locus-tag	class	description
FY156_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FY156_00010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FY156_00015	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FY156_00020	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FY156_00025	COG1420	regulation of RNA biosynthetic process
FY156_00030	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FY156_00035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY156_00040	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FY156_00050	COG1137	ATPase activity
FY156_00055	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FY156_00070	COG0776	regulation of translation
FY156_00085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FY156_00090	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FY156_00105	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FY156_00110	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FY156_00115	COG0728	peptidoglycan biosynthetic process
FY156_00120	COG0346	lactoylglutathione lyase activity
FY156_00125	COG0180	Tryptophanyl-tRNA synthetase
FY156_00135	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FY156_00140	COG1214	PFAM Peptidase M22, glycoprotease
FY156_00160	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FY156_00165	COG1702	phosphate starvation-inducible protein PhoH
FY156_00170	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FY156_00180	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FY156_00185	COG1396	sequence-specific DNA binding
FY156_00190	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FY156_00195	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FY156_00200	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY156_00210	COG0242	peptide deformylase activity
FY156_00215	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FY156_00220	COG0101	tRNA pseudouridine synthase activity
FY156_00230	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY156_00235	COG2171	N-acyltransferase activity
FY156_00245	COG0840	transmembrane signaling receptor activity
FY156_00280	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FY156_00290	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FY156_00295	COG0706	membrane insertase activity
FY156_00300	COG0594	ribonuclease P activity
FY156_00305	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FY156_00310	COG0840	transmembrane signaling receptor activity
FY156_00325	COG0427	acetyl-CoA hydrolase
FY156_00335	COG3938	Belongs to the proline racemase family
FY156_00340	COG0418	dihydroorotase activity
FY156_00345	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FY156_00355	COG0166	Belongs to the GPI family
FY156_00360	COG0318	PFAM AMP-dependent synthetase and ligase
FY156_00365	COG3842	ATPase activity
FY156_00370	COG1840	ABC-type Fe3 transport system, periplasmic component
FY156_00375	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY156_00380	COG4774	siderophore transport
FY156_00425	COG2326	polyphosphate kinase activity
FY156_00430	COG5002	protein histidine kinase activity
FY156_00435	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FY156_00440	COG0573	inorganic phosphate transmembrane transporter activity
FY156_00450	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FY156_00455	COG0704	Plays a role in the regulation of phosphate uptake
FY156_00460	COG0745	RESPONSE REGULATOR receiver
FY156_00470	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FY156_00475	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FY156_00485	COG2967	ApaG domain
FY156_00495	COG0717	Belongs to the dCTP deaminase family
FY156_00505	COG0582	viral genome integration into host DNA
FY156_00515	COG1396	sequence-specific DNA binding
FY156_00525	COG0840	transmembrane signaling receptor activity
FY156_00530	COG0583	DNA-binding transcription factor activity
FY156_00540	COG2814	Major facilitator Superfamily
FY156_00545	COG1309	transcriptional regulator
FY156_00585	COG0840	transmembrane signaling receptor activity
FY156_00650	COG0840	transmembrane signaling receptor activity
FY156_00655	COG2199	diguanylate cyclase activity
FY156_00655	COG2200	EAL domain
FY156_00655	COG2202	Pas domain
FY156_00665	COG3969	phosphoadenosine phosphosulfate
FY156_00675	COG1475	DNA binding
FY156_00745	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FY156_00760	COG0583	DNA-binding transcription factor activity
FY156_00805	COG2814	Major facilitator Superfamily
FY156_00815	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_00845	COG0604	alcohol dehydrogenase
FY156_00960	COG3093	addiction module antidote protein HigA
FY156_00985	COG4453	Protein conserved in bacteria
FY156_01015	COG0270	DNA (cytosine-5-)-methyltransferase activity
FY156_01065	COG2894	cell division
FY156_01075	COG0583	DNA-binding transcription factor activity
FY156_01090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_01095	COG0601	transmembrane transport
FY156_01100	COG0747	negative chemotaxis
FY156_01110	COG0583	DNA-binding transcription factor activity
FY156_01135	COG0167	dihydroorotate dehydrogenase activity
FY156_01170	COG1959	2 iron, 2 sulfur cluster binding
FY156_01175	COG1201	RNA secondary structure unwinding
FY156_01195	COG0730	response to heat
FY156_01205	COG1960	acyl-CoA dehydrogenase activity
FY156_01210	COG0183	Belongs to the thiolase family
FY156_01215	COG1250	3-hydroxyacyl-CoA dehydrogenase
FY156_01215	COG1024	Enoyl-CoA hydratase
FY156_01235	COG1320	monovalent cation:proton antiporter activity
FY156_01240	COG2212	antiporter activity
FY156_01245	COG1863	multisubunit Na H antiporter MnhE subunit
FY156_01250	COG0651	ATP synthesis coupled electron transport
FY156_01255	COG1006	Multisubunit Na H antiporter MnhC subunit
FY156_01260	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FY156_01260	COG2111	Na H antiporter
FY156_01270	COG0840	transmembrane signaling receptor activity
FY156_01280	COG0745	RESPONSE REGULATOR receiver
FY156_01285	COG2198	Histidine kinase
FY156_01285	COG0643	Histidine kinase
FY156_01290	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FY156_01295	COG2201	protein-glutamate methylesterase activity
FY156_01300	COG0745	RESPONSE REGULATOR receiver
FY156_01305	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FY156_01315	COG1766	The M ring may be actively involved in energy transduction
FY156_01320	COG2771	luxR family
FY156_01335	COG0784	Response regulator, receiver
FY156_01335	COG2198	Histidine kinase
FY156_01335	COG2205	protein histidine kinase activity
FY156_01340	COG1970	mechanosensitive ion channel activity
FY156_01345	COG0436	Aminotransferase
FY156_01360	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FY156_01365	COG0424	maF-like protein
FY156_01370	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FY156_01380	COG5328	Belongs to the UPF0262 family
FY156_01385	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FY156_01395	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FY156_01425	COG1338	Plays a role in the flagellum-specific transport system
FY156_01435	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FY156_01445	COG1706	bacterial-type flagellum-dependent cell motility
FY156_01450	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FY156_01455	COG4786	Flagellar basal body rod
FY156_01460	COG1677	Flagellar hook-basal body complex protein FliE
FY156_01465	COG1558	bacterial-type flagellum-dependent cell motility
FY156_01470	COG1815	bacterial-type flagellum-dependent cell motility
FY156_01480	COG1157	protein secretion by the type III secretion system
FY156_01485	COG4786	Flagellar basal body rod
FY156_01495	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FY156_01500	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY156_01505	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY156_01510	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY156_01515	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FY156_01525	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FY156_01535	COG1360	Flagellar Motor Protein
FY156_01580	COG5443	negative regulation of bacterial-type flagellum assembly
FY156_01585	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FY156_01595	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FY156_01610	COG3951	Flagellar rod assembly protein muramidase FlgJ
FY156_01635	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FY156_01640	COG1609	Transcriptional regulator
FY156_01645	COG1653	transport
FY156_01650	COG1175	transmembrane transport
FY156_01655	COG0395	ABC-type sugar transport system, permease component
FY156_01660	COG0366	Alpha amylase catalytic
FY156_01665	COG3842	ATPase activity
FY156_01680	COG0129	dihydroxy-acid dehydratase activity
FY156_01685	COG0363	glucosamine-6-phosphate deaminase activity
FY156_01690	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FY156_01695	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_01705	COG2081	HI0933 family
FY156_01725	COG2224	Isocitrate lyase
FY156_01735	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FY156_01740	COG3842	ATPase activity
FY156_01745	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY156_01750	COG1177	transmembrane transport
FY156_01755	COG4208	sulfate ABC transporter
FY156_01760	COG2205	protein histidine kinase activity
FY156_01770	COG0248	Ppx GppA phosphatase
FY156_01775	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FY156_01780	COG0477	Major facilitator Superfamily
FY156_01805	COG0412	Dienelactone hydrolase
FY156_01810	COG0583	DNA-binding transcription factor activity
FY156_01830	COG0306	phosphate transporter
FY156_01840	COG0561	phosphatase activity
FY156_01845	COG0438	transferase activity, transferring glycosyl groups
FY156_01850	COG2186	Transcriptional regulator
FY156_01860	COG0583	DNA-binding transcription factor activity
FY156_01865	COG0277	FAD linked oxidase domain protein
FY156_01870	COG0277	FAD linked oxidase domain protein
FY156_01875	COG0247	lactate metabolic process
FY156_01880	COG1376	ErfK ybiS ycfS ynhG family protein
FY156_01885	COG2818	Glycosylase
FY156_01895	COG2855	membrane
FY156_01900	COG0583	DNA-binding transcription factor activity
FY156_01925	COG0124	histidyl-tRNA synthetase
FY156_01935	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FY156_01940	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FY156_01945	COG2259	Doxx family
FY156_01955	COG0459	protein refolding
FY156_01960	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FY156_01965	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FY156_01975	COG0196	riboflavin kinase activity
FY156_01980	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FY156_01990	COG0590	tRNA wobble adenosine to inosine editing
FY156_01995	COG1187	pseudouridine synthase activity
FY156_02000	COG0742	ribosomal rna small subunit methyltransferase
FY156_02005	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY156_02010	COG0475	glutathione-regulated potassium exporter activity
FY156_02010	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FY156_02015	COG0312	modulator of DNA gyrase
FY156_02020	COG0483	inositol monophosphate 1-phosphatase activity
FY156_02030	COG1519	Transferase
FY156_02040	COG1663	tetraacyldisaccharide 4'-kinase activity
FY156_02050	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FY156_02055	COG2204	response regulator
FY156_02060	COG3300	MHYT domain
FY156_02060	COG5001	Diguanylate cyclase
FY156_02065	COG3386	PFAM SMP-30 Gluconolaconase
FY156_02070	COG0800	Aldolase
FY156_02075	COG3734	2-keto-3-deoxy-galactonokinase
FY156_02080	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_02090	COG2197	response regulator
FY156_02100	COG0489	protein tyrosine kinase activity
FY156_02110	COG3158	transport of potassium into the cell
FY156_02125	COG0356	it plays a direct role in the translocation of protons across the membrane
FY156_02130	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FY156_02135	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FY156_02140	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FY156_02145	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FY156_02160	COG0521	Mo-molybdopterin cofactor biosynthetic process
FY156_02165	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FY156_02175	COG0142	geranyltranstransferase activity
FY156_02200	COG0752	glycyl-tRNA synthetase alpha subunit
FY156_02205	COG1704	LemA family
FY156_02210	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FY156_02220	COG0751	glycine-tRNA ligase activity
FY156_02225	COG1683	Conserved Protein
FY156_02230	COG0840	transmembrane signaling receptor activity
FY156_02240	COG0151	Belongs to the GarS family
FY156_02245	COG2183	response to ionizing radiation
FY156_02250	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY156_02280	COG0009	L-threonylcarbamoyladenylate synthase
FY156_02290	COG4638	Rieske (2fe-2S)
FY156_02315	COG1960	acyl-CoA dehydrogenase activity
FY156_02330	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FY156_02335	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FY156_02340	COG0840	transmembrane signaling receptor activity
FY156_02345	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FY156_02350	COG1741	Belongs to the pirin family
FY156_02355	COG1722	exodeoxyribonuclease VII activity
FY156_02360	COG0123	including yeast histone deacetylase and acetoin utilization protein
FY156_02365	COG1268	BioY protein
FY156_02370	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FY156_02375	COG1122	ATPase activity
FY156_02380	COG3214	Protein conserved in bacteria
FY156_02390	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FY156_02405	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FY156_02410	COG0484	heat shock protein binding
FY156_02420	COG0259	pyridoxamine-phosphate oxidase activity
FY156_02435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY156_02445	COG0312	modulator of DNA gyrase
FY156_02460	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY156_02465	COG0109	protoheme IX farnesyltransferase activity
FY156_02470	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FY156_02490	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FY156_02495	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FY156_02500	COG0328	RNA-DNA hybrid ribonuclease activity
FY156_02510	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FY156_02510	COG0678	peroxiredoxin activity
FY156_02520	COG1678	Uncharacterized ACR, COG1678
FY156_02535	COG2203	Gaf domain
FY156_02535	COG4251	negative regulation of phosphorylation
FY156_02535	COG5001	Diguanylate cyclase
FY156_02535	COG3706	GGDEF domain
FY156_02540	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FY156_02545	COG0612	Peptidase, M16
FY156_02560	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY156_02570	COG1268	BioY protein
FY156_02585	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FY156_02605	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FY156_02610	COG1196	nuclear chromosome segregation
FY156_02615	COG2514	catechol 2,3-dioxygenase activity
FY156_02620	COG0574	Belongs to the PEP-utilizing enzyme family
FY156_02620	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FY156_02630	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
FY156_02635	COG1823	symporter activity
FY156_02660	COG3422	double-strand break repair
FY156_02665	COG0579	oxidoreductase
FY156_02680	COG2895	sulfate adenylyltransferase (ATP) activity
FY156_02685	COG0175	sulfate reduction
FY156_02690	COG0175	sulfate reduction
FY156_02695	COG1959	2 iron, 2 sulfur cluster binding
FY156_02700	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FY156_02705	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY156_02710	COG4208	sulfate ABC transporter
FY156_02715	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY156_02725	COG2200	EAL domain
FY156_02725	COG2203	Gaf domain
FY156_02725	COG2199	diguanylate cyclase activity
FY156_02740	COG1309	transcriptional regulator
FY156_02745	COG1012	belongs to the aldehyde dehydrogenase family
FY156_02750	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FY156_02780	COG1846	Transcriptional regulator
FY156_02785	COG0477	Major facilitator Superfamily
FY156_02790	COG3706	GGDEF domain
FY156_02800	COG1793	dna ligase
FY156_02815	COG1376	ErfK ybiS ycfS ynhG family protein
FY156_02820	COG1376	ErfK ybiS ycfS ynhG family protein
FY156_02825	COG1846	Transcriptional regulator
FY156_02830	COG1764	response to oxidative stress
FY156_02870	COG0583	DNA-binding transcription factor activity
FY156_02875	COG4221	oxidoreductase activity
FY156_02885	COG1234	tRNA 3'-trailer cleavage
FY156_02890	COG0433	COG0433 Predicted ATPase
FY156_02900	COG1733	regulation of RNA biosynthetic process
FY156_02905	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
FY156_02915	COG1280	lysine exporter protein (LysE YggA)
FY156_02920	COG0656	L-ascorbic acid biosynthetic process
FY156_02925	COG3781	membrane
FY156_02930	COG2378	regulation of single-species biofilm formation
FY156_02940	COG4106	trans-aconitate 2-methyltransferase activity
FY156_02945	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY156_02950	COG0583	DNA-binding transcription factor activity
FY156_02965	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FY156_02985	COG3909	cytochrome
FY156_02990	COG2010	Cytochrome c
FY156_03015	COG0456	acetyltransferase
FY156_03025	COG0789	Transcriptional regulator
FY156_03040	COG1230	cation diffusion facilitator family transporter
FY156_03050	COG4175	Glycine betaine
FY156_03050	COG3448	diguanylate cyclase activity
FY156_03055	COG4176	ABC-type proline glycine betaine transport system permease component
FY156_03075	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_03085	COG2169	Transcriptional regulator
FY156_03085	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY156_03095	COG2514	catechol 2,3-dioxygenase activity
FY156_03105	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FY156_03110	COG1272	protein, Hemolysin III
FY156_03120	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FY156_03125	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FY156_03125	COG2111	Na H antiporter
FY156_03130	COG2111	Na H antiporter
FY156_03135	COG1006	Multisubunit Na H antiporter MnhC subunit
FY156_03140	COG0651	ATP synthesis coupled electron transport
FY156_03145	COG1863	multisubunit Na H antiporter MnhE subunit
FY156_03150	COG2212	antiporter activity
FY156_03155	COG1320	monovalent cation:proton antiporter activity
FY156_03160	COG4957	zinc ion binding
FY156_03165	COG2166	iron-sulfur cluster assembly
FY156_03175	COG2205	protein histidine kinase activity
FY156_03220	COG0583	DNA-binding transcription factor activity
