locus-tag	class	description
FY155_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FY155_00010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FY155_00015	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FY155_00020	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FY155_00025	COG1420	regulation of RNA biosynthetic process
FY155_00030	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FY155_00035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY155_00040	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FY155_00050	COG1137	ATPase activity
FY155_00055	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FY155_00065	COG0616	signal peptide processing
FY155_00070	COG0776	regulation of translation
FY155_00080	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FY155_00085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FY155_00090	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FY155_00105	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FY155_00110	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FY155_00115	COG0728	peptidoglycan biosynthetic process
FY155_00125	COG0180	Tryptophanyl-tRNA synthetase
FY155_00135	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FY155_00140	COG1214	PFAM Peptidase M22, glycoprotease
FY155_00160	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FY155_00165	COG1702	phosphate starvation-inducible protein PhoH
FY155_00170	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FY155_00180	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FY155_00185	COG1396	sequence-specific DNA binding
FY155_00190	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FY155_00195	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FY155_00200	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_00210	COG0242	peptide deformylase activity
FY155_00215	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FY155_00220	COG0101	tRNA pseudouridine synthase activity
FY155_00230	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY155_00235	COG2171	N-acyltransferase activity
FY155_00245	COG0840	transmembrane signaling receptor activity
FY155_00250	COG1957	nucleoside hydrolase
FY155_00255	COG0071	Belongs to the small heat shock protein (HSP20) family
FY155_00280	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FY155_00290	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FY155_00295	COG0706	membrane insertase activity
FY155_00300	COG0594	ribonuclease P activity
FY155_00305	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FY155_00310	COG0840	transmembrane signaling receptor activity
FY155_00325	COG2226	methyltransferase
FY155_00330	COG3842	ATPase activity
FY155_00335	COG1175	transmembrane transport
FY155_00340	COG0395	ABC-type sugar transport system, permease component
FY155_00355	COG0427	acetyl-CoA hydrolase
FY155_00365	COG3938	Belongs to the proline racemase family
FY155_00370	COG0418	dihydroorotase activity
FY155_00375	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FY155_00400	COG0166	Belongs to the GPI family
FY155_00405	COG0318	PFAM AMP-dependent synthetase and ligase
FY155_00410	COG3842	ATPase activity
FY155_00415	COG1840	ABC-type Fe3 transport system, periplasmic component
FY155_00420	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY155_00425	COG4774	siderophore transport
FY155_00470	COG2326	polyphosphate kinase activity
FY155_00475	COG5002	protein histidine kinase activity
FY155_00480	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FY155_00485	COG0573	inorganic phosphate transmembrane transporter activity
FY155_00495	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FY155_00500	COG0704	Plays a role in the regulation of phosphate uptake
FY155_00505	COG0745	RESPONSE REGULATOR receiver
FY155_00515	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FY155_00520	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FY155_00530	COG2967	ApaG domain
FY155_00545	COG0717	Belongs to the dCTP deaminase family
FY155_00555	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FY155_00605	COG0167	dihydroorotate dehydrogenase activity
FY155_00620	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY155_00640	COG1959	2 iron, 2 sulfur cluster binding
FY155_00645	COG1201	RNA secondary structure unwinding
FY155_00675	COG1960	acyl-CoA dehydrogenase activity
FY155_00680	COG0183	Belongs to the thiolase family
FY155_00685	COG1024	Enoyl-CoA hydratase
FY155_00685	COG1250	3-hydroxyacyl-CoA dehydrogenase
FY155_00785	COG0582	viral genome integration into host DNA
FY155_00810	COG1320	monovalent cation:proton antiporter activity
FY155_00815	COG2212	antiporter activity
FY155_00820	COG1863	multisubunit Na H antiporter MnhE subunit
FY155_00825	COG0651	ATP synthesis coupled electron transport
FY155_00830	COG1006	Multisubunit Na H antiporter MnhC subunit
FY155_00835	COG2111	Na H antiporter
FY155_00835	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FY155_00845	COG0840	transmembrane signaling receptor activity
FY155_00855	COG0745	RESPONSE REGULATOR receiver
FY155_00860	COG2198	Histidine kinase
FY155_00860	COG0643	Histidine kinase
FY155_00865	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FY155_00870	COG2201	protein-glutamate methylesterase activity
FY155_00875	COG0745	RESPONSE REGULATOR receiver
FY155_00880	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FY155_00890	COG1766	The M ring may be actively involved in energy transduction
FY155_00895	COG2771	luxR family
FY155_00905	COG2972	Histidine kinase
FY155_00905	COG0840	transmembrane signaling receptor activity
FY155_00910	COG2205	protein histidine kinase activity
FY155_00910	COG2198	Histidine kinase
FY155_00910	COG0784	Response regulator, receiver
FY155_00915	COG1970	mechanosensitive ion channel activity
FY155_00920	COG0436	Aminotransferase
FY155_00935	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FY155_00940	COG0424	maF-like protein
FY155_00945	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FY155_00955	COG5328	Belongs to the UPF0262 family
FY155_00960	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FY155_00970	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FY155_00990	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FY155_01000	COG1338	Plays a role in the flagellum-specific transport system
FY155_01010	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FY155_01020	COG1706	bacterial-type flagellum-dependent cell motility
FY155_01025	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FY155_01030	COG4786	Flagellar basal body rod
FY155_01035	COG1677	Flagellar hook-basal body complex protein FliE
FY155_01040	COG1558	bacterial-type flagellum-dependent cell motility
FY155_01045	COG1815	bacterial-type flagellum-dependent cell motility
FY155_01055	COG1157	protein secretion by the type III secretion system
FY155_01060	COG4786	Flagellar basal body rod
FY155_01070	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FY155_01075	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY155_01080	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY155_01085	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY155_01090	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FY155_01110	COG1360	Flagellar Motor Protein
FY155_01135	COG1749	Flagellar hook protein flgE
FY155_01155	COG5443	negative regulation of bacterial-type flagellum assembly
FY155_01160	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FY155_01170	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FY155_01210	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FY155_01215	COG1609	Transcriptional regulator
FY155_01220	COG1653	transport
FY155_01225	COG1175	transmembrane transport
FY155_01230	COG0395	ABC-type sugar transport system, permease component
FY155_01235	COG0366	Alpha amylase catalytic
FY155_01240	COG3842	ATPase activity
FY155_01255	COG0129	dihydroxy-acid dehydratase activity
FY155_01260	COG0363	glucosamine-6-phosphate deaminase activity
FY155_01265	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FY155_01270	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_01280	COG2081	HI0933 family
FY155_01300	COG2224	Isocitrate lyase
FY155_01315	COG3842	ATPase activity
FY155_01320	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY155_01325	COG1177	transmembrane transport
FY155_01335	COG2205	protein histidine kinase activity
FY155_01345	COG0248	Ppx GppA phosphatase
FY155_01350	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FY155_01355	COG0477	Major facilitator Superfamily
FY155_01385	COG0521	Mo-molybdopterin cofactor biosynthetic process
FY155_01390	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FY155_01400	COG0142	geranyltranstransferase activity
FY155_01425	COG0752	glycyl-tRNA synthetase alpha subunit
FY155_01435	COG1704	LemA family
FY155_01440	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FY155_01450	COG0751	glycine-tRNA ligase activity
FY155_01455	COG1683	Conserved Protein
FY155_01460	COG0840	transmembrane signaling receptor activity
FY155_01470	COG0151	Belongs to the GarS family
FY155_01475	COG2183	response to ionizing radiation
FY155_01480	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY155_01505	COG0583	DNA-binding transcription factor activity
FY155_01525	COG0306	phosphate transporter
FY155_01535	COG0561	phosphatase activity
FY155_01540	COG0438	transferase activity, transferring glycosyl groups
FY155_01545	COG2186	Transcriptional regulator
FY155_01560	COG0583	DNA-binding transcription factor activity
FY155_01565	COG0277	FAD linked oxidase domain protein
FY155_01570	COG0277	FAD linked oxidase domain protein
FY155_01575	COG0247	lactate metabolic process
FY155_01585	COG1376	ErfK ybiS ycfS ynhG family protein
FY155_01590	COG2818	Glycosylase
FY155_01600	COG2855	membrane
FY155_01605	COG0583	DNA-binding transcription factor activity
FY155_01635	COG0124	histidyl-tRNA synthetase
FY155_01645	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FY155_01650	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FY155_01655	COG2259	Doxx family
FY155_01665	COG0459	protein refolding
FY155_01670	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FY155_01680	COG0196	riboflavin kinase activity
FY155_01685	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FY155_01695	COG0590	tRNA wobble adenosine to inosine editing
FY155_01700	COG1187	pseudouridine synthase activity
FY155_01705	COG0742	ribosomal rna small subunit methyltransferase
FY155_01710	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY155_01720	COG0312	modulator of DNA gyrase
FY155_01725	COG0483	inositol monophosphate 1-phosphatase activity
FY155_01735	COG1519	Transferase
FY155_01745	COG1663	tetraacyldisaccharide 4'-kinase activity
FY155_01755	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FY155_01760	COG0745	RESPONSE REGULATOR receiver
FY155_01765	COG5001	Diguanylate cyclase
FY155_01765	COG3300	MHYT domain
FY155_01770	COG3386	PFAM SMP-30 Gluconolaconase
FY155_01775	COG0800	Aldolase
FY155_01780	COG3734	2-keto-3-deoxy-galactonokinase
FY155_01785	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_01790	COG1414	Transcriptional regulator
FY155_01795	COG2197	response regulator
FY155_01810	COG0598	Magnesium transport protein CorA
FY155_01815	COG3158	transport of potassium into the cell
FY155_01830	COG0356	it plays a direct role in the translocation of protons across the membrane
FY155_01840	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FY155_01845	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FY155_01860	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FY155_01880	COG0009	L-threonylcarbamoyladenylate synthase
FY155_01890	COG4638	Rieske (2fe-2S)
FY155_01915	COG1960	acyl-CoA dehydrogenase activity
FY155_01930	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FY155_01935	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FY155_01940	COG0840	transmembrane signaling receptor activity
FY155_01950	COG1522	sequence-specific DNA binding
FY155_01975	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FY155_01980	COG1741	Belongs to the pirin family
FY155_01985	COG1722	exodeoxyribonuclease VII activity
FY155_01990	COG0123	including yeast histone deacetylase and acetoin utilization protein
FY155_01995	COG1268	BioY protein
FY155_02000	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FY155_02005	COG1122	ATPase activity
FY155_02010	COG3214	Protein conserved in bacteria
FY155_02015	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY155_02015	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY155_02020	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FY155_02035	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FY155_02050	COG0259	pyridoxamine-phosphate oxidase activity
FY155_02080	COG0312	modulator of DNA gyrase
FY155_02095	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY155_02100	COG0109	protoheme IX farnesyltransferase activity
FY155_02105	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FY155_02120	COG3346	SURF1 family
FY155_02125	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FY155_02130	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FY155_02135	COG0328	RNA-DNA hybrid ribonuclease activity
FY155_02145	COG0678	peroxiredoxin activity
FY155_02145	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FY155_02155	COG1678	Uncharacterized ACR, COG1678
FY155_02160	COG3237	CsbD-like
FY155_02170	COG3300	MHYT domain
FY155_02170	COG5001	Diguanylate cyclase
FY155_02175	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FY155_02180	COG0612	Peptidase, M16
FY155_02205	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY155_02210	COG1802	Transcriptional regulator
FY155_02230	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FY155_02235	COG3609	addiction module antidote protein, CC2985 family
FY155_02240	COG3668	Plasmid stabilization system
FY155_02250	COG1194	a g-specific adenine glycosylase
FY155_02265	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FY155_02270	COG1196	nuclear chromosome segregation
FY155_02275	COG2514	catechol 2,3-dioxygenase activity
FY155_02280	COG0574	Belongs to the PEP-utilizing enzyme family
FY155_02280	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FY155_02295	COG1823	symporter activity
FY155_02320	COG0579	oxidoreductase
FY155_02335	COG2895	sulfate adenylyltransferase (ATP) activity
FY155_02340	COG0175	sulfate reduction
FY155_02345	COG0175	sulfate reduction
FY155_02350	COG1959	2 iron, 2 sulfur cluster binding
FY155_02355	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FY155_02360	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY155_02365	COG4208	sulfate ABC transporter
FY155_02370	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY155_02380	COG2199	diguanylate cyclase activity
FY155_02380	COG2200	EAL domain
FY155_02380	COG2203	Gaf domain
FY155_02390	COG1309	transcriptional regulator
FY155_02395	COG1012	belongs to the aldehyde dehydrogenase family
FY155_02400	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FY155_02430	COG0625	glutathione transferase activity
FY155_02440	COG0477	Major facilitator Superfamily
FY155_02450	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FY155_02450	COG1793	dna ligase
FY155_02470	COG1376	ErfK ybiS ycfS ynhG family protein
FY155_02475	COG1376	ErfK ybiS ycfS ynhG family protein
FY155_02480	COG1846	Transcriptional regulator
FY155_02485	COG1764	response to oxidative stress
FY155_02500	COG0488	(ABC) transporter
FY155_02535	COG4221	oxidoreductase activity
FY155_02550	COG0433	COG0433 Predicted ATPase
FY155_02560	COG1733	regulation of RNA biosynthetic process
FY155_02565	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
FY155_02580	COG0656	L-ascorbic acid biosynthetic process
FY155_02585	COG3781	membrane
FY155_02590	COG2378	regulation of single-species biofilm formation
FY155_02600	COG4106	trans-aconitate 2-methyltransferase activity
FY155_02605	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY155_02610	COG0840	transmembrane signaling receptor activity
FY155_02615	COG0583	DNA-binding transcription factor activity
FY155_02630	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FY155_02650	COG3909	cytochrome
FY155_02655	COG2010	Cytochrome c
FY155_02685	COG0789	Transcriptional regulator
FY155_02710	COG0517	IMP dehydrogenase activity
FY155_02710	COG4175	Glycine betaine
FY155_02715	COG4176	ABC-type proline glycine betaine transport system permease component
FY155_02740	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_02750	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY155_02750	COG2169	Transcriptional regulator
FY155_02760	COG2514	catechol 2,3-dioxygenase activity
FY155_02775	COG1272	protein, Hemolysin III
FY155_02785	COG1280	lysine exporter protein (LysE YggA)
FY155_02790	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FY155_02795	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FY155_02795	COG2111	Na H antiporter
FY155_02800	COG2111	Na H antiporter
FY155_02805	COG1006	Multisubunit Na H antiporter MnhC subunit
FY155_02810	COG0651	ATP synthesis coupled electron transport
FY155_02815	COG1863	multisubunit Na H antiporter MnhE subunit
