminal domain FY148_00010 PF04055 Radical SAM superfamily FY148_00015 PF01725 Ham1 family FY148_00020 PF01138 3' exoribonuclease family, domain 1 FY148_00020 PF03725 3' exoribonuclease family, domain 2 FY148_00025 PF01628 HrcA protein C terminal domain FY148_00030 PF01025 GrpE FY148_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY148_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY148_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY148_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY148_00045 PF04963 Sigma-54 factor, core binding domain FY148_00045 PF04552 Sigma-54, DNA binding domain FY148_00050 PF00005 ABC transporter FY148_00055 PF03968 OstA-like protein FY148_00065 PF01343 Peptidase family S49 FY148_00070 PF00216 Bacterial DNA-binding protein FY148_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY148_00080 PF02926 THUMP domain FY148_00080 PF01170 Putative RNA methylase family UPF0020 FY148_00085 PF00588 SpoU rRNA Methylase family FY148_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY148_00090 PF01252 Signal peptidase (SPase) II FY148_00095 PF00672 HAMP domain FY148_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_00095 PF00512 His Kinase A (phospho-acceptor) domain FY148_00095 PF01627 Hpt domain FY148_00095 PF00072 Response regulator receiver domain FY148_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY148_00105 PF00488 MutS domain V FY148_00105 PF05192 MutS domain III FY148_00105 PF05190 MutS family domain IV FY148_00105 PF05188 MutS domain II FY148_00105 PF01624 MutS domain I FY148_00110 PF01842 ACT domain FY148_00110 PF08335 GlnD PII-uridylyltransferase FY148_00110 PF01966 HD domain FY148_00110 PF01909 Nucleotidyltransferase domain FY148_00115 PF03023 Lipid II flippase MurJ FY148_00125 PF00579 tRNA synthetases class I (W and Y) FY148_00135 PF01106 NifU-like domain FY148_00140 PF00814 Glycoprotease family FY148_00150 PF01475 Ferric uptake regulator family FY148_00155 PF01553 Acyltransferase FY148_00160 PF04055 Radical SAM superfamily FY148_00160 PF01938 TRAM domain FY148_00160 PF00919 Uncharacterized protein family UPF0004 FY148_00165 PF02562 PhoH-like protein FY148_00170 PF02130 Uncharacterized protein family UPF0054 FY148_00175 PF03471 Transporter associated domain FY148_00175 PF00571 CBS domain FY148_00180 PF00795 Carbon-nitrogen hydrolase FY148_00185 PF01381 Helix-turn-helix FY148_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY148_00190 PF02772 S-adenosylmethionine synthetase, central domain FY148_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY148_00195 PF02390 Putative methyltransferase FY148_00200 PF00294 pfkB family carbohydrate kinase FY148_00205 PF02646 RmuC family FY148_00210 PF01327 Polypeptide deformylase FY148_00215 PF02911 Formyl transferase, C-terminal domain FY148_00215 PF00551 Formyl transferase FY148_00220 PF01416 tRNA pseudouridine synthase FY148_00230 PF07687 Peptidase dimerisation domain FY148_00230 PF01546 Peptidase family M20/M25/M40 FY148_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY148_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY148_00245 PF00672 HAMP domain FY148_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY148_00255 PF00011 Hsp20/alpha crystallin family FY148_00280 PF00696 Amino acid kinase family FY148_00290 PF01926 50S ribosome-binding GTPase FY148_00295 PF02096 60Kd inner membrane protein FY148_00295 PF14849 YidC periplasmic domain FY148_00300 PF00825 Ribonuclease P FY148_00305 PF00468 Ribosomal protein L34 FY148_00310 PF00672 HAMP domain FY148_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_00310 PF02203 Tar ligand binding domain homologue FY148_00315 PF00512 His Kinase A (phospho-acceptor) domain FY148_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_00325 PF01209 ubiE/COQ5 methyltransferase family FY148_00330 PF00005 ABC transporter FY148_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY148_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY148_00350 PF00149 Calcineurin-like phosphoesterase FY148_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY148_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY148_00365 PF05544 Proline racemase FY148_00370 PF01979 Amidohydrolase family FY148_00375 PF00156 Phosphoribosyl transferase domain FY148_00380 PF00294 pfkB family carbohydrate kinase FY148_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY148_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY148_00400 PF00342 Phosphoglucose isomerase FY148_00405 PF13193 AMP-binding enzyme C-terminal domain FY148_00405 PF00501 AMP-binding enzyme FY148_00410 PF08402 TOBE domain FY148_00410 PF00005 ABC transporter FY148_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY148_00425 PF07715 TonB-dependent Receptor Plug Domain FY148_00425 PF00593 TonB dependent receptor FY148_00445 PF01679 Proteolipid membrane potential modulator FY148_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY148_00475 PF16736 Single Cache-like FY148_00475 PF00989 PAS fold FY148_00475 PF00512 His Kinase A (phospho-acceptor) domain FY148_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_00480 PF12849 PBP superfamily domain FY148_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY148_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY148_00495 PF00005 ABC transporter FY148_00500 PF01895 PhoU domain FY148_00505 PF00486 Transcriptional regulatory protein, C terminal FY148_00505 PF00072 Response regulator receiver domain FY148_00515 PF00202 Aminotransferase class-III FY148_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY148_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY148_00525 PF01430 Hsp33 protein FY148_00530 PF04379 ApaG domain FY148_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY148_00545 PF00692 dUTPase FY148_00555 PF13356 Arm DNA-binding domain FY148_00555 PF00589 Phage integrase family FY148_00560 PF08479 POTRA domain, ShlB-type FY148_00560 PF17287 POTRA domain FY148_00560 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FY148_00580 PF02796 Helix-turn-helix domain of resolvase FY148_00580 PF00239 Resolvase, N terminal domain FY148_00630 PF08671 Anti-repressor SinI FY148_00630 PF01381 Helix-turn-helix FY148_00645 PF00664 ABC transporter transmembrane region FY148_00645 PF00005 ABC transporter FY148_00680 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY148_00685 PF00230 Major intrinsic protein FY148_00725 PF00196 Bacterial regulatory proteins, luxR family FY148_00725 PF00072 Response regulator receiver domain FY148_00735 PF01180 Dihydroorotate dehydrogenase FY148_00750 PF08241 Methyltransferase domain FY148_00770 PF02082 Transcriptional regulator FY148_00775 PF00270 DEAD/DEAH box helicase FY148_00775 PF08494 DEAD/H associated FY148_00775 PF00271 Helicase conserved C-terminal domain FY148_00795 PF01925 Sulfite exporter TauE/SafE FY148_00805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_00805 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY148_00805 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_00805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_00810 PF00108 Thiolase, N-terminal domain FY148_00810 PF02803 Thiolase, C-terminal domain FY148_00815 PF00378 Enoyl-CoA hydratase/isomerase FY148_00815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY148_00815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY148_00835 PF03334 Na+/H+ antiporter subunit FY148_00840 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY148_00845 PF01899 Na+/H+ ion antiporter subunit FY148_00850 PF00361 Proton-conducting membrane transporter FY148_00855 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY148_00860 PF00361 Proton-conducting membrane transporter FY148_00860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY148_00860 PF13244 Domain of unknown function (DUF4040) FY148_00860 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY148_00870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_00880 PF00072 Response regulator receiver domain FY148_00885 PF02895 Signal transducing histidine kinase, homodimeric domain FY148_00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_00885 PF01627 Hpt domain FY148_00885 PF01584 CheW-like domain FY148_00890 PF01739 CheR methyltransferase, SAM binding domain FY148_00890 PF03705 CheR methyltransferase, all-alpha domain FY148_00895 PF01339 CheB methylesterase FY148_00895 PF00072 Response regulator receiver domain FY148_00900 PF00072 Response regulator receiver domain FY148_00905 PF03975 CheD chemotactic sensory transduction FY148_00915 PF01514 Secretory protein of YscJ/FliF family FY148_00915 PF08345 Flagellar M-ring protein C-terminal FY148_00920 PF00196 Bacterial regulatory proteins, luxR family FY148_00920 PF03472 Autoinducer binding domain FY148_00930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_00930 PF00672 HAMP domain FY148_00935 PF00672 HAMP domain FY148_00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_00935 PF00512 His Kinase A (phospho-acceptor) domain FY148_00935 PF01627 Hpt domain FY148_00935 PF00072 Response regulator receiver domain FY148_00940 PF01741 Large-conductance mechanosensitive channel, MscL FY148_00945 PF00155 Aminotransferase class I and II FY148_00950 PF01370 NAD dependent epimerase/dehydratase family FY148_00960 PF03884 DNA gyrase inhibitor YacG FY148_00965 PF02545 Maf-like protein FY148_00970 PF01176 Translation initiation factor 1A / IF-1 FY148_00980 PF06793 Uncharacterised protein family (UPF0262) FY148_00985 PF00815 Histidinol dehydrogenase FY148_00995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY148_01010 PF00700 Bacterial flagellin C-terminal helical region FY148_01010 PF00669 Bacterial flagellin N-terminal helical region FY148_01015 PF00669 Bacterial flagellin N-terminal helical region FY148_01015 PF00700 Bacterial flagellin C-terminal helical region FY148_01020 PF00669 Bacterial flagellin N-terminal helical region FY148_01020 PF00700 Bacterial flagellin C-terminal helical region FY148_01025 PF00813 FliP family FY148_01035 PF02107 Flagellar L-ring protein FY148_01045 PF02119 Flagellar P-ring protein FY148_01050 PF13144 Chaperone for flagella basal body P-ring formation FY148_01055 PF00460 Flagella basal body rod protein FY148_01055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY148_01060 PF02049 Flagellar hook-basal body complex protein FliE FY148_01065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY148_01070 PF00460 Flagella basal body rod protein FY148_01080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY148_01080 PF18269 T3SS EscN ATPase C-terminal domain FY148_01085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY148_01085 PF00460 Flagella basal body rod protein FY148_01095 PF01618 MotA/TolQ/ExbB proton channel family FY148_01100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY148_01105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY148_01110 PF14842 FliG N-terminal domain FY148_01110 PF01706 FliG C-terminal domain FY148_01110 PF14841 FliG middle domain FY148_01115 PF01312 FlhB HrpN YscU SpaS Family FY148_01125 PF00700 Bacterial flagellin C-terminal helical region FY148_01125 PF00669 Bacterial flagellin N-terminal helical region FY148_01140 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY148_01140 PF00691 OmpA family FY148_01150 PF02120 Flagellar hook-length control protein FliK FY148_01160 PF00486 Transcriptional regulatory protein, C terminal FY148_01165 PF07559 Flagellar basal body protein FlaE FY148_01165 PF00460 Flagella basal body rod protein FY148_01165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY148_01185 PF07378 Flagellar protein FlbT FY148_01190 PF03963 Flagellar hook capping protein - N-terminal region FY148_01195 PF01313 Bacterial export proteins, family 3 FY148_01200 PF00771 FHIPEP family FY148_01205 PF01311 Bacterial export proteins, family 1 FY148_01240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY148_01240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY148_01245 PF00356 Bacterial regulatory proteins, lacI family FY148_01250 PF01547 Bacterial extracellular solute-binding protein FY148_01255 PF00528 Binding-protein-dependent transport system inner membrane component FY148_01260 PF00528 Binding-protein-dependent transport system inner membrane component FY148_01265 PF00128 Alpha amylase, catalytic domain FY148_01270 PF00005 ABC transporter FY148_01270 PF03459 TOBE domain FY148_01270 PF17912 MalK OB fold domain FY148_01285 PF00920 Dehydratase family FY148_01290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY148_01295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY148_01295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY148_01305 PF01266 FAD dependent oxidoreductase FY148_01310 PF00120 Glutamine synthetase, catalytic domain FY148_01335 PF00463 Isocitrate lyase family FY148_01340 PF06114 IrrE N-terminal-like domain FY148_01340 PF09856 Predicted transcriptional regulator (DUF2083) FY148_01340 PF01381 Helix-turn-helix FY148_01345 PF13416 Bacterial extracellular solute-binding protein FY148_01350 PF08402 TOBE domain FY148_01350 PF00005 ABC transporter FY148_01355 PF00528 Binding-protein-dependent transport system inner membrane component FY148_01360 PF00528 Binding-protein-dependent transport system inner membrane component FY148_01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_01370 PF00512 His Kinase A (phospho-acceptor) domain FY148_01370 PF00989 PAS fold FY148_01370 PF13188 PAS domain FY148_01370 PF13426 PAS domain FY148_01380 PF02541 Ppx/GppA phosphatase family FY148_01385 PF01728 FtsJ-like methyltransferase FY148_01390 PF07690 Major Facilitator Superfamily FY148_01395 PF00753 Metallo-beta-lactamase superfamily FY148_01400 PF00571 CBS domain FY148_01400 PF00478 IMP dehydrogenase / GMP reductase domain FY148_01410 PF08240 Alcohol dehydrogenase GroES-like domain FY148_01410 PF00107 Zinc-binding dehydrogenase FY148_01415 PF01738 Dienelactone hydrolase family FY148_01420 PF00994 Probable molybdopterin binding domain FY148_01425 PF08544 GHMP kinases C terminal FY148_01425 PF00288 GHMP kinases N terminal domain FY148_01435 PF00348 Polyprenyl synthetase FY148_01450 PF06965 Na+/H+ antiporter 1 FY148_01450 PF01343 Peptidase family S49 FY148_01460 PF02091 Glycyl-tRNA synthetase alpha subunit FY148_01470 PF04011 LemA family FY148_01475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY148_01485 PF05746 DALR anticodon binding domain FY148_01485 PF02092 Glycyl-tRNA synthetase beta subunit FY148_01490 PF04463 Protein of unknown function (DUF523) FY148_01495 PF17200 Single Cache domain 2 FY148_01495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_01495 PF00672 HAMP domain FY148_01505 PF02844 Phosphoribosylglycinamide synthetase, N domain FY148_01505 PF02843 Phosphoribosylglycinamide synthetase, C domain FY148_01505 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY148_01510 PF17674 HHH domain FY148_01510 PF00575 S1 RNA binding domain FY148_01510 PF09371 Tex-like protein N-terminal domain FY148_01510 PF16921 Tex protein YqgF-like domain FY148_01525 PF01040 UbiA prenyltransferase family FY148_01540 PF03466 LysR substrate binding domain FY148_01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_01550 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY148_01555 PF04452 RNA methyltransferase FY148_01560 PF01384 Phosphate transporter family FY148_01570 PF05116 Sucrose-6F-phosphate phosphohydrolase FY148_01575 PF00534 Glycosyl transferases group 1 FY148_01575 PF13439 Glycosyltransferase Family 4 FY148_01580 PF00392 Bacterial regulatory proteins, gntR family FY148_01580 PF07729 FCD domain FY148_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_01595 PF03466 LysR substrate binding domain FY148_01600 PF02913 FAD linked oxidases, C-terminal domain FY148_01600 PF01565 FAD binding domain FY148_01605 PF01565 FAD binding domain FY148_01605 PF02913 FAD linked oxidases, C-terminal domain FY148_01610 PF02754 Cysteine-rich domain FY148_01610 PF13183 4Fe-4S dicluster domain FY148_01620 PF17969 L,D-transpeptidase C-terminal domain FY148_01620 PF03734 L,D-transpeptidase catalytic domain FY148_01625 PF03352 Methyladenine glycosylase FY148_01635 PF03601 Conserved hypothetical protein 698 FY148_01640 PF03466 LysR substrate binding domain FY148_01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_01670 PF03129 Anticodon binding domain FY148_01670 PF13393 Histidyl-tRNA synthetase FY148_01680 PF13393 Histidyl-tRNA synthetase FY148_01685 PF01634 ATP phosphoribosyltransferase FY148_01690 PF07681 DoxX FY148_01700 PF00118 TCP-1/cpn60 chaperonin family FY148_01705 PF00166 Chaperonin 10 Kd subunit FY148_01715 PF01687 Riboflavin kinase FY148_01715 PF06574 FAD synthetase FY148_01720 PF00133 tRNA synthetases class I (I, L, M and V) FY148_01720 PF08264 Anticodon-binding domain of tRNA FY148_01730 PF14437 MafB19-like deaminase FY148_01735 PF01479 S4 domain FY148_01735 PF00849 RNA pseudouridylate synthase FY148_01745 PF01734 Patatin-like phospholipase FY148_01750 PF02254 TrkA-N domain FY148_01750 PF00999 Sodium/hydrogen exchanger family FY148_01755 PF01523 Putative modulator of DNA gyrase FY148_01760 PF00459 Inositol monophosphatase family FY148_01770 PF00534 Glycosyl transferases group 1 FY148_01770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY148_01780 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY148_01790 PF01119 DNA mismatch repair protein, C-terminal domain FY148_01790 PF08676 MutL C terminal dimerisation domain FY148_01795 PF00072 Response regulator receiver domain FY148_01795 PF00486 Transcriptional regulatory protein, C terminal FY148_01800 PF03707 Bacterial signalling protein N terminal repeat FY148_01800 PF00990 Diguanylate cyclase, GGDEF domain FY148_01800 PF13188 PAS domain FY148_01800 PF00563 EAL domain FY148_01805 PF08450 SMP-30/Gluconolactonase/LRE-like region FY148_01810 PF01081 KDPG and KHG aldolase FY148_01815 PF05035 2-keto-3-deoxy-galactonokinase FY148_01825 PF09339 IclR helix-turn-helix domain FY148_01825 PF01614 Bacterial transcriptional regulator FY148_01830 PF03472 Autoinducer binding domain FY148_01830 PF00196 Bacterial regulatory proteins, luxR family FY148_01840 PF10609 NUBPL iron-transfer P-loop NTPase FY148_01845 PF01544 CorA-like Mg2+ transporter protein FY148_01850 PF02705 K+ potassium transporter FY148_01865 PF00119 ATP synthase A chain FY148_01870 PF00137 ATP synthase subunit C FY148_01875 PF00430 ATP synthase B/B' CF(0) FY148_01880 PF00430 ATP synthase B/B' CF(0) FY148_01885 PF09828 Chromate resistance exported protein FY148_01895 PF01351 Ribonuclease HII FY148_01910 PF02913 FAD linked oxidases, C-terminal domain FY148_01910 PF01565 FAD binding domain FY148_01915 PF03481 Putative GTP-binding controlling metal-binding FY148_01915 PF01300 Telomere recombination FY148_01925 PF00355 Rieske [2Fe-2S] domain FY148_01925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY148_01930 PF00970 Oxidoreductase FAD-binding domain FY148_01930 PF00111 2Fe-2S iron-sulfur cluster binding domain FY148_01930 PF00175 Oxidoreductase NAD-binding domain FY148_01935 PF07886 BA14K-like protein FY148_01940 PF07886 BA14K-like protein FY148_01950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_01950 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_01950 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY148_01950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_01965 PF05958 tRNA (Uracil-5-)-methyltransferase FY148_01970 PF01728 FtsJ-like methyltransferase FY148_01970 PF01479 S4 domain FY148_01975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_01975 PF00672 HAMP domain FY148_01975 PF02203 Tar ligand binding domain homologue FY148_01985 PF01037 Lrp/AsnC ligand binding domain FY148_01985 PF13404 AsnC-type helix-turn-helix domain FY148_02010 PF02780 Transketolase, C-terminal domain FY148_02010 PF02779 Transketolase, pyrimidine binding domain FY148_02010 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY148_02015 PF02678 Pirin FY148_02015 PF05726 Pirin C-terminal cupin domain FY148_02020 PF02609 Exonuclease VII small subunit FY148_02025 PF00850 Histone deacetylase domain FY148_02030 PF02632 BioY family FY148_02035 PF02361 Cobalt transport protein FY148_02040 PF00005 ABC transporter FY148_02045 PF06224 Winged helix DNA-binding domain FY148_02050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY148_02050 PF00925 GTP cyclohydrolase II FY148_02055 PF01264 Chorismate synthase FY148_02065 PF00300 Histidine phosphatase superfamily (branch 1) FY148_02075 PF01556 DnaJ C terminal domain FY148_02075 PF00226 DnaJ domain FY148_02075 PF00684 DnaJ central domain FY148_02085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY148_02085 PF01243 Pyridoxamine 5'-phosphate oxidase FY148_02105 PF13419 Haloacid dehalogenase-like hydrolase FY148_02115 PF01523 Putative modulator of DNA gyrase FY148_02125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY148_02125 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY148_02130 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY148_02135 PF01040 UbiA prenyltransferase family FY148_02140 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY148_02145 PF00510 Cytochrome c oxidase subunit III FY148_02155 PF02104 SURF1 family FY148_02160 PF02401 LytB protein FY148_02165 PF01636 Phosphotransferase enzyme family FY148_02170 PF00075 RNase H FY148_02180 PF08534 Redoxin FY148_02180 PF00462 Glutaredoxin FY148_02190 PF02622 Uncharacterized ACR, COG1678 FY148_02195 PF05532 CsbD-like FY148_02200 PF15887 Putative zinc-binding metallo-peptidase FY148_02200 PF10005 zinc-ribbon domain FY148_02205 PF13188 PAS domain FY148_02205 PF00990 Diguanylate cyclase, GGDEF domain FY148_02205 PF00563 EAL domain FY148_02205 PF03707 Bacterial signalling protein N terminal repeat FY148_02210 PF13302 Acetyltransferase (GNAT) domain FY148_02215 PF05193 Peptidase M16 inactive domain FY148_02215 PF00675 Insulinase (Peptidase family M16) FY148_02220 PF14821 Threonine synthase N terminus FY148_02220 PF00291 Pyridoxal-phosphate dependent enzyme FY148_02240 PF13419 Haloacid dehalogenase-like hydrolase FY148_02245 PF07729 FCD domain FY148_02245 PF00392 Bacterial regulatory proteins, gntR family FY148_02260 PF18755 Restriction Enzyme Adenine Methylase Associated FY148_02260 PF01555 DNA methylase FY148_02265 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY148_02270 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY148_02280 PF00730 HhH-GPD superfamily base excision DNA repair protein FY148_02280 PF14815 NUDIX domain FY148_02295 PF13462 Thioredoxin FY148_02300 PF02463 RecF/RecN/SMC N terminal domain FY148_02305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_02310 PF02896 PEP-utilising enzyme, TIM barrel domain FY148_02310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY148_02310 PF00391 PEP-utilising enzyme, mobile domain FY148_02325 PF00375 Sodium:dicarboxylate symporter family FY148_02355 PF06039 Malate:quinone oxidoreductase (Mqo) FY148_02375 PF00009 Elongation factor Tu GTP binding domain FY148_02380 PF01507 Phosphoadenosine phosphosulfate reductase family FY148_02385 PF01507 Phosphoadenosine phosphosulfate reductase family FY148_02390 PF02082 Transcriptional regulator FY148_02400 PF00528 Binding-protein-dependent transport system inner membrane component FY148_02405 PF00528 Binding-protein-dependent transport system inner membrane component FY148_02410 PF00005 ABC transporter FY148_02410 PF12857 TOBE-like domain FY148_02415 PF14765 Polyketide synthase dehydratase FY148_02415 PF00107 Zinc-binding dehydrogenase FY148_02415 PF16197 Ketoacyl-synthetase C-terminal extension FY148_02415 PF00550 Phosphopantetheine attachment site FY148_02415 PF08659 KR domain FY148_02415 PF02801 Beta-ketoacyl synthase, C-terminal domain FY148_02415 PF00109 Beta-ketoacyl synthase, N-terminal domain FY148_02415 PF00698 Acyl transferase domain FY148_02415 PF08240 Alcohol dehydrogenase GroES-like domain FY148_02420 PF00563 EAL domain FY148_02420 PF00990 Diguanylate cyclase, GGDEF domain FY148_02420 PF00989 PAS fold FY148_02420 PF01590 GAF domain FY148_02430 PF00440 Bacterial regulatory proteins, tetR family FY148_02430 PF13977 BetI-type transcriptional repressor, C-terminal FY148_02435 PF00171 Aldehyde dehydrogenase family FY148_02440 PF00732 GMC oxidoreductase FY148_02440 PF05199 GMC oxidoreductase FY148_02470 PF02798 Glutathione S-transferase, N-terminal domain FY148_02470 PF00043 Glutathione S-transferase, C-terminal domain FY148_02480 PF07690 Major Facilitator Superfamily FY148_02490 PF04675 DNA ligase N terminus FY148_02490 PF04679 ATP dependent DNA ligase C terminal region FY148_02490 PF01068 ATP dependent DNA ligase domain FY148_02500 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY148_02505 PF00403 Heavy-metal-associated domain FY148_02510 PF03734 L,D-transpeptidase catalytic domain FY148_02510 PF17969 L,D-transpeptidase C-terminal domain FY148_02515 PF03734 L,D-transpeptidase catalytic domain FY148_02515 PF17969 L,D-transpeptidase C-terminal domain FY148_02520 PF01047 MarR family FY148_02525 PF02566 OsmC-like protein FY148_02540 PF00005 ABC transporter FY148_02540 PF12848 ABC transporter FY148_02570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_02570 PF03466 LysR substrate binding domain FY148_02575 PF00106 short chain dehydrogenase FY148_02590 PF05872 Bacterial protein of unknown function (DUF853) FY148_02600 PF01638 HxlR-like helix-turn-helix FY148_02605 PF00106 short chain dehydrogenase FY148_02610 PF12833 Helix-turn-helix domain FY148_02620 PF00248 Aldo/keto reductase family FY148_02625 PF01062 Bestrophin, RFP-TM, chloride channel FY148_02630 PF13280 WYL domain FY148_02630 PF08279 HTH domain FY148_02645 PF01063 Amino-transferase class IV FY148_02650 PF00672 HAMP domain FY148_02650 PF02203 Tar ligand binding domain homologue FY148_02650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_02655 PF03466 LysR substrate binding domain FY148_02670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY148_02670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY148_02685 PF01810 LysE type translocator FY148_02690 PF01322 Cytochrome C' FY148_02695 PF00034 Cytochrome c FY148_02725 PF09278 MerR, DNA binding FY148_02725 PF00376 MerR family regulatory protein FY148_02735 PF02583 Metal-sensitive transcriptional repressor FY148_02750 PF00571 CBS domain FY148_02750 PF00005 ABC transporter FY148_02755 PF00528 Binding-protein-dependent transport system inner membrane component FY148_02770 PF00326 Prolyl oligopeptidase family FY148_02770 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY148_02780 PF00701 Dihydrodipicolinate synthetase family FY148_02790 PF02805 Metal binding domain of Ada FY148_02790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY148_02790 PF12833 Helix-turn-helix domain FY148_02790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY148_02795 PF01594 AI-2E family transporter FY148_02800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_02820 PF03006 Haemolysin-III related FY148_02830 PF01810 LysE type translocator FY148_02835 PF01641 SelR domain FY148_02840 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY148_02840 PF13244 Domain of unknown function (DUF4040) FY148_02840 PF00361 Proton-conducting membrane transporter FY148_02845 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY148_02850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY148_02855 PF00361 Proton-conducting membrane transporter FY148_02860 PF01899 Na+/H+ ion antiporter subunit FY148_02865 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY148_02870 PF03334 Na+/H+ antiporter subunit FY148_02875 PF05443 ROS/MUCR transcriptional regulator protein FY148_02890 PF02657 Fe-S metabolism associated domain FY148_02895 PF17264 Family of unknown function (DUF5330) FY148_02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_02900 PF00512 His Kinase A (phospho-acceptor) domain FY148_02935 PF01810 LysE type translocator FY148_02940 PF03466 LysR substrate binding domain FY148_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_02945 PF00912 Transglycosylase FY148_02945 PF00905 Penicillin binding protein transpeptidase domain FY148_02950 PF03692 Putative zinc- or iron-chelating domain FY148_02955 PF00905 Penicillin binding protein transpeptidase domain FY148_02960 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ FY148_02965 PF04221 RelB antitoxin FY148_02975 PF00403 Heavy-metal-associated domain FY148_02980 PF00376 MerR family regulatory protein FY148_02980 PF09278 MerR, DNA binding FY148_03005 PF07690 Major Facilitator Superfamily FY148_03010 PF08244 Glycosyl hydrolases family 32 C terminal FY148_03010 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY148_03015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY148_03025 PF01037 Lrp/AsnC ligand binding domain FY148_03025 PF13404 AsnC-type helix-turn-helix domain FY148_03065 PF04860 Phage portal protein FY148_03155 PF00072 Response regulator receiver domain FY148_03155 PF00486 Transcriptional regulatory protein, C terminal FY148_03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_03175 PF03100 CcmE FY148_03180 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY148_03180 PF01578 Cytochrome C assembly protein FY148_03185 PF03918 Cytochrome C biogenesis protein FY148_03190 PF13180 PDZ domain FY148_03195 PF00486 Transcriptional regulatory protein, C terminal FY148_03195 PF00072 Response regulator receiver domain FY148_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_03200 PF00512 His Kinase A (phospho-acceptor) domain FY148_03200 PF08448 PAS fold FY148_03200 PF13426 PAS domain FY148_03200 PF00072 Response regulator receiver domain FY148_03205 PF04134 Protein of unknown function, DUF393 FY148_03210 PF06629 MltA-interacting protein MipA FY148_03215 PF08335 GlnD PII-uridylyltransferase FY148_03215 PF03710 Glutamate-ammonia ligase adenylyltransferase FY148_03220 PF00512 His Kinase A (phospho-acceptor) domain FY148_03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_03220 PF00989 PAS fold FY148_03230 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY148_03230 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY148_03230 PF01433 Peptidase family M1 domain FY148_03235 PF00892 EamA-like transporter family FY148_03250 PF00012 Hsp70 protein FY148_03255 PF00990 Diguanylate cyclase, GGDEF domain FY148_03285 PF08240 Alcohol dehydrogenase GroES-like domain FY148_03285 PF00107 Zinc-binding dehydrogenase FY148_03290 PF01638 HxlR-like helix-turn-helix FY148_03295 PF02673 Bacitracin resistance protein BacA FY148_03300 PF00571 CBS domain FY148_03300 PF01769 Divalent cation transporter FY148_03300 PF03448 MgtE intracellular N domain FY148_03305 PF07690 Major Facilitator Superfamily FY148_03310 PF00781 Diacylglycerol kinase catalytic domain FY148_03315 PF00202 Aminotransferase class-III FY148_03330 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY148_03330 PF01048 Phosphorylase superfamily FY148_03355 PF00155 Aminotransferase class I and II FY148_03365 PF14759 Reductase C-terminal FY148_03365 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_03370 PF03328 HpcH/HpaI aldolase/citrate lyase family FY148_03385 PF02530 Porin subfamily FY148_03390 PF02530 Porin subfamily FY148_03395 PF01464 Transglycosylase SLT domain FY148_03395 PF14718 Soluble lytic murein transglycosylase L domain FY148_03400 PF00701 Dihydrodipicolinate synthetase family FY148_03405 PF01668 SmpB protein FY148_03410 PF00672 HAMP domain FY148_03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_03410 PF02203 Tar ligand binding domain homologue FY148_03420 PF01192 RNA polymerase Rpb6 FY148_03425 PF04607 Region found in RelA / SpoT proteins FY148_03425 PF02824 TGS domain FY148_03425 PF13291 ACT domain FY148_03440 PF01648 4'-phosphopantetheinyl transferase superfamily FY148_03445 PF10502 Signal peptidase, peptidase S26 FY148_03450 PF14622 Ribonuclease-III-like FY148_03450 PF00035 Double-stranded RNA binding motif FY148_03455 PF01926 50S ribosome-binding GTPase FY148_03455 PF07650 KH domain FY148_03465 PF00072 Response regulator receiver domain FY148_03470 PF02565 Recombination protein O