FY156_03230	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY156_03235	COG2983	Belongs to the UPF0260 family
FY156_03265	COG0477	Major facilitator Superfamily
FY156_03270	COG1621	beta-fructofuranosidase activity
FY156_03275	COG5001	Diguanylate cyclase
FY156_03275	COG3300	MHYT domain
FY156_03280	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FY156_03300	COG0702	epimerase
FY156_03340	COG4235	cytochrome complex assembly
FY156_03345	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FY156_03350	COG1138	Cytochrome C-type biogenesis protein
FY156_03355	COG3088	subunit of a heme lyase
FY156_03360	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY156_03365	COG0745	RESPONSE REGULATOR receiver
FY156_03370	COG2205	protein histidine kinase activity
FY156_03375	COG3011	Protein conserved in bacteria
FY156_03385	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FY156_03390	COG2205	protein histidine kinase activity
FY156_03390	COG2202	Pas domain
FY156_03400	COG0308	aminopeptidase N
FY156_03405	COG0697	spore germination
FY156_03420	COG0443	Heat shock 70 kDa protein
FY156_03445	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_03465	COG1733	regulation of RNA biosynthetic process
FY156_03470	COG1968	undecaprenyl-diphosphatase activity
FY156_03480	COG2239	Acts as a magnesium transporter
FY156_03485	COG2814	Major facilitator Superfamily
FY156_03495	COG0174	glutamine synthetase
FY156_03510	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FY156_03535	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FY156_03570	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FY156_03575	COG0741	lytic transglycosylase activity
FY156_03580	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_03585	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FY156_03590	COG0840	transmembrane signaling receptor activity
FY156_03600	COG1758	RNA polymerase activity
FY156_03620	COG0736	holo-[acyl-carrier-protein] synthase activity
FY156_03625	COG0681	Belongs to the peptidase S26 family
FY156_03630	COG0571	ribonuclease III activity
FY156_03635	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FY156_03640	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FY156_03645	COG0784	Response regulator, receiver
FY156_03650	COG1381	Involved in DNA repair and RecF pathway recombination
FY156_03665	COG1418	mRNA catabolic process
FY156_03675	COG0346	lactoylglutathione lyase activity
FY156_03690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_03695	COG0668	transmembrane transport
FY156_03705	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FY156_03735	COG1742	UPF0060 membrane protein
FY156_03740	COG2135	peptidase activity
FY156_03750	COG1183	phosphatidylcholine synthase activity
FY156_03755	COG0688	phosphatidylethanolamine metabolic process
FY156_03760	COG5265	(ABC) transporter
FY156_03800	COG0215	cysteine-tRNA ligase activity
FY156_03805	COG4221	oxidoreductase activity
FY156_03810	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FY156_03815	COG1286	toxin biosynthetic process
FY156_03825	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FY156_03835	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FY156_03845	COG0305	Participates in initiation and elongation during chromosome replication
FY156_03865	COG0359	binds to the 23S rRNA
FY156_03875	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FY156_03880	COG0360	Binds together with S18 to 16S ribosomal RNA
FY156_03885	COG0596	Alpha beta hydrolase
FY156_03890	COG0667	Aldo Keto reductase
FY156_03895	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FY156_03905	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY156_03910	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY156_03915	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FY156_03920	COG1561	YicC-like family, N-terminal region
FY156_03925	COG0194	GDP metabolic process
FY156_03930	COG0400	carboxylic ester hydrolase activity
FY156_03935	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FY156_03940	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY156_03950	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FY156_03965	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FY156_03985	COG0726	polysaccharide deacetylase
FY156_03990	COG0488	(ABC) transporter
FY156_03995	COG3706	GGDEF domain
FY156_04005	COG0105	UTP biosynthetic process
FY156_04025	COG0314	molybdopterin synthase activity
FY156_04035	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FY156_04040	COG0322	excinuclease ABC activity
FY156_04045	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_04055	COG0625	glutathione transferase activity
FY156_04070	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FY156_04075	COG0243	molybdopterin cofactor binding
FY156_04090	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FY156_04095	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FY156_04105	COG0628	permease
FY156_04115	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FY156_04120	COG0248	Ppx GppA phosphatase
FY156_04140	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FY156_04145	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FY156_04150	COG0477	Major facilitator Superfamily
FY156_04155	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FY156_04160	COG4452	Inner membrane protein CreD
FY156_04170	COG0840	transmembrane signaling receptor activity
FY156_04175	COG0659	secondary active sulfate transmembrane transporter activity
FY156_04185	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FY156_04190	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FY156_04200	COG0113	porphobilinogen synthase activity
FY156_04220	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FY156_04225	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FY156_04230	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FY156_04230	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FY156_04240	COG1280	lysine exporter protein (LysE YggA)
FY156_04245	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FY156_04250	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FY156_04255	COG2814	Major facilitator Superfamily
FY156_04260	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
FY156_04280	COG0416	fatty acid biosynthetic process
FY156_04285	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FY156_04290	COG0776	regulation of translation
FY156_04315	COG1278	Cold shock
FY156_04325	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FY156_04360	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FY156_04365	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FY156_04380	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FY156_04385	COG0583	DNA-binding transcription factor activity
FY156_04395	COG0737	Belongs to the 5'-nucleotidase family
FY156_04420	COG2897	thiosulfate sulfurtransferase activity
FY156_04425	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FY156_04435	COG0415	Belongs to the DNA photolyase family
FY156_04445	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY156_04765	COG3932	Exopolysaccharide synthesis, ExoD
FY156_04770	COG1238	metal cluster binding
FY156_04810	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FY156_04840	COG1612	heme a metabolic process
FY156_04850	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FY156_04855	COG0010	Belongs to the arginase family
FY156_04860	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FY156_04865	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FY156_04875	COG1832	CoA-binding protein
FY156_04890	COG1346	cytolysis
FY156_04895	COG1380	Effector of murein hydrolase LrgA
FY156_04900	COG0583	DNA-binding transcription factor activity
FY156_04905	COG2124	cytochrome p450
FY156_04910	COG2199	diguanylate cyclase activity
FY156_04915	COG0740	serine-type endopeptidase activity
FY156_04920	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FY156_04930	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FY156_04965	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY156_04970	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY156_04975	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY156_04985	COG0649	NAD binding
FY156_04995	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FY156_05000	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FY156_05010	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FY156_05015	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY156_05040	COG1007	ATP synthesis coupled electron transport
FY156_05045	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FY156_05045	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FY156_05060	COG0442	prolyl-tRNA aminoacylation
FY156_05070	COG1136	(ABC) transporter
FY156_05085	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FY156_05095	COG0784	Response regulator, receiver
FY156_05105	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FY156_05110	COG0477	Major facilitator Superfamily
FY156_05125	COG0557	exoribonuclease II activity
FY156_05130	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FY156_05135	COG0758	DNA mediated transformation
FY156_05140	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FY156_05150	COG0540	Belongs to the ATCase OTCase family
FY156_05160	COG1960	acyl-CoA dehydrogenase activity
FY156_05165	COG0456	acetyltransferase
FY156_05190	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FY156_05195	COG2824	Alkylphosphonate utilization operon protein PhnA
FY156_05200	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FY156_05205	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FY156_05210	COG0154	amidase activity
FY156_05215	COG3811	Belongs to the UPF0386 family
FY156_05230	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FY156_05240	COG0456	acetyltransferase
FY156_05255	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FY156_05265	COG0511	ligase activity, forming carbon-carbon bonds
FY156_05270	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FY156_05280	COG0436	Aminotransferase
FY156_05300	COG1530	ribonuclease E activity
FY156_05310	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY156_05330	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FY156_05335	COG0384	phenazine biosynthesis protein PhzF
FY156_05350	COG0633	Ferredoxin
FY156_05360	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FY156_05365	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FY156_05370	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FY156_05380	COG3768	UPF0283 membrane protein
FY156_05385	COG3106	COG3106 Predicted ATPase
FY156_05410	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FY156_05440	COG0583	DNA-binding transcription factor activity
FY156_05450	COG0537	adenosine 5'-monophosphoramidase activity
FY156_05475	COG0052	Belongs to the universal ribosomal protein uS2 family
FY156_05480	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FY156_05485	COG0528	UMP kinase activity
FY156_05490	COG0233	cytoplasmic translational termination
FY156_05495	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FY156_05505	COG0750	zinc metalloprotease
FY156_05510	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FY156_05515	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY156_05520	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY156_05525	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY156_05535	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY156_05540	COG0372	Belongs to the citrate synthase family
FY156_05555	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FY156_05575	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FY156_05580	COG0148	phosphopyruvate hydratase activity
FY156_05590	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FY156_05595	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY156_05595	COG0022	dehydrogenase e1 component
FY156_05600	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY156_05610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FY156_05620	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FY156_05625	COG0697	spore germination
FY156_05640	COG2867	negative regulation of translational initiation
FY156_05645	COG1546	Belongs to the CinA family
FY156_05650	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FY156_05650	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FY156_05660	COG3852	Histidine kinase
FY156_05665	COG2204	response regulator
FY156_05670	COG5000	phosphorelay sensor kinase activity
FY156_05675	COG2204	response regulator
FY156_05680	COG0569	domain protein
FY156_05685	COG1923	regulation of RNA biosynthetic process
FY156_05690	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FY156_05700	COG3956	TIGRFAM MazG family protein
FY156_05710	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FY156_05710	COG1648	precorrin-2 dehydrogenase activity
FY156_05745	COG3706	GGDEF domain
FY156_05760	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FY156_05760	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FY156_05765	COG0509	glycine decarboxylation via glycine cleavage system
FY156_05770	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY156_05795	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FY156_05805	COG0546	phosphoglycolate phosphatase activity
FY156_05820	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FY156_05830	COG1671	Belongs to the UPF0178 family
FY156_05855	COG1846	Transcriptional regulator
FY156_05870	COG2860	membrane
FY156_05895	COG2826	transposase and inactivated derivatives, IS30 family
FY156_05905	COG1253	flavin adenine dinucleotide binding
FY156_05915	COG3220	belongs to the UPF0276 family
FY156_05930	COG0038	chloride channel
FY156_05935	COG0321	lipoyl(octanoyl) transferase activity
FY156_05935	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FY156_05940	COG0084	hydrolase, TatD family'
FY156_05945	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY156_05955	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FY156_05985	COG0583	DNA-binding transcription factor activity
FY156_06000	COG1012	belongs to the aldehyde dehydrogenase family
FY156_06220	COG3750	Belongs to the UPF0335 family
FY156_06270	COG1396	sequence-specific DNA binding
FY156_06375	COG0582	viral genome integration into host DNA
FY156_06420	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FY156_06425	COG0372	Belongs to the citrate synthase family
FY156_06435	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY156_06450	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY156_06465	COG2814	Major facilitator Superfamily
FY156_06475	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY156_06480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_06485	COG1309	transcriptional regulator
FY156_06500	COG1073	alpha beta
FY156_06505	COG0583	DNA-binding transcription factor activity
FY156_06510	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FY156_06515	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FY156_06525	COG2095	MarC family integral membrane protein
FY156_06535	COG0629	single-stranded DNA binding
FY156_06540	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FY156_06555	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FY156_06580	COG3237	CsbD-like
FY156_06630	COG0583	DNA-binding transcription factor activity
FY156_06635	COG3238	Protein conserved in bacteria
FY156_06645	COG1396	sequence-specific DNA binding
FY156_06655	COG2207	Transcriptional regulator
FY156_06660	COG4221	oxidoreductase activity
FY156_06735	COG1522	sequence-specific DNA binding
FY156_06765	COG0583	DNA-binding transcription factor activity
FY156_06770	COG0667	Aldo Keto reductase
FY156_06790	COG1309	transcriptional regulator
FY156_06795	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_06800	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FY156_06835	COG0583	DNA-binding transcription factor activity
FY156_06850	COG1960	acyl-CoA dehydrogenase activity
FY156_06995	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY156_07000	COG1846	Transcriptional regulator
FY156_07020	COG0384	phenazine biosynthesis protein PhzF
FY156_07035	COG4319	ketosteroid isomerase
FY156_07095	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_07115	COG4977	sequence-specific DNA binding
FY156_07125	COG0431	NADPH-dependent FMN reductase
FY156_07135	COG0798	PFAM Bile acid sodium symporter
FY156_07150	COG3226	Transcriptional regulator
FY156_07155	COG0738	Major facilitator superfamily
FY156_07170	COG0628	permease
FY156_07190	COG1228	amidohydrolase
FY156_07205	COG2212	antiporter activity
FY156_07210	COG0387	Pfam Sodium calcium exchanger
FY156_07215	COG0356	it plays a direct role in the translocation of protons across the membrane
FY156_07225	COG0640	Transcriptional regulator
FY156_07255	COG1073	alpha beta
FY156_07280	COG0667	Aldo Keto reductase
FY156_07285	COG0667	Aldo Keto reductase
FY156_07300	COG2814	Major facilitator Superfamily
FY156_07315	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FY156_07325	COG1335	isochorismatase
FY156_07345	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_07360	COG0456	acetyltransferase
FY156_07370	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY156_07400	COG1733	regulation of RNA biosynthetic process
FY156_07405	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FY156_07405	COG0456	acetyltransferase
FY156_07410	COG1473	amidohydrolase
FY156_07425	COG1522	sequence-specific DNA binding
FY156_07445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_07450	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY156_07510	COG2267	carboxylic ester hydrolase activity
FY156_07515	COG0477	Major facilitator Superfamily
FY156_07520	COG0583	DNA-binding transcription factor activity
FY156_07535	COG1473	amidohydrolase
FY156_07540	COG0702	epimerase
FY156_07545	COG0667	Aldo Keto reductase
FY156_07565	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_07570	COG0583	DNA-binding transcription factor activity
FY156_07575	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FY156_07580	COG1942	4-Oxalocrotonate Tautomerase
FY156_07585	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FY156_07585	COG0519	Catalyzes the synthesis of GMP from XMP
FY156_07625	COG1733	regulation of RNA biosynthetic process
FY156_07635	COG0583	DNA-binding transcription factor activity
FY156_07670	COG0726	polysaccharide deacetylase
FY156_07685	COG2202	Pas domain
FY156_07685	COG3920	Histidine kinase
FY156_07690	COG0784	Response regulator, receiver
FY156_07690	COG4191	Histidine kinase
FY156_07750	COG0179	Fumarylacetoacetate (FAA) hydrolase
FY156_07760	COG0735	belongs to the Fur family
FY156_07765	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY156_07770	COG1121	(ABC) transporter
