locus-tag class description FY131_00005 PF00308 Bacterial dnaA protein FY131_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY131_00005 PF11638 DnaA N-terminal domain FY131_00010 PF06969 HemN C-terminal domain FY131_00010 PF04055 Radical SAM superfamily FY131_00015 PF01725 Ham1 family FY131_00020 PF01138 3' exoribonuclease family, domain 1 FY131_00020 PF03725 3' exoribonuclease family, domain 2 FY131_00025 PF01628 HrcA protein C terminal domain FY131_00030 PF01025 GrpE FY131_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY131_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY131_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY131_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY131_00045 PF04963 Sigma-54 factor, core binding domain FY131_00045 PF04552 Sigma-54, DNA binding domain FY131_00050 PF00005 ABC transporter FY131_00055 PF03968 OstA-like protein FY131_00065 PF01343 Peptidase family S49 FY131_00070 PF00216 Bacterial DNA-binding protein FY131_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY131_00080 PF02926 THUMP domain FY131_00080 PF01170 Putative RNA methylase family UPF0020 FY131_00085 PF00588 SpoU rRNA Methylase family FY131_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY131_00090 PF01252 Signal peptidase (SPase) II FY131_00095 PF00672 HAMP domain FY131_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_00095 PF00512 His Kinase A (phospho-acceptor) domain FY131_00095 PF01627 Hpt domain FY131_00095 PF00072 Response regulator receiver domain FY131_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY131_00105 PF00488 MutS domain V FY131_00105 PF05190 MutS family domain IV FY131_00105 PF05192 MutS domain III FY131_00105 PF05188 MutS domain II FY131_00105 PF01624 MutS domain I FY131_00110 PF01842 ACT domain FY131_00110 PF08335 GlnD PII-uridylyltransferase FY131_00110 PF01966 HD domain FY131_00110 PF01909 Nucleotidyltransferase domain FY131_00115 PF03023 Lipid II flippase MurJ FY131_00125 PF00579 tRNA synthetases class I (W and Y) FY131_00135 PF01106 NifU-like domain FY131_00140 PF00814 Glycoprotease family FY131_00145 PF00814 Glycoprotease family FY131_00145 PF00583 Acetyltransferase (GNAT) family FY131_00150 PF01475 Ferric uptake regulator family FY131_00155 PF01553 Acyltransferase FY131_00160 PF04055 Radical SAM superfamily FY131_00160 PF01938 TRAM domain FY131_00160 PF00919 Uncharacterized protein family UPF0004 FY131_00165 PF02562 PhoH-like protein FY131_00170 PF02130 Uncharacterized protein family UPF0054 FY131_00175 PF00571 CBS domain FY131_00175 PF03471 Transporter associated domain FY131_00180 PF00795 Carbon-nitrogen hydrolase FY131_00185 PF01381 Helix-turn-helix FY131_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY131_00190 PF02772 S-adenosylmethionine synthetase, central domain FY131_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY131_00195 PF02390 Putative methyltransferase FY131_00200 PF00294 pfkB family carbohydrate kinase FY131_00205 PF02646 RmuC family FY131_00210 PF01327 Polypeptide deformylase FY131_00215 PF02911 Formyl transferase, C-terminal domain FY131_00215 PF00551 Formyl transferase FY131_00220 PF01416 tRNA pseudouridine synthase FY131_00230 PF01546 Peptidase family M20/M25/M40 FY131_00230 PF07687 Peptidase dimerisation domain FY131_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY131_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY131_00245 PF00672 HAMP domain FY131_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY131_00255 PF00011 Hsp20/alpha crystallin family FY131_00280 PF00696 Amino acid kinase family FY131_00290 PF01926 50S ribosome-binding GTPase FY131_00295 PF14849 YidC periplasmic domain FY131_00295 PF02096 60Kd inner membrane protein FY131_00300 PF00825 Ribonuclease P FY131_00305 PF00468 Ribosomal protein L34 FY131_00310 PF00672 HAMP domain FY131_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_00315 PF00512 His Kinase A (phospho-acceptor) domain FY131_00325 PF01209 ubiE/COQ5 methyltransferase family FY131_00330 PF00005 ABC transporter FY131_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY131_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY131_00350 PF00149 Calcineurin-like phosphoesterase FY131_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY131_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY131_00365 PF05544 Proline racemase FY131_00370 PF01979 Amidohydrolase family FY131_00375 PF00156 Phosphoribosyl transferase domain FY131_00380 PF00294 pfkB family carbohydrate kinase FY131_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY131_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY131_00400 PF00342 Phosphoglucose isomerase FY131_00405 PF13193 AMP-binding enzyme C-terminal domain FY131_00405 PF00501 AMP-binding enzyme FY131_00410 PF08402 TOBE domain FY131_00410 PF00005 ABC transporter FY131_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY131_00425 PF07715 TonB-dependent Receptor Plug Domain FY131_00425 PF00593 TonB dependent receptor FY131_00445 PF01679 Proteolipid membrane potential modulator FY131_00465 PF03976 Polyphosphate kinase 2 (PPK2) FY131_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_00470 PF16736 Single Cache-like FY131_00470 PF00512 His Kinase A (phospho-acceptor) domain FY131_00470 PF00989 PAS fold FY131_00475 PF12849 PBP superfamily domain FY131_00480 PF00528 Binding-protein-dependent transport system inner membrane component FY131_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY131_00490 PF00005 ABC transporter FY131_00495 PF01895 PhoU domain FY131_00500 PF00486 Transcriptional regulatory protein, C terminal FY131_00500 PF00072 Response regulator receiver domain FY131_00510 PF00202 Aminotransferase class-III FY131_00515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY131_00515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY131_00520 PF01430 Hsp33 protein FY131_00525 PF04379 ApaG domain FY131_00530 PF01053 Cys/Met metabolism PLP-dependent enzyme FY131_00540 PF00692 dUTPase FY131_00550 PF00230 Major intrinsic protein FY131_00590 PF00072 Response regulator receiver domain FY131_00590 PF00196 Bacterial regulatory proteins, luxR family FY131_00600 PF01180 Dihydroorotate dehydrogenase FY131_00615 PF08241 Methyltransferase domain FY131_00635 PF02082 Transcriptional regulator FY131_00640 PF00270 DEAD/DEAH box helicase FY131_00640 PF08494 DEAD/H associated FY131_00640 PF00271 Helicase conserved C-terminal domain FY131_00660 PF01925 Sulfite exporter TauE/SafE FY131_00670 PF02770 Acyl-CoA dehydrogenase, middle domain FY131_00670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY131_00670 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY131_00670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_00675 PF02803 Thiolase, C-terminal domain FY131_00675 PF00108 Thiolase, N-terminal domain FY131_00680 PF00378 Enoyl-CoA hydratase/isomerase FY131_00680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY131_00680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY131_00720 PF03334 Na+/H+ antiporter subunit FY131_00725 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY131_00730 PF01899 Na+/H+ ion antiporter subunit FY131_00735 PF00361 Proton-conducting membrane transporter FY131_00740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY131_00745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY131_00745 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY131_00745 PF13244 Domain of unknown function (DUF4040) FY131_00745 PF00361 Proton-conducting membrane transporter FY131_00755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_00765 PF00072 Response regulator receiver domain FY131_00770 PF01584 CheW-like domain FY131_00770 PF02895 Signal transducing histidine kinase, homodimeric domain FY131_00770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_00770 PF01627 Hpt domain FY131_00775 PF01739 CheR methyltransferase, SAM binding domain FY131_00775 PF03705 CheR methyltransferase, all-alpha domain FY131_00780 PF01339 CheB methylesterase FY131_00780 PF00072 Response regulator receiver domain FY131_00785 PF00072 Response regulator receiver domain FY131_00790 PF03975 CheD chemotactic sensory transduction FY131_00800 PF08345 Flagellar M-ring protein C-terminal FY131_00800 PF01514 Secretory protein of YscJ/FliF family FY131_00805 PF00196 Bacterial regulatory proteins, luxR family FY131_00805 PF03472 Autoinducer binding domain FY131_00815 PF00672 HAMP domain FY131_00815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_00820 PF00512 His Kinase A (phospho-acceptor) domain FY131_00820 PF00672 HAMP domain FY131_00820 PF01627 Hpt domain FY131_00820 PF00072 Response regulator receiver domain FY131_00825 PF01741 Large-conductance mechanosensitive channel, MscL FY131_00830 PF00155 Aminotransferase class I and II FY131_00835 PF01370 NAD dependent epimerase/dehydratase family FY131_00845 PF03884 DNA gyrase inhibitor YacG FY131_00850 PF02545 Maf-like protein FY131_00855 PF01176 Translation initiation factor 1A / IF-1 FY131_00865 PF06793 Uncharacterised protein family (UPF0262) FY131_00870 PF00815 Histidinol dehydrogenase FY131_00880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY131_00895 PF00669 Bacterial flagellin N-terminal helical region FY131_00895 PF00700 Bacterial flagellin C-terminal helical region FY131_00900 PF00700 Bacterial flagellin C-terminal helical region FY131_00900 PF00669 Bacterial flagellin N-terminal helical region FY131_00905 PF00669 Bacterial flagellin N-terminal helical region FY131_00905 PF00700 Bacterial flagellin C-terminal helical region FY131_00910 PF00813 FliP family FY131_00920 PF02107 Flagellar L-ring protein FY131_00930 PF02119 Flagellar P-ring protein FY131_00935 PF13144 Chaperone for flagella basal body P-ring formation FY131_00940 PF00460 Flagella basal body rod protein FY131_00940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY131_00945 PF02049 Flagellar hook-basal body complex protein FliE FY131_00950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY131_00955 PF00460 Flagella basal body rod protein FY131_00965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY131_00965 PF18269 T3SS EscN ATPase C-terminal domain FY131_00970 PF00460 Flagella basal body rod protein FY131_00970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY131_00980 PF01618 MotA/TolQ/ExbB proton channel family FY131_00985 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY131_00990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY131_00995 PF14842 FliG N-terminal domain FY131_00995 PF01706 FliG C-terminal domain FY131_00995 PF14841 FliG middle domain FY131_01000 PF01312 FlhB HrpN YscU SpaS Family FY131_01010 PF00700 Bacterial flagellin C-terminal helical region FY131_01010 PF00669 Bacterial flagellin N-terminal helical region FY131_01020 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY131_01020 PF00691 OmpA family FY131_01030 PF02120 Flagellar hook-length control protein FliK FY131_01040 PF00486 Transcriptional regulatory protein, C terminal FY131_01045 PF07559 Flagellar basal body protein FlaE FY131_01045 PF00460 Flagella basal body rod protein FY131_01045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY131_01065 PF07378 Flagellar protein FlbT FY131_01070 PF03963 Flagellar hook capping protein - N-terminal region FY131_01075 PF01313 Bacterial export proteins, family 3 FY131_01080 PF00771 FHIPEP family FY131_01085 PF01311 Bacterial export proteins, family 1 FY131_01120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY131_01120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY131_01125 PF00356 Bacterial regulatory proteins, lacI family FY131_01130 PF01547 Bacterial extracellular solute-binding protein FY131_01135 PF00528 Binding-protein-dependent transport system inner membrane component FY131_01140 PF00528 Binding-protein-dependent transport system inner membrane component FY131_01145 PF00128 Alpha amylase, catalytic domain FY131_01150 PF17912 MalK OB fold domain FY131_01150 PF00005 ABC transporter FY131_01150 PF03459 TOBE domain FY131_01165 PF00920 Dehydratase family FY131_01170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY131_01175 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY131_01175 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY131_01185 PF01266 FAD dependent oxidoreductase FY131_01190 PF00120 Glutamine synthetase, catalytic domain FY131_01215 PF00463 Isocitrate lyase family FY131_01220 PF09856 Predicted transcriptional regulator (DUF2083) FY131_01220 PF06114 IrrE N-terminal-like domain FY131_01220 PF01381 Helix-turn-helix FY131_01225 PF13416 Bacterial extracellular solute-binding protein FY131_01230 PF08402 TOBE domain FY131_01230 PF00005 ABC transporter FY131_01235 PF00528 Binding-protein-dependent transport system inner membrane component FY131_01240 PF00528 Binding-protein-dependent transport system inner membrane component FY131_01250 PF00989 PAS fold FY131_01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_01250 PF00512 His Kinase A (phospho-acceptor) domain FY131_01250 PF13426 PAS domain FY131_01250 PF13188 PAS domain FY131_01260 PF02541 Ppx/GppA phosphatase family FY131_01265 PF01728 FtsJ-like methyltransferase FY131_01270 PF07690 Major Facilitator Superfamily FY131_01275 PF00753 Metallo-beta-lactamase superfamily FY131_01280 PF00478 IMP dehydrogenase / GMP reductase domain FY131_01280 PF00571 CBS domain FY131_01290 PF08240 Alcohol dehydrogenase GroES-like domain FY131_01290 PF00107 Zinc-binding dehydrogenase FY131_01295 PF01738 Dienelactone hydrolase family FY131_01300 PF00994 Probable molybdopterin binding domain FY131_01305 PF08544 GHMP kinases C terminal FY131_01305 PF00288 GHMP kinases N terminal domain FY131_01315 PF00348 Polyprenyl synthetase FY131_01330 PF06965 Na+/H+ antiporter 1 FY131_01330 PF01343 Peptidase family S49 FY131_01340 PF02091 Glycyl-tRNA synthetase alpha subunit FY131_01350 PF04011 LemA family FY131_01355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY131_01365 PF02092 Glycyl-tRNA synthetase beta subunit FY131_01365 PF05746 DALR anticodon binding domain FY131_01385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_01385 PF00672 HAMP domain FY131_01395 PF02844 Phosphoribosylglycinamide synthetase, N domain FY131_01395 PF02843 Phosphoribosylglycinamide synthetase, C domain FY131_01395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY131_01400 PF16921 Tex protein YqgF-like domain FY131_01400 PF09371 Tex-like protein N-terminal domain FY131_01400 PF00575 S1 RNA binding domain FY131_01400 PF17674 HHH domain FY131_01415 PF01040 UbiA prenyltransferase family FY131_01430 PF03466 LysR substrate binding domain FY131_01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_01440 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY131_01445 PF04452 RNA methyltransferase FY131_01450 PF01384 Phosphate transporter family FY131_01460 PF05116 Sucrose-6F-phosphate phosphohydrolase FY131_01465 PF13439 Glycosyltransferase Family 4 FY131_01465 PF00534 Glycosyl transferases group 1 FY131_01470 PF07729 FCD domain FY131_01470 PF00392 Bacterial regulatory proteins, gntR family FY131_01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_01480 PF03466 LysR substrate binding domain FY131_01485 PF01565 FAD binding domain FY131_01485 PF02913 FAD linked oxidases, C-terminal domain FY131_01490 PF01565 FAD binding domain FY131_01495 PF13183 4Fe-4S dicluster domain FY131_01495 PF02754 Cysteine-rich domain FY131_01505 PF17969 L,D-transpeptidase C-terminal domain FY131_01505 PF03734 L,D-transpeptidase catalytic domain FY131_01510 PF03352 Methyladenine glycosylase FY131_01520 PF03601 Conserved hypothetical protein 698 FY131_01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_01525 PF03466 LysR substrate binding domain FY131_01545 PF13393 Histidyl-tRNA synthetase FY131_01545 PF03129 Anticodon binding domain FY131_01555 PF13393 Histidyl-tRNA synthetase FY131_01560 PF01634 ATP phosphoribosyltransferase FY131_01565 PF07681 DoxX FY131_01575 PF00118 TCP-1/cpn60 chaperonin family FY131_01580 PF00166 Chaperonin 10 Kd subunit FY131_01590 PF01687 Riboflavin kinase FY131_01590 PF06574 FAD synthetase FY131_01595 PF00133 tRNA synthetases class I (I, L, M and V) FY131_01595 PF08264 Anticodon-binding domain of tRNA FY131_01605 PF14437 MafB19-like deaminase FY131_01610 PF00849 RNA pseudouridylate synthase FY131_01610 PF01479 S4 domain FY131_01620 PF01734 Patatin-like phospholipase FY131_01625 PF02254 TrkA-N domain FY131_01625 PF00999 Sodium/hydrogen exchanger family FY131_01630 PF01523 Putative modulator of DNA gyrase FY131_01645 PF00534 Glycosyl transferases group 1 FY131_01645 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY131_01655 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY131_01665 PF01119 DNA mismatch repair protein, C-terminal domain FY131_01665 PF08676 MutL C terminal dimerisation domain FY131_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_01670 PF00512 His Kinase A (phospho-acceptor) domain FY131_01670 PF01627 Hpt domain FY131_01670 PF00989 PAS fold FY131_01670 PF00072 Response regulator receiver domain FY131_01670 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_01675 PF00990 Diguanylate cyclase, GGDEF domain FY131_01675 PF03707 Bacterial signalling protein N terminal repeat FY131_01675 PF00563 EAL domain FY131_01675 PF13188 PAS domain FY131_01680 PF08450 SMP-30/Gluconolactonase/LRE-like region FY131_01685 PF01081 KDPG and KHG aldolase FY131_01690 PF05035 2-keto-3-deoxy-galactonokinase FY131_01705 PF03472 Autoinducer binding domain FY131_01705 PF00196 Bacterial regulatory proteins, luxR family FY131_01715 PF10609 NUBPL iron-transfer P-loop NTPase FY131_01720 PF01544 CorA-like Mg2+ transporter protein FY131_01725 PF02705 K+ potassium transporter FY131_01735 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FY131_01740 PF00119 ATP synthase A chain FY131_01745 PF00137 ATP synthase subunit C FY131_01750 PF00430 ATP synthase B/B' CF(0) FY131_01755 PF00430 ATP synthase B/B' CF(0) FY131_01765 PF01351 Ribonuclease HII FY131_01780 PF02913 FAD linked oxidases, C-terminal domain FY131_01780 PF01565 FAD binding domain FY131_01785 PF01300 Telomere recombination FY131_01785 PF03481 Putative GTP-binding controlling metal-binding FY131_01795 PF00355 Rieske [2Fe-2S] domain FY131_01795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY131_01800 PF00970 Oxidoreductase FAD-binding domain FY131_01800 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_01800 PF00175 Oxidoreductase NAD-binding domain FY131_01805 PF07886 BA14K-like protein FY131_01810 PF07886 BA14K-like protein FY131_01820 PF02770 Acyl-CoA dehydrogenase, middle domain FY131_01820 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY131_01820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY131_01820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_01835 PF05958 tRNA (Uracil-5-)-methyltransferase FY131_01840 PF01728 FtsJ-like methyltransferase FY131_01840 PF01479 S4 domain FY131_01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_01845 PF00672 HAMP domain FY131_01870 PF02780 Transketolase, C-terminal domain FY131_01870 PF02779 Transketolase, pyrimidine binding domain FY131_01870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY131_01875 PF02678 Pirin FY131_01875 PF05726 Pirin C-terminal cupin domain FY131_01880 PF02609 Exonuclease VII small subunit FY131_01885 PF00850 Histone deacetylase domain FY131_01890 PF02632 BioY family FY131_01895 PF02361 Cobalt transport protein FY131_01900 PF00005 ABC transporter FY131_01905 PF06224 Winged helix DNA-binding domain FY131_01910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY131_01910 PF00925 GTP cyclohydrolase II FY131_01915 PF01264 Chorismate synthase FY131_01930 PF00300 Histidine phosphatase superfamily (branch 1) FY131_01940 PF00226 DnaJ domain FY131_01940 PF01556 DnaJ C terminal domain FY131_01940 PF00684 DnaJ central domain FY131_01950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY131_01950 PF01243 Pyridoxamine 5'-phosphate oxidase FY131_01965 PF13419 Haloacid dehalogenase-like hydrolase FY131_01975 PF01523 Putative modulator of DNA gyrase FY131_01985 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY131_01985 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY131_01990 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY131_01995 PF01040 UbiA prenyltransferase family FY131_02000 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY131_02005 PF00510 Cytochrome c oxidase subunit III FY131_02015 PF02104 SURF1 family FY131_02020 PF02401 LytB protein FY131_02025 PF01636 Phosphotransferase enzyme family FY131_02030 PF00075 RNase H FY131_02040 PF00462 Glutaredoxin FY131_02040 PF08534 Redoxin FY131_02050 PF02622 Uncharacterized ACR, COG1678 FY131_02060 PF10005 zinc-ribbon domain FY131_02060 PF15887 Putative zinc-binding metallo-peptidase FY131_02065 PF00563 EAL domain FY131_02065 PF13185 GAF domain FY131_02065 PF00990 Diguanylate cyclase, GGDEF domain FY131_02070 PF13302 Acetyltransferase (GNAT) domain FY131_02075 PF00675 Insulinase (Peptidase family M16) FY131_02075 PF05193 Peptidase M16 inactive domain FY131_02080 PF14821 Threonine synthase N terminus FY131_02080 PF00291 Pyridoxal-phosphate dependent enzyme FY131_02090 PF13419 Haloacid dehalogenase-like hydrolase FY131_02110 PF18755 Restriction Enzyme Adenine Methylase Associated FY131_02110 PF01555 DNA methylase FY131_02120 PF14815 NUDIX domain FY131_02120 PF00730 HhH-GPD superfamily base excision DNA repair protein FY131_02130 PF13462 Thioredoxin FY131_02135 PF02463 RecF/RecN/SMC N terminal domain FY131_02140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_02145 PF00391 PEP-utilising enzyme, mobile domain FY131_02145 PF02896 PEP-utilising enzyme, TIM barrel domain FY131_02145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY131_02160 PF00375 Sodium:dicarboxylate symporter family FY131_02180 PF06039 Malate:quinone oxidoreductase (Mqo) FY131_02205 PF00009 Elongation factor Tu GTP binding domain FY131_02210 PF01507 Phosphoadenosine phosphosulfate reductase family FY131_02215 PF01507 Phosphoadenosine phosphosulfate reductase family FY131_02220 PF02082 Transcriptional regulator FY131_02230 PF00528 Binding-protein-dependent transport system inner membrane component FY131_02235 PF00528 Binding-protein-dependent transport system inner membrane component FY131_02240 PF00005 ABC transporter FY131_02240 PF12857 TOBE-like domain FY131_02245 PF14765 Polyketide synthase dehydratase FY131_02245 PF00550 Phosphopantetheine attachment site FY131_02245 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_02245 PF08659 KR domain FY131_02245 PF00107 Zinc-binding dehydrogenase FY131_02245 PF08240 Alcohol dehydrogenase GroES-like domain FY131_02245 PF00698 Acyl transferase domain FY131_02245 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_02245 PF16197 Ketoacyl-synthetase C-terminal extension FY131_02250 PF00563 EAL domain FY131_02250 PF01590 GAF domain FY131_02250 PF00990 Diguanylate cyclase, GGDEF domain FY131_02250 PF00989 PAS fold FY131_02260 PF00440 Bacterial regulatory proteins, tetR family FY131_02260 PF13977 BetI-type transcriptional repressor, C-terminal FY131_02265 PF00171 Aldehyde dehydrogenase family FY131_02270 PF00732 GMC oxidoreductase FY131_02270 PF05199 GMC oxidoreductase FY131_02285 PF00654 Voltage gated chloride channel FY131_02315 PF07690 Major Facilitator Superfamily FY131_02325 PF04679 ATP dependent DNA ligase C terminal region FY131_02325 PF01068 ATP dependent DNA ligase domain FY131_02325 PF04675 DNA ligase N terminus FY131_02335 PF00403 Heavy-metal-associated domain FY131_02340 PF03734 L,D-transpeptidase catalytic domain FY131_02340 PF17969 L,D-transpeptidase C-terminal domain FY131_02345 PF03734 L,D-transpeptidase catalytic domain FY131_02345 PF17969 L,D-transpeptidase C-terminal domain FY131_02360 PF01047 MarR family FY131_02365 PF02566 OsmC-like protein FY131_02380 PF00005 ABC transporter FY131_02380 PF12848 ABC transporter FY131_02380 PF16326 ABC transporter C-terminal domain FY131_02415 PF03466 LysR substrate binding domain FY131_02415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_02420 PF00106 short chain dehydrogenase FY131_02430 PF05872 Bacterial protein of unknown function (DUF853) FY131_02440 PF01638 HxlR-like helix-turn-helix FY131_02445 PF00106 short chain dehydrogenase FY131_02450 PF12833 Helix-turn-helix domain FY131_02455 PF01810 LysE type translocator FY131_02460 PF00248 Aldo/keto reductase family FY131_02465 PF08279 HTH domain FY131_02465 PF13280 WYL domain FY131_02480 PF01063 Amino-transferase class IV FY131_02485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_02485 PF00672 HAMP domain FY131_02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_02490 PF03466 LysR substrate binding domain FY131_02505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY131_02505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY131_02520 PF01810 LysE type translocator FY131_02525 PF01322 Cytochrome C' FY131_02530 PF00034 Cytochrome c FY131_02560 PF00376 MerR family regulatory protein FY131_02560 PF09278 MerR, DNA binding FY131_02570 PF02583 Metal-sensitive transcriptional repressor FY131_02585 PF00571 CBS domain FY131_02585 PF00005 ABC transporter FY131_02590 PF00528 Binding-protein-dependent transport system inner membrane component FY131_02600 PF00326 Prolyl oligopeptidase family FY131_02600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY131_02615 PF00701 Dihydrodipicolinate synthetase family FY131_02625 PF12833 Helix-turn-helix domain FY131_02625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY131_02625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY131_02625 PF02805 Metal binding domain of Ada FY131_02630 PF01594 AI-2E family transporter FY131_02635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_02655 PF03006 Haemolysin-III related FY131_02665 PF01810 LysE type translocator FY131_02670 PF01641 SelR domain FY131_02675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY131_02675 PF00361 Proton-conducting membrane transporter FY131_02675 PF13244 Domain of unknown function (DUF4040) FY131_02680 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY131_02685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY131_02690 PF00361 Proton-conducting membrane transporter FY131_02695 PF01899 Na+/H+ ion antiporter subunit FY131_02700 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY131_02705 PF03334 Na+/H+ antiporter subunit FY131_02710 PF05443 ROS/MUCR transcriptional regulator protein FY131_02725 PF02657 Fe-S metabolism associated domain FY131_02730 PF17264 Family of unknown function (DUF5330) FY131_02735 PF00512 His Kinase A (phospho-acceptor) domain FY131_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_02770 PF07687 Peptidase dimerisation domain FY131_02770 PF01546 Peptidase family M20/M25/M40 FY131_02775 PF01810 LysE type translocator FY131_02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_02780 PF03466 LysR substrate binding domain FY131_02785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_02790 PF00905 Penicillin binding protein transpeptidase domain FY131_02790 PF00912 Transglycosylase FY131_02795 PF03692 Putative zinc- or iron-chelating domain FY131_02800 PF00905 Penicillin binding protein transpeptidase domain FY131_02810 PF00376 MerR family regulatory protein FY131_02810 PF09278 MerR, DNA binding FY131_02825 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY131_02825 PF08244 Glycosyl hydrolases family 32 C terminal FY131_02830 PF13426 PAS domain FY131_02830 PF08447 PAS fold FY131_02830 PF07536 HWE histidine kinase FY131_02835 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY131_02845 PF01037 Lrp/AsnC ligand binding domain FY131_02845 PF13404 AsnC-type helix-turn-helix domain FY131_02885 PF04860 Phage portal protein FY131_02975 PF00486 Transcriptional regulatory protein, C terminal FY131_02975 PF00072 Response regulator receiver domain FY131_02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_02995 PF03100 CcmE FY131_03000 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY131_03000 PF01578 Cytochrome C assembly protein FY131_03005 PF03918 Cytochrome C biogenesis protein FY131_03010 PF13180 PDZ domain FY131_03015 PF00072 Response regulator receiver domain FY131_03015 PF00486 Transcriptional regulatory protein, C terminal FY131_03020 PF00072 Response regulator receiver domain FY131_03020 PF13426 PAS domain FY131_03020 PF00512 His Kinase A (phospho-acceptor) domain FY131_03020 PF08448 PAS fold FY131_03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_03025 PF04134 Protein of unknown function, DUF393 FY131_03035 PF08335 GlnD PII-uridylyltransferase FY131_03035 PF03710 Glutamate-ammonia ligase adenylyltransferase FY131_03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_03040 PF00512 His Kinase A (phospho-acceptor) domain FY131_03040 PF00989 PAS fold FY131_03050 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY131_03050 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY131_03050 PF01433 Peptidase family M1 domain FY131_03070 PF00012 Hsp70 protein FY131_03075 PF00990 Diguanylate cyclase, GGDEF domain FY131_03105 PF08240 Alcohol dehydrogenase GroES-like domain FY131_03105 PF00107 Zinc-binding dehydrogenase FY131_03110 PF01638 HxlR-like helix-turn-helix FY131_03115 PF02673 Bacitracin resistance protein BacA FY131_03120 PF00571 CBS domain FY131_03120 PF01769 Divalent cation transporter FY131_03120 PF03448 MgtE intracellular N domain FY131_03125 PF07690 Major Facilitator Superfamily FY131_03130 PF00781 Diacylglycerol kinase catalytic domain FY131_03135 PF00202 Aminotransferase class-III FY131_03145 PF01048 Phosphorylase superfamily FY131_03145 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY131_03170 PF00155 Aminotransferase class I and II FY131_03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_03180 PF14759 Reductase C-terminal FY131_03185 PF03328 HpcH/HpaI aldolase/citrate lyase family FY131_03200 PF02530 Porin subfamily FY131_03205 PF02530 Porin subfamily FY131_03210 PF01464 Transglycosylase SLT domain FY131_03210 PF14718 Soluble lytic murein transglycosylase L domain FY131_03215 PF00701 Dihydrodipicolinate synthetase family FY131_03220 PF01668 SmpB protein FY131_03225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_03225 PF00672 HAMP domain FY131_03235 PF01192 RNA polymerase Rpb6 FY131_03240 PF13291 ACT domain FY131_03240 PF04607 Region found in RelA / SpoT proteins FY131_03240 PF02824 TGS domain FY131_03255 PF01648 4'-phosphopantetheinyl transferase superfamily FY131_03260 PF10502 Signal peptidase, peptidase S26 FY131_03265 PF00035 Double-stranded RNA binding motif FY131_03265 PF14622 Ribonuclease-III-like FY131_03270 PF07650 KH domain FY131_03270 PF01926 50S ribosome-binding GTPase FY131_03275 PF00027 Cyclic nucleotide-binding domain FY131_03275 PF13545 Crp-like helix-turn-helix domain FY131_03280 PF00072 Response regulator receiver domain FY131_03285 PF02565 Recombination protein O C terminal FY131_03285 PF11967 Recombination protein O N terminal FY131_03290 PF07690 Major Facilitator Superfamily FY131_03295 PF08241 Methyltransferase domain FY131_03305 PF01966 HD domain FY131_03315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_03325 PF00005 ABC transporter FY131_03330 PF00528 Binding-protein-dependent transport system inner membrane component FY131_03335 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY131_03340 PF00924 Mechanosensitive ion channel FY131_03340 PF05552 Conserved TM helix FY131_03350 PF01966 HD domain FY131_03375 PF03099 Biotin/lipoate A/B protein ligase family FY131_03375 PF00293 NUDIX domain FY131_03380 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY131_03390 PF00072 Response regulator receiver domain FY131_03390 PF00990 Diguanylate cyclase, GGDEF domain FY131_03395 PF01066 CDP-alcohol phosphatidyltransferase FY131_03400 PF02666 Phosphatidylserine decarboxylase FY131_03405 PF00005 ABC transporter FY131_03405 PF00664 ABC transporter transmembrane region FY131_03415 PF03641 Possible lysine decarboxylase FY131_03420 PF00905 Penicillin binding protein transpeptidase domain FY131_03420 PF03717 Penicillin-binding Protein dimerisation domain FY131_03425 PF00892 EamA-like transporter family FY131_03430 PF00561 alpha/beta hydrolase fold FY131_03450 PF04480 Protein of unknown function (DUF559) FY131_03455 