C terminal FY148_03470 PF11967 Recombination protein O N terminal FY148_03475 PF07690 Major Facilitator Superfamily FY148_03480 PF08241 Methyltransferase domain FY148_03490 PF01966 HD domain FY148_03500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_03510 PF00005 ABC transporter FY148_03515 PF00528 Binding-protein-dependent transport system inner membrane component FY148_03520 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY148_03525 PF00924 Mechanosensitive ion channel FY148_03525 PF05552 Conserved TM helix FY148_03535 PF01966 HD domain FY148_03540 PF01571 Aminomethyltransferase folate-binding domain FY148_03560 PF00293 NUDIX domain FY148_03565 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY148_03575 PF00990 Diguanylate cyclase, GGDEF domain FY148_03575 PF00072 Response regulator receiver domain FY148_03580 PF01066 CDP-alcohol phosphatidyltransferase FY148_03585 PF02666 Phosphatidylserine decarboxylase FY148_03590 PF00005 ABC transporter FY148_03590 PF00664 ABC transporter transmembrane region FY148_03600 PF03641 Possible lysine decarboxylase FY148_03605 PF03717 Penicillin-binding Protein dimerisation domain FY148_03605 PF00905 Penicillin binding protein transpeptidase domain FY148_03610 PF00892 EamA-like transporter family FY148_03615 PF00561 alpha/beta hydrolase fold FY148_03630 PF04480 Protein of unknown function (DUF559) FY148_03635 PF01406 tRNA synthetases class I (C) catalytic domain FY148_03635 PF09190 DALR domain FY148_03640 PF00106 short chain dehydrogenase FY148_03645 PF00156 Phosphoribosyl transferase domain FY148_03645 PF13537 Glutamine amidotransferase domain FY148_03650 PF02674 Colicin V production protein FY148_03655 PF18073 Rubredoxin metal binding domain FY148_03655 PF06745 KaiC FY148_03670 PF01168 Alanine racemase, N-terminal domain FY148_03670 PF00842 Alanine racemase, C-terminal domain FY148_03675 PF12833 Helix-turn-helix domain FY148_03675 PF12852 Cupin FY148_03680 PF03591 AzlC protein FY148_03690 PF00772 DnaB-like helicase N terminal domain FY148_03690 PF03796 DnaB-like helicase C terminal domain FY148_03705 PF13533 Biotin-lipoyl like FY148_03710 PF01281 Ribosomal protein L9, N-terminal domain FY148_03710 PF03948 Ribosomal protein L9, C-terminal domain FY148_03720 PF01084 Ribosomal protein S18 FY148_03725 PF01250 Ribosomal protein S6 FY148_03735 PF00248 Aldo/keto reductase family FY148_03740 PF00698 Acyl transferase domain FY148_03750 PF00550 Phosphopantetheine attachment site FY148_03755 PF02801 Beta-ketoacyl synthase, C-terminal domain FY148_03755 PF00109 Beta-ketoacyl synthase, N-terminal domain FY148_03765 PF02618 YceG-like family FY148_03770 PF03755 YicC-like family, N-terminal region FY148_03770 PF08340 Domain of unknown function (DUF1732) FY148_03775 PF00625 Guanylate kinase FY148_03790 PF00398 Ribosomal RNA adenine dimethylase FY148_03795 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY148_03805 PF04453 LPS transport system D FY148_03805 PF03968 OstA-like protein FY148_03820 PF02789 Cytosol aminopeptidase family, N-terminal domain FY148_03820 PF00883 Cytosol aminopeptidase family, catalytic domain FY148_03830 PF00563 EAL domain FY148_03830 PF03707 Bacterial signalling protein N terminal repeat FY148_03830 PF00990 Diguanylate cyclase, GGDEF domain FY148_03835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_03840 PF01590 GAF domain FY148_03840 PF00563 EAL domain FY148_03840 PF00360 Phytochrome region FY148_03840 PF00990 Diguanylate cyclase, GGDEF domain FY148_03845 PF00563 EAL domain FY148_03845 PF00990 Diguanylate cyclase, GGDEF domain FY148_03845 PF03707 Bacterial signalling protein N terminal repeat FY148_03850 PF00989 PAS fold FY148_03850 PF00512 His Kinase A (phospho-acceptor) domain FY148_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_03855 PF00196 Bacterial regulatory proteins, luxR family FY148_03855 PF00072 Response regulator receiver domain FY148_03865 PF12848 ABC transporter FY148_03865 PF00005 ABC transporter FY148_03870 PF17158 Membrane-associated sensor, integral membrane domain FY148_03870 PF00990 Diguanylate cyclase, GGDEF domain FY148_03875 PF13417 Glutathione S-transferase, N-terminal domain FY148_03880 PF00334 Nucleoside diphosphate kinase FY148_03900 PF02391 MoaE protein FY148_03910 PF01066 CDP-alcohol phosphatidyltransferase FY148_03915 PF08459 UvrC Helix-hairpin-helix N-terminal FY148_03915 PF02151 UvrB/uvrC motif FY148_03915 PF01541 GIY-YIG catalytic domain FY148_03925 PF13505 Outer membrane protein beta-barrel domain FY148_03935 PF00445 Ribonuclease T2 family FY148_03945 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY148_03950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY148_03950 PF01568 Molydopterin dinucleotide binding domain FY148_03950 PF00384 Molybdopterin oxidoreductase FY148_03955 PF00293 NUDIX domain FY148_03975 PF00551 Formyl transferase FY148_03980 PF00586 AIR synthase related protein, N-terminal domain FY148_03980 PF02769 AIR synthase related protein, C-terminal domain FY148_03985 PF01209 ubiE/COQ5 methyltransferase family FY148_03990 PF01594 AI-2E family transporter FY148_04000 PF13090 Polyphosphate kinase C-terminal domain 2 FY148_04000 PF17941 Polyphosphate kinase C-terminal domain 1 FY148_04000 PF02503 Polyphosphate kinase middle domain FY148_04000 PF13089 Polyphosphate kinase N-terminal domain FY148_04005 PF02541 Ppx/GppA phosphatase family FY148_04010 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_04030 PF00211 Adenylate and Guanylate cyclase catalytic domain FY148_04040 PF01612 3'-5' exonuclease FY148_04040 PF00570 HRDC domain FY148_04045 PF07690 Major Facilitator Superfamily FY148_04050 PF02938 GAD domain FY148_04050 PF01336 OB-fold nucleic acid binding domain FY148_04050 PF00152 tRNA synthetases class II (D, K and N) FY148_04060 PF02203 Tar ligand binding domain homologue FY148_04060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_04060 PF00672 HAMP domain FY148_04065 PF00916 Sulfate permease family FY148_04065 PF01740 STAS domain FY148_04075 PF03989 DNA gyrase C-terminal domain, beta-propeller FY148_04075 PF00521 DNA gyrase/topoisomerase IV, subunit A FY148_04080 PF04377 Arginine-tRNA-protein transferase, C terminus FY148_04080 PF04376 Arginine-tRNA-protein transferase, N terminus FY148_04090 PF00490 Delta-aminolevulinic acid dehydratase FY148_04110 PF00464 Serine hydroxymethyltransferase FY148_04115 PF03477 ATP cone domain FY148_04120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY148_04120 PF01872 RibD C-terminal domain FY148_04125 PF00677 Lumazine binding domain FY148_04130 PF01810 LysE type translocator FY148_04135 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY148_04140 PF01029 NusB family FY148_04145 PF07690 Major Facilitator Superfamily FY148_04150 PF03030 Inorganic H+ pyrophosphatase FY148_04170 PF02504 Fatty acid synthesis protein FY148_04175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY148_04175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY148_04180 PF00216 Bacterial DNA-binding protein FY148_04185 PF13411 MerR HTH family regulatory protein FY148_04200 PF00403 Heavy-metal-associated domain FY148_04205 PF00111 2Fe-2S iron-sulfur cluster binding domain FY148_04205 PF00175 Oxidoreductase NAD-binding domain FY148_04205 PF00970 Oxidoreductase FAD-binding domain FY148_04210 PF00376 MerR family regulatory protein FY148_04210 PF09278 MerR, DNA binding FY148_04215 PF00528 Binding-protein-dependent transport system inner membrane component FY148_04220 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_04220 PF00528 Binding-protein-dependent transport system inner membrane component FY148_04225 PF00005 ABC transporter FY148_04225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_04230 PF00005 ABC transporter FY148_04230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_04235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_04245 PF02386 Cation transport protein FY148_04250 PF00291 Pyridoxal-phosphate dependent enzyme FY148_04250 PF00585 C-terminal regulatory domain of Threonine dehydratase FY148_04260 PF00990 Diguanylate cyclase, GGDEF domain FY148_04265 PF02525 Flavodoxin-like fold FY148_04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_04270 PF03466 LysR substrate binding domain FY148_04275 PF00149 Calcineurin-like phosphoesterase FY148_04275 PF02872 5'-nucleotidase, C-terminal domain FY148_04295 PF00581 Rhodanese-like domain FY148_04300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY148_04300 PF01411 tRNA synthetases class II (A) FY148_04300 PF02272 DHHA1 domain FY148_04305 PF00291 Pyridoxal-phosphate dependent enzyme FY148_04305 PF00571 CBS domain FY148_04310 PF00875 DNA photolyase FY148_04310 PF03441 FAD binding domain of DNA photolyase FY148_04320 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY148_04320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY148_04350 PF06055 Exopolysaccharide synthesis, ExoD FY148_04355 PF09335 SNARE associated Golgi protein FY148_04400 PF02397 Bacterial sugar transferase FY148_04405 PF00534 Glycosyl transferases group 1 FY148_04430 PF02628 Cytochrome oxidase assembly protein FY148_04435 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY148_04440 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY148_04445 PF00491 Arginase family FY148_04450 PF00380 Ribosomal protein S9/S16 FY148_04455 PF00572 Ribosomal protein L13 FY148_04465 PF13380 CoA binding domain FY148_04470 PF01053 Cys/Met metabolism PLP-dependent enzyme FY148_04495 PF00067 Cytochrome P450 FY148_04500 PF00990 Diguanylate cyclase, GGDEF domain FY148_04505 PF00574 Clp protease FY148_04510 PF06689 ClpX C4-type zinc finger FY148_04510 PF10431 C-terminal, D2-small domain, of ClpB protein FY148_04510 PF07724 AAA domain (Cdc48 subfamily) FY148_04515 PF05362 Lon protease (S16) C-terminal proteolytic domain FY148_04515 PF00004 ATPase family associated with various cellular activities (AAA) FY148_04515 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY148_04520 PF00216 Bacterial DNA-binding protein FY148_04525 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY148_04550 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY148_04555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY148_04560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY148_04570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY148_04585 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY148_04585 PF10531 SLBB domain FY148_04585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY148_04590 PF00384 Molybdopterin oxidoreductase FY148_04590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY148_04590 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY148_04595 PF00146 NADH dehydrogenase FY148_04600 PF12838 4Fe-4S dicluster domain FY148_04605 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY148_04610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY148_04615 PF00361 Proton-conducting membrane transporter FY148_04615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY148_04620 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY148_04620 PF00361 Proton-conducting membrane transporter FY148_04625 PF00361 Proton-conducting membrane transporter FY148_04630 PF03099 Biotin/lipoate A/B protein ligase family FY148_04630 PF02237 Biotin protein ligase C terminal domain FY148_04630 PF08279 HTH domain FY148_04635 PF17770 Ribonuclease J C-terminal domain FY148_04635 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY148_04635 PF12706 Beta-lactamase superfamily domain FY148_04645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY148_04645 PF03129 Anticodon binding domain FY148_04650 PF12704 MacB-like periplasmic core domain FY148_04650 PF02687 FtsX-like permease family FY148_04655 PF00005 ABC transporter FY148_04660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY148_04660 PF14579 Helix-hairpin-helix motif FY148_04660 PF02811 PHP domain FY148_04660 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY148_04670 PF00817 impB/mucB/samB family FY148_04670 PF11799 impB/mucB/samB family C-terminal domain FY148_04690 PF00072 Response regulator receiver domain FY148_04695 PF00072 Response regulator receiver domain FY148_04695 PF00990 Diguanylate cyclase, GGDEF domain FY148_04700 PF00471 Ribosomal protein L33 FY148_04705 PF07690 Major Facilitator Superfamily FY148_04720 PF17876 Cold shock domain FY148_04720 PF08461 Ribonuclease R winged-helix domain FY148_04720 PF08206 Ribonuclease B OB domain FY148_04720 PF00773 RNB domain FY148_04720 PF00575 S1 RNA binding domain FY148_04725 PF01131 DNA topoisomerase FY148_04725 PF01751 Toprim domain FY148_04725 PF13368 Topoisomerase C-terminal repeat FY148_04725 PF01396 Topoisomerase DNA binding C4 zinc finger FY148_04735 PF02481 DNA recombination-mediator protein A FY148_04735 PF17782 DprA winged helix domain FY148_04740 PF02660 Glycerol-3-phosphate acyltransferase FY148_04745 PF01979 Amidohydrolase family FY148_04750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY148_04750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY148_04765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_04765 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_04765 PF18158 Adaptive response protein AidB N-terminal domain FY148_04770 PF00583 Acetyltransferase (GNAT) family FY148_04790 PF03652 Holliday junction resolvase FY148_04795 PF03831 PhnA domain FY148_04795 PF08274 PhnA Zinc-Ribbon FY148_04805 PF02686 Glu-tRNAGln amidotransferase C subunit FY148_04810 PF01425 Amidase FY148_04815 PF00583 Acetyltransferase (GNAT) family FY148_04815 PF13673 Acetyltransferase (GNAT) domain FY148_04820 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY148_04835 PF02934 GatB/GatE catalytic domain FY148_04835 PF02637 GatB domain FY148_04845 PF00583 Acetyltransferase (GNAT) family FY148_04865 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY148_04870 PF02785 Biotin carboxylase C-terminal domain FY148_04870 PF00289 Biotin carboxylase, N-terminal domain FY148_04870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_04875 PF00364 Biotin-requiring enzyme FY148_04880 PF01220 Dehydroquinase class II FY148_04890 PF00155 Aminotransferase class I and II FY148_04915 PF12111 Polyribonucleotide phosphorylase C terminal FY148_04915 PF10150 Ribonuclease E/G family FY148_04915 PF00575 S1 RNA binding domain FY148_04920 PF01520 N-acetylmuramoyl-L-alanine amidase FY148_04925 PF00905 Penicillin binding protein transpeptidase domain FY148_04925 PF00912 Transglycosylase FY148_04925 PF17092 Penicillin-binding protein OB-like domain FY148_04945 PF01513 ATP-NAD kinase FY148_04950 PF02567 Phenazine biosynthesis-like protein FY148_04955 PF00009 Elongation factor Tu GTP binding domain FY148_04955 PF03764 Elongation factor G, domain IV FY148_04955 PF00679 Elongation factor G C-terminus FY148_04970 PF00111 2Fe-2S iron-sulfur cluster binding domain FY148_04980 PF00809 Pterin binding enzyme FY148_04985 PF02152 Dihydroneopterin aldolase FY148_04990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY148_05000 PF05128 Domain of unknown function (DUF697) FY148_05005 PF04317 YcjX-like family, DUF463 FY148_05015 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY148_05030 PF00072 Response regulator receiver domain FY148_05030 PF08448 PAS fold FY148_05030 PF13188 PAS domain FY148_05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_05030 PF00512 His Kinase A (phospho-acceptor) domain FY148_05035 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY148_05040 PF02861 Clp amino terminal domain, pathogenicity island component FY148_05040 PF00004 ATPase family associated with various cellular activities (AAA) FY148_05040 PF07724 AAA domain (Cdc48 subfamily) FY148_05040 PF17871 AAA lid domain FY148_05040 PF10431 C-terminal, D2-small domain, of ClpB protein FY148_05060 PF03466 LysR substrate binding domain FY148_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_05070 PF01230 HIT domain FY148_05095 PF00318 Ribosomal protein S2 FY148_05100 PF00889 Elongation factor TS FY148_05105 PF00696 Amino acid kinase family FY148_05110 PF01765 Ribosome recycling factor FY148_05115 PF01255 Putative undecaprenyl diphosphate synthase FY148_05125 PF17820 PDZ domain FY148_05125 PF02163 Peptidase family M50 FY148_05130 PF01103 Surface antigen FY148_05130 PF07244 Surface antigen variable number repeat FY148_05135 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY148_05135 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_05140 PF07977 FabA-like domain FY148_05145 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY148_05145 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_05150 PF06230 LpxI C-terminal domain FY148_05150 PF17930 LpxI N-terminal domain FY148_05155 PF02684 Lipid-A-disaccharide synthetase FY148_05160 PF07729 FCD domain FY148_05160 PF00392 Bacterial regulatory proteins, gntR family FY148_05165 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_05170 PF00528 Binding-protein-dependent transport system inner membrane component FY148_05175 PF00528 Binding-protein-dependent transport system inner membrane component FY148_05180 PF00005 ABC transporter FY148_05185 PF00285 Citrate synthase, C-terminal domain FY148_05200 PF00717 Peptidase S24-like FY148_05200 PF01726 LexA DNA binding domain FY148_05210 PF00793 DAHP synthetase I family FY148_05215 PF00113 Enolase, C-terminal TIM barrel domain FY148_05215 PF03952 Enolase, N-terminal domain FY148_05225 PF00676 Dehydrogenase E1 component FY148_05230 PF00364 Biotin-requiring enzyme FY148_05230 PF02779 Transketolase, pyrimidine binding domain FY148_05230 PF02780 Transketolase, C-terminal domain FY148_05235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY148_05235 PF00364 Biotin-requiring enzyme FY148_05235 PF02817 e3 binding domain FY148_05245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY148_05245 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_05255 PF04055 Radical SAM superfamily FY148_05255 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY148_05260 PF00892 EamA-like transporter family FY148_05275 PF03364 Polyketide cyclase / dehydrase and lipid transport FY148_05280 PF02464 Competence-damaged protein FY148_05280 PF18146 Damage-inducible protein CinA KH domain FY148_05280 PF00994 Probable molybdopterin binding domain FY148_05285 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY148_05285 PF02542 YgbB family FY148_05290 PF01207 Dihydrouridine synthase (Dus) FY148_05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_05295 PF00512 His Kinase A (phospho-acceptor) domain FY148_05295 PF00989 PAS fold FY148_05300 PF00158 Sigma-54 interaction domain FY148_05300 PF00072 Response regulator receiver domain FY148_05300 PF02954 Bacterial regulatory protein, Fis family FY148_05305 PF00672 HAMP domain FY148_05305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_05305 PF00512 His Kinase A (phospho-acceptor) domain FY148_05305 PF00989 PAS fold FY148_05310 PF02954 Bacterial regulatory protein, Fis family FY148_05310 PF00072 Response regulator receiver domain FY148_05310 PF00158 Sigma-54 interaction domain FY148_05315 PF02080 TrkA-C domain FY148_05315 PF02254 TrkA-N domain FY148_05320 PF17209 Hfq protein FY148_05325 PF01926 50S ribosome-binding GTPase FY148_05325 PF13167 GTP-binding GTPase N-terminal FY148_05325 PF16360 GTP-binding GTPase Middle Region FY148_05330 PF03819 MazG nucleotide pyrophosphohydrolase domain FY148_05340 PF10414 Sirohaem synthase dimerisation region FY148_05340 PF14824 Sirohaem biosynthesis protein central FY148_05340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_05360 PF00970 Oxidoreductase FAD-binding domain FY148_05360 PF00175 Oxidoreductase NAD-binding domain FY148_05380 PF02347 Glycine cleavage system P-protein FY148_05385 PF01597 Glycine cleavage H-protein FY148_05390 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY148_05390 PF01571 Aminomethyltransferase folate-binding domain FY148_05415 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY148_05420 PF00849 RNA pseudouridylate synthase FY148_05420 PF01479 S4 domain FY148_05425 PF13419 Haloacid dehalogenase-like hydrolase FY148_05440 PF01042 Endoribonuclease L-PSP FY148_05445 PF00756 Putative esterase FY148_05455 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY148_05470 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY148_05470 PF00578 AhpC/TSA family FY148_05475 PF00043 Glutathione S-transferase, C-terminal domain FY148_05475 PF02798 Glutathione S-transferase, N-terminal domain FY148_05490 PF03358 NADPH-dependent FMN reductase FY148_05495 PF03960 ArsC family FY148_05500 PF01758 Sodium Bile acid symporter family FY148_05505 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY148_05515 PF00654 Voltage gated chloride channel FY148_05520 PF03099 Biotin/lipoate A/B protein ligase family FY148_05520 PF12706 Beta-lactamase superfamily domain FY148_05525 PF01026 TatD related DNase FY148_05530 PF08264 Anticodon-binding domain of tRNA FY148_05530 PF09334 tRNA synthetases class I (M) FY148_05535 PF09115 DNA polymerase III, delta subunit, C terminal FY148_05540 PF02223 Thymidylate kinase FY148_05545 PF07943 Penicillin-binding protein 5, C-terminal domain FY148_05545 PF00768 D-alanyl-D-alanine carboxypeptidase FY148_05550 PF05036 Sporulation related domain FY148_05550 PF03330 Lytic transglycolase FY148_05595 PF03989 DNA gyrase C-terminal domain, beta-propeller FY148_05595 PF00521 DNA gyrase/topoisomerase IV, subunit A FY148_05600 PF01914 MarC family integral membrane protein FY148_05605 PF00571 CBS domain FY148_05605 PF01743 Poly A polymerase head domain FY148_05615 PF00436 Single-strand binding protein family FY148_05620 PF17755 UvrA DNA-binding domain FY148_05620 PF17760 UvrA interaction domain FY148_05630 PF01207 Dihydrouridine synthase (Dus) FY148_05635 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY148_05640 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_05650 PF00950 ABC 3 transport family FY148_05655 PF00005 ABC transporter FY148_05660 PF01297 Zinc-uptake complex component A periplasmic FY148_05665 PF00356 Bacterial regulatory proteins, lacI family FY148_05675 PF00248 Aldo/keto reductase family FY148_05685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY148_05685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY148_05690 PF03597 Cytochrome oxidase maturation protein cbb3-type FY148_05700 PF05751 FixH FY148_05705 PF13746 4Fe-4S dicluster domain FY148_05705 PF12801 4Fe-4S binding domain FY148_05705 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY148_05725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY148_05725 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY148_05740 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY148_05745 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY148_05765 PF00376 MerR family regulatory protein FY148_05765 PF09278 MerR, DNA binding FY148_05770 PF03448 MgtE intracellular N domain FY148_05770 PF00571 CBS domain FY148_05770 PF01769 Divalent cation transporter FY148_05775 PF00384 Molybdopterin oxidoreductase FY148_05785 PF01327 Polypeptide deformylase FY148_05795 PF00989 PAS fold FY148_05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_05795 PF00512 His Kinase A (phospho-acceptor) domain FY148_05805 PF03099 Biotin/lipoate A/B protein ligase family FY148_05810 PF08240 Alcohol dehydrogenase GroES-like domain FY148_05810 PF00107 Zinc-binding dehydrogenase FY148_05835 PF07549 SecD/SecF GG Motif FY148_05835 PF02355 Protein export membrane protein FY148_05840 PF02699 Preprotein translocase subunit FY148_05850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY148_05850 PF08240 Alcohol dehydrogenase GroES-like domain FY148_05855 PF00440 Bacterial regulatory proteins, tetR family FY148_05855 PF08360 QacR-like protein, C-terminal region FY148_05860 PF00067 Cytochrome P450 FY148_05870 PF06426 Serine acetyltransferase, N-terminal FY148_05870 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_05875 PF00561 alpha/beta hydrolase fold FY148_05885 PF01494 FAD binding domain FY148_05890 PF01053 Cys/Met metabolism PLP-dependent enzyme FY148_05895 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_05900 PF00528 Binding-protein-dependent transport system inner membrane component FY148_05905 PF00528 Binding-protein-dependent transport system inner membrane component FY148_05910 PF00005 ABC transporter FY148_05920 PF17768 RecJ OB domain FY148_05920 PF02272 DHHA1 domain FY148_05920 PF01368 DHH family FY148_05930 PF01842 ACT domain FY148_05930 PF03447 Homoserine dehydrogenase, NAD binding domain FY148_05930 PF00742 Homoserine dehydrogenase FY148_05935 PF00155 Aminotransferase class I and II FY148_05940 PF01156 Inosine-uridine preferring nucleoside hydrolase FY148_05945 PF01925 Sulfite exporter TauE/SafE FY148_05960 PF08240 Alcohol dehydrogenase GroES-like domain FY148_05960 PF00107 Zinc-binding dehydrogenase FY148_05965 PF00109 Beta-ketoacyl synthase, N-terminal domain FY148_05965 PF02801 Beta-ketoacyl synthase, C-terminal domain FY148_05975 PF07977 FabA-like domain FY148_05980 PF00550 Phosphopantetheine attachment site FY148_05985 PF04055 Radical SAM superfamily FY148_05990 PF00027 Cyclic nucleotide-binding domain FY148_05990 PF13545 Crp-like helix-turn-helix domain FY148_06000 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY148_06005 PF17746 SfsA N-terminal OB domain FY148_06005 PF03749 Sugar fermentation stimulation protein RE domain FY148_06010 PF00557 Metallopeptidase family M24 FY148_06015 PF04002 RadC-like JAB domain FY148_06030 PF01474 Class-II DAHP synthetase family FY148_06045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY148_06045 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_06055 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY148_06060 PF13419 Haloacid dehalogenase-like hydrolase FY148_06070 PF00206 Lyase FY148_06070 PF10415 Fumarase C C-terminus FY148_06080 PF06418 CTP synthase N-terminus FY148_06080 PF00117 Glutamine amidotransferase class-I FY148_06085 PF03840 Preprotein translocase SecG subunit FY148_06090 PF00121 Triosephosphate isomerase FY148_06100 PF00204 DNA gyrase B FY148_06100 PF00986 DNA gyrase B subunit, carboxyl terminus FY148_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_06100 PF01751 Toprim domain FY148_06105 PF01370 NAD dependent epimerase/dehydratase family FY148_06110 PF00574 Clp protease FY148_06120 PF01022 Bacterial regulatory protein, arsR family FY148_06125 PF13091 PLD-like domain FY148_06130 PF00072 Response regulator receiver domain FY148_06135 PF01266 FAD dependent oxidoreductase FY148_06135 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY148_06135 PF01571 Aminomethyltransferase folate-binding domain FY148_06135 PF16350 FAD dependent oxidoreductase central domain FY148_06145 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY148_06145 PF12795 Mechanosensitive ion channel porin domain FY148_06145 PF00924 Mechanosensitive ion channel FY148_06205 PF00005 ABC transporter FY148_06210 PF02405 Permease MlaE FY148_06215 PF13378 Enolase C-terminal domain-like FY148_06215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_06225 PF00390 Malic enzyme, N-terminal domain FY148_06225 PF03949 Malic enzyme, NAD binding domain FY148_06225 PF01515 Phosphate acetyl/butaryl transferase FY148_06235 PF00881 Nitroreductase family FY148_06240 PF07676 WD40-like Beta Propeller Repeat FY148_06250 PF00795 Carbon-nitrogen hydrolase FY148_06250 PF02540 NAD synthase FY148_06255 PF00884 Sulfatase FY148_06265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY148_06265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_06280 PF05698 Bacterial trigger factor protein (TF) C-terminus FY148_06280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY148_06280 PF05697 Bacterial trigger factor protein (TF) FY148_06300 PF01134 Glucose inhibited division protein A FY148_06320 PF08240 Alcohol dehydrogenase GroES-like domain FY148_06320 PF00107 Zinc-binding dehydrogenase FY148_06330 PF00550 Phosphopantetheine attachment site FY148_06335 PF00501 AMP-binding enzyme FY148_06335 PF13193 AMP-binding enzyme C-terminal domain FY148_06345 PF04715 Anthranilate synthase component I, N terminal region FY148_06345 PF00425 chorismate binding enzyme FY148_06345 PF00117 Glutamine amidotransferase class-I FY148_06350 PF01702 Queuine tRNA-ribosyltransferase FY148_06355 PF02547 Queuosine biosynthesis protein FY148_06360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY148_06365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY148_06370 PF01467 Cytidylyltransferase-like FY148_06385 PF02885 Glycosyl transferase family, helical bundle domain FY148_06385 PF00591 Glycosyl transferase family, a/b domain FY148_06390 PF00218 Indole-3-glycerol phosphate synthase FY148_06395 PF01967 MoaC family FY148_06400 PF00994 Probable molybdopterin binding domain FY148_06400 PF03454 MoeA C-terminal region (domain IV) FY148_06400 PF03453 MoeA N-terminal region (domain I and II) FY148_06405 PF17158 Membrane-associated sensor, integral membrane domain FY148_06405 PF00990 Diguanylate cyclase, GGDEF domain FY148_06415 PF00999 Sodium/hydrogen exchanger family FY148_06415 PF02254 TrkA-N domain FY148_06425 PF04055 Radical SAM superfamily FY148_06425 PF06463 Molybdenum Cofactor Synthesis C FY148_06435 PF07690 Major Facilitator Superfamily FY148_06440 PF12804 MobA-like NTP transferase domain FY148_06445 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY148_06450 PF01551 Peptidase family M23 FY148_06460 PF01975 Survival protein SurE FY148_06465 PF02403 Seryl-tRNA synthetase N-terminal domain FY148_06465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY148_06470 PF00902 Sec-independent protein translocase protein (TatC) FY148_06475 PF02416 mttA/Hcf106 family FY148_06480 PF02416 mttA/Hcf106 family FY148_06485 PF04079 Segregation and condensation complex subunit ScpB FY148_06490 PF02616 Segregation and condensation protein ScpA FY148_06495 PF00933 Glycosyl hydrolase family 3 N terminal domain FY148_06505 PF03485 Arginyl tRNA synthetase N terminal domain FY148_06505 PF05746 DALR anticodon binding domain FY148_06505 PF00750 tRNA synthetases class I (R) FY148_06510 PF01966 HD domain FY148_06510 PF13286 Phosphohydrolase-associated domain FY148_06515 PF01521 Iron-sulphur cluster biosynthesis FY148_06525 PF08238 Sel1 repeat FY148_06535 PF08264 Anticodon-binding domain of tRNA FY148_06535 PF10458 Valyl tRNA synthetase tRNA binding arm FY148_06535 PF00133 tRNA synthetases class I (I, L, M and V) FY148_06790 PF08299 Bacterial dnaA protein helix-turn-helix FY148_06790 PF11638 DnaA N-terminal domain FY148_06790 PF00308 Bacterial dnaA protein FY148_06800 PF00149 Calcineurin-like phosphoesterase FY148_06810 PF00145 C-5 cytosine-specific DNA methylase FY148_06815 PF00772 DnaB-like helicase N terminal domain FY148_06815 PF03796 DnaB-like helicase C terminal domain FY148_06815 PF14528 LAGLIDADG-like domain FY148_06980 PF02899 Phage integrase, N-terminal SAM-like domain FY148_06980 PF00589 Phage integrase family FY148_07005 PF03358 NADPH-dependent FMN reductase FY148_07010 PF18146 Damage-inducible protein CinA KH domain FY148_07010 PF00994 Probable molybdopterin binding domain FY148_07010 PF02464 Competence-damaged protein FY148_07015 PF00582 Universal stress protein family FY148_07020 PF00156 Phosphoribosyl transferase domain FY148_07030 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY148_07030 PF02867 Ribonucleotide reductase, barrel domain FY148_07055 PF10137 Predicted nucleotide-binding protein containing TIR-like domain FY148_07090 PF00303 Thymidylate synthase FY148_07110 PF03793 PASTA domain FY148_07110 PF00069 Protein kinase domain FY148_07120 PF07690 Major Facilitator Superfamily FY148_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_07135 PF03466 LysR substrate binding domain FY148_07140 PF00004 ATPase family associated with various cellular activities (AAA) FY148_07140 PF17862 AAA+ lid domain FY148_07140 PF01434 Peptidase family M41 FY148_07210 PF01566 Natural resistance-associated macrophage protein FY148_07220 PF00664 ABC transporter transmembrane region FY148_07220 PF00005 ABC transporter