FY156_07780	COG1609	Transcriptional regulator
FY156_07790	COG0667	Aldo Keto reductase
FY156_07800	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FY156_07880	COG2239	Acts as a magnesium transporter
FY156_07885	COG0243	molybdopterin cofactor binding
FY156_07895	COG0242	peptide deformylase activity
FY156_07925	COG0321	lipoyl(octanoyl) transferase activity
FY156_07930	COG1064	alcohol dehydrogenase
FY156_07960	COG1862	Preprotein translocase
FY156_07975	COG1045	serine acetyltransferase
FY156_07980	COG2267	carboxylic ester hydrolase activity
FY156_07995	COG0626	cystathionine gamma-synthase activity
FY156_08000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_08005	COG4597	amino acid ABC transporter
FY156_08010	COG0765	amino acid transport
FY156_08015	COG1126	abc transporter atp-binding protein
FY156_08030	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FY156_08045	COG0436	Aminotransferase
FY156_08075	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY156_08080	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY156_08085	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY156_08090	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY156_08095	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FY156_08110	COG3243	poly(R)-hydroxyalkanoic acid synthase
FY156_08115	COG1489	DNA binding
FY156_08120	COG0024	Methionine aminopeptidase
FY156_08125	COG2003	Belongs to the UPF0758 family
FY156_08140	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
FY156_08155	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FY156_08160	COG0546	phosphoglycolate phosphatase activity
FY156_08175	COG0114	fumarate hydratase activity
FY156_08180	COG0504	CTP synthase activity
FY156_08190	COG0149	triose-phosphate isomerase activity
FY156_08200	COG0187	DNA topoisomerase II activity
FY156_08205	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY156_08210	COG0745	RESPONSE REGULATOR receiver
FY156_08220	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FY156_08220	COG3264	Mechanosensitive ion channel
FY156_08270	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FY156_08270	COG3218	ABC-type transport auxiliary lipoprotein component
FY156_08280	COG1127	ABC transporter
FY156_08285	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FY156_08290	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_08300	COG0280	phosphate acetyltransferase
FY156_08300	COG0281	malic enzyme
FY156_08310	COG0778	Nitroreductase
FY156_08315	COG0823	Involved in the tonB-independent uptake of proteins
FY156_08330	COG1368	sulfuric ester hydrolase activity
FY156_08355	COG0544	peptidyl-prolyl cis-trans isomerase activity
FY156_08375	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
FY156_08380	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FY156_08395	COG0318	PFAM AMP-dependent synthetase and ligase
FY156_08400	COG0019	diaminopimelate decarboxylase activity
FY156_08405	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FY156_08405	COG0512	Glutamine amidotransferase of anthranilate synthase
FY156_08410	COG0343	queuine tRNA-ribosyltransferase activity
FY156_08415	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FY156_08430	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FY156_08450	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY156_08455	COG0134	indole-3-glycerol-phosphate synthase activity
FY156_08460	COG0315	cyclic pyranopterin monophosphate synthase activity
FY156_08465	COG0303	'Molybdopterin
FY156_08470	COG3706	GGDEF domain
FY156_08480	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FY156_08480	COG0475	glutathione-regulated potassium exporter activity
FY156_08490	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FY156_08495	COG0697	spore germination
FY156_08500	COG2814	Major facilitator Superfamily
FY156_08505	COG0746	molybdenum cofactor guanylyltransferase activity
FY156_08510	COG1763	Mo-molybdopterin cofactor biosynthetic process
FY156_08515	COG0739	heme binding
FY156_08520	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FY156_08525	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FY156_08530	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FY156_08535	COG0805	protein transport
FY156_08540	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FY156_08545	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FY156_08550	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FY156_08555	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FY156_08560	COG1472	Belongs to the glycosyl hydrolase 3 family
FY156_08570	COG0018	arginyl-trna synthetase
FY156_08575	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FY156_08580	COG0316	Belongs to the HesB IscA family
FY156_08605	COG0525	valine-tRNA ligase activity
FY156_08615	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FY156_08640	COG0655	NAD(P)H dehydrogenase (quinone) activity
FY156_08645	COG1546	Belongs to the CinA family
FY156_08645	COG1058	Belongs to the CinA family
FY156_08650	COG0589	response to stress
FY156_08655	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FY156_08660	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FY156_08685	COG4251	negative regulation of phosphorylation
FY156_08685	COG2203	Gaf domain
FY156_08685	COG5001	Diguanylate cyclase
FY156_08685	COG3706	GGDEF domain
FY156_08715	COG4191	Histidine kinase
FY156_08720	COG4566	intracellular signal transduction
FY156_08725	COG1132	(ABC) transporter
FY156_08760	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FY156_08775	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FY156_08785	COG0302	gtp cyclohydrolase
FY156_08790	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FY156_08795	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY156_08800	COG0517	IMP dehydrogenase activity
FY156_08800	COG0516	GMP reductase activity
FY156_08830	COG1760	l-serine dehydratase
FY156_08850	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FY156_08860	COG0583	DNA-binding transcription factor activity
FY156_08875	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FY156_08875	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FY156_08880	COG0347	Belongs to the P(II) protein family
FY156_08885	COG0174	glutamine synthetase
FY156_08915	COG0697	spore germination
FY156_08920	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FY156_08930	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FY156_08950	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FY156_08955	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FY156_08960	COG2186	Transcriptional regulator
FY156_08970	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY156_08975	COG4603	Belongs to the binding-protein-dependent transport system permease family
FY156_08980	COG3845	ABC transporter
FY156_08985	COG1183	phosphatidylcholine synthase activity
FY156_08990	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY156_08995	COG0679	Auxin Efflux Carrier
FY156_09000	COG0785	Cytochrome C biogenesis protein
FY156_09025	COG1278	Cold shock
FY156_09085	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY156_09205	COG3646	Phage regulatory protein
FY156_09260	COG0616	signal peptide processing
FY156_09365	COG1061	Type III restriction enzyme res subunit
FY156_09500	COG0582	viral genome integration into host DNA
FY156_09530	COG1136	(ABC) transporter
FY156_09530	COG0577	efflux transmembrane transporter activity
FY156_09535	COG0577	efflux transmembrane transporter activity
FY156_09535	COG1136	(ABC) transporter
FY156_09545	COG2151	metal-sulfur cluster biosynthetic enzyme
FY156_09550	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FY156_09555	COG0719	Fe-S assembly protein
FY156_09560	COG0396	ATPase activity
FY156_09565	COG0719	Fe-S assembly protein
FY156_09570	COG1104	cysteine desulfurase activity
FY156_09575	COG2945	thiolester hydrolase activity
FY156_09580	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FY156_09585	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FY156_09595	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FY156_09600	COG0739	heme binding
FY156_09605	COG0513	Belongs to the DEAD box helicase family
FY156_09630	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FY156_09645	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FY156_09650	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FY156_09655	COG0047	phosphoribosylformylglycinamidine synthase activity
FY156_09670	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY156_09680	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FY156_09700	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FY156_09705	COG2814	Major facilitator Superfamily
FY156_09710	COG0483	inositol monophosphate 1-phosphatase activity
FY156_09715	COG0483	inositol monophosphate 1-phosphatase activity
FY156_09720	COG0037	tRNA processing
FY156_09725	COG2066	Belongs to the glutaminase family
FY156_09730	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FY156_09735	COG0861	Integral membrane protein TerC family
FY156_09750	COG1280	lysine exporter protein (LysE YggA)
FY156_09760	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FY156_09765	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FY156_09775	COG0538	isocitrate dehydrogenase activity
FY156_09785	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FY156_09790	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FY156_09800	COG2313	pseudouridylate synthase activity
FY156_09825	COG5425	PFAM Usg family protein
FY156_09835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY156_09840	COG1522	sequence-specific DNA binding
FY156_09845	COG1573	uracil-dna glycosylase
FY156_09855	COG2202	Pas domain
FY156_09855	COG2205	protein histidine kinase activity
FY156_09865	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FY156_09870	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FY156_09895	COG0842	Transport permease protein
FY156_09900	COG1131	(ABC) transporter
FY156_09905	COG0730	response to heat
FY156_09915	COG0840	transmembrane signaling receptor activity
FY156_09915	COG0840	transmembrane signaling receptor activity
FY156_09925	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FY156_09930	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY156_09945	COG0129	dihydroxy-acid dehydratase activity
FY156_09950	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FY156_09955	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FY156_09965	COG3739	integral membrane protein
FY156_09970	COG0203	ribosomal protein L17
FY156_09975	COG0202	RNA polymerase activity
FY156_09980	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FY156_09985	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FY156_09990	COG0563	adenylate kinase activity
FY156_09995	COG0201	protein transport
FY156_10000	COG0200	Binds to the 23S rRNA
FY156_10005	COG1841	ribosomal large subunit assembly
FY156_10010	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FY156_10015	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FY156_10020	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FY156_10025	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FY156_10030	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FY156_10035	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FY156_10040	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FY156_10045	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FY156_10050	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FY156_10055	COG0255	Belongs to the universal ribosomal protein uL29 family
FY156_10060	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FY156_10065	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FY156_10070	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FY156_10075	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FY156_10080	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FY156_10085	COG0089	rRNA binding
FY156_10090	COG0088	Forms part of the polypeptide exit tunnel
FY156_10095	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FY156_10100	COG0051	transcription antitermination factor activity, RNA binding
FY156_10105	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FY156_10110	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FY156_10115	COG0049	tRNA binding
FY156_10120	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FY156_10130	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FY156_10135	COG0085	RNA polymerase activity
FY156_10140	COG0222	ribosome binding
FY156_10145	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FY156_10150	COG0081	regulation of translation
FY156_10155	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FY156_10165	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FY156_10175	COG0406	alpha-ribazole phosphatase activity
FY156_10180	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FY156_10185	COG0861	Integral membrane protein TerC family
FY156_10190	COG3895	Periplasmic Protein
FY156_10205	COG0583	DNA-binding transcription factor activity
FY156_10210	COG2814	Major facilitator Superfamily
FY156_10215	COG0657	acetylesterase activity
FY156_10225	COG0583	DNA-binding transcription factor activity
FY156_10240	COG2894	cell division
FY156_10300	COG4584	PFAM Integrase catalytic
FY156_10305	COG1484	DNA-dependent DNA replication
FY156_10315	COG2336	PFAM SpoVT AbrB
FY156_10380	COG2832	Protein of unknown function (DUF454)
FY156_10390	COG0848	biopolymer transport protein
FY156_10495	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FY156_10535	COG4993	Dehydrogenase
FY156_10545	COG1335	isochorismatase
FY156_10555	COG1902	pentaerythritol trinitrate reductase activity
FY156_10580	COG1279	arginine transmembrane transporter activity
FY156_10705	COG1484	DNA-dependent DNA replication
FY156_10710	COG4584	PFAM Integrase catalytic
FY156_10725	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FY156_10730	COG0473	3-isopropylmalate dehydrogenase activity
FY156_10730	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY156_10735	COG0473	3-isopropylmalate dehydrogenase activity
FY156_10735	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY156_10740	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY156_10750	COG2070	2-Nitropropane dioxygenase
FY156_10765	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_10770	COG0583	DNA-binding transcription factor activity
FY156_10785	COG2814	Major facilitator Superfamily
FY156_10800	COG0583	DNA-binding transcription factor activity
FY156_10805	COG0583	DNA-binding transcription factor activity
FY156_10810	COG1902	pentaerythritol trinitrate reductase activity
FY156_10820	COG1335	isochorismatase
FY156_10830	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_10840	COG1741	Belongs to the pirin family
FY156_10860	COG2814	Major facilitator Superfamily
FY156_10870	COG1566	PFAM secretion protein HlyD family protein
FY156_10890	COG1396	sequence-specific DNA binding
FY156_10900	COG0582	viral genome integration into host DNA
FY156_10915	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FY156_10950	COG0556	nucleotide-excision repair
FY156_10955	COG2382	esterase
FY156_10975	COG0484	heat shock protein binding
FY156_11000	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_11005	COG1116	anion transmembrane transporter activity
FY156_11010	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FY156_11015	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_11025	COG0583	DNA-binding transcription factor activity
FY156_11055	COG1840	ABC-type Fe3 transport system, periplasmic component
FY156_11060	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY156_11070	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FY156_11080	COG2207	Transcriptional regulator
FY156_11085	COG1064	alcohol dehydrogenase
FY156_11090	COG1252	NADH dehydrogenase
FY156_11095	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FY156_11105	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FY156_11110	COG1090	epimerase
FY156_11140	COG0656	L-ascorbic acid biosynthetic process
FY156_11155	COG0440	acetolactate synthase activity
FY156_11160	COG0028	Belongs to the TPP enzyme family
FY156_11170	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FY156_11175	COG0560	Phosphoserine phosphatase
FY156_11175	COG3830	Belongs to the UPF0237 family
FY156_11185	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_11195	COG0330	HflC and HflK could
FY156_11200	COG0330	HflC and HflK could
FY156_11210	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FY156_11250	COG0277	FAD linked oxidase domain protein
FY156_11255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY156_11260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_11295	COG1335	isochorismatase
FY156_11310	COG0006	proline dipeptidase activity
FY156_11315	COG2264	protein methyltransferase activity
FY156_11325	COG0835	chemotaxis
FY156_11345	COG0697	spore germination
FY156_11350	COG1247	-acetyltransferase
FY156_11360	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FY156_11365	COG0497	DNA recombination
FY156_11370	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FY156_11380	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY156_11385	COG0849	cell division
FY156_11390	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FY156_11395	COG1181	Belongs to the D-alanine--D-alanine ligase family
FY156_11400	COG0477	Major facilitator Superfamily
FY156_11405	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FY156_11410	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FY156_11415	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FY156_11425	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FY156_11430	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FY156_11440	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FY156_11455	COG0275	rRNA processing
FY156_11460	COG2001	Belongs to the MraZ family
FY156_11485	COG3023	N-Acetylmuramoyl-L-alanine amidase
FY156_11490	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FY156_11535	COG0640	Transcriptional regulator
FY156_11545	COG2267	carboxylic ester hydrolase activity
FY156_11555	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FY156_11560	COG0028	Belongs to the TPP enzyme family
FY156_11570	COG0251	oxidation-reduction process
FY156_11575	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY156_11575	COG3453	Protein conserved in bacteria
FY156_11585	COG1376	ErfK ybiS ycfS ynhG family protein
FY156_11590	COG2814	Major facilitator Superfamily
FY156_11595	COG1309	transcriptional regulator
FY156_11615	COG1012	belongs to the aldehyde dehydrogenase family
FY156_11620	COG0174	glutamine synthetase
FY156_11625	COG0531	amino acid
FY156_11635	COG1737	Transcriptional regulator