PF09190 DALR domain FY131_03455 PF01406 tRNA synthetases class I (C) catalytic domain FY131_03460 PF00106 short chain dehydrogenase FY131_03465 PF13537 Glutamine amidotransferase domain FY131_03465 PF00156 Phosphoribosyl transferase domain FY131_03470 PF02674 Colicin V production protein FY131_03475 PF06745 KaiC FY131_03475 PF18073 Rubredoxin metal binding domain FY131_03485 PF01168 Alanine racemase, N-terminal domain FY131_03485 PF00842 Alanine racemase, C-terminal domain FY131_03490 PF12852 Cupin FY131_03490 PF12833 Helix-turn-helix domain FY131_03495 PF03591 AzlC protein FY131_03505 PF03796 DnaB-like helicase C terminal domain FY131_03505 PF00772 DnaB-like helicase N terminal domain FY131_03515 PF01047 MarR family FY131_03525 PF13533 Biotin-lipoyl like FY131_03530 PF03948 Ribosomal protein L9, C-terminal domain FY131_03530 PF01281 Ribosomal protein L9, N-terminal domain FY131_03540 PF01084 Ribosomal protein S18 FY131_03545 PF01250 Ribosomal protein S6 FY131_03550 PF00248 Aldo/keto reductase family FY131_03555 PF00698 Acyl transferase domain FY131_03565 PF00550 Phosphopantetheine attachment site FY131_03570 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_03570 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_03575 PF02618 YceG-like family FY131_03580 PF03755 YicC-like family, N-terminal region FY131_03580 PF08340 Domain of unknown function (DUF1732) FY131_03585 PF00625 Guanylate kinase FY131_03595 PF00398 Ribosomal RNA adenine dimethylase FY131_03600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY131_03610 PF03968 OstA-like protein FY131_03610 PF04453 LPS transport system D FY131_03625 PF02789 Cytosol aminopeptidase family, N-terminal domain FY131_03625 PF00883 Cytosol aminopeptidase family, catalytic domain FY131_03635 PF00563 EAL domain FY131_03635 PF00990 Diguanylate cyclase, GGDEF domain FY131_03635 PF03707 Bacterial signalling protein N terminal repeat FY131_03640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_03645 PF00990 Diguanylate cyclase, GGDEF domain FY131_03645 PF00563 EAL domain FY131_03645 PF13185 GAF domain FY131_03650 PF12848 ABC transporter FY131_03650 PF00005 ABC transporter FY131_03655 PF17158 Membrane-associated sensor, integral membrane domain FY131_03655 PF00990 Diguanylate cyclase, GGDEF domain FY131_03660 PF13417 Glutathione S-transferase, N-terminal domain FY131_03665 PF00334 Nucleoside diphosphate kinase FY131_03685 PF02391 MoaE protein FY131_03695 PF01066 CDP-alcohol phosphatidyltransferase FY131_03700 PF08459 UvrC Helix-hairpin-helix N-terminal FY131_03700 PF01541 GIY-YIG catalytic domain FY131_03700 PF02151 UvrB/uvrC motif FY131_03710 PF13505 Outer membrane protein beta-barrel domain FY131_03715 PF00043 Glutathione S-transferase, C-terminal domain FY131_03715 PF13417 Glutathione S-transferase, N-terminal domain FY131_03720 PF00445 Ribonuclease T2 family FY131_03730 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY131_03735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY131_03735 PF00384 Molybdopterin oxidoreductase FY131_03735 PF01568 Molydopterin dinucleotide binding domain FY131_03740 PF00293 NUDIX domain FY131_03750 PF00551 Formyl transferase FY131_03755 PF00586 AIR synthase related protein, N-terminal domain FY131_03755 PF02769 AIR synthase related protein, C-terminal domain FY131_03760 PF01594 AI-2E family transporter FY131_03770 PF02503 Polyphosphate kinase middle domain FY131_03770 PF13090 Polyphosphate kinase C-terminal domain 2 FY131_03770 PF17941 Polyphosphate kinase C-terminal domain 1 FY131_03770 PF13089 Polyphosphate kinase N-terminal domain FY131_03775 PF02541 Ppx/GppA phosphatase family FY131_03780 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_03800 PF00211 Adenylate and Guanylate cyclase catalytic domain FY131_03810 PF00570 HRDC domain FY131_03810 PF01612 3'-5' exonuclease FY131_03815 PF07690 Major Facilitator Superfamily FY131_03820 PF01336 OB-fold nucleic acid binding domain FY131_03820 PF00152 tRNA synthetases class II (D, K and N) FY131_03820 PF02938 GAD domain FY131_03825 PF06123 Inner membrane protein CreD FY131_03830 PF00916 Sulfate permease family FY131_03830 PF01740 STAS domain FY131_03840 PF00521 DNA gyrase/topoisomerase IV, subunit A FY131_03840 PF03989 DNA gyrase C-terminal domain, beta-propeller FY131_03850 PF04376 Arginine-tRNA-protein transferase, N terminus FY131_03850 PF04377 Arginine-tRNA-protein transferase, C terminus FY131_03860 PF00490 Delta-aminolevulinic acid dehydratase FY131_03880 PF00464 Serine hydroxymethyltransferase FY131_03885 PF03477 ATP cone domain FY131_03890 PF01872 RibD C-terminal domain FY131_03890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY131_03895 PF00677 Lumazine binding domain FY131_03900 PF01810 LysE type translocator FY131_03905 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY131_03910 PF01029 NusB family FY131_03915 PF07690 Major Facilitator Superfamily FY131_03920 PF03030 Inorganic H+ pyrophosphatase FY131_03940 PF02504 Fatty acid synthesis protein FY131_03945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY131_03945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY131_03950 PF00216 Bacterial DNA-binding protein FY131_03955 PF13411 MerR HTH family regulatory protein FY131_03970 PF00403 Heavy-metal-associated domain FY131_03975 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_03975 PF00175 Oxidoreductase NAD-binding domain FY131_03975 PF00970 Oxidoreductase FAD-binding domain FY131_03980 PF09278 MerR, DNA binding FY131_03980 PF00376 MerR family regulatory protein FY131_03985 PF00528 Binding-protein-dependent transport system inner membrane component FY131_03990 PF00528 Binding-protein-dependent transport system inner membrane component FY131_03990 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_03995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_03995 PF00005 ABC transporter FY131_04000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_04000 PF00005 ABC transporter FY131_04005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_04015 PF02386 Cation transport protein FY131_04020 PF00585 C-terminal regulatory domain of Threonine dehydratase FY131_04020 PF00291 Pyridoxal-phosphate dependent enzyme FY131_04030 PF00990 Diguanylate cyclase, GGDEF domain FY131_04030 PF00072 Response regulator receiver domain FY131_04035 PF02525 Flavodoxin-like fold FY131_04040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_04040 PF03466 LysR substrate binding domain FY131_04050 PF02872 5'-nucleotidase, C-terminal domain FY131_04050 PF00149 Calcineurin-like phosphoesterase FY131_04075 PF00581 Rhodanese-like domain FY131_04080 PF02272 DHHA1 domain FY131_04080 PF01411 tRNA synthetases class II (A) FY131_04080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY131_04085 PF00571 CBS domain FY131_04085 PF00291 Pyridoxal-phosphate dependent enzyme FY131_04090 PF00875 DNA photolyase FY131_04090 PF03441 FAD binding domain of DNA photolyase FY131_04100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY131_04100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY131_04130 PF06055 Exopolysaccharide synthesis, ExoD FY131_04135 PF09335 SNARE associated Golgi protein FY131_04150 PF01032 FecCD transport family FY131_04155 PF00005 ABC transporter FY131_04160 PF00127 Copper binding proteins, plastocyanin/azurin family FY131_04165 PF00210 Ferritin-like domain FY131_04200 PF02397 Bacterial sugar transferase FY131_04205 PF00534 Glycosyl transferases group 1 FY131_04230 PF02628 Cytochrome oxidase assembly protein FY131_04235 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY131_04240 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY131_04245 PF00491 Arginase family FY131_04250 PF00380 Ribosomal protein S9/S16 FY131_04255 PF00572 Ribosomal protein L13 FY131_04270 PF13380 CoA binding domain FY131_04275 PF01053 Cys/Met metabolism PLP-dependent enzyme FY131_04285 PF00067 Cytochrome P450 FY131_04290 PF00990 Diguanylate cyclase, GGDEF domain FY131_04295 PF00574 Clp protease FY131_04300 PF06689 ClpX C4-type zinc finger FY131_04300 PF10431 C-terminal, D2-small domain, of ClpB protein FY131_04300 PF07724 AAA domain (Cdc48 subfamily) FY131_04305 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY131_04305 PF05362 Lon protease (S16) C-terminal proteolytic domain FY131_04305 PF00004 ATPase family associated with various cellular activities (AAA) FY131_04310 PF00216 Bacterial DNA-binding protein FY131_04340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY131_04345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY131_04350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY131_04360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY131_04375 PF10531 SLBB domain FY131_04375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY131_04375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY131_04380 PF00384 Molybdopterin oxidoreductase FY131_04380 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY131_04380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY131_04385 PF00146 NADH dehydrogenase FY131_04390 PF12838 4Fe-4S dicluster domain FY131_04395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY131_04400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY131_04405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY131_04405 PF00361 Proton-conducting membrane transporter FY131_04410 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY131_04410 PF00361 Proton-conducting membrane transporter FY131_04415 PF00361 Proton-conducting membrane transporter FY131_04420 PF02237 Biotin protein ligase C terminal domain FY131_04420 PF03099 Biotin/lipoate A/B protein ligase family FY131_04420 PF08279 HTH domain FY131_04425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY131_04425 PF17770 Ribonuclease J C-terminal domain FY131_04425 PF12706 Beta-lactamase superfamily domain FY131_04435 PF03129 Anticodon binding domain FY131_04435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY131_04440 PF02687 FtsX-like permease family FY131_04440 PF12704 MacB-like periplasmic core domain FY131_04445 PF00005 ABC transporter FY131_04450 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY131_04450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY131_04450 PF14579 Helix-hairpin-helix motif FY131_04450 PF02811 PHP domain FY131_04460 PF00817 impB/mucB/samB family FY131_04460 PF11799 impB/mucB/samB family C-terminal domain FY131_04470 PF00072 Response regulator receiver domain FY131_04475 PF00072 Response regulator receiver domain FY131_04475 PF00990 Diguanylate cyclase, GGDEF domain FY131_04480 PF00471 Ribosomal protein L33 FY131_04485 PF07690 Major Facilitator Superfamily FY131_04500 PF08461 Ribonuclease R winged-helix domain FY131_04500 PF00575 S1 RNA binding domain FY131_04500 PF17876 Cold shock domain FY131_04500 PF00773 RNB domain FY131_04500 PF08206 Ribonuclease B OB domain FY131_04505 PF01131 DNA topoisomerase FY131_04505 PF01751 Toprim domain FY131_04505 PF13368 Topoisomerase C-terminal repeat FY131_04505 PF01396 Topoisomerase DNA binding C4 zinc finger FY131_04520 PF02660 Glycerol-3-phosphate acyltransferase FY131_04525 PF01979 Amidohydrolase family FY131_04530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY131_04530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY131_04535 PF18158 Adaptive response protein AidB N-terminal domain FY131_04535 PF02770 Acyl-CoA dehydrogenase, middle domain FY131_04535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY131_04540 PF00583 Acetyltransferase (GNAT) family FY131_04560 PF03652 Holliday junction resolvase FY131_04565 PF08274 PhnA Zinc-Ribbon FY131_04565 PF03831 PhnA domain FY131_04575 PF02686 Glu-tRNAGln amidotransferase C subunit FY131_04580 PF01425 Amidase FY131_04585 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY131_04590 PF00583 Acetyltransferase (GNAT) family FY131_04600 PF02934 GatB/GatE catalytic domain FY131_04600 PF02637 GatB domain FY131_04610 PF00583 Acetyltransferase (GNAT) family FY131_04625 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY131_04630 PF00289 Biotin carboxylase, N-terminal domain FY131_04630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY131_04630 PF02785 Biotin carboxylase C-terminal domain FY131_04635 PF00364 Biotin-requiring enzyme FY131_04640 PF01220 Dehydroquinase class II FY131_04645 PF06965 Na+/H+ antiporter 1 FY131_04645 PF13462 Thioredoxin FY131_04650 PF00155 Aminotransferase class I and II FY131_04675 PF12111 Polyribonucleotide phosphorylase C terminal FY131_04675 PF10150 Ribonuclease E/G family FY131_04675 PF00575 S1 RNA binding domain FY131_04680 PF01520 N-acetylmuramoyl-L-alanine amidase FY131_04685 PF17092 Penicillin-binding protein OB-like domain FY131_04685 PF00912 Transglycosylase FY131_04685 PF00905 Penicillin binding protein transpeptidase domain FY131_04705 PF01513 ATP-NAD kinase FY131_04710 PF02567 Phenazine biosynthesis-like protein FY131_04725 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_04735 PF00809 Pterin binding enzyme FY131_04740 PF02152 Dihydroneopterin aldolase FY131_04745 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY131_04755 PF05128 Domain of unknown function (DUF697) FY131_04760 PF04317 YcjX-like family, DUF463 FY131_04770 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY131_04785 PF00512 His Kinase A (phospho-acceptor) domain FY131_04785 PF08448 PAS fold FY131_04785 PF13188 PAS domain FY131_04785 PF00072 Response regulator receiver domain FY131_04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_04790 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY131_04795 PF10431 C-terminal, D2-small domain, of ClpB protein FY131_04795 PF02861 Clp amino terminal domain, pathogenicity island component FY131_04795 PF00004 ATPase family associated with various cellular activities (AAA) FY131_04795 PF07724 AAA domain (Cdc48 subfamily) FY131_04795 PF17871 AAA lid domain FY131_04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_04815 PF03466 LysR substrate binding domain FY131_04825 PF01230 HIT domain FY131_04850 PF00318 Ribosomal protein S2 FY131_04855 PF00889 Elongation factor TS FY131_04860 PF00696 Amino acid kinase family FY131_04865 PF01765 Ribosome recycling factor FY131_04870 PF01255 Putative undecaprenyl diphosphate synthase FY131_04880 PF17820 PDZ domain FY131_04880 PF02163 Peptidase family M50 FY131_04885 PF01103 Surface antigen FY131_04885 PF07244 Surface antigen variable number repeat FY131_04890 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_04890 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY131_04895 PF07977 FabA-like domain FY131_04900 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY131_04900 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_04905 PF06230 LpxI C-terminal domain FY131_04905 PF17930 LpxI N-terminal domain FY131_04910 PF02684 Lipid-A-disaccharide synthetase FY131_04915 PF00285 Citrate synthase, C-terminal domain FY131_04930 PF01726 LexA DNA binding domain FY131_04930 PF00717 Peptidase S24-like FY131_04940 PF00793 DAHP synthetase I family FY131_04945 PF00113 Enolase, C-terminal TIM barrel domain FY131_04945 PF03952 Enolase, N-terminal domain FY131_04955 PF00676 Dehydrogenase E1 component FY131_04960 PF02780 Transketolase, C-terminal domain FY131_04960 PF02779 Transketolase, pyrimidine binding domain FY131_04960 PF00364 Biotin-requiring enzyme FY131_04965 PF00364 Biotin-requiring enzyme FY131_04965 PF02817 e3 binding domain FY131_04965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY131_04975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY131_04975 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_04985 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY131_04985 PF04055 Radical SAM superfamily FY131_04990 PF00892 EamA-like transporter family FY131_05005 PF03364 Polyketide cyclase / dehydrase and lipid transport FY131_05010 PF02464 Competence-damaged protein FY131_05015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY131_05015 PF02542 YgbB family FY131_05020 PF01207 Dihydrouridine synthase (Dus) FY131_05025 PF00989 PAS fold FY131_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_05025 PF00512 His Kinase A (phospho-acceptor) domain FY131_05030 PF00072 Response regulator receiver domain FY131_05030 PF00158 Sigma-54 interaction domain FY131_05030 PF02954 Bacterial regulatory protein, Fis family FY131_05035 PF00672 HAMP domain FY131_05035 PF00512 His Kinase A (phospho-acceptor) domain FY131_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_05035 PF00989 PAS fold FY131_05040 PF00072 Response regulator receiver domain FY131_05040 PF00158 Sigma-54 interaction domain FY131_05040 PF02954 Bacterial regulatory protein, Fis family FY131_05045 PF02080 TrkA-C domain FY131_05045 PF02254 TrkA-N domain FY131_05050 PF17209 Hfq protein FY131_05055 PF01926 50S ribosome-binding GTPase FY131_05055 PF16360 GTP-binding GTPase Middle Region FY131_05055 PF13167 GTP-binding GTPase N-terminal FY131_05060 PF03819 MazG nucleotide pyrophosphohydrolase domain FY131_05070 PF10414 Sirohaem synthase dimerisation region FY131_05070 PF14824 Sirohaem biosynthesis protein central FY131_05070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_05090 PF00970 Oxidoreductase FAD-binding domain FY131_05090 PF00175 Oxidoreductase NAD-binding domain FY131_05095 PF07690 Major Facilitator Superfamily FY131_05110 PF02347 Glycine cleavage system P-protein FY131_05115 PF01597 Glycine cleavage H-protein FY131_05120 PF01571 Aminomethyltransferase folate-binding domain FY131_05120 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY131_05150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY131_05155 PF01479 S4 domain FY131_05155 PF00849 RNA pseudouridylate synthase FY131_05160 PF13419 Haloacid dehalogenase-like hydrolase FY131_05180 PF00756 Putative esterase FY131_05190 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY131_05200 PF00578 AhpC/TSA family FY131_05200 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY131_05205 PF00043 Glutathione S-transferase, C-terminal domain FY131_05205 PF02798 Glutathione S-transferase, N-terminal domain FY131_05225 PF08281 Sigma-70, region 4 FY131_05225 PF04542 Sigma-70 region 2 FY131_05255 PF03466 LysR substrate binding domain FY131_05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_05260 PF04303 PrpF protein FY131_05270 PF00005 ABC transporter FY131_05275 PF00528 Binding-protein-dependent transport system inner membrane component FY131_05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_05280 PF13426 PAS domain FY131_05280 PF00072 Response regulator receiver domain FY131_05285 PF00072 Response regulator receiver domain FY131_05290 PF07536 HWE histidine kinase FY131_05290 PF13426 PAS domain FY131_05290 PF08447 PAS fold FY131_05295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_05295 PF00072 Response regulator receiver domain FY131_05295 PF13426 PAS domain FY131_05305 PF00034 Cytochrome c FY131_05315 PF05199 GMC oxidoreductase FY131_05315 PF00732 GMC oxidoreductase FY131_05325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_05325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_05335 PF00356 Bacterial regulatory proteins, lacI family FY131_05340 PF02653 Branched-chain amino acid transport system / permease component FY131_05345 PF02653 Branched-chain amino acid transport system / permease component FY131_05350 PF00005 ABC transporter FY131_05355 PF13407 Periplasmic binding protein domain FY131_05360 PF00075 RNase H FY131_05370 PF13649 Methyltransferase domain FY131_05375 PF00654 Voltage gated chloride channel FY131_05380 PF12706 Beta-lactamase superfamily domain FY131_05380 PF03099 Biotin/lipoate A/B protein ligase family FY131_05385 PF01026 TatD related DNase FY131_05390 PF08264 Anticodon-binding domain of tRNA FY131_05390 PF09334 tRNA synthetases class I (M) FY131_05395 PF09115 DNA polymerase III, delta subunit, C terminal FY131_05400 PF02223 Thymidylate kinase FY131_05405 PF07943 Penicillin-binding protein 5, C-terminal domain FY131_05405 PF00768 D-alanyl-D-alanine carboxypeptidase FY131_05410 PF03330 Lytic transglycolase FY131_05410 PF05036 Sporulation related domain FY131_05425 PF01757 Acyltransferase family FY131_05435 PF01757 Acyltransferase family FY131_05485 PF03989 DNA gyrase C-terminal domain, beta-propeller FY131_05485 PF00521 DNA gyrase/topoisomerase IV, subunit A FY131_05490 PF01914 MarC family integral membrane protein FY131_05495 PF00571 CBS domain FY131_05495 PF01368 DHH family FY131_05495 PF02272 DHHA1 domain FY131_05495 PF01743 Poly A polymerase head domain FY131_05500 PF00436 Single-strand binding protein family FY131_05505 PF17755 UvrA DNA-binding domain FY131_05505 PF17760 UvrA interaction domain FY131_05515 PF01207 Dihydrouridine synthase (Dus) FY131_05525 PF05974 Domain of unknown function (DUF892) FY131_05530 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY131_05535 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_05545 PF00950 ABC 3 transport family FY131_05550 PF00005 ABC transporter FY131_05555 PF01297 Zinc-uptake complex component A periplasmic FY131_05570 PF00248 Aldo/keto reductase family FY131_05580 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY131_05580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY131_05585 PF03597 Cytochrome oxidase maturation protein cbb3-type FY131_05595 PF05751 FixH FY131_05600 PF13746 4Fe-4S dicluster domain FY131_05600 PF12801 4Fe-4S binding domain FY131_05600 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY131_05615 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY131_05615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY131_05630 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY131_05635 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY131_05650 PF00376 MerR family regulatory protein FY131_05650 PF09278 MerR, DNA binding FY131_05655 PF00571 CBS domain FY131_05655 PF01769 Divalent cation transporter FY131_05655 PF03448 MgtE intracellular N domain FY131_05660 PF00384 Molybdopterin oxidoreductase FY131_05670 PF01327 Polypeptide deformylase FY131_05690 PF03099 Biotin/lipoate A/B protein ligase family FY131_05695 PF08240 Alcohol dehydrogenase GroES-like domain FY131_05695 PF00107 Zinc-binding dehydrogenase FY131_05720 PF07549 SecD/SecF GG Motif FY131_05720 PF02355 Protein export membrane protein FY131_05725 PF02699 Preprotein translocase subunit FY131_05735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY131_05735 PF08240 Alcohol dehydrogenase GroES-like domain FY131_05745 PF00067 Cytochrome P450 FY131_05755 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_05755 PF06426 Serine acetyltransferase, N-terminal FY131_05760 PF00561 alpha/beta hydrolase fold FY131_05770 PF01494 FAD binding domain FY131_05775 PF01053 Cys/Met metabolism PLP-dependent enzyme FY131_05780 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_05785 PF00528 Binding-protein-dependent transport system inner membrane component FY131_05790 PF00528 Binding-protein-dependent transport system inner membrane component FY131_05795 PF00005 ABC transporter FY131_05810 PF01368 DHH family FY131_05810 PF02272 DHHA1 domain FY131_05810 PF17768 RecJ OB domain FY131_05820 PF03447 Homoserine dehydrogenase, NAD binding domain FY131_05820 PF01842 ACT domain FY131_05820 PF00742 Homoserine dehydrogenase FY131_05825 PF00155 Aminotransferase class I and II FY131_05830 PF01156 Inosine-uridine preferring nucleoside hydrolase FY131_05835 PF01925 Sulfite exporter TauE/SafE FY131_05850 PF08240 Alcohol dehydrogenase GroES-like domain FY131_05850 PF00107 Zinc-binding dehydrogenase FY131_05855 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_05855 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_05870 PF07977 FabA-like domain FY131_05875 PF00550 Phosphopantetheine attachment site FY131_05880 PF04055 Radical SAM superfamily FY131_05885 PF00027 Cyclic nucleotide-binding domain FY131_05885 PF13545 Crp-like helix-turn-helix domain FY131_05895 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY131_05900 PF17746 SfsA N-terminal OB domain FY131_05900 PF03749 Sugar fermentation stimulation protein RE domain FY131_05905 PF00557 Metallopeptidase family M24 FY131_05910 PF04002 RadC-like JAB domain FY131_05925 PF01474 Class-II DAHP synthetase family FY131_05930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_05930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY131_05940 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY131_05945 PF13419 Haloacid dehalogenase-like hydrolase FY131_05960 PF10415 Fumarase C C-terminus FY131_05960 PF00206 Lyase FY131_05970 PF06418 CTP synthase N-terminus FY131_05970 PF00117 Glutamine amidotransferase class-I FY131_05975 PF03840 Preprotein translocase SecG subunit FY131_05980 PF00121 Triosephosphate isomerase FY131_05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_05990 PF00986 DNA gyrase B subunit, carboxyl terminus FY131_05990 PF01751 Toprim domain FY131_05990 PF00204 DNA gyrase B FY131_05995 PF00574 Clp protease FY131_06005 PF01022 Bacterial regulatory protein, arsR family FY131_06010 PF13091 PLD-like domain FY131_06015 PF00072 Response regulator receiver domain FY131_06020 PF01266 FAD dependent oxidoreductase FY131_06020 PF16350 FAD dependent oxidoreductase central domain FY131_06020 PF01571 Aminomethyltransferase folate-binding domain FY131_06020 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY131_06030 PF00924 Mechanosensitive ion channel FY131_06030 PF12795 Mechanosensitive ion channel porin domain FY131_06030 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY131_06095 PF00005 ABC transporter FY131_06100 PF02405 Permease MlaE FY131_06105 PF13378 Enolase C-terminal domain-like FY131_06105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_06115 PF01515 Phosphate acetyl/butaryl transferase FY131_06115 PF03949 Malic enzyme, NAD binding domain FY131_06115 PF00390 Malic enzyme, N-terminal domain FY131_06125 PF00881 Nitroreductase family FY131_06130 PF07676 WD40-like Beta Propeller Repeat FY131_06140 PF00795 Carbon-nitrogen hydrolase FY131_06140 PF02540 NAD synthase FY131_06145 PF00884 Sulfatase FY131_06155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_06155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY131_06175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY131_06175 PF05698 Bacterial trigger factor protein (TF) C-terminus FY131_06175 PF05697 Bacterial trigger factor protein (TF) FY131_06195 PF01134 Glucose inhibited division protein A FY131_06215 PF08240 Alcohol dehydrogenase GroES-like domain FY131_06215 PF00107 Zinc-binding dehydrogenase FY131_06225 PF00550 Phosphopantetheine attachment site FY131_06230 PF00501 AMP-binding enzyme FY131_06230 PF13193 AMP-binding enzyme C-terminal domain FY131_06230 PF00668 Condensation domain FY131_06230 PF00550 Phosphopantetheine attachment site FY131_06230 PF00975 Thioesterase domain FY131_06240 PF04715 Anthranilate synthase component I, N terminal region FY131_06240 PF00425 chorismate binding enzyme FY131_06240 PF00117 Glutamine amidotransferase class-I FY131_06245 PF01702 Queuine tRNA-ribosyltransferase FY131_06250 PF02547 Queuosine biosynthesis protein FY131_06255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY131_06260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY131_06265 PF01467 Cytidylyltransferase-like FY131_06280 PF00591 Glycosyl transferase family, a/b domain FY131_06280 PF02885 Glycosyl transferase family, helical bundle domain FY131_06285 PF00218 Indole-3-glycerol phosphate synthase FY131_06290 PF01967 MoaC family FY131_06295 PF03453 MoeA N-terminal region (domain I and II) FY131_06295 PF00994 Probable molybdopterin binding domain FY131_06295 PF03454 MoeA C-terminal region (domain IV) FY131_06300 PF17158 Membrane-associated sensor, integral membrane domain FY131_06300 PF00990 Diguanylate cyclase, GGDEF domain FY131_06310 PF00999 Sodium/hydrogen exchanger family FY131_06310 PF02254 TrkA-N domain FY131_06320 PF06463 Molybdenum Cofactor Synthesis C FY131_06320 PF04055 Radical SAM superfamily FY131_06325 PF00892 EamA-like transporter family FY131_06330 PF07690 Major Facilitator Superfamily FY131_06335 PF12804 MobA-like NTP transferase domain FY131_06340 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY131_06345 PF01551 Peptidase family M23 FY131_06355 PF01975 Survival protein SurE FY131_06360 PF02403 Seryl-tRNA synthetase N-terminal domain FY131_06360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY131_06365 PF00902 Sec-independent protein translocase protein (TatC) FY131_06370 PF02416 mttA/Hcf106 family FY131_06375 PF02416 mttA/Hcf106 family FY131_06380 PF04079 Segregation and condensation complex subunit ScpB FY131_06385 PF02616 Segregation and condensation protein ScpA FY131_06390 PF00933 Glycosyl hydrolase family 3 N terminal domain FY131_06400 PF05746 DALR anticodon binding domain FY131_06400 PF03485 Arginyl tRNA synthetase N terminal domain FY131_06400 PF00750 tRNA synthetases class I (R) FY131_06405 PF13286 Phosphohydrolase-associated domain FY131_06405 PF01966 HD domain FY131_06410 PF01521 Iron-sulphur cluster biosynthesis FY131_06420 PF08238 Sel1 repeat FY131_06435 PF00133 tRNA synthetases class I (I, L, M and V) FY131_06435 PF08264 Anticodon-binding domain of tRNA FY131_06435 PF10458 Valyl tRNA synthetase tRNA binding arm FY131_06470 PF03358 NADPH-dependent FMN reductase FY131_06475 PF02464 Competence-damaged protein FY131_06475 PF00994 Probable molybdopterin binding domain FY131_06475 PF18146 Damage-inducible protein CinA KH domain FY131_06480 PF00582 Universal stress protein family FY131_06485 PF00156 Phosphoribosyl transferase domain FY131_06495 PF02867 Ribonucleotide reductase, barrel domain FY131_06495 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY131_06510 PF01566 Natural resistance-associated macrophage protein FY131_06520 PF00005 ABC transporter FY131_06520 PF00664 ABC transporter transmembrane region FY131_06525 PF01594 AI-2E family transporter FY131_06530 PF00583 Acetyltransferase (GNAT) family FY131_06560 PF03129 Anticodon binding domain FY131_06560 PF02824 TGS domain FY131_06560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY131_06560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY131_06570 PF01809 Putative membrane protein insertion efficiency factor FY131_06580 PF01227 GTP cyclohydrolase I FY131_06585 PF01502 Phosphoribosyl-AMP cyclohydrolase FY131_06590 PF01734 Patatin-like phospholipase FY131_06595 PF00478 IMP dehydrogenase / GMP reductase domain FY131_06595 PF00571 CBS domain FY131_06625 PF03313 Serine dehydratase alpha chain FY131_06625 PF03315 Serine dehydratase beta chain FY131_06660 PF03466 LysR substrate binding domain FY131_06660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_06670 PF01965 DJ-1/PfpI family FY131_06670 PF12833 Helix-turn-helix domain FY131_06675 PF03853 YjeF-related protein N-terminus FY131_06675 PF01256 Carbohydrate kinase FY131_06680 PF00543 Nitrogen regulatory protein P-II FY131_06685 PF03951 Glutamine synthetase, beta-Grasp domain FY131_06685 PF00120 Glutamine synthetase, catalytic domain FY131_06695 PF08755 Hemimethylated DNA-binding protein YccV like FY131_06705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_06715 PF00892 EamA-like transporter family FY131_06725 PF00271 Helicase conserved C-terminal domain FY131_06725 PF02559 CarD-like/TRCF domain FY131_06725 PF00270 DEAD/DEAH box helicase FY131_06725 PF17757 UvrB interaction domain FY131_06725 PF03461 TRCF domain FY131_06735 PF17191 RecG wedge domain FY131_06735 PF00271 Helicase conserved C-terminal domain FY131_06735 PF00270 DEAD/DEAH box helicase FY131_06750 PF01850 PIN domain FY131_06765 PF01380 SIS domain FY131_06770 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_06770 PF14602 Hexapeptide repeat of succinyl-transferase FY131_06770 PF12804 MobA-like NTP transferase domain FY131_06775 PF07729 FCD domain FY131_06775 PF00392 Bacterial regulatory proteins, gntR family FY131_06780 PF02608 ABC transporter substrate-binding protein PnrA-like FY131_06785 PF02653 Branched-chain amino acid transport system / permease component FY131_06790 PF02653 Branched-chain amino acid transport system / permease component FY131_06795 PF00005 ABC transporter FY131_06805 PF01494 FAD binding domain FY131_06810 PF03547 Membrane transport protein FY131_06815 PF02683 Cytochrome C biogenesis protein