FY148_07225 PF01594 AI-2E family transporter FY148_07230 PF00583 Acetyltransferase (GNAT) family FY148_07260 PF03129 Anticodon binding domain FY148_07260 PF02824 TGS domain FY148_07260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY148_07260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY148_07270 PF01809 Putative membrane protein insertion efficiency factor FY148_07280 PF01227 GTP cyclohydrolase I FY148_07285 PF01502 Phosphoribosyl-AMP cyclohydrolase FY148_07290 PF01734 Patatin-like phospholipase FY148_07300 PF00571 CBS domain FY148_07300 PF00478 IMP dehydrogenase / GMP reductase domain FY148_07335 PF03315 Serine dehydratase beta chain FY148_07335 PF03313 Serine dehydratase alpha chain FY148_07375 PF03466 LysR substrate binding domain FY148_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_07385 PF12833 Helix-turn-helix domain FY148_07385 PF01965 DJ-1/PfpI family FY148_07390 PF01256 Carbohydrate kinase FY148_07390 PF03853 YjeF-related protein N-terminus FY148_07400 PF00543 Nitrogen regulatory protein P-II FY148_07405 PF00120 Glutamine synthetase, catalytic domain FY148_07405 PF03951 Glutamine synthetase, beta-Grasp domain FY148_07415 PF08755 Hemimethylated DNA-binding protein YccV like FY148_07425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_07435 PF00892 EamA-like transporter family FY148_07445 PF00270 DEAD/DEAH box helicase FY148_07445 PF00271 Helicase conserved C-terminal domain FY148_07445 PF03461 TRCF domain FY148_07445 PF17757 UvrB interaction domain FY148_07445 PF02559 CarD-like/TRCF domain FY148_07455 PF00270 DEAD/DEAH box helicase FY148_07455 PF00271 Helicase conserved C-terminal domain FY148_07455 PF17191 RecG wedge domain FY148_07470 PF01850 PIN domain FY148_07485 PF01380 SIS domain FY148_07490 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_07490 PF14602 Hexapeptide repeat of succinyl-transferase FY148_07490 PF12804 MobA-like NTP transferase domain FY148_07495 PF07729 FCD domain FY148_07495 PF00392 Bacterial regulatory proteins, gntR family FY148_07500 PF02608 ABC transporter substrate-binding protein PnrA-like FY148_07505 PF02653 Branched-chain amino acid transport system / permease component FY148_07510 PF02653 Branched-chain amino acid transport system / permease component FY148_07515 PF00005 ABC transporter FY148_07525 PF01494 FAD binding domain FY148_07530 PF03547 Membrane transport protein FY148_07535 PF02683 Cytochrome C biogenesis protein transmembrane region FY148_07555 PF00313 'Cold-shock' DNA-binding domain FY148_07605 PF12704 MacB-like periplasmic core domain FY148_07605 PF00005 ABC transporter FY148_07605 PF02687 FtsX-like permease family FY148_07610 PF00005 ABC transporter FY148_07610 PF02687 FtsX-like permease family FY148_07610 PF12704 MacB-like periplasmic core domain FY148_07630 PF01521 Iron-sulphur cluster biosynthesis FY148_07635 PF01883 Iron-sulfur cluster assembly protein FY148_07640 PF00266 Aminotransferase class-V FY148_07645 PF01458 Uncharacterized protein family (UPF0051) FY148_07650 PF00005 ABC transporter FY148_07655 PF01458 Uncharacterized protein family (UPF0051) FY148_07660 PF00266 Aminotransferase class-V FY148_07665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY148_07670 PF03702 Anhydro-N-acetylmuramic acid kinase FY148_07675 PF00579 tRNA synthetases class I (W and Y) FY148_07685 PF00578 AhpC/TSA family FY148_07690 PF04305 Protein of unknown function (DUF455) FY148_07695 PF01551 Peptidase family M23 FY148_07695 PF01476 LysM domain FY148_07695 PF08525 Opacity-associated protein A N-terminal motif FY148_07700 PF00270 DEAD/DEAH box helicase FY148_07700 PF00271 Helicase conserved C-terminal domain FY148_07715 PF00834 Ribulose-phosphate 3 epimerase family FY148_07725 PF00206 Lyase FY148_07725 PF10397 Adenylosuccinate lyase C-terminus FY148_07735 PF01259 SAICAR synthetase FY148_07740 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY148_07760 PF00155 Aminotransferase class I and II FY148_07760 PF00392 Bacterial regulatory proteins, gntR family FY148_07765 PF02769 AIR synthase related protein, C-terminal domain FY148_07765 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY148_07765 PF00586 AIR synthase related protein, N-terminal domain FY148_07785 PF00462 Glutaredoxin FY148_07790 PF07690 Major Facilitator Superfamily FY148_07930 PF03237 Terminase-like family FY148_07935 PF06074 Protein of unknown function (DUF935) FY148_07960 PF10124 Mu-like prophage major head subunit gpT FY148_07980 PF07030 Protein of unknown function (DUF1320) FY148_08035 PF04865 Baseplate J-like protein FY148_08060 PF00459 Inositol monophosphatase family FY148_08065 PF00459 Inositol monophosphatase family FY148_08070 PF01171 PP-loop family FY148_08075 PF04960 Glutaminase FY148_08080 PF00163 Ribosomal protein S4/S9 N-terminal domain FY148_08080 PF01479 S4 domain FY148_08085 PF03741 Integral membrane protein TerC family FY148_08095 PF00892 EamA-like transporter family FY148_08100 PF01810 LysE type translocator FY148_08110 PF01177 Asp/Glu/Hydantoin racemase FY148_08115 PF00588 SpoU rRNA Methylase family FY148_08125 PF00180 Isocitrate/isopropylmalate dehydrogenase FY148_08135 PF01411 tRNA synthetases class II (A) FY148_08135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY148_08135 PF02272 DHHA1 domain FY148_08140 PF00154 recA bacterial DNA recombination protein FY148_08145 PF00294 pfkB family carbohydrate kinase FY148_08150 PF04227 Indigoidine synthase A like protein FY148_08155 PF01389 OmpA-like transmembrane domain FY148_08155 PF00691 OmpA family FY148_08160 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_08165 PF00528 Binding-protein-dependent transport system inner membrane component FY148_08170 PF00528 Binding-protein-dependent transport system inner membrane component FY148_08175 PF06233 Usg-like family FY148_08180 PF08241 Methyltransferase domain FY148_08185 PF09084 NMT1/THI5 like FY148_08190 PF01037 Lrp/AsnC ligand binding domain FY148_08190 PF13404 AsnC-type helix-turn-helix domain FY148_08195 PF03167 Uracil DNA glycosylase superfamily FY148_08205 PF00512 His Kinase A (phospho-acceptor) domain FY148_08205 PF00989 PAS fold FY148_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_08210 PF01219 Prokaryotic diacylglycerol kinase FY148_08215 PF02277 Phosphoribosyltransferase FY148_08220 PF02654 Cobalamin-5-phosphate synthase FY148_08235 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY148_08240 PF01061 ABC-2 type transporter FY148_08245 PF00005 ABC transporter FY148_08250 PF01925 Sulfite exporter TauE/SafE FY148_08260 PF08269 Cache domain FY148_08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_08270 PF00004 ATPase family associated with various cellular activities (AAA) FY148_08270 PF16193 AAA C-terminal domain FY148_08270 PF12002 MgsA AAA+ ATPase C terminal FY148_08275 PF13180 PDZ domain FY148_08275 PF00595 PDZ domain FY148_08295 PF00920 Dehydratase family FY148_08300 PF00174 Oxidoreductase molybdopterin binding domain FY148_08305 PF01794 Ferric reductase like transmembrane component FY148_08315 PF05675 Protein of unknown function (DUF817) FY148_08325 PF01196 Ribosomal protein L17 FY148_08330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY148_08330 PF01000 RNA polymerase Rpb3/RpoA insert domain FY148_08330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY148_08335 PF00411 Ribosomal protein S11 FY148_08340 PF00416 Ribosomal protein S13/S18 FY148_08350 PF00344 SecY translocase FY148_08355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY148_08360 PF00327 Ribosomal protein L30p/L7e FY148_08365 PF00333 Ribosomal protein S5, N-terminal domain FY148_08365 PF03719 Ribosomal protein S5, C-terminal domain FY148_08370 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY148_08375 PF00347 Ribosomal protein L6 FY148_08380 PF00410 Ribosomal protein S8 FY148_08385 PF00253 Ribosomal protein S14p/S29e FY148_08390 PF00281 Ribosomal protein L5 FY148_08390 PF00673 ribosomal L5P family C-terminus FY148_08395 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY148_08395 PF00467 KOW motif FY148_08400 PF00238 Ribosomal protein L14p/L23e FY148_08405 PF00366 Ribosomal protein S17 FY148_08410 PF00831 Ribosomal L29 protein FY148_08415 PF00252 Ribosomal protein L16p/L10e FY148_08420 PF07650 KH domain FY148_08420 PF00189 Ribosomal protein S3, C-terminal domain FY148_08425 PF00237 Ribosomal protein L22p/L17e FY148_08430 PF00203 Ribosomal protein S19 FY148_08435 PF00181 Ribosomal Proteins L2, RNA binding domain FY148_08435 PF03947 Ribosomal Proteins L2, C-terminal domain FY148_08440 PF00276 Ribosomal protein L23 FY148_08445 PF00573 Ribosomal protein L4/L1 family FY148_08450 PF00297 Ribosomal protein L3 FY148_08455 PF00338 Ribosomal protein S10p/S20e FY148_08460 PF00009 Elongation factor Tu GTP binding domain FY148_08460 PF03143 Elongation factor Tu C-terminal domain FY148_08460 PF03144 Elongation factor Tu domain 2 FY148_08465 PF03764 Elongation factor G, domain IV FY148_08465 PF00009 Elongation factor Tu GTP binding domain FY148_08465 PF03144 Elongation factor Tu domain 2 FY148_08465 PF00679 Elongation factor G C-terminus FY148_08465 PF14492 Elongation Factor G, domain II FY148_08470 PF00177 Ribosomal protein S7p/S5e FY148_08475 PF00164 Ribosomal protein S12/S23 FY148_08495 PF05000 RNA polymerase Rpb1, domain 4 FY148_08495 PF04998 RNA polymerase Rpb1, domain 5 FY148_08495 PF00623 RNA polymerase Rpb1, domain 2 FY148_08495 PF04983 RNA polymerase Rpb1, domain 3 FY148_08495 PF04997 RNA polymerase Rpb1, domain 1 FY148_08500 PF04563 RNA polymerase beta subunit FY148_08500 PF04561 RNA polymerase Rpb2, domain 2 FY148_08500 PF04565 RNA polymerase Rpb2, domain 3 FY148_08500 PF10385 RNA polymerase beta subunit external 1 domain FY148_08500 PF00562 RNA polymerase Rpb2, domain 6 FY148_08500 PF04560 RNA polymerase Rpb2, domain 7 FY148_08505 PF00542 Ribosomal protein L7/L12 C-terminal domain FY148_08505 PF16320 Ribosomal protein L7/L12 dimerisation domain FY148_08510 PF00466 Ribosomal protein L10 FY148_08515 PF00687 Ribosomal protein L1p/L10e family FY148_08520 PF00298 Ribosomal protein L11, RNA binding domain FY148_08520 PF03946 Ribosomal protein L11, N-terminal domain FY148_08525 PF02357 Transcription termination factor nusG FY148_08525 PF00467 KOW motif FY148_08530 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY148_08540 PF02719 Polysaccharide biosynthesis protein FY148_08540 PF08485 Polysaccharide biosynthesis protein C-terminal FY148_08545 PF03143 Elongation factor Tu C-terminal domain FY148_08545 PF03144 Elongation factor Tu domain 2 FY148_08545 PF00009 Elongation factor Tu GTP binding domain FY148_08550 PF03741 Integral membrane protein TerC family FY148_08555 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY148_08575 PF00005 ABC transporter FY148_08575 PF00664 ABC transporter transmembrane region FY148_08615 PF04542 Sigma-70 region 2 FY148_08615 PF04545 Sigma-70, region 4 FY148_08625 PF02954 Bacterial regulatory protein, Fis family FY148_08625 PF00158 Sigma-54 interaction domain FY148_08625 PF00072 Response regulator receiver domain FY148_08630 PF00072 Response regulator receiver domain FY148_08630 PF08769 Sporulation initiation factor Spo0A C terminal FY148_08635 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_08635 PF00512 His Kinase A (phospho-acceptor) domain FY148_08635 PF01627 Hpt domain FY148_08635 PF00072 Response regulator receiver domain FY148_08640 PF00072 Response regulator receiver domain FY148_08645 PF13426 PAS domain FY148_08645 PF08447 PAS fold FY148_08645 PF07536 HWE histidine kinase FY148_08650 PF00072 Response regulator receiver domain FY148_08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_08655 PF01590 GAF domain FY148_08655 PF00512 His Kinase A (phospho-acceptor) domain FY148_08655 PF08446 PAS fold FY148_08655 PF00360 Phytochrome region FY148_08670 PF00588 SpoU rRNA Methylase family FY148_08670 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY148_08675 PF03061 Thioesterase superfamily FY148_08695 PF13460 NAD(P)H-binding FY148_08700 PF01638 HxlR-like helix-turn-helix FY148_08715 PF12344 Ultra-violet resistance protein B FY148_08715 PF00271 Helicase conserved C-terminal domain FY148_08715 PF04851 Type III restriction enzyme, res subunit FY148_08715 PF02151 UvrB/uvrC motif FY148_08715 PF17757 UvrB interaction domain FY148_08725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY148_08725 PF00756 Putative esterase FY148_08745 PF00684 DnaJ central domain FY148_08745 PF01556 DnaJ C terminal domain FY148_08745 PF00226 DnaJ domain FY148_08765 PF00990 Diguanylate cyclase, GGDEF domain FY148_08765 PF17151 Periplasmic sensor domain FY148_08775 PF08402 TOBE domain FY148_08775 PF00005 ABC transporter FY148_08785 PF01547 Bacterial extracellular solute-binding protein FY148_08790 PF00155 Aminotransferase class I and II FY148_08795 PF05025 RbsD / FucU transport protein family FY148_08805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY148_08805 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY148_08810 PF00440 Bacterial regulatory proteins, tetR family FY148_08815 PF06719 AraC-type transcriptional regulator N-terminus FY148_08815 PF12833 Helix-turn-helix domain FY148_08820 PF08240 Alcohol dehydrogenase GroES-like domain FY148_08820 PF00107 Zinc-binding dehydrogenase FY148_08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_08830 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY148_08840 PF14490 Helix-hairpin-helix containing domain FY148_08840 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY148_08840 PF13538 UvrD-like helicase C-terminal domain FY148_08860 PF08281 Sigma-70, region 4 FY148_08860 PF04542 Sigma-70 region 2 FY148_08875 PF00248 Aldo/keto reductase family FY148_08890 PF10369 Small subunit of acetolactate synthase FY148_08895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY148_08895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY148_08895 PF00205 Thiamine pyrophosphate enzyme, central domain FY148_08920 PF13302 Acetyltransferase (GNAT) domain FY148_08930 PF13180 PDZ domain FY148_08935 PF01145 SPFH domain / Band 7 family FY148_08940 PF01145 SPFH domain / Band 7 family FY148_08945 PF00186 Dihydrofolate reductase FY148_08950 PF00303 Thymidylate synthase FY148_08985 PF02913 FAD linked oxidases, C-terminal domain FY148_08985 PF01565 FAD binding domain FY148_08990 PF00873 AcrB/AcrD/AcrF family FY148_08995 PF13533 Biotin-lipoyl like FY148_09005 PF13361 UvrD-like helicase C-terminal domain FY148_09005 PF00580 UvrD/REP helicase N-terminal domain FY148_09030 PF00857 Isochorismatase family FY148_09050 PF01321 Creatinase/Prolidase N-terminal domain FY148_09050 PF00557 Metallopeptidase family M24 FY148_09060 PF02630 SCO1/SenC FY148_09070 PF01584 CheW-like domain FY148_09080 PF00929 Exonuclease FY148_09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_09085 PF03466 LysR substrate binding domain FY148_09095 PF00583 Acetyltransferase (GNAT) family FY148_09100 PF01636 Phosphotransferase enzyme family FY148_09105 PF01653 NAD-dependent DNA ligase adenylation domain FY148_09105 PF00533 BRCA1 C Terminus (BRCT) domain FY148_09105 PF12826 Helix-hairpin-helix motif FY148_09105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY148_09105 PF03120 NAD-dependent DNA ligase OB-fold domain FY148_09110 PF02463 RecF/RecN/SMC N terminal domain FY148_09115 PF13525 Outer membrane lipoprotein FY148_09120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY148_09125 PF00091 Tubulin/FtsZ family, GTPase domain FY148_09125 PF12327 FtsZ family, C-terminal domain FY148_09130 PF02491 SHS2 domain inserted in FTSA FY148_09135 PF08478 POTRA domain, FtsQ-type FY148_09135 PF03799 Cell division protein FtsQ FY148_09140 PF07478 D-ala D-ala ligase C-terminus FY148_09140 PF01820 D-ala D-ala ligase N-terminus FY148_09145 PF07690 Major Facilitator Superfamily FY148_09145 PF00083 Sugar (and other) transporter FY148_09150 PF00563 EAL domain FY148_09150 PF00990 Diguanylate cyclase, GGDEF domain FY148_09155 PF01565 FAD binding domain FY148_09155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY148_09160 PF01225 Mur ligase family, catalytic domain FY148_09160 PF02875 Mur ligase family, glutamate ligase domain FY148_09160 PF08245 Mur ligase middle domain FY148_09165 PF04101 Glycosyltransferase family 28 C-terminal domain FY148_09165 PF03033 Glycosyltransferase family 28 N-terminal domain FY148_09170 PF01098 Cell cycle protein FY148_09175 PF08245 Mur ligase middle domain FY148_09175 PF02875 Mur ligase family, glutamate ligase domain FY148_09180 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY148_09180 PF00953 Glycosyl transferase family 4 FY148_09185 PF02875 Mur ligase family, glutamate ligase domain FY148_09185 PF08245 Mur ligase middle domain FY148_09185 PF01225 Mur ligase family, catalytic domain FY148_09190 PF01225 Mur ligase family, catalytic domain FY148_09190 PF08245 Mur ligase middle domain FY148_09190 PF02875 Mur ligase family, glutamate ligase domain FY148_09195 PF03717 Penicillin-binding Protein dimerisation domain FY148_09195 PF00905 Penicillin binding protein transpeptidase domain FY148_09205 PF01795 MraW methylase family FY148_09210 PF02381 MraZ protein, putative antitoxin-like FY148_09235 PF01510 N-acetylmuramoyl-L-alanine amidase FY148_09240 PF00226 DnaJ domain FY148_09240 PF05099 Tellurite resistance protein TerB FY148_09245 PF00365 Phosphofructokinase FY148_09265 PF13649 Methyltransferase domain FY148_09270 PF01183 Glycosyl hydrolases family 25 FY148_09280 PF02219 Methylenetetrahydrofolate reductase FY148_09285 PF01209 ubiE/COQ5 methyltransferase family FY148_09290 PF12848 ABC transporter FY148_09290 PF00005 ABC transporter FY148_09295 PF12146 Serine aminopeptidase, S33 FY148_09300 PF02515 CoA-transferase family III FY148_09305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY148_09305 PF00205 Thiamine pyrophosphate enzyme, central domain FY148_09305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY148_09315 PF01042 Endoribonuclease L-PSP FY148_09330 PF03734 L,D-transpeptidase catalytic domain FY148_09330 PF01476 LysM domain FY148_09335 PF07690 Major Facilitator Superfamily FY148_09355 PF10609 NUBPL iron-transfer P-loop NTPase FY148_09360 PF00465 Iron-containing alcohol dehydrogenase FY148_09365 PF00171 Aldehyde dehydrogenase family FY148_09370 PF03951 Glutamine synthetase, beta-Grasp domain FY148_09370 PF00120 Glutamine synthetase, catalytic domain FY148_09375 PF13520 Amino acid permease FY148_09385 PF01380 SIS domain FY148_09385 PF01418 Helix-turn-helix domain, rpiR family FY148_09390 PF13416 Bacterial extracellular solute-binding protein FY148_09405 PF00005 ABC transporter FY148_09405 PF08402 TOBE domain FY148_09410 PF00107 Zinc-binding dehydrogenase FY148_09410 PF08240 Alcohol dehydrogenase GroES-like domain FY148_09425 PF07690 Major Facilitator Superfamily FY148_09430 PF00809 Pterin binding enzyme FY148_09430 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY148_09430 PF02607 B12 binding domain FY148_09430 PF02310 B12 binding domain FY148_09430 PF02574 Homocysteine S-methyltransferase FY148_09450 PF13505 Outer membrane protein beta-barrel domain FY148_09470 PF04402 Protein of unknown function (DUF541) FY148_09480 PF01894 Uncharacterised protein family UPF0047 FY148_09485 PF01590 GAF domain FY148_09485 PF00360 Phytochrome region FY148_09485 PF08446 PAS fold FY148_09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_09485 PF00512 His Kinase A (phospho-acceptor) domain FY148_09495 PF04545 Sigma-70, region 4 FY148_09495 PF04539 Sigma-70 region 3 FY148_09495 PF04542 Sigma-70 region 2 FY148_09495 PF00140 Sigma-70 factor, region 1.2 FY148_09495 PF03979 Sigma-70 factor, region 1.1 FY148_09495 PF04546 Sigma-70, non-essential region FY148_09500 PF10410 DnaB-helicase binding domain of primase FY148_09500 PF08275 DNA primase catalytic core, N-terminal domain FY148_09500 PF08278 DNA primase DnaG DnaB-binding FY148_09500 PF01807 CHC2 zinc finger FY148_09520 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY148_09520 PF00117 Glutamine amidotransferase class-I FY148_09525 PF01554 MatE FY148_09530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_09530 PF00672 HAMP domain FY148_09530 PF02743 Cache domain FY148_09540 PF04228 Putative neutral zinc metallopeptidase FY148_09555 PF02142 MGS-like domain FY148_09555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY148_09555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_09565 PF07694 5TMR of 5TMR-LYT FY148_09565 PF00990 Diguanylate cyclase, GGDEF domain FY148_09580 PF03449 Transcription elongation factor, N-terminal FY148_09580 PF01272 Transcription elongation factor, GreA/GreB, C-term FY148_09585 PF00534 Glycosyl transferases group 1 FY148_09590 PF01037 Lrp/AsnC ligand binding domain FY148_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_09600 PF03466 LysR substrate binding domain FY148_09610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY148_09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_09625 PF03466 LysR substrate binding domain FY148_09635 PF01699 Sodium/calcium exchanger protein FY148_09640 PF00155 Aminotransferase class I and II FY148_09645 PF05231 MASE1 FY148_09645 PF00563 EAL domain FY148_09660 PF00313 'Cold-shock' DNA-binding domain FY148_09665 PF00753 Metallo-beta-lactamase superfamily FY148_09675 PF12802 MarR family FY148_09680 PF00072 Response regulator receiver domain FY148_09680 PF00486 Transcriptional regulatory protein, C terminal FY148_09685 PF00672 HAMP domain FY148_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_09685 PF00512 His Kinase A (phospho-acceptor) domain FY148_09690 PF01588 Putative tRNA binding domain FY148_09695 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY148_09695 PF03807 NADP oxidoreductase coenzyme F420-dependent FY148_09710 PF01790 Prolipoprotein diacylglyceryl transferase FY148_09720 PF02578 Multi-copper polyphenol oxidoreductase laccase FY148_09735 PF14572 Phosphoribosyl synthetase-associated domain FY148_09735 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY148_09745 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY148_09755 PF00535 Glycosyl transferase family 2 FY148_09760 PF02203 Tar ligand binding domain homologue FY148_09760 PF00672 HAMP domain FY148_09760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_09765 PF00171 Aldehyde dehydrogenase family FY148_09770 PF02954 Bacterial regulatory protein, Fis family FY148_09775 PF00563 EAL domain FY148_09775 PF00990 Diguanylate cyclase, GGDEF domain FY148_09775 PF03707 Bacterial signalling protein N terminal repeat FY148_09775 PF13188 PAS domain FY148_09780 PF01386 Ribosomal L25p family FY148_09780 PF14693 Ribosomal protein TL5, C-terminal domain FY148_09785 PF08447 PAS fold FY148_09785 PF00563 EAL domain FY148_09785 PF00990 Diguanylate cyclase, GGDEF domain FY148_09785 PF08448 PAS fold FY148_09795 PF01195 Peptidyl-tRNA hydrolase FY148_09805 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY148_09810 PF01926 50S ribosome-binding GTPase FY148_09810 PF06071 Protein of unknown function (DUF933) FY148_09830 PF00156 Phosphoribosyl transferase domain FY148_09840 PF02167 Cytochrome C1 family FY148_09840 PF00033 Cytochrome b/b6/petB FY148_09840 PF00032 Cytochrome b(C-terminal)/b6/petD FY148_09845 PF00032 Cytochrome b(C-terminal)/b6/petD FY148_09845 PF00033 Cytochrome b/b6/petB FY148_09850 PF00355 Rieske [2Fe-2S] domain FY148_09850 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY148_09860 PF00664 ABC transporter transmembrane region FY148_09860 PF00005 ABC transporter FY148_09865 PF00005 ABC transporter FY148_09865 PF00664 ABC transporter transmembrane region FY148_09875 PF00588 SpoU rRNA Methylase family FY148_09880 PF02690 Na+/Pi-cotransporter FY148_09890 PF01218 Coproporphyrinogen III oxidase FY148_09905 PF13735 tRNA nucleotidyltransferase domain 2 putative FY148_09905 PF01743 Poly A polymerase head domain FY148_09905 PF12627 Probable RNA and SrmB- binding site of polymerase A FY148_09910 PF00293 NUDIX domain FY148_09920 PF17863 AAA lid domain FY148_09920 PF07726 ATPase family associated with various cellular activities (AAA) FY148_09940 PF00583 Acetyltransferase (GNAT) family FY148_09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_09945 PF03466 LysR substrate binding domain FY148_09955 PF07690 Major Facilitator Superfamily FY148_09965 PF13409 Glutathione S-transferase, N-terminal domain FY148_09970 PF00293 NUDIX domain FY148_09980 PF00682 HMGL-like FY148_09980 PF08502 LeuA allosteric (dimerisation) domain FY148_09985 PF03594 Benzoate membrane transport protein FY148_10000 PF04545 Sigma-70, region 4 FY148_10000 PF04542 Sigma-70 region 2 FY148_10010 PF00574 Clp protease FY148_10015 PF04955 HupE / UreJ protein FY148_10025 PF14489 QueF-like protein FY148_10030 PF01545 Cation efflux family FY148_10030 PF16916 Dimerisation domain of Zinc Transporter FY148_10040 PF13458 Periplasmic binding protein FY148_10050 PF01022 Bacterial regulatory protein, arsR family FY148_10055 PF00005 ABC transporter FY148_10055 PF00571 CBS domain FY148_10060 PF00528 Binding-protein-dependent transport system inner membrane component FY148_10065 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY148_10075 PF00265 Thymidine kinase FY148_10080 PF00127 Copper binding proteins, plastocyanin/azurin family FY148_10090 PF03472 Autoinducer binding domain FY148_10090 PF00196 Bacterial regulatory proteins, luxR family FY148_10095 PF03350 Uncharacterized protein family, UPF0114 FY148_10100 PF07715 TonB-dependent Receptor Plug Domain FY148_10100 PF04886 PT repeat FY148_10100 PF00593 TonB dependent receptor FY148_10110 PF00117 Glutamine amidotransferase class-I FY148_10110 PF00425 chorismate binding enzyme FY148_10110 PF04715 Anthranilate synthase component I, N terminal region FY148_10120 PF01966 HD domain FY148_10120 PF11871 Domain of unknown function (DUF3391) FY148_10125 PF13382 Adenine deaminase C-terminal domain FY148_10125 PF01979 Amidohydrolase family FY148_10130 PF00583 Acetyltransferase (GNAT) family FY148_10135 PF00128 Alpha amylase, catalytic domain FY148_10140 PF00294 pfkB family carbohydrate kinase FY148_10160 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY148_10160 PF01926 50S ribosome-binding GTPase FY148_10180 PF05992 SbmA/BacA-like family FY148_10190 PF00557 Metallopeptidase family M24 FY148_10205 PF00111 2Fe-2S iron-sulfur cluster binding domain FY148_10205 PF01799 [2Fe-2S] binding domain FY148_10210 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY148_10210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY148_10220 PF03466 LysR substrate binding domain FY148_10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_10235 PF01979 Amidohydrolase family FY148_10245 PF01070 FMN-dependent dehydrogenase FY148_10250 PF00893 Small Multidrug Resistance protein FY148_10255 PF17932 Tetracyclin repressor-like, C-terminal domain FY148_10255 PF00440 Bacterial regulatory proteins, tetR family FY148_10260 PF07943 Penicillin-binding protein 5, C-terminal domain FY148_10260 PF00768 D-alanyl-D-alanine carboxypeptidase FY148_10270 PF00576 HIUase/Transthyretin family FY148_10275 PF04115 Ureidoglycolate lyase FY148_10290 PF01014 Uricase FY148_10290 PF09349 OHCU decarboxylase FY148_10300 PF06299 Protein of unknown function (DUF1045) FY148_10305 PF01266 FAD dependent oxidoreductase FY148_10310 PF01266 FAD dependent oxidoreductase FY148_10310 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY148_10315 PF00072 Response regulator receiver domain FY148_10315 PF00672 HAMP domain FY148_10315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_10315 PF00512 His Kinase A (phospho-acceptor) domain FY148_10315 PF01627 Hpt domain FY148_10315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY148_10320 PF00270 DEAD/DEAH box helicase FY148_10320 PF00271 Helicase conserved C-terminal domain FY148_10330 PF07681 DoxX FY148_10335 PF01476 LysM domain FY148_10335 PF03734 L,D-transpeptidase catalytic domain FY148_10345 PF14403 Circularly permuted ATP-grasp type 2 FY148_10355 PF01841 Transglutaminase-like superfamily FY148_10355 PF08379 Bacterial transglutaminase-like N-terminal region FY148_10380 PF02653 Branched-chain amino acid transport system / permease component FY148_10385 PF00005 ABC transporter FY148_10390 PF13407 Periplasmic binding protein domain FY148_10395 PF03466 LysR substrate binding domain FY148_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_10420 PF01695 IstB-like ATP binding protein FY148_10425 PF00665 Integrase core domain FY148_10455 PF03743 Bacterial conjugation TrbI-like protein FY148_10465 PF04335 VirB8 protein FY148_10470 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY148_10485 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY148_10495 PF04956 TrbC/VIRB2 family FY148_10500 PF00437 Type II/IV secretion system protein FY148_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_10505 PF03466 LysR substrate binding domain FY148_10510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_10515 PF00528 Binding-protein-dependent transport system inner membrane component FY148_10515 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_10520 PF00528 Binding-protein-dependent transport system inner membrane component FY148_10525 PF00005 ABC transporter FY148_10525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_10530 PF00300 Histidine phosphatase superfamily (branch 1) FY148_10530 PF00106 short chain dehydrogenase FY148_10535 PF01266 FAD dependent oxidoreductase FY148_10540 PF05378 Hydantoinase/oxoprolinase N-terminal region FY148_10540 PF01968 Hydantoinase/oxoprolinase FY148_10550 PF01042 Endoribonuclease L-PSP FY148_10555 PF00356 Bacterial regulatory proteins, lacI family FY148_10565 PF02534 Type IV secretory system Conjugative DNA transfer FY148_10590 PF01551 Peptidase family M23 FY148_10590 PF10145 Phage-related minor tail protein FY148_10590 PF01464 Transglycosylase SLT domain FY148_10600 PF10502 Signal peptidase, peptidase S26 FY148_10635 PF01381 Helix-turn-helix FY148_10650 PF05284 Protein of unknown function (DUF736) FY148_10690 PF13005 zinc-finger binding domain of transposase IS66 FY148_10690 PF13007 Transposase C of IS166 homeodomain FY148_10690 PF03050 Transposase IS66 family FY148_10690 PF13817 IS66 C-terminal element FY148_10695 PF05717 IS66 Orf2 like protein FY148_10700 PF01527 Transposase FY148_10735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_10735 PF00672 HAMP domain FY148_10740 PF07690 Major Facilitator Superfamily FY148_10750 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY148_10750 PF02607 B12 binding domain FY148_10750 PF02310 B12 binding domain FY148_10750 PF02574 Homocysteine S-methyltransferase FY148_10750 PF00809 Pterin binding enzyme FY148_10755 PF00528 Binding-protein-dependent transport system inner membrane component FY148_10760 PF00528 Binding-protein-dependent transport system inner membrane component FY148_10765 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_10770 PF00005 ABC transporter FY148_10790 PF00331 Glycosyl hydrolase family 10 FY148_10795 PF00535 Glycosyl transferase family 2 FY148_10810 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY148_10825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY148_10825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY148_10825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY148_10825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY148_10840 PF01152 Bacterial-like globin FY148_10860 PF08362 YcdC-like protein, C-terminal region FY148_10860 PF00440 Bacterial regulatory proteins, tetR family FY148_10865 PF07687 Peptidase dimerisation domain FY148_10865 PF01546 Peptidase family M20/M25/M40 FY148_10870 PF01979 Amidohydrolase family FY148_10875 PF00293 NUDIX domain FY148_10880 PF00005 ABC transporter FY148_10885 PF00528 Binding-protein-dependent transport system inner membrane component FY148_10890 PF00528 Binding-protein-dependent transport system inner membrane component FY148_10905 PF00873 AcrB/AcrD/AcrF family FY148_10920 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY148_10925 PF01730 UreF FY148_10930 PF02814 UreE urease accessory protein, N-terminal