FY156_11655	COG3842	ATPase activity
FY156_11705	COG2968	Membrane
FY156_11715	COG0432	Pfam Uncharacterised protein family UPF0047
FY156_11720	COG4251	negative regulation of phosphorylation
FY156_11730	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FY156_11735	COG0358	DNA primase activity
FY156_11745	COG0505	Belongs to the CarA family
FY156_11750	COG0534	Mate efflux family protein
FY156_11765	COG2321	neutral zinc metallopeptidase
FY156_11775	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FY156_11785	COG0477	Major facilitator Superfamily
FY156_11790	COG1573	uracil-dna glycosylase
FY156_11800	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FY156_11810	COG1522	sequence-specific DNA binding
FY156_11815	COG0492	ferredoxin-NADP+ reductase activity
FY156_11820	COG0583	DNA-binding transcription factor activity
FY156_11830	COG1902	pentaerythritol trinitrate reductase activity
FY156_11855	COG0436	Aminotransferase
FY156_11860	COG2199	diguanylate cyclase activity
FY156_11860	COG2200	EAL domain
FY156_11875	COG1278	Cold shock
FY156_11880	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY156_11890	COG1846	Transcriptional regulator
FY156_11895	COG0745	RESPONSE REGULATOR receiver
FY156_11905	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY156_11925	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FY156_11935	COG1496	oxidoreductase activity
FY156_11950	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FY156_11960	COG0840	transmembrane signaling receptor activity
FY156_11965	COG1012	belongs to the aldehyde dehydrogenase family
FY156_11975	COG5001	Diguanylate cyclase
FY156_11975	COG3300	MHYT domain
FY156_11980	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FY156_11985	COG5001	Diguanylate cyclase
FY156_11985	COG3300	MHYT domain
FY156_11995	COG0193	aminoacyl-tRNA hydrolase activity
FY156_12000	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FY156_12005	COG0012	GTP binding
FY156_12020	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FY156_12030	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FY156_12030	COG2857	Cytochrome c1
FY156_12050	COG1132	(ABC) transporter
FY156_12055	COG1132	(ABC) transporter
FY156_12060	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FY156_12075	COG0408	coproporphyrinogen oxidase activity
FY156_12090	COG0617	tRNA 3'-terminal CCA addition
FY156_12105	COG0714	Associated with various cellular activities
FY156_12125	COG0454	-acetyltransferase
FY156_12130	COG0477	Major facilitator Superfamily
FY156_12140	COG0435	Glutathione S-transferase
FY156_12155	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FY156_12160	COG3135	benzoate transporter
FY156_12175	COG0740	serine-type endopeptidase activity
FY156_12190	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FY156_12195	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FY156_12210	COG0512	Glutamine amidotransferase of anthranilate synthase
FY156_12210	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FY156_12225	COG2862	Uncharacterized protein family, UPF0114
FY156_12245	COG1435	thymidine kinase activity
FY156_12260	COG4175	Glycine betaine
FY156_12280	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FY156_12290	COG0366	Alpha amylase catalytic
FY156_12295	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY156_12310	COG1160	GTP binding
FY156_12330	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FY156_12340	COG0024	Methionine aminopeptidase
FY156_12350	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_12370	COG0583	DNA-binding transcription factor activity
FY156_12385	COG0402	S-adenosylhomocysteine deaminase activity
FY156_12405	COG1309	transcriptional regulator
FY156_12410	COG1686	Belongs to the peptidase S11 family
FY156_12420	COG2351	hydroxyisourate hydrolase activity
FY156_12425	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FY156_12435	COG3648	Uricase
FY156_12435	COG3195	allantoin biosynthetic process
FY156_12445	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY156_12450	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_12450	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FY156_12455	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_12455	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FY156_12465	COG0513	Belongs to the DEAD box helicase family
FY156_12475	COG2259	Doxx family
FY156_12490	COG1376	ErfK ybiS ycfS ynhG family protein
FY156_12500	COG2308	Evidence 4 Homologs of previously reported genes of
FY156_12510	COG1305	Transglutaminase-like
FY156_12535	COG4214	carbohydrate transport
FY156_12540	COG1129	ABC transporter
FY156_12545	COG4213	ABC transporter substrate-binding protein
FY156_12590	COG1216	Glycosyl transferase, family 2
FY156_12610	COG0300	oxidoreductase activity
FY156_12615	COG3321	synthase
FY156_12615	COG0604	alcohol dehydrogenase
FY156_12615	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_12635	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
FY156_12665	COG1216	Glycosyl transferase, family 2
FY156_12685	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FY156_12690	COG2346	COG2346, Truncated hemoglobins
FY156_12710	COG1309	transcriptional regulator
FY156_12720	COG0454	-acetyltransferase
FY156_12730	COG0494	nUDIX hydrolase
FY156_12740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_12745	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_12775	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FY156_12780	COG0830	nickel cation binding
FY156_12785	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
FY156_12795	COG0804	urea catabolic process
FY156_12800	COG1442	glycosyl transferase family 8
FY156_12805	COG3755	Protein conserved in bacteria
FY156_12815	COG0832	Belongs to the urease beta subunit family
FY156_12820	COG3813	Protein conserved in bacteria
FY156_12825	COG0831	urea catabolic process
FY156_12830	COG0829	nickel cation binding
FY156_12845	COG0411	ABC transporter
FY156_12855	COG0559	Belongs to the binding-protein-dependent transport system permease family
FY156_12870	COG0174	glutamine synthetase
FY156_12875	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_12880	COG5002	protein histidine kinase activity
FY156_12880	COG0784	Response regulator, receiver
FY156_12880	COG2198	Histidine kinase
FY156_12885	COG0745	RESPONSE REGULATOR receiver
FY156_12890	COG1218	3'(2'),5'-bisphosphate nucleotidase
FY156_12965	COG0251	oxidation-reduction process
FY156_12995	COG0564	pseudouridine synthase activity
FY156_13005	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FY156_13015	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FY156_13035	COG0583	DNA-binding transcription factor activity
FY156_13040	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY156_13050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_13055	COG0402	S-adenosylhomocysteine deaminase activity
FY156_13065	COG2249	NAD(P)H dehydrogenase (quinone) activity
FY156_13075	COG0251	oxidation-reduction process
FY156_13085	COG0346	lactoylglutathione lyase activity
FY156_13095	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FY156_13105	COG2832	Protein of unknown function (DUF454)
FY156_13110	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FY156_13115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_13120	COG4558	Periplasmic binding protein
FY156_13130	COG3721	Heme iron utilization protein
FY156_13135	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FY156_13180	COG4607	ABC-type enterochelin transport system periplasmic component
FY156_13185	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_13190	COG4605	iron ion homeostasis
FY156_13195	COG4604	ABC transporter, ATP-binding protein
FY156_13200	COG0783	Belongs to the Dps family
FY156_13215	COG0656	L-ascorbic acid biosynthetic process
FY156_13220	COG2814	Major facilitator Superfamily
FY156_13225	COG0583	DNA-binding transcription factor activity
FY156_13230	COG0583	DNA-binding transcription factor activity
FY156_13235	COG0657	acetylesterase activity
FY156_13240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_13260	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY156_13265	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FY156_13270	COG0288	reversible hydration of carbon dioxide
FY156_13280	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FY156_13295	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FY156_13300	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY156_13305	COG0778	Nitroreductase
FY156_13310	COG2267	carboxylic ester hydrolase activity
FY156_13315	COG0251	oxidation-reduction process
FY156_13320	COG1335	isochorismatase
FY156_13325	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_13335	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_13350	COG1175	transmembrane transport
FY156_13355	COG0395	ABC-type sugar transport system, permease component
FY156_13360	COG3842	ATPase activity
FY156_13365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY156_13390	COG4608	Belongs to the ABC transporter superfamily
FY156_13395	COG0444	Belongs to the ABC transporter superfamily
FY156_13400	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_13405	COG0601	transmembrane transport
FY156_13425	COG0392	lysyltransferase activity
FY156_13425	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FY156_13440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_13445	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY156_13455	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FY156_13515	COG1696	Membrane protein involved in D-alanine export
FY156_13530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_13535	COG1131	(ABC) transporter
FY156_13540	COG0842	Transport permease protein
FY156_13545	COG0842	Transport permease protein
FY156_13555	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_13605	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FY156_13610	COG1309	transcriptional regulator
FY156_13615	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_13620	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY156_13630	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FY156_13635	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FY156_13660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_13665	COG3766	membrane
FY156_13675	COG0754	glutathionylspermidine amidase activity
FY156_13680	COG0725	ABC transporter, periplasmic molybdate-binding protein
FY156_13685	COG4149	molybdate abc transporter
FY156_13690	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FY156_13700	COG3191	aminopeptidase activity
FY156_13705	COG2022	thiamine diphosphate biosynthetic process
FY156_13720	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FY156_13725	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY156_13735	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FY156_13755	COG1132	(ABC) transporter
FY156_13760	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FY156_13810	COG0601	transmembrane transport
FY156_13815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_13825	COG0438	transferase activity, transferring glycosyl groups
FY156_13830	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FY156_13835	COG3142	Participates in the control of copper homeostasis
FY156_13840	COG2814	Major facilitator Superfamily
FY156_13860	COG1737	Transcriptional regulator
FY156_13870	COG3842	ATPase activity
FY156_13880	COG0395	ABC-type sugar transport system, permease component
FY156_13895	COG2188	Transcriptional regulator
FY156_13900	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FY156_13905	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FY156_13910	COG1940	carbohydrate kinase activity
FY156_13920	COG0671	phosphoesterase, PA-phosphatase related
FY156_13925	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FY156_13930	COG0156	8-amino-7-oxononanoate synthase activity
FY156_13940	COG0729	surface antigen
FY156_13950	COG0835	chemotaxis
FY156_13960	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FY156_13965	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FY156_13970	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FY156_13975	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FY156_13980	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FY156_13985	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FY156_14000	COG4974	Belongs to the 'phage' integrase family
FY156_14025	COG1280	lysine exporter protein (LysE YggA)
FY156_14030	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY156_14040	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FY156_14045	COG0045	succinate-CoA ligase (ADP-forming) activity
FY156_14050	COG0039	L-malate dehydrogenase activity
FY156_14055	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FY156_14090	COG2264	protein methyltransferase activity
FY156_14105	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FY156_14110	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FY156_14115	COG0181	hydroxymethylbilane synthase activity
FY156_14155	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FY156_14165	COG1217	gtp-binding protein TYPA
FY156_14170	COG0339	signal peptide processing
FY156_14180	COG1846	Transcriptional regulator
FY156_14190	COG0137	argininosuccinate synthase activity
FY156_14200	COG1280	lysine exporter protein (LysE YggA)
FY156_14205	COG1122	ATPase activity
FY156_14210	COG4120	Belongs to the binding-protein-dependent transport system permease family
FY156_14220	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FY156_14235	COG2154	pterin-4-alpha-carbinolamine dehydratase
FY156_14240	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FY156_14245	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FY156_14255	COG4181	ATPase activity
FY156_14265	COG0670	Belongs to the BI1 family
FY156_14280	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FY156_14285	COG4133	protoheme IX ABC transporter activity
FY156_14290	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FY156_14295	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FY156_14320	COG2917	probably involved in intracellular septation
FY156_14325	COG0552	protein localization to endoplasmic reticulum
FY156_14330	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FY156_14335	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FY156_14345	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FY156_14350	COG0287	Prephenate dehydrogenase
FY156_14350	COG1605	Chorismate mutase
FY156_14355	COG0228	four-way junction DNA binding
FY156_14360	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FY156_14365	COG0336	Belongs to the RNA methyltransferase TrmD family
FY156_14375	COG0335	large ribosomal subunit rRNA binding
FY156_14380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_14385	COG0765	amino acid transport
FY156_14395	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FY156_14405	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FY156_14425	COG0488	(ABC) transporter
FY156_14435	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FY156_14445	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FY156_14450	COG0142	geranyltranstransferase activity
FY156_14455	COG2885	chlorophyll binding
FY156_14460	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FY156_14465	COG2223	nitrite transmembrane transporter activity
FY156_14470	COG1349	DNA-binding transcription factor activity
FY156_14475	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FY156_14480	COG2197	response regulator
FY156_14485	COG1132	(ABC) transporter
FY156_14490	COG3459	Glycosyltransferase 36 associated
FY156_14495	COG1473	amidohydrolase
FY156_14500	COG0579	oxidoreductase
FY156_14510	COG0129	dihydroxy-acid dehydratase activity
FY156_14515	COG2084	Dehydrogenase
FY156_14520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY156_14525	COG0277	FAD linked oxidase domain protein
FY156_14530	COG2186	Transcriptional regulator
FY156_14540	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY156_14545	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY156_14550	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY156_14555	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FY156_14565	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FY156_14570	COG0495	leucyl-tRNA aminoacylation
FY156_14585	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FY156_14600	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY156_14605	COG1946	Acyl-CoA thioesterase
FY156_14610	COG0347	Belongs to the P(II) protein family
FY156_14615	COG0004	ammonium transporteR
FY156_14620	COG1674	ftsk spoiiie
FY156_14625	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FY156_14640	COG0745	RESPONSE REGULATOR receiver
FY156_14650	COG1329	Transcriptional regulator
FY156_14655	COG2902	Dehydrogenase
FY156_14660	COG2270	Major facilitator Superfamily
FY156_14670	COG0183	Belongs to the thiolase family
FY156_14675	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_14690	COG0494	nUDIX hydrolase
FY156_14700	COG0793	Belongs to the peptidase S41A family
FY156_14710	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FY156_14715	COG0799	negative regulation of ribosome biogenesis
FY156_14720	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FY156_14725	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FY156_14730	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FY156_14735	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FY156_14745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FY156_14750	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FY156_14755	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FY156_14780	COG0066	3-isopropylmalate dehydratase activity
FY156_14785	COG0473	3-isopropylmalate dehydrogenase activity
FY156_14790	COG1858	cytochrome C peroxidase
FY156_14795	COG1797	cobyrinic acid a,c-diamide synthase activity
FY156_14800	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FY156_14800	COG1648	precorrin-2 dehydrogenase activity
FY156_14805	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
FY156_14870	COG1492	cobalamin metabolic process
FY156_14885	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_14890	COG3254	rhamnose metabolic process
FY156_14895	COG0246	Mannitol dehydrogenase
FY156_14900	COG1063	alcohol dehydrogenase
FY156_14920	COG4214	carbohydrate transport
FY156_14925	COG1129	ABC transporter
FY156_14930	COG2186	Transcriptional regulator
FY156_14935	COG2721	sulfolactate sulfo-lyase activity
FY156_14940	COG0138	bifunctional purine biosynthesis protein purh
FY156_14950	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FY156_14950	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FY156_14955	COG0501	Belongs to the peptidase M48B family