transmembrane region FY131_06830 PF12900 Pyridoxamine 5'-phosphate oxidase FY131_06845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_06850 PF00313 'Cold-shock' DNA-binding domain FY131_06900 PF12704 MacB-like periplasmic core domain FY131_06900 PF02687 FtsX-like permease family FY131_06900 PF00005 ABC transporter FY131_06905 PF12704 MacB-like periplasmic core domain FY131_06905 PF02687 FtsX-like permease family FY131_06905 PF00005 ABC transporter FY131_06915 PF01521 Iron-sulphur cluster biosynthesis FY131_06920 PF01883 Iron-sulfur cluster assembly protein FY131_06925 PF00266 Aminotransferase class-V FY131_06930 PF01458 Uncharacterized protein family (UPF0051) FY131_06935 PF00005 ABC transporter FY131_06940 PF01458 Uncharacterized protein family (UPF0051) FY131_06945 PF00266 Aminotransferase class-V FY131_06950 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY131_06955 PF03702 Anhydro-N-acetylmuramic acid kinase FY131_06960 PF00579 tRNA synthetases class I (W and Y) FY131_06970 PF00578 AhpC/TSA family FY131_06975 PF04305 Protein of unknown function (DUF455) FY131_06980 PF08525 Opacity-associated protein A N-terminal motif FY131_06980 PF01551 Peptidase family M23 FY131_06980 PF01476 LysM domain FY131_06985 PF00271 Helicase conserved C-terminal domain FY131_06985 PF00270 DEAD/DEAH box helicase FY131_07000 PF00834 Ribulose-phosphate 3 epimerase family FY131_07010 PF00206 Lyase FY131_07010 PF10397 Adenylosuccinate lyase C-terminus FY131_07020 PF01259 SAICAR synthetase FY131_07025 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY131_07045 PF00155 Aminotransferase class I and II FY131_07045 PF00392 Bacterial regulatory proteins, gntR family FY131_07055 PF00586 AIR synthase related protein, N-terminal domain FY131_07055 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY131_07055 PF02769 AIR synthase related protein, C-terminal domain FY131_07075 PF00462 Glutaredoxin FY131_07080 PF07690 Major Facilitator Superfamily FY131_07085 PF00459 Inositol monophosphatase family FY131_07090 PF00459 Inositol monophosphatase family FY131_07095 PF01171 PP-loop family FY131_07100 PF04960 Glutaminase FY131_07105 PF01479 S4 domain FY131_07105 PF00163 Ribosomal protein S4/S9 N-terminal domain FY131_07110 PF03741 Integral membrane protein TerC family FY131_07125 PF00892 EamA-like transporter family FY131_07130 PF01810 LysE type translocator FY131_07140 PF01177 Asp/Glu/Hydantoin racemase FY131_07145 PF00588 SpoU rRNA Methylase family FY131_07155 PF00180 Isocitrate/isopropylmalate dehydrogenase FY131_07170 PF02272 DHHA1 domain FY131_07170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY131_07170 PF01411 tRNA synthetases class II (A) FY131_07175 PF00154 recA bacterial DNA recombination protein FY131_07180 PF00294 pfkB family carbohydrate kinase FY131_07185 PF04227 Indigoidine synthase A like protein FY131_07190 PF00691 OmpA family FY131_07190 PF01389 OmpA-like transmembrane domain FY131_07195 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_07200 PF00528 Binding-protein-dependent transport system inner membrane component FY131_07205 PF00528 Binding-protein-dependent transport system inner membrane component FY131_07210 PF06233 Usg-like family FY131_07215 PF08241 Methyltransferase domain FY131_07220 PF09084 NMT1/THI5 like FY131_07225 PF01037 Lrp/AsnC ligand binding domain FY131_07225 PF13404 AsnC-type helix-turn-helix domain FY131_07230 PF03167 Uracil DNA glycosylase superfamily FY131_07240 PF00989 PAS fold FY131_07240 PF00512 His Kinase A (phospho-acceptor) domain FY131_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_07245 PF01219 Prokaryotic diacylglycerol kinase FY131_07250 PF02277 Phosphoribosyltransferase FY131_07255 PF02654 Cobalamin-5-phosphate synthase FY131_07270 PF01061 ABC-2 type transporter FY131_07275 PF00005 ABC transporter FY131_07280 PF01925 Sulfite exporter TauE/SafE FY131_07290 PF00672 HAMP domain FY131_07290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_07290 PF17200 Single Cache domain 2 FY131_07290 PF17200 Single Cache domain 2 FY131_07290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_07290 PF00672 HAMP domain FY131_07300 PF12002 MgsA AAA+ ATPase C terminal FY131_07300 PF16193 AAA C-terminal domain FY131_07300 PF00004 ATPase family associated with various cellular activities (AAA) FY131_07305 PF13180 PDZ domain FY131_07305 PF00595 PDZ domain FY131_07320 PF00920 Dehydratase family FY131_07325 PF00174 Oxidoreductase molybdopterin binding domain FY131_07330 PF01794 Ferric reductase like transmembrane component FY131_07340 PF05675 Protein of unknown function (DUF817) FY131_07350 PF01196 Ribosomal protein L17 FY131_07355 PF01000 RNA polymerase Rpb3/RpoA insert domain FY131_07355 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY131_07355 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY131_07360 PF00411 Ribosomal protein S11 FY131_07365 PF00416 Ribosomal protein S13/S18 FY131_07375 PF00344 SecY translocase FY131_07380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY131_07385 PF00327 Ribosomal protein L30p/L7e FY131_07390 PF00333 Ribosomal protein S5, N-terminal domain FY131_07390 PF03719 Ribosomal protein S5, C-terminal domain FY131_07395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY131_07400 PF00347 Ribosomal protein L6 FY131_07405 PF00410 Ribosomal protein S8 FY131_07410 PF00253 Ribosomal protein S14p/S29e FY131_07415 PF00673 ribosomal L5P family C-terminus FY131_07415 PF00281 Ribosomal protein L5 FY131_07420 PF00467 KOW motif FY131_07420 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY131_07425 PF00238 Ribosomal protein L14p/L23e FY131_07430 PF00366 Ribosomal protein S17 FY131_07435 PF00831 Ribosomal L29 protein FY131_07440 PF00252 Ribosomal protein L16p/L10e FY131_07445 PF07650 KH domain FY131_07445 PF00189 Ribosomal protein S3, C-terminal domain FY131_07450 PF00237 Ribosomal protein L22p/L17e FY131_07455 PF00203 Ribosomal protein S19 FY131_07460 PF00181 Ribosomal Proteins L2, RNA binding domain FY131_07460 PF03947 Ribosomal Proteins L2, C-terminal domain FY131_07465 PF00276 Ribosomal protein L23 FY131_07470 PF00573 Ribosomal protein L4/L1 family FY131_07475 PF00297 Ribosomal protein L3 FY131_07480 PF00338 Ribosomal protein S10p/S20e FY131_07485 PF03143 Elongation factor Tu C-terminal domain FY131_07485 PF03144 Elongation factor Tu domain 2 FY131_07485 PF00009 Elongation factor Tu GTP binding domain FY131_07490 PF03144 Elongation factor Tu domain 2 FY131_07490 PF00009 Elongation factor Tu GTP binding domain FY131_07490 PF03764 Elongation factor G, domain IV FY131_07490 PF14492 Elongation Factor G, domain II FY131_07490 PF00679 Elongation factor G C-terminus FY131_07495 PF00177 Ribosomal protein S7p/S5e FY131_07500 PF00164 Ribosomal protein S12/S23 FY131_07515 PF00623 RNA polymerase Rpb1, domain 2 FY131_07515 PF04983 RNA polymerase Rpb1, domain 3 FY131_07515 PF04998 RNA polymerase Rpb1, domain 5 FY131_07515 PF04997 RNA polymerase Rpb1, domain 1 FY131_07515 PF05000 RNA polymerase Rpb1, domain 4 FY131_07520 PF04563 RNA polymerase beta subunit FY131_07520 PF04561 RNA polymerase Rpb2, domain 2 FY131_07520 PF04565 RNA polymerase Rpb2, domain 3 FY131_07520 PF10385 RNA polymerase beta subunit external 1 domain FY131_07520 PF00562 RNA polymerase Rpb2, domain 6 FY131_07520 PF04560 RNA polymerase Rpb2, domain 7 FY131_07530 PF00542 Ribosomal protein L7/L12 C-terminal domain FY131_07530 PF16320 Ribosomal protein L7/L12 dimerisation domain FY131_07535 PF00466 Ribosomal protein L10 FY131_07540 PF00687 Ribosomal protein L1p/L10e family FY131_07545 PF03946 Ribosomal protein L11, N-terminal domain FY131_07545 PF00298 Ribosomal protein L11, RNA binding domain FY131_07550 PF00467 KOW motif FY131_07550 PF02357 Transcription termination factor nusG FY131_07555 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY131_07570 PF03143 Elongation factor Tu C-terminal domain FY131_07570 PF03144 Elongation factor Tu domain 2 FY131_07570 PF00009 Elongation factor Tu GTP binding domain FY131_07575 PF03741 Integral membrane protein TerC family FY131_07605 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY131_07605 PF00588 SpoU rRNA Methylase family FY131_07610 PF03061 Thioesterase superfamily FY131_07635 PF13460 NAD(P)H-binding FY131_07640 PF01638 HxlR-like helix-turn-helix FY131_07650 PF17757 UvrB interaction domain FY131_07650 PF00271 Helicase conserved C-terminal domain FY131_07650 PF04851 Type III restriction enzyme, res subunit FY131_07650 PF02151 UvrB/uvrC motif FY131_07650 PF12344 Ultra-violet resistance protein B FY131_07655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY131_07655 PF00756 Putative esterase FY131_07675 PF00226 DnaJ domain FY131_07675 PF01556 DnaJ C terminal domain FY131_07675 PF00684 DnaJ central domain FY131_07685 PF00589 Phage integrase family FY131_07790 PF17151 Periplasmic sensor domain FY131_07790 PF00990 Diguanylate cyclase, GGDEF domain FY131_07800 PF00005 ABC transporter FY131_07800 PF08402 TOBE domain FY131_07810 PF01547 Bacterial extracellular solute-binding protein FY131_07815 PF00155 Aminotransferase class I and II FY131_07830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY131_07830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY131_07835 PF00440 Bacterial regulatory proteins, tetR family FY131_07840 PF06719 AraC-type transcriptional regulator N-terminus FY131_07840 PF12833 Helix-turn-helix domain FY131_07845 PF00107 Zinc-binding dehydrogenase FY131_07845 PF08240 Alcohol dehydrogenase GroES-like domain FY131_07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_07855 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY131_07860 PF03472 Autoinducer binding domain FY131_07860 PF00196 Bacterial regulatory proteins, luxR family FY131_07865 PF14490 Helix-hairpin-helix containing domain FY131_07865 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY131_07865 PF13538 UvrD-like helicase C-terminal domain FY131_07870 PF08338 Domain of unknown function (DUF1731) FY131_07870 PF01370 NAD dependent epimerase/dehydratase family FY131_07895 PF04542 Sigma-70 region 2 FY131_07895 PF08281 Sigma-70, region 4 FY131_07905 PF01810 LysE type translocator FY131_07910 PF00248 Aldo/keto reductase family FY131_07925 PF10369 Small subunit of acetolactate synthase FY131_07930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY131_07930 PF00205 Thiamine pyrophosphate enzyme, central domain FY131_07930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY131_07950 PF13302 Acetyltransferase (GNAT) domain FY131_07960 PF13180 PDZ domain FY131_07965 PF01145 SPFH domain / Band 7 family FY131_07970 PF01145 SPFH domain / Band 7 family FY131_07975 PF00186 Dihydrofolate reductase FY131_07980 PF00303 Thymidylate synthase FY131_08020 PF02913 FAD linked oxidases, C-terminal domain FY131_08020 PF01565 FAD binding domain FY131_08025 PF00873 AcrB/AcrD/AcrF family FY131_08030 PF13533 Biotin-lipoyl like FY131_08040 PF00580 UvrD/REP helicase N-terminal domain FY131_08040 PF13361 UvrD-like helicase C-terminal domain FY131_08050 PF13977 BetI-type transcriptional repressor, C-terminal FY131_08050 PF00440 Bacterial regulatory proteins, tetR family FY131_08055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY131_08060 PF00561 alpha/beta hydrolase fold FY131_08080 PF00857 Isochorismatase family FY131_08100 PF01321 Creatinase/Prolidase N-terminal domain FY131_08100 PF00557 Metallopeptidase family M24 FY131_08110 PF02630 SCO1/SenC FY131_08120 PF01584 CheW-like domain FY131_08130 PF00929 Exonuclease FY131_08135 PF03466 LysR substrate binding domain FY131_08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_08145 PF00583 Acetyltransferase (GNAT) family FY131_08155 PF12826 Helix-hairpin-helix motif FY131_08155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY131_08155 PF00533 BRCA1 C Terminus (BRCT) domain FY131_08155 PF01653 NAD-dependent DNA ligase adenylation domain FY131_08155 PF03120 NAD-dependent DNA ligase OB-fold domain FY131_08170 PF02463 RecF/RecN/SMC N terminal domain FY131_08175 PF13525 Outer membrane lipoprotein FY131_08180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY131_08185 PF12327 FtsZ family, C-terminal domain FY131_08185 PF00091 Tubulin/FtsZ family, GTPase domain FY131_08190 PF02491 SHS2 domain inserted in FTSA FY131_08195 PF08478 POTRA domain, FtsQ-type FY131_08195 PF03799 Cell division protein FtsQ FY131_08200 PF07478 D-ala D-ala ligase C-terminus FY131_08200 PF01820 D-ala D-ala ligase N-terminus FY131_08205 PF07690 Major Facilitator Superfamily FY131_08205 PF00083 Sugar (and other) transporter FY131_08210 PF00990 Diguanylate cyclase, GGDEF domain FY131_08215 PF01565 FAD binding domain FY131_08215 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY131_08220 PF01225 Mur ligase family, catalytic domain FY131_08220 PF02875 Mur ligase family, glutamate ligase domain FY131_08220 PF08245 Mur ligase middle domain FY131_08225 PF04101 Glycosyltransferase family 28 C-terminal domain FY131_08225 PF03033 Glycosyltransferase family 28 N-terminal domain FY131_08230 PF01098 Cell cycle protein FY131_08235 PF02875 Mur ligase family, glutamate ligase domain FY131_08235 PF08245 Mur ligase middle domain FY131_08240 PF00953 Glycosyl transferase family 4 FY131_08240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY131_08245 PF08245 Mur ligase middle domain FY131_08245 PF02875 Mur ligase family, glutamate ligase domain FY131_08245 PF01225 Mur ligase family, catalytic domain FY131_08250 PF01225 Mur ligase family, catalytic domain FY131_08250 PF02875 Mur ligase family, glutamate ligase domain FY131_08250 PF08245 Mur ligase middle domain FY131_08255 PF03717 Penicillin-binding Protein dimerisation domain FY131_08255 PF00905 Penicillin binding protein transpeptidase domain FY131_08265 PF01795 MraW methylase family FY131_08270 PF02381 MraZ protein, putative antitoxin-like FY131_08295 PF01510 N-acetylmuramoyl-L-alanine amidase FY131_08300 PF00226 DnaJ domain FY131_08300 PF05099 Tellurite resistance protein TerB FY131_08305 PF00365 Phosphofructokinase FY131_08325 PF13649 Methyltransferase domain FY131_08330 PF01183 Glycosyl hydrolases family 25 FY131_08340 PF02219 Methylenetetrahydrofolate reductase FY131_08345 PF01209 ubiE/COQ5 methyltransferase family FY131_08350 PF00005 ABC transporter FY131_08350 PF12848 ABC transporter FY131_08355 PF12146 Serine aminopeptidase, S33 FY131_08360 PF02515 CoA-transferase family III FY131_08365 PF00205 Thiamine pyrophosphate enzyme, central domain FY131_08365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY131_08365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY131_08375 PF01042 Endoribonuclease L-PSP FY131_08390 PF01476 LysM domain FY131_08390 PF03734 L,D-transpeptidase catalytic domain FY131_08395 PF07690 Major Facilitator Superfamily FY131_08405 PF10609 NUBPL iron-transfer P-loop NTPase FY131_08415 PF00465 Iron-containing alcohol dehydrogenase FY131_08420 PF00171 Aldehyde dehydrogenase family FY131_08425 PF03951 Glutamine synthetase, beta-Grasp domain FY131_08425 PF00120 Glutamine synthetase, catalytic domain FY131_08430 PF13520 Amino acid permease FY131_08440 PF01418 Helix-turn-helix domain, rpiR family FY131_08440 PF01380 SIS domain FY131_08460 PF00005 ABC transporter FY131_08460 PF08402 TOBE domain FY131_08465 PF08240 Alcohol dehydrogenase GroES-like domain FY131_08465 PF00107 Zinc-binding dehydrogenase FY131_08480 PF07690 Major Facilitator Superfamily FY131_08485 PF02310 B12 binding domain FY131_08485 PF02607 B12 binding domain FY131_08485 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY131_08485 PF00809 Pterin binding enzyme FY131_08485 PF02574 Homocysteine S-methyltransferase FY131_08505 PF13505 Outer membrane protein beta-barrel domain FY131_08520 PF04402 Protein of unknown function (DUF541) FY131_08530 PF01894 Uncharacterised protein family UPF0047 FY131_08535 PF01590 GAF domain FY131_08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_08535 PF00512 His Kinase A (phospho-acceptor) domain FY131_08535 PF08446 PAS fold FY131_08535 PF00360 Phytochrome region FY131_08545 PF04545 Sigma-70, region 4 FY131_08545 PF04539 Sigma-70 region 3 FY131_08545 PF04542 Sigma-70 region 2 FY131_08545 PF00140 Sigma-70 factor, region 1.2 FY131_08545 PF03979 Sigma-70 factor, region 1.1 FY131_08545 PF04546 Sigma-70, non-essential region FY131_08550 PF10410 DnaB-helicase binding domain of primase FY131_08550 PF08278 DNA primase DnaG DnaB-binding FY131_08550 PF08275 DNA primase catalytic core, N-terminal domain FY131_08550 PF01807 CHC2 zinc finger FY131_08560 PF00117 Glutamine amidotransferase class-I FY131_08560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY131_08565 PF01554 MatE FY131_08570 PF02743 Cache domain FY131_08570 PF00672 HAMP domain FY131_08570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_08580 PF04228 Putative neutral zinc metallopeptidase FY131_08595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY131_08595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY131_08595 PF02142 MGS-like domain FY131_08600 PF17158 Membrane-associated sensor, integral membrane domain FY131_08600 PF00990 Diguanylate cyclase, GGDEF domain FY131_08605 PF03167 Uracil DNA glycosylase superfamily FY131_08615 PF03449 Transcription elongation factor, N-terminal FY131_08615 PF01272 Transcription elongation factor, GreA/GreB, C-term FY131_08620 PF00534 Glycosyl transferases group 1 FY131_08625 PF01037 Lrp/AsnC ligand binding domain FY131_08630 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_08635 PF03466 LysR substrate binding domain FY131_08645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY131_08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_08660 PF03466 LysR substrate binding domain FY131_08670 PF01699 Sodium/calcium exchanger protein FY131_08675 PF00155 Aminotransferase class I and II FY131_08680 PF00563 EAL domain FY131_08680 PF05231 MASE1 FY131_08695 PF00313 'Cold-shock' DNA-binding domain FY131_08700 PF00753 Metallo-beta-lactamase superfamily FY131_08710 PF12802 MarR family FY131_08715 PF00072 Response regulator receiver domain FY131_08715 PF00486 Transcriptional regulatory protein, C terminal FY131_08720 PF00512 His Kinase A (phospho-acceptor) domain FY131_08720 PF16527 Two-component sensor protein CpxA, periplasmic domain FY131_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_08720 PF00672 HAMP domain FY131_08725 PF01588 Putative tRNA binding domain FY131_08730 PF03807 NADP oxidoreductase coenzyme F420-dependent FY131_08730 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY131_08745 PF01790 Prolipoprotein diacylglyceryl transferase FY131_08755 PF02578 Multi-copper polyphenol oxidoreductase laccase FY131_08770 PF14572 Phosphoribosyl synthetase-associated domain FY131_08770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY131_08780 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY131_08790 PF00535 Glycosyl transferase family 2 FY131_08795 PF00672 HAMP domain FY131_08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_08800 PF00171 Aldehyde dehydrogenase family FY131_08805 PF00158 Sigma-54 interaction domain FY131_08805 PF13426 PAS domain FY131_08805 PF02954 Bacterial regulatory protein, Fis family FY131_08810 PF13188 PAS domain FY131_08810 PF03707 Bacterial signalling protein N terminal repeat FY131_08810 PF00990 Diguanylate cyclase, GGDEF domain FY131_08810 PF00563 EAL domain FY131_08815 PF14693 Ribosomal protein TL5, C-terminal domain FY131_08815 PF01386 Ribosomal L25p family FY131_08820 PF08448 PAS fold FY131_08820 PF08447 PAS fold FY131_08820 PF00563 EAL domain FY131_08820 PF00990 Diguanylate cyclase, GGDEF domain FY131_08830 PF01195 Peptidyl-tRNA hydrolase FY131_08840 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY131_08845 PF06071 Protein of unknown function (DUF933) FY131_08845 PF01926 50S ribosome-binding GTPase FY131_08865 PF00156 Phosphoribosyl transferase domain FY131_08875 PF00033 Cytochrome b/b6/petB FY131_08875 PF02167 Cytochrome C1 family FY131_08875 PF00032 Cytochrome b(C-terminal)/b6/petD FY131_08880 PF00033 Cytochrome b/b6/petB FY131_08880 PF00032 Cytochrome b(C-terminal)/b6/petD FY131_08885 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY131_08885 PF00355 Rieske [2Fe-2S] domain FY131_08895 PF00005 ABC transporter FY131_08895 PF00664 ABC transporter transmembrane region FY131_08900 PF00005 ABC transporter FY131_08900 PF00664 ABC transporter transmembrane region FY131_08905 PF00588 SpoU rRNA Methylase family FY131_08910 PF02690 Na+/Pi-cotransporter FY131_08920 PF01218 Coproporphyrinogen III oxidase FY131_08935 PF12627 Probable RNA and SrmB- binding site of polymerase A FY131_08935 PF01743 Poly A polymerase head domain FY131_08935 PF13735 tRNA nucleotidyltransferase domain 2 putative FY131_08940 PF00293 NUDIX domain FY131_08950 PF07726 ATPase family associated with various cellular activities (AAA) FY131_08950 PF17863 AAA lid domain FY131_08970 PF00583 Acetyltransferase (GNAT) family FY131_08975 PF07690 Major Facilitator Superfamily FY131_08985 PF13409 Glutathione S-transferase, N-terminal domain FY131_09000 PF08502 LeuA allosteric (dimerisation) domain FY131_09000 PF00682 HMGL-like FY131_09005 PF03594 Benzoate membrane transport protein FY131_09010 PF06532 Negative regulator of sigma F FY131_09015 PF04542 Sigma-70 region 2 FY131_09015 PF04545 Sigma-70, region 4 FY131_09025 PF00574 Clp protease FY131_09030 PF04955 HupE / UreJ protein FY131_09040 PF14489 QueF-like protein FY131_09045 PF16916 Dimerisation domain of Zinc Transporter FY131_09045 PF01545 Cation efflux family FY131_09055 PF13458 Periplasmic binding protein FY131_09065 PF01022 Bacterial regulatory protein, arsR family FY131_09075 PF00571 CBS domain FY131_09075 PF00005 ABC transporter FY131_09080 PF00528 Binding-protein-dependent transport system inner membrane component FY131_09085 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY131_09090 PF00265 Thymidine kinase FY131_09095 PF00127 Copper binding proteins, plastocyanin/azurin family FY131_09105 PF03472 Autoinducer binding domain FY131_09105 PF00196 Bacterial regulatory proteins, luxR family FY131_09110 PF03350 Uncharacterized protein family, UPF0114 FY131_09115 PF04886 PT repeat FY131_09115 PF00593 TonB dependent receptor FY131_09115 PF07715 TonB-dependent Receptor Plug Domain FY131_09125 PF00117 Glutamine amidotransferase class-I FY131_09125 PF00425 chorismate binding enzyme FY131_09125 PF04715 Anthranilate synthase component I, N terminal region FY131_09130 PF01966 HD domain FY131_09130 PF11871 Domain of unknown function (DUF3391) FY131_09135 PF01979 Amidohydrolase family FY131_09135 PF13382 Adenine deaminase C-terminal domain FY131_09140 PF00583 Acetyltransferase (GNAT) family FY131_09145 PF00128 Alpha amylase, catalytic domain FY131_09150 PF00294 pfkB family carbohydrate kinase FY131_09165 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY131_09165 PF01926 50S ribosome-binding GTPase FY131_09185 PF05992 SbmA/BacA-like family FY131_09195 PF00557 Metallopeptidase family M24 FY131_09215 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_09215 PF01799 [2Fe-2S] binding domain FY131_09220 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY131_09220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY131_09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_09230 PF03466 LysR substrate binding domain FY131_09245 PF01979 Amidohydrolase family FY131_09260 PF01070 FMN-dependent dehydrogenase FY131_09265 PF00893 Small Multidrug Resistance protein FY131_09270 PF17932 Tetracyclin repressor-like, C-terminal domain FY131_09270 PF00440 Bacterial regulatory proteins, tetR family FY131_09275 PF07943 Penicillin-binding protein 5, C-terminal domain FY131_09275 PF00768 D-alanyl-D-alanine carboxypeptidase FY131_09285 PF00576 HIUase/Transthyretin family FY131_09290 PF04115 Ureidoglycolate lyase FY131_09305 PF09349 OHCU decarboxylase FY131_09305 PF01014 Uricase FY131_09315 PF06299 Protein of unknown function (DUF1045) FY131_09320 PF01266 FAD dependent oxidoreductase FY131_09325 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY131_09325 PF01266 FAD dependent oxidoreductase FY131_09330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY131_09330 PF00072 Response regulator receiver domain FY131_09330 PF01627 Hpt domain FY131_09330 PF00512 His Kinase A (phospho-acceptor) domain FY131_09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_09330 PF00672 HAMP domain FY131_09335 PF00270 DEAD/DEAH box helicase FY131_09335 PF00271 Helicase conserved C-terminal domain FY131_09345 PF07681 DoxX FY131_09350 PF03734 L,D-transpeptidase catalytic domain FY131_09350 PF01476 LysM domain FY131_09360 PF14403 Circularly permuted ATP-grasp type 2 FY131_09365 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY131_09365 PF14403 Circularly permuted ATP-grasp type 2 FY131_09370 PF08379 Bacterial transglutaminase-like N-terminal region FY131_09370 PF01841 Transglutaminase-like superfamily FY131_09390 PF00300 Histidine phosphatase superfamily (branch 1) FY131_09400 PF02653 Branched-chain amino acid transport system / permease component FY131_09405 PF00005 ABC transporter FY131_09410 PF13407 Periplasmic binding protein domain FY131_09415 PF03466 LysR substrate binding domain FY131_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_09445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_09445 PF00672 HAMP domain FY131_09450 PF02607 B12 binding domain FY131_09450 PF02574 Homocysteine S-methyltransferase FY131_09450 PF00809 Pterin binding enzyme FY131_09450 PF02310 B12 binding domain FY131_09450 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY131_09455 PF00528 Binding-protein-dependent transport system inner membrane component FY131_09460 PF00528 Binding-protein-dependent transport system inner membrane component FY131_09465 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_09470 PF00005 ABC transporter FY131_09490 PF00331 Glycosyl hydrolase family 10 FY131_09495 PF00535 Glycosyl transferase family 2 FY131_09510 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY131_09525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY131_09525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY131_09525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY131_09525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY131_09530 PF01152 Bacterial-like globin FY131_09550 PF00440 Bacterial regulatory proteins, tetR family FY131_09550 PF08362 YcdC-like protein, C-terminal region FY131_09555 PF07687 Peptidase dimerisation domain FY131_09555 PF01546 Peptidase family M20/M25/M40 FY131_09560 PF01979 Amidohydrolase family FY131_09565 PF00293 NUDIX domain FY131_09570 PF00005 ABC transporter FY131_09575 PF00528 Binding-protein-dependent transport system inner membrane component FY131_09580 PF00528 Binding-protein-dependent transport system inner membrane component FY131_09595 PF00873 AcrB/AcrD/AcrF family FY131_09605 PF00753 Metallo-beta-lactamase superfamily FY131_09610 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY131_09615 PF01730 UreF FY131_09620 PF02814 UreE urease accessory protein, N-terminal domain FY131_09620 PF05194 UreE urease accessory protein, C-terminal domain FY131_09625 PF08534 Redoxin FY131_09635 PF01979 Amidohydrolase family FY131_09635 PF00449 Urease alpha-subunit, N-terminal domain FY131_09645 PF07007 Lysozyme inhibitor LprI FY131_09655 PF00699 Urease beta subunit FY131_09660 PF06906 Protein of unknown function (DUF1272) FY131_09665 PF00547 Urease, gamma subunit FY131_09670 PF01774 UreD urease accessory protein FY131_09680 PF00005 ABC transporter FY131_09685 PF00005 ABC transporter FY131_09685 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY131_09695 PF02653 Branched-chain amino acid transport system / permease component FY131_09705 PF10931 Protein of unknown function (DUF2735) FY131_09710 PF03951 Glutamine synthetase, beta-Grasp domain FY131_09710 PF00120 Glutamine synthetase, catalytic domain FY131_09720 PF00512 His Kinase A (phospho-acceptor) domain FY131_09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_09720 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY131_09720 PF01627 Hpt domain FY131_09720 PF00989 PAS fold FY131_09720 PF00072 Response regulator receiver domain FY131_09725 PF00072 Response regulator receiver domain FY131_09735 PF13458 Periplasmic binding protein FY131_09745 PF00005 ABC transporter FY131_09750 PF00005 ABC transporter FY131_09750 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY131_09755 PF02653 Branched-chain amino acid transport system / permease component FY131_09755 PF11862 Domain of unknown function (DUF3382) FY131_09760 PF02653 Branched-chain amino acid transport system / permease component FY131_09765 PF00459 Inositol monophosphatase family FY131_09795 PF00072 Response regulator receiver domain FY131_09795 PF00486 Transcriptional regulatory protein, C terminal FY131_09815 PF10090 Histidine phosphotransferase C-terminal domain FY131_09830 PF00588 SpoU rRNA Methylase family FY131_09840 PF00849 RNA pseudouridylate synthase FY131_09855 PF00140 Sigma-70 factor, region 1.2 FY131_09855 PF04542 Sigma-70 region 2 FY131_09855 PF04545 Sigma-70, region 4 FY131_09865 PF00709 Adenylosuccinate synthetase FY131_09890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_09900 PF03167 Uracil DNA glycosylase superfamily FY131_09905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_09910 PF04304 Protein of unknown function (DUF454) FY131_09915 PF00005 ABC transporter FY131_09920 PF01032 FecCD transport family FY131_09925 PF01497 Periplasmic binding protein FY131_09935 PF06228 Haem utilisation ChuX/HutX FY131_09945 PF00551 Formyl transferase FY131_09955 PF00672 HAMP domain FY131_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_09955 PF00512 His Kinase A (phospho-acceptor) domain FY131_09960 PF00072 Response regulator receiver domain FY131_09960 PF00486 Transcriptional regulatory protein, C terminal FY131_09970 PF03401 Tripartite tricarboxylate transporter family receptor FY131_09980 PF01970 Tripartite tricarboxylate transporter TctA family FY131_09995 PF01032 FecCD transport family FY131_10000 PF01032 FecCD transport family FY131_10005 PF00005 ABC transporter FY131_10010 PF00210 Ferritin-like domain FY131_10025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_10025 PF00672 HAMP domain FY131_10030 PF00248 Aldo/keto reductase family FY131_10035 PF07690 Major Facilitator Superfamily FY131_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_10040 PF03466 LysR substrate binding domain FY131_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_10045 PF03466 LysR substrate binding domain FY131_10050 PF07859 alpha/beta hydrolase fold FY131_10055 PF13533 Biotin-lipoyl like FY131_10060 PF00873 AcrB/AcrD/AcrF family FY131_10075 PF13091 PLD-like domain FY131_10075 PF13396 Phospholipase_D-nuclease N-terminal FY131_10080 PF08543 Phosphomethylpyrimidine kinase FY131_10085 PF00484 Carbonic anhydrase FY131_10095 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY131_10095 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY131_10105 PF00083 Sugar (and other) transporter FY131_10110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY131_10110 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY131_10110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY131_10115 PF02233 NAD(P) transhydrogenase beta subunit FY131_10120 PF01613 Flavin reductase like domain FY131_10125 PF00881 Nitroreductase family FY131_10130 PF00561 alpha/beta hydrolase fold FY131_10135 PF01042 Endoribonuclease L-PSP FY131_10140 PF00857 Isochorismatase family FY131_10145 PF00296 Luciferase-like monooxygenase FY131_10150 PF01126 Heme oxygenase FY131_10155 PF00701 Dihydrodipicolinate synthetase family FY131_10160 PF07729 FCD domain FY131_10160 PF00392 Bacterial regulatory proteins, gntR family FY131_10170 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10175 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10180 PF00005 ABC transporter FY131_10180 PF17912 MalK OB fold domain FY131_10180 PF03459 TOBE domain FY131_10185 PF00294 pfkB family carbohydrate kinase FY131_10190 PF03576 Peptidase family S58 FY131_10195 PF01063 Amino-transferase class IV FY131_10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_10200 PF03466 LysR substrate binding domain FY131_10210 PF00005 ABC transporter