domain FY148_10930 PF05194 UreE urease accessory protein, C-terminal domain FY148_10935 PF08534 Redoxin FY148_10945 PF00449 Urease alpha-subunit, N-terminal domain FY148_10945 PF01979 Amidohydrolase family FY148_10955 PF07007 Lysozyme inhibitor LprI FY148_10965 PF00699 Urease beta subunit FY148_10970 PF06906 Protein of unknown function (DUF1272) FY148_10975 PF00547 Urease, gamma subunit FY148_10980 PF01774 UreD urease accessory protein FY148_10990 PF00005 ABC transporter FY148_10995 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_10995 PF00005 ABC transporter FY148_11005 PF02653 Branched-chain amino acid transport system / permease component FY148_11015 PF10931 Protein of unknown function (DUF2735) FY148_11020 PF00120 Glutamine synthetase, catalytic domain FY148_11020 PF03951 Glutamine synthetase, beta-Grasp domain FY148_11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_11030 PF00072 Response regulator receiver domain FY148_11030 PF00989 PAS fold FY148_11030 PF00512 His Kinase A (phospho-acceptor) domain FY148_11030 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY148_11030 PF01627 Hpt domain FY148_11035 PF00072 Response regulator receiver domain FY148_11045 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY148_11045 PF01522 Polysaccharide deacetylase FY148_11050 PF13458 Periplasmic binding protein FY148_11060 PF00005 ABC transporter FY148_11065 PF00005 ABC transporter FY148_11065 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_11070 PF02653 Branched-chain amino acid transport system / permease component FY148_11070 PF11862 Domain of unknown function (DUF3382) FY148_11075 PF02653 Branched-chain amino acid transport system / permease component FY148_11080 PF00459 Inositol monophosphatase family FY148_11110 PF00072 Response regulator receiver domain FY148_11110 PF00486 Transcriptional regulatory protein, C terminal FY148_11130 PF10090 Histidine phosphotransferase C-terminal domain FY148_11145 PF00588 SpoU rRNA Methylase family FY148_11155 PF00849 RNA pseudouridylate synthase FY148_11165 PF00140 Sigma-70 factor, region 1.2 FY148_11165 PF04542 Sigma-70 region 2 FY148_11165 PF04545 Sigma-70, region 4 FY148_11175 PF00709 Adenylosuccinate synthetase FY148_11200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_11210 PF03167 Uracil DNA glycosylase superfamily FY148_11215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_11220 PF04304 Protein of unknown function (DUF454) FY148_11225 PF00005 ABC transporter FY148_11230 PF01032 FecCD transport family FY148_11235 PF01497 Periplasmic binding protein FY148_11245 PF06228 Haem utilisation ChuX/HutX FY148_11260 PF13443 Cro/C1-type HTH DNA-binding domain FY148_11270 PF00551 Formyl transferase FY148_11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_11285 PF00672 HAMP domain FY148_11285 PF00512 His Kinase A (phospho-acceptor) domain FY148_11290 PF00486 Transcriptional regulatory protein, C terminal FY148_11290 PF00072 Response regulator receiver domain FY148_11305 PF03401 Tripartite tricarboxylate transporter family receptor FY148_11315 PF01970 Tripartite tricarboxylate transporter TctA family FY148_11330 PF01032 FecCD transport family FY148_11335 PF01032 FecCD transport family FY148_11340 PF00005 ABC transporter FY148_11345 PF00210 Ferritin-like domain FY148_11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_11360 PF00672 HAMP domain FY148_11365 PF00248 Aldo/keto reductase family FY148_11370 PF07690 Major Facilitator Superfamily FY148_11375 PF03466 LysR substrate binding domain FY148_11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_11380 PF03466 LysR substrate binding domain FY148_11385 PF07859 alpha/beta hydrolase fold FY148_11390 PF13533 Biotin-lipoyl like FY148_11395 PF00873 AcrB/AcrD/AcrF family FY148_11410 PF13091 PLD-like domain FY148_11410 PF13396 Phospholipase_D-nuclease N-terminal FY148_11415 PF08543 Phosphomethylpyrimidine kinase FY148_11420 PF00484 Carbonic anhydrase FY148_11430 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY148_11430 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY148_11440 PF00083 Sugar (and other) transporter FY148_11445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY148_11445 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY148_11445 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY148_11450 PF02233 NAD(P) transhydrogenase beta subunit FY148_11455 PF01613 Flavin reductase like domain FY148_11460 PF00881 Nitroreductase family FY148_11465 PF00561 alpha/beta hydrolase fold FY148_11470 PF01042 Endoribonuclease L-PSP FY148_11475 PF00857 Isochorismatase family FY148_11480 PF00296 Luciferase-like monooxygenase FY148_11485 PF01126 Heme oxygenase FY148_11490 PF00701 Dihydrodipicolinate synthetase family FY148_11495 PF07729 FCD domain FY148_11495 PF00392 Bacterial regulatory proteins, gntR family FY148_11505 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11510 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11515 PF17912 MalK OB fold domain FY148_11515 PF03459 TOBE domain FY148_11515 PF00005 ABC transporter FY148_11520 PF00294 pfkB family carbohydrate kinase FY148_11525 PF03576 Peptidase family S58 FY148_11530 PF01063 Amino-transferase class IV FY148_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_11535 PF03466 LysR substrate binding domain FY148_11540 PF00144 Beta-lactamase FY148_11545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_11545 PF00005 ABC transporter FY148_11550 PF00005 ABC transporter FY148_11550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_11555 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_11555 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11560 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_11570 PF01244 Membrane dipeptidase (Peptidase family M19) FY148_11580 PF09924 Uncharacterised conserved protein (DUF2156) FY148_11580 PF03706 Lysylphosphatidylglycerol synthase TM region FY148_11595 PF07690 Major Facilitator Superfamily FY148_11605 PF00775 Dioxygenase FY148_11605 PF04444 Catechol dioxygenase N terminus FY148_11610 PF00465 Iron-containing alcohol dehydrogenase FY148_11615 PF04909 Amidohydrolase FY148_11620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_11620 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY148_11625 PF01613 Flavin reductase like domain FY148_11645 PF00512 His Kinase A (phospho-acceptor) domain FY148_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_11650 PF00486 Transcriptional regulatory protein, C terminal FY148_11650 PF00072 Response regulator receiver domain FY148_11660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY148_11665 PF00005 ABC transporter FY148_11665 PF08402 TOBE domain FY148_11670 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11685 PF00072 Response regulator receiver domain FY148_11685 PF00486 Transcriptional regulatory protein, C terminal FY148_11690 PF08448 PAS fold FY148_11690 PF00512 His Kinase A (phospho-acceptor) domain FY148_11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_11690 PF00072 Response regulator receiver domain FY148_11690 PF13188 PAS domain FY148_11695 PF00202 Aminotransferase class-III FY148_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_11700 PF03466 LysR substrate binding domain FY148_11705 PF00313 'Cold-shock' DNA-binding domain FY148_11740 PF01259 SAICAR synthetase FY148_11745 PF00440 Bacterial regulatory proteins, tetR family FY148_11750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_11750 PF00529 HlyD membrane-fusion protein of T1SS FY148_11755 PF00873 AcrB/AcrD/AcrF family FY148_11760 PF02321 Outer membrane efflux protein FY148_11765 PF08207 Elongation factor P (EF-P) KOW-like domain FY148_11765 PF01132 Elongation factor P (EF-P) OB domain FY148_11765 PF09285 Elongation factor P, C-terminal FY148_11770 PF00152 tRNA synthetases class II (D, K and N) FY148_11775 PF12544 Lysine-2,3-aminomutase FY148_11775 PF04055 Radical SAM superfamily FY148_11790 PF03466 LysR substrate binding domain FY148_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_11795 PF01266 FAD dependent oxidoreductase FY148_11805 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11810 PF03459 TOBE domain FY148_11810 PF00005 ABC transporter FY148_11820 PF03576 Peptidase family S58 FY148_11825 PF05690 Thiazole biosynthesis protein ThiG FY148_11835 PF01266 FAD dependent oxidoreductase FY148_11840 PF01964 Radical SAM ThiC family FY148_11840 PF13667 ThiC-associated domain FY148_11850 PF00550 Phosphopantetheine attachment site FY148_11880 PF00664 ABC transporter transmembrane region FY148_11880 PF00005 ABC transporter FY148_11885 PF00027 Cyclic nucleotide-binding domain FY148_11885 PF13545 Crp-like helix-turn-helix domain FY148_11895 PF00211 Adenylate and Guanylate cyclase catalytic domain FY148_11895 PF00672 HAMP domain FY148_11905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY148_11905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY148_11905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY148_11910 PF13439 Glycosyltransferase Family 4 FY148_11910 PF00534 Glycosyl transferases group 1 FY148_11925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_11925 PF00005 ABC transporter FY148_11930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_11935 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11940 PF00528 Binding-protein-dependent transport system inner membrane component FY148_11940 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_11955 PF03033 Glycosyltransferase family 28 N-terminal domain FY148_11955 PF04101 Glycosyltransferase family 28 C-terminal domain FY148_11960 PF03932 CutC family FY148_11965 PF07690 Major Facilitator Superfamily FY148_11975 PF00728 Glycosyl hydrolase family 20, catalytic domain FY148_11975 PF02838 Glycosyl hydrolase family 20, domain 2 FY148_11985 PF01418 Helix-turn-helix domain, rpiR family FY148_11985 PF01380 SIS domain FY148_11995 PF00005 ABC transporter FY148_11995 PF17912 MalK OB fold domain FY148_12000 PF01547 Bacterial extracellular solute-binding protein FY148_12005 PF00528 Binding-protein-dependent transport system inner membrane component FY148_12010 PF00528 Binding-protein-dependent transport system inner membrane component FY148_12020 PF00392 Bacterial regulatory proteins, gntR family FY148_12020 PF07702 UTRA domain FY148_12025 PF01380 SIS domain FY148_12030 PF01979 Amidohydrolase family FY148_12035 PF00480 ROK family FY148_12040 PF01494 FAD binding domain FY148_12045 PF01569 PAP2 superfamily FY148_12050 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY148_12050 PF13288 DXP reductoisomerase C-terminal domain FY148_12050 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY148_12055 PF00155 Aminotransferase class I and II FY148_12065 PF01103 Surface antigen FY148_12065 PF07244 Surface antigen variable number repeat FY148_12065 PF17243 POTRA domain TamA domain 1 FY148_12075 PF01584 CheW-like domain FY148_12080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_12080 PF13426 PAS domain FY148_12080 PF08447 PAS fold FY148_12085 PF02634 FdhD/NarQ family FY148_12090 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY148_12095 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY148_12095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY148_12100 PF00231 ATP synthase FY148_12105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY148_12105 PF00306 ATP synthase alpha/beta chain, C terminal domain FY148_12105 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY148_12110 PF00213 ATP synthase delta (OSCP) subunit FY148_12120 PF00270 DEAD/DEAH box helicase FY148_12120 PF17764 3′ DNA-binding domain (3′BD) FY148_12120 PF18074 Primosomal protein N C-terminal domain FY148_12120 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY148_12125 PF02899 Phage integrase, N-terminal SAM-like domain FY148_12125 PF00589 Phage integrase family FY148_12145 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_12145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY148_12150 PF01810 LysE type translocator FY148_12160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY148_12160 PF00364 Biotin-requiring enzyme FY148_12160 PF02817 e3 binding domain FY148_12165 PF16870 2-oxoglutarate dehydrogenase C-terminal FY148_12165 PF00676 Dehydrogenase E1 component FY148_12165 PF16078 2-oxoglutarate dehydrogenase N-terminus FY148_12165 PF02779 Transketolase, pyrimidine binding domain FY148_12170 PF00549 CoA-ligase FY148_12170 PF02629 CoA binding domain FY148_12175 PF00549 CoA-ligase FY148_12175 PF08442 ATP-grasp domain FY148_12180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY148_12180 PF00056 lactate/malate dehydrogenase, NAD binding domain FY148_12185 PF03969 AFG1-like ATPase FY148_12190 PF02974 Protease inhibitor Inh FY148_12195 PF13085 2Fe-2S iron-sulfur cluster binding domain FY148_12195 PF13237 4Fe-4S dicluster domain FY148_12200 PF00890 FAD binding domain FY148_12200 PF02910 Fumarate reductase flavoprotein C-term FY148_12210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY148_12235 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY148_12235 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY148_12240 PF00814 Glycoprotease family FY148_12245 PF03900 Porphobilinogen deaminase, C-terminal domain FY148_12245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY148_12270 PF00117 Glutamine amidotransferase class-I FY148_12280 PF02325 YGGT family FY148_12285 PF02594 Uncharacterised ACR, YggU family COG1872 FY148_12290 PF00719 Inorganic pyrophosphatase FY148_12300 PF00009 Elongation factor Tu GTP binding domain FY148_12300 PF03144 Elongation factor Tu domain 2 FY148_12300 PF00679 Elongation factor G C-terminus FY148_12305 PF01432 Peptidase family M3 FY148_12310 PF01047 MarR family FY148_12315 PF07690 Major Facilitator Superfamily FY148_12320 PF00764 Arginosuccinate synthase FY148_12325 PF00106 short chain dehydrogenase FY148_12330 PF01810 LysE type translocator FY148_12335 PF00005 ABC transporter FY148_12340 PF02653 Branched-chain amino acid transport system / permease component FY148_12350 PF04055 Radical SAM superfamily FY148_12365 PF01329 Pterin 4 alpha carbinolamine dehydratase FY148_12370 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY148_12375 PF02834 LigT like Phosphoesterase FY148_12380 PF13472 GDSL-like Lipase/Acylhydrolase family FY148_12385 PF00005 ABC transporter FY148_12395 PF01027 Inhibitor of apoptosis-promoting Bax1 FY148_12410 PF00330 Aconitase family (aconitate hydratase) FY148_12410 PF00694 Aconitase C-terminal domain FY148_12415 PF00005 ABC transporter FY148_12420 PF03379 CcmB protein FY148_12425 PF01578 Cytochrome C assembly protein FY148_12435 PF08534 Redoxin FY148_12440 PF00990 Diguanylate cyclase, GGDEF domain FY148_12445 PF10755 Protein of unknown function (DUF2585) FY148_12450 PF04279 Intracellular septation protein A FY148_12455 PF02881 SRP54-type protein, helical bundle domain FY148_12455 PF00448 SRP54-type protein, GTPase domain FY148_12460 PF04055 Radical SAM superfamily FY148_12460 PF00919 Uncharacterized protein family UPF0004 FY148_12465 PF01678 Diaminopimelate epimerase FY148_12470 PF12706 Beta-lactamase superfamily domain FY148_12475 PF00448 SRP54-type protein, GTPase domain FY148_12475 PF02881 SRP54-type protein, helical bundle domain FY148_12475 PF02978 Signal peptide binding domain FY148_12480 PF02153 Prephenate dehydrogenase FY148_12480 PF01817 Chorismate mutase type II FY148_12485 PF00886 Ribosomal protein S16 FY148_12490 PF05239 PRC-barrel domain FY148_12490 PF01782 RimM N-terminal domain FY148_12495 PF01746 tRNA (Guanine-1)-methyltransferase FY148_12505 PF01245 Ribosomal protein L19 FY148_12510 PF00664 ABC transporter transmembrane region FY148_12510 PF00005 ABC transporter FY148_12515 PF00529 HlyD membrane-fusion protein of T1SS FY148_12515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_12525 PF07690 Major Facilitator Superfamily FY148_12530 PF00330 Aconitase family (aconitate hydratase) FY148_12545 PF01435 Peptidase family M48 FY148_12550 PF00005 ABC transporter FY148_12555 PF00528 Binding-protein-dependent transport system inner membrane component FY148_12560 PF01547 Bacterial extracellular solute-binding protein FY148_12570 PF16326 ABC transporter C-terminal domain FY148_12570 PF00005 ABC transporter FY148_12580 PF04204 Homoserine O-succinyltransferase FY148_12585 PF01263 Aldose 1-epimerase FY148_12590 PF00912 Transglycosylase FY148_12595 PF00348 Polyprenyl synthetase FY148_12600 PF13488 Glycine zipper FY148_12600 PF00691 OmpA family FY148_12605 PF04551 GcpE protein FY148_12610 PF07690 Major Facilitator Superfamily FY148_12615 PF00455 DeoR C terminal sensor domain FY148_12615 PF08220 DeoR-like helix-turn-helix domain FY148_12620 PF00289 Biotin carboxylase, N-terminal domain FY148_12620 PF00364 Biotin-requiring enzyme FY148_12620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_12620 PF00682 HMGL-like FY148_12620 PF02436 Conserved carboxylase domain FY148_12620 PF02785 Biotin carboxylase C-terminal domain FY148_12625 PF00072 Response regulator receiver domain FY148_12625 PF00196 Bacterial regulatory proteins, luxR family FY148_12630 PF00005 ABC transporter FY148_12630 PF00664 ABC transporter transmembrane region FY148_12640 PF10091 Putative glucoamylase FY148_12640 PF06165 Glycosyltransferase family 36 FY148_12640 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY148_12645 PF07687 Peptidase dimerisation domain FY148_12645 PF01546 Peptidase family M20/M25/M40 FY148_12650 PF01266 FAD dependent oxidoreductase FY148_12655 PF00291 Pyridoxal-phosphate dependent enzyme FY148_12660 PF00920 Dehydratase family FY148_12665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY148_12665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY148_12670 PF01370 NAD dependent epimerase/dehydratase family FY148_12675 PF02913 FAD linked oxidases, C-terminal domain FY148_12675 PF01565 FAD binding domain FY148_12680 PF07729 FCD domain FY148_12680 PF00392 Bacterial regulatory proteins, gntR family FY148_12690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY148_12695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY148_12700 PF03480 Bacterial extracellular solute-binding protein, family 7 FY148_12705 PF13193 AMP-binding enzyme C-terminal domain FY148_12705 PF00501 AMP-binding enzyme FY148_12705 PF16177 Acetyl-coenzyme A synthetase N-terminus FY148_12715 PF01168 Alanine racemase, N-terminal domain FY148_12720 PF13603 Leucyl-tRNA synthetase, Domain 2 FY148_12720 PF00133 tRNA synthetases class I (I, L, M and V) FY148_12720 PF08264 Anticodon-binding domain of tRNA FY148_12735 PF11953 Domain of unknown function (DUF3470) FY148_12735 PF00037 4Fe-4S binding domain FY148_12740 PF00579 tRNA synthetases class I (W and Y) FY148_12740 PF01479 S4 domain FY148_12755 PF01494 FAD binding domain FY148_12765 PF00543 Nitrogen regulatory protein P-II FY148_12770 PF00909 Ammonium Transporter Family FY148_12775 PF09397 Ftsk gamma domain FY148_12775 PF01580 FtsK/SpoIIIE family FY148_12775 PF17854 FtsK alpha domain FY148_12775 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY148_12780 PF03548 Outer membrane lipoprotein carrier protein LolA FY148_12795 PF00072 Response regulator receiver domain FY148_12795 PF00486 Transcriptional regulatory protein, C terminal FY148_12805 PF02559 CarD-like/TRCF domain FY148_12810 PF05088 Bacterial NAD-glutamate dehydrogenase FY148_12815 PF11700 Vacuole effluxer Atg22 like FY148_12820 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY148_12820 PF05233 PHB accumulation regulatory domain FY148_12825 PF00108 Thiolase, N-terminal domain FY148_12825 PF02803 Thiolase, C-terminal domain FY148_12840 PF00210 Ferritin-like domain FY148_12845 PF00293 NUDIX domain FY148_12850 PF04748 Divergent polysaccharide deacetylase FY148_12855 PF13180 PDZ domain FY148_12855 PF03572 Peptidase family S41 FY148_12865 PF02590 Predicted SPOUT methyltransferase FY148_12875 PF01467 Cytidylyltransferase-like FY148_12880 PF00171 Aldehyde dehydrogenase family FY148_12885 PF00696 Amino acid kinase family FY148_12885 PF01472 PUA domain FY148_12890 PF01926 50S ribosome-binding GTPase FY148_12890 PF01018 GTP1/OBG FY148_12895 PF13302 Acetyltransferase (GNAT) domain FY148_12905 PF01016 Ribosomal L27 protein FY148_12910 PF00829 Ribosomal prokaryotic L21 protein FY148_12925 PF03328 HpcH/HpaI aldolase/citrate lyase family FY148_12935 PF00694 Aconitase C-terminal domain FY148_12940 PF00180 Isocitrate/isopropylmalate dehydrogenase FY148_12945 PF03150 Di-haem cytochrome c peroxidase FY148_12950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY148_12950 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY148_12955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_12960 PF01888 CbiD FY148_12965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_12975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_12980 PF02571 Precorrin-6x reductase CbiJ/CobK FY148_12985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_12990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_12995 PF02570 Precorrin-8X methylmutase FY148_13000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY148_13005 PF02514 CobN/Magnesium Chelatase FY148_13010 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY148_13010 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY148_13020 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY148_13025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY148_13025 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY148_13030 PF03186 CobD/Cbib protein FY148_13035 PF00155 Aminotransferase class I and II FY148_13040 PF13378 Enolase C-terminal domain-like FY148_13040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_13045 PF05336 L-rhamnose mutarotase FY148_13050 PF01232 Mannitol dehydrogenase Rossmann domain FY148_13050 PF08125 Mannitol dehydrogenase C-terminal domain FY148_13055 PF08240 Alcohol dehydrogenase GroES-like domain FY148_13055 PF00107 Zinc-binding dehydrogenase FY148_13065 PF00248 Aldo/keto reductase family FY148_13075 PF02653 Branched-chain amino acid transport system / permease component FY148_13080 PF00005 ABC transporter FY148_13085 PF07729 FCD domain FY148_13085 PF00392 Bacterial regulatory proteins, gntR family FY148_13090 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY148_13090 PF08666 SAF domain FY148_13095 PF01808 AICARFT/IMPCHase bienzyme FY148_13095 PF02142 MGS-like domain FY148_13105 PF01189 16S rRNA methyltransferase RsmB/F FY148_13105 PF01029 NusB family FY148_13110 PF01435 Peptidase family M48 FY148_13120 PF17762 HTH domain found in ParB protein FY148_13120 PF02195 ParB-like nuclease domain FY148_13125 PF13614 AAA domain FY148_13130 PF02527 rRNA small subunit methyltransferase G FY148_13135 PF13932 GidA associated domain FY148_13135 PF01134 Glucose inhibited division protein A FY148_13140 PF01926 50S ribosome-binding GTPase FY148_13140 PF10396 GTP-binding protein TrmE N-terminus FY148_13140 PF12631 MnmE helical domain FY148_13145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY148_13145 PF07498 Rho termination factor, N-terminal domain FY148_13145 PF07497 Rho termination factor, RNA-binding domain FY148_13150 PF03653 Uncharacterised protein family (UPF0093) FY148_13155 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY148_13160 PF03618 Kinase/pyrophosphorylase FY148_13165 PF02545 Maf-like protein FY148_13170 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY148_13170 PF01488 Shikimate / quinate 5-dehydrogenase FY148_13170 PF08501 Shikimate dehydrogenase substrate binding domain FY148_13175 PF01121 Dephospho-CoA kinase FY148_13180 PF00929 Exonuclease FY148_13185 PF02556 Preprotein translocase subunit SecB FY148_13190 PF04186 FxsA cytoplasmic membrane protein FY148_13200 PF06725 3D domain FY148_13200 PF03562 MltA specific insert domain FY148_13215 PF00204 DNA gyrase B FY148_13215 PF00986 DNA gyrase B subunit, carboxyl terminus FY148_13215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_13215 PF01751 Toprim domain FY148_13225 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY148_13240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY148_13245 PF00291 Pyridoxal-phosphate dependent enzyme FY148_13250 PF00290 Tryptophan synthase alpha chain FY148_13255 PF01039 Carboxyl transferase domain FY148_13260 PF02875 Mur ligase family, glutamate ligase domain FY148_13260 PF08245 Mur ligase middle domain FY148_13265 PF00085 Thioredoxin FY148_13270 PF12705 PD-(D/E)XK nuclease superfamily FY148_13270 PF00580 UvrD/REP helicase N-terminal domain FY148_13270 PF13361 UvrD-like helicase C-terminal domain FY148_13280 PF12804 MobA-like NTP transferase domain FY148_13285 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY148_13290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_13290 PF00512 His Kinase A (phospho-acceptor) domain FY148_13295 PF05221 S-adenosyl-L-homocysteine hydrolase FY148_13295 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY148_13300 PF00381 PTS HPr component phosphorylation site FY148_13305 PF03610 PTS system fructose IIA component FY148_13305 PF03830 PTS system sorbose subfamily IIB component FY148_13310 PF07475 HPr Serine kinase C-terminal domain FY148_13310 PF02603 HPr Serine kinase N terminus FY148_13315 PF13755 Sensor N-terminal transmembrane domain FY148_13315 PF00672 HAMP domain FY148_13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_13315 PF00512 His Kinase A (phospho-acceptor) domain FY148_13315 PF13756 Stimulus-sensing domain FY148_13320 PF00486 Transcriptional regulatory protein, C terminal FY148_13320 PF00072 Response regulator receiver domain FY148_13325 PF01293 Phosphoenolpyruvate carboxykinase FY148_13330 PF00472 RF-1 domain FY148_13335 PF04972 BON domain FY148_13335 PF01476 LysM domain FY148_13340 PF00485 Phosphoribulokinase / Uridine kinase family FY148_13345 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY148_13350 PF00977 Histidine biosynthesis protein FY148_13355 PF00977 Histidine biosynthesis protein FY148_13360 PF00117 Glutamine amidotransferase class-I FY148_13370 PF00475 Imidazoleglycerol-phosphate dehydratase FY148_13375 PF00227 Proteasome subunit FY148_13380 PF00004 ATPase family associated with various cellular activities (AAA) FY148_13380 PF07724 AAA domain (Cdc48 subfamily) FY148_13380 PF10431 C-terminal, D2-small domain, of ClpB protein FY148_13390 PF01274 Malate synthase FY148_13405 PF00072 Response regulator receiver domain FY148_13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_13410 PF00512 His Kinase A (phospho-acceptor) domain FY148_13415 PF00271 Helicase conserved C-terminal domain FY148_13415 PF08482 ATP-dependent helicase C-terminal FY148_13415 PF00270 DEAD/DEAH box helicase FY148_13415 PF04408 Helicase associated domain (HA2) FY148_13455 PF00570 HRDC domain FY148_13455 PF09382 RQC domain FY148_13455 PF16124 RecQ zinc-binding FY148_13455 PF00271 Helicase conserved C-terminal domain FY148_13455 PF00270 DEAD/DEAH box helicase FY148_13460 PF00480 ROK family FY148_13465 PF13407 Periplasmic binding protein domain FY148_13470 PF02653 Branched-chain amino acid transport system / permease component FY148_13475 PF00005 ABC transporter FY148_13480 PF00485 Phosphoribulokinase / Uridine kinase family FY148_13485 PF00462 Glutaredoxin FY148_13490 PF07972 NrdI Flavodoxin like FY148_13495 PF02867 Ribonucleotide reductase, barrel domain FY148_13495 PF00317 Ribonucleotide reductase, all-alpha domain FY148_13495 PF08343 Ribonucleotide reductase N-terminal FY148_13500 PF00268 Ribonucleotide reductase, small chain FY148_13510 PF02463 RecF/RecN/SMC N terminal domain FY148_13515 PF00581 Rhodanese-like domain FY148_13515 PF00899 ThiF family FY148_13530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY148_13530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_13540 PF00294 pfkB family carbohydrate kinase FY148_13550 PF05175 Methyltransferase small domain FY148_13550 PF08468 Methyltransferase small domain N-terminal FY148_13555 PF00575 S1 RNA binding domain FY148_13555 PF00013 KH domain FY148_13555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY148_13555 PF01138 3' exoribonuclease family, domain 1 FY148_13555 PF03725 3' exoribonuclease family, domain 2 FY148_13560 PF00312 Ribosomal protein S15 FY148_13565 PF09157 Pseudouridine synthase II TruB, C-terminal FY148_13565 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY148_13565 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY148_13570 PF02033 Ribosome-binding factor A FY148_13575 PF03144 Elongation factor Tu domain 2 FY148_13575 PF00009 Elongation factor Tu GTP binding domain FY148_13575 PF11987 Translation-initiation factor 2 FY148_13575 PF08364 Bacterial translation initiation factor IF-2 associated region FY148_13575 PF04760 Translation initiation factor IF-2, N-terminal region FY148_13585 PF13184 NusA-like KH domain FY148_13585 PF08529 NusA N-terminal domain FY148_13585 PF00575 S1 RNA binding domain FY148_13590 PF02576 RimP N-terminal domain FY148_13590 PF17384 RimP C-terminal SH3 domain FY148_13595 PF05977 Transmembrane secretion effector FY148_13605 PF13406 Transglycosylase SLT domain FY148_13610 PF13662 Toprim domain FY148_13610 PF02132 RecR protein FY148_13620 PF02575 YbaB/EbfC DNA-binding family FY148_13625 PF12169 DNA polymerase III subunits gamma and tau domain III FY148_13625 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY148_13625 PF12170 DNA polymerase III tau subunit V interacting with alpha FY148_13640 PF00293 NUDIX domain FY148_13640 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY148_13640 PF09297 NADH pyrophosphatase zinc ribbon domain FY148_13645 PF01817 Chorismate mutase type II FY148_13645 PF00800 Prephenate dehydratase FY148_13650 PF02348 Cytidylyltransferase FY148_13655 PF00034 Cytochrome c FY148_13660 PF02397 Bacterial sugar transferase FY148_13665 PF00905 Penicillin binding protein transpeptidase domain FY148_13665 PF00912 Transglycosylase FY148_13670 PF04073 Aminoacyl-tRNA editing domain FY148_13675 PF00313 'Cold-shock' DNA-binding domain FY148_13680 PF07687 Peptidase dimerisation domain FY148_13680 PF01546 Peptidase family M20/M25/M40 FY148_13685 PF01047 MarR family FY148_13690 PF01367 5'-3' exonuclease, C-terminal SAM fold FY148_13690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY148_13690 PF00476 DNA polymerase family A FY148_13690 PF01612 3'-5' exonuclease FY148_13695 PF01783 Ribosomal L32p protein family FY148_13700 PF02743 Cache domain FY148_13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_13700 PF00512 His Kinase A (phospho-acceptor) domain FY148_13705 PF02954 Bacterial regulatory protein, Fis family FY148_13705 PF00072 Response regulator receiver domain FY148_13705 PF00158 Sigma-54 interaction domain FY148_13710 PF03401 Tripartite tricarboxylate transporter family receptor FY148_13715 PF07331 Tripartite tricarboxylate transporter TctB family FY148_13720 PF01970 Tripartite tricarboxylate transporter TctA family FY148_13725 PF04102 SlyX FY148_13735 PF01556 DnaJ C terminal domain FY148_13735 PF00684 DnaJ central domain FY148_13735 PF00226 DnaJ domain FY148_13740 PF00012 Hsp70 protein FY148_13755 PF01625 Peptide methionine sulfoxide reductase FY148_13760 PF02608 ABC transporter substrate-binding protein PnrA-like FY148_13765 PF00005 ABC transporter FY148_13770 PF02653 Branched-chain amino acid transport system / permease component FY148_13775 PF02653 Branched-chain amino acid transport system / permease component FY148_13780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY148_13785 PF01048 Phosphorylase superfamily FY148_13790 PF01791 DeoC/LacD family aldolase FY148_13795 PF02885 Glycosyl transferase family, helical bundle domain FY148_13795 PF00591 Glycosyl transferase family, a/b domain FY148_13795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY148_13810 PF00962 Adenosine/AMP deaminase FY148_13815 PF01676 Metalloenzyme superfamily FY148_13825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY148_13830 PF00510 Cytochrome c oxidase subunit III FY148_13835 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY148_13840 PF06481 COX Aromatic Rich Motif