FY155_02820	COG2212	antiporter activity
FY155_02825	COG1320	monovalent cation:proton antiporter activity
FY155_02830	COG4957	zinc ion binding
FY155_02845	COG2166	iron-sulfur cluster assembly
FY155_02855	COG2205	protein histidine kinase activity
FY155_02900	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY155_02905	COG2983	Belongs to the UPF0260 family
FY155_02915	COG3041	Addiction module toxin RelE StbE family
FY155_02920	COG3077	Addiction module antitoxin, RelB DinJ family
FY155_02930	COG2217	Heavy metal translocating P-type atpase
FY155_02965	COG1621	beta-fructofuranosidase activity
FY155_02970	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FY155_03020	COG4695	Portal protein
FY155_03125	COG4235	cytochrome complex assembly
FY155_03130	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FY155_03135	COG1138	Cytochrome C-type biogenesis protein
FY155_03140	COG3088	subunit of a heme lyase
FY155_03145	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY155_03150	COG0745	RESPONSE REGULATOR receiver
FY155_03155	COG2205	protein histidine kinase activity
FY155_03160	COG3011	Protein conserved in bacteria
FY155_03165	COG3713	MltA-interacting MipA family protein
FY155_03170	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FY155_03175	COG2202	Pas domain
FY155_03175	COG2205	protein histidine kinase activity
FY155_03185	COG0308	aminopeptidase N
FY155_03190	COG0697	spore germination
FY155_03205	COG0443	Heat shock 70 kDa protein
FY155_03240	COG0604	alcohol dehydrogenase
FY155_03245	COG1733	regulation of RNA biosynthetic process
FY155_03250	COG1968	undecaprenyl-diphosphatase activity
FY155_03255	COG2239	Acts as a magnesium transporter
FY155_03260	COG2814	Major facilitator Superfamily
FY155_03285	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FY155_03310	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FY155_03470	COG0741	lytic transglycosylase activity
FY155_03475	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_03480	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FY155_03485	COG0840	transmembrane signaling receptor activity
FY155_03495	COG1758	RNA polymerase activity
FY155_03515	COG0736	holo-[acyl-carrier-protein] synthase activity
FY155_03520	COG0681	Belongs to the peptidase S26 family
FY155_03525	COG0571	ribonuclease III activity
FY155_03530	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FY155_03540	COG0784	Response regulator, receiver
FY155_03545	COG1381	Involved in DNA repair and RecF pathway recombination
FY155_03555	COG2226	methyltransferase
FY155_03565	COG1418	mRNA catabolic process
FY155_03575	COG0346	lactoylglutathione lyase activity
FY155_03590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_03595	COG3443	Belongs to the bacterial solute-binding protein 9 family
FY155_03600	COG0668	transmembrane transport
FY155_03610	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FY155_03640	COG1742	UPF0060 membrane protein
FY155_03655	COG1183	phosphatidylcholine synthase activity
FY155_03660	COG0688	phosphatidylethanolamine metabolic process
FY155_03665	COG5265	(ABC) transporter
FY155_03705	COG2852	Protein conserved in bacteria
FY155_03710	COG0215	cysteine-tRNA ligase activity
FY155_03715	COG4221	oxidoreductase activity
FY155_03720	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FY155_03725	COG1286	toxin biosynthetic process
FY155_03745	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FY155_03755	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FY155_03765	COG5265	(ABC) transporter
FY155_03770	COG0305	Participates in initiation and elongation during chromosome replication
FY155_03790	COG0359	binds to the 23S rRNA
FY155_03800	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FY155_03805	COG0360	Binds together with S18 to 16S ribosomal RNA
FY155_03815	COG0667	Aldo Keto reductase
FY155_03820	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FY155_03830	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY155_03835	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY155_03845	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FY155_03850	COG1561	YicC-like family, N-terminal region
FY155_03855	COG0194	GDP metabolic process
FY155_03870	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FY155_03875	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY155_03885	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FY155_03900	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FY155_03925	COG3300	MHYT domain
FY155_03925	COG5001	Diguanylate cyclase
FY155_03930	COG4191	Histidine kinase
FY155_03935	COG4566	intracellular signal transduction
FY155_03945	COG0488	(ABC) transporter
FY155_03950	COG3706	GGDEF domain
FY155_03960	COG0105	UTP biosynthetic process
FY155_03980	COG0314	molybdopterin synthase activity
FY155_03990	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FY155_03995	COG0322	excinuclease ABC activity
FY155_04000	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_04015	COG3719	Belongs to the RNase T2 family
FY155_04025	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FY155_04030	COG0243	molybdopterin cofactor binding
FY155_04055	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FY155_04060	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FY155_04070	COG0628	permease
FY155_04080	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FY155_04085	COG0248	Ppx GppA phosphatase
FY155_04110	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FY155_04120	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FY155_04125	COG0477	Major facilitator Superfamily
FY155_04130	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FY155_04140	COG0840	transmembrane signaling receptor activity
FY155_04145	COG0659	secondary active sulfate transmembrane transporter activity
FY155_04155	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FY155_04160	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FY155_04170	COG0113	porphobilinogen synthase activity
FY155_04190	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FY155_04195	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FY155_04200	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FY155_04200	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FY155_04210	COG1280	lysine exporter protein (LysE YggA)
FY155_04215	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FY155_04220	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FY155_04225	COG2814	Major facilitator Superfamily
FY155_04230	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
FY155_04250	COG0416	fatty acid biosynthetic process
FY155_04255	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FY155_04260	COG0776	regulation of translation
FY155_04295	COG0601	transmembrane transport
FY155_04300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_04305	COG0444	Belongs to the ABC transporter superfamily
FY155_04315	COG0747	negative chemotaxis
FY155_04325	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FY155_04330	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FY155_04345	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FY155_04350	COG0583	DNA-binding transcription factor activity
FY155_04355	COG0737	Belongs to the 5'-nucleotidase family
FY155_04375	COG2897	thiosulfate sulfurtransferase activity
FY155_04390	COG0415	Belongs to the DNA photolyase family
FY155_04400	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY155_04430	COG3932	Exopolysaccharide synthesis, ExoD
FY155_04435	COG1238	metal cluster binding
FY155_04510	COG1612	heme a metabolic process
FY155_04520	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FY155_04525	COG0010	Belongs to the arginase family
FY155_04530	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FY155_04535	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FY155_04545	COG1832	CoA-binding protein
FY155_04570	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_04575	COG2124	cytochrome p450
FY155_04580	COG2199	diguanylate cyclase activity
FY155_04585	COG0740	serine-type endopeptidase activity
FY155_04590	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FY155_04595	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FY155_04605	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY155_04630	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY155_04635	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY155_04640	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY155_04650	COG0649	NAD binding
FY155_04660	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FY155_04665	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FY155_04675	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FY155_04680	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY155_04690	COG0713	ATP synthesis coupled electron transport
FY155_04705	COG1007	ATP synthesis coupled electron transport
FY155_04710	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FY155_04710	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FY155_04725	COG0442	prolyl-tRNA aminoacylation
FY155_04735	COG1136	(ABC) transporter
FY155_04750	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FY155_04770	COG0784	Response regulator, receiver
FY155_04780	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FY155_04785	COG0477	Major facilitator Superfamily
FY155_04800	COG0557	exoribonuclease II activity
FY155_04805	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FY155_04815	COG0758	DNA mediated transformation
FY155_04820	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FY155_04830	COG0540	Belongs to the ATCase OTCase family
FY155_04845	COG1960	acyl-CoA dehydrogenase activity
FY155_04850	COG0456	acetyltransferase
FY155_04870	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FY155_04875	COG2824	Alkylphosphonate utilization operon protein PhnA
FY155_04880	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FY155_04885	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FY155_04890	COG0154	amidase activity
FY155_04895	COG0456	acetyltransferase
FY155_04900	COG3811	Belongs to the UPF0386 family
FY155_04915	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FY155_04925	COG0456	acetyltransferase
FY155_04945	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FY155_04950	COG0439	Biotin carboxylase
FY155_04955	COG0511	ligase activity, forming carbon-carbon bonds
FY155_04960	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FY155_04970	COG0436	Aminotransferase
FY155_04990	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_04995	COG1530	ribonuclease E activity
FY155_05005	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY155_05025	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FY155_05030	COG0384	phenazine biosynthesis protein PhzF
FY155_05050	COG0633	Ferredoxin
FY155_05065	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FY155_05070	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FY155_05080	COG3768	UPF0283 membrane protein
FY155_05085	COG3106	COG3106 Predicted ATPase
FY155_05115	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FY155_05150	COG0537	adenosine 5'-monophosphoramidase activity
FY155_05175	COG0052	Belongs to the universal ribosomal protein uS2 family
FY155_05180	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FY155_05185	COG0528	UMP kinase activity
FY155_05190	COG0233	cytoplasmic translational termination
FY155_05195	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FY155_05205	COG0750	zinc metalloprotease
FY155_05210	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FY155_05215	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY155_05220	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY155_05225	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY155_05230	COG3494	Protein of unknown function (DUF1009)
FY155_05235	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY155_05240	COG2186	Transcriptional regulator
FY155_05250	COG0765	amino acid transport
FY155_05255	COG0765	amino acid transport
FY155_05265	COG0372	Belongs to the citrate synthase family
FY155_05280	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FY155_05290	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FY155_05295	COG0148	phosphopyruvate hydratase activity
FY155_05305	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FY155_05310	COG0022	dehydrogenase e1 component
FY155_05310	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY155_05315	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY155_05325	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FY155_05335	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FY155_05340	COG0697	spore germination
FY155_05355	COG2867	negative regulation of translational initiation
FY155_05360	COG1546	Belongs to the CinA family
FY155_05365	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FY155_05365	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FY155_05375	COG3852	Histidine kinase
FY155_05380	COG2204	response regulator
FY155_05385	COG5000	phosphorelay sensor kinase activity
FY155_05390	COG2204	response regulator
FY155_05395	COG0569	domain protein
FY155_05400	COG1923	regulation of RNA biosynthetic process
FY155_05405	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FY155_05410	COG3956	TIGRFAM MazG family protein
FY155_05420	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FY155_05420	COG1648	precorrin-2 dehydrogenase activity
FY155_05460	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FY155_05460	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FY155_05465	COG0509	glycine decarboxylation via glycine cleavage system
FY155_05470	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY155_05495	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FY155_05500	COG0564	pseudouridine synthase activity
FY155_05520	COG0251	oxidation-reduction process
FY155_05525	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FY155_05535	COG1671	Belongs to the UPF0178 family
FY155_05550	COG0450	alkyl hydroperoxide reductase
FY155_05560	COG0625	glutathione transferase activity
FY155_05570	COG2801	Transposase and inactivated derivatives
FY155_05575	COG0431	NADPH-dependent FMN reductase
FY155_05585	COG0798	PFAM Bile acid sodium symporter
FY155_05590	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FY155_05605	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FY155_05605	COG0321	lipoyl(octanoyl) transferase activity
FY155_05610	COG0084	hydrolase, TatD family'
FY155_05615	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY155_05625	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FY155_05675	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FY155_05680	COG2095	MarC family integral membrane protein
FY155_05685	COG0617	tRNA 3'-terminal CCA addition
FY155_05685	COG0517	IMP dehydrogenase activity
FY155_05685	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FY155_05695	COG0629	single-stranded DNA binding
FY155_05700	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FY155_05710	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FY155_05730	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY155_05735	COG1121	(ABC) transporter
FY155_05755	COG0667	Aldo Keto reductase
FY155_05765	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FY155_05850	COG2239	Acts as a magnesium transporter
FY155_05855	COG0243	molybdopterin cofactor binding
FY155_05865	COG0242	peptide deformylase activity
FY155_05875	COG2202	Pas domain
FY155_05875	COG2205	protein histidine kinase activity
FY155_05885	COG0321	lipoyl(octanoyl) transferase activity
FY155_05890	COG1064	alcohol dehydrogenase
FY155_05920	COG1862	Preprotein translocase
FY155_05940	COG2124	cytochrome p450
FY155_05955	COG0596	Alpha beta hydrolase
FY155_05965	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY155_05970	COG0626	cystathionine gamma-synthase activity
FY155_05975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_05980	COG4597	amino acid ABC transporter
FY155_05985	COG0765	amino acid transport
FY155_05990	COG1126	abc transporter atp-binding protein
FY155_06235	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FY155_06250	COG0436	Aminotransferase
FY155_06280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY155_06290	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY155_06295	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY155_06300	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FY155_06315	COG3243	poly(R)-hydroxyalkanoic acid synthase
FY155_06320	COG1489	DNA binding
FY155_06325	COG0024	Methionine aminopeptidase
FY155_06330	COG2003	Belongs to the UPF0758 family
FY155_06345	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
FY155_06370	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FY155_06375	COG0546	phosphoglycolate phosphatase activity
FY155_06385	COG0114	fumarate hydratase activity
FY155_06395	COG0504	CTP synthase activity
FY155_06405	COG0149	triose-phosphate isomerase activity
FY155_06415	COG0187	DNA topoisomerase II activity
FY155_06425	COG0740	serine-type endopeptidase activity
FY155_06435	COG0640	Transcriptional regulator