FY156_14975	COG0357	Ribosomal RNA small subunit methyltransferase G
FY156_14980	COG0445	tRNA wobble uridine modification
FY156_14985	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FY156_14990	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FY156_14995	COG1981	membrane
FY156_15000	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FY156_15005	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FY156_15010	COG0424	maF-like protein
FY156_15015	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FY156_15020	COG0237	dephospho-CoA kinase activity
FY156_15030	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FY156_15035	COG3030	protein affecting phage T7 exclusion by the F plasmid
FY156_15045	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FY156_15070	COG0179	Fumarylacetoacetate (FAA) hydrolase
FY156_15085	COG0135	phosphoribosylanthranilate isomerase activity
FY156_15090	COG0133	tryptophan synthase activity
FY156_15095	COG0159	tryptophan synthase activity
FY156_15100	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FY156_15115	COG1074	ATP-dependent DNA helicase activity
FY156_15125	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FY156_15130	COG3178	'Phosphotransferase
FY156_15135	COG2205	protein histidine kinase activity
FY156_15140	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FY156_15145	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY156_15150	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FY156_15150	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY156_15155	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FY156_15160	COG0642	Histidine kinase
FY156_15165	COG0745	RESPONSE REGULATOR receiver
FY156_15170	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FY156_15180	COG1072	(Pantothenic acid kinase))
FY156_15185	COG0140	phosphoribosyl-ATP diphosphatase activity
FY156_15190	COG0107	imidazoleglycerol-phosphate synthase activity
FY156_15195	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FY156_15200	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FY156_15210	COG0131	Imidazoleglycerol-phosphate dehydratase
FY156_15215	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FY156_15220	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FY156_15230	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FY156_15245	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FY156_15255	COG1643	Atp-dependent helicase
FY156_15310	COG1072	(Pantothenic acid kinase))
FY156_15320	COG1780	Probably involved in ribonucleotide reductase function
FY156_15325	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FY156_15340	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FY156_15365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY156_15375	COG2813	Specifically methylates the guanine in position
FY156_15380	COG1185	polyribonucleotide nucleotidyltransferase activity
FY156_15385	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FY156_15390	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FY156_15395	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FY156_15400	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FY156_15400	COG3064	Membrane
FY156_15415	COG0779	Required for maturation of 30S ribosomal subunits
FY156_15420	COG2814	Major facilitator Superfamily
FY156_15425	COG2951	lytic endotransglycosylase activity
FY156_15430	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FY156_15440	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FY156_15445	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FY156_15460	COG2816	NAD+ diphosphatase activity
FY156_15465	COG1605	Chorismate mutase
FY156_15465	COG0077	Prephenate dehydratase
FY156_15470	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FY156_15475	COG3474	cytochrome
FY156_15485	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY156_15490	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FY156_15495	COG1278	Cold shock
FY156_15500	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY156_15510	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FY156_15510	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FY156_15520	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FY156_15550	COG2900	Belongs to the SlyX family
FY156_15560	COG0484	heat shock protein binding
FY156_15565	COG0443	Heat shock 70 kDa protein
FY156_15580	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FY156_15585	COG1744	ABC transporter substrate-binding protein PnrA-like
FY156_15590	COG3845	ABC transporter
FY156_15595	COG4603	Belongs to the binding-protein-dependent transport system permease family
FY156_15600	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY156_15615	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FY156_15620	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FY156_15630	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FY156_15635	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FY156_15640	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FY156_15650	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FY156_15655	COG1845	cytochrome c oxidase, subunit III
FY156_15660	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY156_15665	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FY156_15670	COG0477	Major facilitator Superfamily
FY156_15675	COG0070	glutamate synthase
FY156_15675	COG0069	glutamate synthase activity
FY156_15675	COG0067	glutamate synthase
FY156_15680	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FY156_15695	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FY156_15705	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY156_15715	COG2860	membrane
FY156_15735	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_15755	COG0848	biopolymer transport protein
FY156_15765	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY156_15780	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY156_15785	COG3454	Phosphonate metabolism
FY156_15790	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY156_15795	COG3639	organic phosphonate transmembrane transporter activity
FY156_15800	COG3639	organic phosphonate transmembrane transporter activity
FY156_15810	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FY156_15820	COG4778	phosphonate C-P lyase system protein PhnL
FY156_15825	COG4107	phosphonate C-P lyase system protein PhnK
FY156_15830	COG3627	carbon phosphorus lyase activity
FY156_15835	COG3626	phosphonate metabolism
FY156_15840	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FY156_15845	COG3624	Phosphonate C-P lyase system protein PhnG
FY156_15850	COG2188	Transcriptional regulator
FY156_15855	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FY156_15860	COG0837	glucose binding
FY156_15865	COG1803	Methylglyoxal synthase
FY156_15870	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
FY156_15875	COG4166	transmembrane transport
FY156_15880	COG4174	ABC transporter (Permease)
FY156_15885	COG4239	(ABC) transporter, permease
FY156_15890	COG4172	Belongs to the ABC transporter superfamily
FY156_15895	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_15900	COG0174	glutamine synthetase
FY156_15905	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_15910	COG3265	gluconokinase activity
FY156_15915	COG1174	glycine betaine transport
FY156_15920	COG1125	glycine betaine transport
FY156_15925	COG1174	glycine betaine transport
FY156_15930	COG1732	Glycine betaine
FY156_15940	COG1959	2 iron, 2 sulfur cluster binding
FY156_15945	COG1840	ABC-type Fe3 transport system, periplasmic component
FY156_15955	COG4269	membrane
FY156_15975	COG0697	spore germination
FY156_15990	COG0791	NLP P60 protein
FY156_16000	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FY156_16040	COG4964	Belongs to the GSP D family
FY156_16080	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FY156_16085	COG0385	Bile acid
FY156_16090	COG3757	hydrolase, family 25
FY156_16095	COG0697	spore germination
FY156_16100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY156_16110	COG1959	2 iron, 2 sulfur cluster binding
FY156_16130	COG0481	GTPase activity
FY156_16135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY156_16150	COG1396	sequence-specific DNA binding
FY156_16170	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FY156_16195	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FY156_16200	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FY156_16205	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FY156_16210	COG0515	serine threonine protein kinase
FY156_16215	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FY156_16220	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY156_16220	COG0072	phenylalanine-tRNA ligase activity
FY156_16225	COG0667	Aldo Keto reductase
FY156_16240	COG0667	Aldo Keto reductase
FY156_16245	COG4977	sequence-specific DNA binding
FY156_16270	COG1570	exodeoxyribonuclease VII activity
FY156_16275	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_16285	COG1846	Transcriptional regulator
FY156_16290	COG0697	spore germination
FY156_16295	COG2309	aminopeptidase activity
FY156_16300	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FY156_16305	COG1393	Belongs to the ArsC family
FY156_16315	COG0519	Catalyzes the synthesis of GMP from XMP
FY156_16315	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FY156_16330	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
FY156_16360	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FY156_16370	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FY156_16380	COG1968	undecaprenyl-diphosphatase activity
FY156_16395	COG0284	orotidine-5'-phosphate decarboxylase activity
FY156_16405	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FY156_16415	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FY156_16420	COG0792	nuclease activity
FY156_16435	COG1175	transmembrane transport
FY156_16440	COG0395	ABC-type sugar transport system, permease component
FY156_16445	COG3842	ATPase activity
FY156_16455	COG0189	ligase activity
FY156_16465	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FY156_16475	COG0756	dUTP diphosphatase activity
FY156_16480	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FY156_16485	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FY156_16495	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FY156_16500	COG2226	methyltransferase
FY156_16505	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FY156_16510	COG1024	Enoyl-CoA hydratase
FY156_16515	COG0268	Binds directly to 16S ribosomal RNA
FY156_16575	COG2226	methyltransferase
FY156_16640	COG3550	peptidyl-serine autophosphorylation
FY156_16670	COG4191	Histidine kinase
FY156_16670	COG0784	Response regulator, receiver
FY156_16675	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FY156_16710	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FY156_16785	COG0583	DNA-binding transcription factor activity
FY156_16790	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY156_16800	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY156_16805	COG2084	Dehydrogenase
FY156_16830	COG2267	carboxylic ester hydrolase activity
FY156_16875	COG0583	DNA-binding transcription factor activity
FY156_16880	COG1902	pentaerythritol trinitrate reductase activity
FY156_16885	COG0583	DNA-binding transcription factor activity
FY156_16890	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_16895	COG1252	NADH dehydrogenase
FY156_16900	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_16910	COG1335	isochorismatase
FY156_16915	COG0583	DNA-binding transcription factor activity
FY156_16935	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FY156_16940	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FY156_16945	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FY156_17045	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FY156_17060	COG3706	GGDEF domain
FY156_17075	COG1609	Transcriptional regulator
FY156_17100	COG0328	RNA-DNA hybrid ribonuclease activity
FY156_17105	COG3842	ATPase activity
FY156_17110	COG0673	inositol 2-dehydrogenase activity
FY156_17115	COG0673	inositol 2-dehydrogenase activity
FY156_17120	COG0395	ABC-type sugar transport system, permease component
FY156_17125	COG1175	transmembrane transport
FY156_17135	COG1309	transcriptional regulator
FY156_17140	COG0673	inositol 2-dehydrogenase activity
FY156_17165	COG0584	glycerophosphoryl diester phosphodiesterase
FY156_17180	COG4608	Belongs to the ABC transporter superfamily
FY156_17185	COG0444	Belongs to the ABC transporter superfamily
FY156_17190	COG0747	negative chemotaxis
FY156_17205	COG1136	(ABC) transporter
FY156_17205	COG0577	efflux transmembrane transporter activity
FY156_17210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_17240	COG1063	alcohol dehydrogenase
FY156_17245	COG3284	Transcriptional regulator
FY156_17250	COG1473	amidohydrolase
FY156_17265	COG1629	transport
FY156_17275	COG3609	addiction module antidote protein, CC2985 family
FY156_17280	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FY156_17295	COG3842	ATPase activity
FY156_17300	COG0395	ABC-type sugar transport system, permease component
FY156_17305	COG1175	transmembrane transport
FY156_17325	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY156_17330	COG3618	amidohydrolase
FY156_17335	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_17340	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_17345	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_17350	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
FY156_17355	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY156_17360	COG2186	Transcriptional regulator
FY156_17385	COG0395	ABC-type sugar transport system, permease component
FY156_17405	COG1115	amino acid carrier protein
FY156_17415	COG2223	nitrite transmembrane transporter activity
FY156_17425	COG0395	ABC-type sugar transport system, permease component
FY156_17435	COG2182	Extracellular solute-binding protein
FY156_17440	COG0626	cystathionine gamma-synthase activity
FY156_17445	COG2186	Transcriptional regulator
FY156_17490	COG0842	Transport permease protein
FY156_17495	COG0842	Transport permease protein
FY156_17495	COG1129	ABC transporter
FY156_17500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_17505	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY156_17525	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY156_17550	COG0583	DNA-binding transcription factor activity
FY156_17565	COG0483	inositol monophosphate 1-phosphatase activity
FY156_17575	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY156_17605	COG2814	Major facilitator Superfamily
FY156_17615	COG1486	melibiose metabolic process
FY156_17620	COG4172	Belongs to the ABC transporter superfamily
FY156_17625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_17630	COG0601	transmembrane transport
FY156_17635	COG0747	negative chemotaxis
FY156_17640	COG1486	melibiose metabolic process
FY156_17665	COG1940	carbohydrate kinase activity
FY156_17670	COG2182	Extracellular solute-binding protein
FY156_17675	COG1175	transmembrane transport
FY156_17680	COG0395	ABC-type sugar transport system, permease component
FY156_17685	COG0165	Argininosuccinate lyase
FY156_17690	COG3842	ATPase activity
FY156_17695	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY156_17700	COG3119	arylsulfatase activity
FY156_17710	COG0583	DNA-binding transcription factor activity
FY156_17715	COG1012	belongs to the aldehyde dehydrogenase family
FY156_17750	COG1120	ATPase activity
FY156_17755	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_17760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_17775	COG2207	Transcriptional regulator
FY156_17785	COG1392	Phosphate transport regulator
FY156_17790	COG0306	phosphate transporter
FY156_17795	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_17800	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FY156_17805	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_17815	COG5001	Diguanylate cyclase
FY156_17815	COG3300	MHYT domain
FY156_17820	COG4774	siderophore transport
FY156_17825	COG1120	ATPase activity
FY156_17830	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_17835	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_17850	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
FY156_17855	COG1088	dTDP-glucose 4,6-dehydratase activity
FY156_17860	COG1091	dTDP-4-dehydrorhamnose reductase activity
FY156_17865	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FY156_17875	COG1215	transferase activity, transferring glycosyl groups
FY156_17895	COG1132	(ABC) transporter
FY156_17910	COG3712	iron ion homeostasis
FY156_17915	COG4774	siderophore transport
FY156_17920	COG2814	Major facilitator Superfamily
FY156_17940	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FY156_17955	COG1175	transmembrane transport
FY156_17960	COG0395	ABC-type sugar transport system, permease component
FY156_17965	COG1609	Transcriptional regulator
FY156_17980	COG2819	hydrolase of the alpha beta superfamily
FY156_17995	COG4592	Periplasmic binding protein
FY156_18000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_18005	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_18010	COG1120	ATPase activity
FY156_18015	COG1473	amidohydrolase
FY156_18020	COG2271	Major facilitator Superfamily
FY156_18030	COG3836	Belongs to the HpcH HpaI aldolase family
FY156_18035	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_18070	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY156_18095	COG0395	ABC-type sugar transport system, permease component
FY156_18100	COG1175	transmembrane transport
FY156_18135	COG1126	abc transporter atp-binding protein
FY156_18140	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_18145	COG1609	Transcriptional regulator
FY156_18155	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY156_18170	COG0583	DNA-binding transcription factor activity
FY156_18175	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FY156_18180	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FY156_18185	COG3485	protocatechuate 3,4-dioxygenase
FY156_18190	COG3485	protocatechuate 3,4-dioxygenase
FY156_18195	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FY156_18200	COG0765	amino acid transport
FY156_18205	COG0765	amino acid transport
FY156_18210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_18215	COG1126	abc transporter atp-binding protein
FY156_18220	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FY156_18225	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FY156_18240	COG0683	leucine binding
FY156_18265	COG1737	Transcriptional regulator
FY156_18275	COG3962	Belongs to the TPP enzyme family