FY148_13840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY148_13845 PF07690 Major Facilitator Superfamily FY148_13845 PF00083 Sugar (and other) transporter FY148_13850 PF04898 Glutamate synthase central domain FY148_13850 PF00310 Glutamine amidotransferases class-II FY148_13850 PF01493 GXGXG motif FY148_13850 PF01645 Conserved region in glutamate synthase FY148_13855 PF00175 Oxidoreductase NAD-binding domain FY148_13855 PF00258 Flavodoxin FY148_13855 PF00667 FAD binding domain FY148_13875 PF02801 Beta-ketoacyl synthase, C-terminal domain FY148_13875 PF00109 Beta-ketoacyl synthase, N-terminal domain FY148_13880 PF07977 FabA-like domain FY148_13890 PF03458 UPF0126 domain FY148_13900 PF06912 Protein of unknown function (DUF1275) FY148_13910 PF00528 Binding-protein-dependent transport system inner membrane component FY148_13915 PF00005 ABC transporter FY148_13920 PF07702 UTRA domain FY148_13920 PF00392 Bacterial regulatory proteins, gntR family FY148_13925 PF01618 MotA/TolQ/ExbB proton channel family FY148_13930 PF02472 Biopolymer transport protein ExbD/TolR FY148_13940 PF02615 Malate/L-lactate dehydrogenase FY148_13955 PF00625 Guanylate kinase FY148_13960 PF07969 Amidohydrolase family FY148_13965 PF06299 Protein of unknown function (DUF1045) FY148_13970 PF00528 Binding-protein-dependent transport system inner membrane component FY148_13975 PF00528 Binding-protein-dependent transport system inner membrane component FY148_13985 PF00005 ABC transporter FY148_13995 PF00005 ABC transporter FY148_14000 PF00005 ABC transporter FY148_14005 PF06007 Phosphonate metabolism protein PhnJ FY148_14010 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY148_14015 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY148_14020 PF06754 Phosphonate metabolism protein PhnG FY148_14025 PF00392 Bacterial regulatory proteins, gntR family FY148_14025 PF07702 UTRA domain FY148_14030 PF05173 Dihydrodipicolinate reductase, C-terminus FY148_14030 PF01113 Dihydrodipicolinate reductase, N-terminus FY148_14035 PF02685 Glucokinase FY148_14040 PF02142 MGS-like domain FY148_14045 PF03411 Penicillin-insensitive murein endopeptidase FY148_14050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_14055 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14060 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_14060 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_14065 PF00005 ABC transporter FY148_14070 PF01266 FAD dependent oxidoreductase FY148_14075 PF00120 Glutamine synthetase, catalytic domain FY148_14080 PF01266 FAD dependent oxidoreductase FY148_14090 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14095 PF00005 ABC transporter FY148_14100 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY148_14115 PF02082 Transcriptional regulator FY148_14120 PF13416 Bacterial extracellular solute-binding protein FY148_14130 PF05987 Bacterial protein of unknown function (DUF898) FY148_14135 PF00171 Aldehyde dehydrogenase family FY148_14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_14140 PF03466 LysR substrate binding domain FY148_14145 PF00892 EamA-like transporter family FY148_14160 PF00877 NlpC/P60 family FY148_14170 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY148_14170 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY148_14175 PF00883 Cytosol aminopeptidase family, catalytic domain FY148_14175 PF02789 Cytosol aminopeptidase family, N-terminal domain FY148_14195 PF00437 Type II/IV secretion system protein FY148_14210 PF04972 BON domain FY148_14210 PF00263 Bacterial type II and III secretion system protein FY148_14210 PF13629 Pilus formation protein N terminal region FY148_14250 PF00117 Glutamine amidotransferase class-I FY148_14255 PF07411 Domain of unknown function (DUF1508) FY148_14260 PF01183 Glycosyl hydrolases family 25 FY148_14265 PF00892 EamA-like transporter family FY148_14270 PF00392 Bacterial regulatory proteins, gntR family FY148_14270 PF00155 Aminotransferase class I and II FY148_14285 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_14300 PF00679 Elongation factor G C-terminus FY148_14300 PF00009 Elongation factor Tu GTP binding domain FY148_14300 PF03144 Elongation factor Tu domain 2 FY148_14300 PF06421 GTP-binding protein LepA C-terminus FY148_14305 PF00795 Carbon-nitrogen hydrolase FY148_14335 PF02311 AraC-like ligand binding domain FY148_14335 PF12833 Helix-turn-helix domain FY148_14340 PF03480 Bacterial extracellular solute-binding protein, family 7 FY148_14365 PF00707 Translation initiation factor IF-3, C-terminal domain FY148_14365 PF05198 Translation initiation factor IF-3, N-terminal domain FY148_14370 PF01632 Ribosomal protein L35 FY148_14375 PF00453 Ribosomal protein L20 FY148_14385 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY148_14385 PF01409 tRNA synthetases class II core domain (F) FY148_14390 PF03483 B3/4 domain FY148_14390 PF03484 tRNA synthetase B5 domain FY148_14390 PF03147 Ferredoxin-fold anticodon binding domain FY148_14390 PF01588 Putative tRNA binding domain FY148_14390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY148_14395 PF00248 Aldo/keto reductase family FY148_14400 PF03466 LysR substrate binding domain FY148_14400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_14410 PF00248 Aldo/keto reductase family FY148_14415 PF01965 DJ-1/PfpI family FY148_14415 PF12833 Helix-turn-helix domain FY148_14425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_14425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_14440 PF13742 OB-fold nucleic acid binding domain FY148_14440 PF02601 Exonuclease VII, large subunit FY148_14445 PF13378 Enolase C-terminal domain-like FY148_14445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_14450 PF07729 FCD domain FY148_14450 PF00392 Bacterial regulatory proteins, gntR family FY148_14455 PF01047 MarR family FY148_14460 PF00892 EamA-like transporter family FY148_14465 PF02073 Thermophilic metalloprotease (M29) FY148_14470 PF04073 Aminoacyl-tRNA editing domain FY148_14475 PF03960 ArsC family FY148_14490 PF00440 Bacterial regulatory proteins, tetR family FY148_14500 PF00958 GMP synthase C terminal domain FY148_14500 PF00117 Glutamine amidotransferase class-I FY148_14515 PF03073 TspO/MBR family FY148_14540 PF01189 16S rRNA methyltransferase RsmB/F FY148_14540 PF01029 NusB family FY148_14545 PF03330 Lytic transglycolase FY148_14555 PF08331 Domain of unknown function (DUF1730) FY148_14560 PF00043 Glutathione S-transferase, C-terminal domain FY148_14560 PF13417 Glutathione S-transferase, N-terminal domain FY148_14565 PF02673 Bacitracin resistance protein BacA FY148_14580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY148_14590 PF13649 Methyltransferase domain FY148_14595 PF00712 DNA polymerase III beta subunit, N-terminal domain FY148_14595 PF02767 DNA polymerase III beta subunit, central domain FY148_14595 PF02768 DNA polymerase III beta subunit, C-terminal domain FY148_14600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_14605 PF02021 Uncharacterised protein family UPF0102 FY148_14610 PF14602 Hexapeptide repeat of succinyl-transferase FY148_14610 PF12464 Maltose acetyltransferase FY148_14615 PF13416 Bacterial extracellular solute-binding protein FY148_14620 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14625 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14630 PF00005 ABC transporter FY148_14640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY148_14640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY148_14645 PF01078 Magnesium chelatase, subunit ChlI FY148_14645 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY148_14650 PF00291 Pyridoxal-phosphate dependent enzyme FY148_14655 PF01810 LysE type translocator FY148_14660 PF00692 dUTPase FY148_14665 PF03144 Elongation factor Tu domain 2 FY148_14665 PF16658 Class II release factor RF3, C-terminal domain FY148_14665 PF00009 Elongation factor Tu GTP binding domain FY148_14670 PF02441 Flavoprotein FY148_14670 PF04127 DNA / pantothenate metabolism flavoprotein FY148_14685 PF03109 ABC1 family FY148_14690 PF01209 ubiE/COQ5 methyltransferase family FY148_14695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY148_14695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY148_14695 PF06827 Zinc finger found in FPG and IleRS FY148_14700 PF00378 Enoyl-CoA hydratase/isomerase FY148_14705 PF01649 Ribosomal protein S20 FY148_14710 PF02794 RTX toxin acyltransferase family FY148_14720 PF00664 ABC transporter transmembrane region FY148_14720 PF00005 ABC transporter FY148_14720 PF03412 Peptidase C39 family FY148_14725 PF00529 HlyD membrane-fusion protein of T1SS FY148_14770 PF00005 ABC transporter FY148_14770 PF06472 ABC transporter transmembrane region 2 FY148_14795 PF01261 Xylose isomerase-like TIM barrel FY148_14800 PF00485 Phosphoribulokinase / Uridine kinase family FY148_14805 PF01261 Xylose isomerase-like TIM barrel FY148_14810 PF02653 Branched-chain amino acid transport system / permease component FY148_14815 PF02653 Branched-chain amino acid transport system / permease component FY148_14820 PF00005 ABC transporter FY148_14830 PF00356 Bacterial regulatory proteins, lacI family FY148_14840 PF00158 Sigma-54 interaction domain FY148_14840 PF01590 GAF domain FY148_14840 PF02954 Bacterial regulatory protein, Fis family FY148_14845 PF08240 Alcohol dehydrogenase GroES-like domain FY148_14845 PF00107 Zinc-binding dehydrogenase FY148_14855 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_14860 PF11791 Aconitate B N-terminal domain FY148_14860 PF06434 Aconitate hydratase 2 N-terminus FY148_14860 PF00330 Aconitase family (aconitate hydratase) FY148_14875 PF13953 PapC C-terminal domain FY148_14875 PF13954 PapC N-terminal domain FY148_14875 PF00577 Outer membrane usher protein FY148_14885 PF00005 ABC transporter FY148_14890 PF00005 ABC transporter FY148_14890 PF00664 ABC transporter transmembrane region FY148_14895 PF03401 Tripartite tricarboxylate transporter family receptor FY148_14900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY148_14900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY148_14910 PF05532 CsbD-like FY148_14930 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14935 PF00005 ABC transporter FY148_14935 PF08402 TOBE domain FY148_14945 PF00459 Inositol monophosphatase family FY148_14950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_14950 PF00005 ABC transporter FY148_14960 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14960 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_14965 PF00528 Binding-protein-dependent transport system inner membrane component FY148_14970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_14975 PF00392 Bacterial regulatory proteins, gntR family FY148_14975 PF07729 FCD domain FY148_14985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_14985 PF13378 Enolase C-terminal domain-like FY148_14990 PF00005 ABC transporter FY148_14990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_14995 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_14995 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15000 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_15010 PF07729 FCD domain FY148_15010 PF00392 Bacterial regulatory proteins, gntR family FY148_15015 PF08450 SMP-30/Gluconolactonase/LRE-like region FY148_15020 PF00701 Dihydrodipicolinate synthetase family FY148_15025 PF07690 Major Facilitator Superfamily FY148_15035 PF00037 4Fe-4S binding domain FY148_15035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY148_15035 PF00384 Molybdopterin oxidoreductase FY148_15035 PF01568 Molydopterin dinucleotide binding domain FY148_15035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY148_15040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY148_15040 PF00037 4Fe-4S binding domain FY148_15040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY148_15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_15050 PF03466 LysR substrate binding domain FY148_15055 PF01613 Flavin reductase like domain FY148_15060 PF02530 Porin subfamily FY148_15065 PF00563 EAL domain FY148_15065 PF00990 Diguanylate cyclase, GGDEF domain FY148_15065 PF03707 Bacterial signalling protein N terminal repeat FY148_15070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY148_15070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_15075 PF00005 ABC transporter FY148_15080 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15085 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15090 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_15100 PF00356 Bacterial regulatory proteins, lacI family FY148_15105 PF05544 Proline racemase FY148_15115 PF01266 FAD dependent oxidoreductase FY148_15120 PF00005 ABC transporter FY148_15125 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15130 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15140 PF02615 Malate/L-lactate dehydrogenase FY148_15145 PF00701 Dihydrodipicolinate synthetase family FY148_15150 PF07729 FCD domain FY148_15150 PF00392 Bacterial regulatory proteins, gntR family FY148_15155 PF12327 FtsZ family, C-terminal domain FY148_15155 PF00091 Tubulin/FtsZ family, GTPase domain FY148_15160 PF00072 Response regulator receiver domain FY148_15185 PF00005 ABC transporter FY148_15190 PF13533 Biotin-lipoyl like FY148_15195 PF02056 Family 4 glycosyl hydrolase FY148_15195 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY148_15200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_15200 PF00005 ABC transporter FY148_15205 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15205 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_15210 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_15220 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY148_15220 PF02056 Family 4 glycosyl hydrolase FY148_15245 PF00480 ROK family FY148_15250 PF13416 Bacterial extracellular solute-binding protein FY148_15255 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15260 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15265 PF00206 Lyase FY148_15265 PF14698 Argininosuccinate lyase C-terminal FY148_15270 PF08402 TOBE domain FY148_15270 PF00005 ABC transporter FY148_15275 PF00294 pfkB family carbohydrate kinase FY148_15280 PF00884 Sulfatase FY148_15280 PF12411 Choline sulfatase enzyme C terminal FY148_15285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY148_15290 PF03466 LysR substrate binding domain FY148_15290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_15295 PF00005 ABC transporter FY148_15300 PF01032 FecCD transport family FY148_15305 PF01032 FecCD transport family FY148_15315 PF00593 TonB dependent receptor FY148_15315 PF07715 TonB-dependent Receptor Plug Domain FY148_15320 PF12833 Helix-turn-helix domain FY148_15325 PF00141 Peroxidase FY148_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_15330 PF03466 LysR substrate binding domain FY148_15340 PF00672 HAMP domain FY148_15340 PF00512 His Kinase A (phospho-acceptor) domain FY148_15340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_15345 PF00072 Response regulator receiver domain FY148_15345 PF00486 Transcriptional regulatory protein, C terminal FY148_15350 PF00529 HlyD membrane-fusion protein of T1SS FY148_15350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_15355 PF00873 AcrB/AcrD/AcrF family FY148_15365 PF01865 Protein of unknown function DUF47 FY148_15370 PF01384 Phosphate transporter family FY148_15375 PF02735 Ku70/Ku80 beta-barrel domain FY148_15380 PF04679 ATP dependent DNA ligase C terminal region FY148_15380 PF01068 ATP dependent DNA ligase domain FY148_15380 PF13298 DNA polymerase Ligase (LigD) FY148_15385 PF02735 Ku70/Ku80 beta-barrel domain FY148_15400 PF00990 Diguanylate cyclase, GGDEF domain FY148_15400 PF00563 EAL domain FY148_15400 PF13188 PAS domain FY148_15400 PF03707 Bacterial signalling protein N terminal repeat FY148_15410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_15415 PF03786 D-mannonate dehydratase (UxuA) FY148_15425 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15430 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_15430 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15435 PF00005 ABC transporter FY148_15435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_15440 PF00005 ABC transporter FY148_15440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_15445 PF17912 MalK OB fold domain FY148_15445 PF03459 TOBE domain FY148_15445 PF00005 ABC transporter FY148_15450 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15455 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15465 PF01571 Aminomethyltransferase folate-binding domain FY148_15465 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY148_15465 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_15465 PF17806 Sarcosine oxidase A3 domain FY148_15470 PF00356 Bacterial regulatory proteins, lacI family FY148_15480 PF00580 UvrD/REP helicase N-terminal domain FY148_15480 PF13361 UvrD-like helicase C-terminal domain FY148_15485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY148_15490 PF16363 GDP-mannose 4,6 dehydratase FY148_15495 PF04321 RmlD substrate binding domain FY148_15500 PF00483 Nucleotidyl transferase FY148_15515 PF05045 Rhamnan synthesis protein F FY148_15545 PF01370 NAD dependent epimerase/dehydratase family FY148_15550 PF13580 SIS domain FY148_15555 PF01501 Glycosyl transferase family 8 FY148_15555 PF00535 Glycosyl transferase family 2 FY148_15565 PF03275 UDP-galactopyranose mutase FY148_15570 PF00664 ABC transporter transmembrane region FY148_15570 PF00005 ABC transporter FY148_15580 PF03466 LysR substrate binding domain FY148_15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_15585 PF00248 Aldo/keto reductase family FY148_15600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY148_15600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY148_15605 PF00037 4Fe-4S binding domain FY148_15605 PF11953 Domain of unknown function (DUF3470) FY148_15615 PF12833 Helix-turn-helix domain FY148_15615 PF12852 Cupin FY148_15620 PF00106 short chain dehydrogenase FY148_15625 PF03009 Glycerophosphoryl diester phosphodiesterase family FY148_15630 PF00480 ROK family FY148_15630 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY148_15640 PF16220 Domain of unknown function (DUF4880) FY148_15640 PF04773 FecR protein FY148_15645 PF00593 TonB dependent receptor FY148_15645 PF07715 TonB-dependent Receptor Plug Domain FY148_15650 PF07690 Major Facilitator Superfamily FY148_15670 PF07470 Glycosyl Hydrolase Family 88 FY148_15680 PF17912 MalK OB fold domain FY148_15680 PF00005 ABC transporter FY148_15685 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15690 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15695 PF00356 Bacterial regulatory proteins, lacI family FY148_15705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_15705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_15710 PF01261 Xylose isomerase-like TIM barrel FY148_15715 PF13407 Periplasmic binding protein domain FY148_15720 PF13407 Periplasmic binding protein domain FY148_15725 PF00356 Bacterial regulatory proteins, lacI family FY148_15730 PF00108 Thiolase, N-terminal domain FY148_15730 PF02803 Thiolase, C-terminal domain FY148_15735 PF01144 Coenzyme A transferase FY148_15740 PF01144 Coenzyme A transferase FY148_15745 PF01614 Bacterial transcriptional regulator FY148_15745 PF09339 IclR helix-turn-helix domain FY148_15755 PF01494 FAD binding domain FY148_15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_15760 PF03466 LysR substrate binding domain FY148_15765 PF00561 alpha/beta hydrolase fold FY148_15770 PF02627 Carboxymuconolactone decarboxylase family FY148_15775 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY148_15775 PF00775 Dioxygenase FY148_15780 PF00775 Dioxygenase FY148_15785 PF10397 Adenylosuccinate lyase C-terminus FY148_15785 PF00206 Lyase FY148_15790 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15795 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15800 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_15805 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_15810 PF00005 ABC transporter FY148_15815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY148_15815 PF08501 Shikimate dehydrogenase substrate binding domain FY148_15820 PF01220 Dehydroquinase class II FY148_15830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_15830 PF01261 Xylose isomerase-like TIM barrel FY148_15845 PF00005 ABC transporter FY148_15845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_15850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_15855 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15860 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_15860 PF00528 Binding-protein-dependent transport system inner membrane component FY148_15875 PF13458 Periplasmic binding protein FY148_15890 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_15890 PF00005 ABC transporter FY148_15895 PF00005 ABC transporter FY148_15905 PF00294 pfkB family carbohydrate kinase FY148_15910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY148_15910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY148_15910 PF00205 Thiamine pyrophosphate enzyme, central domain FY148_15915 PF01261 Xylose isomerase-like TIM barrel FY148_15920 PF04962 KduI/IolB family FY148_15925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_15925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_15930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_15930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY148_15935 PF00356 Bacterial regulatory proteins, lacI family FY148_15940 PF01047 MarR family FY148_15945 PF02633 Creatinine amidohydrolase FY148_15950 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY148_15950 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY148_15965 PF13505 Outer membrane protein beta-barrel domain FY148_15985 PF03824 High-affinity nickel-transport protein FY148_16005 PF01081 KDPG and KHG aldolase FY148_16010 PF01928 CYTH domain FY148_16020 PF00581 Rhodanese-like domain FY148_16020 PF17773 UPF0176 acylphosphatase like domain FY148_16025 PF00563 EAL domain FY148_16025 PF00990 Diguanylate cyclase, GGDEF domain FY148_16025 PF03707 Bacterial signalling protein N terminal repeat FY148_16025 PF13188 PAS domain FY148_16030 PF03180 NLPA lipoprotein FY148_16035 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16040 PF00005 ABC transporter FY148_16040 PF09383 NIL domain FY148_16045 PF00881 Nitroreductase family FY148_16050 PF00232 Glycosyl hydrolase family 1 FY148_16055 PF01261 Xylose isomerase-like TIM barrel FY148_16060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY148_16060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY148_16065 PF00356 Bacterial regulatory proteins, lacI family FY148_16065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY148_16075 PF07690 Major Facilitator Superfamily FY148_16080 PF13533 Biotin-lipoyl like FY148_16085 PF00440 Bacterial regulatory proteins, tetR family FY148_16090 PF03471 Transporter associated domain FY148_16090 PF03741 Integral membrane protein TerC family FY148_16095 PF03600 Citrate transporter FY148_16095 PF02080 TrkA-C domain FY148_16100 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY148_16105 PF01336 OB-fold nucleic acid binding domain FY148_16105 PF00152 tRNA synthetases class II (D, K and N) FY148_16110 PF01734 Patatin-like phospholipase FY148_16120 PF01297 Zinc-uptake complex component A periplasmic FY148_16125 PF00005 ABC transporter FY148_16130 PF00950 ABC 3 transport family FY148_16135 PF00950 ABC 3 transport family FY148_16150 PF09339 IclR helix-turn-helix domain FY148_16150 PF01614 Bacterial transcriptional regulator FY148_16155 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY148_16160 PF13936 Helix-turn-helix domain FY148_16160 PF04198 Putative sugar-binding domain FY148_16175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY148_16175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY148_16185 PF10576 Iron-sulfur binding domain of endonuclease III FY148_16185 PF00633 Helix-hairpin-helix motif FY148_16185 PF00730 HhH-GPD superfamily base excision DNA repair protein FY148_16200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY148_16200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY148_16205 PF13419 Haloacid dehalogenase-like hydrolase FY148_16210 PF01232 Mannitol dehydrogenase Rossmann domain FY148_16210 PF08125 Mannitol dehydrogenase C-terminal domain FY148_16220 PF00005 ABC transporter FY148_16220 PF08402 TOBE domain FY148_16225 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16230 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16240 PF04198 Putative sugar-binding domain FY148_16245 PF00005 ABC transporter FY148_16245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_16250 PF07687 Peptidase dimerisation domain FY148_16250 PF01546 Peptidase family M20/M25/M40 FY148_16255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_16260 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16265 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16265 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_16275 PF01965 DJ-1/PfpI family FY148_16280 PF01425 Amidase FY148_16285 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16285 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_16290 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_16300 PF03466 LysR substrate binding domain FY148_16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_16305 PF00005 ABC transporter FY148_16305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_16310 PF00005 ABC transporter FY148_16310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_16315 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_16315 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16320 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_16330 PF01244 Membrane dipeptidase (Peptidase family M19) FY148_16335 PF00156 Phosphoribosyl transferase domain FY148_16340 PF07687 Peptidase dimerisation domain FY148_16340 PF01546 Peptidase family M20/M25/M40 FY148_16345 PF07690 Major Facilitator Superfamily FY148_16350 PF03466 LysR substrate binding domain FY148_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_16355 PF13382 Adenine deaminase C-terminal domain FY148_16355 PF01979 Amidohydrolase family FY148_16365 PF00005 ABC transporter FY148_16365 PF08402 TOBE domain FY148_16375 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16385 PF00356 Bacterial regulatory proteins, lacI family FY148_16390 PF03466 LysR substrate binding domain FY148_16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_16395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_16395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_16395 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_16400 PF07715 TonB-dependent Receptor Plug Domain FY148_16410 PF00296 Luciferase-like monooxygenase FY148_16415 PF00005 ABC transporter FY148_16420 PF01032 FecCD transport family FY148_16425 PF01032 FecCD transport family FY148_16435 PF04954 Siderophore-interacting protein FY148_16435 PF08021 Siderophore-interacting FAD-binding domain FY148_16445 PF13193 AMP-binding enzyme C-terminal domain FY148_16445 PF00501 AMP-binding enzyme FY148_16445 PF00668 Condensation domain FY148_16445 PF00550 Phosphopantetheine attachment site FY148_16445 PF00975 Thioesterase domain FY148_16450 PF00501 AMP-binding enzyme FY148_16450 PF00550 Phosphopantetheine attachment site FY148_16450 PF00668 Condensation domain FY148_16450 PF00975 Thioesterase domain FY148_16455 PF00501 AMP-binding enzyme FY148_16455 PF13193 AMP-binding enzyme C-terminal domain FY148_16455 PF00668 Condensation domain FY148_16455 PF00550 Phosphopantetheine attachment site FY148_16460 PF00425 chorismate binding enzyme FY148_16465 PF00501 AMP-binding enzyme FY148_16465 PF13193 AMP-binding enzyme C-terminal domain FY148_16470 PF00857 Isochorismatase family FY148_16470 PF00550 Phosphopantetheine attachment site FY148_16480 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY148_16480 PF01648 4'-phosphopantetheinyl transferase superfamily FY148_16490 PF03264 NapC/NirT cytochrome c family, N-terminal region FY148_16495 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY148_16500 PF01568 Molydopterin dinucleotide binding domain FY148_16500 PF00384 Molybdopterin oxidoreductase FY148_16500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY148_16515 PF06796 Periplasmic nitrate reductase protein NapE FY148_16525 PF00005 ABC transporter FY148_16550 PF01136 Peptidase family U32 FY148_16560 PF04343 Protein of unknown function, DUF488 FY148_16565 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY148_16570 PF02441 Flavoprotein FY148_16580 PF00510 Cytochrome c oxidase subunit III FY148_16590 PF00034 Cytochrome c FY148_16595 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY148_16600 PF08406 CbbQ/NirQ/NorQ C-terminal FY148_16600 PF07728 AAA domain (dynein-related subfamily) FY148_16605 PF00092 von Willebrand factor type A domain FY148_16625 PF00394 Multicopper oxidase FY148_16625 PF07732 Multicopper oxidase FY148_16640 PF00034 Cytochrome c FY148_16660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_16660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_16670 PF00356 Bacterial regulatory proteins, lacI family FY148_16675 PF02653 Branched-chain amino acid transport system / permease component FY148_16680 PF02653 Branched-chain amino acid transport system / permease component FY148_16685 PF00005 ABC transporter FY148_16690 PF13407 Periplasmic binding protein domain FY148_16700 PF03466 LysR substrate binding domain FY148_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_16715 PF00356 Bacterial regulatory proteins, lacI family FY148_16720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_16720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_16725 PF01261 Xylose isomerase-like TIM barrel FY148_16730 PF13416 Bacterial extracellular solute-binding protein FY148_16735 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16740 PF00528 Binding-protein-dependent transport system inner membrane component FY148_16745 PF00005 ABC transporter FY148_16745 PF17912 MalK OB fold domain FY148_16745 PF03459 TOBE domain FY148_16760 PF03741 Integral membrane protein TerC family FY148_16760 PF03471 Transporter associated domain FY148_16765 PF00356 Bacterial regulatory proteins, lacI family FY148_16780 PF00459 Inositol monophosphatase family FY148_16785 PF13188 PAS domain FY148_16785 PF00563 EAL domain FY148_16785 PF00990 Diguanylate cyclase, GGDEF domain FY148_16785 PF03707 Bacterial signalling protein N terminal repeat FY148_16810 PF04717 Type VI secretion system, phage-baseplate injector FY148_16830 PF00004 ATPase family associated with various cellular activities (AAA) FY148_16830 PF17871 AAA lid domain FY148_16830 PF07724 AAA domain (Cdc48 subfamily) FY148_16830 PF10431 C-terminal, D2-small domain, of ClpB protein FY148_16840 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY148_16845 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY148_16865 PF05947 Type VI secretion system, TssF FY148_16880 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY148_16885 PF00691 OmpA family FY148_16890 PF14331 ImcF-related N-terminal domain FY148_16890 PF06744 Type VI secretion protein IcmF C-terminal FY148_16890 PF06761 Intracellular multiplication and human macrophage-killing FY148_16905 PF02563 Polysaccharide biosynthesis/export protein FY148_16915 PF08946 Osmosensory transporter coiled coil FY148_16915 PF00083 Sugar (and other) transporter FY148_16925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY148_16925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY148_16930 PF00106 short chain dehydrogenase FY148_16935 PF02653 Branched-chain amino acid transport system / permease component FY148_16940 PF00005 ABC transporter FY148_16945 PF13407 Periplasmic binding protein domain FY148_16950 PF12833 Helix-turn-helix domain FY148_16955 PF00107 Zinc-binding dehydrogenase FY148_16955 PF08240 Alcohol dehydrogenase GroES-like domain FY148_16970 PF00005 ABC transporter