FY155_06440	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY155_06445	COG0745	RESPONSE REGULATOR receiver
FY155_06465	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FY155_06465	COG3264	Mechanosensitive ion channel
FY155_06530	COG1127	ABC transporter
FY155_06535	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FY155_06540	COG4948	Mandelate Racemase Muconate Lactonizing
FY155_06550	COG0281	malic enzyme
FY155_06550	COG0280	phosphate acetyltransferase
FY155_06560	COG0778	Nitroreductase
FY155_06565	COG0823	Involved in the tonB-independent uptake of proteins
FY155_06580	COG1368	sulfuric ester hydrolase activity
FY155_06600	COG3265	gluconokinase activity
FY155_06605	COG0544	peptidyl-prolyl cis-trans isomerase activity
FY155_06625	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
FY155_06645	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FY155_06660	COG0318	PFAM AMP-dependent synthetase and ligase
FY155_06670	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FY155_06670	COG0512	Glutamine amidotransferase of anthranilate synthase
FY155_06675	COG0343	queuine tRNA-ribosyltransferase activity
FY155_06680	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FY155_06695	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FY155_06710	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY155_06715	COG0134	indole-3-glycerol-phosphate synthase activity
FY155_06720	COG0315	cyclic pyranopterin monophosphate synthase activity
FY155_06725	COG0303	'Molybdopterin
FY155_06730	COG3706	GGDEF domain
FY155_06740	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FY155_06740	COG0475	glutathione-regulated potassium exporter activity
FY155_06750	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FY155_06760	COG2814	Major facilitator Superfamily
FY155_06765	COG0746	molybdenum cofactor guanylyltransferase activity
FY155_06770	COG1763	Mo-molybdopterin cofactor biosynthetic process
FY155_06775	COG0739	heme binding
FY155_06780	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FY155_06785	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FY155_06790	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FY155_06795	COG0805	protein transport
FY155_06800	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FY155_06805	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FY155_06810	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FY155_06815	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FY155_06820	COG1472	Belongs to the glycosyl hydrolase 3 family
FY155_06830	COG0018	arginyl-trna synthetase
FY155_06835	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FY155_06860	COG0525	valine-tRNA ligase activity
FY155_06870	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FY155_06900	COG0655	NAD(P)H dehydrogenase (quinone) activity
FY155_06905	COG1058	Belongs to the CinA family
FY155_06905	COG1546	Belongs to the CinA family
FY155_06910	COG0589	response to stress
FY155_06915	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FY155_06925	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FY155_06935	COG0640	Transcriptional regulator
FY155_06940	COG1914	H( )-stimulated, divalent metal cation uptake system
FY155_06950	COG1132	(ABC) transporter
FY155_06955	COG0628	permease
FY155_06990	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FY155_07000	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FY155_07010	COG0302	gtp cyclohydrolase
FY155_07015	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FY155_07020	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY155_07030	COG0516	GMP reductase activity
FY155_07030	COG0517	IMP dehydrogenase activity
FY155_07060	COG1760	l-serine dehydratase
FY155_07100	COG0583	DNA-binding transcription factor activity
FY155_07115	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FY155_07115	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FY155_07125	COG0347	Belongs to the P(II) protein family
FY155_07130	COG0174	glutamine synthetase
FY155_07160	COG0697	spore germination
FY155_07170	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FY155_07180	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FY155_07210	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FY155_07215	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FY155_07220	COG2186	Transcriptional regulator
FY155_07230	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY155_07235	COG4603	Belongs to the binding-protein-dependent transport system permease family
FY155_07240	COG3845	ABC transporter
FY155_07245	COG1183	phosphatidylcholine synthase activity
FY155_07250	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY155_07255	COG0679	Auxin Efflux Carrier
FY155_07260	COG0785	Cytochrome C biogenesis protein
FY155_07280	COG1278	Cold shock
FY155_07330	COG0577	efflux transmembrane transporter activity
FY155_07330	COG1136	(ABC) transporter
FY155_07335	COG0577	efflux transmembrane transporter activity
FY155_07335	COG1136	(ABC) transporter
FY155_07360	COG2151	metal-sulfur cluster biosynthetic enzyme
FY155_07365	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FY155_07370	COG0719	Fe-S assembly protein
FY155_07375	COG0396	ATPase activity
FY155_07380	COG0719	Fe-S assembly protein
FY155_07385	COG1104	cysteine desulfurase activity
FY155_07390	COG2945	thiolester hydrolase activity
FY155_07395	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FY155_07400	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FY155_07410	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FY155_07415	COG2833	Protein of unknown function (DUF455)
FY155_07420	COG0739	heme binding
FY155_07425	COG0513	Belongs to the DEAD box helicase family
FY155_07450	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FY155_07460	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FY155_07465	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FY155_07470	COG0047	phosphoribosylformylglycinamidine synthase activity
FY155_07485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY155_07490	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FY155_07515	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FY155_07520	COG2814	Major facilitator Superfamily
FY155_07525	COG0483	inositol monophosphate 1-phosphatase activity
FY155_07530	COG0483	inositol monophosphate 1-phosphatase activity
FY155_07535	COG0037	tRNA processing
FY155_07540	COG2066	Belongs to the glutaminase family
FY155_07545	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FY155_07550	COG0861	Integral membrane protein TerC family
FY155_07565	COG1280	lysine exporter protein (LysE YggA)
FY155_07575	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FY155_07580	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FY155_07590	COG0538	isocitrate dehydrogenase activity
FY155_07600	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FY155_07605	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FY155_07610	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_07615	COG2313	pseudouridylate synthase activity
FY155_07625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_07630	COG4215	(ABC) transporter
FY155_07640	COG5425	PFAM Usg family protein
FY155_07650	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY155_07655	COG1522	sequence-specific DNA binding
FY155_07660	COG1573	uracil-dna glycosylase
FY155_07670	COG2205	protein histidine kinase activity
FY155_07670	COG2202	Pas domain
FY155_07675	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FY155_07680	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FY155_07685	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FY155_07700	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY155_07705	COG0842	Transport permease protein
FY155_07710	COG1131	(ABC) transporter
FY155_07715	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY155_07715	COG0730	response to heat
FY155_07735	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FY155_07740	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY155_07760	COG0129	dihydroxy-acid dehydratase activity
FY155_07765	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FY155_07770	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FY155_07780	COG3739	integral membrane protein
FY155_07785	COG0203	ribosomal protein L17
FY155_07790	COG0202	RNA polymerase activity
FY155_07795	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FY155_07800	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FY155_07805	COG0563	adenylate kinase activity
FY155_07810	COG0201	protein transport
FY155_07815	COG0200	Binds to the 23S rRNA
FY155_07820	COG1841	ribosomal large subunit assembly
FY155_07825	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FY155_07830	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FY155_07835	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FY155_07840	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FY155_07845	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FY155_07850	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FY155_07855	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FY155_07860	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FY155_07865	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FY155_07870	COG0255	Belongs to the universal ribosomal protein uL29 family
FY155_07875	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FY155_07880	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FY155_07885	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FY155_07890	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FY155_07895	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FY155_07900	COG0089	rRNA binding
FY155_07905	COG0088	Forms part of the polypeptide exit tunnel
FY155_07910	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FY155_07915	COG0051	transcription antitermination factor activity, RNA binding
FY155_07920	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FY155_07925	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FY155_07930	COG0049	tRNA binding
FY155_07935	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FY155_07955	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FY155_07960	COG0085	RNA polymerase activity
FY155_07965	COG0222	ribosome binding
FY155_07970	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FY155_07975	COG0081	regulation of translation
FY155_07980	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FY155_07990	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FY155_08000	COG1086	Polysaccharide biosynthesis protein
FY155_08005	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FY155_08010	COG0861	Integral membrane protein TerC family
FY155_08015	COG3895	Periplasmic Protein
FY155_08035	COG1132	(ABC) transporter
FY155_08040	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY155_08060	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY155_08095	COG2198	Histidine kinase
FY155_08095	COG0784	Response regulator, receiver
FY155_08095	COG2205	protein histidine kinase activity
FY155_08095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_08100	COG0784	Response regulator, receiver
FY155_08105	COG2202	Pas domain
FY155_08105	COG3920	Histidine kinase
FY155_08110	COG0784	Response regulator, receiver
FY155_08115	COG4251	negative regulation of phosphorylation
FY155_08130	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FY155_08135	COG1607	acyl-coa hydrolase
FY155_08155	COG2910	NAD(P)H-binding
FY155_08160	COG1733	regulation of RNA biosynthetic process
FY155_08175	COG0556	nucleotide-excision repair
FY155_08185	COG2382	esterase
FY155_08205	COG0484	heat shock protein binding
FY155_08225	COG3706	GGDEF domain
FY155_08245	COG1840	ABC-type Fe3 transport system, periplasmic component
FY155_08250	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY155_08265	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FY155_08275	COG2207	Transcriptional regulator
FY155_08280	COG1064	alcohol dehydrogenase
FY155_08285	COG1252	NADH dehydrogenase
FY155_08290	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FY155_08295	COG2197	response regulator
FY155_08300	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FY155_08335	COG0656	L-ascorbic acid biosynthetic process
FY155_08350	COG0440	acetolactate synthase activity
FY155_08355	COG0028	Belongs to the TPP enzyme family
FY155_08365	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FY155_08370	COG0560	Phosphoserine phosphatase
FY155_08370	COG3830	Belongs to the UPF0237 family
FY155_08390	COG0330	HflC and HflK could
FY155_08395	COG0330	HflC and HflK could
FY155_08405	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FY155_08440	COG0277	FAD linked oxidase domain protein
FY155_08445	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY155_08485	COG1335	isochorismatase
FY155_08510	COG2264	protein methyltransferase activity
FY155_08515	COG1999	signal sequence binding
FY155_08525	COG0835	chemotaxis
FY155_08535	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FY155_08540	COG0583	DNA-binding transcription factor activity
FY155_08550	COG1247	-acetyltransferase
FY155_08560	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FY155_08565	COG0497	DNA recombination
FY155_08570	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FY155_08580	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY155_08585	COG0849	cell division
FY155_08590	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FY155_08595	COG1181	Belongs to the D-alanine--D-alanine ligase family
FY155_08600	COG0477	Major facilitator Superfamily
FY155_08605	COG5001	Diguanylate cyclase
FY155_08610	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FY155_08615	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FY155_08620	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FY155_08630	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FY155_08635	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FY155_08645	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FY155_08660	COG0275	rRNA processing
FY155_08665	COG2001	Belongs to the MraZ family
FY155_08670	COG3766	membrane
FY155_08680	COG0754	glutathionylspermidine amidase activity
FY155_08705	COG3023	N-Acetylmuramoyl-L-alanine amidase
FY155_08735	COG4106	trans-aconitate 2-methyltransferase activity
FY155_08755	COG2226	methyltransferase
FY155_08765	COG2267	carboxylic ester hydrolase activity
FY155_08770	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FY155_08800	COG1376	ErfK ybiS ycfS ynhG family protein
FY155_08805	COG2814	Major facilitator Superfamily
FY155_08835	COG1012	belongs to the aldehyde dehydrogenase family
FY155_08840	COG0174	glutamine synthetase
FY155_08845	COG0531	amino acid
FY155_08855	COG1737	Transcriptional regulator
FY155_08860	COG2182	Extracellular solute-binding protein
FY155_08875	COG3842	ATPase activity
FY155_08940	COG2968	Membrane
FY155_08950	COG0432	Pfam Uncharacterised protein family UPF0047
FY155_08965	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FY155_08970	COG0358	DNA primase activity
FY155_08995	COG0505	Belongs to the CarA family
FY155_09000	COG0534	Mate efflux family protein
FY155_09015	COG2321	neutral zinc metallopeptidase
FY155_09030	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FY155_09040	COG3706	GGDEF domain
FY155_09055	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FY155_09065	COG1522	sequence-specific DNA binding
FY155_09070	COG0492	ferredoxin-NADP+ reductase activity
FY155_09075	COG0583	DNA-binding transcription factor activity
FY155_09085	COG1902	pentaerythritol trinitrate reductase activity
FY155_09110	COG0387	Pfam Sodium calcium exchanger
FY155_09115	COG0436	Aminotransferase
FY155_09120	COG2199	diguanylate cyclase activity
FY155_09120	COG2200	EAL domain
FY155_09135	COG1278	Cold shock
FY155_09140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY155_09150	COG1846	Transcriptional regulator
FY155_09155	COG0745	RESPONSE REGULATOR receiver
FY155_09165	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY155_09185	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FY155_09195	COG1496	oxidoreductase activity
FY155_09210	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FY155_09220	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FY155_09235	COG0840	transmembrane signaling receptor activity
FY155_09240	COG1012	belongs to the aldehyde dehydrogenase family
FY155_09245	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FY155_09250	COG5001	Diguanylate cyclase
FY155_09250	COG3300	MHYT domain
FY155_09255	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FY155_09260	COG5001	Diguanylate cyclase
FY155_09270	COG0193	aminoacyl-tRNA hydrolase activity
FY155_09280	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FY155_09305	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FY155_09315	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FY155_09315	COG2857	Cytochrome c1
FY155_09335	COG1132	(ABC) transporter
FY155_09340	COG1132	(ABC) transporter
FY155_09345	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FY155_09350	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FY155_09365	COG0408	coproporphyrinogen oxidase activity