FY131_10210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_10215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_10215 PF00005 ABC transporter FY131_10220 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10220 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_10225 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_10235 PF01244 Membrane dipeptidase (Peptidase family M19) FY131_10245 PF09924 Uncharacterised conserved protein (DUF2156) FY131_10245 PF03706 Lysylphosphatidylglycerol synthase TM region FY131_10265 PF07690 Major Facilitator Superfamily FY131_10275 PF00775 Dioxygenase FY131_10275 PF04444 Catechol dioxygenase N terminus FY131_10280 PF00465 Iron-containing alcohol dehydrogenase FY131_10285 PF04909 Amidohydrolase FY131_10290 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY131_10290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_10295 PF01613 Flavin reductase like domain FY131_10310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_10310 PF00512 His Kinase A (phospho-acceptor) domain FY131_10315 PF00072 Response regulator receiver domain FY131_10315 PF00486 Transcriptional regulatory protein, C terminal FY131_10325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY131_10330 PF08402 TOBE domain FY131_10330 PF00005 ABC transporter FY131_10335 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10350 PF00486 Transcriptional regulatory protein, C terminal FY131_10350 PF00072 Response regulator receiver domain FY131_10355 PF13188 PAS domain FY131_10355 PF08448 PAS fold FY131_10355 PF00512 His Kinase A (phospho-acceptor) domain FY131_10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_10355 PF00072 Response regulator receiver domain FY131_10365 PF13614 AAA domain FY131_10370 PF00072 Response regulator receiver domain FY131_10370 PF01339 CheB methylesterase FY131_10375 PF03705 CheR methyltransferase, all-alpha domain FY131_10375 PF01739 CheR methyltransferase, SAM binding domain FY131_10380 PF01584 CheW-like domain FY131_10385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_10385 PF00672 HAMP domain FY131_10385 PF02203 Tar ligand binding domain homologue FY131_10390 PF01584 CheW-like domain FY131_10395 PF01627 Hpt domain FY131_10395 PF01584 CheW-like domain FY131_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_10395 PF02895 Signal transducing histidine kinase, homodimeric domain FY131_10395 PF09078 CheY binding FY131_10400 PF00072 Response regulator receiver domain FY131_10410 PF00072 Response regulator receiver domain FY131_10415 PF00296 Luciferase-like monooxygenase FY131_10420 PF01613 Flavin reductase like domain FY131_10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_10425 PF03466 LysR substrate binding domain FY131_10430 PF00355 Rieske [2Fe-2S] domain FY131_10435 PF00005 ABC transporter FY131_10440 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_10445 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10450 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10460 PF02913 FAD linked oxidases, C-terminal domain FY131_10460 PF01565 FAD binding domain FY131_10465 PF00155 Aminotransferase class I and II FY131_10470 PF00175 Oxidoreductase NAD-binding domain FY131_10470 PF00042 Globin FY131_10470 PF00970 Oxidoreductase FAD-binding domain FY131_10505 PF01259 SAICAR synthetase FY131_10515 PF00529 HlyD membrane-fusion protein of T1SS FY131_10515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY131_10520 PF00873 AcrB/AcrD/AcrF family FY131_10525 PF02321 Outer membrane efflux protein FY131_10530 PF09285 Elongation factor P, C-terminal FY131_10530 PF01132 Elongation factor P (EF-P) OB domain FY131_10530 PF08207 Elongation factor P (EF-P) KOW-like domain FY131_10535 PF00152 tRNA synthetases class II (D, K and N) FY131_10540 PF04055 Radical SAM superfamily FY131_10540 PF12544 Lysine-2,3-aminomutase FY131_10555 PF03466 LysR substrate binding domain FY131_10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_10560 PF01266 FAD dependent oxidoreductase FY131_10570 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10575 PF03459 TOBE domain FY131_10575 PF00005 ABC transporter FY131_10585 PF03576 Peptidase family S58 FY131_10590 PF05690 Thiazole biosynthesis protein ThiG FY131_10600 PF01266 FAD dependent oxidoreductase FY131_10605 PF01964 Radical SAM ThiC family FY131_10605 PF13667 ThiC-associated domain FY131_10610 PF00550 Phosphopantetheine attachment site FY131_10640 PF00005 ABC transporter FY131_10640 PF00664 ABC transporter transmembrane region FY131_10645 PF00027 Cyclic nucleotide-binding domain FY131_10645 PF13545 Crp-like helix-turn-helix domain FY131_10655 PF00211 Adenylate and Guanylate cyclase catalytic domain FY131_10655 PF00672 HAMP domain FY131_10665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY131_10665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY131_10665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY131_10670 PF13439 Glycosyltransferase Family 4 FY131_10670 PF00534 Glycosyl transferases group 1 FY131_10685 PF00005 ABC transporter FY131_10685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_10690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_10695 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10700 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10700 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_10710 PF00534 Glycosyl transferases group 1 FY131_10710 PF13439 Glycosyltransferase Family 4 FY131_10715 PF03033 Glycosyltransferase family 28 N-terminal domain FY131_10715 PF04101 Glycosyltransferase family 28 C-terminal domain FY131_10720 PF03932 CutC family FY131_10725 PF07690 Major Facilitator Superfamily FY131_10735 PF02838 Glycosyl hydrolase family 20, domain 2 FY131_10735 PF00728 Glycosyl hydrolase family 20, catalytic domain FY131_10745 PF01418 Helix-turn-helix domain, rpiR family FY131_10745 PF01380 SIS domain FY131_10755 PF00005 ABC transporter FY131_10755 PF17912 MalK OB fold domain FY131_10760 PF01547 Bacterial extracellular solute-binding protein FY131_10765 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10770 PF00528 Binding-protein-dependent transport system inner membrane component FY131_10780 PF00392 Bacterial regulatory proteins, gntR family FY131_10780 PF07702 UTRA domain FY131_10785 PF01380 SIS domain FY131_10790 PF01979 Amidohydrolase family FY131_10795 PF00480 ROK family FY131_10800 PF01494 FAD binding domain FY131_10805 PF01569 PAP2 superfamily FY131_10810 PF13288 DXP reductoisomerase C-terminal domain FY131_10810 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY131_10810 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY131_10815 PF00155 Aminotransferase class I and II FY131_10825 PF01103 Surface antigen FY131_10825 PF07244 Surface antigen variable number repeat FY131_10825 PF17243 POTRA domain TamA domain 1 FY131_10835 PF01584 CheW-like domain FY131_10840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_10840 PF08447 PAS fold FY131_10840 PF13426 PAS domain FY131_10845 PF02634 FdhD/NarQ family FY131_10850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY131_10855 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY131_10855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY131_10860 PF00231 ATP synthase FY131_10865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY131_10865 PF00306 ATP synthase alpha/beta chain, C terminal domain FY131_10865 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY131_10870 PF00213 ATP synthase delta (OSCP) subunit FY131_10880 PF17764 3′ DNA-binding domain (3′BD) FY131_10880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY131_10880 PF18074 Primosomal protein N C-terminal domain FY131_10880 PF00270 DEAD/DEAH box helicase FY131_10885 PF00589 Phage integrase family FY131_10885 PF02899 Phage integrase, N-terminal SAM-like domain FY131_10905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY131_10905 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_10910 PF01810 LysE type translocator FY131_10920 PF02817 e3 binding domain FY131_10920 PF00364 Biotin-requiring enzyme FY131_10920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY131_10925 PF16078 2-oxoglutarate dehydrogenase N-terminus FY131_10925 PF00676 Dehydrogenase E1 component FY131_10925 PF16870 2-oxoglutarate dehydrogenase C-terminal FY131_10925 PF02779 Transketolase, pyrimidine binding domain FY131_10930 PF00549 CoA-ligase FY131_10930 PF02629 CoA binding domain FY131_10935 PF00549 CoA-ligase FY131_10935 PF08442 ATP-grasp domain FY131_10940 PF00056 lactate/malate dehydrogenase, NAD binding domain FY131_10940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY131_10945 PF03969 AFG1-like ATPase FY131_10950 PF02974 Protease inhibitor Inh FY131_10955 PF13085 2Fe-2S iron-sulfur cluster binding domain FY131_10955 PF13237 4Fe-4S dicluster domain FY131_10960 PF02910 Fumarate reductase flavoprotein C-term FY131_10960 PF00890 FAD binding domain FY131_10970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY131_10995 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY131_10995 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY131_11000 PF00814 Glycoprotease family FY131_11005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY131_11005 PF03900 Porphobilinogen deaminase, C-terminal domain FY131_11030 PF00117 Glutamine amidotransferase class-I FY131_11040 PF02325 YGGT family FY131_11045 PF02594 Uncharacterised ACR, YggU family COG1872 FY131_11050 PF00719 Inorganic pyrophosphatase FY131_11060 PF00679 Elongation factor G C-terminus FY131_11060 PF00009 Elongation factor Tu GTP binding domain FY131_11060 PF03144 Elongation factor Tu domain 2 FY131_11065 PF01432 Peptidase family M3 FY131_11075 PF01047 MarR family FY131_11080 PF07690 Major Facilitator Superfamily FY131_11085 PF00764 Arginosuccinate synthase FY131_11090 PF00106 short chain dehydrogenase FY131_11095 PF01810 LysE type translocator FY131_11100 PF00005 ABC transporter FY131_11105 PF02653 Branched-chain amino acid transport system / permease component FY131_11115 PF04055 Radical SAM superfamily FY131_11130 PF01329 Pterin 4 alpha carbinolamine dehydratase FY131_11135 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY131_11140 PF02834 LigT like Phosphoesterase FY131_11145 PF13472 GDSL-like Lipase/Acylhydrolase family FY131_11150 PF00005 ABC transporter FY131_11160 PF01027 Inhibitor of apoptosis-promoting Bax1 FY131_11175 PF00330 Aconitase family (aconitate hydratase) FY131_11175 PF00694 Aconitase C-terminal domain FY131_11180 PF00005 ABC transporter FY131_11185 PF03379 CcmB protein FY131_11190 PF01578 Cytochrome C assembly protein FY131_11200 PF08534 Redoxin FY131_11205 PF00990 Diguanylate cyclase, GGDEF domain FY131_11210 PF10755 Protein of unknown function (DUF2585) FY131_11215 PF04279 Intracellular septation protein A FY131_11220 PF00448 SRP54-type protein, GTPase domain FY131_11220 PF02881 SRP54-type protein, helical bundle domain FY131_11225 PF00919 Uncharacterized protein family UPF0004 FY131_11225 PF04055 Radical SAM superfamily FY131_11230 PF01678 Diaminopimelate epimerase FY131_11235 PF12706 Beta-lactamase superfamily domain FY131_11240 PF00448 SRP54-type protein, GTPase domain FY131_11240 PF02881 SRP54-type protein, helical bundle domain FY131_11240 PF02978 Signal peptide binding domain FY131_11245 PF01817 Chorismate mutase type II FY131_11245 PF02153 Prephenate dehydrogenase FY131_11250 PF00886 Ribosomal protein S16 FY131_11255 PF01782 RimM N-terminal domain FY131_11255 PF05239 PRC-barrel domain FY131_11260 PF01746 tRNA (Guanine-1)-methyltransferase FY131_11270 PF01245 Ribosomal protein L19 FY131_11275 PF00664 ABC transporter transmembrane region FY131_11275 PF00005 ABC transporter FY131_11280 PF00529 HlyD membrane-fusion protein of T1SS FY131_11280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY131_11290 PF07690 Major Facilitator Superfamily FY131_11295 PF00330 Aconitase family (aconitate hydratase) FY131_11300 PF01435 Peptidase family M48 FY131_11305 PF00005 ABC transporter FY131_11310 PF00528 Binding-protein-dependent transport system inner membrane component FY131_11315 PF01547 Bacterial extracellular solute-binding protein FY131_11325 PF16326 ABC transporter C-terminal domain FY131_11325 PF00005 ABC transporter FY131_11335 PF04204 Homoserine O-succinyltransferase FY131_11340 PF01263 Aldose 1-epimerase FY131_11345 PF00912 Transglycosylase FY131_11350 PF00348 Polyprenyl synthetase FY131_11355 PF13488 Glycine zipper FY131_11355 PF00691 OmpA family FY131_11360 PF04551 GcpE protein FY131_11365 PF07690 Major Facilitator Superfamily FY131_11370 PF08220 DeoR-like helix-turn-helix domain FY131_11370 PF00455 DeoR C terminal sensor domain FY131_11375 PF02785 Biotin carboxylase C-terminal domain FY131_11375 PF02436 Conserved carboxylase domain FY131_11375 PF00682 HMGL-like FY131_11375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY131_11375 PF00364 Biotin-requiring enzyme FY131_11375 PF00289 Biotin carboxylase, N-terminal domain FY131_11380 PF00072 Response regulator receiver domain FY131_11380 PF00196 Bacterial regulatory proteins, luxR family FY131_11385 PF00664 ABC transporter transmembrane region FY131_11385 PF00005 ABC transporter FY131_11390 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY131_11390 PF06165 Glycosyltransferase family 36 FY131_11390 PF10091 Putative glucoamylase FY131_11395 PF07687 Peptidase dimerisation domain FY131_11395 PF01546 Peptidase family M20/M25/M40 FY131_11400 PF01266 FAD dependent oxidoreductase FY131_11405 PF00291 Pyridoxal-phosphate dependent enzyme FY131_11410 PF00920 Dehydratase family FY131_11415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY131_11415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY131_11420 PF01370 NAD dependent epimerase/dehydratase family FY131_11425 PF01565 FAD binding domain FY131_11425 PF02913 FAD linked oxidases, C-terminal domain FY131_11430 PF00392 Bacterial regulatory proteins, gntR family FY131_11430 PF07729 FCD domain FY131_11440 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY131_11445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_11450 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_11455 PF00501 AMP-binding enzyme FY131_11455 PF16177 Acetyl-coenzyme A synthetase N-terminus FY131_11455 PF13193 AMP-binding enzyme C-terminal domain FY131_11465 PF01168 Alanine racemase, N-terminal domain FY131_11470 PF08264 Anticodon-binding domain of tRNA FY131_11470 PF13603 Leucyl-tRNA synthetase, Domain 2 FY131_11470 PF00133 tRNA synthetases class I (I, L, M and V) FY131_11485 PF00037 4Fe-4S binding domain FY131_11485 PF11953 Domain of unknown function (DUF3470) FY131_11490 PF00579 tRNA synthetases class I (W and Y) FY131_11490 PF01479 S4 domain FY131_11500 PF01494 FAD binding domain FY131_11510 PF00543 Nitrogen regulatory protein P-II FY131_11515 PF00909 Ammonium Transporter Family FY131_11520 PF01580 FtsK/SpoIIIE family FY131_11520 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY131_11520 PF09397 Ftsk gamma domain FY131_11520 PF17854 FtsK alpha domain FY131_11525 PF03548 Outer membrane lipoprotein carrier protein LolA FY131_11540 PF00072 Response regulator receiver domain FY131_11540 PF00486 Transcriptional regulatory protein, C terminal FY131_11550 PF02559 CarD-like/TRCF domain FY131_11555 PF05088 Bacterial NAD-glutamate dehydrogenase FY131_11560 PF11700 Vacuole effluxer Atg22 like FY131_11565 PF05233 PHB accumulation regulatory domain FY131_11565 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY131_11570 PF00108 Thiolase, N-terminal domain FY131_11570 PF02803 Thiolase, C-terminal domain FY131_11585 PF00210 Ferritin-like domain FY131_11590 PF00293 NUDIX domain FY131_11600 PF13180 PDZ domain FY131_11600 PF03572 Peptidase family S41 FY131_11610 PF02590 Predicted SPOUT methyltransferase FY131_11620 PF01467 Cytidylyltransferase-like FY131_11625 PF00171 Aldehyde dehydrogenase family FY131_11630 PF00696 Amino acid kinase family FY131_11630 PF01472 PUA domain FY131_11635 PF01018 GTP1/OBG FY131_11635 PF01926 50S ribosome-binding GTPase FY131_11640 PF13302 Acetyltransferase (GNAT) domain FY131_11650 PF01016 Ribosomal L27 protein FY131_11655 PF00829 Ribosomal prokaryotic L21 protein FY131_11670 PF03328 HpcH/HpaI aldolase/citrate lyase family FY131_11680 PF00694 Aconitase C-terminal domain FY131_11685 PF00180 Isocitrate/isopropylmalate dehydrogenase FY131_11690 PF03150 Di-haem cytochrome c peroxidase FY131_11695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY131_11695 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY131_11700 PF10414 Sirohaem synthase dimerisation region FY131_11700 PF14824 Sirohaem biosynthesis protein central FY131_11700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_11705 PF01888 CbiD FY131_11710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_11720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_11725 PF02571 Precorrin-6x reductase CbiJ/CobK FY131_11730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_11735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_11740 PF02570 Precorrin-8X methylmutase FY131_11745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY131_11750 PF02514 CobN/Magnesium Chelatase FY131_11755 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY131_11755 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY131_11765 PF12557 Cob(I)alamin adenosyltransferase N terminal FY131_11765 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY131_11770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY131_11770 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY131_11775 PF03186 CobD/Cbib protein FY131_11780 PF00155 Aminotransferase class I and II FY131_11785 PF13378 Enolase C-terminal domain-like FY131_11785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_11790 PF05336 L-rhamnose mutarotase FY131_11795 PF08125 Mannitol dehydrogenase C-terminal domain FY131_11795 PF01232 Mannitol dehydrogenase Rossmann domain FY131_11800 PF08240 Alcohol dehydrogenase GroES-like domain FY131_11800 PF00107 Zinc-binding dehydrogenase FY131_11810 PF00248 Aldo/keto reductase family FY131_11820 PF02653 Branched-chain amino acid transport system / permease component FY131_11825 PF00005 ABC transporter FY131_11830 PF07729 FCD domain FY131_11830 PF00392 Bacterial regulatory proteins, gntR family FY131_11835 PF08666 SAF domain FY131_11835 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY131_11840 PF01808 AICARFT/IMPCHase bienzyme FY131_11840 PF02142 MGS-like domain FY131_11850 PF01189 16S rRNA methyltransferase RsmB/F FY131_11850 PF01029 NusB family FY131_11855 PF01435 Peptidase family M48 FY131_11865 PF17762 HTH domain found in ParB protein FY131_11865 PF02195 ParB-like nuclease domain FY131_11870 PF13614 AAA domain FY131_11875 PF02527 rRNA small subunit methyltransferase G FY131_11880 PF01134 Glucose inhibited division protein A FY131_11880 PF13932 GidA associated domain FY131_11885 PF01926 50S ribosome-binding GTPase FY131_11885 PF10396 GTP-binding protein TrmE N-terminus FY131_11885 PF12631 MnmE helical domain FY131_11890 PF07497 Rho termination factor, RNA-binding domain FY131_11890 PF07498 Rho termination factor, N-terminal domain FY131_11890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY131_11895 PF03653 Uncharacterised protein family (UPF0093) FY131_11900 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY131_11905 PF03618 Kinase/pyrophosphorylase FY131_11910 PF02545 Maf-like protein FY131_11915 PF01488 Shikimate / quinate 5-dehydrogenase FY131_11915 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY131_11915 PF08501 Shikimate dehydrogenase substrate binding domain FY131_11920 PF01121 Dephospho-CoA kinase FY131_11925 PF00929 Exonuclease FY131_11930 PF02556 Preprotein translocase subunit SecB FY131_11935 PF04186 FxsA cytoplasmic membrane protein FY131_11945 PF06725 3D domain FY131_11945 PF03562 MltA specific insert domain FY131_11960 PF00986 DNA gyrase B subunit, carboxyl terminus FY131_11960 PF01751 Toprim domain FY131_11960 PF00204 DNA gyrase B FY131_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_11970 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY131_11985 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY131_11990 PF00291 Pyridoxal-phosphate dependent enzyme FY131_11995 PF00290 Tryptophan synthase alpha chain FY131_12000 PF01039 Carboxyl transferase domain FY131_12005 PF02875 Mur ligase family, glutamate ligase domain FY131_12005 PF08245 Mur ligase middle domain FY131_12010 PF00085 Thioredoxin FY131_12015 PF12705 PD-(D/E)XK nuclease superfamily FY131_12015 PF00580 UvrD/REP helicase N-terminal domain FY131_12015 PF13361 UvrD-like helicase C-terminal domain FY131_12025 PF12804 MobA-like NTP transferase domain FY131_12030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY131_12035 PF00512 His Kinase A (phospho-acceptor) domain FY131_12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_12040 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY131_12040 PF05221 S-adenosyl-L-homocysteine hydrolase FY131_12045 PF00381 PTS HPr component phosphorylation site FY131_12050 PF03610 PTS system fructose IIA component FY131_12050 PF03830 PTS system sorbose subfamily IIB component FY131_12055 PF07475 HPr Serine kinase C-terminal domain FY131_12055 PF02603 HPr Serine kinase N terminus FY131_12060 PF13756 Stimulus-sensing domain FY131_12060 PF00672 HAMP domain FY131_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_12060 PF00512 His Kinase A (phospho-acceptor) domain FY131_12060 PF13755 Sensor N-terminal transmembrane domain FY131_12065 PF00486 Transcriptional regulatory protein, C terminal FY131_12065 PF00072 Response regulator receiver domain FY131_12070 PF01293 Phosphoenolpyruvate carboxykinase FY131_12075 PF00472 RF-1 domain FY131_12080 PF04972 BON domain FY131_12080 PF01476 LysM domain FY131_12085 PF00485 Phosphoribulokinase / Uridine kinase family FY131_12090 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY131_12095 PF00977 Histidine biosynthesis protein FY131_12100 PF00977 Histidine biosynthesis protein FY131_12105 PF00117 Glutamine amidotransferase class-I FY131_12115 PF00475 Imidazoleglycerol-phosphate dehydratase FY131_12120 PF00227 Proteasome subunit FY131_12125 PF00004 ATPase family associated with various cellular activities (AAA) FY131_12125 PF07724 AAA domain (Cdc48 subfamily) FY131_12125 PF10431 C-terminal, D2-small domain, of ClpB protein FY131_12135 PF01274 Malate synthase FY131_12150 PF00072 Response regulator receiver domain FY131_12155 PF00512 His Kinase A (phospho-acceptor) domain FY131_12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_12160 PF04408 Helicase associated domain (HA2) FY131_12160 PF00270 DEAD/DEAH box helicase FY131_12160 PF08482 ATP-dependent helicase C-terminal FY131_12160 PF00271 Helicase conserved C-terminal domain FY131_12195 PF00570 HRDC domain FY131_12195 PF00270 DEAD/DEAH box helicase FY131_12195 PF00271 Helicase conserved C-terminal domain FY131_12195 PF09382 RQC domain FY131_12195 PF16124 RecQ zinc-binding FY131_12200 PF00480 ROK family FY131_12205 PF13407 Periplasmic binding protein domain FY131_12210 PF02653 Branched-chain amino acid transport system / permease component FY131_12215 PF00005 ABC transporter FY131_12220 PF00485 Phosphoribulokinase / Uridine kinase family FY131_12225 PF00462 Glutaredoxin FY131_12230 PF07972 NrdI Flavodoxin like FY131_12235 PF08343 Ribonucleotide reductase N-terminal FY131_12235 PF02867 Ribonucleotide reductase, barrel domain FY131_12235 PF00317 Ribonucleotide reductase, all-alpha domain FY131_12240 PF00268 Ribonucleotide reductase, small chain FY131_12250 PF02463 RecF/RecN/SMC N terminal domain FY131_12255 PF00581 Rhodanese-like domain FY131_12255 PF00899 ThiF family FY131_12265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_12265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY131_12275 PF00294 pfkB family carbohydrate kinase FY131_12285 PF05175 Methyltransferase small domain FY131_12285 PF08468 Methyltransferase small domain N-terminal FY131_12290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY131_12290 PF03725 3' exoribonuclease family, domain 2 FY131_12290 PF01138 3' exoribonuclease family, domain 1 FY131_12290 PF00575 S1 RNA binding domain FY131_12290 PF00013 KH domain FY131_12295 PF00312 Ribosomal protein S15 FY131_12300 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY131_12300 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY131_12300 PF09157 Pseudouridine synthase II TruB, C-terminal FY131_12305 PF02033 Ribosome-binding factor A FY131_12310 PF08364 Bacterial translation initiation factor IF-2 associated region FY131_12310 PF04760 Translation initiation factor IF-2, N-terminal region FY131_12310 PF03144 Elongation factor Tu domain 2 FY131_12310 PF00009 Elongation factor Tu GTP binding domain FY131_12310 PF11987 Translation-initiation factor 2 FY131_12320 PF08529 NusA N-terminal domain FY131_12320 PF00575 S1 RNA binding domain FY131_12320 PF13184 NusA-like KH domain FY131_12325 PF02576 RimP N-terminal domain FY131_12325 PF17384 RimP C-terminal SH3 domain FY131_12330 PF05977 Transmembrane secretion effector FY131_12335 PF13406 Transglycosylase SLT domain FY131_12340 PF02132 RecR protein FY131_12340 PF13662 Toprim domain FY131_12350 PF02575 YbaB/EbfC DNA-binding family FY131_12355 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY131_12355 PF12170 DNA polymerase III tau subunit V interacting with alpha FY131_12355 PF12169 DNA polymerase III subunits gamma and tau domain III FY131_12370 PF09297 NADH pyrophosphatase zinc ribbon domain FY131_12370 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY131_12370 PF00293 NUDIX domain FY131_12375 PF00800 Prephenate dehydratase FY131_12375 PF01817 Chorismate mutase type II FY131_12380 PF02348 Cytidylyltransferase FY131_12385 PF00034 Cytochrome c FY131_12390 PF02397 Bacterial sugar transferase FY131_12395 PF00905 Penicillin binding protein transpeptidase domain FY131_12395 PF00912 Transglycosylase FY131_12400 PF04073 Aminoacyl-tRNA editing domain FY131_12405 PF00313 'Cold-shock' DNA-binding domain FY131_12410 PF01546 Peptidase family M20/M25/M40 FY131_12410 PF07687 Peptidase dimerisation domain FY131_12415 PF01047 MarR family FY131_12420 PF00476 DNA polymerase family A FY131_12420 PF01612 3'-5' exonuclease FY131_12420 PF01367 5'-3' exonuclease, C-terminal SAM fold FY131_12420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY131_12430 PF01783 Ribosomal L32p protein family FY131_12435 PF02743 Cache domain FY131_12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_12435 PF00512 His Kinase A (phospho-acceptor) domain FY131_12440 PF00158 Sigma-54 interaction domain FY131_12440 PF02954 Bacterial regulatory protein, Fis family FY131_12440 PF00072 Response regulator receiver domain FY131_12445 PF03401 Tripartite tricarboxylate transporter family receptor FY131_12450 PF07331 Tripartite tricarboxylate transporter TctB family FY131_12455 PF01970 Tripartite tricarboxylate transporter TctA family FY131_12460 PF04102 SlyX FY131_12470 PF00226 DnaJ domain FY131_12470 PF01556 DnaJ C terminal domain FY131_12470 PF00684 DnaJ central domain FY131_12475 PF00012 Hsp70 protein FY131_12490 PF01625 Peptide methionine sulfoxide reductase FY131_12495 PF02608 ABC transporter substrate-binding protein PnrA-like FY131_12500 PF00005 ABC transporter FY131_12505 PF02653 Branched-chain amino acid transport system / permease component FY131_12510 PF02653 Branched-chain amino acid transport system / permease component FY131_12515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY131_12520 PF01048 Phosphorylase superfamily FY131_12525 PF01791 DeoC/LacD family aldolase FY131_12530 PF02885 Glycosyl transferase family, helical bundle domain FY131_12530 PF00591 Glycosyl transferase family, a/b domain FY131_12530 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY131_12545 PF00962 Adenosine/AMP deaminase FY131_12550 PF01676 Metalloenzyme superfamily FY131_12565 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY131_12570 PF00510 Cytochrome c oxidase subunit III FY131_12575 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY131_12580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY131_12580 PF06481 COX Aromatic Rich Motif FY131_12585 PF07690 Major Facilitator Superfamily FY131_12585 PF00083 Sugar (and other) transporter FY131_12595 PF01645 Conserved region in glutamate synthase FY131_12595 PF01493 GXGXG motif FY131_12595 PF00310 Glutamine amidotransferases class-II FY131_12595 PF04898 Glutamate synthase central domain FY131_12600 PF00667 FAD binding domain FY131_12600 PF00175 Oxidoreductase NAD-binding domain FY131_12600 PF00258 Flavodoxin FY131_12620 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_12620 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_12625 PF07977 FabA-like domain FY131_12645 PF03458 UPF0126 domain FY131_12655 PF06912 Protein of unknown function (DUF1275) FY131_12665 PF00528 Binding-protein-dependent transport system inner membrane component FY131_12670 PF00005 ABC transporter FY131_12675 PF00392 Bacterial regulatory proteins, gntR family FY131_12675 PF07702 UTRA domain FY131_12680 PF01618 MotA/TolQ/ExbB proton channel family FY131_12685 PF02472 Biopolymer transport protein ExbD/TolR FY131_12695 PF02615 Malate/L-lactate dehydrogenase FY131_12710 PF00625 Guanylate kinase FY131_12715 PF07969 Amidohydrolase family FY131_12720 PF06299 Protein of unknown function (DUF1045) FY131_12725 PF00528 Binding-protein-dependent transport system inner membrane component FY131_12730 PF00528 Binding-protein-dependent transport system inner membrane component FY131_12740 PF00005 ABC transporter FY131_12750 PF00005 ABC transporter FY131_12755 PF00005 ABC transporter FY131_12760 PF06007 Phosphonate metabolism protein PhnJ FY131_12765 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY131_12770 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY131_12775 PF06754 Phosphonate metabolism protein PhnG FY131_12780 PF00392 Bacterial regulatory proteins, gntR family FY131_12780 PF07702 UTRA domain FY131_12785 PF01113 Dihydrodipicolinate reductase, N-terminus FY131_12785 PF05173 Dihydrodipicolinate reductase, C-terminus FY131_12790 PF02685 Glucokinase FY131_12795 PF02142 MGS-like domain FY131_12800 PF03411 Penicillin-insensitive murein endopeptidase FY131_12805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_12810 PF00528 Binding-protein-dependent transport system inner membrane component FY131_12815 PF00528 Binding-protein-dependent transport system inner membrane component FY131_12815 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_12820 PF00005 ABC transporter FY131_12820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_12825 PF01266 FAD dependent oxidoreductase FY131_12830 PF00120 Glutamine synthetase, catalytic domain FY131_12835 PF01266 FAD dependent oxidoreductase FY131_12845 PF00528 Binding-protein-dependent transport system inner membrane component FY131_12850 PF00005 ABC transporter FY131_12855 PF00528 Binding-protein-dependent transport system inner membrane component FY131_12860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY131_12870 PF02082 Transcriptional regulator FY131_12875 PF13416 Bacterial extracellular solute-binding protein FY131_12880 PF00171 Aldehyde dehydrogenase family FY131_12890 PF03466 LysR substrate binding domain FY131_12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_12895 PF00892 EamA-like transporter family FY131_12910 PF00877 NlpC/P60 family FY131_12920 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY131_12920 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY131_12925 PF00883 Cytosol aminopeptidase family, catalytic domain FY131_12925 PF02789 Cytosol aminopeptidase family, N-terminal domain FY131_12945 PF00437 Type II/IV secretion system protein FY131_12960 PF13629 Pilus formation protein N terminal region FY131_12960 PF00263 Bacterial type II and III secretion system protein FY131_12960 PF04972 BON domain FY131_13000 PF00117 Glutamine amidotransferase class-I FY131_13005 PF07411 Domain of unknown function (DUF1508) FY131_13010 PF01183 Glycosyl hydrolases family 25 FY131_13015 PF00892 EamA-like transporter family FY131_13020 PF00392 Bacterial regulatory proteins, gntR family FY131_13020 PF00155 Aminotransferase class I and II FY131_13050 PF00679 Elongation factor G C-terminus FY131_13050 PF06421 GTP-binding protein LepA C-terminus FY131_13050 PF03144 