FY148_16980 PF00245 Alkaline phosphatase FY148_16985 PF00440 Bacterial regulatory proteins, tetR family FY148_16995 PF00551 Formyl transferase FY148_17000 PF00464 Serine hydroxymethyltransferase FY148_17010 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY148_17010 PF01571 Aminomethyltransferase folate-binding domain FY148_17010 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_17010 PF17806 Sarcosine oxidase A3 domain FY148_17020 PF01266 FAD dependent oxidoreductase FY148_17035 PF00701 Dihydrodipicolinate synthetase family FY148_17040 PF00171 Aldehyde dehydrogenase family FY148_17045 PF01266 FAD dependent oxidoreductase FY148_17055 PF00571 CBS domain FY148_17055 PF00005 ABC transporter FY148_17060 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17065 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17070 PF05544 Proline racemase FY148_17075 PF03807 NADP oxidoreductase coenzyme F420-dependent FY148_17075 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY148_17085 PF00175 Oxidoreductase NAD-binding domain FY148_17085 PF00970 Oxidoreductase FAD-binding domain FY148_17085 PF00111 2Fe-2S iron-sulfur cluster binding domain FY148_17090 PF00355 Rieske [2Fe-2S] domain FY148_17090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY148_17110 PF01638 HxlR-like helix-turn-helix FY148_17120 PF07969 Amidohydrolase family FY148_17135 PF00005 ABC transporter FY148_17160 PF07690 Major Facilitator Superfamily FY148_17170 PF01979 Amidohydrolase family FY148_17175 PF11799 impB/mucB/samB family C-terminal domain FY148_17175 PF00817 impB/mucB/samB family FY148_17195 PF00005 ABC transporter FY148_17195 PF17912 MalK OB fold domain FY148_17200 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17205 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17230 PF00455 DeoR C terminal sensor domain FY148_17230 PF08220 DeoR-like helix-turn-helix domain FY148_17235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY148_17235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY148_17240 PF00005 ABC transporter FY148_17245 PF02653 Branched-chain amino acid transport system / permease component FY148_17250 PF13407 Periplasmic binding protein domain FY148_17255 PF00480 ROK family FY148_17255 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY148_17265 PF01177 Asp/Glu/Hydantoin racemase FY148_17270 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17275 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17285 PF08402 TOBE domain FY148_17285 PF00005 ABC transporter FY148_17305 PF00196 Bacterial regulatory proteins, luxR family FY148_17315 PF00512 His Kinase A (phospho-acceptor) domain FY148_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_17315 PF00672 HAMP domain FY148_17320 PF00072 Response regulator receiver domain FY148_17320 PF00486 Transcriptional regulatory protein, C terminal FY148_17340 PF12704 MacB-like periplasmic core domain FY148_17340 PF02687 FtsX-like permease family FY148_17340 PF00005 ABC transporter FY148_17350 PF03466 LysR substrate binding domain FY148_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_17360 PF00510 Cytochrome c oxidase subunit III FY148_17365 PF00510 Cytochrome c oxidase subunit III FY148_17370 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY148_17375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY148_17380 PF00034 Cytochrome c FY148_17390 PF02910 Fumarate reductase flavoprotein C-term FY148_17390 PF00890 FAD binding domain FY148_17395 PF05199 GMC oxidoreductase FY148_17395 PF00732 GMC oxidoreductase FY148_17400 PF05199 GMC oxidoreductase FY148_17400 PF00732 GMC oxidoreductase FY148_17405 PF17912 MalK OB fold domain FY148_17405 PF03459 TOBE domain FY148_17405 PF00005 ABC transporter FY148_17410 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17415 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17420 PF01547 Bacterial extracellular solute-binding protein FY148_17425 PF00171 Aldehyde dehydrogenase family FY148_17430 PF00378 Enoyl-CoA hydratase/isomerase FY148_17435 PF01144 Coenzyme A transferase FY148_17440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_17440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_17445 PF00356 Bacterial regulatory proteins, lacI family FY148_17450 PF03928 Haem-degrading FY148_17455 PF07715 TonB-dependent Receptor Plug Domain FY148_17460 PF01497 Periplasmic binding protein FY148_17465 PF01032 FecCD transport family FY148_17470 PF01032 FecCD transport family FY148_17475 PF00005 ABC transporter FY148_17490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY148_17490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY148_17495 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_17495 PF04324 BFD-like [2Fe-2S] binding domain FY148_17500 PF04324 BFD-like [2Fe-2S] binding domain FY148_17500 PF01266 FAD dependent oxidoreductase FY148_17505 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17510 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17515 PF08402 TOBE domain FY148_17515 PF00005 ABC transporter FY148_17530 PF00795 Carbon-nitrogen hydrolase FY148_17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_17535 PF03466 LysR substrate binding domain FY148_17540 PF00857 Isochorismatase family FY148_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_17545 PF03466 LysR substrate binding domain FY148_17555 PF03466 LysR substrate binding domain FY148_17555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_17560 PF05163 DinB family FY148_17565 PF00293 NUDIX domain FY148_17570 PF02567 Phenazine biosynthesis-like protein FY148_17585 PF00155 Aminotransferase class I and II FY148_17585 PF00392 Bacterial regulatory proteins, gntR family FY148_17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_17595 PF03466 LysR substrate binding domain FY148_17610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_17615 PF00881 Nitroreductase family FY148_17630 PF01323 DSBA-like thioredoxin domain FY148_17635 PF01565 FAD binding domain FY148_17635 PF02913 FAD linked oxidases, C-terminal domain FY148_17640 PF00384 Molybdopterin oxidoreductase FY148_17640 PF01568 Molydopterin dinucleotide binding domain FY148_17645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_17650 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17655 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17655 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_17660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_17660 PF00005 ABC transporter FY148_17670 PF00296 Luciferase-like monooxygenase FY148_17675 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY148_17680 PF03358 NADPH-dependent FMN reductase FY148_17695 PF01053 Cys/Met metabolism PLP-dependent enzyme FY148_17700 PF01037 Lrp/AsnC ligand binding domain FY148_17705 PF02733 Dak1 domain FY148_17735 PF02796 Helix-turn-helix domain of resolvase FY148_17735 PF00239 Resolvase, N terminal domain FY148_17775 PF02534 Type IV secretory system Conjugative DNA transfer FY148_17785 PF17841 BID domain of Bartonella effector protein (Bep) FY148_17785 PF03389 MobA/MobL family FY148_17785 PF01443 Viral (Superfamily 1) RNA helicase FY148_17810 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY148_17850 PF10145 Phage-related minor tail protein FY148_17850 PF01551 Peptidase family M23 FY148_17850 PF01464 Transglycosylase SLT domain FY148_17855 PF17871 AAA lid domain FY148_17855 PF02861 Clp amino terminal domain, pathogenicity island component FY148_17855 PF10431 C-terminal, D2-small domain, of ClpB protein FY148_17855 PF07724 AAA domain (Cdc48 subfamily) FY148_17855 PF00004 ATPase family associated with various cellular activities (AAA) FY148_17865 PF05175 Methyltransferase small domain FY148_17865 PF17827 PrmC N-terminal domain FY148_17870 PF03462 PCRF domain FY148_17870 PF00472 RF-1 domain FY148_17875 PF02896 PEP-utilising enzyme, TIM barrel domain FY148_17875 PF05524 PEP-utilising enzyme, N-terminal FY148_17875 PF00391 PEP-utilising enzyme, mobile domain FY148_17875 PF01590 GAF domain FY148_17880 PF00696 Amino acid kinase family FY148_17880 PF01842 ACT domain FY148_17880 PF13840 ACT domain FY148_17885 PF00271 Helicase conserved C-terminal domain FY148_17885 PF00270 DEAD/DEAH box helicase FY148_17890 PF16653 Saccharopine dehydrogenase C-terminal domain FY148_17890 PF03435 Saccharopine dehydrogenase NADP binding domain FY148_17895 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY148_17910 PF16363 GDP-mannose 4,6 dehydratase FY148_17920 PF13581 Histidine kinase-like ATPase domain FY148_17920 PF07536 HWE histidine kinase FY148_17920 PF13426 PAS domain FY148_17925 PF13426 PAS domain FY148_17925 PF07536 HWE histidine kinase FY148_17925 PF08447 PAS fold FY148_17930 PF00072 Response regulator receiver domain FY148_17940 PF08281 Sigma-70, region 4 FY148_17940 PF04542 Sigma-70 region 2 FY148_17945 PF01037 Lrp/AsnC ligand binding domain FY148_17950 PF00171 Aldehyde dehydrogenase family FY148_17950 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY148_17950 PF01619 Proline dehydrogenase FY148_17950 PF14850 DNA-binding domain of Proline dehydrogenase FY148_17955 PF00005 ABC transporter FY148_17960 PF00528 Binding-protein-dependent transport system inner membrane component FY148_17965 PF09084 NMT1/THI5 like FY148_17970 PF00171 Aldehyde dehydrogenase family FY148_17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_17975 PF03466 LysR substrate binding domain FY148_17980 PF13409 Glutathione S-transferase, N-terminal domain FY148_17995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY148_17995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY148_17995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY148_18000 PF16363 GDP-mannose 4,6 dehydratase FY148_18005 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY148_18005 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY148_18025 PF01965 DJ-1/PfpI family FY148_18045 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY148_18045 PF01266 FAD dependent oxidoreductase FY148_18055 PF05974 Domain of unknown function (DUF892) FY148_18060 PF01011 PQQ enzyme repeat FY148_18080 PF00501 AMP-binding enzyme FY148_18080 PF13193 AMP-binding enzyme C-terminal domain FY148_18085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY148_18085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY148_18090 PF05199 GMC oxidoreductase FY148_18090 PF00732 GMC oxidoreductase FY148_18095 PF02653 Branched-chain amino acid transport system / permease component FY148_18095 PF11862 Domain of unknown function (DUF3382) FY148_18100 PF02653 Branched-chain amino acid transport system / permease component FY148_18105 PF00005 ABC transporter FY148_18110 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_18110 PF00005 ABC transporter FY148_18125 PF00296 Luciferase-like monooxygenase FY148_18130 PF13378 Enolase C-terminal domain-like FY148_18130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_18135 PF00392 Bacterial regulatory proteins, gntR family FY148_18135 PF07729 FCD domain FY148_18140 PF01232 Mannitol dehydrogenase Rossmann domain FY148_18140 PF08125 Mannitol dehydrogenase C-terminal domain FY148_18145 PF00005 ABC transporter FY148_18145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_18150 PF00005 ABC transporter FY148_18150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_18155 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_18155 PF00528 Binding-protein-dependent transport system inner membrane component FY148_18160 PF00528 Binding-protein-dependent transport system inner membrane component FY148_18165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_18170 PF01321 Creatinase/Prolidase N-terminal domain FY148_18170 PF00557 Metallopeptidase family M24 FY148_18175 PF00106 short chain dehydrogenase FY148_18205 PF00575 S1 RNA binding domain FY148_18210 PF02224 Cytidylate kinase FY148_18240 PF02445 Quinolinate synthetase A protein FY148_18245 PF02910 Fumarate reductase flavoprotein C-term FY148_18245 PF00890 FAD binding domain FY148_18250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY148_18250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY148_18270 PF08173 Membrane bound YbgT-like protein FY148_18275 PF02322 Cytochrome bd terminal oxidase subunit II FY148_18280 PF01654 Cytochrome bd terminal oxidase subunit I FY148_18285 PF00664 ABC transporter transmembrane region FY148_18285 PF00005 ABC transporter FY148_18290 PF00664 ABC transporter transmembrane region FY148_18290 PF00005 ABC transporter FY148_18300 PF00107 Zinc-binding dehydrogenase FY148_18300 PF08240 Alcohol dehydrogenase GroES-like domain FY148_18310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY148_18310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY148_18320 PF01037 Lrp/AsnC ligand binding domain FY148_18325 PF01177 Asp/Glu/Hydantoin racemase FY148_18340 PF00343 Carbohydrate phosphorylase FY148_18345 PF00128 Alpha amylase, catalytic domain FY148_18345 PF02806 Alpha amylase, C-terminal all-beta domain FY148_18345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY148_18350 PF00483 Nucleotidyl transferase FY148_18355 PF00534 Glycosyl transferases group 1 FY148_18355 PF08323 Starch synthase catalytic domain FY148_18360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY148_18360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY148_18360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY148_18360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY148_18365 PF18390 Glycogen debranching enzyme C-terminal domain FY148_18365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY148_18365 PF00128 Alpha amylase, catalytic domain FY148_18370 PF01575 MaoC like domain FY148_18395 PF17806 Sarcosine oxidase A3 domain FY148_18395 PF01571 Aminomethyltransferase folate-binding domain FY148_18395 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY148_18395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_18410 PF01266 FAD dependent oxidoreductase FY148_18415 PF01165 Ribosomal protein S21 FY148_18430 PF11089 Exopolysaccharide production repressor FY148_18435 PF00535 Glycosyl transferase family 2 FY148_18440 PF04230 Polysaccharide pyruvyl transferase FY148_18445 PF00535 Glycosyl transferase family 2 FY148_18450 PF01943 Polysaccharide biosynthesis protein FY148_18455 PF01757 Acyltransferase family FY148_18460 PF00722 Glycosyl hydrolases family 16 FY148_18470 PF00535 Glycosyl transferase family 2 FY148_18475 PF00535 Glycosyl transferase family 2 FY148_18480 PF00535 Glycosyl transferase family 2 FY148_18485 PF00483 Nucleotidyl transferase FY148_18490 PF02706 Chain length determinant protein FY148_18490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY148_18490 PF13807 G-rich domain on putative tyrosine kinase FY148_18495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_18500 PF00072 Response regulator receiver domain FY148_18500 PF13426 PAS domain FY148_18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_18515 PF00528 Binding-protein-dependent transport system inner membrane component FY148_18520 PF00571 CBS domain FY148_18520 PF00005 ABC transporter FY148_18525 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_18525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY148_18530 PF01205 Uncharacterized protein family UPF0029 FY148_18535 PF00849 RNA pseudouridylate synthase FY148_18540 PF04445 Putative SAM-dependent methyltransferase FY148_18550 PF07995 Glucose / Sorbosone dehydrogenase FY148_18560 PF00196 Bacterial regulatory proteins, luxR family FY148_18560 PF00072 Response regulator receiver domain FY148_18565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_18565 PF07730 Histidine kinase FY148_18570 PF13407 Periplasmic binding protein domain FY148_18575 PF00005 ABC transporter FY148_18580 PF02653 Branched-chain amino acid transport system / permease component FY148_18590 PF08450 SMP-30/Gluconolactonase/LRE-like region FY148_18595 PF02631 RecX family FY148_18600 PF00034 Cytochrome c FY148_18610 PF00005 ABC transporter FY148_18615 PF01032 FecCD transport family FY148_18625 PF00593 TonB dependent receptor FY148_18625 PF07715 TonB-dependent Receptor Plug Domain FY148_18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_18630 PF03466 LysR substrate binding domain FY148_18640 PF08019 Phosphoethanolamine transferase EptA/EptB FY148_18640 PF00884 Sulfatase FY148_18645 PF00072 Response regulator receiver domain FY148_18645 PF00486 Transcriptional regulatory protein, C terminal FY148_18650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_18650 PF00512 His Kinase A (phospho-acceptor) domain FY148_18655 PF00083 Sugar (and other) transporter FY148_18660 PF07756 Protein of unknown function (DUF1612) FY148_18660 PF11972 HTH DNA binding domain FY148_18670 PF00672 HAMP domain FY148_18670 PF00211 Adenylate and Guanylate cyclase catalytic domain FY148_18680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_18680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_18685 PF00892 EamA-like transporter family FY148_18690 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY148_18695 PF00491 Arginase family FY148_18710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY148_18710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY148_18715 PF00202 Aminotransferase class-III FY148_18725 PF00155 Aminotransferase class I and II FY148_18730 PF04055 Radical SAM superfamily FY148_18730 PF06968 Biotin and Thiamin Synthesis associated domain FY148_18735 PF13673 Acetyltransferase (GNAT) domain FY148_18780 PF01569 PAP2 superfamily FY148_18785 PF00072 Response regulator receiver domain FY148_18785 PF00486 Transcriptional regulatory protein, C terminal FY148_18790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_18790 PF00512 His Kinase A (phospho-acceptor) domain FY148_18790 PF00672 HAMP domain FY148_18800 PF07690 Major Facilitator Superfamily FY148_18805 PF03466 LysR substrate binding domain FY148_18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_18825 PF07969 Amidohydrolase family FY148_18840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_18845 PF03466 LysR substrate binding domain FY148_18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_18850 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY148_18860 PF07690 Major Facilitator Superfamily FY148_18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_18865 PF03466 LysR substrate binding domain FY148_18875 PF00535 Glycosyl transferase family 2 FY148_18885 PF03275 UDP-galactopyranose mutase FY148_18895 PF00672 HAMP domain FY148_18895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_18910 PF00528 Binding-protein-dependent transport system inner membrane component FY148_18915 PF00005 ABC transporter FY148_18925 PF04303 PrpF protein FY148_18930 PF03466 LysR substrate binding domain FY148_18930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_18935 PF01047 MarR family FY148_18965 PF00440 Bacterial regulatory proteins, tetR family FY148_18970 PF02311 AraC-like ligand binding domain FY148_18970 PF12833 Helix-turn-helix domain FY148_18985 PF13533 Biotin-lipoyl like FY148_18995 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19000 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_19010 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19015 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_19015 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_19020 PF00005 ABC transporter FY148_19025 PF00106 short chain dehydrogenase FY148_19030 PF02798 Glutathione S-transferase, N-terminal domain FY148_19035 PF00873 AcrB/AcrD/AcrF family FY148_19040 PF13533 Biotin-lipoyl like FY148_19045 PF00440 Bacterial regulatory proteins, tetR family FY148_19050 PF00109 Beta-ketoacyl synthase, N-terminal domain FY148_19050 PF02801 Beta-ketoacyl synthase, C-terminal domain FY148_19055 PF00091 Tubulin/FtsZ family, GTPase domain FY148_19055 PF12327 FtsZ family, C-terminal domain FY148_19070 PF01554 MatE FY148_19090 PF00753 Metallo-beta-lactamase superfamily FY148_19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_19095 PF03466 LysR substrate binding domain FY148_19105 PF01638 HxlR-like helix-turn-helix FY148_19115 PF12704 MacB-like periplasmic core domain FY148_19115 PF00005 ABC transporter FY148_19115 PF02687 FtsX-like permease family FY148_19120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_19125 PF00512 His Kinase A (phospho-acceptor) domain FY148_19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_19125 PF00989 PAS fold FY148_19125 PF11808 Phosphate regulon sensor protein PhoR FY148_19130 PF00072 Response regulator receiver domain FY148_19130 PF00486 Transcriptional regulatory protein, C terminal FY148_19150 PF03527 RHS protein FY148_19150 PF05593 RHS Repeat FY148_19170 PF04717 Type VI secretion system, phage-baseplate injector FY148_19180 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19180 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_19205 PF02661 Fic/DOC family FY148_19205 PF13784 Fic/DOC family N-terminal FY148_19220 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_19225 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19230 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_19260 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19265 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19265 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_19270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_19270 PF00005 ABC transporter FY148_19275 PF00005 ABC transporter FY148_19275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_19285 PF00890 FAD binding domain FY148_19285 PF02910 Fumarate reductase flavoprotein C-term FY148_19295 PF13407 Periplasmic binding protein domain FY148_19300 PF00005 ABC transporter FY148_19305 PF02653 Branched-chain amino acid transport system / permease component FY148_19320 PF00248 Aldo/keto reductase family FY148_19325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_19325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY148_19325 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_19330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY148_19330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_19340 PF00296 Luciferase-like monooxygenase FY148_19345 PF02653 Branched-chain amino acid transport system / permease component FY148_19350 PF02653 Branched-chain amino acid transport system / permease component FY148_19355 PF00005 ABC transporter FY148_19365 PF00296 Luciferase-like monooxygenase FY148_19370 PF00005 ABC transporter FY148_19370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_19375 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19375 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_19380 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_19390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_19395 PF00296 Luciferase-like monooxygenase FY148_19405 PF00296 Luciferase-like monooxygenase FY148_19410 PF00296 Luciferase-like monooxygenase FY148_19415 PF00291 Pyridoxal-phosphate dependent enzyme FY148_19430 PF13635 Domain of unknown function (DUF4143) FY148_19430 PF13173 AAA domain FY148_19440 PF01850 PIN domain FY148_19445 PF00701 Dihydrodipicolinate synthetase family FY148_19450 PF00155 Aminotransferase class I and II FY148_19460 PF05378 Hydantoinase/oxoprolinase N-terminal region FY148_19460 PF01968 Hydantoinase/oxoprolinase FY148_19465 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_19470 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19475 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19480 PF00005 ABC transporter FY148_19490 PF00392 Bacterial regulatory proteins, gntR family FY148_19490 PF07729 FCD domain FY148_19510 PF01047 MarR family FY148_19525 PF03466 LysR substrate binding domain FY148_19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_19530 PF00106 short chain dehydrogenase FY148_19550 PF00171 Aldehyde dehydrogenase family FY148_19555 PF00107 Zinc-binding dehydrogenase FY148_19555 PF08240 Alcohol dehydrogenase GroES-like domain FY148_19560 PF03466 LysR substrate binding domain FY148_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_19580 PF01810 LysE type translocator FY148_19585 PF07536 HWE histidine kinase FY148_19585 PF13426 PAS domain FY148_19585 PF13581 Histidine kinase-like ATPase domain FY148_19610 PF00199 Catalase FY148_19610 PF06628 Catalase-related immune-responsive FY148_19610 PF18011 C-terminal domain found in long catalases FY148_19630 PF00313 'Cold-shock' DNA-binding domain FY148_19655 PF08240 Alcohol dehydrogenase GroES-like domain FY148_19655 PF00107 Zinc-binding dehydrogenase FY148_19660 PF00561 alpha/beta hydrolase fold FY148_19665 PF00106 short chain dehydrogenase FY148_19670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY148_19675 PF00106 short chain dehydrogenase FY148_19680 PF00440 Bacterial regulatory proteins, tetR family FY148_19695 PF01810 LysE type translocator FY148_19705 PF02525 Flavodoxin-like fold FY148_19755 PF01979 Amidohydrolase family FY148_19760 PF01979 Amidohydrolase family FY148_19765 PF00221 Aromatic amino acid lyase FY148_19775 PF01175 Urocanase Rossmann-like domain FY148_19775 PF17392 Urocanase C-terminal domain FY148_19775 PF17391 Urocanase N-terminal domain FY148_19780 PF05962 HutD FY148_19785 PF07171 MlrC C-terminus FY148_19785 PF07364 Metallopeptidase family M81 FY148_19790 PF14031 Putative serine dehydratase domain FY148_19790 PF01168 Alanine racemase, N-terminal domain FY148_19795 PF01042 Endoribonuclease L-PSP FY148_19805 PF13614 AAA domain FY148_19810 PF02195 ParB-like nuclease domain FY148_19810 PF07506 RepB plasmid partitioning protein FY148_19815 PF03428 Replication protein C N-terminal domain FY148_19815 PF11800 Replication protein C C-terminal region FY148_19830 PF06772 Bacterial low temperature requirement A protein (LtrA) FY148_19835 PF02885 Glycosyl transferase family, helical bundle domain FY148_19835 PF00591 Glycosyl transferase family, a/b domain FY148_19840 PF07715 TonB-dependent Receptor Plug Domain FY148_19840 PF00593 TonB dependent receptor FY148_19845 PF09278 MerR, DNA binding FY148_19845 PF00376 MerR family regulatory protein FY148_19850 PF02806 Alpha amylase, C-terminal all-beta domain FY148_19850 PF00128 Alpha amylase, catalytic domain FY148_19855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_19855 PF02785 Biotin carboxylase C-terminal domain FY148_19855 PF00289 Biotin carboxylase, N-terminal domain FY148_19855 PF00364 Biotin-requiring enzyme FY148_19860 PF02682 Carboxyltransferase domain, subdomain C and D FY148_19865 PF07286 Protein of unknown function (DUF1445) FY148_19870 PF03746 LamB/YcsF family FY148_19875 PF01566 Natural resistance-associated macrophage protein FY148_19880 PF07729 FCD domain FY148_19880 PF00392 Bacterial regulatory proteins, gntR family FY148_19885 PF03861 ANTAR domain FY148_19885 PF08376 Nitrate and nitrite sensing FY148_19900 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19905 PF00005 ABC transporter FY148_19910 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY148_19910 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_19910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY148_19910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY148_19910 PF04324 BFD-like [2Fe-2S] binding domain FY148_19920 PF01568 Molydopterin dinucleotide binding domain FY148_19920 PF00384 Molybdopterin oxidoreductase FY148_19920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY148_19920 PF04324 BFD-like [2Fe-2S] binding domain FY148_19925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY148_19925 PF10414 Sirohaem synthase dimerisation region FY148_19925 PF14824 Sirohaem biosynthesis protein central FY148_19930 PF00455 DeoR C terminal sensor domain FY148_19930 PF08220 DeoR-like helix-turn-helix domain FY148_19935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY148_19935 PF01266 FAD dependent oxidoreductase FY148_19940 PF00005 ABC transporter FY148_19940 PF17912 MalK OB fold domain FY148_19945 PF17912 MalK OB fold domain FY148_19945 PF00005 ABC transporter FY148_19950 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19955 PF00528 Binding-protein-dependent transport system inner membrane component FY148_19970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY148_19970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY148_19975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_19975 PF03466 LysR substrate binding domain FY148_19980 PF13593 SBF-like CPA transporter family (DUF4137) FY148_19985 PF00011 Hsp20/alpha crystallin family FY148_20000 PF00459 Inositol monophosphatase family FY148_20010 PF00072 Response regulator receiver domain FY148_20030 PF13407 Periplasmic binding protein domain FY148_20035 PF00005 ABC transporter FY148_20040 PF02653 Branched-chain amino acid transport system / permease component FY148_20050 PF00248 Aldo/keto reductase family FY148_20055 PF01266 FAD dependent oxidoreductase FY148_20055 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY148_20060 PF01791 DeoC/LacD family aldolase FY148_20065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY148_20065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY148_20070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_20070 PF00672 HAMP domain FY148_20075 PF03466 LysR substrate binding domain FY148_20075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_20080 PF00300 Histidine phosphatase superfamily (branch 1) FY148_20080 PF00106 short chain dehydrogenase FY148_20085 PF00155 Aminotransferase class I and II FY148_20090 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20095 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20105 PF00005 ABC transporter FY148_20105 PF08402 TOBE domain FY148_20110 PF03746 LamB/YcsF family FY148_20115 PF02626 Carboxyltransferase domain, subdomain A and B FY148_20120 PF02682 Carboxyltransferase domain, subdomain C and D FY148_20130 PF00289 Biotin carboxylase, N-terminal domain FY148_20130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_20130 PF02785 Biotin carboxylase C-terminal domain FY148_20135 PF00364 Biotin-requiring enzyme FY148_20140 PF00892 EamA-like transporter family FY148_20145 PF00892 EamA-like transporter family FY148_20150 PF03466 LysR substrate binding domain FY148_20150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_20155 PF03401 Tripartite tricarboxylate transporter family receptor FY148_20160 PF03737 Aldolase/RraA FY148_20170 PF01970 Tripartite tricarboxylate transporter TctA family FY148_20175 PF01370 NAD dependent epimerase/dehydratase family FY148_20185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_20185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY148_20190 PF00106 short chain dehydrogenase FY148_20195 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20200 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20205 PF00005 ABC transporter FY148_20210 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_20215 PF03737 Aldolase/RraA FY148_20220 PF08240 Alcohol dehydrogenase GroES-like domain FY148_20220 PF00107 Zinc-binding dehydrogenase FY148_20235 PF01070 FMN-dependent dehydrogenase FY148_20240 PF14602 Hexapeptide repeat of succinyl-transferase FY148_20240 PF00132 Bacterial transferase hexapeptide (six repeats) FY148_20240 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY148_20250 PF01547 Bacterial extracellular solute-binding protein FY148_20260 PF17912 MalK OB fold domain FY148_20260 PF03459 TOBE domain FY148_20260 PF00005 ABC transporter FY148_20265 PF07470 Glycosyl Hydrolase Family 88 FY148_20270 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20275 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20290 PF00392 Bacterial regulatory proteins, gntR family FY148_20290 PF07729 FCD domain FY148_20295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY148_20295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_20300 PF12848 ABC transporter FY148_20300 PF00005 ABC transporter FY148_20310 PF08379 Bacterial transglutaminase-like N-terminal region FY148_20310 PF01841 Transglutaminase-like superfamily FY148_20315 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY148_20315 PF14403 Circularly permuted