FY155_09380	COG0617	tRNA 3'-terminal CCA addition
FY155_09395	COG0714	Associated with various cellular activities
FY155_09415	COG0454	-acetyltransferase
FY155_09430	COG0477	Major facilitator Superfamily
FY155_09440	COG0435	Glutathione S-transferase
FY155_09445	COG0494	nUDIX hydrolase
FY155_09460	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FY155_09465	COG3135	benzoate transporter
FY155_09490	COG0740	serine-type endopeptidase activity
FY155_09505	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FY155_09510	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FY155_09535	COG4175	Glycine betaine
FY155_09555	COG1435	thymidine kinase activity
FY155_09580	COG1629	transport
FY155_09580	COG4771	TonB-dependent receptor
FY155_09590	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FY155_09590	COG0512	Glutamine amidotransferase of anthranilate synthase
FY155_09605	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FY155_09615	COG0366	Alpha amylase catalytic
FY155_09620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_09640	COG1160	GTP binding
FY155_09660	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FY155_09670	COG0024	Methionine aminopeptidase
FY155_09680	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_09700	COG0583	DNA-binding transcription factor activity
FY155_09715	COG0402	S-adenosylhomocysteine deaminase activity
FY155_09725	COG1304	FMN binding
FY155_09735	COG1309	transcriptional regulator
FY155_09740	COG1686	Belongs to the peptidase S11 family
FY155_09750	COG2351	hydroxyisourate hydrolase activity
FY155_09755	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FY155_09780	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY155_09790	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FY155_09790	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_09800	COG0513	Belongs to the DEAD box helicase family
FY155_09810	COG2259	Doxx family
FY155_09815	COG1376	ErfK ybiS ycfS ynhG family protein
FY155_09825	COG2308	Evidence 4 Homologs of previously reported genes of
FY155_09835	COG1305	Transglutaminase-like
FY155_09860	COG4214	carbohydrate transport
FY155_09870	COG4213	ABC transporter substrate-binding protein
FY155_09905	COG0840	transmembrane signaling receptor activity
FY155_09920	COG0646	methionine synthase
FY155_09920	COG1410	methionine synthase
FY155_09965	COG1215	transferase activity, transferring glycosyl groups
FY155_09995	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FY155_10000	COG2346	COG2346, Truncated hemoglobins
FY155_10020	COG1309	transcriptional regulator
FY155_10035	COG0494	nUDIX hydrolase
FY155_10045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_10050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_10080	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FY155_10085	COG0830	nickel cation binding
FY155_10090	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
FY155_10105	COG0804	urea catabolic process
FY155_10110	COG1442	glycosyl transferase family 8
FY155_10115	COG3755	Protein conserved in bacteria
FY155_10125	COG0832	Belongs to the urease beta subunit family
FY155_10130	COG3813	Protein conserved in bacteria
FY155_10135	COG0831	urea catabolic process
FY155_10140	COG0829	nickel cation binding
FY155_10160	COG0411	ABC transporter
FY155_10170	COG0559	Belongs to the binding-protein-dependent transport system permease family
FY155_10185	COG0174	glutamine synthetase
FY155_10190	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_10195	COG2198	Histidine kinase
FY155_10195	COG5002	protein histidine kinase activity
FY155_10195	COG0784	Response regulator, receiver
FY155_10210	COG0726	polysaccharide deacetylase
FY155_10245	COG1218	3'(2'),5'-bisphosphate nucleotidase
FY155_10320	COG0564	pseudouridine synthase activity
FY155_10330	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FY155_10340	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FY155_10365	COG0346	lactoylglutathione lyase activity
FY155_10375	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FY155_10385	COG2832	Protein of unknown function (DUF454)
FY155_10390	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FY155_10395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_10400	COG4558	Periplasmic binding protein
FY155_10410	COG3721	Heme iron utilization protein
FY155_10425	COG3655	Transcriptional regulator
FY155_10440	COG3657	addiction module killer protein
FY155_10450	COG2205	protein histidine kinase activity
FY155_10490	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_10495	COG4605	iron ion homeostasis
FY155_10500	COG4604	ABC transporter, ATP-binding protein
FY155_10505	COG0783	Belongs to the Dps family
FY155_10520	COG2972	Histidine kinase
FY155_10520	COG0840	transmembrane signaling receptor activity
FY155_10525	COG0656	L-ascorbic acid biosynthetic process
FY155_10530	COG2814	Major facilitator Superfamily
FY155_10540	COG0583	DNA-binding transcription factor activity
FY155_10545	COG0657	acetylesterase activity
FY155_10550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_10570	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY155_10575	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FY155_10580	COG0288	reversible hydration of carbon dioxide
FY155_10590	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FY155_10610	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FY155_10615	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY155_10620	COG0778	Nitroreductase
FY155_10625	COG2267	carboxylic ester hydrolase activity
FY155_10630	COG0251	oxidation-reduction process
FY155_10635	COG1335	isochorismatase
FY155_10640	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_10650	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_10665	COG1175	transmembrane transport
FY155_10670	COG0395	ABC-type sugar transport system, permease component
FY155_10675	COG3842	ATPase activity
FY155_10680	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_10690	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY155_10705	COG4608	Belongs to the ABC transporter superfamily
FY155_10710	COG0444	Belongs to the ABC transporter superfamily
FY155_10715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_10720	COG0601	transmembrane transport
FY155_10775	COG2159	amidohydrolase
FY155_10780	COG1960	acyl-CoA dehydrogenase activity
FY155_10810	COG0745	RESPONSE REGULATOR receiver
FY155_10820	COG1902	pentaerythritol trinitrate reductase activity
FY155_10820	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY155_10825	COG3842	ATPase activity
FY155_10835	COG1840	ABC-type Fe3 transport system, periplasmic component
FY155_10840	COG1840	ABC-type Fe3 transport system, periplasmic component
FY155_10845	COG0745	RESPONSE REGULATOR receiver
FY155_10855	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FY155_10860	COG0583	DNA-binding transcription factor activity
FY155_10865	COG1278	Cold shock
FY155_10875	COG4221	oxidoreductase activity
FY155_10880	COG0625	glutathione transferase activity
FY155_10900	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY155_10905	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY155_10920	COG3077	Addiction module antitoxin, RelB DinJ family
FY155_10955	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_10965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_10970	COG4597	amino acid ABC transporter
FY155_10975	COG0765	amino acid transport
FY155_11000	COG0747	negative chemotaxis
FY155_11005	COG0601	transmembrane transport
FY155_11010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_11015	COG0444	Belongs to the ABC transporter superfamily
FY155_11040	COG4213	ABC transporter substrate-binding protein
FY155_11045	COG1129	ABC transporter
FY155_11050	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_11065	COG0667	Aldo Keto reductase
FY155_11090	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_11095	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_11100	COG1129	ABC transporter
FY155_11120	COG3920	Histidine kinase
FY155_11145	COG0753	catalase activity
FY155_11165	COG1278	Cold shock
FY155_11180	COG0604	alcohol dehydrogenase
FY155_11190	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_11195	COG1902	pentaerythritol trinitrate reductase activity
FY155_11200	COG4221	oxidoreductase activity
FY155_11205	COG1309	transcriptional regulator
FY155_11220	COG1280	lysine exporter protein (LysE YggA)
FY155_11230	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FY155_11275	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FY155_11280	COG1309	transcriptional regulator
FY155_11285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_11290	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY155_11300	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FY155_11305	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FY155_11325	COG0583	DNA-binding transcription factor activity
FY155_11330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_11335	COG0725	ABC transporter, periplasmic molybdate-binding protein
FY155_11340	COG4149	molybdate abc transporter
FY155_11345	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FY155_11360	COG2022	thiamine diphosphate biosynthetic process
FY155_11375	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FY155_11385	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY155_11395	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FY155_11415	COG1132	(ABC) transporter
FY155_11420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FY155_11465	COG4166	transmembrane transport
FY155_11470	COG0601	transmembrane transport
FY155_11475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_11490	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FY155_11495	COG3142	Participates in the control of copper homeostasis
FY155_11500	COG2814	Major facilitator Superfamily
FY155_11515	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_11520	COG1737	Transcriptional regulator
FY155_11530	COG3842	ATPase activity
FY155_11540	COG0395	ABC-type sugar transport system, permease component
FY155_11560	COG2188	Transcriptional regulator
FY155_11565	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FY155_11570	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FY155_11575	COG1940	carbohydrate kinase activity
FY155_11585	COG0671	phosphoesterase, PA-phosphatase related
FY155_11590	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FY155_11595	COG0156	8-amino-7-oxononanoate synthase activity
FY155_11605	COG0729	surface antigen
FY155_11615	COG0835	chemotaxis
FY155_11625	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FY155_11630	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FY155_11635	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FY155_11640	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FY155_11645	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FY155_11650	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FY155_11665	COG4974	Belongs to the 'phage' integrase family
FY155_11690	COG1280	lysine exporter protein (LysE YggA)
FY155_11700	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY155_11705	COG0567	Dehydrogenase, E1 component
FY155_11710	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FY155_11715	COG0045	succinate-CoA ligase (ADP-forming) activity
FY155_11720	COG0039	L-malate dehydrogenase activity
FY155_11725	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FY155_11760	COG2264	protein methyltransferase activity
FY155_11775	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FY155_11780	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FY155_11785	COG0181	hydroxymethylbilane synthase activity
FY155_11825	COG1872	DUF167
FY155_11830	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FY155_11840	COG1217	gtp-binding protein TYPA
FY155_11845	COG0339	signal peptide processing
FY155_11850	COG1846	Transcriptional regulator
FY155_11860	COG0137	argininosuccinate synthase activity
FY155_11870	COG1280	lysine exporter protein (LysE YggA)
FY155_11875	COG1122	ATPase activity
FY155_11880	COG4120	Belongs to the binding-protein-dependent transport system permease family
FY155_11890	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FY155_11905	COG2154	pterin-4-alpha-carbinolamine dehydratase
FY155_11910	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FY155_11915	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FY155_11925	COG4181	ATPase activity
FY155_11935	COG0670	Belongs to the BI1 family
FY155_11950	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FY155_11955	COG4133	protoheme IX ABC transporter activity
FY155_11960	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FY155_11965	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FY155_11990	COG2917	probably involved in intracellular septation
FY155_11995	COG0552	protein localization to endoplasmic reticulum
FY155_12000	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FY155_12005	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FY155_12020	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FY155_12025	COG1605	Chorismate mutase
FY155_12025	COG0287	Prephenate dehydrogenase
FY155_12030	COG0228	four-way junction DNA binding
FY155_12035	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FY155_12040	COG0336	Belongs to the RNA methyltransferase TrmD family
FY155_12050	COG0335	large ribosomal subunit rRNA binding
FY155_12055	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY155_12060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_12075	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FY155_12095	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FY155_12115	COG0488	(ABC) transporter
FY155_12125	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FY155_12135	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FY155_12140	COG0142	geranyltranstransferase activity
FY155_12145	COG2885	chlorophyll binding
FY155_12150	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FY155_12155	COG2223	nitrite transmembrane transporter activity
FY155_12160	COG1349	DNA-binding transcription factor activity
FY155_12165	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FY155_12170	COG2197	response regulator
FY155_12175	COG1132	(ABC) transporter
FY155_12185	COG3459	Glycosyltransferase 36 associated
FY155_12190	COG1473	amidohydrolase
FY155_12195	COG0579	oxidoreductase
FY155_12205	COG0129	dihydroxy-acid dehydratase activity
FY155_12210	COG2084	Dehydrogenase
FY155_12215	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY155_12220	COG0277	FAD linked oxidase domain protein
FY155_12225	COG2186	Transcriptional regulator
FY155_12235	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY155_12240	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY155_12245	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY155_12250	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FY155_12260	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FY155_12265	COG0495	leucyl-tRNA aminoacylation
FY155_12280	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FY155_12285	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FY155_12300	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY155_12305	COG1946	Acyl-CoA thioesterase
FY155_12310	COG0347	Belongs to the P(II) protein family
FY155_12315	COG0004	ammonium transporteR
FY155_12320	COG1674	ftsk spoiiie
FY155_12325	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FY155_12340	COG0745	RESPONSE REGULATOR receiver
FY155_12350	COG1329	Transcriptional regulator
FY155_12355	COG2902	Dehydrogenase
FY155_12360	COG2270	Major facilitator Superfamily
FY155_12375	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_12390	COG0494	nUDIX hydrolase
FY155_12395	COG2861	carbohydrate metabolic process
FY155_12400	COG0793	Belongs to the peptidase S41A family
FY155_12410	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FY155_12415	COG0799	negative regulation of ribosome biogenesis
FY155_12420	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FY155_12425	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FY155_12430	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FY155_12435	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FY155_12450	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FY155_12455	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FY155_12480	COG0066	3-isopropylmalate dehydratase activity
FY155_12485	COG0473	3-isopropylmalate dehydrogenase activity
FY155_12490	COG1858	cytochrome C peroxidase
FY155_12495	COG1797	cobyrinic acid a,c-diamide synthase activity
FY155_12505	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
FY155_12570	COG1492	cobalamin metabolic process
FY155_12585	COG4948	Mandelate Racemase Muconate Lactonizing
FY155_12590	COG3254	rhamnose metabolic process
FY155_12600	COG1063	alcohol dehydrogenase
FY155_12625	COG1129	ABC transporter
FY155_12630	COG2186	Transcriptional regulator
FY155_12635	COG2721	sulfolactate sulfo-lyase activity
FY155_12640	COG0138	bifunctional purine biosynthesis protein purh