FY156_18285	COG3718	enzyme involved in inositol metabolism
FY156_18300	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_18305	COG1129	ABC transporter
FY156_18315	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_18320	COG0765	amino acid transport
FY156_18325	COG1126	abc transporter atp-binding protein
FY156_18340	COG0395	ABC-type sugar transport system, permease component
FY156_18345	COG1175	transmembrane transport
FY156_18355	COG1609	Transcriptional regulator
FY156_18365	COG1126	abc transporter atp-binding protein
FY156_18370	COG0765	amino acid transport
FY156_18375	COG4597	amino acid ABC transporter
FY156_18380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_18385	COG0626	cystathionine gamma-synthase activity
FY156_18390	COG0583	DNA-binding transcription factor activity
FY156_18400	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FY156_18405	COG1473	amidohydrolase
FY156_18410	COG0747	negative chemotaxis
FY156_18430	COG0601	transmembrane transport
FY156_18440	COG1446	asparaginase
FY156_18455	COG0747	negative chemotaxis
FY156_18470	COG4172	Belongs to the ABC transporter superfamily
FY156_18475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_18480	COG0601	transmembrane transport
FY156_18490	COG1120	ATPase activity
FY156_18495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_18510	COG2226	methyltransferase
FY156_18515	COG2226	methyltransferase
FY156_18525	COG1120	ATPase activity
FY156_18530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_18540	COG1959	2 iron, 2 sulfur cluster binding
FY156_18550	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY156_18555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_18570	COG2897	thiosulfate sulfurtransferase activity
FY156_18580	COG1960	acyl-CoA dehydrogenase activity
FY156_18615	COG0667	Aldo Keto reductase
FY156_18625	COG0583	DNA-binding transcription factor activity
FY156_18630	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_18645	COG0747	negative chemotaxis
FY156_18650	COG1473	amidohydrolase
FY156_18655	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_18660	COG0702	epimerase
FY156_18670	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_18680	COG0006	proline dipeptidase activity
FY156_18690	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY156_18695	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY156_18700	COG1802	Transcriptional regulator
FY156_18705	COG1984	allophanate hydrolase subunit 2
FY156_18710	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FY156_18715	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FY156_18735	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY156_18760	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_18775	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FY156_18780	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FY156_18790	COG0022	dehydrogenase e1 component
FY156_18800	COG1960	acyl-CoA dehydrogenase activity
FY156_18815	COG1960	acyl-CoA dehydrogenase activity
FY156_18820	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FY156_18835	COG1024	Enoyl-CoA hydratase
FY156_18840	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FY156_18845	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FY156_18875	COG3842	ATPase activity
FY156_18890	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FY156_18905	COG0395	ABC-type sugar transport system, permease component
FY156_18920	COG3842	ATPase activity
FY156_18935	COG1785	Belongs to the alkaline phosphatase family
FY156_18945	COG1136	(ABC) transporter
FY156_18960	COG4952	isomerase
FY156_18965	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_18965	COG3347	Dehydrogenase
FY156_18970	COG1349	DNA-binding transcription factor activity
FY156_18975	COG1879	ABC-type sugar transport system periplasmic component
FY156_18980	COG1129	ABC transporter
FY156_18990	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_18995	COG3254	rhamnose metabolic process
FY156_19015	COG1063	alcohol dehydrogenase
FY156_19020	COG5383	Protein conserved in bacteria
FY156_19025	COG1012	belongs to the aldehyde dehydrogenase family
FY156_19030	COG0436	Aminotransferase
FY156_19040	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FY156_19045	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY156_19060	COG0346	lactoylglutathione lyase activity
FY156_19065	COG0583	DNA-binding transcription factor activity
FY156_19100	COG0835	chemotaxis
FY156_19105	COG0840	transmembrane signaling receptor activity
FY156_19110	COG0835	chemotaxis
FY156_19115	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FY156_19120	COG2201	protein-glutamate methylesterase activity
FY156_19125	COG1192	Involved in chromosome partitioning
FY156_19135	COG2072	flavoprotein involved in K transport
FY156_19155	COG3842	ATPase activity
FY156_19160	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY156_19180	COG2186	Transcriptional regulator
FY156_19185	COG0601	transmembrane transport
FY156_19190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_19195	COG0444	Belongs to the ABC transporter superfamily
FY156_19200	COG4608	Belongs to the ABC transporter superfamily
FY156_19220	COG3386	PFAM SMP-30 Gluconolaconase
FY156_19230	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_19235	COG1129	ABC transporter
FY156_19240	COG1879	ABC-type sugar transport system periplasmic component
FY156_19245	COG4585	Histidine kinase
FY156_19250	COG2197	response regulator
FY156_19255	COG0583	DNA-binding transcription factor activity
FY156_19265	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_19290	COG4191	Histidine kinase
FY156_19305	COG1686	Belongs to the peptidase S11 family
FY156_19310	COG4702	Belongs to the UPF0303 family
FY156_19315	COG1902	pentaerythritol trinitrate reductase activity
FY156_19320	COG0640	Transcriptional regulator
FY156_19325	COG0583	DNA-binding transcription factor activity
FY156_19345	COG0165	Argininosuccinate lyase
FY156_19365	COG2079	MmgE PrpD family protein
FY156_19395	COG0673	inositol 2-dehydrogenase activity
FY156_19405	COG1609	Transcriptional regulator
FY156_19410	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_19415	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_19420	COG1129	ABC transporter
FY156_19425	COG1879	ABC-type sugar transport system periplasmic component
FY156_19435	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FY156_19440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_19445	COG2274	protein secretion by the type I secretion system
FY156_19455	COG1538	Outer membrane efflux protein
FY156_19465	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_19475	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_19485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_19490	COG0601	transmembrane transport
FY156_19510	COG2807	transmembrane transport
FY156_19520	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_19525	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_19530	COG4592	Periplasmic binding protein
FY156_19535	COG1120	ATPase activity
FY156_19540	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_19560	COG2186	Transcriptional regulator
FY156_19565	COG1027	Aspartate ammonia-lyase
FY156_19575	COG0252	asparaginase activity
FY156_19580	COG1595	DNA-templated transcription, initiation
FY156_19590	COG4774	siderophore transport
FY156_19600	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_19610	COG0577	efflux transmembrane transporter activity
FY156_19635	COG0601	transmembrane transport
FY156_19675	COG1609	Transcriptional regulator
FY156_19685	COG3842	ATPase activity
FY156_19700	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY156_19705	COG1472	Belongs to the glycosyl hydrolase 3 family
FY156_19710	COG0583	DNA-binding transcription factor activity
FY156_19715	COG2072	flavoprotein involved in K transport
FY156_19760	COG0628	permease
FY156_19770	COG2235	arginine
FY156_19790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_19855	COG1473	amidohydrolase
FY156_19870	COG1012	belongs to the aldehyde dehydrogenase family
FY156_19875	COG0673	inositol 2-dehydrogenase activity
FY156_19880	COG0583	DNA-binding transcription factor activity
FY156_19930	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_19935	COG2186	Transcriptional regulator
FY156_19945	COG1129	ABC transporter
FY156_19960	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_19965	COG0583	DNA-binding transcription factor activity
FY156_19975	COG0778	Nitroreductase
FY156_19995	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY156_20040	COG1929	Belongs to the glycerate kinase type-1 family
FY156_20065	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_20070	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY156_20075	COG3842	ATPase activity
FY156_20085	COG0277	FAD linked oxidase domain protein
FY156_20090	COG0210	DNA helicase
FY156_20105	COG4215	(ABC) transporter
FY156_20110	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_20135	COG1063	alcohol dehydrogenase
FY156_20140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_20155	COG0583	DNA-binding transcription factor activity
FY156_20160	COG0596	Alpha beta hydrolase
FY156_20170	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FY156_20175	COG0583	DNA-binding transcription factor activity
FY156_20180	COG0667	Aldo Keto reductase
FY156_20190	COG1278	Cold shock
FY156_20200	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_20215	COG4774	siderophore transport
FY156_20220	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FY156_20240	COG3188	usher protein
FY156_20250	COG3698	Phosphodiester glycosidase
FY156_20265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_20275	COG0747	negative chemotaxis
FY156_20295	COG4172	Belongs to the ABC transporter superfamily
FY156_20300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_20305	COG0601	transmembrane transport
FY156_20310	COG4166	transmembrane transport
FY156_20320	COG3443	Belongs to the bacterial solute-binding protein 9 family
FY156_20330	COG2376	Dihydroxyacetone kinase
FY156_20340	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY156_20345	COG1522	sequence-specific DNA binding
FY156_20380	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_20385	COG1309	transcriptional regulator
FY156_20395	COG4638	Rieske (2fe-2S)
FY156_20405	COG0625	glutathione transferase activity
FY156_20420	COG3845	ABC transporter
FY156_20425	COG4603	Belongs to the binding-protein-dependent transport system permease family
FY156_20430	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY156_20445	COG2233	PERMEase
FY156_20500	COG4774	siderophore transport
FY156_20520	COG1116	anion transmembrane transporter activity
FY156_20535	COG0583	DNA-binding transcription factor activity
FY156_20540	COG0402	S-adenosylhomocysteine deaminase activity
FY156_20545	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FY156_20550	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FY156_20560	COG0583	DNA-binding transcription factor activity
FY156_20565	COG1024	Enoyl-CoA hydratase
FY156_20570	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FY156_20580	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_20585	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FY156_20590	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY156_20630	COG0739	heme binding
FY156_20630	COG0741	lytic transglycosylase activity
FY156_20630	COG1196	nuclear chromosome segregation
FY156_20635	COG0542	response to heat
FY156_20645	COG2890	protein-(glutamine-N5) methyltransferase activity
FY156_20650	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FY156_20660	COG0527	aspartate kinase activity
FY156_20665	COG0513	Belongs to the DEAD box helicase family
FY156_20675	COG0019	diaminopimelate decarboxylase activity
FY156_20690	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FY156_20710	COG0784	Response regulator, receiver
FY156_20725	COG1522	sequence-specific DNA binding
FY156_20735	COG1116	anion transmembrane transporter activity
FY156_20740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_20745	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY156_20750	COG0583	DNA-binding transcription factor activity
FY156_20755	COG0400	carboxylic ester hydrolase activity
FY156_20760	COG0435	Glutathione S-transferase
FY156_20770	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FY156_20775	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY156_20785	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_20790	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FY156_20810	COG0559	Belongs to the binding-protein-dependent transport system permease family
FY156_20835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_20845	COG1802	Transcriptional regulator
FY156_20850	COG0246	Mannitol dehydrogenase
FY156_20855	COG4608	Belongs to the ABC transporter superfamily
FY156_20860	COG0444	Belongs to the ABC transporter superfamily
FY156_20865	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_20870	COG0601	transmembrane transport
FY156_20875	COG0747	negative chemotaxis
FY156_20880	COG0006	proline dipeptidase activity
FY156_20885	COG4221	oxidoreductase activity
FY156_20915	COG0539	negative regulation of cytoplasmic translation
FY156_20920	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FY156_20955	COG2226	methyltransferase
FY156_20965	COG5001	Diguanylate cyclase
FY156_20965	COG3300	MHYT domain
FY156_20980	COG3108	Peptidase M15
FY156_20985	COG2204	response regulator
FY156_20990	COG1164	Oligoendopeptidase f
FY156_20995	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY156_21005	COG5310	Homospermidine synthase
FY156_21015	COG0737	Belongs to the 5'-nucleotidase family
FY156_21020	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FY156_21025	COG0330	HflC and HflK could
FY156_21050	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FY156_21055	COG2951	lytic endotransglycosylase activity
FY156_21080	COG0069	glutamate synthase activity
FY156_21080	COG0070	glutamate synthase
FY156_21080	COG0067	glutamate synthase
FY156_21100	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FY156_21125	COG3474	cytochrome
FY156_21130	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FY156_21135	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY156_21140	COG1845	cytochrome c oxidase, subunit III
FY156_21145	COG1845	cytochrome c oxidase, subunit III
FY156_21160	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_21165	COG0436	Aminotransferase
FY156_21180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_21185	COG0765	amino acid transport
FY156_21195	COG1126	abc transporter atp-binding protein
FY156_21205	COG2186	Transcriptional regulator
FY156_21210	COG0483	inositol monophosphate 1-phosphatase activity
FY156_21215	COG0584	glycerophosphoryl diester phosphodiesterase
FY156_21220	COG3842	ATPase activity
FY156_21225	COG0395	ABC-type sugar transport system, permease component
FY156_21230	COG1175	transmembrane transport
FY156_21235	COG1653	transport
FY156_21240	COG1940	carbohydrate kinase activity
FY156_21260	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FY156_21270	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FY156_21270	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FY156_21290	COG0783	Belongs to the Dps family
FY156_21295	COG0243	molybdopterin cofactor binding
FY156_21320	COG4566	intracellular signal transduction
FY156_21325	COG4566	intracellular signal transduction
FY156_21340	COG2140	Oxalate decarboxylase
FY156_21345	COG2814	Major facilitator Superfamily
FY156_21380	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FY156_21420	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_21430	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_21440	COG0747	negative chemotaxis
FY156_21450	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY156_21455	COG1454	alcohol dehydrogenase
FY156_21470	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_21475	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FY156_21485	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_21495	COG1879	ABC-type sugar transport system periplasmic component
FY156_21505	COG1063	alcohol dehydrogenase
FY156_21515	COG3842	ATPase activity
FY156_21525	COG1177	transmembrane transport
FY156_21530	COG0402	S-adenosylhomocysteine deaminase activity
FY156_21545	COG0402	S-adenosylhomocysteine deaminase activity
FY156_21550	COG1309	transcriptional regulator
FY156_21555	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY156_21560	COG1126	abc transporter atp-binding protein
FY156_21565	COG0765	amino acid transport
FY156_21600	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY156_21605	COG1802	Transcriptional regulator
FY156_21610	COG3842	ATPase activity
FY156_21615	COG4209	transmembrane transport
FY156_21620	COG0395	ABC-type sugar transport system, permease component
FY156_21625	COG1653	transport
FY156_21635	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_21645	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY156_21655	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_21660	COG4172	Belongs to the ABC transporter superfamily
FY156_21665	COG1921	L-seryl-tRNASec selenium transferase activity
FY156_21680	COG3964	amidohydrolase
FY156_21690	COG0601	transmembrane transport
FY156_21695	COG0747	negative chemotaxis
FY156_21710	COG4774	siderophore transport
FY156_21720	COG1120	ATPase activity
FY156_21730	COG1959	2 iron, 2 sulfur cluster binding
FY156_21735	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_21740	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY156_21760	COG1595	DNA-templated transcription, initiation
FY156_21765	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY156_21780	COG0583	DNA-binding transcription factor activity
FY156_21785	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FY156_21790	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FY156_21795	COG3639	organic phosphonate transmembrane transporter activity
FY156_21800	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
FY156_21800	COG2273	Hydrolase Family 16
FY156_21805	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_21810	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY156_21820	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FY156_21830	COG1464	Belongs to the NlpA lipoprotein family
FY156_21860	COG0583	DNA-binding transcription factor activity
FY156_21865	COG4771	TonB-dependent receptor
FY156_21870	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY156_21885	COG1414	Transcriptional regulator
FY156_21890	COG1475	DNA binding
FY156_21895	COG1192	Involved in chromosome partitioning
FY156_21925	COG0596	Alpha beta hydrolase