Elongation factor Tu domain 2 FY131_13050 PF00009 Elongation factor Tu GTP binding domain FY131_13055 PF00795 Carbon-nitrogen hydrolase FY131_13085 PF12833 Helix-turn-helix domain FY131_13085 PF02311 AraC-like ligand binding domain FY131_13090 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_13115 PF05198 Translation initiation factor IF-3, N-terminal domain FY131_13115 PF00707 Translation initiation factor IF-3, C-terminal domain FY131_13120 PF01632 Ribosomal protein L35 FY131_13125 PF00453 Ribosomal protein L20 FY131_13135 PF01409 tRNA synthetases class II core domain (F) FY131_13135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY131_13140 PF01588 Putative tRNA binding domain FY131_13140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY131_13140 PF03484 tRNA synthetase B5 domain FY131_13140 PF03483 B3/4 domain FY131_13140 PF03147 Ferredoxin-fold anticodon binding domain FY131_13145 PF00248 Aldo/keto reductase family FY131_13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_13150 PF03466 LysR substrate binding domain FY131_13160 PF00248 Aldo/keto reductase family FY131_13165 PF01965 DJ-1/PfpI family FY131_13165 PF12833 Helix-turn-helix domain FY131_13175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_13175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_13190 PF02601 Exonuclease VII, large subunit FY131_13190 PF13742 OB-fold nucleic acid binding domain FY131_13195 PF13378 Enolase C-terminal domain-like FY131_13195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_13200 PF07729 FCD domain FY131_13200 PF00392 Bacterial regulatory proteins, gntR family FY131_13205 PF01047 MarR family FY131_13210 PF00892 EamA-like transporter family FY131_13215 PF02073 Thermophilic metalloprotease (M29) FY131_13220 PF04073 Aminoacyl-tRNA editing domain FY131_13225 PF03960 ArsC family FY131_13235 PF00117 Glutamine amidotransferase class-I FY131_13235 PF00958 GMP synthase C terminal domain FY131_13250 PF03073 TspO/MBR family FY131_13275 PF01029 NusB family FY131_13275 PF01189 16S rRNA methyltransferase RsmB/F FY131_13280 PF03330 Lytic transglycolase FY131_13290 PF08331 Domain of unknown function (DUF1730) FY131_13295 PF00043 Glutathione S-transferase, C-terminal domain FY131_13295 PF13417 Glutathione S-transferase, N-terminal domain FY131_13300 PF02673 Bacitracin resistance protein BacA FY131_13315 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY131_13325 PF13649 Methyltransferase domain FY131_13330 PF02767 DNA polymerase III beta subunit, central domain FY131_13330 PF02768 DNA polymerase III beta subunit, C-terminal domain FY131_13330 PF00712 DNA polymerase III beta subunit, N-terminal domain FY131_13335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_13340 PF02021 Uncharacterised protein family UPF0102 FY131_13345 PF14602 Hexapeptide repeat of succinyl-transferase FY131_13345 PF12464 Maltose acetyltransferase FY131_13350 PF13416 Bacterial extracellular solute-binding protein FY131_13355 PF00528 Binding-protein-dependent transport system inner membrane component FY131_13360 PF00528 Binding-protein-dependent transport system inner membrane component FY131_13365 PF00005 ABC transporter FY131_13375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY131_13375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY131_13380 PF01078 Magnesium chelatase, subunit ChlI FY131_13380 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY131_13385 PF00291 Pyridoxal-phosphate dependent enzyme FY131_13390 PF01810 LysE type translocator FY131_13395 PF00692 dUTPase FY131_13400 PF16658 Class II release factor RF3, C-terminal domain FY131_13400 PF00009 Elongation factor Tu GTP binding domain FY131_13400 PF03144 Elongation factor Tu domain 2 FY131_13405 PF04127 DNA / pantothenate metabolism flavoprotein FY131_13405 PF02441 Flavoprotein FY131_13420 PF03109 ABC1 family FY131_13425 PF01209 ubiE/COQ5 methyltransferase family FY131_13430 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY131_13430 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY131_13430 PF06827 Zinc finger found in FPG and IleRS FY131_13435 PF00378 Enoyl-CoA hydratase/isomerase FY131_13440 PF01649 Ribosomal protein S20 FY131_13480 PF00300 Histidine phosphatase superfamily (branch 1) FY131_13490 PF13505 Outer membrane protein beta-barrel domain FY131_13555 PF00534 Glycosyl transferases group 1 FY131_13555 PF08323 Starch synthase catalytic domain FY131_13560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY131_13560 PF00128 Alpha amylase, catalytic domain FY131_13560 PF11941 Domain of unknown function (DUF3459) FY131_13565 PF04542 Sigma-70 region 2 FY131_13565 PF08281 Sigma-70, region 4 FY131_13595 PF05974 Domain of unknown function (DUF892) FY131_13600 PF00199 Catalase FY131_13600 PF06628 Catalase-related immune-responsive FY131_13600 PF18011 C-terminal domain found in long catalases FY131_13615 PF01566 Natural resistance-associated macrophage protein FY131_13615 PF03358 NADPH-dependent FMN reductase FY131_13630 PF13005 zinc-finger binding domain of transposase IS66 FY131_13630 PF03050 Transposase IS66 family FY131_13630 PF13817 IS66 C-terminal element FY131_13630 PF13007 Transposase C of IS166 homeodomain FY131_13650 PF00072 Response regulator receiver domain FY131_13650 PF00196 Bacterial regulatory proteins, luxR family FY131_13655 PF07730 Histidine kinase FY131_13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_13655 PF05384 Sensor protein DegS FY131_13665 PF00664 ABC transporter transmembrane region FY131_13665 PF00005 ABC transporter FY131_13675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY131_13675 PF00529 HlyD membrane-fusion protein of T1SS FY131_13700 PF05717 IS66 Orf2 like protein FY131_13750 PF02534 Type IV secretory system Conjugative DNA transfer FY131_13765 PF03389 MobA/MobL family FY131_13765 PF01443 Viral (Superfamily 1) RNA helicase FY131_13765 PF17841 BID domain of Bartonella effector protein (Bep) FY131_13845 PF06715 Gp5 C-terminal repeat (3 copies) FY131_13845 PF04717 Type VI secretion system, phage-baseplate injector FY131_13860 PF00004 ATPase family associated with various cellular activities (AAA) FY131_13860 PF17871 AAA lid domain FY131_13860 PF10431 C-terminal, D2-small domain, of ClpB protein FY131_13860 PF07724 AAA domain (Cdc48 subfamily) FY131_13870 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY131_13875 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY131_13895 PF05947 Type VI secretion system, TssF FY131_13910 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY131_13915 PF00691 OmpA family FY131_13920 PF06761 Intracellular multiplication and human macrophage-killing FY131_13920 PF06744 Type VI secretion protein IcmF C-terminal FY131_13920 PF14331 ImcF-related N-terminal domain FY131_13935 PF02563 Polysaccharide biosynthesis/export protein FY131_13955 PF01037 Lrp/AsnC ligand binding domain FY131_13960 PF00171 Aldehyde dehydrogenase family FY131_13965 PF00202 Aminotransferase class-III FY131_13970 PF00392 Bacterial regulatory proteins, gntR family FY131_13970 PF00155 Aminotransferase class I and II FY131_13975 PF00291 Pyridoxal-phosphate dependent enzyme FY131_13980 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY131_13985 PF01321 Creatinase/Prolidase N-terminal domain FY131_13985 PF00557 Metallopeptidase family M24 FY131_13990 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FY131_13995 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_14000 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14005 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14010 PF00005 ABC transporter FY131_14030 PF00440 Bacterial regulatory proteins, tetR family FY131_14045 PF04542 Sigma-70 region 2 FY131_14045 PF08281 Sigma-70, region 4 FY131_14055 PF07929 Plasmid pRiA4b ORF-3-like protein FY131_14060 PF13817 IS66 C-terminal element FY131_14060 PF03050 Transposase IS66 family FY131_14060 PF13005 zinc-finger binding domain of transposase IS66 FY131_14060 PF13007 Transposase C of IS166 homeodomain FY131_14065 PF05717 IS66 Orf2 like protein FY131_14085 PF00009 Elongation factor Tu GTP binding domain FY131_14090 PF01507 Phosphoadenosine phosphosulfate reductase family FY131_14100 PF14307 Glycosyltransferase WbsX FY131_14100 PF05045 Rhamnan synthesis protein F FY131_14110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY131_14110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY131_14110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY131_14130 PF13817 IS66 C-terminal element FY131_14130 PF13007 Transposase C of IS166 homeodomain FY131_14130 PF13005 zinc-finger binding domain of transposase IS66 FY131_14130 PF03050 Transposase IS66 family FY131_14155 PF00005 ABC transporter FY131_14175 PF00535 Glycosyl transferase family 2 FY131_14180 PF05159 Capsule polysaccharide biosynthesis protein FY131_14185 PF00884 Sulfatase FY131_14190 PF00106 short chain dehydrogenase FY131_14195 PF00155 Aminotransferase class I and II FY131_14200 PF00698 Acyl transferase domain FY131_14200 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_14200 PF16197 Ketoacyl-synthetase C-terminal extension FY131_14200 PF00550 Phosphopantetheine attachment site FY131_14200 PF14765 Polyketide synthase dehydratase FY131_14200 PF08240 Alcohol dehydrogenase GroES-like domain FY131_14200 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_14200 PF08659 KR domain FY131_14215 PF00285 Citrate synthase, C-terminal domain FY131_14220 PF00285 Citrate synthase, C-terminal domain FY131_14255 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FY131_14260 PF13302 Acetyltransferase (GNAT) domain FY131_14285 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_14285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY131_14340 PF18011 C-terminal domain found in long catalases FY131_14340 PF06628 Catalase-related immune-responsive FY131_14340 PF00199 Catalase FY131_14350 PF12792 CSS motif domain associated with EAL FY131_14350 PF00563 EAL domain FY131_14365 PF00664 ABC transporter transmembrane region FY131_14365 PF00005 ABC transporter FY131_14375 PF03401 Tripartite tricarboxylate transporter family receptor FY131_14380 PF00196 Bacterial regulatory proteins, luxR family FY131_14380 PF00072 Response regulator receiver domain FY131_14385 PF05532 CsbD-like FY131_14405 PF00486 Transcriptional regulatory protein, C terminal FY131_14405 PF00072 Response regulator receiver domain FY131_14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_14415 PF13673 Acetyltransferase (GNAT) domain FY131_14420 PF07690 Major Facilitator Superfamily FY131_14430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY131_14430 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY131_14430 PF01568 Molydopterin dinucleotide binding domain FY131_14430 PF00384 Molybdopterin oxidoreductase FY131_14430 PF00037 4Fe-4S binding domain FY131_14435 PF00037 4Fe-4S binding domain FY131_14435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY131_14435 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY131_14445 PF03466 LysR substrate binding domain FY131_14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_14450 PF01177 Asp/Glu/Hydantoin racemase FY131_14455 PF01613 Flavin reductase like domain FY131_14460 PF00392 Bacterial regulatory proteins, gntR family FY131_14460 PF07729 FCD domain FY131_14465 PF00005 ABC transporter FY131_14465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_14470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_14470 PF00005 ABC transporter FY131_14475 PF01979 Amidohydrolase family FY131_14480 PF01979 Amidohydrolase family FY131_14485 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14485 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_14490 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_14500 PF01979 Amidohydrolase family FY131_14505 PF02530 Porin subfamily FY131_14510 PF00563 EAL domain FY131_14510 PF03707 Bacterial signalling protein N terminal repeat FY131_14510 PF00990 Diguanylate cyclase, GGDEF domain FY131_14515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY131_14515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_14520 PF00005 ABC transporter FY131_14525 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14530 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14535 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_14545 PF00356 Bacterial regulatory proteins, lacI family FY131_14550 PF05544 Proline racemase FY131_14560 PF01266 FAD dependent oxidoreductase FY131_14565 PF00005 ABC transporter FY131_14570 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14575 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14585 PF02615 Malate/L-lactate dehydrogenase FY131_14590 PF00701 Dihydrodipicolinate synthetase family FY131_14595 PF00392 Bacterial regulatory proteins, gntR family FY131_14595 PF07729 FCD domain FY131_14600 PF00091 Tubulin/FtsZ family, GTPase domain FY131_14600 PF12327 FtsZ family, C-terminal domain FY131_14605 PF00072 Response regulator receiver domain FY131_14625 PF00005 ABC transporter FY131_14630 PF13533 Biotin-lipoyl like FY131_14635 PF02056 Family 4 glycosyl hydrolase FY131_14635 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY131_14640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_14640 PF00005 ABC transporter FY131_14645 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_14645 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14650 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_14660 PF02056 Family 4 glycosyl hydrolase FY131_14660 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY131_14685 PF00480 ROK family FY131_14690 PF13416 Bacterial extracellular solute-binding protein FY131_14695 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14700 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14705 PF14698 Argininosuccinate lyase C-terminal FY131_14705 PF00206 Lyase FY131_14710 PF00005 ABC transporter FY131_14710 PF08402 TOBE domain FY131_14715 PF00294 pfkB family carbohydrate kinase FY131_14720 PF12411 Choline sulfatase enzyme C terminal FY131_14720 PF00884 Sulfatase FY131_14725 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY131_14730 PF03466 LysR substrate binding domain FY131_14730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_14735 PF00171 Aldehyde dehydrogenase family FY131_14745 PF02311 AraC-like ligand binding domain FY131_14745 PF12833 Helix-turn-helix domain FY131_14760 PF01638 HxlR-like helix-turn-helix FY131_14765 PF00005 ABC transporter FY131_14770 PF01032 FecCD transport family FY131_14775 PF01032 FecCD transport family FY131_14785 PF07715 TonB-dependent Receptor Plug Domain FY131_14785 PF00593 TonB dependent receptor FY131_14790 PF12833 Helix-turn-helix domain FY131_14795 PF00141 Peroxidase FY131_14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_14800 PF03466 LysR substrate binding domain FY131_14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_14810 PF00512 His Kinase A (phospho-acceptor) domain FY131_14810 PF00672 HAMP domain FY131_14815 PF00072 Response regulator receiver domain FY131_14815 PF00486 Transcriptional regulatory protein, C terminal FY131_14820 PF13533 Biotin-lipoyl like FY131_14825 PF00873 AcrB/AcrD/AcrF family FY131_14835 PF17843 MycE methyltransferase N-terminal FY131_14845 PF01865 Protein of unknown function DUF47 FY131_14850 PF01384 Phosphate transporter family FY131_14855 PF02735 Ku70/Ku80 beta-barrel domain FY131_14860 PF01068 ATP dependent DNA ligase domain FY131_14860 PF13298 DNA polymerase Ligase (LigD) FY131_14860 PF04679 ATP dependent DNA ligase C terminal region FY131_14865 PF02735 Ku70/Ku80 beta-barrel domain FY131_14880 PF13188 PAS domain FY131_14880 PF03707 Bacterial signalling protein N terminal repeat FY131_14880 PF00563 EAL domain FY131_14880 PF00990 Diguanylate cyclase, GGDEF domain FY131_14890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_14895 PF03786 D-mannonate dehydratase (UxuA) FY131_14900 PF00392 Bacterial regulatory proteins, gntR family FY131_14900 PF07729 FCD domain FY131_14905 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14910 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14910 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_14915 PF00005 ABC transporter FY131_14915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_14920 PF00005 ABC transporter FY131_14920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_14925 PF03459 TOBE domain FY131_14925 PF17912 MalK OB fold domain FY131_14925 PF00005 ABC transporter FY131_14930 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14935 PF00528 Binding-protein-dependent transport system inner membrane component FY131_14945 PF01593 Flavin containing amine oxidoreductase FY131_14950 PF00356 Bacterial regulatory proteins, lacI family FY131_14960 PF00580 UvrD/REP helicase N-terminal domain FY131_14960 PF13361 UvrD-like helicase C-terminal domain FY131_14965 PF00817 impB/mucB/samB family FY131_14965 PF11799 impB/mucB/samB family C-terminal domain FY131_14970 PF07715 TonB-dependent Receptor Plug Domain FY131_14975 PF00005 ABC transporter FY131_14980 PF01032 FecCD transport family FY131_14985 PF01032 FecCD transport family FY131_14990 PF01497 Periplasmic binding protein FY131_15000 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY131_15005 PF16363 GDP-mannose 4,6 dehydratase FY131_15010 PF04321 RmlD substrate binding domain FY131_15015 PF00483 Nucleotidyl transferase FY131_15025 PF01370 NAD dependent epimerase/dehydratase family FY131_15030 PF08241 Methyltransferase domain FY131_15035 PF08241 Methyltransferase domain FY131_15045 PF00664 ABC transporter transmembrane region FY131_15045 PF00005 ABC transporter FY131_15050 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY131_15060 PF01758 Sodium Bile acid symporter family FY131_15080 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15085 PF00005 ABC transporter FY131_15085 PF08402 TOBE domain FY131_15090 PF01547 Bacterial extracellular solute-binding protein FY131_15095 PF00480 ROK family FY131_15100 PF00459 Inositol monophosphatase family FY131_15105 PF03009 Glycerophosphoryl diester phosphodiesterase family FY131_15110 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15115 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15120 PF17912 MalK OB fold domain FY131_15120 PF00005 ABC transporter FY131_15130 PF00480 ROK family FY131_15150 PF07470 Glycosyl Hydrolase Family 88 FY131_15160 PF00005 ABC transporter FY131_15160 PF17912 MalK OB fold domain FY131_15165 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15170 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15175 PF00356 Bacterial regulatory proteins, lacI family FY131_15185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_15185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_15190 PF01261 Xylose isomerase-like TIM barrel FY131_15195 PF13407 Periplasmic binding protein domain FY131_15200 PF00356 Bacterial regulatory proteins, lacI family FY131_15205 PF00108 Thiolase, N-terminal domain FY131_15205 PF02803 Thiolase, C-terminal domain FY131_15210 PF01144 Coenzyme A transferase FY131_15215 PF01144 Coenzyme A transferase FY131_15220 PF09339 IclR helix-turn-helix domain FY131_15220 PF01614 Bacterial transcriptional regulator FY131_15230 PF01494 FAD binding domain FY131_15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_15235 PF03466 LysR substrate binding domain FY131_15245 PF02627 Carboxymuconolactone decarboxylase family FY131_15250 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY131_15250 PF00775 Dioxygenase FY131_15255 PF00775 Dioxygenase FY131_15260 PF10397 Adenylosuccinate lyase C-terminus FY131_15260 PF00206 Lyase FY131_15265 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15270 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15275 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_15280 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_15285 PF00005 ABC transporter FY131_15290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY131_15290 PF08501 Shikimate dehydrogenase substrate binding domain FY131_15295 PF01220 Dehydroquinase class II FY131_15305 PF01261 Xylose isomerase-like TIM barrel FY131_15305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_15315 PF00005 ABC transporter FY131_15315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_15320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_15325 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15330 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_15330 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15345 PF13458 Periplasmic binding protein FY131_15360 PF00005 ABC transporter FY131_15360 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY131_15365 PF00005 ABC transporter FY131_15375 PF00294 pfkB family carbohydrate kinase FY131_15380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY131_15380 PF00205 Thiamine pyrophosphate enzyme, central domain FY131_15380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY131_15385 PF01261 Xylose isomerase-like TIM barrel FY131_15390 PF04962 KduI/IolB family FY131_15395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_15395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_15400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY131_15400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_15405 PF00356 Bacterial regulatory proteins, lacI family FY131_15410 PF01047 MarR family FY131_15415 PF02633 Creatinine amidohydrolase FY131_15420 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY131_15420 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY131_15435 PF13505 Outer membrane protein beta-barrel domain FY131_15455 PF03824 High-affinity nickel-transport protein FY131_15475 PF01081 KDPG and KHG aldolase FY131_15480 PF01928 CYTH domain FY131_15490 PF00581 Rhodanese-like domain FY131_15490 PF17773 UPF0176 acylphosphatase like domain FY131_15495 PF03707 Bacterial signalling protein N terminal repeat FY131_15495 PF00990 Diguanylate cyclase, GGDEF domain FY131_15495 PF13188 PAS domain FY131_15495 PF00563 EAL domain FY131_15500 PF03180 NLPA lipoprotein FY131_15505 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15510 PF00005 ABC transporter FY131_15510 PF09383 NIL domain FY131_15515 PF00881 Nitroreductase family FY131_15520 PF00232 Glycosyl hydrolase family 1 FY131_15525 PF01261 Xylose isomerase-like TIM barrel FY131_15530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY131_15530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY131_15535 PF00356 Bacterial regulatory proteins, lacI family FY131_15535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY131_15540 PF07690 Major Facilitator Superfamily FY131_15545 PF13533 Biotin-lipoyl like FY131_15550 PF00440 Bacterial regulatory proteins, tetR family FY131_15555 PF03741 Integral membrane protein TerC family FY131_15555 PF03471 Transporter associated domain FY131_15560 PF03600 Citrate transporter FY131_15560 PF02080 TrkA-C domain FY131_15565 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY131_15570 PF01336 OB-fold nucleic acid binding domain FY131_15570 PF00152 tRNA synthetases class II (D, K and N) FY131_15580 PF01297 Zinc-uptake complex component A periplasmic FY131_15585 PF00005 ABC transporter FY131_15590 PF00950 ABC 3 transport family FY131_15595 PF00950 ABC 3 transport family FY131_15600 PF07043 Protein of unknown function (DUF1328) FY131_15610 PF01614 Bacterial transcriptional regulator FY131_15610 PF09339 IclR helix-turn-helix domain FY131_15615 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY131_15620 PF04198 Putative sugar-binding domain FY131_15620 PF13936 Helix-turn-helix domain FY131_15625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY131_15625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY131_15635 PF10576 Iron-sulfur binding domain of endonuclease III FY131_15635 PF00633 Helix-hairpin-helix motif FY131_15635 PF00730 HhH-GPD superfamily base excision DNA repair protein FY131_15645 PF01418 Helix-turn-helix domain, rpiR family FY131_15645 PF01380 SIS domain FY131_15650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY131_15650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY131_15655 PF13419 Haloacid dehalogenase-like hydrolase FY131_15660 PF08125 Mannitol dehydrogenase C-terminal domain FY131_15660 PF01232 Mannitol dehydrogenase Rossmann domain FY131_15665 PF08402 TOBE domain FY131_15665 PF00005 ABC transporter FY131_15670 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15675 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15685 PF04198 Putative sugar-binding domain FY131_15690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_15690 PF00005 ABC transporter FY131_15695 PF01546 Peptidase family M20/M25/M40 FY131_15695 PF07687 Peptidase dimerisation domain FY131_15700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_15705 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15710 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_15710 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15720 PF01965 DJ-1/PfpI family FY131_15725 PF01425 Amidase FY131_15730 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_15730 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15735 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_15745 PF03466 LysR substrate binding domain FY131_15750 PF00005 ABC transporter FY131_15750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_15755 PF00005 ABC transporter FY131_15755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_15760 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_15760 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15765 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_15775 PF01244 Membrane dipeptidase (Peptidase family M19) FY131_15780 PF00156 Phosphoribosyl transferase domain FY131_15785 PF07687 Peptidase dimerisation domain FY131_15785 PF01546 Peptidase family M20/M25/M40 FY131_15790 PF07690 Major Facilitator Superfamily FY131_15795 PF01979 Amidohydrolase family FY131_15795 PF13382 Adenine deaminase C-terminal domain FY131_15805 PF08402 TOBE domain FY131_15805 PF00005 ABC transporter FY131_15815 PF00528 Binding-protein-dependent transport system inner membrane component FY131_15825 PF00356 Bacterial regulatory proteins, lacI family FY131_15830 PF03466 LysR substrate binding domain FY131_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_15835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY131_15835 PF02770 Acyl-CoA dehydrogenase, middle domain FY131_15835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_15840 PF07715 TonB-dependent Receptor Plug Domain FY131_15850 PF00296 Luciferase-like monooxygenase FY131_15855 PF00005 ABC transporter FY131_15860 PF01032 FecCD transport family FY131_15865 PF01032 FecCD transport family FY131_15875 PF08021 Siderophore-interacting FAD-binding domain FY131_15875 PF04954 Siderophore-interacting protein FY131_15885 PF00550 Phosphopantetheine attachment site FY131_15885 PF00668 Condensation domain FY131_15885 PF13193 AMP-binding enzyme C-terminal domain FY131_15885 PF00501 AMP-binding enzyme FY131_15885 PF00975 Thioesterase domain FY131_15890 PF00501 AMP-binding enzyme FY131_15890 PF00668 Condensation domain FY131_15890 PF00550 Phosphopantetheine attachment site FY131_15890 PF00975 Thioesterase domain FY131_15895 PF00501 AMP-binding enzyme FY131_15895 PF00550 Phosphopantetheine attachment site FY131_15895 PF00668 Condensation domain FY131_15895 PF13193 AMP-binding enzyme C-terminal domain FY131_15900 PF00425 chorismate binding enzyme FY131_15905 PF13193 AMP-binding enzyme C-terminal domain FY131_15905 PF00501 AMP-binding enzyme FY131_15910 PF00857 Isochorismatase family FY131_15910 PF00550 Phosphopantetheine attachment site FY131_15920 PF01648 4'-phosphopantetheinyl transferase superfamily FY131_15920 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY131_15935 PF01740 STAS domain FY131_15935 PF00916 Sulfate permease family FY131_15945 PF00924 Mechanosensitive ion channel FY131_15950 PF00551 Formyl transferase FY131_15955 PF00464 Serine hydroxymethyltransferase FY131_15965 PF01571 Aminomethyltransferase folate-binding domain FY131_15965 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY131_15965 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_15965 PF17806 Sarcosine oxidase A3 domain FY131_15975 PF01266 FAD dependent oxidoreductase FY131_15990 PF00356 Bacterial regulatory proteins, lacI family FY131_15995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_15995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_16000 PF01261 Xylose isomerase-like TIM barrel FY131_16005 PF13416 Bacterial extracellular solute-binding protein FY131_16010 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16015 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16020 PF03459 TOBE domain FY131_16020 PF17912 MalK OB fold domain FY131_16020 PF00005 ABC transporter FY131_16035 PF03471 Transporter associated domain FY131_16035 PF03741 Integral membrane protein TerC family FY131_16045 PF00459 Inositol monophosphatase family FY131_16065 PF00005 ABC transporter FY131_16065 PF08402 TOBE domain FY131_16070 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16075 PF00356 Bacterial regulatory proteins, lacI family FY131_16080 PF02690 Na+/Pi-cotransporter FY131_16095 PF00459 Inositol monophosphatase family FY131_16105 PF08946 Osmosensory transporter coiled coil FY131_16105 PF00083 Sugar (and other) transporter FY131_16115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY131_16115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY131_16120 PF00106 short chain dehydrogenase FY131_16125 PF02653 Branched-chain amino acid transport system / permease component FY131_16130 PF00005 ABC transporter FY131_16135 PF13407 Periplasmic binding protein domain FY131_16140 PF12833 Helix-turn-helix domain FY131_16145 PF08240 Alcohol dehydrogenase GroES-like domain FY131_16145 PF00107 Zinc-binding dehydrogenase FY131_16150 PF00440 Bacterial regulatory proteins, tetR family FY131_16165 PF00248 Aldo/keto reductase family FY131_16170 PF03786 D-mannonate dehydratase (UxuA) FY131_16175 PF01232 Mannitol dehydrogenase Rossmann domain FY131_16175 PF08125 Mannitol dehydrogenase C-terminal domain FY131_16185 PF00392 Bacterial regulatory proteins, gntR family FY131_16185 PF07729 FCD domain FY131_16195 PF02653 Branched-chain amino acid transport system / permease component FY131_16200 PF02653 Branched-chain amino acid transport system / permease component FY131_16205 PF00005 ABC transporter FY131_16210 PF01965 DJ-1/PfpI family FY131_16210 PF12833 Helix-turn-helix domain FY131_16215 PF01266 FAD dependent oxidoreductase FY131_16220 PF04267 Sarcosine oxidase, delta subunit family FY131_16225 PF01571 Aminomethyltransferase folate-binding domain FY131_16225 PF17806 Sarcosine oxidase A3 domain FY131_16225 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_16225 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY131_16245 PF02540 NAD synthase FY131_16250 PF13193 AMP-binding enzyme C-terminal domain FY131_16250 PF00501 AMP-binding enzyme FY131_16260 PF00733 Asparagine synthase FY131_16260 PF13537 Glutamine amidotransferase domain FY131_16270 PF11791 Aconitate B N-terminal domain FY131_16270 PF06434 Aconitate hydratase 2 N-terminus FY131_16270 PF00330 Aconitase family (aconitate hydratase) FY131_16275 PF02469 Fasciclin domain FY131_16280 PF07687 Peptidase dimerisation domain FY131_16280 PF01546 Peptidase family M20/M25/M40 FY131_16290 PF00294 pfkB family carbohydrate kinase FY131_16300 PF02126 Phosphotriesterase family FY131_16305 PF02653 Branched-chain amino acid transport system / permease component FY131_16310 PF00005 ABC transporter FY131_16320 PF00356 Bacterial regulatory proteins, lacI family FY131_16335 PF00563 EAL domain FY131_16335 PF03707 Bacterial signalling protein N terminal repeat FY131_16335 PF13188 PAS domain FY131_16335 PF00990 Diguanylate cyclase, GGDEF domain FY131_16345 PF00672 HAMP domain FY131_16345 PF02203 Tar ligand binding domain homologue FY131_16345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_16350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_16355 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16360 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_16360 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16365 PF00005 ABC transporter