FY155_12650	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FY155_12650	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FY155_12655	COG0501	Belongs to the peptidase M48B family
FY155_12675	COG0357	Ribosomal RNA small subunit methyltransferase G
FY155_12680	COG0445	tRNA wobble uridine modification
FY155_12685	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FY155_12690	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FY155_12695	COG1981	membrane
FY155_12700	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FY155_12705	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FY155_12710	COG0424	maF-like protein
FY155_12715	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FY155_12720	COG0237	dephospho-CoA kinase activity
FY155_12730	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FY155_12735	COG3030	protein affecting phage T7 exclusion by the F plasmid
FY155_12745	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FY155_12770	COG0179	Fumarylacetoacetate (FAA) hydrolase
FY155_12785	COG0135	phosphoribosylanthranilate isomerase activity
FY155_12790	COG0133	tryptophan synthase activity
FY155_12795	COG0159	tryptophan synthase activity
FY155_12800	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FY155_12815	COG1074	ATP-dependent DNA helicase activity
FY155_12825	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FY155_12830	COG0802	atpase or kinase
FY155_12835	COG2205	protein histidine kinase activity
FY155_12840	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FY155_12845	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY155_12850	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY155_12850	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FY155_12855	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FY155_12860	COG0642	Histidine kinase
FY155_12865	COG0745	RESPONSE REGULATOR receiver
FY155_12870	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FY155_12880	COG1652	LysM domain
FY155_12885	COG1072	(Pantothenic acid kinase))
FY155_12890	COG0140	phosphoribosyl-ATP diphosphatase activity
FY155_12895	COG0107	imidazoleglycerol-phosphate synthase activity
FY155_12900	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FY155_12905	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FY155_12915	COG0131	Imidazoleglycerol-phosphate dehydratase
FY155_12920	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FY155_12925	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FY155_12935	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FY155_12950	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FY155_12960	COG1643	Atp-dependent helicase
FY155_13020	COG1072	(Pantothenic acid kinase))
FY155_13030	COG1780	Probably involved in ribonucleotide reductase function
FY155_13050	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FY155_13080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_13090	COG2813	Specifically methylates the guanine in position
FY155_13095	COG1185	polyribonucleotide nucleotidyltransferase activity
FY155_13100	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FY155_13105	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FY155_13110	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FY155_13115	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FY155_13115	COG3064	Membrane
FY155_13130	COG0779	Required for maturation of 30S ribosomal subunits
FY155_13135	COG2814	Major facilitator Superfamily
FY155_13145	COG2951	lytic endotransglycosylase activity
FY155_13150	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FY155_13160	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FY155_13165	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FY155_13180	COG2816	NAD+ diphosphatase activity
FY155_13185	COG0077	Prephenate dehydratase
FY155_13185	COG1605	Chorismate mutase
FY155_13190	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FY155_13195	COG3474	cytochrome
FY155_13205	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY155_13210	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FY155_13215	COG1278	Cold shock
FY155_13220	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY155_13230	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FY155_13230	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FY155_13240	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FY155_13270	COG2900	Belongs to the SlyX family
FY155_13280	COG0484	heat shock protein binding
FY155_13285	COG0443	Heat shock 70 kDa protein
FY155_13300	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FY155_13305	COG1744	ABC transporter substrate-binding protein PnrA-like
FY155_13310	COG3845	ABC transporter
FY155_13315	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY155_13320	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY155_13325	COG0295	cytidine deaminase activity
FY155_13335	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FY155_13340	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FY155_13350	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FY155_13355	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FY155_13360	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FY155_13370	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FY155_13375	COG1845	cytochrome c oxidase, subunit III
FY155_13380	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY155_13385	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FY155_13390	COG0477	Major facilitator Superfamily
FY155_13395	COG0070	glutamate synthase
FY155_13395	COG0069	glutamate synthase activity
FY155_13395	COG0067	glutamate synthase
FY155_13400	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FY155_13415	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FY155_13425	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY155_13455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_13475	COG0848	biopolymer transport protein
FY155_13485	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY155_13500	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY155_13505	COG3454	Phosphonate metabolism
FY155_13510	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY155_13515	COG3639	organic phosphonate transmembrane transporter activity
FY155_13520	COG3639	organic phosphonate transmembrane transporter activity
FY155_13525	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FY155_13530	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FY155_13540	COG4778	phosphonate C-P lyase system protein PhnL
FY155_13545	COG4107	phosphonate C-P lyase system protein PhnK
FY155_13550	COG3627	carbon phosphorus lyase activity
FY155_13555	COG3626	phosphonate metabolism
FY155_13560	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FY155_13565	COG3624	Phosphonate C-P lyase system protein PhnG
FY155_13570	COG2188	Transcriptional regulator
FY155_13575	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FY155_13580	COG0837	glucose binding
FY155_13585	COG1803	Methylglyoxal synthase
FY155_13590	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
FY155_13595	COG4166	transmembrane transport
FY155_13600	COG4174	ABC transporter (Permease)
FY155_13605	COG4239	(ABC) transporter, permease
FY155_13610	COG4172	Belongs to the ABC transporter superfamily
FY155_13615	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_13620	COG0174	glutamine synthetase
FY155_13625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_13630	COG3265	gluconokinase activity
FY155_13635	COG1174	glycine betaine transport
FY155_13640	COG1125	glycine betaine transport
FY155_13645	COG1174	glycine betaine transport
FY155_13650	COG1732	Glycine betaine
FY155_13660	COG1959	2 iron, 2 sulfur cluster binding
FY155_13665	COG1840	ABC-type Fe3 transport system, periplasmic component
FY155_13675	COG4269	membrane
FY155_13690	COG0697	spore germination
FY155_13705	COG0791	NLP P60 protein
FY155_13715	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FY155_13720	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FY155_13755	COG4964	Belongs to the GSP D family
FY155_13800	COG3422	double-strand break repair
FY155_13805	COG3757	hydrolase, family 25
FY155_13810	COG0697	spore germination
FY155_13815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY155_13830	COG0492	ferredoxin-NADP+ reductase activity
FY155_13845	COG0481	GTPase activity
FY155_13850	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY155_13865	COG1396	sequence-specific DNA binding
FY155_13880	COG2169	Transcriptional regulator
FY155_13880	COG1917	Cupin 2, conserved barrel domain protein
FY155_13885	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FY155_13910	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FY155_13915	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FY155_13920	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FY155_13930	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FY155_13935	COG0072	phenylalanine-tRNA ligase activity
FY155_13935	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY155_13940	COG0667	Aldo Keto reductase
FY155_13960	COG4977	sequence-specific DNA binding
FY155_13985	COG1570	exodeoxyribonuclease VII activity
FY155_13990	COG4948	Mandelate Racemase Muconate Lactonizing
FY155_14000	COG1846	Transcriptional regulator
FY155_14005	COG0697	spore germination
FY155_14010	COG2309	aminopeptidase activity
FY155_14015	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FY155_14020	COG1393	Belongs to the ArsC family
FY155_14035	COG1309	transcriptional regulator
FY155_14045	COG0519	Catalyzes the synthesis of GMP from XMP
FY155_14045	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FY155_14060	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
FY155_14090	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FY155_14100	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FY155_14110	COG1968	undecaprenyl-diphosphatase activity
FY155_14125	COG0284	orotidine-5'-phosphate decarboxylase activity
FY155_14135	COG3963	phosphatidate phosphatase activity
FY155_14145	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FY155_14150	COG0792	nuclease activity
FY155_14165	COG1175	transmembrane transport
FY155_14170	COG0395	ABC-type sugar transport system, permease component
FY155_14175	COG3842	ATPase activity
FY155_14185	COG0189	ligase activity
FY155_14195	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FY155_14200	COG1280	lysine exporter protein (LysE YggA)
FY155_14205	COG0756	dUTP diphosphatase activity
FY155_14210	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FY155_14215	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FY155_14230	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FY155_14235	COG2226	methyltransferase
FY155_14240	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FY155_14245	COG1024	Enoyl-CoA hydratase
FY155_14250	COG0268	Binds directly to 16S ribosomal RNA
FY155_14280	COG1278	Cold shock
FY155_14315	COG0411	ABC transporter
FY155_14320	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FY155_14325	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY155_14330	COG1454	alcohol dehydrogenase
FY155_14335	COG0747	negative chemotaxis
FY155_14340	COG0601	transmembrane transport
FY155_14350	COG4608	Belongs to the ABC transporter superfamily
FY155_14355	COG1349	DNA-binding transcription factor activity
FY155_14360	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY155_14385	COG4302	ethanolamine ammonia-lyase activity
FY155_14390	COG0025	NhaP-type Na H and K H
FY155_14395	COG4106	trans-aconitate 2-methyltransferase activity
FY155_14410	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_14415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_14420	COG0601	transmembrane transport
FY155_14445	COG4172	Belongs to the ABC transporter superfamily
FY155_14450	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FY155_14480	COG0596	Alpha beta hydrolase
FY155_14495	COG1764	response to oxidative stress
FY155_14505	COG0596	Alpha beta hydrolase
FY155_14520	COG0783	Belongs to the Dps family
FY155_14525	COG0243	molybdopterin cofactor binding
FY155_14535	COG4566	intracellular signal transduction
FY155_14540	COG4566	intracellular signal transduction
FY155_14550	COG2140	Oxalate decarboxylase
FY155_14570	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY155_14580	COG1414	Transcriptional regulator
FY155_14595	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_14615	COG1522	sequence-specific DNA binding
FY155_14640	COG0628	permease
FY155_14650	COG2235	arginine
FY155_14685	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY155_14695	COG0702	epimerase
FY155_14700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY155_14705	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_14710	COG0745	RESPONSE REGULATOR receiver
FY155_14715	COG5002	protein histidine kinase activity
FY155_14730	COG2233	PERMEase
FY155_14790	COG0395	ABC-type sugar transport system, permease component
FY155_14795	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY155_14805	COG3842	ATPase activity
FY155_14840	COG1653	transport
FY155_14850	COG0395	ABC-type sugar transport system, permease component
FY155_14855	COG3842	ATPase activity
FY155_14870	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY155_14875	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_14880	COG1116	anion transmembrane transporter activity
FY155_14885	COG0395	ABC-type sugar transport system, permease component
FY155_14890	COG1175	transmembrane transport
FY155_14920	COG1609	Transcriptional regulator
FY155_14935	COG1082	Xylose isomerase domain protein TIM barrel
FY155_14950	COG3842	ATPase activity
FY155_14955	COG0395	ABC-type sugar transport system, permease component
FY155_14960	COG1175	transmembrane transport
FY155_14965	COG1653	transport
FY155_14970	COG1309	transcriptional regulator
FY155_14975	COG0673	inositol 2-dehydrogenase activity
FY155_14990	COG0673	inositol 2-dehydrogenase activity
FY155_14995	COG1278	Cold shock
FY155_15005	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FY155_15025	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY155_15030	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FY155_15045	COG3842	ATPase activity
FY155_15050	COG0395	ABC-type sugar transport system, permease component
FY155_15055	COG1175	transmembrane transport
FY155_15065	COG3618	amidohydrolase
FY155_15070	COG4948	Mandelate Racemase Muconate Lactonizing
FY155_15075	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_15080	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_15085	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
FY155_15090	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY155_15095	COG2186	Transcriptional regulator
FY155_15110	COG0667	Aldo Keto reductase
FY155_15140	COG4977	sequence-specific DNA binding
FY155_15145	COG2223	nitrite transmembrane transporter activity
FY155_15150	COG1609	Transcriptional regulator
FY155_15155	COG1063	alcohol dehydrogenase
FY155_15160	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_15170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_15175	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
FY155_15180	COG1175	transmembrane transport
FY155_15185	COG0395	ABC-type sugar transport system, permease component
FY155_15200	COG0395	ABC-type sugar transport system, permease component
FY155_15210	COG2182	Extracellular solute-binding protein
FY155_15215	COG0626	cystathionine gamma-synthase activity
FY155_15230	COG0454	-acetyltransferase
FY155_15235	COG0803	Belongs to the bacterial solute-binding protein 9 family
FY155_15245	COG1121	(ABC) transporter
FY155_15250	COG0523	cobalamin synthesis protein
FY155_15265	COG0523	cobalamin synthesis protein
FY155_15270	COG1653	transport
FY155_15275	COG1175	transmembrane transport
FY155_15280	COG0395	ABC-type sugar transport system, permease component
FY155_15285	COG3842	ATPase activity
FY155_15295	COG3047	cAMP biosynthetic process
FY155_15320	COG0583	DNA-binding transcription factor activity
FY155_15325	COG1879	ABC-type sugar transport system periplasmic component
FY155_15330	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_15335	COG1129	ABC transporter
FY155_15345	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY155_15350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_15360	COG3257	ureidoglycine aminohydrolase activity
FY155_15370	COG5001	Diguanylate cyclase
FY155_15375	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY155_15385	COG0747	negative chemotaxis
FY155_15390	COG0601	transmembrane transport
FY155_15395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_15405	COG4608	Belongs to the ABC transporter superfamily
FY155_15410	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FY155_15425	COG0346	lactoylglutathione lyase activity
FY155_15435	COG0129	dihydroxy-acid dehydratase activity
FY155_15440	COG1879	ABC-type sugar transport system periplasmic component
FY155_15445	COG1129	ABC transporter
FY155_15450	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_15455	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_15460	COG2186	Transcriptional regulator
FY155_15475	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY155_15480	COG0587	DNA-directed DNA polymerase activity