ATP-grasp type 2 FY148_20335 PF03061 Thioesterase superfamily FY148_20350 PF07729 FCD domain FY148_20350 PF00392 Bacterial regulatory proteins, gntR family FY148_20355 PF00465 Iron-containing alcohol dehydrogenase FY148_20360 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY148_20370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_20375 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20380 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20380 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_20385 PF00005 ABC transporter FY148_20385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_20390 PF00701 Dihydrodipicolinate synthetase family FY148_20400 PF01966 HD domain FY148_20410 PF00589 Phage integrase family FY148_20425 PF00239 Resolvase, N terminal domain FY148_20425 PF02796 Helix-turn-helix domain of resolvase FY148_20445 PF08463 EcoEI R protein C-terminal FY148_20445 PF00271 Helicase conserved C-terminal domain FY148_20445 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FY148_20445 PF04851 Type III restriction enzyme, res subunit FY148_20450 PF01420 Type I restriction modification DNA specificity domain FY148_20455 PF12161 HsdM N-terminal domain FY148_20455 PF02384 N-6 DNA Methylase FY148_20475 PF01261 Xylose isomerase-like TIM barrel FY148_20480 PF01261 Xylose isomerase-like TIM barrel FY148_20485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_20485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_20490 PF01261 Xylose isomerase-like TIM barrel FY148_20495 PF00005 ABC transporter FY148_20500 PF02653 Branched-chain amino acid transport system / permease component FY148_20510 PF00356 Bacterial regulatory proteins, lacI family FY148_20515 PF00221 Aromatic amino acid lyase FY148_20520 PF00571 CBS domain FY148_20520 PF00005 ABC transporter FY148_20525 PF00528 Binding-protein-dependent transport system inner membrane component FY148_20540 PF00392 Bacterial regulatory proteins, gntR family FY148_20540 PF07702 UTRA domain FY148_20545 PF13977 BetI-type transcriptional repressor, C-terminal FY148_20545 PF00440 Bacterial regulatory proteins, tetR family FY148_20550 PF00529 HlyD membrane-fusion protein of T1SS FY148_20550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_20560 PF00873 AcrB/AcrD/AcrF family FY148_20565 PF07729 FCD domain FY148_20565 PF00392 Bacterial regulatory proteins, gntR family FY148_20570 PF10415 Fumarase C C-terminus FY148_20570 PF00206 Lyase FY148_20575 PF00324 Amino acid permease FY148_20580 PF00710 Asparaginase, N-terminal FY148_20580 PF17763 Glutaminase/Asparaginase C-terminal domain FY148_20590 PF03814 Potassium-transporting ATPase A subunit FY148_20600 PF02669 K+-transporting ATPase, c chain FY148_20605 PF13492 GAF domain FY148_20605 PF02702 Osmosensitive K+ channel His kinase sensor domain FY148_20605 PF00512 His Kinase A (phospho-acceptor) domain FY148_20605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_20605 PF13493 Domain of unknown function (DUF4118) FY148_20610 PF00486 Transcriptional regulatory protein, C terminal FY148_20610 PF00072 Response regulator receiver domain FY148_20615 PF01212 Beta-eliminating lyase FY148_20620 PF00310 Glutamine amidotransferases class-II FY148_20620 PF01645 Conserved region in glutamate synthase FY148_20620 PF04898 Glutamate synthase central domain FY148_20620 PF01493 GXGXG motif FY148_20630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY148_20630 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_20635 PF00512 His Kinase A (phospho-acceptor) domain FY148_20635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_20635 PF00672 HAMP domain FY148_20640 PF00486 Transcriptional regulatory protein, C terminal FY148_20640 PF00072 Response regulator receiver domain FY148_20650 PF13406 Transglycosylase SLT domain FY148_20655 PF00483 Nucleotidyl transferase FY148_20675 PF01380 SIS domain FY148_20675 PF00571 CBS domain FY148_20685 PF16200 C-terminal region of band_7 FY148_20685 PF01145 SPFH domain / Band 7 family FY148_20690 PF00762 Ferrochelatase FY148_20695 PF00149 Calcineurin-like phosphoesterase FY148_20695 PF02872 5'-nucleotidase, C-terminal domain FY148_20705 PF03435 Saccharopine dehydrogenase NADP binding domain FY148_20705 PF16653 Saccharopine dehydrogenase C-terminal domain FY148_20710 PF00990 Diguanylate cyclase, GGDEF domain FY148_20715 PF01063 Amino-transferase class IV FY148_20720 PF01432 Peptidase family M3 FY148_20720 PF08439 Oligopeptidase F FY148_20725 PF00072 Response regulator receiver domain FY148_20725 PF00158 Sigma-54 interaction domain FY148_20725 PF02954 Bacterial regulatory protein, Fis family FY148_20730 PF05951 Bacterial protein of unknown function (DUF882) FY148_20735 PF00224 Pyruvate kinase, barrel domain FY148_20735 PF02887 Pyruvate kinase, alpha/beta domain FY148_20755 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY148_20765 PF00444 Ribosomal protein L36 FY148_20770 PF02222 ATP-grasp domain FY148_20770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY148_20775 PF00731 AIR carboxylase FY148_20805 PF00459 Inositol monophosphatase family FY148_20815 PF00691 OmpA family FY148_20815 PF01389 OmpA-like transmembrane domain FY148_20820 PF00890 FAD binding domain FY148_20825 PF00005 ABC transporter FY148_20825 PF00664 ABC transporter transmembrane region FY148_20830 PF01197 Ribosomal protein L31 FY148_20850 PF00274 Fructose-bisphosphate aldolase class-I FY148_20855 PF00162 Phosphoglycerate kinase FY148_20860 PF00999 Sodium/hydrogen exchanger family FY148_20860 PF03471 Transporter associated domain FY148_20870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY148_20870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY148_20875 PF02779 Transketolase, pyrimidine binding domain FY148_20875 PF00456 Transketolase, thiamine diphosphate binding domain FY148_20875 PF02780 Transketolase, C-terminal domain FY148_20895 PF03471 Transporter associated domain FY148_20895 PF01595 Cyclin M transmembrane N-terminal domain FY148_20895 PF00571 CBS domain FY148_20905 PF13277 YmdB-like protein FY148_20920 PF01709 Transcriptional regulator FY148_20925 PF00296 Luciferase-like monooxygenase FY148_20930 PF00672 HAMP domain FY148_20930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_20935 PF02075 Crossover junction endodeoxyribonuclease RuvC FY148_20940 PF01330 RuvA N terminal domain FY148_20940 PF07499 RuvA, C-terminal domain FY148_20945 PF17864 RuvB AAA lid domain FY148_20945 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY148_20945 PF05491 RuvB C-terminal winged helix domain FY148_20960 PF00293 NUDIX domain FY148_20965 PF00293 NUDIX domain FY148_20970 PF03061 Thioesterase superfamily FY148_20975 PF01618 MotA/TolQ/ExbB proton channel family FY148_20980 PF02472 Biopolymer transport protein ExbD/TolR FY148_20990 PF07676 WD40-like Beta Propeller Repeat FY148_20990 PF04052 TolB amino-terminal domain FY148_20995 PF00691 OmpA family FY148_21005 PF01171 PP-loop family FY148_21010 PF01434 Peptidase family M41 FY148_21010 PF00004 ATPase family associated with various cellular activities (AAA) FY148_21010 PF06480 FtsH Extracellular FY148_21010 PF17862 AAA+ lid domain FY148_21015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY148_21015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY148_21015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY148_21015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY148_21020 PF13505 Outer membrane protein beta-barrel domain FY148_21030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY148_21030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_21030 PF01842 ACT domain FY148_21070 PF00085 Thioredoxin FY148_21080 PF03966 Trm112p-like protein FY148_21085 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY148_21085 PF07678 A-macroglobulin TED domain FY148_21085 PF07703 Alpha-2-macroglobulin bait region domain FY148_21085 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY148_21085 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY148_21085 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY148_21085 PF00207 Alpha-2-macroglobulin family FY148_21085 PF17962 Bacterial macroglobulin domain 6 FY148_21085 PF01835 MG2 domain FY148_21090 PF06832 Penicillin-Binding Protein C-terminus Family FY148_21090 PF00912 Transglycosylase FY148_21090 PF00905 Penicillin binding protein transpeptidase domain FY148_21100 PF01546 Peptidase family M20/M25/M40 FY148_21100 PF07687 Peptidase dimerisation domain FY148_21105 PF07943 Penicillin-binding protein 5, C-terminal domain FY148_21105 PF00768 D-alanyl-D-alanine carboxypeptidase FY148_21110 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY148_21110 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY148_21115 PF01206 Sulfurtransferase TusA FY148_21115 PF00581 Rhodanese-like domain FY148_21120 PF03734 L,D-transpeptidase catalytic domain FY148_21125 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY148_21130 PF02899 Phage integrase, N-terminal SAM-like domain FY148_21130 PF00589 Phage integrase family FY148_21140 PF01202 Shikimate kinase FY148_21145 PF01761 3-dehydroquinate synthase FY148_21155 PF01722 BolA-like protein FY148_21160 PF00226 DnaJ domain FY148_21165 PF07728 AAA domain (dynein-related subfamily) FY148_21165 PF12556 Cobaltochelatase CobS subunit N terminal FY148_21165 PF08406 CbbQ/NirQ/NorQ C-terminal FY148_21170 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY148_21170 PF06213 Cobalamin biosynthesis protein CobT FY148_21185 PF02592 Putative vitamin uptake transporter FY148_21190 PF00830 Ribosomal L28 family FY148_21210 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY148_21210 PF00753 Metallo-beta-lactamase superfamily FY148_21215 PF01209 ubiE/COQ5 methyltransferase family FY148_21220 PF00155 Aminotransferase class I and II FY148_21225 PF02153 Prephenate dehydrogenase FY148_21235 PF04752 ChaC-like protein FY148_21255 PF00005 ABC transporter FY148_21265 PF00156 Phosphoribosyl transferase domain FY148_21270 PF00072 Response regulator receiver domain FY148_21280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY148_21280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY148_21290 PF14698 Argininosuccinate lyase C-terminal FY148_21290 PF00206 Lyase FY148_21295 PF08534 Redoxin FY148_21305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY148_21305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY148_21310 PF01012 Electron transfer flavoprotein domain FY148_21310 PF00766 Electron transfer flavoprotein FAD-binding domain FY148_21315 PF01012 Electron transfer flavoprotein domain FY148_21325 PF01923 Cobalamin adenosyltransferase FY148_21335 PF00106 short chain dehydrogenase FY148_21345 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY148_21350 PF02805 Metal binding domain of Ada FY148_21350 PF00730 HhH-GPD superfamily base excision DNA repair protein FY148_21350 PF12833 Helix-turn-helix domain FY148_21350 PF06029 AlkA N-terminal domain FY148_21355 PF06114 IrrE N-terminal-like domain FY148_21355 PF01381 Helix-turn-helix FY148_21355 PF09856 Predicted transcriptional regulator (DUF2083) FY148_21360 PF01039 Carboxyl transferase domain FY148_21365 PF02798 Glutathione S-transferase, N-terminal domain FY148_21380 PF02785 Biotin carboxylase C-terminal domain FY148_21380 PF18140 Propionyl-coenzyme A carboxylase BT domain FY148_21380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_21380 PF00364 Biotin-requiring enzyme FY148_21380 PF00289 Biotin carboxylase, N-terminal domain FY148_21385 PF02310 B12 binding domain FY148_21385 PF01642 Methylmalonyl-CoA mutase FY148_21395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY148_21395 PF01266 FAD dependent oxidoreductase FY148_21405 PF13407 Periplasmic binding protein domain FY148_21410 PF02653 Branched-chain amino acid transport system / permease component FY148_21415 PF00005 ABC transporter FY148_21420 PF08267 Cobalamin-independent synthase, N-terminal domain FY148_21420 PF01717 Cobalamin-independent synthase, Catalytic domain FY148_21430 PF01381 Helix-turn-helix FY148_21445 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY148_21470 PF00480 ROK family FY148_21470 PF01047 MarR family FY148_21480 PF00528 Binding-protein-dependent transport system inner membrane component FY148_21485 PF00528 Binding-protein-dependent transport system inner membrane component FY148_21490 PF03459 TOBE domain FY148_21490 PF00005 ABC transporter FY148_21490 PF17912 MalK OB fold domain FY148_21495 PF03009 Glycerophosphoryl diester phosphodiesterase family FY148_21505 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY148_21505 PF00722 Glycosyl hydrolases family 16 FY148_21510 PF01272 Transcription elongation factor, GreA/GreB, C-term FY148_21510 PF03449 Transcription elongation factor, N-terminal FY148_21525 PF00534 Glycosyl transferases group 1 FY148_21525 PF13439 Glycosyltransferase Family 4 FY148_21530 PF00534 Glycosyl transferases group 1 FY148_21530 PF13439 Glycosyltransferase Family 4 FY148_21550 PF02706 Chain length determinant protein FY148_21550 PF13807 G-rich domain on putative tyrosine kinase FY148_21550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY148_21560 PF01757 Acyltransferase family FY148_21575 PF01943 Polysaccharide biosynthesis protein FY148_21635 PF01757 Acyltransferase family FY148_21640 PF00892 EamA-like transporter family FY148_21645 PF07517 SecA DEAD-like domain FY148_21645 PF01043 SecA preprotein cross-linking domain FY148_21645 PF07516 SecA Wing and Scaffold domain FY148_21645 PF02810 SEC-C motif FY148_21655 PF01960 ArgJ family FY148_21660 PF00583 Acetyltransferase (GNAT) family FY148_21660 PF13508 Acetyltransferase (GNAT) domain FY148_21665 PF00293 NUDIX domain FY148_21680 PF08241 Methyltransferase domain FY148_21690 PF00462 Glutaredoxin FY148_21695 PF00795 Carbon-nitrogen hydrolase FY148_21705 PF08241 Methyltransferase domain FY148_21720 PF00378 Enoyl-CoA hydratase/isomerase FY148_21730 PF00528 Binding-protein-dependent transport system inner membrane component FY148_21735 PF00528 Binding-protein-dependent transport system inner membrane component FY148_21740 PF00005 ABC transporter FY148_21745 PF08713 DNA alkylation repair enzyme FY148_21750 PF00171 Aldehyde dehydrogenase family FY148_21760 PF00563 EAL domain FY148_21760 PF00990 Diguanylate cyclase, GGDEF domain FY148_21760 PF08447 PAS fold FY148_21760 PF08448 PAS fold FY148_21770 PF00561 alpha/beta hydrolase fold FY148_21780 PF05336 L-rhamnose mutarotase FY148_21785 PF02653 Branched-chain amino acid transport system / permease component FY148_21790 PF02653 Branched-chain amino acid transport system / permease component FY148_21795 PF00005 ABC transporter FY148_21800 PF13407 Periplasmic binding protein domain FY148_21805 PF00455 DeoR C terminal sensor domain FY148_21805 PF08220 DeoR-like helix-turn-helix domain FY148_21810 PF00596 Class II Aldolase and Adducin N-terminal domain FY148_21815 PF01261 Xylose isomerase-like TIM barrel FY148_21820 PF02548 Ketopantoate hydroxymethyltransferase FY148_21825 PF02569 Pantoate-beta-alanine ligase FY148_21835 PF00682 HMGL-like FY148_21840 PF00364 Biotin-requiring enzyme FY148_21840 PF00289 Biotin carboxylase, N-terminal domain FY148_21840 PF02785 Biotin carboxylase C-terminal domain FY148_21840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_21845 PF01039 Carboxyl transferase domain FY148_21850 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_21850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_21850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_21855 PF01037 Lrp/AsnC ligand binding domain FY148_21860 PF02803 Thiolase, C-terminal domain FY148_21860 PF00108 Thiolase, N-terminal domain FY148_21865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_21865 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_21865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_21870 PF00676 Dehydrogenase E1 component FY148_21870 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY148_21875 PF02779 Transketolase, pyrimidine binding domain FY148_21875 PF02780 Transketolase, C-terminal domain FY148_21880 PF02817 e3 binding domain FY148_21880 PF00364 Biotin-requiring enzyme FY148_21880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY148_21885 PF01676 Metalloenzyme superfamily FY148_21885 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY148_21895 PF04143 Sulphur transport FY148_21905 PF04273 Putative phosphatase (DUF442) FY148_21905 PF00753 Metallo-beta-lactamase superfamily FY148_21915 PF00106 short chain dehydrogenase FY148_21920 PF00561 alpha/beta hydrolase fold FY148_21930 PF00392 Bacterial regulatory proteins, gntR family FY148_21930 PF07729 FCD domain FY148_21940 PF00528 Binding-protein-dependent transport system inner membrane component FY148_21945 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_21945 PF00528 Binding-protein-dependent transport system inner membrane component FY148_21950 PF00005 ABC transporter FY148_21950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_21955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_21955 PF00005 ABC transporter FY148_21960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_21970 PF13378 Enolase C-terminal domain-like FY148_21970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_21975 PF00106 short chain dehydrogenase FY148_21980 PF01638 HxlR-like helix-turn-helix FY148_21990 PF00296 Luciferase-like monooxygenase FY148_21995 PF00296 Luciferase-like monooxygenase FY148_22005 PF05368 NmrA-like family FY148_22010 PF00296 Luciferase-like monooxygenase FY148_22015 PF01546 Peptidase family M20/M25/M40 FY148_22015 PF07687 Peptidase dimerisation domain FY148_22020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_22030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_22035 PF00296 Luciferase-like monooxygenase FY148_22040 PF03466 LysR substrate binding domain FY148_22040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_22050 PF00248 Aldo/keto reductase family FY148_22055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_22055 PF00005 ABC transporter FY148_22060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_22060 PF00005 ABC transporter FY148_22065 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22070 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_22085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_22085 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_22085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_22090 PF00296 Luciferase-like monooxygenase FY148_22100 PF00581 Rhodanese-like domain FY148_22115 PF00296 Luciferase-like monooxygenase FY148_22120 PF01613 Flavin reductase like domain FY148_22130 PF02082 Transcriptional regulator FY148_22135 PF00296 Luciferase-like monooxygenase FY148_22140 PF00296 Luciferase-like monooxygenase FY148_22145 PF07687 Peptidase dimerisation domain FY148_22145 PF01546 Peptidase family M20/M25/M40 FY148_22155 PF00005 ABC transporter FY148_22160 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_22170 PF03466 LysR substrate binding domain FY148_22170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_22180 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_22180 PF04324 BFD-like [2Fe-2S] binding domain FY148_22185 PF01266 FAD dependent oxidoreductase FY148_22190 PF01266 FAD dependent oxidoreductase FY148_22195 PF01037 Lrp/AsnC ligand binding domain FY148_22200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_22200 PF00005 ABC transporter FY148_22205 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_22205 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22210 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_22225 PF00202 Aminotransferase class-III FY148_22240 PF01266 FAD dependent oxidoreductase FY148_22245 PF00171 Aldehyde dehydrogenase family FY148_22250 PF00180 Isocitrate/isopropylmalate dehydrogenase FY148_22255 PF00171 Aldehyde dehydrogenase family FY148_22265 PF01968 Hydantoinase/oxoprolinase FY148_22265 PF05378 Hydantoinase/oxoprolinase N-terminal region FY148_22280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_22285 PF07687 Peptidase dimerisation domain FY148_22285 PF01546 Peptidase family M20/M25/M40 FY148_22300 PF01032 FecCD transport family FY148_22305 PF00005 ABC transporter FY148_22310 PF00127 Copper binding proteins, plastocyanin/azurin family FY148_22315 PF01209 ubiE/COQ5 methyltransferase family FY148_22330 PF01032 FecCD transport family FY148_22335 PF00005 ABC transporter FY148_22340 PF04542 Sigma-70 region 2 FY148_22340 PF12680 SnoaL-like domain FY148_22340 PF08281 Sigma-70, region 4 FY148_22360 PF00005 ABC transporter FY148_22360 PF00664 ABC transporter transmembrane region FY148_22365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_22365 PF00529 HlyD membrane-fusion protein of T1SS FY148_22375 PF00392 Bacterial regulatory proteins, gntR family FY148_22375 PF07729 FCD domain FY148_22380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_22380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_22385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_22385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_22390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_22390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_22400 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22405 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22410 PF08402 TOBE domain FY148_22410 PF00005 ABC transporter FY148_22415 PF00920 Dehydratase family FY148_22420 PF01370 NAD dependent epimerase/dehydratase family FY148_22425 PF03737 Aldolase/RraA FY148_22430 PF00196 Bacterial regulatory proteins, luxR family FY148_22430 PF00072 Response regulator receiver domain FY148_22435 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22440 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_22440 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22445 PF00005 ABC transporter FY148_22445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_22460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_22475 PF01112 Asparaginase FY148_22480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_22480 PF03466 LysR substrate binding domain FY148_22485 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22490 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_22490 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22495 PF00005 ABC transporter FY148_22495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_22505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_22510 PF01546 Peptidase family M20/M25/M40 FY148_22520 PF13407 Periplasmic binding protein domain FY148_22525 PF00005 ABC transporter FY148_22530 PF02653 Branched-chain amino acid transport system / permease component FY148_22535 PF07722 Peptidase C26 FY148_22540 PF03480 Bacterial extracellular solute-binding protein, family 7 FY148_22545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY148_22550 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY148_22565 PF01266 FAD dependent oxidoreductase FY148_22570 PF08447 PAS fold FY148_22570 PF13426 PAS domain FY148_22570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_22575 PF00296 Luciferase-like monooxygenase FY148_22580 PF03972 MmgE/PrpD family FY148_22585 PF00005 ABC transporter FY148_22590 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22595 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22600 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_22605 PF00390 Malic enzyme, N-terminal domain FY148_22605 PF03949 Malic enzyme, NAD binding domain FY148_22605 PF01515 Phosphate acetyl/butaryl transferase FY148_22610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_22610 PF03466 LysR substrate binding domain FY148_22615 PF01011 PQQ enzyme repeat FY148_22620 PF01050 Mannose-6-phosphate isomerase FY148_22620 PF00483 Nucleotidyl transferase FY148_22630 PF01547 Bacterial extracellular solute-binding protein FY148_22635 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22640 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22645 PF00005 ABC transporter FY148_22645 PF17912 MalK OB fold domain FY148_22655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_22655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_22660 PF06508 Queuosine biosynthesis protein QueC FY148_22665 PF01242 6-pyruvoyl tetrahydropterin synthase FY148_22670 PF04055 Radical SAM superfamily FY148_22675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_22675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_22685 PF03459 TOBE domain FY148_22685 PF00005 ABC transporter FY148_22685 PF17912 MalK OB fold domain FY148_22690 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22695 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22700 PF01547 Bacterial extracellular solute-binding protein FY148_22705 PF00356 Bacterial regulatory proteins, lacI family FY148_22720 PF02245 Methylpurine-DNA glycosylase (MPG) FY148_22740 PF17969 L,D-transpeptidase C-terminal domain FY148_22740 PF03734 L,D-transpeptidase catalytic domain FY148_22745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_22745 PF00672 HAMP domain FY148_22750 PF00202 Aminotransferase class-III FY148_22760 PF02397 Bacterial sugar transferase FY148_22765 PF02563 Polysaccharide biosynthesis/export protein FY148_22780 PF00529 HlyD membrane-fusion protein of T1SS FY148_22785 PF00664 ABC transporter transmembrane region FY148_22785 PF00005 ABC transporter FY148_22800 PF00196 Bacterial regulatory proteins, luxR family FY148_22800 PF00072 Response regulator receiver domain FY148_22810 PF01370 NAD dependent epimerase/dehydratase family FY148_22815 PF16363 GDP-mannose 4,6 dehydratase FY148_22845 PF07238 PilZ domain FY148_22845 PF03552 Cellulose synthase FY148_22845 PF00535 Glycosyl transferase family 2 FY148_22855 PF01270 Glycosyl hydrolases family 8 FY148_22865 PF01546 Peptidase family M20/M25/M40 FY148_22865 PF07687 Peptidase dimerisation domain FY148_22880 PF00202 Aminotransferase class-III FY148_22885 PF00375 Sodium:dicarboxylate symporter family FY148_22890 PF02743 Cache domain FY148_22890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_22890 PF00512 His Kinase A (phospho-acceptor) domain FY148_22895 PF02954 Bacterial regulatory protein, Fis family FY148_22895 PF00072 Response regulator receiver domain FY148_22895 PF00158 Sigma-54 interaction domain FY148_22910 PF01266 FAD dependent oxidoreductase FY148_22915 PF01168 Alanine racemase, N-terminal domain FY148_22915 PF00842 Alanine racemase, C-terminal domain FY148_22920 PF01037 Lrp/AsnC ligand binding domain FY148_22925 PF08543 Phosphomethylpyrimidine kinase FY148_22930 PF02581 Thiamine monophosphate synthase FY148_22935 PF02110 Hydroxyethylthiazole kinase family FY148_22940 PF09084 NMT1/THI5 like FY148_22945 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22955 PF01055 Glycosyl hydrolases family 31 FY148_22960 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22965 PF00528 Binding-protein-dependent transport system inner membrane component FY148_22970 PF01547 Bacterial extracellular solute-binding protein FY148_22975 PF00005 ABC transporter FY148_22975 PF08402 TOBE domain FY148_22980 PF00392 Bacterial regulatory proteins, gntR family FY148_22980 PF07702 UTRA domain FY148_22985 PF00296 Luciferase-like monooxygenase FY148_22990 PF00248 Aldo/keto reductase family FY148_22995 PF01613 Flavin reductase like domain FY148_23010 PF00873 AcrB/AcrD/AcrF family FY148_23020 PF02563 Polysaccharide biosynthesis/export protein FY148_23025 PF00534 Glycosyl transferases group 1 FY148_23025 PF13439 Glycosyltransferase Family 4 FY148_23030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_23035 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23040 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_23040 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23045 PF01979 Amidohydrolase family FY148_23060 PF03841 L-seryl-tRNA selenium transferase FY148_23065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_23065 PF00005 ABC transporter FY148_23070 PF00043 Glutathione S-transferase, C-terminal domain FY148_23070 PF02798 Glutathione S-transferase, N-terminal domain FY148_23085 PF00296 Luciferase-like monooxygenase FY148_23090 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY148_23090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY148_23095 PF03480 Bacterial extracellular solute-binding protein, family 7 FY148_23105 PF00171 Aldehyde dehydrogenase family FY148_23115 PF03786 D-mannonate dehydratase (UxuA) FY148_23120 PF08240 Alcohol dehydrogenase GroES-like domain FY148_23120 PF00107 Zinc-binding dehydrogenase FY148_23125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY148_23135 PF03480 Bacterial extracellular solute-binding protein, family 7 FY148_23140 PF07729 FCD domain FY148_23140 PF00392 Bacterial regulatory proteins, gntR family FY148_23145 PF13419 Haloacid dehalogenase-like hydrolase FY148_23150 PF05209 Septum formation inhibitor MinC, N-terminal domain FY148_23150 PF03775 Septum formation inhibitor MinC, C-terminal domain FY148_23155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY148_23160 PF03776 Septum formation topological specificity factor MinE FY148_23165 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_23175 PF08447 PAS fold FY148_23175 PF00990 Diguanylate cyclase, GGDEF domain FY148_23175 PF00563 EAL domain FY148_23175 PF08448 PAS fold FY148_23180 PF01425 Amidase FY148_23190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_23200 PF01547 Bacterial extracellular solute-binding protein FY148_23205 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23210 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23215 PF00005 ABC transporter FY148_23215 PF17912 MalK OB fold domain FY148_23215 PF03459 TOBE domain FY148_23225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_23225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_23235 PF13660 Domain of unknown function (DUF4147) FY148_23235 PF05161 MOFRL family FY148_23255 PF02811 PHP domain FY148_23255 PF14579 Helix-hairpin-helix motif FY148_23255 PF01336 OB-fold nucleic acid binding domain FY148_23255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY148_23255 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY148_23260 PF01209 ubiE/COQ5 methyltransferase family FY148_23270 PF07690 Major Facilitator Superfamily FY148_23275 PF00392 Bacterial regulatory proteins, gntR family FY148_23275 PF07729 FCD domain FY148_23280 PF02653 Branched-chain amino acid transport system / permease component FY148_23285 PF02653 Branched-chain amino acid transport system / permease component FY148_23290 PF00005 ABC transporter FY148_23295 PF13407 Periplasmic binding protein domain FY148_23300 PF00920 Dehydratase family FY148_23310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_23315 PF12833 Helix-turn-helix domain FY148_23325 PF00266 Aminotransferase class-V FY148_23330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_23330 PF00005 ABC transporter FY148_23335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_23335 PF00005 ABC transporter FY148_23340 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23345 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_23355 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY148_23355 PF01580 FtsK/SpoIIIE family FY148_23355 PF17854 FtsK alpha domain FY148_23355 PF09397 Ftsk gamma domain FY148_23360 PF02615 Malate/L-lactate dehydrogenase FY148_23365 PF00563 EAL domain FY148_23365 PF00990 Diguanylate cyclase, GGDEF domain FY148_23365 PF08447 PAS fold FY148_23365 PF08448 PAS fold FY148_23375 PF05899 Protein of unknown function (DUF861) FY148_23375 PF07883 Cupin domain FY148_23380 PF00990 Diguanylate cyclase, GGDEF domain FY148_23380 PF17151 Periplasmic sensor domain FY148_23385 PF00529 HlyD membrane-fusion protein of T1SS FY148_23385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_23390 PF00873 AcrB/AcrD/AcrF family FY148_23395 PF00440 Bacterial regulatory proteins, tetR family FY148_23395 PF08361 MAATS-type transcriptional repressor, C-terminal region FY148_23400 PF00005 ABC transporter FY148_23405 PF02653 Branched-chain amino acid transport system / permease