FY131_16365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_16385 PF00221 Aromatic amino acid lyase FY131_16390 PF00392 Bacterial regulatory proteins, gntR family FY131_16390 PF07702 UTRA domain FY131_16405 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16410 PF00571 CBS domain FY131_16410 PF00005 ABC transporter FY131_16415 PF00313 'Cold-shock' DNA-binding domain FY131_16420 PF00563 EAL domain FY131_16420 PF00990 Diguanylate cyclase, GGDEF domain FY131_16420 PF03707 Bacterial signalling protein N terminal repeat FY131_16425 PF01965 DJ-1/PfpI family FY131_16435 PF12804 MobA-like NTP transferase domain FY131_16435 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_16440 PF13478 XdhC Rossmann domain FY131_16440 PF02625 XdhC and CoxI family FY131_16445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY131_16445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY131_16450 PF00941 FAD binding domain in molybdopterin dehydrogenase FY131_16450 PF03450 CO dehydrogenase flavoprotein C-terminal domain FY131_16455 PF01799 [2Fe-2S] binding domain FY131_16455 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY131_16455 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_16470 PF07969 Amidohydrolase family FY131_16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_16485 PF03466 LysR substrate binding domain FY131_16490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY131_16495 PF03466 LysR substrate binding domain FY131_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_16500 PF04752 ChaC-like protein FY131_16505 PF00561 alpha/beta hydrolase fold FY131_16515 PF01047 MarR family FY131_16530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_16530 PF03466 LysR substrate binding domain FY131_16535 PF00561 alpha/beta hydrolase fold FY131_16540 PF00210 Ferritin-like domain FY131_16545 PF00190 Cupin FY131_16550 PF13426 PAS domain FY131_16550 PF08448 PAS fold FY131_16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_16550 PF00072 Response regulator receiver domain FY131_16550 PF00512 His Kinase A (phospho-acceptor) domain FY131_16555 PF00072 Response regulator receiver domain FY131_16555 PF00196 Bacterial regulatory proteins, luxR family FY131_16560 PF00196 Bacterial regulatory proteins, luxR family FY131_16560 PF00072 Response regulator receiver domain FY131_16570 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_16575 PF01494 FAD binding domain FY131_16580 PF07690 Major Facilitator Superfamily FY131_16585 PF00384 Molybdopterin oxidoreductase FY131_16595 PF00107 Zinc-binding dehydrogenase FY131_16595 PF08240 Alcohol dehydrogenase GroES-like domain FY131_16600 PF00106 short chain dehydrogenase FY131_16605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY131_16610 PF00106 short chain dehydrogenase FY131_16615 PF00440 Bacterial regulatory proteins, tetR family FY131_16625 PF00873 AcrB/AcrD/AcrF family FY131_16640 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_16640 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_16645 PF12327 FtsZ family, C-terminal domain FY131_16645 PF00091 Tubulin/FtsZ family, GTPase domain FY131_16685 PF01551 Peptidase family M23 FY131_16685 PF10145 Phage-related minor tail protein FY131_16685 PF01464 Transglycosylase SLT domain FY131_16690 PF07724 AAA domain (Cdc48 subfamily) FY131_16690 PF00004 ATPase family associated with various cellular activities (AAA) FY131_16690 PF17871 AAA lid domain FY131_16690 PF10431 C-terminal, D2-small domain, of ClpB protein FY131_16690 PF02861 Clp amino terminal domain, pathogenicity island component FY131_16700 PF05175 Methyltransferase small domain FY131_16700 PF17827 PrmC N-terminal domain FY131_16705 PF03462 PCRF domain FY131_16705 PF00472 RF-1 domain FY131_16710 PF02896 PEP-utilising enzyme, TIM barrel domain FY131_16710 PF01590 GAF domain FY131_16710 PF05524 PEP-utilising enzyme, N-terminal FY131_16710 PF00391 PEP-utilising enzyme, mobile domain FY131_16715 PF01842 ACT domain FY131_16715 PF13840 ACT domain FY131_16715 PF00696 Amino acid kinase family FY131_16720 PF00271 Helicase conserved C-terminal domain FY131_16720 PF00270 DEAD/DEAH box helicase FY131_16725 PF03435 Saccharopine dehydrogenase NADP binding domain FY131_16725 PF16653 Saccharopine dehydrogenase C-terminal domain FY131_16730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY131_16745 PF16363 GDP-mannose 4,6 dehydratase FY131_16755 PF13426 PAS domain FY131_16755 PF07536 HWE histidine kinase FY131_16760 PF08447 PAS fold FY131_16760 PF13426 PAS domain FY131_16760 PF07536 HWE histidine kinase FY131_16765 PF00072 Response regulator receiver domain FY131_16775 PF04542 Sigma-70 region 2 FY131_16775 PF08281 Sigma-70, region 4 FY131_16780 PF01037 Lrp/AsnC ligand binding domain FY131_16785 PF14850 DNA-binding domain of Proline dehydrogenase FY131_16785 PF00171 Aldehyde dehydrogenase family FY131_16785 PF01619 Proline dehydrogenase FY131_16785 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY131_16790 PF00005 ABC transporter FY131_16795 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16800 PF09084 NMT1/THI5 like FY131_16805 PF00171 Aldehyde dehydrogenase family FY131_16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_16810 PF03466 LysR substrate binding domain FY131_16815 PF13409 Glutathione S-transferase, N-terminal domain FY131_16825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY131_16825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY131_16825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY131_16830 PF16363 GDP-mannose 4,6 dehydratase FY131_16835 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY131_16835 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY131_16860 PF01965 DJ-1/PfpI family FY131_16870 PF05974 Domain of unknown function (DUF892) FY131_16875 PF01011 PQQ enzyme repeat FY131_16900 PF00501 AMP-binding enzyme FY131_16900 PF13193 AMP-binding enzyme C-terminal domain FY131_16905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY131_16905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY131_16910 PF05199 GMC oxidoreductase FY131_16910 PF00732 GMC oxidoreductase FY131_16915 PF11862 Domain of unknown function (DUF3382) FY131_16915 PF02653 Branched-chain amino acid transport system / permease component FY131_16920 PF02653 Branched-chain amino acid transport system / permease component FY131_16925 PF00005 ABC transporter FY131_16930 PF00005 ABC transporter FY131_16930 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY131_16945 PF00296 Luciferase-like monooxygenase FY131_16950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_16950 PF13378 Enolase C-terminal domain-like FY131_16955 PF00392 Bacterial regulatory proteins, gntR family FY131_16955 PF07729 FCD domain FY131_16960 PF00005 ABC transporter FY131_16960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_16965 PF00005 ABC transporter FY131_16965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_16970 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16970 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_16975 PF00528 Binding-protein-dependent transport system inner membrane component FY131_16980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_16985 PF00557 Metallopeptidase family M24 FY131_16985 PF01321 Creatinase/Prolidase N-terminal domain FY131_16990 PF00106 short chain dehydrogenase FY131_17020 PF00575 S1 RNA binding domain FY131_17025 PF02224 Cytidylate kinase FY131_17055 PF02445 Quinolinate synthetase A protein FY131_17060 PF00890 FAD binding domain FY131_17060 PF02910 Fumarate reductase flavoprotein C-term FY131_17065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY131_17065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY131_17085 PF08173 Membrane bound YbgT-like protein FY131_17090 PF02322 Cytochrome bd terminal oxidase subunit II FY131_17095 PF01654 Cytochrome bd terminal oxidase subunit I FY131_17100 PF00005 ABC transporter FY131_17100 PF00664 ABC transporter transmembrane region FY131_17105 PF00664 ABC transporter transmembrane region FY131_17105 PF00005 ABC transporter FY131_17115 PF00107 Zinc-binding dehydrogenase FY131_17115 PF08240 Alcohol dehydrogenase GroES-like domain FY131_17125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY131_17125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY131_17135 PF01037 Lrp/AsnC ligand binding domain FY131_17140 PF01177 Asp/Glu/Hydantoin racemase FY131_17155 PF00343 Carbohydrate phosphorylase FY131_17160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY131_17160 PF02806 Alpha amylase, C-terminal all-beta domain FY131_17160 PF00128 Alpha amylase, catalytic domain FY131_17165 PF00483 Nucleotidyl transferase FY131_17170 PF00534 Glycosyl transferases group 1 FY131_17170 PF08323 Starch synthase catalytic domain FY131_17175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY131_17175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY131_17175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY131_17175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY131_17180 PF00128 Alpha amylase, catalytic domain FY131_17180 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY131_17180 PF18390 Glycogen debranching enzyme C-terminal domain FY131_17185 PF01575 MaoC like domain FY131_17205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_17205 PF01571 Aminomethyltransferase folate-binding domain FY131_17205 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY131_17205 PF17806 Sarcosine oxidase A3 domain FY131_17220 PF01266 FAD dependent oxidoreductase FY131_17225 PF01165 Ribosomal protein S21 FY131_17240 PF11089 Exopolysaccharide production repressor FY131_17245 PF00535 Glycosyl transferase family 2 FY131_17250 PF04230 Polysaccharide pyruvyl transferase FY131_17255 PF00535 Glycosyl transferase family 2 FY131_17260 PF01943 Polysaccharide biosynthesis protein FY131_17265 PF01757 Acyltransferase family FY131_17270 PF00722 Glycosyl hydrolases family 16 FY131_17280 PF00535 Glycosyl transferase family 2 FY131_17285 PF00535 Glycosyl transferase family 2 FY131_17290 PF00535 Glycosyl transferase family 2 FY131_17295 PF00483 Nucleotidyl transferase FY131_17300 PF02706 Chain length determinant protein FY131_17300 PF13807 G-rich domain on putative tyrosine kinase FY131_17300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY131_17305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_17310 PF00072 Response regulator receiver domain FY131_17310 PF13426 PAS domain FY131_17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_17320 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17325 PF00005 ABC transporter FY131_17325 PF00571 CBS domain FY131_17330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY131_17330 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_17335 PF01205 Uncharacterized protein family UPF0029 FY131_17340 PF00849 RNA pseudouridylate synthase FY131_17345 PF04445 Putative SAM-dependent methyltransferase FY131_17355 PF07995 Glucose / Sorbosone dehydrogenase FY131_17365 PF00072 Response regulator receiver domain FY131_17365 PF00196 Bacterial regulatory proteins, luxR family FY131_17370 PF07730 Histidine kinase FY131_17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_17375 PF13407 Periplasmic binding protein domain FY131_17380 PF00005 ABC transporter FY131_17385 PF02653 Branched-chain amino acid transport system / permease component FY131_17395 PF08450 SMP-30/Gluconolactonase/LRE-like region FY131_17400 PF02631 RecX family FY131_17415 PF00005 ABC transporter FY131_17420 PF01032 FecCD transport family FY131_17430 PF07715 TonB-dependent Receptor Plug Domain FY131_17430 PF00593 TonB dependent receptor FY131_17435 PF03466 LysR substrate binding domain FY131_17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_17445 PF08019 Phosphoethanolamine transferase EptA/EptB FY131_17445 PF00884 Sulfatase FY131_17450 PF00072 Response regulator receiver domain FY131_17450 PF00486 Transcriptional regulatory protein, C terminal FY131_17455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_17455 PF00512 His Kinase A (phospho-acceptor) domain FY131_17460 PF00083 Sugar (and other) transporter FY131_17465 PF07756 Protein of unknown function (DUF1612) FY131_17465 PF11972 HTH DNA binding domain FY131_17475 PF00211 Adenylate and Guanylate cyclase catalytic domain FY131_17485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_17485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_17490 PF00892 EamA-like transporter family FY131_17495 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY131_17500 PF00491 Arginase family FY131_17515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY131_17515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY131_17520 PF00202 Aminotransferase class-III FY131_17530 PF00155 Aminotransferase class I and II FY131_17535 PF06968 Biotin and Thiamin Synthesis associated domain FY131_17535 PF04055 Radical SAM superfamily FY131_17540 PF13673 Acetyltransferase (GNAT) domain FY131_17585 PF01569 PAP2 superfamily FY131_17590 PF00486 Transcriptional regulatory protein, C terminal FY131_17590 PF00072 Response regulator receiver domain FY131_17595 PF00672 HAMP domain FY131_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_17595 PF00512 His Kinase A (phospho-acceptor) domain FY131_17610 PF01323 DSBA-like thioredoxin domain FY131_17615 PF01565 FAD binding domain FY131_17615 PF02913 FAD linked oxidases, C-terminal domain FY131_17620 PF00384 Molybdopterin oxidoreductase FY131_17620 PF01568 Molydopterin dinucleotide binding domain FY131_17625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_17630 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17635 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_17640 PF00005 ABC transporter FY131_17650 PF00296 Luciferase-like monooxygenase FY131_17655 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY131_17660 PF07690 Major Facilitator Superfamily FY131_17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_17665 PF03466 LysR substrate binding domain FY131_17670 PF01494 FAD binding domain FY131_17680 PF02567 Phenazine biosynthesis-like protein FY131_17685 PF00293 NUDIX domain FY131_17695 PF07729 FCD domain FY131_17695 PF00392 Bacterial regulatory proteins, gntR family FY131_17700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_17700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_17705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_17705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_17710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_17710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_17720 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17725 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17730 PF00005 ABC transporter FY131_17730 PF17912 MalK OB fold domain FY131_17735 PF00920 Dehydratase family FY131_17740 PF01370 NAD dependent epimerase/dehydratase family FY131_17745 PF03737 Aldolase/RraA FY131_17755 PF01758 Sodium Bile acid symporter family FY131_17760 PF03960 ArsC family FY131_17765 PF03358 NADPH-dependent FMN reductase FY131_17780 PF03466 LysR substrate binding domain FY131_17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_17785 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_17790 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17795 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17800 PF00005 ABC transporter FY131_17805 PF00491 Arginase family FY131_17810 PF03737 Aldolase/RraA FY131_17815 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_17820 PF00005 ABC transporter FY131_17825 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17830 PF00528 Binding-protein-dependent transport system inner membrane component FY131_17835 PF00106 short chain dehydrogenase FY131_17840 PF03466 LysR substrate binding domain FY131_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_17845 PF00155 Aminotransferase class I and II FY131_17850 PF03746 LamB/YcsF family FY131_17855 PF02626 Carboxyltransferase domain, subdomain A and B FY131_17870 PF02785 Biotin carboxylase C-terminal domain FY131_17870 PF00289 Biotin carboxylase, N-terminal domain FY131_17870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY131_17875 PF00364 Biotin-requiring enzyme FY131_17910 PF00392 Bacterial regulatory proteins, gntR family FY131_17910 PF07702 UTRA domain FY131_17915 PF01979 Amidohydrolase family FY131_17920 PF01979 Amidohydrolase family FY131_17925 PF00221 Aromatic amino acid lyase FY131_17935 PF01175 Urocanase Rossmann-like domain FY131_17935 PF17392 Urocanase C-terminal domain FY131_17935 PF17391 Urocanase N-terminal domain FY131_17940 PF12697 Alpha/beta hydrolase family FY131_17945 PF05962 HutD FY131_17950 PF07171 MlrC C-terminus FY131_17950 PF07364 Metallopeptidase family M81 FY131_17955 PF01168 Alanine racemase, N-terminal domain FY131_17955 PF14031 Putative serine dehydratase domain FY131_17960 PF01042 Endoribonuclease L-PSP FY131_17970 PF13614 AAA domain FY131_17975 PF02195 ParB-like nuclease domain FY131_17975 PF07506 RepB plasmid partitioning protein FY131_17980 PF03428 Replication protein C N-terminal domain FY131_17980 PF11800 Replication protein C C-terminal region FY131_17995 PF06772 Bacterial low temperature requirement A protein (LtrA) FY131_18000 PF00591 Glycosyl transferase family, a/b domain FY131_18000 PF02885 Glycosyl transferase family, helical bundle domain FY131_18005 PF07715 TonB-dependent Receptor Plug Domain FY131_18005 PF00593 TonB dependent receptor FY131_18010 PF00376 MerR family regulatory protein FY131_18010 PF09278 MerR, DNA binding FY131_18015 PF02806 Alpha amylase, C-terminal all-beta domain FY131_18015 PF00128 Alpha amylase, catalytic domain FY131_18020 PF00364 Biotin-requiring enzyme FY131_18020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY131_18020 PF02785 Biotin carboxylase C-terminal domain FY131_18020 PF00289 Biotin carboxylase, N-terminal domain FY131_18025 PF02682 Carboxyltransferase domain, subdomain C and D FY131_18030 PF07286 Protein of unknown function (DUF1445) FY131_18035 PF03746 LamB/YcsF family FY131_18040 PF01566 Natural resistance-associated macrophage protein FY131_18045 PF00392 Bacterial regulatory proteins, gntR family FY131_18045 PF07729 FCD domain FY131_18050 PF03861 ANTAR domain FY131_18050 PF08376 Nitrate and nitrite sensing FY131_18065 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18070 PF00005 ABC transporter FY131_18075 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_18075 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY131_18075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY131_18075 PF04324 BFD-like [2Fe-2S] binding domain FY131_18075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY131_18085 PF04324 BFD-like [2Fe-2S] binding domain FY131_18085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY131_18085 PF00384 Molybdopterin oxidoreductase FY131_18085 PF01568 Molydopterin dinucleotide binding domain FY131_18090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY131_18090 PF10414 Sirohaem synthase dimerisation region FY131_18090 PF14824 Sirohaem biosynthesis protein central FY131_18095 PF00455 DeoR C terminal sensor domain FY131_18095 PF08220 DeoR-like helix-turn-helix domain FY131_18100 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY131_18100 PF01266 FAD dependent oxidoreductase FY131_18105 PF08402 TOBE domain FY131_18105 PF00005 ABC transporter FY131_18110 PF17912 MalK OB fold domain FY131_18110 PF00005 ABC transporter FY131_18115 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18120 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY131_18135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY131_18140 PF03466 LysR substrate binding domain FY131_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_18145 PF13593 SBF-like CPA transporter family (DUF4137) FY131_18150 PF00011 Hsp20/alpha crystallin family FY131_18160 PF00459 Inositol monophosphatase family FY131_18170 PF00072 Response regulator receiver domain FY131_18180 PF13407 Periplasmic binding protein domain FY131_18185 PF00005 ABC transporter FY131_18190 PF02653 Branched-chain amino acid transport system / permease component FY131_18200 PF00248 Aldo/keto reductase family FY131_18205 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY131_18205 PF01266 FAD dependent oxidoreductase FY131_18210 PF01791 DeoC/LacD family aldolase FY131_18215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY131_18215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY131_18220 PF00672 HAMP domain FY131_18220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_18225 PF01047 MarR family FY131_18230 PF01070 FMN-dependent dehydrogenase FY131_18235 PF12848 ABC transporter FY131_18235 PF00005 ABC transporter FY131_18245 PF01841 Transglutaminase-like superfamily FY131_18245 PF08379 Bacterial transglutaminase-like N-terminal region FY131_18250 PF14403 Circularly permuted ATP-grasp type 2 FY131_18250 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY131_18275 PF03061 Thioesterase superfamily FY131_18295 PF00392 Bacterial regulatory proteins, gntR family FY131_18295 PF07729 FCD domain FY131_18300 PF00465 Iron-containing alcohol dehydrogenase FY131_18305 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY131_18315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_18320 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18325 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18325 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_18330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_18330 PF00005 ABC transporter FY131_18335 PF00701 Dihydrodipicolinate synthetase family FY131_18360 PF01493 GXGXG motif FY131_18365 PF01645 Conserved region in glutamate synthase FY131_18370 PF00120 Glutamine synthetase, catalytic domain FY131_18375 PF00551 Formyl transferase FY131_18380 PF07729 FCD domain FY131_18380 PF00392 Bacterial regulatory proteins, gntR family FY131_18390 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18395 PF00005 ABC transporter FY131_18400 PF00465 Iron-containing alcohol dehydrogenase FY131_18410 PF12697 Alpha/beta hydrolase family FY131_18415 PF01613 Flavin reductase like domain FY131_18420 PF00296 Luciferase-like monooxygenase FY131_18425 PF00171 Aldehyde dehydrogenase family FY131_18440 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18445 PF00528 Binding-protein-dependent transport system inner membrane component FY131_18450 PF00005 ABC transporter FY131_18450 PF08402 TOBE domain FY131_18455 PF00171 Aldehyde dehydrogenase family FY131_18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_18470 PF03466 LysR substrate binding domain FY131_18490 PF00487 Fatty acid desaturase FY131_18495 PF00440 Bacterial regulatory proteins, tetR family FY131_18495 PF13977 BetI-type transcriptional repressor, C-terminal FY131_18500 PF13533 Biotin-lipoyl like FY131_18510 PF00873 AcrB/AcrD/AcrF family FY131_18515 PF07729 FCD domain FY131_18515 PF00392 Bacterial regulatory proteins, gntR family FY131_18520 PF10415 Fumarase C C-terminus FY131_18520 PF00206 Lyase FY131_18525 PF00324 Amino acid permease FY131_18530 PF17763 Glutaminase/Asparaginase C-terminal domain FY131_18530 PF00710 Asparaginase, N-terminal FY131_18545 PF03814 Potassium-transporting ATPase A subunit FY131_18555 PF02669 K+-transporting ATPase, c chain FY131_18560 PF13492 GAF domain FY131_18560 PF00512 His Kinase A (phospho-acceptor) domain FY131_18560 PF13493 Domain of unknown function (DUF4118) FY131_18560 PF02702 Osmosensitive K+ channel His kinase sensor domain FY131_18560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_18565 PF00072 Response regulator receiver domain FY131_18565 PF00486 Transcriptional regulatory protein, C terminal FY131_18570 PF01212 Beta-eliminating lyase FY131_18575 PF01645 Conserved region in glutamate synthase FY131_18575 PF04898 Glutamate synthase central domain FY131_18575 PF00310 Glutamine amidotransferases class-II FY131_18575 PF01493 GXGXG motif FY131_18585 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_18585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY131_18590 PF00672 HAMP domain FY131_18590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_18590 PF00512 His Kinase A (phospho-acceptor) domain FY131_18595 PF00072 Response regulator receiver domain FY131_18595 PF00486 Transcriptional regulatory protein, C terminal FY131_18605 PF13406 Transglycosylase SLT domain FY131_18610 PF00483 Nucleotidyl transferase FY131_18625 PF00571 CBS domain FY131_18625 PF01380 SIS domain FY131_18635 PF01145 SPFH domain / Band 7 family FY131_18635 PF16200 C-terminal region of band_7 FY131_18640 PF00762 Ferrochelatase FY131_18645 PF00149 Calcineurin-like phosphoesterase FY131_18645 PF02872 5'-nucleotidase, C-terminal domain FY131_18655 PF03435 Saccharopine dehydrogenase NADP binding domain FY131_18655 PF16653 Saccharopine dehydrogenase C-terminal domain FY131_18660 PF00990 Diguanylate cyclase, GGDEF domain FY131_18665 PF01063 Amino-transferase class IV FY131_18670 PF08439 Oligopeptidase F FY131_18670 PF01432 Peptidase family M3 FY131_18675 PF00072 Response regulator receiver domain FY131_18675 PF02954 Bacterial regulatory protein, Fis family FY131_18675 PF00158 Sigma-54 interaction domain FY131_18680 PF05951 Bacterial protein of unknown function (DUF882) FY131_18685 PF00224 Pyruvate kinase, barrel domain FY131_18685 PF02887 Pyruvate kinase, alpha/beta domain FY131_18705 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY131_18715 PF00444 Ribosomal protein L36 FY131_18720 PF02222 ATP-grasp domain FY131_18720 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY131_18725 PF00731 AIR carboxylase FY131_18755 PF00459 Inositol monophosphatase family FY131_18765 PF00691 OmpA family FY131_18765 PF01389 OmpA-like transmembrane domain FY131_18770 PF00890 FAD binding domain FY131_18775 PF00005 ABC transporter FY131_18775 PF00664 ABC transporter transmembrane region FY131_18780 PF01197 Ribosomal protein L31 FY131_18800 PF00274 Fructose-bisphosphate aldolase class-I FY131_18805 PF00162 Phosphoglycerate kinase FY131_18810 PF00999 Sodium/hydrogen exchanger family FY131_18810 PF03471 Transporter associated domain FY131_18820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY131_18820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY131_18825 PF02780 Transketolase, C-terminal domain FY131_18825 PF00456 Transketolase, thiamine diphosphate binding domain FY131_18825 PF02779 Transketolase, pyrimidine binding domain FY131_18845 PF01595 Cyclin M transmembrane N-terminal domain FY131_18845 PF00571 CBS domain FY131_18845 PF03471 Transporter associated domain FY131_18855 PF13277 YmdB-like protein FY131_18870 PF01709 Transcriptional regulator FY131_18875 PF00296 Luciferase-like monooxygenase FY131_18880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_18880 PF00672 HAMP domain FY131_18885 PF02075 Crossover junction endodeoxyribonuclease RuvC FY131_18890 PF01330 RuvA N terminal domain FY131_18890 PF07499 RuvA, C-terminal domain FY131_18895 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY131_18895 PF05491 RuvB C-terminal winged helix domain FY131_18895 PF17864 RuvB AAA lid domain FY131_18910 PF00293 NUDIX domain FY131_18915 PF00293 NUDIX domain FY131_18920 PF03061 Thioesterase superfamily FY131_18925 PF01618 MotA/TolQ/ExbB proton channel family FY131_18930 PF02472 Biopolymer transport protein ExbD/TolR FY131_18940 PF07676 WD40-like Beta Propeller Repeat FY131_18940 PF04052 TolB amino-terminal domain FY131_18945 PF00691 OmpA family FY131_18955 PF01171 PP-loop family FY131_18960 PF00004 ATPase family associated with various cellular activities (AAA) FY131_18960 PF01434 Peptidase family M41 FY131_18960 PF06480 FtsH Extracellular FY131_18960 PF17862 AAA+ lid domain FY131_18965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY131_18965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY131_18965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY131_18965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY131_18970 PF13505 Outer membrane protein beta-barrel domain FY131_18980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_18980 PF01842 ACT domain FY131_18980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY131_19015 PF00085 Thioredoxin FY131_19025 PF03966 Trm112p-like protein FY131_19030 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY131_19030 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY131_19030 PF07703 Alpha-2-macroglobulin bait region domain FY131_19030 PF07678 A-macroglobulin TED domain FY131_19030 PF00207 Alpha-2-macroglobulin family FY131_19030 PF01835 MG2 domain FY131_19030 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY131_19030 PF17962 Bacterial macroglobulin domain 6 FY131_19030 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY131_19035 PF00905 Penicillin binding protein transpeptidase domain FY131_19035 PF06832 Penicillin-Binding Protein C-terminus Family FY131_19035 PF00912 Transglycosylase FY131_19045 PF07687 Peptidase dimerisation domain FY131_19045 PF01546 Peptidase family M20/M25/M40 FY131_19125 PF08459 UvrC Helix-hairpin-helix N-terminal FY131_19125 PF02151 UvrB/uvrC motif FY131_19125 PF01541 GIY-YIG catalytic domain FY131_19145 PF02796 Helix-turn-helix domain of resolvase FY131_19145 PF00239 Resolvase, N terminal domain FY131_19180 PF13408 Recombinase zinc beta ribbon domain FY131_19180 PF07508 Recombinase FY131_19180 PF00239 Resolvase, N terminal domain FY131_19185 PF00768 D-alanyl-D-alanine carboxypeptidase FY131_19185 PF07943 Penicillin-binding protein 5, C-terminal domain FY131_19190 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY131_19190 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY131_19195 PF01206 Sulfurtransferase TusA FY131_19200 PF03734 L,D-transpeptidase catalytic domain FY131_19205 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY131_19210 PF00589 Phage integrase family FY131_19210 PF02899 Phage integrase, N-terminal SAM-like domain FY131_19220 PF01202 Shikimate kinase FY131_19225 PF01761 3-dehydroquinate synthase FY131_19230 PF01722 BolA-like protein FY131_19235 PF00226 DnaJ domain FY131_19240 PF12556 Cobaltochelatase CobS subunit N terminal FY131_19240 PF08406 CbbQ/NirQ/NorQ C-terminal FY131_19240 PF07728 AAA domain (dynein-related subfamily) FY131_19245 PF06213 Cobalamin biosynthesis protein CobT FY131_19245 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY131_19260 PF02592 Putative vitamin uptake transporter FY131_19265 PF00830 Ribosomal L28 family FY131_19280 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY131_19280 PF00753 Metallo-beta-lactamase superfamily FY131_19285 PF01209 ubiE/COQ5 methyltransferase family FY131_19290 PF00155 Aminotransferase class I and II FY131_19295 PF02153 Prephenate dehydrogenase FY131_19310 PF04752 ChaC-like protein FY131_19330 PF00005 ABC transporter FY131_19340 PF00156 Phosphoribosyl transferase domain FY131_19345 PF00072 Response regulator receiver domain FY131_19355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY131_19355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY131_19365 PF14698 Argininosuccinate lyase C-terminal FY131_19365 PF00206 Lyase FY131_19370 PF08534 Redoxin FY131_19375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY131_19375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY131_19380 PF01012 Electron transfer flavoprotein domain FY131_19380 PF00766 Electron transfer flavoprotein FAD-binding domain FY131_19385 PF01012 Electron transfer flavoprotein domain FY131_19395 PF01923 Cobalamin adenosyltransferase FY131_19405 PF00106 short chain dehydrogenase FY131_19415 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY131_19420 PF02805 Metal binding domain of Ada FY131_19420 PF12833 Helix-turn-helix domain FY131_19420 PF00730 HhH-GPD superfamily base excision DNA repair protein FY131_19420 PF06029 AlkA N-terminal domain FY131_19425 PF01381 Helix-turn-helix FY131_19425 PF06114 IrrE N-terminal-like domain FY131_19425 PF09856 Predicted transcriptional regulator (DUF2083) FY131_19430 PF01039 Carboxyl transferase domain FY131_19435 PF02798 Glutathione S-transferase, N-terminal domain FY131_19445 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY131_19450 PF02785 Biotin carboxylase C-terminal domain FY131_19450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY131_19450 PF18140 Propionyl-coenzyme A carboxylase BT domain FY131_19450 