FY155_15510	COG0673	inositol 2-dehydrogenase activity
FY155_15520	COG3842	ATPase activity
FY155_15525	COG0395	ABC-type sugar transport system, permease component
FY155_15530	COG1175	transmembrane transport
FY155_15535	COG1653	transport
FY155_15545	COG0673	inositol 2-dehydrogenase activity
FY155_15560	COG5001	Diguanylate cyclase
FY155_15575	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FY155_15580	COG2894	cell division
FY155_15585	COG0850	regulation of cytokinetic process
FY155_15590	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY155_15595	COG2186	Transcriptional regulator
FY155_15600	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY155_15610	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY155_15615	COG1063	alcohol dehydrogenase
FY155_15620	COG1312	Catalyzes the dehydration of D-mannonate
FY155_15640	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY155_15645	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY155_15645	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY155_15650	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_15665	COG0625	glutathione transferase activity
FY155_15670	COG4172	Belongs to the ABC transporter superfamily
FY155_15675	COG1921	L-seryl-tRNASec selenium transferase activity
FY155_15690	COG3964	amidohydrolase
FY155_15700	COG0601	transmembrane transport
FY155_15705	COG0747	negative chemotaxis
FY155_15710	COG0438	transferase activity, transferring glycosyl groups
FY155_15745	COG4989	oxidoreductase activity
FY155_15755	COG2188	Transcriptional regulator
FY155_15760	COG3842	ATPase activity
FY155_15765	COG1653	transport
FY155_15770	COG1175	transmembrane transport
FY155_15775	COG0395	ABC-type sugar transport system, permease component
FY155_15780	COG1501	Belongs to the glycosyl hydrolase 31 family
FY155_15790	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_15795	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY155_15800	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FY155_15805	COG0352	thiamine-phosphate diphosphorylase activity
FY155_15810	COG0351	phosphomethylpyrimidine kinase
FY155_15815	COG1522	sequence-specific DNA binding
FY155_15820	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FY155_15825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_15840	COG2204	response regulator
FY155_15845	COG4191	Histidine kinase
FY155_15850	COG1301	dicarboxylic acid transport
FY155_15855	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY155_15860	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_15870	COG1473	amidohydrolase
FY155_15890	COG1215	transferase activity, transferring glycosyl groups
FY155_15900	COG2942	2-epimerase
FY155_15925	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY155_15935	COG2197	response regulator
FY155_15965	COG3307	-O-antigen
FY155_15970	COG1596	polysaccharide export
FY155_15975	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FY155_15985	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY155_15990	COG2972	Histidine kinase
FY155_15990	COG0840	transmembrane signaling receptor activity
FY155_15995	COG1376	ErfK ybiS ycfS ynhG family protein
FY155_16005	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_16015	COG2094	Belongs to the DNA glycosylase MPG family
FY155_16030	COG1609	Transcriptional regulator
FY155_16035	COG1653	transport
FY155_16050	COG3842	ATPase activity
FY155_16060	COG0673	inositol 2-dehydrogenase activity
FY155_16065	COG0602	queuosine metabolic process
FY155_16070	COG0720	synthase
FY155_16075	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FY155_16080	COG0673	inositol 2-dehydrogenase activity
FY155_16095	COG0395	ABC-type sugar transport system, permease component
FY155_16100	COG1175	transmembrane transport
FY155_16125	COG0583	DNA-binding transcription factor activity
FY155_16130	COG0280	phosphate acetyltransferase
FY155_16130	COG0281	malic enzyme
FY155_16145	COG0765	amino acid transport
FY155_16150	COG1126	abc transporter atp-binding protein
FY155_16155	COG2079	MmgE PrpD family protein
FY155_16160	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16170	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_16185	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY155_16195	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FY155_16200	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FY155_16205	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_16210	COG1129	ABC transporter
FY155_16225	COG1473	amidohydrolase
FY155_16230	COG0747	negative chemotaxis
FY155_16245	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_16250	COG0601	transmembrane transport
FY155_16255	COG0583	DNA-binding transcription factor activity
FY155_16260	COG1446	asparaginase
FY155_16275	COG0747	negative chemotaxis
FY155_16295	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_16300	COG0601	transmembrane transport
FY155_16305	COG2197	response regulator
FY155_16310	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY155_16315	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY155_16325	COG3842	ATPase activity
FY155_16330	COG0395	ABC-type sugar transport system, permease component
FY155_16335	COG1175	transmembrane transport
FY155_16345	COG0673	inositol 2-dehydrogenase activity
FY155_16350	COG0673	inositol 2-dehydrogenase activity
FY155_16370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_16375	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY155_16395	COG1595	DNA-templated transcription, initiation
FY155_16400	COG1120	ATPase activity
FY155_16405	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_16420	COG2226	methyltransferase
FY155_16430	COG1120	ATPase activity
FY155_16435	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_16455	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY155_16480	COG1012	belongs to the aldehyde dehydrogenase family
FY155_16485	COG0473	3-isopropylmalate dehydrogenase activity
FY155_16490	COG1012	belongs to the aldehyde dehydrogenase family
FY155_16495	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_16530	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_16535	COG4172	Belongs to the ABC transporter superfamily
FY155_16540	COG1522	sequence-specific DNA binding
FY155_16550	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_16565	COG0583	DNA-binding transcription factor activity
FY155_16575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_16580	COG1126	abc transporter atp-binding protein
FY155_16590	COG1473	amidohydrolase
FY155_16595	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16600	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16605	COG1959	2 iron, 2 sulfur cluster binding
FY155_16615	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY155_16620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16650	COG1960	acyl-CoA dehydrogenase activity
FY155_16660	COG0747	negative chemotaxis
FY155_16675	COG0444	Belongs to the ABC transporter superfamily
FY155_16685	COG0667	Aldo Keto reductase
FY155_16695	COG0583	DNA-binding transcription factor activity
FY155_16700	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16705	COG4166	transmembrane transport
FY155_16715	COG0747	negative chemotaxis
FY155_16720	COG1473	amidohydrolase
FY155_16725	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16745	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_16765	COG4608	Belongs to the ABC transporter superfamily
FY155_16770	COG0444	Belongs to the ABC transporter superfamily
FY155_16780	COG0601	transmembrane transport
FY155_16790	COG2186	Transcriptional regulator
FY155_16805	COG0300	oxidoreductase activity
FY155_16815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY155_16815	COG3453	Protein conserved in bacteria
FY155_16820	COG0640	Transcriptional regulator
FY155_16830	COG2391	methyltransferase activity
FY155_16835	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FY155_16845	COG0022	dehydrogenase e1 component
FY155_16855	COG1960	acyl-CoA dehydrogenase activity
FY155_16860	COG0183	Belongs to the thiolase family
FY155_16870	COG1960	acyl-CoA dehydrogenase activity
FY155_16875	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FY155_16895	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FY155_16900	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FY155_16905	COG4952	isomerase
FY155_16910	COG3347	Dehydrogenase
FY155_16910	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_16915	COG1349	DNA-binding transcription factor activity
FY155_16925	COG1129	ABC transporter
FY155_16930	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_16935	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_16940	COG3254	rhamnose metabolic process
FY155_16955	COG2264	protein methyltransferase activity
FY155_16960	COG5001	Diguanylate cyclase
FY155_16975	COG4335	DNA alkylation repair
FY155_16980	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY155_16985	COG4208	sulfate ABC transporter
FY155_16995	COG4150	thiosulfate binding
FY155_17000	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FY155_17015	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY155_17025	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY155_17035	COG1040	competence protein
FY155_17040	COG2226	methyltransferase
FY155_17055	COG0494	nUDIX hydrolase
FY155_17065	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FY155_17070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FY155_17075	COG0653	protein targeting
FY155_17080	COG0697	spore germination
FY155_17145	COG2244	polysaccharide biosynthetic process
FY155_17160	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FY155_17170	COG3206	protein involved in exopolysaccharide biosynthesis
FY155_17170	COG0489	protein tyrosine kinase activity
FY155_17185	COG0438	transferase activity, transferring glycosyl groups
FY155_17190	COG0438	transferase activity, transferring glycosyl groups
FY155_17195	COG0438	transferase activity, transferring glycosyl groups
FY155_17210	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FY155_17215	COG2273	Hydrolase Family 16
FY155_17215	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
FY155_17230	COG3842	ATPase activity
FY155_17235	COG3833	ABC-type maltose transport systems, permease component
FY155_17290	COG1396	sequence-specific DNA binding
FY155_17300	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FY155_17305	COG1129	ABC transporter
FY155_17310	COG4214	carbohydrate transport
FY155_17315	COG4213	ABC transporter substrate-binding protein
FY155_17330	COG0346	lactoylglutathione lyase activity
FY155_17335	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FY155_17335	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FY155_17340	COG4770	biotin carboxylase activity
FY155_17355	COG0625	glutathione transferase activity
FY155_17360	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FY155_17365	COG1396	sequence-specific DNA binding
FY155_17365	COG3800	Transcriptional regulator
FY155_17375	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FY155_17385	COG0300	oxidoreductase activity
FY155_17395	COG2096	Adenosyltransferase
FY155_17405	COG2086	electron transfer activity
FY155_17415	COG1250	3-hydroxyacyl-CoA dehydrogenase
FY155_17425	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FY155_17430	COG0165	Argininosuccinate lyase
FY155_17465	COG2884	Cell division ATP-binding protein ftsE
FY155_17485	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FY155_17495	COG0287	Prephenate dehydrogenase
FY155_17500	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FY155_17505	COG2226	methyltransferase
FY155_17510	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY155_17530	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FY155_17535	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FY155_17575	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FY155_17580	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FY155_17590	COG4974	Belongs to the 'phage' integrase family
FY155_17595	COG0825	malonyl-CoA metabolic process
FY155_17600	COG3034	peptidoglycan biosynthetic process
FY155_17605	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FY155_17605	COG0425	Belongs to the sulfur carrier protein TusA family
FY155_17610	COG0523	cobalamin synthesis protein
FY155_17615	COG1686	Belongs to the peptidase S11 family
FY155_17620	COG1473	amidohydrolase
FY155_17630	COG4953	penicillin-binding protein 1C
FY155_17635	COG2373	Large extracellular alpha-helical protein
FY155_17640	COG2835	tetraacyldisaccharide 4'-kinase activity
FY155_17670	COG0482	sulfurtransferase activity
FY155_17685	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY155_17700	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FY155_17705	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FY155_17710	COG0037	tRNA processing
FY155_17720	COG2885	chlorophyll binding
FY155_17725	COG0823	Involved in the tonB-independent uptake of proteins
FY155_17745	COG0824	Thioesterase
FY155_17755	COG0494	nUDIX hydrolase
FY155_17770	COG2255	four-way junction helicase activity
FY155_17775	COG0632	four-way junction helicase activity
FY155_17780	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FY155_17785	COG0840	transmembrane signaling receptor activity
FY155_17790	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_17795	COG0217	transcriptional regulatory protein
FY155_17810	COG1692	metallophosphoesterase
FY155_17820	COG1253	flavin adenine dinucleotide binding
FY155_17860	COG0126	phosphoglycerate kinase activity
FY155_17865	COG3588	fructose-bisphosphate aldolase
FY155_17885	COG0254	rRNA binding
FY155_17890	COG1132	(ABC) transporter
FY155_17910	COG0483	inositol monophosphate 1-phosphatase activity
FY155_17940	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FY155_17945	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FY155_17950	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FY155_17955	COG0457	Tetratricopeptide repeat
FY155_17960	COG3750	Belongs to the UPF0335 family
FY155_17980	COG0469	pyruvate kinase activity
FY155_17985	COG3108	Peptidase M15
FY155_17990	COG2204	response regulator
FY155_17995	COG1164	Oligoendopeptidase f
FY155_18000	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY155_18010	COG5310	Homospermidine synthase
FY155_18020	COG0737	Belongs to the 5'-nucleotidase family
FY155_18025	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FY155_18030	COG0330	HflC and HflK could
FY155_18060	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FY155_18065	COG2951	lytic endotransglycosylase activity
FY155_18080	COG2205	protein histidine kinase activity
FY155_18095	COG0070	glutamate synthase
FY155_18095	COG0067	glutamate synthase
FY155_18095	COG0069	glutamate synthase activity
FY155_18110	COG2205	protein histidine kinase activity
FY155_18115	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FY155_18120	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FY155_18125	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FY155_18135	COG0252	asparaginase activity
FY155_18145	COG1027	Aspartate ammonia-lyase
FY155_18150	COG2186	Transcriptional regulator
FY155_18170	COG1309	transcriptional regulator
FY155_18190	COG4176	ABC-type proline glycine betaine transport system permease component
FY155_18195	COG0517	IMP dehydrogenase activity
FY155_18195	COG4175	Glycine betaine
FY155_18200	COG2986	histidine ammonia-lyase
FY155_18205	COG1609	Transcriptional regulator
FY155_18225	COG1082	Xylose isomerase domain protein TIM barrel
FY155_18230	COG0673	inositol 2-dehydrogenase activity
FY155_18235	COG1082	Xylose isomerase domain protein TIM barrel
FY155_18260	COG3550	peptidyl-serine autophosphorylation
FY155_18310	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FY155_18325	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FY155_18350	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_18360	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_18365	COG0601	transmembrane transport
FY155_18370	COG0747	negative chemotaxis
FY155_18380	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY155_18385	COG1454	alcohol dehydrogenase
FY155_18425	COG2308	Evidence 4 Homologs of previously reported genes of
FY155_18425	COG2307	Protein conserved in bacteria
FY155_18440	COG0488	(ABC) transporter
FY155_18445	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY155_18450	COG2186	Transcriptional regulator
FY155_18465	COG1175	transmembrane transport
FY155_18470	COG0395	ABC-type sugar transport system, permease component
FY155_18480	COG3842	ATPase activity
FY155_18505	COG1304	FMN binding
FY155_18520	COG1063	alcohol dehydrogenase
FY155_18525	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY155_18530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_18540	COG0765	amino acid transport
FY155_18545	COG0765	amino acid transport
FY155_18550	COG4221	oxidoreductase activity
FY155_18555	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY155_18560	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_18565	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY155_18580	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY155_18595	COG0697	spore germination