FY156_21930	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FY156_21940	COG2986	histidine ammonia-lyase
FY156_21945	COG1228	amidohydrolase
FY156_21950	COG0402	S-adenosylhomocysteine deaminase activity
FY156_22000	COG0596	Alpha beta hydrolase
FY156_22010	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FY156_22025	COG1126	abc transporter atp-binding protein
FY156_22030	COG0765	amino acid transport
FY156_22035	COG0765	amino acid transport
FY156_22040	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_22045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_22050	COG1012	belongs to the aldehyde dehydrogenase family
FY156_22055	COG3938	Belongs to the proline racemase family
FY156_22065	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_22080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_22095	COG0601	transmembrane transport
FY156_22100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_22105	COG4172	Belongs to the ABC transporter superfamily
FY156_22110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY156_22150	COG0183	Belongs to the thiolase family
FY156_22155	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FY156_22165	COG1414	Transcriptional regulator
FY156_22170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_22180	COG0511	ligase activity, forming carbon-carbon bonds
FY156_22200	COG1984	allophanate hydrolase subunit 2
FY156_22205	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FY156_22220	COG4221	oxidoreductase activity
FY156_22225	COG0765	amino acid transport
FY156_22230	COG0765	amino acid transport
FY156_22240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_22245	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY156_22250	COG1126	abc transporter atp-binding protein
FY156_22255	COG0488	(ABC) transporter
FY156_22260	COG1414	Transcriptional regulator
FY156_22270	COG1454	alcohol dehydrogenase
FY156_22275	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY156_22285	COG2814	Major facilitator Superfamily
FY156_22290	COG4771	TonB-dependent receptor
FY156_22300	COG4592	Periplasmic binding protein
FY156_22305	COG1120	ATPase activity
FY156_22310	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_22315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_22335	COG0583	DNA-binding transcription factor activity
FY156_22360	COG0785	Cytochrome C biogenesis protein
FY156_22360	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FY156_22375	COG2205	protein histidine kinase activity
FY156_22380	COG1764	response to oxidative stress
FY156_22385	COG1012	belongs to the aldehyde dehydrogenase family
FY156_22390	COG0583	DNA-binding transcription factor activity
FY156_22410	COG0612	Peptidase, M16
FY156_22460	COG0277	FAD linked oxidase domain protein
FY156_22465	COG0488	(ABC) transporter
FY156_22480	COG2308	Evidence 4 Homologs of previously reported genes of
FY156_22480	COG2307	Protein conserved in bacteria
FY156_22560	COG0010	Belongs to the arginase family
FY156_22570	COG0697	spore germination
FY156_22575	COG4770	biotin carboxylase activity
FY156_22580	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FY156_22585	COG4336	lyase activity
FY156_22590	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FY156_22595	COG1914	H( )-stimulated, divalent metal cation uptake system
FY156_22600	COG1802	Transcriptional regulator
FY156_22605	COG3707	response regulator
FY156_22615	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY156_22620	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_22625	COG1116	anion transmembrane transporter activity
FY156_22630	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FY156_22640	COG0243	molybdopterin cofactor binding
FY156_22645	COG1648	precorrin-2 dehydrogenase activity
FY156_22645	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FY156_22650	COG0745	RESPONSE REGULATOR receiver
FY156_22655	COG2205	protein histidine kinase activity
FY156_22680	COG0450	alkyl hydroperoxide reductase
FY156_22695	COG0071	Belongs to the small heat shock protein (HSP20) family
FY156_22715	COG0483	inositol monophosphate 1-phosphatase activity
FY156_22735	COG0840	transmembrane signaling receptor activity
FY156_22740	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FY156_22745	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FY156_22760	COG3842	ATPase activity
FY156_22765	COG1177	transmembrane transport
FY156_22770	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY156_22780	COG1733	regulation of RNA biosynthetic process
FY156_22785	COG2910	NAD(P)H-binding
FY156_22795	COG0673	inositol 2-dehydrogenase activity
FY156_22815	COG0477	Major facilitator Superfamily
FY156_22830	COG2194	sulfuric ester hydrolase activity
FY156_22835	COG0583	DNA-binding transcription factor activity
FY156_22840	COG4774	siderophore transport
FY156_22845	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FY156_22855	COG1120	ATPase activity
FY156_22870	COG2137	regulation of response to DNA damage stimulus
FY156_22875	COG2133	pyrroloquinoline quinone binding
FY156_22885	COG0500	methyltransferase
FY156_22890	COG0564	pseudouridine synthase activity
FY156_22905	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY156_22910	COG3206	protein involved in exopolysaccharide biosynthesis
FY156_22910	COG0489	protein tyrosine kinase activity
FY156_22915	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FY156_22920	COG1215	transferase activity, transferring glycosyl groups
FY156_22925	COG1215	transferase activity, transferring glycosyl groups
FY156_22930	COG1215	transferase activity, transferring glycosyl groups
FY156_22935	COG0438	transferase activity, transferring glycosyl groups
FY156_22940	COG2273	Hydrolase Family 16
FY156_22945	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FY156_22950	COG2244	polysaccharide biosynthetic process
FY156_22955	COG0463	Glycosyl transferase, family 2
FY156_22960	COG2327	Polysaccharide pyruvyl transferase
FY156_22965	COG1215	transferase activity, transferring glycosyl groups
FY156_22985	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FY156_22990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_23000	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY156_23000	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY156_23030	COG0033	Phosphoglucomutase
FY156_23035	COG0297	glycogen (starch) synthase activity
FY156_23040	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FY156_23045	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FY156_23050	COG0058	SHG alpha-glucan phosphorylase activity
FY156_23060	COG1794	racemase activity, acting on amino acids and derivatives
FY156_23065	COG1522	sequence-specific DNA binding
FY156_23070	COG2084	Dehydrogenase
FY156_23075	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_23090	COG4988	ABC transporter
FY156_23095	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FY156_23105	COG1294	oxidase, subunit
FY156_23115	COG0252	asparaginase activity
FY156_23140	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FY156_23145	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FY156_23160	COG0469	pyruvate kinase activity
FY156_23180	COG3750	Belongs to the UPF0335 family
FY156_23185	COG0457	Tetratricopeptide repeat
FY156_23190	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FY156_23195	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FY156_23200	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FY156_23230	COG0483	inositol monophosphate 1-phosphatase activity
FY156_23250	COG1132	(ABC) transporter
FY156_23255	COG0254	rRNA binding
FY156_23275	COG3588	fructose-bisphosphate aldolase
FY156_23280	COG0126	phosphoglycerate kinase activity
FY156_23315	COG1253	flavin adenine dinucleotide binding
FY156_23320	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FY156_23325	COG1692	metallophosphoesterase
FY156_23340	COG0217	transcriptional regulatory protein
FY156_23345	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_23350	COG0840	transmembrane signaling receptor activity
FY156_23355	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FY156_23360	COG0632	four-way junction helicase activity
FY156_23365	COG2255	four-way junction helicase activity
FY156_23375	COG0494	nUDIX hydrolase
FY156_23385	COG0824	Thioesterase
FY156_23405	COG0823	Involved in the tonB-independent uptake of proteins
FY156_23410	COG2885	chlorophyll binding
FY156_23420	COG0037	tRNA processing
FY156_23425	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FY156_23430	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FY156_23445	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY156_23460	COG0482	sulfurtransferase activity
FY156_23525	COG0629	single-stranded DNA binding
FY156_23655	COG0740	serine-type endopeptidase activity
FY156_23815	COG2835	tetraacyldisaccharide 4'-kinase activity
FY156_23820	COG2373	Large extracellular alpha-helical protein
FY156_23825	COG4953	penicillin-binding protein 1C
FY156_23845	COG1473	amidohydrolase
FY156_23935	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FY156_24045	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FY156_24050	COG1686	Belongs to the peptidase S11 family
FY156_24055	COG0523	cobalamin synthesis protein
FY156_24065	COG3034	peptidoglycan biosynthetic process
FY156_24070	COG0825	malonyl-CoA metabolic process
FY156_24075	COG4974	Belongs to the 'phage' integrase family
FY156_24085	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FY156_24090	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FY156_24120	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FY156_24125	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FY156_24140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY156_24145	COG2226	methyltransferase
FY156_24150	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FY156_24155	COG0287	Prephenate dehydrogenase
FY156_24165	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FY156_24185	COG2884	Cell division ATP-binding protein ftsE
FY156_24215	COG0019	diaminopimelate decarboxylase activity
FY156_24225	COG0165	Argininosuccinate lyase
FY156_24230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FY156_24235	COG1250	3-hydroxyacyl-CoA dehydrogenase
FY156_24245	COG2086	electron transfer activity
FY156_24265	COG0300	oxidoreductase activity
FY156_24275	COG2354	Protein conserved in bacteria
FY156_24285	COG0747	negative chemotaxis
FY156_24290	COG0601	transmembrane transport
FY156_24295	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_24300	COG4608	Belongs to the ABC transporter superfamily
FY156_24305	COG0444	Belongs to the ABC transporter superfamily
FY156_24320	COG1473	amidohydrolase
FY156_24325	COG4608	Belongs to the ABC transporter superfamily
FY156_24330	COG0444	Belongs to the ABC transporter superfamily
FY156_24335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_24340	COG0601	transmembrane transport
FY156_24345	COG0747	negative chemotaxis
FY156_24370	COG1129	ABC transporter
FY156_24375	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_24390	COG0572	uridine kinase
FY156_24395	COG1082	Xylose isomerase domain protein TIM barrel
FY156_24400	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_24405	COG0583	DNA-binding transcription factor activity
FY156_24410	COG3706	GGDEF domain
FY156_24420	COG3734	2-keto-3-deoxy-galactonokinase
FY156_24425	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_24430	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_24440	COG1175	transmembrane transport
FY156_24445	COG0395	ABC-type sugar transport system, permease component
FY156_24450	COG3842	ATPase activity
FY156_24455	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FY156_24460	COG1414	Transcriptional regulator
FY156_24465	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_24475	COG3685	Protein conserved in bacteria
FY156_24480	COG4251	negative regulation of phosphorylation
FY156_24485	COG0784	Response regulator, receiver
FY156_24490	COG3920	Histidine kinase
FY156_24490	COG2202	Pas domain
FY156_24495	COG0784	Response regulator, receiver
FY156_24500	COG5002	protein histidine kinase activity
FY156_24500	COG2198	Histidine kinase
FY156_24500	COG0784	Response regulator, receiver
FY156_24520	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY156_24525	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY156_24530	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY156_24540	COG0583	DNA-binding transcription factor activity
FY156_24545	COG2985	domain, Protein
FY156_24555	COG0617	tRNA 3'-terminal CCA addition
FY156_24555	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FY156_24555	COG0517	IMP dehydrogenase activity
FY156_24570	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FY156_24575	COG4178	(ABC) transporter
FY156_24580	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_24595	COG0189	ligase activity
FY156_24615	COG3237	CsbD-like
FY156_24620	COG1285	pathogenesis
FY156_24640	COG2986	histidine ammonia-lyase
FY156_24665	COG0517	IMP dehydrogenase activity
FY156_24665	COG1125	glycine betaine transport
FY156_24675	COG1653	transport
FY156_24680	COG1175	transmembrane transport
FY156_24685	COG0395	ABC-type sugar transport system, permease component
FY156_24695	COG3842	ATPase activity
FY156_24700	COG1737	Transcriptional regulator
FY156_24730	COG0583	DNA-binding transcription factor activity
FY156_24735	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_24750	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FY156_24755	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FY156_24765	COG0477	Major facilitator Superfamily
FY156_24775	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FY156_24780	COG0363	glucosamine-6-phosphate deaminase activity
FY156_24785	COG1940	carbohydrate kinase activity
FY156_24790	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
FY156_24795	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_24800	COG4608	Belongs to the ABC transporter superfamily
FY156_24805	COG0444	Belongs to the ABC transporter superfamily
FY156_24820	COG2186	Transcriptional regulator
FY156_24840	COG3386	PFAM SMP-30 Gluconolaconase
FY156_24845	COG0840	transmembrane signaling receptor activity
FY156_24850	COG0583	DNA-binding transcription factor activity
FY156_24860	COG1609	Transcriptional regulator
FY156_24885	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY156_24895	COG1228	amidohydrolase
FY156_24905	COG1802	Transcriptional regulator
FY156_24910	COG0747	negative chemotaxis
FY156_24915	COG0601	transmembrane transport
FY156_24920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_24930	COG0402	S-adenosylhomocysteine deaminase activity
FY156_24935	COG0444	Belongs to the ABC transporter superfamily
FY156_24940	COG4608	Belongs to the ABC transporter superfamily
FY156_24950	COG1609	Transcriptional regulator
FY156_24955	COG0673	inositol 2-dehydrogenase activity
FY156_24970	COG1175	transmembrane transport
FY156_24985	COG4608	Belongs to the ABC transporter superfamily
FY156_24990	COG0444	Belongs to the ABC transporter superfamily
FY156_24995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_25000	COG0601	transmembrane transport
FY156_25010	COG1802	Transcriptional regulator
FY156_25015	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_25020	COG4948	Mandelate Racemase Muconate Lactonizing
FY156_25030	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_25035	COG1116	anion transmembrane transporter activity
FY156_25040	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_25045	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY156_25065	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FY156_25075	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_25080	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_25090	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FY156_25095	COG2267	carboxylic ester hydrolase activity
FY156_25115	COG4589	Belongs to the CDS family
FY156_25130	COG4993	Dehydrogenase
FY156_25135	COG0583	DNA-binding transcription factor activity
FY156_25140	COG0598	Magnesium transport protein CorA
FY156_25150	COG3158	transport of potassium into the cell
FY156_25160	COG0028	Belongs to the TPP enzyme family
FY156_25165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_25175	COG1126	abc transporter atp-binding protein
FY156_25180	COG0765	amino acid transport
FY156_25190	COG0583	DNA-binding transcription factor activity
FY156_25195	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_25200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_25205	COG1473	amidohydrolase
FY156_25215	COG1126	abc transporter atp-binding protein
FY156_25220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_25225	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FY156_25255	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_25260	COG4172	Belongs to the ABC transporter superfamily
FY156_25265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_25270	COG0601	transmembrane transport
FY156_25275	COG0747	negative chemotaxis
FY156_25280	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FY156_25290	COG3800	Transcriptional regulator
FY156_25290	COG1396	sequence-specific DNA binding
FY156_25295	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FY156_25300	COG0625	glutathione transferase activity
FY156_25310	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
FY156_25315	COG4770	biotin carboxylase activity
FY156_25320	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FY156_25320	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FY156_25325	COG0346	lactoylglutathione lyase activity
FY156_25340	COG4213	ABC transporter substrate-binding protein
FY156_25345	COG4214	carbohydrate transport
FY156_25350	COG1129	ABC transporter
FY156_25400	COG0653	protein targeting
FY156_25405	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FY156_25410	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FY156_25420	COG0494	nUDIX hydrolase
FY156_25435	COG2226	methyltransferase
FY156_25445	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FY156_25450	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY156_25465	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY156_25485	COG4150	thiosulfate binding
FY156_25495	COG4208	sulfate ABC transporter
FY156_25500	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY156_25505	COG4335	DNA alkylation repair
FY156_25515	COG0840	transmembrane signaling receptor activity
FY156_25520	COG1960	acyl-CoA dehydrogenase activity
FY156_25525	COG0583	DNA-binding transcription factor activity
FY156_25530	COG1609	Transcriptional regulator
FY156_25540	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY156_25550	COG3842	ATPase activity