PF00289 Biotin carboxylase, N-terminal domain FY131_19450 PF00364 Biotin-requiring enzyme FY131_19455 PF02310 B12 binding domain FY131_19455 PF01642 Methylmalonyl-CoA mutase FY131_19465 PF01266 FAD dependent oxidoreductase FY131_19465 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY131_19470 PF01022 Bacterial regulatory protein, arsR family FY131_19485 PF13407 Periplasmic binding protein domain FY131_19490 PF02653 Branched-chain amino acid transport system / permease component FY131_19495 PF00005 ABC transporter FY131_19505 PF01381 Helix-turn-helix FY131_19520 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY131_19545 PF00480 ROK family FY131_19545 PF01047 MarR family FY131_19555 PF00528 Binding-protein-dependent transport system inner membrane component FY131_19560 PF00528 Binding-protein-dependent transport system inner membrane component FY131_19565 PF00005 ABC transporter FY131_19565 PF17912 MalK OB fold domain FY131_19570 PF03009 Glycerophosphoryl diester phosphodiesterase family FY131_19580 PF00722 Glycosyl hydrolases family 16 FY131_19580 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY131_19585 PF01272 Transcription elongation factor, GreA/GreB, C-term FY131_19585 PF03449 Transcription elongation factor, N-terminal FY131_19600 PF00534 Glycosyl transferases group 1 FY131_19600 PF13439 Glycosyltransferase Family 4 FY131_19605 PF13439 Glycosyltransferase Family 4 FY131_19605 PF00534 Glycosyl transferases group 1 FY131_19625 PF13614 AAA domain FY131_19645 PF01943 Polysaccharide biosynthesis protein FY131_19700 PF01757 Acyltransferase family FY131_19710 PF02810 SEC-C motif FY131_19710 PF07517 SecA DEAD-like domain FY131_19710 PF01043 SecA preprotein cross-linking domain FY131_19710 PF07516 SecA Wing and Scaffold domain FY131_19720 PF01960 ArgJ family FY131_19725 PF00583 Acetyltransferase (GNAT) family FY131_19725 PF13508 Acetyltransferase (GNAT) domain FY131_19730 PF00293 NUDIX domain FY131_19745 PF08241 Methyltransferase domain FY131_19755 PF00462 Glutaredoxin FY131_19760 PF00795 Carbon-nitrogen hydrolase FY131_19770 PF08241 Methyltransferase domain FY131_19790 PF00378 Enoyl-CoA hydratase/isomerase FY131_19800 PF00528 Binding-protein-dependent transport system inner membrane component FY131_19805 PF00528 Binding-protein-dependent transport system inner membrane component FY131_19810 PF00005 ABC transporter FY131_19815 PF08713 DNA alkylation repair enzyme FY131_19820 PF00171 Aldehyde dehydrogenase family FY131_19830 PF08447 PAS fold FY131_19830 PF00563 EAL domain FY131_19830 PF08448 PAS fold FY131_19830 PF00990 Diguanylate cyclase, GGDEF domain FY131_19840 PF00561 alpha/beta hydrolase fold FY131_19850 PF05336 L-rhamnose mutarotase FY131_19855 PF02653 Branched-chain amino acid transport system / permease component FY131_19860 PF02653 Branched-chain amino acid transport system / permease component FY131_19865 PF00005 ABC transporter FY131_19870 PF13407 Periplasmic binding protein domain FY131_19875 PF08220 DeoR-like helix-turn-helix domain FY131_19875 PF00455 DeoR C terminal sensor domain FY131_19880 PF00596 Class II Aldolase and Adducin N-terminal domain FY131_19885 PF01261 Xylose isomerase-like TIM barrel FY131_19890 PF02548 Ketopantoate hydroxymethyltransferase FY131_19895 PF02569 Pantoate-beta-alanine ligase FY131_19900 PF00378 Enoyl-CoA hydratase/isomerase FY131_19905 PF00682 HMGL-like FY131_19910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY131_19910 PF00289 Biotin carboxylase, N-terminal domain FY131_19910 PF02785 Biotin carboxylase C-terminal domain FY131_19910 PF00364 Biotin-requiring enzyme FY131_19915 PF01039 Carboxyl transferase domain FY131_19920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_19920 PF02770 Acyl-CoA dehydrogenase, middle domain FY131_19920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY131_19925 PF01037 Lrp/AsnC ligand binding domain FY131_19930 PF00108 Thiolase, N-terminal domain FY131_19930 PF02803 Thiolase, C-terminal domain FY131_19935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_19935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY131_19935 PF02770 Acyl-CoA dehydrogenase, middle domain FY131_19940 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY131_19940 PF00676 Dehydrogenase E1 component FY131_19945 PF02780 Transketolase, C-terminal domain FY131_19945 PF02779 Transketolase, pyrimidine binding domain FY131_19950 PF02817 e3 binding domain FY131_19950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY131_19950 PF00364 Biotin-requiring enzyme FY131_19955 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY131_19955 PF01676 Metalloenzyme superfamily FY131_19965 PF04143 Sulphur transport FY131_19975 PF04273 Putative phosphatase (DUF442) FY131_19975 PF00753 Metallo-beta-lactamase superfamily FY131_19985 PF00106 short chain dehydrogenase FY131_19990 PF00561 alpha/beta hydrolase fold FY131_20000 PF07729 FCD domain FY131_20000 PF00392 Bacterial regulatory proteins, gntR family FY131_20010 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20015 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20015 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_20020 PF00005 ABC transporter FY131_20020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_20025 PF00005 ABC transporter FY131_20025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_20030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_20040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_20040 PF13378 Enolase C-terminal domain-like FY131_20045 PF00296 Luciferase-like monooxygenase FY131_20050 PF00296 Luciferase-like monooxygenase FY131_20060 PF05368 NmrA-like family FY131_20065 PF00296 Luciferase-like monooxygenase FY131_20070 PF07687 Peptidase dimerisation domain FY131_20070 PF01546 Peptidase family M20/M25/M40 FY131_20075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_20095 PF00296 Luciferase-like monooxygenase FY131_20100 PF03466 LysR substrate binding domain FY131_20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_20110 PF00248 Aldo/keto reductase family FY131_20115 PF00005 ABC transporter FY131_20115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_20120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_20120 PF00005 ABC transporter FY131_20125 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20130 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_20145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_20145 PF02770 Acyl-CoA dehydrogenase, middle domain FY131_20145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY131_20150 PF00296 Luciferase-like monooxygenase FY131_20165 PF00296 Luciferase-like monooxygenase FY131_20170 PF01613 Flavin reductase like domain FY131_20180 PF02082 Transcriptional regulator FY131_20185 PF00296 Luciferase-like monooxygenase FY131_20190 PF00296 Luciferase-like monooxygenase FY131_20195 PF01546 Peptidase family M20/M25/M40 FY131_20195 PF07687 Peptidase dimerisation domain FY131_20205 PF00005 ABC transporter FY131_20210 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_20220 PF01266 FAD dependent oxidoreductase FY131_20225 PF01037 Lrp/AsnC ligand binding domain FY131_20230 PF00005 ABC transporter FY131_20230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_20235 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20235 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_20240 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_20255 PF00202 Aminotransferase class-III FY131_20270 PF01266 FAD dependent oxidoreductase FY131_20275 PF00171 Aldehyde dehydrogenase family FY131_20280 PF00180 Isocitrate/isopropylmalate dehydrogenase FY131_20285 PF00171 Aldehyde dehydrogenase family FY131_20300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_20305 PF07687 Peptidase dimerisation domain FY131_20305 PF01546 Peptidase family M20/M25/M40 FY131_20320 PF01032 FecCD transport family FY131_20325 PF00005 ABC transporter FY131_20330 PF00127 Copper binding proteins, plastocyanin/azurin family FY131_20335 PF01209 ubiE/COQ5 methyltransferase family FY131_20350 PF01032 FecCD transport family FY131_20355 PF00005 ABC transporter FY131_20360 PF04542 Sigma-70 region 2 FY131_20360 PF08281 Sigma-70, region 4 FY131_20360 PF12680 SnoaL-like domain FY131_20370 PF00593 TonB dependent receptor FY131_20370 PF07715 TonB-dependent Receptor Plug Domain FY131_20380 PF00664 ABC transporter transmembrane region FY131_20380 PF00005 ABC transporter FY131_20385 PF00529 HlyD membrane-fusion protein of T1SS FY131_20385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY131_20390 PF00196 Bacterial regulatory proteins, luxR family FY131_20390 PF00072 Response regulator receiver domain FY131_20395 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20400 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20400 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_20405 PF00005 ABC transporter FY131_20405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_20420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_20435 PF01112 Asparaginase FY131_20440 PF03466 LysR substrate binding domain FY131_20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_20445 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20450 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_20450 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_20455 PF00005 ABC transporter FY131_20465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_20470 PF01546 Peptidase family M20/M25/M40 FY131_20475 PF13407 Periplasmic binding protein domain FY131_20480 PF00005 ABC transporter FY131_20485 PF02653 Branched-chain amino acid transport system / permease component FY131_20490 PF07722 Peptidase C26 FY131_20495 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_20500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_20505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY131_20525 PF01266 FAD dependent oxidoreductase FY131_20530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_20530 PF13426 PAS domain FY131_20530 PF08447 PAS fold FY131_20535 PF00296 Luciferase-like monooxygenase FY131_20540 PF03972 MmgE/PrpD family FY131_20545 PF00005 ABC transporter FY131_20550 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20555 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20560 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_20565 PF03949 Malic enzyme, NAD binding domain FY131_20565 PF01515 Phosphate acetyl/butaryl transferase FY131_20565 PF00390 Malic enzyme, N-terminal domain FY131_20570 PF03466 LysR substrate binding domain FY131_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_20575 PF01011 PQQ enzyme repeat FY131_20580 PF00483 Nucleotidyl transferase FY131_20580 PF01050 Mannose-6-phosphate isomerase FY131_20590 PF01547 Bacterial extracellular solute-binding protein FY131_20595 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20600 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20605 PF00005 ABC transporter FY131_20605 PF17912 MalK OB fold domain FY131_20615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_20615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_20620 PF06508 Queuosine biosynthesis protein QueC FY131_20625 PF01242 6-pyruvoyl tetrahydropterin synthase FY131_20630 PF04055 Radical SAM superfamily FY131_20635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_20635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_20645 PF03459 TOBE domain FY131_20645 PF17912 MalK OB fold domain FY131_20645 PF00005 ABC transporter FY131_20650 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20655 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20660 PF01547 Bacterial extracellular solute-binding protein FY131_20665 PF00356 Bacterial regulatory proteins, lacI family FY131_20675 PF02245 Methylpurine-DNA glycosylase (MPG) FY131_20695 PF03734 L,D-transpeptidase catalytic domain FY131_20695 PF17969 L,D-transpeptidase C-terminal domain FY131_20700 PF00672 HAMP domain FY131_20700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_20705 PF00202 Aminotransferase class-III FY131_20720 PF02397 Bacterial sugar transferase FY131_20725 PF02563 Polysaccharide biosynthesis/export protein FY131_20740 PF00529 HlyD membrane-fusion protein of T1SS FY131_20745 PF00664 ABC transporter transmembrane region FY131_20745 PF00005 ABC transporter FY131_20760 PF00196 Bacterial regulatory proteins, luxR family FY131_20770 PF16363 GDP-mannose 4,6 dehydratase FY131_20775 PF16363 GDP-mannose 4,6 dehydratase FY131_20805 PF07238 PilZ domain FY131_20805 PF03552 Cellulose synthase FY131_20805 PF00535 Glycosyl transferase family 2 FY131_20815 PF01270 Glycosyl hydrolases family 8 FY131_20825 PF07687 Peptidase dimerisation domain FY131_20825 PF01546 Peptidase family M20/M25/M40 FY131_20840 PF00202 Aminotransferase class-III FY131_20845 PF00892 EamA-like transporter family FY131_20850 PF00375 Sodium:dicarboxylate symporter family FY131_20855 PF00512 His Kinase A (phospho-acceptor) domain FY131_20855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_20860 PF02954 Bacterial regulatory protein, Fis family FY131_20860 PF00072 Response regulator receiver domain FY131_20860 PF00158 Sigma-54 interaction domain FY131_20875 PF01266 FAD dependent oxidoreductase FY131_20880 PF01168 Alanine racemase, N-terminal domain FY131_20880 PF00842 Alanine racemase, C-terminal domain FY131_20885 PF01037 Lrp/AsnC ligand binding domain FY131_20890 PF08543 Phosphomethylpyrimidine kinase FY131_20895 PF02581 Thiamine monophosphate synthase FY131_20900 PF02110 Hydroxyethylthiazole kinase family FY131_20905 PF09084 NMT1/THI5 like FY131_20910 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20920 PF01055 Glycosyl hydrolases family 31 FY131_20925 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20930 PF00528 Binding-protein-dependent transport system inner membrane component FY131_20935 PF01547 Bacterial extracellular solute-binding protein FY131_20940 PF08402 TOBE domain FY131_20940 PF00005 ABC transporter FY131_20945 PF00392 Bacterial regulatory proteins, gntR family FY131_20945 PF07702 UTRA domain FY131_20950 PF00296 Luciferase-like monooxygenase FY131_20955 PF00248 Aldo/keto reductase family FY131_20960 PF01613 Flavin reductase like domain FY131_20965 PF12951 Passenger-associated-transport-repeat FY131_20975 PF00873 AcrB/AcrD/AcrF family FY131_20980 PF13533 Biotin-lipoyl like FY131_20985 PF02563 Polysaccharide biosynthesis/export protein FY131_20995 PF13439 Glycosyltransferase Family 4 FY131_20995 PF00534 Glycosyl transferases group 1 FY131_21005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_21010 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21015 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_21015 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21020 PF01979 Amidohydrolase family FY131_21035 PF03841 L-seryl-tRNA selenium transferase FY131_21040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_21040 PF00005 ABC transporter FY131_21045 PF02798 Glutathione S-transferase, N-terminal domain FY131_21045 PF00043 Glutathione S-transferase, C-terminal domain FY131_21060 PF00296 Luciferase-like monooxygenase FY131_21065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_21065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY131_21070 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_21075 PF00171 Aldehyde dehydrogenase family FY131_21085 PF03786 D-mannonate dehydratase (UxuA) FY131_21090 PF08240 Alcohol dehydrogenase GroES-like domain FY131_21090 PF00107 Zinc-binding dehydrogenase FY131_21095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_21105 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_21110 PF00392 Bacterial regulatory proteins, gntR family FY131_21110 PF07729 FCD domain FY131_21115 PF13419 Haloacid dehalogenase-like hydrolase FY131_21120 PF05209 Septum formation inhibitor MinC, N-terminal domain FY131_21120 PF03775 Septum formation inhibitor MinC, C-terminal domain FY131_21125 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY131_21130 PF03776 Septum formation topological specificity factor MinE FY131_21145 PF08448 PAS fold FY131_21145 PF08447 PAS fold FY131_21145 PF00990 Diguanylate cyclase, GGDEF domain FY131_21145 PF00563 EAL domain FY131_21150 PF01425 Amidase FY131_21160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_21165 PF00480 ROK family FY131_21165 PF01047 MarR family FY131_21170 PF01547 Bacterial extracellular solute-binding protein FY131_21175 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21180 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21185 PF00005 ABC transporter FY131_21185 PF17912 MalK OB fold domain FY131_21185 PF03459 TOBE domain FY131_21195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_21195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_21205 PF05161 MOFRL family FY131_21205 PF13660 Domain of unknown function (DUF4147) FY131_21230 PF01336 OB-fold nucleic acid binding domain FY131_21230 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY131_21230 PF14579 Helix-hairpin-helix motif FY131_21230 PF02811 PHP domain FY131_21230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY131_21240 PF07690 Major Facilitator Superfamily FY131_21245 PF00392 Bacterial regulatory proteins, gntR family FY131_21245 PF07729 FCD domain FY131_21250 PF02653 Branched-chain amino acid transport system / permease component FY131_21255 PF02653 Branched-chain amino acid transport system / permease component FY131_21260 PF00005 ABC transporter FY131_21265 PF13407 Periplasmic binding protein domain FY131_21270 PF00920 Dehydratase family FY131_21280 PF00266 Aminotransferase class-V FY131_21285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_21285 PF00005 ABC transporter FY131_21290 PF00005 ABC transporter FY131_21290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_21295 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_21295 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21300 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_21310 PF01580 FtsK/SpoIIIE family FY131_21310 PF09397 Ftsk gamma domain FY131_21310 PF17854 FtsK alpha domain FY131_21310 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY131_21315 PF02615 Malate/L-lactate dehydrogenase FY131_21320 PF08448 PAS fold FY131_21320 PF08447 PAS fold FY131_21320 PF00990 Diguanylate cyclase, GGDEF domain FY131_21320 PF00563 EAL domain FY131_21330 PF07883 Cupin domain FY131_21330 PF05899 Protein of unknown function (DUF861) FY131_21335 PF13426 PAS domain FY131_21335 PF08448 PAS fold FY131_21335 PF05231 MASE1 FY131_21335 PF00990 Diguanylate cyclase, GGDEF domain FY131_21335 PF08447 PAS fold FY131_21335 PF00563 EAL domain FY131_21340 PF00005 ABC transporter FY131_21345 PF02653 Branched-chain amino acid transport system / permease component FY131_21350 PF13407 Periplasmic binding protein domain FY131_21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_21355 PF03466 LysR substrate binding domain FY131_21360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY131_21360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY131_21380 PF03922 OmpW family FY131_21390 PF08402 TOBE domain FY131_21390 PF00005 ABC transporter FY131_21395 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21400 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21405 PF13416 Bacterial extracellular solute-binding protein FY131_21410 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY131_21410 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY131_21425 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY131_21425 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY131_21430 PF00005 ABC transporter FY131_21435 PF00950 ABC 3 transport family FY131_21440 PF01297 Zinc-uptake complex component A periplasmic FY131_21450 PF01053 Cys/Met metabolism PLP-dependent enzyme FY131_21455 PF01547 Bacterial extracellular solute-binding protein FY131_21460 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21465 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21470 PF00005 ABC transporter FY131_21470 PF17912 MalK OB fold domain FY131_21475 PF08402 TOBE domain FY131_21475 PF00005 ABC transporter FY131_21480 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21485 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21490 PF08013 Tagatose 6 phosphate kinase FY131_21495 PF00294 pfkB family carbohydrate kinase FY131_21510 PF08240 Alcohol dehydrogenase GroES-like domain FY131_21510 PF16912 Glucose dehydrogenase C-terminus FY131_21515 PF00356 Bacterial regulatory proteins, lacI family FY131_21530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY131_21530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY131_21535 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_21545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_21550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_21550 PF03466 LysR substrate binding domain FY131_21555 PF07690 Major Facilitator Superfamily FY131_21560 PF02311 AraC-like ligand binding domain FY131_21560 PF12833 Helix-turn-helix domain FY131_21575 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21580 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21585 PF00005 ABC transporter FY131_21585 PF17912 MalK OB fold domain FY131_21590 PF00248 Aldo/keto reductase family FY131_21605 PF00392 Bacterial regulatory proteins, gntR family FY131_21605 PF07729 FCD domain FY131_21610 PF01370 NAD dependent epimerase/dehydratase family FY131_21615 PF04962 KduI/IolB family FY131_21625 PF00701 Dihydrodipicolinate synthetase family FY131_21630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_21630 PF13378 Enolase C-terminal domain-like FY131_21635 PF04909 Amidohydrolase FY131_21640 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_21650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_21655 PF02311 AraC-like ligand binding domain FY131_21655 PF12833 Helix-turn-helix domain FY131_21660 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21665 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21670 PF08402 TOBE domain FY131_21670 PF00005 ABC transporter FY131_21680 PF00295 Glycosyl hydrolases family 28 FY131_21685 PF07470 Glycosyl Hydrolase Family 88 FY131_21690 PF00512 His Kinase A (phospho-acceptor) domain FY131_21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_21690 PF00672 HAMP domain FY131_21695 PF00072 Response regulator receiver domain FY131_21695 PF00486 Transcriptional regulatory protein, C terminal FY131_21710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY131_21715 PF12704 MacB-like periplasmic core domain FY131_21715 PF02687 FtsX-like permease family FY131_21715 PF00005 ABC transporter FY131_21720 PF00550 Phosphopantetheine attachment site FY131_21750 PF01165 Ribosomal protein S21 FY131_21760 PF00313 'Cold-shock' DNA-binding domain FY131_21765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_21765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_21780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_21780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_21785 PF00440 Bacterial regulatory proteins, tetR family FY131_21785 PF17938 Tetracyclin repressor-like, C-terminal domain FY131_21790 PF13416 Bacterial extracellular solute-binding protein FY131_21795 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21800 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21805 PF00005 ABC transporter FY131_21805 PF17912 MalK OB fold domain FY131_21805 PF03459 TOBE domain FY131_21810 PF01261 Xylose isomerase-like TIM barrel FY131_21815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY131_21815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_21815 PF01842 ACT domain FY131_21825 PF00356 Bacterial regulatory proteins, lacI family FY131_21840 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY131_21845 PF00005 ABC transporter FY131_21845 PF17912 MalK OB fold domain FY131_21855 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21860 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21865 PF00005 ABC transporter FY131_21870 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21875 PF09084 NMT1/THI5 like FY131_21880 PF00296 Luciferase-like monooxygenase FY131_21885 PF00005 ABC transporter FY131_21885 PF17912 MalK OB fold domain FY131_21890 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21895 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21900 PF13416 Bacterial extracellular solute-binding protein FY131_21915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_21915 PF08447 PAS fold FY131_21915 PF13426 PAS domain FY131_21930 PF01590 GAF domain FY131_21930 PF00158 Sigma-54 interaction domain FY131_21930 PF02954 Bacterial regulatory protein, Fis family FY131_21935 PF00107 Zinc-binding dehydrogenase FY131_21935 PF08240 Alcohol dehydrogenase GroES-like domain FY131_21940 PF00743 Flavin-binding monooxygenase-like FY131_21950 PF00392 Bacterial regulatory proteins, gntR family FY131_21950 PF07729 FCD domain FY131_21955 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_21960 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21965 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21970 PF00005 ABC transporter FY131_21975 PF08402 TOBE domain FY131_21975 PF00005 ABC transporter FY131_21985 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21990 PF00528 Binding-protein-dependent transport system inner membrane component FY131_21995 PF01177 Asp/Glu/Hydantoin racemase FY131_22000 PF08281 Sigma-70, region 4 FY131_22000 PF04542 Sigma-70 region 2 FY131_22030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_22030 PF03466 LysR substrate binding domain FY131_22035 PF00144 Beta-lactamase FY131_22040 PF00392 Bacterial regulatory proteins, gntR family FY131_22040 PF07729 FCD domain FY131_22045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_22050 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22055 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_22055 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_22065 PF00005 ABC transporter FY131_22070 PF00512 His Kinase A (phospho-acceptor) domain FY131_22070 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY131_22070 PF01627 Hpt domain FY131_22070 PF00989 PAS fold FY131_22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_22070 PF00072 Response regulator receiver domain FY131_22075 PF00072 Response regulator receiver domain FY131_22080 PF02954 Bacterial regulatory protein, Fis family FY131_22080 PF00072 Response regulator receiver domain FY131_22080 PF00158 Sigma-54 interaction domain FY131_22090 PF00313 'Cold-shock' DNA-binding domain FY131_22100 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY131_22100 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FY131_22100 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal FY131_22105 PF00005 ABC transporter FY131_22105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_22110 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22110 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_22115 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_22130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_22130 PF03466 LysR substrate binding domain FY131_22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_22150 PF03466 LysR substrate binding domain FY131_22155 PF07690 Major Facilitator Superfamily FY131_22165 PF01053 Cys/Met metabolism PLP-dependent enzyme FY131_22170 PF01037 Lrp/AsnC ligand binding domain FY131_22180 PF00005 ABC transporter FY131_22180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_22190 PF00300 Histidine phosphatase superfamily (branch 1) FY131_22190 PF00106 short chain dehydrogenase FY131_22195 PF01266 FAD dependent oxidoreductase FY131_22200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_22205 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22210 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22210 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_22215 PF01266 FAD dependent oxidoreductase FY131_22225 PF03466 LysR substrate binding domain FY131_22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_22230 PF00795 Carbon-nitrogen hydrolase FY131_22245 PF00005 ABC transporter FY131_22245 PF08402 TOBE domain FY131_22250 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22255 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22260 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY131_22265 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY131_22270 PF04324 BFD-like [2Fe-2S] binding domain FY131_22270 PF01266 FAD dependent oxidoreductase FY131_22275 PF04324 BFD-like [2Fe-2S] binding domain FY131_22275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_22280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY131_22280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY131_22285 PF00723 Glycosyl hydrolases family 15 FY131_22285 PF09137 Glucodextranase, domain N FY131_22290 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY131_22290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY131_22295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY131_22295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY131_22305 PF00990 Diguanylate cyclase, GGDEF domain FY131_22310 PF00005 ABC transporter FY131_22310 PF06472 ABC transporter transmembrane region 2 FY131_22325 PF07690 Major Facilitator Superfamily FY131_22330 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY131_22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_22335 PF03466 LysR substrate binding domain FY131_22345 PF16363 GDP-mannose 4,6 dehydratase FY131_22350 PF01370 NAD dependent epimerase/dehydratase family FY131_22375 PF00196 Bacterial regulatory proteins, luxR family FY131_22375 PF00072 Response regulator receiver domain FY131_22380 PF02585 GlcNAc-PI de-N-acetylase FY131_22385 PF00483 Nucleotidyl transferase FY131_22390 PF08421 Putative zinc binding domain FY131_22390 PF08484 C-methyltransferase C-terminal domain FY131_22395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY131_22400 PF09940 Domain of unknown function (DUF2172) FY131_22400 PF16254 Domain of unknown function (DUF4910) FY131_22400 PF16221 winged helix-turn-helix FY131_22405 PF01370 NAD dependent epimerase/dehydratase family FY131_22410 PF00202 Aminotransferase class-III FY131_22415 PF00196 Bacterial regulatory proteins, luxR family FY131_22415 PF00072 Response regulator receiver domain FY131_22420 PF08448 PAS fold FY131_22420 PF01739 CheR methyltransferase, SAM binding domain FY131_22420 PF01339 CheB methylesterase FY131_22420 PF03705 CheR methyltransferase, all-alpha domain FY131_22440 PF13439 Glycosyltransferase Family 4 FY131_22440 PF00534 Glycosyl transferases group 1 FY131_22450 PF00953 Glycosyl transferase family 4 FY131_22470 PF00534 Glycosyl transferases group 1 FY131_22470 PF13439 Glycosyltransferase Family 4 FY131_22475 PF00534 Glycosyl transferases group 1 FY131_22475 PF13439 Glycosyltransferase Family 4 FY131_22485 PF00011 Hsp20/alpha crystallin family FY131_22495 PF13378 Enolase C-terminal domain-like FY131_22495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_22505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY131_22505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_22520 PF07940 Heparinase II/III-like protein FY131_22520 PF16889 Heparinase II/III N-terminus FY131_22525 PF01547 Bacterial extracellular solute-binding protein FY131_22530 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22535 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22540 PF00005 ABC transporter FY131_22540 PF17912 MalK OB fold domain FY131_22545 PF07729 FCD domain FY131_22545 PF00392 Bacterial regulatory proteins, gntR family FY131_22550 PF01266 FAD dependent oxidoreductase FY131_22555 PF00106 short chain dehydrogenase FY131_22555 PF00300 Histidine phosphatase superfamily (branch 1) FY131_22565 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_22570 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22575 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22580 PF00005 ABC transporter FY131_22585 PF01266 FAD dependent oxidoreductase FY131_22590 PF10415 Fumarase C C-terminus FY131_22590 PF00206 Lyase FY131_22595 PF01266 FAD dependent oxidoreductase FY131_22600 PF00005 ABC transporter FY131_22600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_22605 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22605 