FY155_18600	COG0697	spore germination
FY155_18605	COG0511	ligase activity, forming carbon-carbon bonds
FY155_18610	COG0439	Biotin carboxylase
FY155_18620	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FY155_18625	COG1984	allophanate hydrolase subunit 2
FY155_18630	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FY155_18635	COG3842	ATPase activity
FY155_18645	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY155_18655	COG0436	Aminotransferase
FY155_18670	COG0840	transmembrane signaling receptor activity
FY155_18670	COG2972	Histidine kinase
FY155_18675	COG1070	Carbohydrate kinase
FY155_18680	COG1830	Aldolase
FY155_18685	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FY155_18690	COG0667	Aldo Keto reductase
FY155_18700	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_18705	COG1129	ABC transporter
FY155_18710	COG1879	ABC-type sugar transport system periplasmic component
FY155_18745	COG0071	Belongs to the small heat shock protein (HSP20) family
FY155_18760	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FY155_18775	COG0395	ABC-type sugar transport system, permease component
FY155_18790	COG3842	ATPase activity
FY155_18805	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FY155_18805	COG1648	precorrin-2 dehydrogenase activity
FY155_18810	COG0243	molybdopterin cofactor binding
FY155_18820	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FY155_18825	COG1116	anion transmembrane transporter activity
FY155_18830	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_18835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY155_18845	COG3707	response regulator
FY155_18850	COG1802	Transcriptional regulator
FY155_18855	COG1914	H( )-stimulated, divalent metal cation uptake system
FY155_18860	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FY155_18865	COG4336	lyase activity
FY155_18870	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FY155_18875	COG4770	biotin carboxylase activity
FY155_18880	COG0366	Alpha amylase catalytic
FY155_18890	COG4771	TonB-dependent receptor
FY155_18895	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY155_18915	COG1414	Transcriptional regulator
FY155_18920	COG1475	DNA binding
FY155_18925	COG1192	Involved in chromosome partitioning
FY155_18955	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FY155_18965	COG2986	histidine ammonia-lyase
FY155_18970	COG1228	amidohydrolase
FY155_18975	COG0402	S-adenosylhomocysteine deaminase activity
FY155_19015	COG4172	Belongs to the ABC transporter superfamily
FY155_19020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_19025	COG0601	transmembrane transport
FY155_19030	COG4166	transmembrane transport
FY155_19035	COG0395	ABC-type sugar transport system, permease component
FY155_19050	COG1566	PFAM secretion protein HlyD family protein
FY155_19065	COG2207	Transcriptional regulator
FY155_19070	COG1309	transcriptional regulator
FY155_19075	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_19100	COG1846	Transcriptional regulator
FY155_19105	COG0583	DNA-binding transcription factor activity
FY155_19110	COG2828	Protein conserved in bacteria
FY155_19125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_19140	COG0840	transmembrane signaling receptor activity
FY155_19160	COG1215	transferase activity, transferring glycosyl groups
FY155_19190	COG0583	DNA-binding transcription factor activity
FY155_19195	COG0346	lactoylglutathione lyase activity
FY155_19210	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FY155_19230	COG0583	DNA-binding transcription factor activity
FY155_19235	COG0477	Major facilitator Superfamily
FY155_19245	COG2205	protein histidine kinase activity
FY155_19250	COG0745	RESPONSE REGULATOR receiver
FY155_19255	COG0671	phosphoesterase, PA-phosphatase related
FY155_19305	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FY155_19310	COG0156	8-amino-7-oxononanoate synthase activity
FY155_19315	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FY155_19320	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY155_19325	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FY155_19340	COG0010	Belongs to the arginase family
FY155_19350	COG0697	spore germination
FY155_19355	COG0673	inositol 2-dehydrogenase activity
FY155_19380	COG0477	Major facilitator Superfamily
FY155_19395	COG2194	sulfuric ester hydrolase activity
FY155_19405	COG0583	DNA-binding transcription factor activity
FY155_19410	COG4774	siderophore transport
FY155_19425	COG1120	ATPase activity
FY155_19435	COG3474	cytochrome
FY155_19440	COG2137	regulation of response to DNA damage stimulus
FY155_19445	COG3386	PFAM SMP-30 Gluconolaconase
FY155_19455	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_19460	COG1129	ABC transporter
FY155_19465	COG1879	ABC-type sugar transport system periplasmic component
FY155_19470	COG4585	Histidine kinase
FY155_19475	COG2197	response regulator
FY155_19485	COG2133	pyrroloquinoline quinone binding
FY155_19495	COG0500	methyltransferase
FY155_19500	COG0564	pseudouridine synthase activity
FY155_19515	COG3448	diguanylate cyclase activity
FY155_19515	COG4175	Glycine betaine
FY155_19520	COG4176	ABC-type proline glycine betaine transport system permease component
FY155_19535	COG4191	Histidine kinase
FY155_19535	COG0784	Response regulator, receiver
FY155_19540	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY155_19545	COG0489	protein tyrosine kinase activity
FY155_19545	COG3206	protein involved in exopolysaccharide biosynthesis
FY155_19550	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FY155_19555	COG1215	transferase activity, transferring glycosyl groups
FY155_19560	COG1215	transferase activity, transferring glycosyl groups
FY155_19565	COG1215	transferase activity, transferring glycosyl groups
FY155_19570	COG0438	transferase activity, transferring glycosyl groups
FY155_19575	COG2273	Hydrolase Family 16
FY155_19580	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FY155_19585	COG2244	polysaccharide biosynthetic process
FY155_19590	COG0463	Glycosyl transferase, family 2
FY155_19595	COG2327	Polysaccharide pyruvyl transferase
FY155_19600	COG1215	transferase activity, transferring glycosyl groups
FY155_19620	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FY155_19625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_19640	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY155_19640	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY155_19670	COG1523	belongs to the glycosyl hydrolase 13 family
FY155_19675	COG0033	Phosphoglucomutase
FY155_19680	COG0297	glycogen (starch) synthase activity
FY155_19685	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FY155_19690	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FY155_19695	COG0058	SHG alpha-glucan phosphorylase activity
FY155_19710	COG1794	racemase activity, acting on amino acids and derivatives
FY155_19715	COG1522	sequence-specific DNA binding
FY155_19725	COG2084	Dehydrogenase
FY155_19730	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_19735	COG1063	alcohol dehydrogenase
FY155_19745	COG4988	ABC transporter
FY155_19750	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FY155_19760	COG1294	oxidase, subunit
FY155_19790	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FY155_19795	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FY155_19825	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FY155_19830	COG0539	negative regulation of cytoplasmic translation
FY155_19860	COG4221	oxidoreductase activity
FY155_19870	COG0747	negative chemotaxis
FY155_19875	COG0601	transmembrane transport
FY155_19880	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_19885	COG0444	Belongs to the ABC transporter superfamily
FY155_19890	COG4608	Belongs to the ABC transporter superfamily
FY155_19895	COG0246	Mannitol dehydrogenase
FY155_19910	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_19955	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FY155_19960	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_19975	COG4993	Dehydrogenase
FY155_19980	COG3685	Protein conserved in bacteria
FY155_20010	COG0693	protein deglycase activity
FY155_20030	COG0189	ligase activity
FY155_20035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY155_20040	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FY155_20055	COG0435	Glutathione S-transferase
FY155_20060	COG0583	DNA-binding transcription factor activity
FY155_20065	COG1012	belongs to the aldehyde dehydrogenase family
FY155_20070	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY155_20075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY155_20080	COG1116	anion transmembrane transporter activity
FY155_20090	COG1522	sequence-specific DNA binding
FY155_20105	COG0784	Response regulator, receiver
FY155_20125	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FY155_20140	COG0019	diaminopimelate decarboxylase activity
FY155_20155	COG0527	aspartate kinase activity
FY155_20165	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FY155_20170	COG2890	protein-(glutamine-N5) methyltransferase activity
FY155_20180	COG0542	response to heat
FY155_20185	COG1196	nuclear chromosome segregation
FY155_20185	COG0741	lytic transglycosylase activity
FY155_20185	COG0739	heme binding
FY155_20225	COG2376	Dihydroxyacetone kinase
FY155_20230	COG1522	sequence-specific DNA binding
FY155_20250	COG0431	NADPH-dependent FMN reductase
FY155_20260	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_20270	COG4172	Belongs to the ABC transporter superfamily
FY155_20275	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_20295	COG0277	FAD linked oxidase domain protein
FY155_20315	COG0778	Nitroreductase
FY155_20345	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY155_20370	COG2318	DinB family
FY155_20375	COG0583	DNA-binding transcription factor activity
FY155_20390	COG1335	isochorismatase
FY155_20415	COG3842	ATPase activity
FY155_20420	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY155_20425	COG1177	transmembrane transport
FY155_20430	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FY155_20440	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FY155_20455	COG1120	ATPase activity
FY155_20460	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_20465	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_20470	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FY155_20475	COG1629	transport
FY155_20475	COG4774	siderophore transport
FY155_20480	COG4702	Belongs to the UPF0303 family
FY155_20500	COG1024	Enoyl-CoA hydratase
FY155_20505	COG1012	belongs to the aldehyde dehydrogenase family
FY155_20510	COG1653	transport
FY155_20515	COG1175	transmembrane transport
FY155_20520	COG0395	ABC-type sugar transport system, permease component
FY155_20525	COG3842	ATPase activity
FY155_20550	COG3474	cytochrome
FY155_20555	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FY155_20560	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY155_20565	COG1845	cytochrome c oxidase, subunit III
FY155_20590	COG0577	efflux transmembrane transporter activity
FY155_20590	COG1136	(ABC) transporter
FY155_20645	COG3842	ATPase activity
FY155_20655	COG1177	transmembrane transport
FY155_20660	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY155_20675	COG1940	carbohydrate kinase activity
FY155_20695	COG1069	ribulokinase activity
FY155_20700	COG1349	DNA-binding transcription factor activity
FY155_20705	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_20730	COG0395	ABC-type sugar transport system, permease component
FY155_20740	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_20755	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FY155_20760	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FY155_20770	COG0477	Major facilitator Superfamily
FY155_20810	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FY155_20820	COG1733	regulation of RNA biosynthetic process
FY155_20855	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FY155_20860	COG3938	Belongs to the proline racemase family
FY155_20865	COG4176	ABC-type proline glycine betaine transport system permease component
FY155_20870	COG4176	ABC-type proline glycine betaine transport system permease component
FY155_20875	COG4175	Glycine betaine
FY155_20875	COG3448	diguanylate cyclase activity
FY155_20885	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_20890	COG1012	belongs to the aldehyde dehydrogenase family
FY155_20895	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_20905	COG0047	phosphoribosylformylglycinamidine synthase activity
FY155_20910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_20920	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY155_20920	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY155_20930	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FY155_20950	COG1309	transcriptional regulator
FY155_20965	COG1136	(ABC) transporter
FY155_20980	COG1063	alcohol dehydrogenase
FY155_20990	COG1879	ABC-type sugar transport system periplasmic component
FY155_21000	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_21020	COG0477	Major facilitator Superfamily
FY155_21160	COG5001	Diguanylate cyclase
FY155_21160	COG3300	MHYT domain
FY155_21185	COG1253	flavin adenine dinucleotide binding
FY155_21200	COG3842	ATPase activity
FY155_21205	COG0395	ABC-type sugar transport system, permease component
FY155_21210	COG1175	transmembrane transport
FY155_21215	COG1653	transport
FY155_21225	COG0673	inositol 2-dehydrogenase activity
FY155_21230	COG1609	Transcriptional regulator
FY155_21245	COG0583	DNA-binding transcription factor activity
FY155_21255	COG1879	ABC-type sugar transport system periplasmic component
FY155_21260	COG1129	ABC transporter
FY155_21265	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_21270	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_21275	COG1609	Transcriptional regulator
FY155_21285	COG0673	inositol 2-dehydrogenase activity
FY155_21345	COG0714	Associated with various cellular activities
FY155_21350	COG3256	nitric oxide reductase
FY155_21380	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FY155_21385	COG3189	MarR family transcriptional regulator
FY155_21395	COG0826	peptidase U32
FY155_21420	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FY155_21430	COG4459	periplasmic nitrate reductase
FY155_21445	COG0243	molybdopterin cofactor binding
FY155_21455	COG3005	denitrification pathway
FY155_21460	COG0583	DNA-binding transcription factor activity
FY155_21470	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY155_21475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_21490	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_21495	COG1535	isochorismatase
FY155_21495	COG3433	isochorismatase activity
FY155_21500	COG1021	2,3-dihydroxybenzoate-AMP ligase
FY155_21505	COG1169	isochorismate synthase
FY155_21515	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FY155_21515	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FY155_21520	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FY155_21530	COG2375	cellular response to nickel ion
FY155_21540	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_21545	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_21555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_21565	COG1629	transport
FY155_21565	COG4774	siderophore transport
FY155_21570	COG1960	acyl-CoA dehydrogenase activity
FY155_21575	COG0583	DNA-binding transcription factor activity
FY155_21580	COG1609	Transcriptional regulator
FY155_21590	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY155_21600	COG3842	ATPase activity
FY155_21610	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FY155_21615	COG0583	DNA-binding transcription factor activity
FY155_21620	COG2814	Major facilitator Superfamily
FY155_21625	COG1473	amidohydrolase
FY155_21630	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FY155_21640	COG0747	negative chemotaxis
FY155_21645	COG0601	transmembrane transport
FY155_21650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_21655	COG0444	Belongs to the ABC transporter superfamily
FY155_21660	COG4608	Belongs to the ABC transporter superfamily
FY155_21665	COG0583	DNA-binding transcription factor activity
FY155_21670	COG0747	negative chemotaxis
FY155_21675	COG0601	transmembrane transport
FY155_21680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_21685	COG0154	amidase activity
FY155_21690	COG0693	protein deglycase activity
FY155_21700	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_21705	COG0601	transmembrane transport
FY155_21715	COG1473	amidohydrolase
FY155_21720	COG4172	Belongs to the ABC transporter superfamily
FY155_21725	COG2390	Transcriptional regulator
FY155_21735	COG1175	transmembrane transport
FY155_21740	COG0395	ABC-type sugar transport system, permease component
FY155_21765	COG1069	ribulokinase activity
FY155_21790	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY155_21800	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FY155_21805	COG1414	Transcriptional regulator