FY156_25560	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FY156_25575	COG0583	DNA-binding transcription factor activity
FY156_25580	COG2814	Major facilitator Superfamily
FY156_25585	COG1473	amidohydrolase
FY156_25590	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FY156_25600	COG0747	negative chemotaxis
FY156_25605	COG0601	transmembrane transport
FY156_25610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_25615	COG0444	Belongs to the ABC transporter superfamily
FY156_25620	COG4608	Belongs to the ABC transporter superfamily
FY156_25630	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
FY156_25640	COG1595	DNA-templated transcription, initiation
FY156_25650	COG0747	negative chemotaxis
FY156_25660	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_25665	COG0154	amidase activity
FY156_25670	COG0693	protein deglycase activity
FY156_25680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_25685	COG0601	transmembrane transport
FY156_25695	COG1473	amidohydrolase
FY156_25700	COG4172	Belongs to the ABC transporter superfamily
FY156_25705	COG2390	Transcriptional regulator
FY156_25715	COG1175	transmembrane transport
FY156_25720	COG0395	ABC-type sugar transport system, permease component
FY156_25745	COG1069	ribulokinase activity
FY156_25770	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY156_25780	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FY156_25785	COG1414	Transcriptional regulator
FY156_25790	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_25800	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY156_25805	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY156_25815	COG0803	Belongs to the bacterial solute-binding protein 9 family
FY156_25825	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FY156_25830	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FY156_25835	COG0471	metal ion transport
FY156_25835	COG3273	potassium ion transport
FY156_25840	COG1253	flavin adenine dinucleotide binding
FY156_25845	COG1309	transcriptional regulator
FY156_25860	COG1609	Transcriptional regulator
FY156_25865	COG1070	Carbohydrate kinase
FY156_25870	COG2115	Belongs to the xylose isomerase family
FY156_25880	COG0778	Nitroreductase
FY156_25885	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FY156_25890	COG2011	ABC-type metal ion transport system permease component
FY156_25900	COG5001	Diguanylate cyclase
FY156_25900	COG3300	MHYT domain
FY156_25905	COG1054	Belongs to the UPF0176 family
FY156_25915	COG2954	triphosphatase activity
FY156_25920	COG0800	Aldolase
FY156_25950	COG0583	DNA-binding transcription factor activity
FY156_25980	COG3047	cAMP biosynthetic process
FY156_26010	COG0523	cobalamin synthesis protein
FY156_26020	COG1846	Transcriptional regulator
FY156_26025	COG1609	Transcriptional regulator
FY156_26030	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY156_26035	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FY156_26040	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FY156_26070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_26085	COG0786	glutamate:sodium symporter activity
FY156_26090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_26095	COG2079	MmgE PrpD family protein
FY156_26100	COG1126	abc transporter atp-binding protein
FY156_26105	COG0765	amino acid transport
FY156_26120	COG0280	phosphate acetyltransferase
FY156_26120	COG0281	malic enzyme
FY156_26130	COG4993	Dehydrogenase
FY156_26145	COG1175	transmembrane transport
FY156_26150	COG0395	ABC-type sugar transport system, permease component
FY156_26155	COG3842	ATPase activity
FY156_26165	COG0673	inositol 2-dehydrogenase activity
FY156_26170	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FY156_26175	COG0720	synthase
FY156_26180	COG0602	queuosine metabolic process
FY156_26185	COG0673	inositol 2-dehydrogenase activity
FY156_26210	COG1653	transport
FY156_26215	COG1609	Transcriptional regulator
FY156_26225	COG2094	Belongs to the DNA glycosylase MPG family
FY156_26235	COG1376	ErfK ybiS ycfS ynhG family protein
FY156_26240	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY156_26250	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FY156_26255	COG1596	polysaccharide export
FY156_26260	COG3307	-O-antigen
FY156_26290	COG2197	response regulator
FY156_26325	COG2942	2-epimerase
FY156_26335	COG1215	transferase activity, transferring glycosyl groups
FY156_26355	COG1473	amidohydrolase
FY156_26365	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_26370	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY156_26390	COG0601	transmembrane transport
FY156_26395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_26400	COG0405	Gamma-glutamyltransferase
FY156_26405	COG4172	Belongs to the ABC transporter superfamily
FY156_26410	COG1301	dicarboxylic acid transport
FY156_26415	COG4191	Histidine kinase
FY156_26420	COG2204	response regulator
FY156_26440	COG0395	ABC-type sugar transport system, permease component
FY156_26445	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY156_26455	COG3842	ATPase activity
FY156_26465	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_26470	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FY156_26475	COG1522	sequence-specific DNA binding
FY156_26480	COG0351	phosphomethylpyrimidine kinase
FY156_26485	COG0352	thiamine-phosphate diphosphorylase activity
FY156_26490	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FY156_26495	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY156_26500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY156_26505	COG1501	Belongs to the glycosyl hydrolase 31 family
FY156_26510	COG0395	ABC-type sugar transport system, permease component
FY156_26515	COG1175	transmembrane transport
FY156_26520	COG1653	transport
FY156_26525	COG3842	ATPase activity
FY156_26540	COG4989	oxidoreductase activity
FY156_26555	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_26560	COG0625	glutathione transferase activity
FY156_26580	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY156_26580	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY156_26585	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY156_26605	COG0765	amino acid transport
FY156_26610	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_26620	COG1126	abc transporter atp-binding protein
FY156_26645	COG1312	Catalyzes the dehydration of D-mannonate
FY156_26650	COG1063	alcohol dehydrogenase
FY156_26655	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY156_26665	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY156_26670	COG2186	Transcriptional regulator
FY156_26675	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY156_26680	COG0850	regulation of cytokinetic process
FY156_26685	COG2894	cell division
FY156_26690	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FY156_26695	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_26705	COG5001	Diguanylate cyclase
FY156_26730	COG1653	transport
FY156_26735	COG1175	transmembrane transport
FY156_26740	COG0395	ABC-type sugar transport system, permease component
FY156_26745	COG3842	ATPase activity
FY156_26755	COG0673	inositol 2-dehydrogenase activity
FY156_26770	COG2207	Transcriptional regulator
FY156_26780	COG2186	Transcriptional regulator
FY156_26785	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_26790	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_26795	COG1129	ABC transporter
FY156_26800	COG1879	ABC-type sugar transport system periplasmic component
FY156_26805	COG0129	dihydroxy-acid dehydratase activity
FY156_26815	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FY156_26820	COG4608	Belongs to the ABC transporter superfamily
FY156_26825	COG0444	Belongs to the ABC transporter superfamily
FY156_26830	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_26835	COG0601	transmembrane transport
FY156_26840	COG0747	negative chemotaxis
FY156_26845	COG0436	Aminotransferase
FY156_26870	COG5001	Diguanylate cyclase
FY156_26880	COG3257	ureidoglycine aminohydrolase activity
FY156_26885	COG5001	Diguanylate cyclase
FY156_26885	COG3447	MASE1 domain protein
FY156_26885	COG5002	protein histidine kinase activity
FY156_26895	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY156_26905	COG1129	ABC transporter
FY156_26910	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY156_26915	COG1879	ABC-type sugar transport system periplasmic component
FY156_26920	COG3842	ATPase activity
FY156_26925	COG0395	ABC-type sugar transport system, permease component
FY156_26930	COG1175	transmembrane transport
FY156_26935	COG1653	transport
FY156_26945	COG3842	ATPase activity
FY156_26955	COG1840	ABC-type Fe3 transport system, periplasmic component
FY156_26960	COG1609	Transcriptional regulator
FY156_26980	COG0523	cobalamin synthesis protein
FY156_26985	COG1121	(ABC) transporter
FY156_26995	COG0803	Belongs to the bacterial solute-binding protein 9 family
FY156_27005	COG0784	Response regulator, receiver
FY156_27010	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY156_27020	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY156_27025	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY156_27040	COG0765	amino acid transport
FY156_27050	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY156_27060	COG3938	Belongs to the proline racemase family
FY156_27075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY156_27080	COG0765	amino acid transport
FY156_27085	COG0765	amino acid transport
FY156_27095	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY156_27120	COG3206	protein involved in exopolysaccharide biosynthesis
FY156_27120	COG0489	protein tyrosine kinase activity
FY156_27130	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY156_27135	COG0438	transferase activity, transferring glycosyl groups
FY156_27140	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY156_27145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_27225	COG2895	sulfate adenylyltransferase (ATP) activity
FY156_27225	COG0529	Catalyzes the synthesis of activated sulfate
FY156_27235	COG1396	sequence-specific DNA binding
FY156_27270	COG2135	peptidase activity
FY156_27295	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FY156_27300	COG1764	response to oxidative stress
FY156_27330	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FY156_27340	COG0297	glycogen (starch) synthase activity
FY156_27355	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY156_27375	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY156_27385	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY156_27400	COG2197	response regulator
FY156_27420	COG3077	Addiction module antitoxin, RelB DinJ family
FY156_27450	COG3177	Filamentation induced by cAMP protein fic
FY156_27460	COG3609	addiction module antidote protein, CC2985 family
FY156_27465	COG3609	addiction module antidote protein, CC2985 family
FY156_27485	COG0583	DNA-binding transcription factor activity
FY156_27490	COG3181	Tripartite tricarboxylate transporter family receptor
FY156_27515	COG3395	kinase activity
FY156_27520	COG0235	Class ii aldolase
FY156_27525	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY156_27530	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FY156_27570	COG4691	Plasmid stability protein
FY156_27575	COG1487	ribonuclease activity
FY156_27590	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FY156_27595	COG2207	Transcriptional regulator
FY156_27610	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY156_27625	COG1278	Cold shock
FY156_27640	COG0753	catalase activity
FY156_27720	COG4221	oxidoreductase activity
FY156_27740	COG4221	oxidoreductase activity
FY156_27745	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_27755	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_27775	COG3959	Transketolase, thiamine diphosphate binding domain
FY156_27780	COG3958	Transketolase
FY156_27785	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FY156_27800	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY156_27805	COG0395	ABC-type sugar transport system, permease component
FY156_27810	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_27815	COG1802	Transcriptional regulator
FY156_27820	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY156_27830	COG3842	ATPase activity
FY156_27845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_27850	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_27860	COG0583	DNA-binding transcription factor activity
FY156_27875	COG2207	Transcriptional regulator
FY156_27890	COG1741	Belongs to the pirin family
FY156_27895	COG0583	DNA-binding transcription factor activity
FY156_27915	COG1396	sequence-specific DNA binding
FY156_27985	COG4957	zinc ion binding
FY156_27995	COG2200	EAL domain
FY156_28010	COG1376	ErfK ybiS ycfS ynhG family protein
FY156_28015	COG4232	protein-disulfide reductase activity
FY156_28025	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FY156_28040	COG3077	Addiction module antitoxin, RelB DinJ family
FY156_28075	COG0753	catalase activity
FY156_28090	COG1278	Cold shock
FY156_28125	COG3077	Addiction module antitoxin, RelB DinJ family
FY156_28130	COG0326	Molecular chaperone. Has ATPase activity
FY156_28170	COG0405	Gamma-glutamyltransferase
FY156_28180	COG0071	Belongs to the small heat shock protein (HSP20) family
FY156_28195	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FY156_28200	COG0459	protein refolding
FY156_28205	COG4191	Histidine kinase
FY156_28205	COG0784	Response regulator, receiver
FY156_28210	COG0784	Response regulator, receiver
FY156_28215	COG3920	Histidine kinase
FY156_28215	COG2202	Pas domain
FY156_28220	COG4191	Histidine kinase
FY156_28220	COG0784	Response regulator, receiver
FY156_28255	COG1566	PFAM secretion protein HlyD family protein
FY156_28265	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY156_28270	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY156_28280	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FY156_28335	COG1802	Transcriptional regulator
FY156_28370	COG2897	thiosulfate sulfurtransferase activity
FY156_28375	COG0277	FAD linked oxidase domain protein
FY156_28390	COG0601	transmembrane transport
FY156_28395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_28400	COG4172	Belongs to the ABC transporter superfamily
FY156_28410	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_28420	COG0431	NADPH-dependent FMN reductase
FY156_28425	COG0784	Response regulator, receiver
FY156_28425	COG4191	Histidine kinase
FY156_28430	COG0784	Response regulator, receiver
FY156_28430	COG4191	Histidine kinase
FY156_28445	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FY156_28450	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FY156_28470	COG1802	Transcriptional regulator
FY156_28475	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY156_28495	COG0559	Belongs to the binding-protein-dependent transport system permease family
FY156_28515	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FY156_28520	COG1846	Transcriptional regulator
FY156_28525	COG1487	ribonuclease activity
FY156_28530	COG4691	Plasmid stability protein
FY156_28550	COG3177	Filamentation induced by cAMP protein fic
FY156_28570	COG0583	DNA-binding transcription factor activity
FY156_28575	COG1028	Short-chain dehydrogenase reductase Sdr
FY156_28610	COG4644	lycopene metabolic process
FY156_28625	COG2205	protein histidine kinase activity
FY156_28675	COG2514	catechol 2,3-dioxygenase activity
FY156_28680	COG0435	Glutathione S-transferase
FY156_28685	COG0400	carboxylic ester hydrolase activity
FY156_28690	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY156_28710	COG2999	glutathione oxidoreductase activity
FY156_28715	COG1942	4-Oxalocrotonate Tautomerase
FY156_28720	COG2267	carboxylic ester hydrolase activity
FY156_28725	COG0583	DNA-binding transcription factor activity
FY156_28735	COG4993	Dehydrogenase
FY156_28745	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FY156_28750	COG3791	Glutathione-dependent formaldehyde-activating
FY156_28800	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FY156_28855	COG3657	addiction module killer protein
FY156_28870	COG3831	ATPase activity
FY156_28885	COG1192	Involved in chromosome partitioning
FY156_28890	COG1475	DNA binding
FY156_28895	COG0640	Transcriptional regulator
FY156_28900	COG1278	Cold shock
FY156_28915	COG1278	Cold shock
FY156_28925	COG0784	Response regulator, receiver
FY156_28935	COG3920	Histidine kinase
FY156_28940	COG0693	protein deglycase activity
FY156_28945	COG2205	protein histidine kinase activity
FY156_28945	COG0784	Response regulator, receiver
FY156_29000	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
FY156_29005	COG2948	multi-organism process
FY156_29035	COG3451	type IV secretory pathway VirB4
FY156_29095	COG0741	lytic transglycosylase activity
FY156_29175	COG2080	2 iron, 2 sulfur cluster binding
FY156_29180	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FY156_29185	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FY156_29190	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FY156_29195	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FY156_29220	COG3108	Peptidase M15
FY156_29235	COG0708	Exodeoxyribonuclease III
FY156_29240	COG1192	Involved in chromosome partitioning
FY156_29245	COG1475	DNA binding
FY156_29250	COG0640	Transcriptional regulator
FY156_29255	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FY156_29285	COG2211	Major facilitator Superfamily
FY156_29330	COG4974	Belongs to the 'phage' integrase family
FY156_29335	COG1051	belongs to the nudix hydrolase family
FY156_29375	COG1475	DNA binding
FY156_29400	COG2824	Alkylphosphonate utilization operon protein PhnA
FY156_29425	COG1280	lysine exporter protein (LysE YggA)
FY156_29490	COG5489	Protein of unknown function (DUF736)
FY156_29575	COG1283	sodium-dependent phosphate transmembrane transporter activity
FY156_29585	COG0747	negative chemotaxis
FY156_29605	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_29610	COG0584	glycerophosphoryl diester phosphodiesterase
FY156_29615	COG0483	inositol monophosphate 1-phosphatase activity
FY156_29680	COG3161	chorismate lyase activity
FY156_29830	COG3436	PFAM IS66 Orf2 family protein
FY156_29925	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY156_29955	COG0583	DNA-binding transcription factor activity
FY156_29960	COG0747	negative chemotaxis
FY156_29975	COG0252	asparaginase activity
FY156_29980	COG0583	DNA-binding transcription factor activity
FY156_30000	COG3842	ATPase activity
FY156_30025	COG3701	Conjugal transfer protein
FY156_30030	COG3846	protein secretion by the type IV secretion system
FY156_30040	COG5314	conjugation
FY156_30045	COG3451	type IV secretory pathway VirB4
FY156_30060	COG4962	Type ii secretion system protein e