component FY148_23410 PF13407 Periplasmic binding protein domain FY148_23415 PF03466 LysR substrate binding domain FY148_23415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_23420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY148_23420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY148_23440 PF03922 OmpW family FY148_23450 PF00005 ABC transporter FY148_23450 PF08402 TOBE domain FY148_23455 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23460 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23465 PF13416 Bacterial extracellular solute-binding protein FY148_23470 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY148_23470 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY148_23485 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY148_23485 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY148_23490 PF00005 ABC transporter FY148_23495 PF00950 ABC 3 transport family FY148_23500 PF01297 Zinc-uptake complex component A periplasmic FY148_23505 PF00583 Acetyltransferase (GNAT) family FY148_23520 PF01053 Cys/Met metabolism PLP-dependent enzyme FY148_23525 PF01547 Bacterial extracellular solute-binding protein FY148_23530 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23535 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23540 PF17912 MalK OB fold domain FY148_23540 PF00005 ABC transporter FY148_23545 PF00005 ABC transporter FY148_23545 PF08402 TOBE domain FY148_23550 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23555 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23560 PF08013 Tagatose 6 phosphate kinase FY148_23565 PF00294 pfkB family carbohydrate kinase FY148_23580 PF16912 Glucose dehydrogenase C-terminus FY148_23580 PF08240 Alcohol dehydrogenase GroES-like domain FY148_23585 PF00356 Bacterial regulatory proteins, lacI family FY148_23590 PF07690 Major Facilitator Superfamily FY148_23595 PF02311 AraC-like ligand binding domain FY148_23595 PF12833 Helix-turn-helix domain FY148_23605 PF13416 Bacterial extracellular solute-binding protein FY148_23610 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23615 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23620 PF00005 ABC transporter FY148_23620 PF17912 MalK OB fold domain FY148_23625 PF00248 Aldo/keto reductase family FY148_23640 PF07729 FCD domain FY148_23640 PF00392 Bacterial regulatory proteins, gntR family FY148_23645 PF01370 NAD dependent epimerase/dehydratase family FY148_23650 PF04962 KduI/IolB family FY148_23660 PF00701 Dihydrodipicolinate synthetase family FY148_23665 PF13378 Enolase C-terminal domain-like FY148_23665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_23670 PF04909 Amidohydrolase FY148_23675 PF02311 AraC-like ligand binding domain FY148_23675 PF12833 Helix-turn-helix domain FY148_23680 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23685 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23690 PF08402 TOBE domain FY148_23690 PF00005 ABC transporter FY148_23700 PF00295 Glycosyl hydrolases family 28 FY148_23705 PF07470 Glycosyl Hydrolase Family 88 FY148_23710 PF00550 Phosphopantetheine attachment site FY148_23730 PF01165 Ribosomal protein S21 FY148_23740 PF00313 'Cold-shock' DNA-binding domain FY148_23745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_23745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_23760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_23760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_23765 PF00440 Bacterial regulatory proteins, tetR family FY148_23765 PF17938 Tetracyclin repressor-like, C-terminal domain FY148_23770 PF13416 Bacterial extracellular solute-binding protein FY148_23775 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23780 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23785 PF00005 ABC transporter FY148_23785 PF17912 MalK OB fold domain FY148_23785 PF03459 TOBE domain FY148_23790 PF01261 Xylose isomerase-like TIM barrel FY148_23795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY148_23795 PF01842 ACT domain FY148_23795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY148_23805 PF00356 Bacterial regulatory proteins, lacI family FY148_23820 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY148_23825 PF17912 MalK OB fold domain FY148_23825 PF00005 ABC transporter FY148_23835 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23840 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23845 PF00005 ABC transporter FY148_23850 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23855 PF09084 NMT1/THI5 like FY148_23860 PF00296 Luciferase-like monooxygenase FY148_23870 PF00005 ABC transporter FY148_23870 PF17912 MalK OB fold domain FY148_23875 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23880 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23885 PF13416 Bacterial extracellular solute-binding protein FY148_23895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_23895 PF08447 PAS fold FY148_23895 PF13426 PAS domain FY148_23920 PF08402 TOBE domain FY148_23920 PF00005 ABC transporter FY148_23930 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23935 PF00528 Binding-protein-dependent transport system inner membrane component FY148_23940 PF01177 Asp/Glu/Hydantoin racemase FY148_23980 PF03466 LysR substrate binding domain FY148_23980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_23985 PF00144 Beta-lactamase FY148_23995 PF00860 Permease family FY148_24005 PF07690 Major Facilitator Superfamily FY148_24010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_24010 PF00512 His Kinase A (phospho-acceptor) domain FY148_24010 PF00989 PAS fold FY148_24010 PF16736 Single Cache-like FY148_24015 PF00072 Response regulator receiver domain FY148_24015 PF00486 Transcriptional regulatory protein, C terminal FY148_24020 PF00529 HlyD membrane-fusion protein of T1SS FY148_24020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_24025 PF00873 AcrB/AcrD/AcrF family FY148_24030 PF13460 NAD(P)H-binding FY148_24040 PF01494 FAD binding domain FY148_24045 PF02308 MgtC family FY148_24055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY148_24060 PF00873 AcrB/AcrD/AcrF family FY148_24065 PF13520 Amino acid permease FY148_24070 PF13520 Amino acid permease FY148_24085 PF01594 AI-2E family transporter FY148_24110 PF01037 Lrp/AsnC ligand binding domain FY148_24135 PF00501 AMP-binding enzyme FY148_24135 PF13193 AMP-binding enzyme C-terminal domain FY148_24145 PF09339 IclR helix-turn-helix domain FY148_24145 PF01614 Bacterial transcriptional regulator FY148_24155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY148_24155 PF03480 Bacterial extracellular solute-binding protein, family 7 FY148_24160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY148_24160 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY148_24165 PF04199 Putative cyclase FY148_24170 PF01494 FAD binding domain FY148_24175 PF00190 Cupin FY148_24185 PF00196 Bacterial regulatory proteins, luxR family FY148_24185 PF00072 Response regulator receiver domain FY148_24190 PF00196 Bacterial regulatory proteins, luxR family FY148_24190 PF00072 Response regulator receiver domain FY148_24195 PF00072 Response regulator receiver domain FY148_24195 PF13426 PAS domain FY148_24195 PF00512 His Kinase A (phospho-acceptor) domain FY148_24195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_24195 PF08448 PAS fold FY148_24200 PF00384 Molybdopterin oxidoreductase FY148_24205 PF00210 Ferritin-like domain FY148_24210 PF00561 alpha/beta hydrolase fold FY148_24220 PF06441 Epoxide hydrolase N terminus FY148_24225 PF00171 Aldehyde dehydrogenase family FY148_24230 PF02566 OsmC-like protein FY148_24235 PF00512 His Kinase A (phospho-acceptor) domain FY148_24235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_24235 PF00672 HAMP domain FY148_24240 PF00486 Transcriptional regulatory protein, C terminal FY148_24240 PF00072 Response regulator receiver domain FY148_24245 PF00561 alpha/beta hydrolase fold FY148_24255 PF00578 AhpC/TSA family FY148_24255 PF02683 Cytochrome C biogenesis protein transmembrane region FY148_24255 PF17991 Thioredoxin like C-terminal domain FY148_24265 PF07690 Major Facilitator Superfamily FY148_24270 PF00990 Diguanylate cyclase, GGDEF domain FY148_24280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_24280 PF00005 ABC transporter FY148_24290 PF00106 short chain dehydrogenase FY148_24290 PF00300 Histidine phosphatase superfamily (branch 1) FY148_24295 PF01266 FAD dependent oxidoreductase FY148_24300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_24305 PF00528 Binding-protein-dependent transport system inner membrane component FY148_24310 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_24310 PF00528 Binding-protein-dependent transport system inner membrane component FY148_24315 PF01266 FAD dependent oxidoreductase FY148_24325 PF13649 Methyltransferase domain FY148_24330 PF00999 Sodium/hydrogen exchanger family FY148_24335 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY148_24340 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY148_24345 PF00459 Inositol monophosphatase family FY148_24360 PF01546 Peptidase family M20/M25/M40 FY148_24365 PF08220 DeoR-like helix-turn-helix domain FY148_24365 PF00455 DeoR C terminal sensor domain FY148_24370 PF00005 ABC transporter FY148_24370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_24375 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_24375 PF00528 Binding-protein-dependent transport system inner membrane component FY148_24380 PF00528 Binding-protein-dependent transport system inner membrane component FY148_24385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_24390 PF00465 Iron-containing alcohol dehydrogenase FY148_24395 PF00795 Carbon-nitrogen hydrolase FY148_24400 PF00005 ABC transporter FY148_24400 PF09383 NIL domain FY148_24405 PF00005 ABC transporter FY148_24405 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_24410 PF02653 Branched-chain amino acid transport system / permease component FY148_24415 PF02653 Branched-chain amino acid transport system / permease component FY148_24420 PF13458 Periplasmic binding protein FY148_24445 PF13614 AAA domain FY148_24445 PF00376 MerR family regulatory protein FY148_24450 PF07506 RepB plasmid partitioning protein FY148_24450 PF02195 ParB-like nuclease domain FY148_24455 PF03428 Replication protein C N-terminal domain FY148_24455 PF11800 Replication protein C C-terminal region FY148_24465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_24465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_24470 PF00005 ABC transporter FY148_24475 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_24480 PF00356 Bacterial regulatory proteins, lacI family FY148_24515 PF00487 Fatty acid desaturase FY148_24525 PF00313 'Cold-shock' DNA-binding domain FY148_24565 PF01043 SecA preprotein cross-linking domain FY148_24565 PF07517 SecA DEAD-like domain FY148_24565 PF02810 SEC-C motif FY148_24565 PF07516 SecA Wing and Scaffold domain FY148_24605 PF13087 AAA domain FY148_24605 PF13091 PLD-like domain FY148_24640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_24640 PF00512 His Kinase A (phospho-acceptor) domain FY148_24640 PF00989 PAS fold FY148_24645 PF00664 ABC transporter transmembrane region FY148_24645 PF00005 ABC transporter FY148_24655 PF01022 Bacterial regulatory protein, arsR family FY148_24685 PF12833 Helix-turn-helix domain FY148_24685 PF01965 DJ-1/PfpI family FY148_24690 PF07690 Major Facilitator Superfamily FY148_24695 PF07690 Major Facilitator Superfamily FY148_24700 PF01047 MarR family FY148_24715 PF07690 Major Facilitator Superfamily FY148_24745 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY148_24750 PF00561 alpha/beta hydrolase fold FY148_24760 PF04752 ChaC-like protein FY148_24765 PF03466 LysR substrate binding domain FY148_24765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_24780 PF00011 Hsp20/alpha crystallin family FY148_24825 PF04956 TrbC/VIRB2 family FY148_24830 PF05101 Type IV secretory pathway, VirB3-like protein FY148_24835 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY148_24840 PF07996 Type IV secretion system proteins FY148_24850 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY148_24860 PF04335 VirB8 protein FY148_24865 PF03524 Conjugal transfer protein FY148_24870 PF03743 Bacterial conjugation TrbI-like protein FY148_24875 PF00437 Type II/IV secretion system protein FY148_24895 PF03230 Antirestriction protein FY148_24975 PF05406 WGR domain FY148_24990 PF02534 Type IV secretory system Conjugative DNA transfer FY148_25005 PF17841 BID domain of Bartonella effector protein (Bep) FY148_25005 PF03389 MobA/MobL family FY148_25005 PF01443 Viral (Superfamily 1) RNA helicase FY148_25015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_25015 PF03466 LysR substrate binding domain FY148_25040 PF00196 Bacterial regulatory proteins, luxR family FY148_25040 PF03472 Autoinducer binding domain FY148_25045 PF00765 Autoinducer synthase FY148_25055 PF00072 Response regulator receiver domain FY148_25055 PF00486 Transcriptional regulatory protein, C terminal FY148_25080 PF00795 Carbon-nitrogen hydrolase FY148_25090 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY148_25095 PF00005 ABC transporter FY148_25095 PF08402 TOBE domain FY148_25100 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25105 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25120 PF13635 Domain of unknown function (DUF4143) FY148_25120 PF13173 AAA domain FY148_25125 PF00682 HMGL-like FY148_25125 PF02785 Biotin carboxylase C-terminal domain FY148_25125 PF00289 Biotin carboxylase, N-terminal domain FY148_25125 PF00364 Biotin-requiring enzyme FY148_25125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY148_25125 PF02436 Conserved carboxylase domain FY148_25130 PF14552 Tautomerase enzyme FY148_25135 PF03328 HpcH/HpaI aldolase/citrate lyase family FY148_25140 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY148_25150 PF09339 IclR helix-turn-helix domain FY148_25150 PF01614 Bacterial transcriptional regulator FY148_25160 PF00005 ABC transporter FY148_25165 PF00005 ABC transporter FY148_25175 PF02653 Branched-chain amino acid transport system / permease component FY148_25175 PF11862 Domain of unknown function (DUF3382) FY148_25195 PF08502 LeuA allosteric (dimerisation) domain FY148_25195 PF00682 HMGL-like FY148_25200 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25205 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25210 PF01047 MarR family FY148_25210 PF00480 ROK family FY148_25215 PF00128 Alpha amylase, catalytic domain FY148_25220 PF01546 Peptidase family M20/M25/M40 FY148_25220 PF07687 Peptidase dimerisation domain FY148_25225 PF01261 Xylose isomerase-like TIM barrel FY148_25230 PF00005 ABC transporter FY148_25230 PF17912 MalK OB fold domain FY148_25240 PF00480 ROK family FY148_25245 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25250 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25255 PF01547 Bacterial extracellular solute-binding protein FY148_25260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY148_25260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY148_25275 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY148_25290 PF00005 ABC transporter FY148_25295 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25300 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25305 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY148_25310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_25310 PF00005 ABC transporter FY148_25315 PF00005 ABC transporter FY148_25315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_25320 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_25320 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25325 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_25335 PF03737 Aldolase/RraA FY148_25340 PF03466 LysR substrate binding domain FY148_25340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_25345 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY148_25350 PF07687 Peptidase dimerisation domain FY148_25350 PF01546 Peptidase family M20/M25/M40 FY148_25355 PF01156 Inosine-uridine preferring nucleoside hydrolase FY148_25370 PF00857 Isochorismatase family FY148_25385 PF02678 Pirin FY148_25385 PF17954 Quercetinase C-terminal cupin domain FY148_25390 PF03358 NADPH-dependent FMN reductase FY148_25395 PF00561 alpha/beta hydrolase fold FY148_25415 PF13533 Biotin-lipoyl like FY148_25420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_25420 PF03466 LysR substrate binding domain FY148_25425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY148_25430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_25430 PF03466 LysR substrate binding domain FY148_25445 PF00857 Isochorismatase family FY148_25450 PF03466 LysR substrate binding domain FY148_25450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_25460 PF03551 Transcriptional regulator PadR-like family FY148_25520 PF02653 Branched-chain amino acid transport system / permease component FY148_25525 PF00005 ABC transporter FY148_25530 PF00005 ABC transporter FY148_25530 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_25540 PF14525 AraC-binding-like domain FY148_25540 PF12833 Helix-turn-helix domain FY148_25600 PF07729 FCD domain FY148_25600 PF00392 Bacterial regulatory proteins, gntR family FY148_25605 PF00775 Dioxygenase FY148_25605 PF04444 Catechol dioxygenase N terminus FY148_25610 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY148_25615 PF03328 HpcH/HpaI aldolase/citrate lyase family FY148_25625 PF01571 Aminomethyltransferase folate-binding domain FY148_25630 PF02219 Methylenetetrahydrofolate reductase FY148_25635 PF00551 Formyl transferase FY148_25645 PF00107 Zinc-binding dehydrogenase FY148_25645 PF08240 Alcohol dehydrogenase GroES-like domain FY148_25655 PF02770 Acyl-CoA dehydrogenase, middle domain FY148_25655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY148_25655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY148_25655 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY148_25660 PF00378 Enoyl-CoA hydratase/isomerase FY148_25665 PF00501 AMP-binding enzyme FY148_25665 PF13193 AMP-binding enzyme C-terminal domain FY148_25670 PF00171 Aldehyde dehydrogenase family FY148_25675 PF07690 Major Facilitator Superfamily FY148_25690 PF00990 Diguanylate cyclase, GGDEF domain FY148_25690 PF17158 Membrane-associated sensor, integral membrane domain FY148_25710 PF12802 MarR family FY148_25720 PF13458 Periplasmic binding protein FY148_25725 PF02653 Branched-chain amino acid transport system / permease component FY148_25735 PF00005 ABC transporter FY148_25735 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_25740 PF00005 ABC transporter FY148_25750 PF00171 Aldehyde dehydrogenase family FY148_25755 PF07687 Peptidase dimerisation domain FY148_25755 PF01546 Peptidase family M20/M25/M40 FY148_25760 PF00202 Aminotransferase class-III FY148_25765 PF00171 Aldehyde dehydrogenase family FY148_25770 PF08450 SMP-30/Gluconolactonase/LRE-like region FY148_25775 PF01261 Xylose isomerase-like TIM barrel FY148_25780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY148_25780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY148_25800 PF01979 Amidohydrolase family FY148_25805 PF00480 ROK family FY148_25805 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY148_25810 PF02653 Branched-chain amino acid transport system / permease component FY148_25815 PF13407 Periplasmic binding protein domain FY148_25820 PF00005 ABC transporter FY148_25840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_25840 PF03466 LysR substrate binding domain FY148_25845 PF07690 Major Facilitator Superfamily FY148_25855 PF00135 Carboxylesterase family FY148_25865 PF00135 Carboxylesterase family FY148_25875 PF00005 ABC transporter FY148_25880 PF02653 Branched-chain amino acid transport system / permease component FY148_25885 PF00135 Carboxylesterase family FY148_25895 PF04303 PrpF protein FY148_25900 PF03737 Aldolase/RraA FY148_25905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY148_25910 PF02585 GlcNAc-PI de-N-acetylase FY148_25925 PF00005 ABC transporter FY148_25925 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY148_25930 PF00005 ABC transporter FY148_25935 PF13458 Periplasmic binding protein FY148_25945 PF03466 LysR substrate binding domain FY148_25945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY148_25950 PF09339 IclR helix-turn-helix domain FY148_25950 PF01614 Bacterial transcriptional regulator FY148_25960 PF13378 Enolase C-terminal domain-like FY148_25960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY148_25970 PF00005 ABC transporter FY148_25970 PF08402 TOBE domain FY148_25975 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25980 PF00528 Binding-protein-dependent transport system inner membrane component FY148_25990 PF07690 Major Facilitator Superfamily FY148_26025 PF03928 Haem-degrading FY148_26045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_26050 PF00528 Binding-protein-dependent transport system inner membrane component FY148_26055 PF00528 Binding-protein-dependent transport system inner membrane component FY148_26055 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_26060 PF00005 ABC transporter FY148_26060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_26070 PF00296 Luciferase-like monooxygenase FY148_26080 PF00528 Binding-protein-dependent transport system inner membrane component FY148_26085 PF00005 ABC transporter FY148_26090 PF05199 GMC oxidoreductase FY148_26090 PF00732 GMC oxidoreductase FY148_26095 PF00171 Aldehyde dehydrogenase family FY148_26110 PF07729 FCD domain FY148_26110 PF00392 Bacterial regulatory proteins, gntR family FY148_26115 PF04324 BFD-like [2Fe-2S] binding domain FY148_26115 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY148_26125 PF01266 FAD dependent oxidoreductase FY148_26135 PF01958 Domain of unknown function DUF108 FY148_26135 PF03447 Homoserine dehydrogenase, NAD binding domain FY148_26140 PF01042 Endoribonuclease L-PSP FY148_26145 PF01548 Transposase FY148_26145 PF02371 Transposase IS116/IS110/IS902 family FY148_26185 PF00857 Isochorismatase family FY148_26195 PF00440 Bacterial regulatory proteins, tetR family FY148_26200 PF00005 ABC transporter FY148_26205 PF01032 FecCD transport family FY148_26210 PF01032 FecCD transport family FY148_26220 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY148_26220 PF07732 Multicopper oxidase FY148_26220 PF07731 Multicopper oxidase FY148_26220 PF00394 Multicopper oxidase FY148_26225 PF00591 Glycosyl transferase family, a/b domain FY148_26225 PF02885 Glycosyl transferase family, helical bundle domain FY148_26230 PF07715 TonB-dependent Receptor Plug Domain FY148_26230 PF00593 TonB dependent receptor FY148_26265 PF03551 Transcriptional regulator PadR-like family FY148_26300 PF00394 Multicopper oxidase FY148_26300 PF07731 Multicopper oxidase FY148_26300 PF07732 Multicopper oxidase FY148_26320 PF01209 ubiE/COQ5 methyltransferase family FY148_26335 PF04079 Segregation and condensation complex subunit ScpB FY148_26345 PF00589 Phage integrase family FY148_26355 PF13614 AAA domain FY148_26360 PF02195 ParB-like nuclease domain FY148_26360 PF07506 RepB plasmid partitioning protein FY148_26365 PF03428 Replication protein C N-terminal domain FY148_26365 PF11800 Replication protein C C-terminal region FY148_26370 PF00239 Resolvase, N terminal domain FY148_26375 PF11972 HTH DNA binding domain FY148_26375 PF07756 Protein of unknown function (DUF1612) FY148_26395 PF02796 Helix-turn-helix domain of resolvase FY148_26395 PF00239 Resolvase, N terminal domain FY148_26400 PF07690 Major Facilitator Superfamily FY148_26410 PF08808 RES domain FY148_26450 PF00293 NUDIX domain FY148_26465 PF03543 Yersinia/Haemophilus virulence surface antigen FY148_26465 PF05860 haemagglutination activity domain FY148_26465 PF13332 Hemagglutinin repeat FY148_26465 PF13018 Extended Signal Peptide of Type V secretion system FY148_26465 PF02661 Fic/DOC family FY148_26490 PF02195 ParB-like nuclease domain FY148_26490 PF17762 HTH domain found in ParB protein FY148_26515 PF08274 PhnA Zinc-Ribbon FY148_26515 PF03831 PhnA domain FY148_26535 PF01810 LysE type translocator FY148_26550 PF05284 Protein of unknown function (DUF736) FY148_26560 PF13417 Glutathione S-transferase, N-terminal domain FY148_26590 PF00107 Zinc-binding dehydrogenase FY148_26590 PF08240 Alcohol dehydrogenase GroES-like domain FY148_26610 PF13407 Periplasmic binding protein domain FY148_26615 PF02653 Branched-chain amino acid transport system / permease component FY148_26620 PF00005 ABC transporter FY148_26635 PF01810 LysE type translocator FY148_26640 PF00216 Bacterial DNA-binding protein FY148_26660 PF02534 Type IV secretory system Conjugative DNA transfer FY148_26665 PF06412 Conjugal transfer protein TraD FY148_26670 PF07820 TraC-like protein FY148_26675 PF01443 Viral (Superfamily 1) RNA helicase FY148_26675 PF03389 MobA/MobL family FY148_26675 PF17841 BID domain of Bartonella effector protein (Bep) FY148_26680 PF10502 Signal peptidase, peptidase S26 FY148_26685 PF00795 Carbon-nitrogen hydrolase FY148_26690 PF06871 TraH_2 FY148_26695 PF09228 Prokaryotic Transcriptional repressor TraM FY148_26700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY148_26700 PF08447 PAS fold FY148_26700 PF13426 PAS domain FY148_26710 PF00196 Bacterial regulatory proteins, luxR family FY148_26710 PF03472 Autoinducer binding domain FY148_26715 PF00128 Alpha amylase, catalytic domain FY148_26720 PF02690 Na+/Pi-cotransporter FY148_26730 PF08220 DeoR-like helix-turn-helix domain FY148_26730 PF00455 DeoR C terminal sensor domain FY148_26735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_26740 PF00005 ABC transporter FY148_26740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_26745 PF00005 ABC transporter FY148_26745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_26750 PF00528 Binding-protein-dependent transport system inner membrane component FY148_26755 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_26755 PF00528 Binding-protein-dependent transport system inner membrane component FY148_26760 PF03009 Glycerophosphoryl diester phosphodiesterase family FY148_26765 PF00459 Inositol monophosphatase family FY148_26790 PF00067 Cytochrome P450 FY148_26795 PF00067 Cytochrome P450 FY148_26810 PF06903 VirK protein FY148_26845 PF00512 His Kinase A (phospho-acceptor) domain FY148_26845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY148_26850 PF01464 Transglycosylase SLT domain FY148_26855 PF04956 TrbC/VIRB2 family FY148_26860 PF05101 Type IV secretory pathway, VirB3-like protein FY148_26865 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY148_26875 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY148_26880 PF17413 Outer membrane lipoprotein virB7 FY148_26885 PF04335 VirB8 protein FY148_26890 PF03524 Conjugal transfer protein FY148_26895 PF03743 Bacterial conjugation TrbI-like protein FY148_26900 PF00437 Type II/IV secretion system protein FY148_26905 PF00072 Response regulator receiver domain FY148_26905 PF00486 Transcriptional regulatory protein, C terminal FY148_26910 PF07181 VirC2 protein FY148_26915 PF07015 VirC1 protein FY148_26920 PF07328 T-DNA border endonuclease VirD1 FY148_26925 PF03432 Relaxase/Mobilisation nuclease domain FY148_26935 PF02534 Type IV secretory system Conjugative DNA transfer FY148_26955 PF12189 Single-strand DNA-binding protein FY148_26960 PF07229 VirE2 FY148_26980 PF05717 IS66 Orf2 like protein FY148_26985 PF03472 Autoinducer binding domain FY148_26985 PF00196 Bacterial regulatory proteins, luxR family FY148_27000 PF00459 Inositol monophosphatase family FY148_27035 PF02027 RolB/RolC glucosidase family FY148_27040 PF01425 Amidase FY148_27045 PF01593 Flavin containing amine oxidoreductase FY148_27045 PF02027 RolB/RolC glucosidase family FY148_27055 PF02027 RolB/RolC glucosidase family FY148_27060 PF01380 SIS domain FY148_27065 PF00106 short chain dehydrogenase FY148_27065 PF00300 Histidine phosphatase superfamily (branch 1) FY148_27070 PF00557 Metallopeptidase family M24 FY148_27070 PF01321 Creatinase/Prolidase N-terminal domain FY148_27090 PF00528 Binding-protein-dependent transport system inner membrane component FY148_27095 PF00528 Binding-protein-dependent transport system inner membrane component FY148_27100 PF08402 TOBE domain FY148_27100 PF00005 ABC transporter FY148_27130 PF08402 TOBE domain FY148_27130 PF00005 ABC transporter FY148_27135 PF01321 Creatinase/Prolidase N-terminal domain FY148_27135 PF00557 Metallopeptidase family M24 FY148_27140 PF00294 pfkB family carbohydrate kinase FY148_27155 PF00106 short chain dehydrogenase FY148_27160 PF00920 Dehydratase family FY148_27165 PF00248 Aldo/keto reductase family FY148_27180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_27185 PF00528 Binding-protein-dependent transport system inner membrane component FY148_27185 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_27190 PF00528 Binding-protein-dependent transport system inner membrane component FY148_27195 PF00005 ABC transporter FY148_27195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_27200 PF00106 short chain dehydrogenase FY148_27200 PF00300 Histidine phosphatase superfamily (branch 1) FY148_27205 PF01266 FAD dependent oxidoreductase FY148_27210 PF01968 Hydantoinase/oxoprolinase FY148_27210 PF05378 Hydantoinase/oxoprolinase N-terminal region FY148_27225 PF00455 DeoR C terminal sensor domain FY148_27225 PF08220 DeoR-like helix-turn-helix domain FY148_27235 PF00528 Binding-protein-dependent transport system inner membrane component FY148_27240 PF12911 N-terminal TM domain of oligopeptide transport permease C FY148_27240 PF00528 Binding-protein-dependent transport system inner membrane component FY148_27245 PF00005 ABC transporter FY148_27245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY148_27250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY148_27260 PF03743 Bacterial conjugation TrbI-like protein FY148_27270 PF03524 Conjugal transfer protein FY148_27275 PF04335 VirB8 protein FY148_27280 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY148_27285 PF10907 Protein of unknown function (DUF2749) FY148_27295 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY148_27300 PF05101 Type IV secretory pathway, VirB3-like protein FY148_27305 PF04956 TrbC/VIRB2 family FY148_27310 PF00437 Type II/IV secretion system protein FY148_27315 PF00765 Autoinducer synthase FY148_27350 PF02534 Type IV secretory system Conjugative DNA transfer FY148_27365 PF01443 Viral (Superfamily 1) RNA helicase FY148_27365 PF03389 MobA/MobL family FY148_27365 PF17841 BID domain of Bartonella effector protein (Bep) FY148_27380 PF00224 Pyruvate kinase, barrel domain FY148_27380 PF02887 Pyruvate kinase, alpha/beta domain FY148_27390 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY148_27390 PF00391 PEP-utilising enzyme, mobile domain FY148_27390 PF02896 PEP-utilising enzyme, TIM barrel domain FY148_27415 PF17676 LD-carboxypeptidase C-terminal domain FY148_27415 PF02016 LD-carboxypeptidase N-terminal domain FY148_27425 PF13649 Methyltransferase domain FY148_27445 PF13603 Leucyl-tRNA synthetase, Domain 2 FY148_27445 PF00133 tRNA synthetases class I (I, L, M and V) FY148_27445 PF08264 Anticodon-binding domain of tRNA FY148_27445 PF09334 tRNA synthetases class I (M) FY148_27450 PF01209 ubiE/COQ5 methyltransferase family FY148_27455 PF01336 OB-fold nucleic acid binding domain FY148_27455 PF00152 tRNA synthetases class II (D, K and N) FY148_27460 PF02796 Helix-turn-helix domain of resolvase FY148_27460 PF00239 Resolvase, N terminal domain FY148_27470 PF00664 ABC transporter transmembrane region FY148_27470 PF00005 ABC transporter FY148_27475 PF13344 Haloacid dehalogenase-like hydrolase FY148_27475 PF00293 NUDIX domain FY148_27480 PF00293 NUDIX domain FY148_27485 PF01526 Tn3 transposase DDE domain FY148_27485 PF13700 Domain of unknown function (DUF4158) FY148_27500 PF17762 HTH domain found in ParB protein FY148_27500 PF02195 ParB-like nuclease domain