FY155_21810	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_21820	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY155_21825	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY155_21830	COG1121	(ABC) transporter
FY155_21835	COG0803	Belongs to the bacterial solute-binding protein 9 family
FY155_21845	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY155_21850	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FY155_21855	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FY155_21860	COG0471	metal ion transport
FY155_21860	COG3273	potassium ion transport
FY155_21865	COG1253	flavin adenine dinucleotide binding
FY155_21870	COG1309	transcriptional regulator
FY155_21890	COG1609	Transcriptional regulator
FY155_21895	COG1070	Carbohydrate kinase
FY155_21900	COG2115	Belongs to the xylose isomerase family
FY155_21910	COG0778	Nitroreductase
FY155_21915	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FY155_21920	COG2011	ABC-type metal ion transport system permease component
FY155_21930	COG5001	Diguanylate cyclase
FY155_21930	COG3300	MHYT domain
FY155_21935	COG1054	Belongs to the UPF0176 family
FY155_21945	COG2954	triphosphatase activity
FY155_21950	COG0800	Aldolase
FY155_21970	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FY155_22005	COG0523	cobalamin synthesis protein
FY155_22015	COG1846	Transcriptional regulator
FY155_22020	COG1609	Transcriptional regulator
FY155_22025	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY155_22035	COG3718	enzyme involved in inositol metabolism
FY155_22045	COG3962	Belongs to the TPP enzyme family
FY155_22050	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_22065	COG0411	ABC transporter
FY155_22080	COG0683	leucine binding
FY155_22095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_22105	COG0747	negative chemotaxis
FY155_22110	COG4172	Belongs to the ABC transporter superfamily
FY155_22130	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FY155_22135	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FY155_22140	COG1126	abc transporter atp-binding protein
FY155_22145	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_22150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_22155	COG0765	amino acid transport
FY155_22160	COG0765	amino acid transport
FY155_22165	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FY155_22170	COG3485	protocatechuate 3,4-dioxygenase
FY155_22175	COG3485	protocatechuate 3,4-dioxygenase
FY155_22180	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FY155_22190	COG0583	DNA-binding transcription factor activity
FY155_22205	COG1414	Transcriptional regulator
FY155_22215	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FY155_22220	COG0183	Belongs to the thiolase family
FY155_22225	COG1609	Transcriptional regulator
FY155_22240	COG1082	Xylose isomerase domain protein TIM barrel
FY155_22245	COG0673	inositol 2-dehydrogenase activity
FY155_22255	COG1609	Transcriptional regulator
FY155_22260	COG0395	ABC-type sugar transport system, permease component
FY155_22265	COG1175	transmembrane transport
FY155_22270	COG3842	ATPase activity
FY155_22280	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FY155_22300	COG2814	Major facilitator Superfamily
FY155_22305	COG4774	siderophore transport
FY155_22310	COG3712	iron ion homeostasis
FY155_22320	COG1940	carbohydrate kinase activity
FY155_22325	COG0584	glycerophosphoryl diester phosphodiesterase
FY155_22330	COG0300	oxidoreductase activity
FY155_22345	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FY155_22365	COG0667	Aldo Keto reductase
FY155_22370	COG0583	DNA-binding transcription factor activity
FY155_22380	COG1132	(ABC) transporter
FY155_22385	COG0275	rRNA processing
FY155_22395	COG0673	inositol 2-dehydrogenase activity
FY155_22420	COG3754	Rhamnan synthesis protein F
FY155_22435	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FY155_22440	COG1091	dTDP-4-dehydrorhamnose reductase activity
FY155_22445	COG1088	dTDP-glucose 4,6-dehydratase activity
FY155_22450	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
FY155_22455	COG0210	DNA helicase
FY155_22465	COG1609	Transcriptional regulator
FY155_22470	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY155_22470	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY155_22485	COG0395	ABC-type sugar transport system, permease component
FY155_22490	COG3842	ATPase activity
FY155_22500	COG0444	Belongs to the ABC transporter superfamily
FY155_22505	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_22510	COG0601	transmembrane transport
FY155_22515	COG2186	Transcriptional regulator
FY155_22535	COG3300	MHYT domain
FY155_22535	COG5001	Diguanylate cyclase
FY155_22540	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_22550	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FY155_22560	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FY155_22565	COG0306	phosphate transporter
FY155_22570	COG1392	Phosphate transport regulator
FY155_22585	COG1566	PFAM secretion protein HlyD family protein
FY155_22590	COG0745	RESPONSE REGULATOR receiver
FY155_22595	COG2205	protein histidine kinase activity
FY155_22610	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FY155_22620	COG4774	siderophore transport
FY155_22630	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_22635	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_22640	COG1120	ATPase activity
FY155_22645	COG0583	DNA-binding transcription factor activity
FY155_22655	COG3119	arylsulfatase activity
FY155_22660	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY155_22665	COG3842	ATPase activity
FY155_22670	COG0165	Argininosuccinate lyase
FY155_22675	COG0395	ABC-type sugar transport system, permease component
FY155_22680	COG1175	transmembrane transport
FY155_22685	COG2182	Extracellular solute-binding protein
FY155_22690	COG1940	carbohydrate kinase activity
FY155_22715	COG1486	melibiose metabolic process
FY155_22720	COG0747	negative chemotaxis
FY155_22725	COG0601	transmembrane transport
FY155_22730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_22735	COG4172	Belongs to the ABC transporter superfamily
FY155_22740	COG1486	melibiose metabolic process
FY155_22745	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY155_22750	COG0842	Transport permease protein
FY155_22750	COG1129	ABC transporter
FY155_22755	COG0842	Transport permease protein
FY155_22770	COG0784	Response regulator, receiver
FY155_22775	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY155_22785	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_22790	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY155_22805	COG0765	amino acid transport
FY155_22815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY155_22825	COG3938	Belongs to the proline racemase family
FY155_22840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_22845	COG0765	amino acid transport
FY155_22850	COG0765	amino acid transport
FY155_22860	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY155_22875	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY155_22895	COG3383	formate dehydrogenase (NAD+) activity
FY155_22905	COG2223	nitrite transmembrane transporter activity
FY155_22910	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY155_22920	COG2186	Transcriptional regulator
FY155_22925	COG0747	negative chemotaxis
FY155_22930	COG0601	transmembrane transport
FY155_22935	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_22940	COG4172	Belongs to the ABC transporter superfamily
FY155_22945	COG4948	Mandelate Racemase Muconate Lactonizing
FY155_22955	COG2186	Transcriptional regulator
FY155_22960	COG0747	negative chemotaxis
FY155_22965	COG0601	transmembrane transport
FY155_22970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_22975	COG0405	Gamma-glutamyltransferase
FY155_22985	COG0483	inositol monophosphate 1-phosphatase activity
FY155_22995	COG3842	ATPase activity
FY155_23000	COG0395	ABC-type sugar transport system, permease component
FY155_23020	COG3237	CsbD-like
FY155_23030	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FY155_23035	COG3181	Tripartite tricarboxylate transporter family receptor
FY155_23040	COG5265	(ABC) transporter
FY155_23045	COG0488	(ABC) transporter
FY155_23070	COG1049	propionate catabolic process, 2-methylcitrate cycle
FY155_23075	COG0110	maltose O-acetyltransferase activity
FY155_23085	COG1063	alcohol dehydrogenase
FY155_23090	COG3284	Transcriptional regulator
FY155_23110	COG1129	ABC transporter
FY155_23115	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_23120	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_23130	COG0572	uridine kinase
FY155_23135	COG1082	Xylose isomerase domain protein TIM barrel
FY155_23160	COG4178	(ABC) transporter
FY155_23195	COG0640	Transcriptional regulator
FY155_23210	COG2274	protein secretion by the type I secretion system
FY155_23225	COG1192	Involved in chromosome partitioning
FY155_23230	COG1475	DNA binding
FY155_23235	COG0640	Transcriptional regulator
FY155_23250	COG1126	abc transporter atp-binding protein
FY155_23255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY155_23260	COG1609	Transcriptional regulator
FY155_23295	COG3239	Fatty acid desaturase
FY155_23305	COG1278	Cold shock
FY155_23380	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FY155_23380	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY155_23415	COG4191	Histidine kinase
FY155_23420	COG1132	(ABC) transporter
FY155_23430	COG0640	Transcriptional regulator
FY155_23460	COG4977	sequence-specific DNA binding
FY155_23465	COG2211	Major facilitator Superfamily
FY155_23470	COG2807	transmembrane transport
FY155_23475	COG1846	Transcriptional regulator
FY155_23490	COG2814	Major facilitator Superfamily
FY155_23520	COG3443	Belongs to the bacterial solute-binding protein 9 family
FY155_23535	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FY155_23540	COG0583	DNA-binding transcription factor activity
FY155_23555	COG0071	Belongs to the small heat shock protein (HSP20) family
FY155_23600	COG3838	Conjugal transfer protein Trbc
FY155_23605	COG3702	type iv secretory pathway
FY155_23610	COG3451	type IV secretory pathway VirB4
FY155_23625	COG3704	protein secretion by the type IV secretion system
FY155_23635	COG3736	Type IV secretory pathway, component VirB8
FY155_23640	COG3504	Conjugal transfer protein
FY155_23645	COG2948	multi-organism process
FY155_23650	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
FY155_23750	COG3831	ATPase activity
FY155_23765	COG3505	Type IV secretory pathway VirD4
FY155_23785	COG0583	DNA-binding transcription factor activity
FY155_23825	COG0745	RESPONSE REGULATOR receiver
FY155_23865	COG3842	ATPase activity
FY155_23870	COG4208	sulfate ABC transporter
FY155_23875	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY155_23895	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FY155_23900	COG1942	4-Oxalocrotonate Tautomerase
FY155_23910	COG3971	2-oxopent-4-enoate hydratase activity
FY155_23920	COG1414	Transcriptional regulator
FY155_23930	COG1137	ATPase activity
FY155_23945	COG4177	L-phenylalanine transmembrane transporter activity
FY155_23965	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FY155_23970	COG1175	transmembrane transport
FY155_23975	COG0395	ABC-type sugar transport system, permease component
FY155_23985	COG0366	Alpha amylase catalytic
FY155_23990	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY155_23995	COG1082	Xylose isomerase domain protein TIM barrel
FY155_24000	COG3842	ATPase activity
FY155_24010	COG1940	carbohydrate kinase activity
FY155_24015	COG0395	ABC-type sugar transport system, permease component
FY155_24025	COG2182	Extracellular solute-binding protein
FY155_24030	COG0673	inositol 2-dehydrogenase activity
FY155_24060	COG1126	abc transporter atp-binding protein
FY155_24065	COG0765	amino acid transport
FY155_24070	COG0765	amino acid transport
FY155_24080	COG4608	Belongs to the ABC transporter superfamily
FY155_24090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_24105	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY155_24110	COG0583	DNA-binding transcription factor activity
FY155_24115	COG2423	ornithine cyclodeaminase activity
FY155_24125	COG1957	nucleoside hydrolase
FY155_24145	COG1335	isochorismatase
FY155_24150	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_24195	COG0583	DNA-binding transcription factor activity
FY155_24200	COG1902	pentaerythritol trinitrate reductase activity
FY155_24205	COG0583	DNA-binding transcription factor activity
FY155_24210	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_24220	COG1335	isochorismatase
FY155_24225	COG0583	DNA-binding transcription factor activity
FY155_24235	COG1695	Transcriptional regulator
FY155_24315	COG2207	Transcriptional regulator
FY155_24360	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_24375	COG1802	Transcriptional regulator
FY155_24380	COG3485	protocatechuate 3,4-dioxygenase
FY155_24385	COG3971	2-oxopent-4-enoate hydratase activity
FY155_24400	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY155_24405	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FY155_24420	COG1063	alcohol dehydrogenase
FY155_24430	COG1960	acyl-CoA dehydrogenase activity
FY155_24435	COG1024	Enoyl-CoA hydratase
FY155_24445	COG1012	belongs to the aldehyde dehydrogenase family
FY155_24450	COG0477	Major facilitator Superfamily
FY155_24465	COG3706	GGDEF domain
FY155_24485	COG1846	Transcriptional regulator
FY155_24525	COG1012	belongs to the aldehyde dehydrogenase family
FY155_24535	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FY155_24545	COG3386	PFAM SMP-30 Gluconolaconase
FY155_24550	COG3622	Belongs to the hyi family
FY155_24555	COG2084	Dehydrogenase
FY155_24580	COG1940	carbohydrate kinase activity
FY155_24585	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY155_24595	COG1129	ABC transporter
FY155_24615	COG0583	DNA-binding transcription factor activity
FY155_24620	COG2271	Major facilitator Superfamily
FY155_24630	COG2272	Belongs to the type-B carboxylesterase lipase family
FY155_24650	COG1129	ABC transporter
FY155_24675	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY155_24685	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FY155_24720	COG0583	DNA-binding transcription factor activity
FY155_24725	COG1414	Transcriptional regulator
FY155_24735	COG4948	Mandelate Racemase Muconate Lactonizing
FY155_24745	COG3842	ATPase activity
FY155_24750	COG1175	transmembrane transport
FY155_24755	COG0395	ABC-type sugar transport system, permease component
FY155_24765	COG0477	Major facilitator Superfamily
FY155_24800	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FY155_24820	COG0747	negative chemotaxis
FY155_24830	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_24845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY155_24855	COG4215	(ABC) transporter
FY155_24910	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
FY155_24915	COG0251	oxidation-reduction process
FY155_24920	COG3547	Transposase (IS116 IS110 IS902 family)
FY155_24955	COG1028	Short-chain dehydrogenase reductase Sdr
FY155_24960	COG1335	isochorismatase
FY155_24970	COG1309	transcriptional regulator
FY155_24975	COG4604	ABC transporter, ATP-binding protein
FY155_24980	COG4605	iron ion homeostasis
FY155_24985	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY155_24995	COG2132	Multicopper oxidase
FY155_25000	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY155_25005	COG4771	TonB-dependent receptor
FY155_25040	COG1695	Transcriptional regulator
FY155_25075	COG2132	Multicopper oxidase
FY155_25110	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FY155_25130	COG1192	Involved in chromosome partitioning
FY155_25135	COG1475	DNA binding
FY155_25140	COG0640	Transcriptional regulator
FY155_25145	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FY155_25175	COG2211	Major facilitator Superfamily
FY155_25220	COG4974	Belongs to the 'phage' integrase family
FY155_25225	COG1051	belongs to the nudix hydrolase family
FY155_25265	COG1475	DNA binding
FY155_25290	COG2824	Alkylphosphonate utilization operon protein PhnA
FY155_25310	COG1280	lysine exporter protein (LysE YggA)
FY155_25375	COG5489	Protein of unknown function (DUF736)
FY155_25460	COG1283	sodium-dependent phosphate transmembrane transporter activity
FY155_25475	COG0747	negative chemotaxis
FY155_25495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_25500	COG0584	glycerophosphoryl diester phosphodiesterase
FY155_25505	COG0483	inositol monophosphate 1-phosphatase activity
FY155_25570	COG3161	chorismate lyase activity
FY155_25720	COG3436	PFAM IS66 Orf2 family protein
FY155_25815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY155_25845	COG0583	DNA-binding transcription factor activity
FY155_25850	COG0747	negative chemotaxis
FY155_25865	COG0252	asparaginase activity
FY155_25870	COG0583	DNA-binding transcription factor activity
FY155_25890	COG3842	ATPase activity
FY155_25915	COG3701	Conjugal transfer protein
FY155_25920	COG3846	protein secretion by the type IV secretion system
FY155_25930	COG5314	conjugation
FY155_25935	COG3451	type IV secretory pathway VirB4
FY155_25950	COG4962	Type ii secretion system protein e