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_22610 PF00528 Binding-protein-dependent transport system inner membrane component FY131_22615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_22620 PF01968 Hydantoinase/oxoprolinase FY131_22620 PF05378 Hydantoinase/oxoprolinase N-terminal region FY131_22640 PF05378 Hydantoinase/oxoprolinase N-terminal region FY131_22640 PF01968 Hydantoinase/oxoprolinase FY131_22645 PF02538 Hydantoinase B/oxoprolinase FY131_22650 PF01037 Lrp/AsnC ligand binding domain FY131_22675 PF00501 AMP-binding enzyme FY131_22675 PF13193 AMP-binding enzyme C-terminal domain FY131_22685 PF09339 IclR helix-turn-helix domain FY131_22685 PF01614 Bacterial transcriptional regulator FY131_22695 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_22695 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY131_22700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_22705 PF04199 Putative cyclase FY131_22715 PF02566 OsmC-like protein FY131_22730 PF00512 His Kinase A (phospho-acceptor) domain FY131_22730 PF00672 HAMP domain FY131_22730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_22735 PF00486 Transcriptional regulatory protein, C terminal FY131_22735 PF00072 Response regulator receiver domain FY131_22740 PF00561 alpha/beta hydrolase fold FY131_22750 PF17991 Thioredoxin like C-terminal domain FY131_22750 PF02683 Cytochrome C biogenesis protein transmembrane region FY131_22750 PF00578 AhpC/TSA family FY131_22770 PF07690 Major Facilitator Superfamily FY131_22775 PF03193 RsgA GTPase FY131_22815 PF12419 SNF2 Helicase protein FY131_22815 PF00271 Helicase conserved C-terminal domain FY131_22815 PF00176 SNF2 family N-terminal domain FY131_22840 PF02371 Transposase IS116/IS110/IS902 family FY131_22840 PF01548 Transposase FY131_22895 PF01965 DJ-1/PfpI family FY131_22905 PF03389 MobA/MobL family FY131_22905 PF17841 BID domain of Bartonella effector protein (Bep) FY131_22905 PF01443 Viral (Superfamily 1) RNA helicase FY131_22910 PF02371 Transposase IS116/IS110/IS902 family FY131_22910 PF01548 Transposase FY131_22930 PF01695 IstB-like ATP binding protein FY131_22935 PF00665 Integrase core domain FY131_22965 PF00293 NUDIX domain FY131_22990 PF00376 MerR family regulatory protein FY131_22990 PF13614 AAA domain FY131_22995 PF07506 RepB plasmid partitioning protein FY131_22995 PF02195 ParB-like nuclease domain FY131_23000 PF03428 Replication protein C N-terminal domain FY131_23000 PF11800 Replication protein C C-terminal region FY131_23020 PF05199 GMC oxidoreductase FY131_23020 PF00732 GMC oxidoreductase FY131_23025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_23025 PF03466 LysR substrate binding domain FY131_23070 PF03328 HpcH/HpaI aldolase/citrate lyase family FY131_23075 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY131_23080 PF00775 Dioxygenase FY131_23080 PF04444 Catechol dioxygenase N terminus FY131_23105 PF11972 HTH DNA binding domain FY131_23105 PF07756 Protein of unknown function (DUF1612) FY131_23140 PF02954 Bacterial regulatory protein, Fis family FY131_23140 PF00072 Response regulator receiver domain FY131_23140 PF14532 Sigma-54 interaction domain FY131_23145 PF00072 Response regulator receiver domain FY131_23145 PF00196 Bacterial regulatory proteins, luxR family FY131_23150 PF00072 Response regulator receiver domain FY131_23150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_23150 PF08448 PAS fold FY131_23150 PF13426 PAS domain FY131_23150 PF00512 His Kinase A (phospho-acceptor) domain FY131_23155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_23175 PF03928 Haem-degrading FY131_23185 PF00561 alpha/beta hydrolase fold FY131_23190 PF00171 Aldehyde dehydrogenase family FY131_23195 PF00440 Bacterial regulatory proteins, tetR family FY131_23195 PF16925 Tetracyclin repressor-like, C-terminal domain FY131_23200 PF00196 Bacterial regulatory proteins, luxR family FY131_23205 PF00072 Response regulator receiver domain FY131_23205 PF02954 Bacterial regulatory protein, Fis family FY131_23205 PF00158 Sigma-54 interaction domain FY131_23210 PF12804 MobA-like NTP transferase domain FY131_23215 PF00072 Response regulator receiver domain FY131_23215 PF00196 Bacterial regulatory proteins, luxR family FY131_23220 PF00083 Sugar (and other) transporter FY131_23220 PF07690 Major Facilitator Superfamily FY131_23225 PF00106 short chain dehydrogenase FY131_23230 PF00196 Bacterial regulatory proteins, luxR family FY131_23235 PF00106 short chain dehydrogenase FY131_23245 PF00561 alpha/beta hydrolase fold FY131_23250 PF07690 Major Facilitator Superfamily FY131_23255 PF00034 Cytochrome c FY131_23260 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_23260 PF01799 [2Fe-2S] binding domain FY131_23265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY131_23275 PF13478 XdhC Rossmann domain FY131_23275 PF02625 XdhC and CoxI family FY131_23295 PF01638 HxlR-like helix-turn-helix FY131_23300 PF07536 HWE histidine kinase FY131_23300 PF13426 PAS domain FY131_23300 PF13581 Histidine kinase-like ATPase domain FY131_23320 PF00230 Major intrinsic protein FY131_23330 PF02979 Nitrile hydratase, alpha chain FY131_23340 PF00561 alpha/beta hydrolase fold FY131_23340 PF00364 Biotin-requiring enzyme FY131_23345 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_23345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY131_23350 PF00561 alpha/beta hydrolase fold FY131_23355 PF00196 Bacterial regulatory proteins, luxR family FY131_23355 PF03472 Autoinducer binding domain FY131_23365 PF00196 Bacterial regulatory proteins, luxR family FY131_23375 PF02525 Flavodoxin-like fold FY131_23380 PF02254 TrkA-N domain FY131_23380 PF00999 Sodium/hydrogen exchanger family FY131_23385 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY131_23385 PF00034 Cytochrome c FY131_23385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY131_23395 PF13533 Biotin-lipoyl like FY131_23400 PF00248 Aldo/keto reductase family FY131_23405 PF07690 Major Facilitator Superfamily FY131_23410 PF00106 short chain dehydrogenase FY131_23415 PF00561 alpha/beta hydrolase fold FY131_23420 PF01965 DJ-1/PfpI family FY131_23425 PF13533 Biotin-lipoyl like FY131_23430 PF00873 AcrB/AcrD/AcrF family FY131_23460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_23460 PF03466 LysR substrate binding domain FY131_23470 PF00005 ABC transporter FY131_23475 PF00528 Binding-protein-dependent transport system inner membrane component FY131_23485 PF00795 Carbon-nitrogen hydrolase FY131_23495 PF13378 Enolase C-terminal domain-like FY131_23495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_23500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_23500 PF03466 LysR substrate binding domain FY131_23525 PF12462 DNA helicase IV / RNA helicase N terminal FY131_23525 PF00580 UvrD/REP helicase N-terminal domain FY131_23525 PF13361 UvrD-like helicase C-terminal domain FY131_23540 PF04542 Sigma-70 region 2 FY131_23540 PF08281 Sigma-70, region 4 FY131_23555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_23555 PF13426 PAS domain FY131_23555 PF00072 Response regulator receiver domain FY131_23575 PF07690 Major Facilitator Superfamily FY131_23595 PF00266 Aminotransferase class-V FY131_23605 PF00202 Aminotransferase class-III FY131_23610 PF00293 NUDIX domain FY131_23615 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY131_23625 PF00155 Aminotransferase class I and II FY131_23630 PF02223 Thymidylate kinase FY131_23655 PF01048 Phosphorylase superfamily FY131_23660 PF00528 Binding-protein-dependent transport system inner membrane component FY131_23665 PF00005 ABC transporter FY131_23670 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FY131_23675 PF01180 Dihydroorotate dehydrogenase FY131_23680 PF01546 Peptidase family M20/M25/M40 FY131_23680 PF07687 Peptidase dimerisation domain FY131_23690 PF09386 Antitoxin ParD FY131_23705 PF07859 alpha/beta hydrolase fold FY131_23715 PF01638 HxlR-like helix-turn-helix FY131_23725 PF07690 Major Facilitator Superfamily FY131_23735 PF01177 Asp/Glu/Hydantoin racemase FY131_23740 PF14525 AraC-binding-like domain FY131_23740 PF12833 Helix-turn-helix domain FY131_23745 PF00106 short chain dehydrogenase FY131_23760 PF01292 Prokaryotic cytochrome b561 FY131_23765 PF00174 Oxidoreductase molybdopterin binding domain FY131_23780 PF01817 Chorismate mutase type II FY131_23780 PF02153 Prephenate dehydrogenase FY131_23785 PF03466 LysR substrate binding domain FY131_23785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_23790 PF00106 short chain dehydrogenase FY131_23795 PF00561 alpha/beta hydrolase fold FY131_23805 PF03734 L,D-transpeptidase catalytic domain FY131_23805 PF17969 L,D-transpeptidase C-terminal domain FY131_23815 PF01042 Endoribonuclease L-PSP FY131_23840 PF01548 Transposase FY131_23840 PF02371 Transposase IS116/IS110/IS902 family FY131_23850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_23850 PF03466 LysR substrate binding domain FY131_23860 PF00924 Mechanosensitive ion channel FY131_23870 PF06772 Bacterial low temperature requirement A protein (LtrA) FY131_23890 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY131_23915 PF02769 AIR synthase related protein, C-terminal domain FY131_23915 PF00586 AIR synthase related protein, N-terminal domain FY131_23925 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY131_23925 PF04055 Radical SAM superfamily FY131_23930 PF00795 Carbon-nitrogen hydrolase FY131_23940 PF00392 Bacterial regulatory proteins, gntR family FY131_23940 PF00155 Aminotransferase class I and II FY131_23955 PF02661 Fic/DOC family FY131_23955 PF12728 Helix-turn-helix domain FY131_23960 PF00005 ABC transporter FY131_23965 PF01032 FecCD transport family FY131_23970 PF01032 FecCD transport family FY131_23975 PF01497 Periplasmic binding protein FY131_23980 PF07715 TonB-dependent Receptor Plug Domain FY131_23980 PF07660 Secretin and TonB N terminus short domain FY131_23980 PF00593 TonB dependent receptor FY131_23995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_23995 PF03466 LysR substrate binding domain FY131_24000 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_24000 PF00550 Phosphopantetheine attachment site FY131_24000 PF14765 Polyketide synthase dehydratase FY131_24000 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_24000 PF00698 Acyl transferase domain FY131_24000 PF09277 Erythronolide synthase, docking FY131_24000 PF08990 Erythronolide synthase docking FY131_24000 PF08240 Alcohol dehydrogenase GroES-like domain FY131_24000 PF16197 Ketoacyl-synthetase C-terminal extension FY131_24000 PF08659 KR domain FY131_24010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_24015 PF00528 Binding-protein-dependent transport system inner membrane component FY131_24020 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_24020 PF00528 Binding-protein-dependent transport system inner membrane component FY131_24025 PF00005 ABC transporter FY131_24025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_24030 PF00005 ABC transporter FY131_24030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_24040 PF03466 LysR substrate binding domain FY131_24040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_24045 PF00144 Beta-lactamase FY131_24050 PF07519 Tannase and feruloyl esterase FY131_24060 PF01042 Endoribonuclease L-PSP FY131_24065 PF02525 Flavodoxin-like fold FY131_24070 PF01565 FAD binding domain FY131_24070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY131_24075 PF07969 Amidohydrolase family FY131_24080 PF00528 Binding-protein-dependent transport system inner membrane component FY131_24085 PF00005 ABC transporter FY131_24100 PF02633 Creatinine amidohydrolase FY131_24115 PF00529 HlyD membrane-fusion protein of T1SS FY131_24115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY131_24120 PF00873 AcrB/AcrD/AcrF family FY131_24130 PF13478 XdhC Rossmann domain FY131_24130 PF02625 XdhC and CoxI family FY131_24135 PF12804 MobA-like NTP transferase domain FY131_24140 PF00486 Transcriptional regulatory protein, C terminal FY131_24140 PF00072 Response regulator receiver domain FY131_24145 PF00512 His Kinase A (phospho-acceptor) domain FY131_24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_24145 PF00672 HAMP domain FY131_24150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY131_24150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY131_24155 PF00941 FAD binding domain in molybdopterin dehydrogenase FY131_24155 PF03450 CO dehydrogenase flavoprotein C-terminal domain FY131_24160 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY131_24160 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_24160 PF01799 [2Fe-2S] binding domain FY131_24165 PF01370 NAD dependent epimerase/dehydratase family FY131_24180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_24180 PF03466 LysR substrate binding domain FY131_24195 PF03466 LysR substrate binding domain FY131_24195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_24200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY131_24200 PF00753 Metallo-beta-lactamase superfamily FY131_24200 PF10996 Beta-Casp domain FY131_24205 PF00248 Aldo/keto reductase family FY131_24210 PF04444 Catechol dioxygenase N terminus FY131_24210 PF00775 Dioxygenase FY131_24215 PF00132 Bacterial transferase hexapeptide (six repeats) FY131_24225 PF00440 Bacterial regulatory proteins, tetR family FY131_24240 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY131_24240 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY131_24245 PF00941 FAD binding domain in molybdopterin dehydrogenase FY131_24245 PF03450 CO dehydrogenase flavoprotein C-terminal domain FY131_24250 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_24250 PF01799 [2Fe-2S] binding domain FY131_24255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY131_24265 PF01799 [2Fe-2S] binding domain FY131_24265 PF00111 2Fe-2S iron-sulfur cluster binding domain FY131_24295 PF00248 Aldo/keto reductase family FY131_24305 PF07690 Major Facilitator Superfamily FY131_24310 PF12833 Helix-turn-helix domain FY131_24310 PF06719 AraC-type transcriptional regulator N-terminus FY131_24315 PF12833 Helix-turn-helix domain FY131_24315 PF06719 AraC-type transcriptional regulator N-terminus FY131_24320 PF01381 Helix-turn-helix FY131_24335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY131_24340 PF00356 Bacterial regulatory proteins, lacI family FY131_24350 PF02653 Branched-chain amino acid transport system / permease component FY131_24355 PF00005 ABC transporter FY131_24365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_24365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_24375 PF07729 FCD domain FY131_24375 PF00392 Bacterial regulatory proteins, gntR family FY131_24385 PF01820 D-ala D-ala ligase N-terminus FY131_24385 PF07478 D-ala D-ala ligase C-terminus FY131_24400 PF01850 PIN domain FY131_24405 PF09957 Bacterial antitoxin of type II TA system, VapB FY131_24410 PF12833 Helix-turn-helix domain FY131_24410 PF02311 AraC-like ligand binding domain FY131_24425 PF00561 alpha/beta hydrolase fold FY131_24440 PF00440 Bacterial regulatory proteins, tetR family FY131_24455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_24455 PF00672 HAMP domain FY131_24475 PF04679 ATP dependent DNA ligase C terminal region FY131_24475 PF01068 ATP dependent DNA ligase domain FY131_24475 PF13298 DNA polymerase Ligase (LigD) FY131_24490 PF02811 PHP domain FY131_24490 PF14579 Helix-hairpin-helix motif FY131_24490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY131_24490 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY131_24510 PF05284 Protein of unknown function (DUF736) FY131_24515 PF00440 Bacterial regulatory proteins, tetR family FY131_24515 PF08361 MAATS-type transcriptional repressor, C-terminal region FY131_24520 PF00326 Prolyl oligopeptidase family FY131_24520 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY131_24530 PF00216 Bacterial DNA-binding protein FY131_24535 PF05406 WGR domain FY131_24540 PF02534 Type IV secretory system Conjugative DNA transfer FY131_24555 PF01443 Viral (Superfamily 1) RNA helicase FY131_24555 PF03389 MobA/MobL family FY131_24555 PF17841 BID domain of Bartonella effector protein (Bep) FY131_24590 PF12833 Helix-turn-helix domain FY131_24605 PF02254 TrkA-N domain FY131_24605 PF00999 Sodium/hydrogen exchanger family FY131_24620 PF01464 Transglycosylase SLT domain FY131_24620 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_24665 PF00155 Aminotransferase class I and II FY131_24670 PF00072 Response regulator receiver domain FY131_24670 PF00486 Transcriptional regulatory protein, C terminal FY131_24675 PF00072 Response regulator receiver domain FY131_24675 PF00486 Transcriptional regulatory protein, C terminal FY131_24685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY131_24685 PF00205 Thiamine pyrophosphate enzyme, central domain FY131_24685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY131_24690 PF00202 Aminotransferase class-III FY131_24700 PF00005 ABC transporter FY131_24700 PF08402 TOBE domain FY131_24705 PF00528 Binding-protein-dependent transport system inner membrane component FY131_24715 PF13416 Bacterial extracellular solute-binding protein FY131_24720 PF00005 ABC transporter FY131_24725 PF02687 FtsX-like permease family FY131_24725 PF12704 MacB-like periplasmic core domain FY131_24735 PF01614 Bacterial transcriptional regulator FY131_24735 PF09339 IclR helix-turn-helix domain FY131_24740 PF00171 Aldehyde dehydrogenase family FY131_24745 PF00465 Iron-containing alcohol dehydrogenase FY131_24750 PF00753 Metallo-beta-lactamase superfamily FY131_24785 PF02308 MgtC family FY131_24800 PF00043 Glutathione S-transferase, C-terminal domain FY131_24800 PF02798 Glutathione S-transferase, N-terminal domain FY131_24805 PF01638 HxlR-like helix-turn-helix FY131_24830 PF13007 Transposase C of IS166 homeodomain FY131_24830 PF13817 IS66 C-terminal element FY131_24830 PF03050 Transposase IS66 family FY131_24830 PF13005 zinc-finger binding domain of transposase IS66 FY131_24835 PF05717 IS66 Orf2 like protein FY131_24840 PF01527 Transposase FY131_24880 PF04956 TrbC/VIRB2 family FY131_24885 PF05101 Type IV secretory pathway, VirB3-like protein FY131_24890 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY131_24895 PF07996 Type IV secretion system proteins FY131_24905 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY131_24915 PF04335 VirB8 protein FY131_24920 PF03524 Conjugal transfer protein FY131_24925 PF03743 Bacterial conjugation TrbI-like protein FY131_24930 PF00437 Type II/IV secretion system protein FY131_24935 PF01022 Bacterial regulatory protein, arsR family FY131_24955 PF13005 zinc-finger binding domain of transposase IS66 FY131_24955 PF13007 Transposase C of IS166 homeodomain FY131_24955 PF13817 IS66 C-terminal element FY131_24955 PF03050 Transposase IS66 family FY131_24960 PF14760 Rnk N-terminus FY131_24960 PF01272 Transcription elongation factor, GreA/GreB, C-term FY131_24965 PF03449 Transcription elongation factor, N-terminal FY131_24965 PF01272 Transcription elongation factor, GreA/GreB, C-term FY131_24975 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FY131_24975 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FY131_24995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_24995 PF13426 PAS domain FY131_24995 PF00072 Response regulator receiver domain FY131_25000 PF08447 PAS fold FY131_25000 PF07536 HWE histidine kinase FY131_25000 PF13426 PAS domain FY131_25005 PF00226 DnaJ domain FY131_25015 PF01850 PIN domain FY131_25020 PF00701 Dihydrodipicolinate synthetase family FY131_25025 PF08450 SMP-30/Gluconolactonase/LRE-like region FY131_25030 PF07729 FCD domain FY131_25030 PF00392 Bacterial regulatory proteins, gntR family FY131_25035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_25040 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25045 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_25045 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_25050 PF00005 ABC transporter FY131_25055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_25055 PF13378 Enolase C-terminal domain-like FY131_25080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY131_25085 PF03480 Bacterial extracellular solute-binding protein, family 7 FY131_25090 PF00196 Bacterial regulatory proteins, luxR family FY131_25090 PF00072 Response regulator receiver domain FY131_25095 PF07730 Histidine kinase FY131_25095 PF17200 Single Cache domain 2 FY131_25100 PF06965 Na+/H+ antiporter 1 FY131_25130 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25135 PF08402 TOBE domain FY131_25135 PF00005 ABC transporter FY131_25140 PF00459 Inositol monophosphatase family FY131_25145 PF01594 AI-2E family transporter FY131_25160 PF05035 2-keto-3-deoxy-galactonokinase FY131_25165 PF00701 Dihydrodipicolinate synthetase family FY131_25170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY131_25170 PF13378 Enolase C-terminal domain-like FY131_25180 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25185 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25190 PF00005 ABC transporter FY131_25190 PF17912 MalK OB fold domain FY131_25195 PF16363 GDP-mannose 4,6 dehydratase FY131_25200 PF09339 IclR helix-turn-helix domain FY131_25200 PF01614 Bacterial transcriptional regulator FY131_25210 PF02311 AraC-like ligand binding domain FY131_25210 PF12833 Helix-turn-helix domain FY131_25225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_25225 PF03466 LysR substrate binding domain FY131_25230 PF00248 Aldo/keto reductase family FY131_25235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_25235 PF03466 LysR substrate binding domain FY131_25240 PF08240 Alcohol dehydrogenase GroES-like domain FY131_25240 PF00107 Zinc-binding dehydrogenase FY131_25245 PF00356 Bacterial regulatory proteins, lacI family FY131_25245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY131_25250 PF01261 Xylose isomerase-like TIM barrel FY131_25255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_25255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_25260 PF01261 Xylose isomerase-like TIM barrel FY131_25280 PF00535 Glycosyl transferase family 2 FY131_25280 PF07238 PilZ domain FY131_25280 PF03552 Cellulose synthase FY131_25300 PF08267 Cobalamin-independent synthase, N-terminal domain FY131_25300 PF01717 Cobalamin-independent synthase, Catalytic domain FY131_25310 PF00106 short chain dehydrogenase FY131_25315 PF04198 Putative sugar-binding domain FY131_25320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY131_25320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY131_25325 PF02779 Transketolase, pyrimidine binding domain FY131_25325 PF02780 Transketolase, C-terminal domain FY131_25330 PF00456 Transketolase, thiamine diphosphate binding domain FY131_25335 PF02653 Branched-chain amino acid transport system / permease component FY131_25340 PF13407 Periplasmic binding protein domain FY131_25345 PF00005 ABC transporter FY131_25355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY131_25385 PF00106 short chain dehydrogenase FY131_25405 PF03466 LysR substrate binding domain FY131_25405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_25415 PF00072 Response regulator receiver domain FY131_25415 PF13188 PAS domain FY131_25415 PF08448 PAS fold FY131_25415 PF00512 His Kinase A (phospho-acceptor) domain FY131_25415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_25420 PF06745 KaiC FY131_25425 PF02678 Pirin FY131_25425 PF17954 Quercetinase C-terminal cupin domain FY131_25430 PF00857 Isochorismatase family FY131_25435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_25435 PF03466 LysR substrate binding domain FY131_25440 PF01638 HxlR-like helix-turn-helix FY131_25445 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_25445 PF00698 Acyl transferase domain FY131_25445 PF08240 Alcohol dehydrogenase GroES-like domain FY131_25445 PF00107 Zinc-binding dehydrogenase FY131_25445 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_25445 PF14765 Polyketide synthase dehydratase FY131_25445 PF16197 Ketoacyl-synthetase C-terminal extension FY131_25445 PF08659 KR domain FY131_25445 PF00550 Phosphopantetheine attachment site FY131_25450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_25450 PF03466 LysR substrate binding domain FY131_25470 PF00175 Oxidoreductase NAD-binding domain FY131_25470 PF00970 Oxidoreductase FAD-binding domain FY131_25470 PF00042 Globin FY131_25475 PF02798 Glutathione S-transferase, N-terminal domain FY131_25480 PF00171 Aldehyde dehydrogenase family FY131_25485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_25485 PF03466 LysR substrate binding domain FY131_25510 PF00455 DeoR C terminal sensor domain FY131_25510 PF08220 DeoR-like helix-turn-helix domain FY131_25515 PF13407 Periplasmic binding protein domain FY131_25520 PF00005 ABC transporter FY131_25525 PF02653 Branched-chain amino acid transport system / permease component FY131_25530 PF02653 Branched-chain amino acid transport system / permease component FY131_25540 PF00294 pfkB family carbohydrate kinase FY131_25540 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY131_25545 PF01791 DeoC/LacD family aldolase FY131_25550 PF00171 Aldehyde dehydrogenase family FY131_25560 PF00795 Carbon-nitrogen hydrolase FY131_25565 PF00005 ABC transporter FY131_25565 PF09383 NIL domain FY131_25570 PF00005 ABC transporter FY131_25570 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY131_25580 PF02653 Branched-chain amino acid transport system / permease component FY131_25585 PF13458 Periplasmic binding protein FY131_25615 PF00924 Mechanosensitive ion channel FY131_25630 PF13533 Biotin-lipoyl like FY131_25655 PF06719 AraC-type transcriptional regulator N-terminus FY131_25655 PF12833 Helix-turn-helix domain FY131_25665 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY131_25670 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY131_25675 PF00459 Inositol monophosphatase family FY131_25690 PF01546 Peptidase family M20/M25/M40 FY131_25695 PF00455 DeoR C terminal sensor domain FY131_25695 PF08220 DeoR-like helix-turn-helix domain FY131_25700 PF00005 ABC transporter FY131_25700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_25705 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_25705 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25710 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_25725 PF17912 MalK OB fold domain FY131_25725 PF00005 ABC transporter FY131_25730 PF08240 Alcohol dehydrogenase GroES-like domain FY131_25730 PF00107 Zinc-binding dehydrogenase FY131_25735 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25740 PF00528 Binding-protein-dependent transport system inner membrane component FY131_25745 PF01547 Bacterial extracellular solute-binding protein FY131_25760 PF12833 Helix-turn-helix domain FY131_25765 PF00593 TonB dependent receptor FY131_25765 PF07715 TonB-dependent Receptor Plug Domain FY131_25775 PF00183 Hsp90 protein FY131_25780 PF13649 Methyltransferase domain FY131_25785 PF01161 Phosphatidylethanolamine-binding protein FY131_25815 PF00873 AcrB/AcrD/AcrF family FY131_25840 PF07731 Multicopper oxidase FY131_25840 PF07732 Multicopper oxidase FY131_25840 PF00394 Multicopper oxidase FY131_25845 PF04945 YHS domain FY131_25860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_25860 PF00512 His Kinase A (phospho-acceptor) domain FY131_25865 PF00072 Response regulator receiver domain FY131_25865 PF00486 Transcriptional regulatory protein, C terminal FY131_25905 PF00072 Response regulator receiver domain FY131_25905 PF00211 Adenylate and Guanylate cyclase catalytic domain FY131_25915 PF02796 Helix-turn-helix domain of resolvase FY131_25915 PF00239 Resolvase, N terminal domain FY131_25920 PF13700 Domain of unknown function (DUF4158) FY131_25920 PF01526 Tn3 transposase DDE domain FY131_25930 PF13936 Helix-turn-helix domain FY131_25930 PF00665 Integrase core domain FY131_25950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_25950 PF03466 LysR substrate binding domain FY131_25955 PF00248 Aldo/keto reductase family FY131_25990 PF00313 'Cold-shock' DNA-binding domain FY131_26000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_26000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_26005 PF00005 ABC transporter FY131_26010 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_26015 PF00356 Bacterial regulatory proteins, lacI family FY131_26020 PF13614 AAA domain FY131_26025 PF07506 RepB plasmid partitioning protein FY131_26025 PF02195 ParB-like nuclease domain FY131_26030 PF03428 Replication protein C N-terminal domain FY131_26030 PF11800 Replication protein C C-terminal region FY131_26035 PF00239 Resolvase, N terminal domain FY131_26040 PF11972 HTH DNA binding domain FY131_26040 PF07756 Protein of unknown function (DUF1612) FY131_26060 PF08808 RES domain FY131_26100 PF02653 Branched-chain amino acid transport system / permease component FY131_26105 PF00005 ABC transporter FY131_26115 PF00753 Metallo-beta-lactamase superfamily FY131_26120 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY131_26120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY131_26125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_26130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_26130 PF00005 ABC transporter FY131_26135 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_26135 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26140 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26150 PF00296 Luciferase-like monooxygenase FY131_26155 PF00296 Luciferase-like monooxygenase FY131_26160 PF03466 LysR substrate binding domain FY131_26160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_26170 PF01434 Peptidase family M41 FY131_26170 PF00004 ATPase family associated with various cellular activities (AAA) FY131_26170 PF17862 AAA+ lid domain FY131_26185 PF00005 ABC transporter FY131_26185 PF00664 ABC transporter transmembrane region FY131_26190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_26190 PF00005 ABC transporter FY131_26195 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_26195 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26200 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_26215 PF01261 Xylose isomerase-like TIM barrel FY131_26220 PF00291 Pyridoxal-phosphate dependent enzyme FY131_26225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY131_26235 PF02195 ParB-like nuclease domain FY131_26245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY131_26245 PF01842 ACT domain FY131_26245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY131_26250 PF00483 Nucleotidyl transferase FY131_26255 PF00155 Aminotransferase class I and II FY131_26280 PF04679 ATP dependent DNA ligase C terminal region FY131_26280 PF13298 DNA polymerase Ligase (LigD) FY131_26280 PF01068 ATP dependent DNA ligase domain FY131_26295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY131_26295 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY131_26295 PF14579 Helix-hairpin-helix motif FY131_26295 PF02811 PHP domain FY131_26310 PF17841 BID domain of Bartonella effector protein (Bep) FY131_26310 PF02661 Fic/DOC family FY131_26335 PF01638 HxlR-like helix-turn-helix FY131_26340 PF00107 Zinc-binding dehydrogenase FY131_26340 PF08240 Alcohol dehydrogenase GroES-like domain FY131_26345 PF17762 HTH domain found in ParB protein FY131_26345 PF02195 ParB-like nuclease domain FY131_26365 PF08274 PhnA Zinc-Ribbon FY131_26365 PF03831 PhnA domain FY131_26385 PF05284 Protein of unknown function (DUF736) FY131_26410 PF00293 NUDIX domain FY131_26415 PF05284 Protein of unknown function (DUF736) FY131_26420 PF00216 Bacterial DNA-binding protein FY131_26440 PF02534 Type IV secretory system Conjugative DNA transfer FY131_26445 PF06412 Conjugal transfer protein TraD FY131_26450 PF07820 TraC-like protein FY131_26455 PF03389 MobA/MobL family FY131_26455 PF17841 BID domain of Bartonella effector protein (Bep) FY131_26455 PF01443 Viral (Superfamily 1) RNA helicase FY131_26460 PF10502 Signal peptidase, peptidase S26 FY131_26465 PF00795 Carbon-nitrogen hydrolase FY131_26470 PF06871 TraH_2 FY131_26475 PF09228 Prokaryotic Transcriptional repressor TraM FY131_26480 PF13426 PAS domain FY131_26480 PF08447 PAS fold FY131_26480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY131_26490 PF03472 Autoinducer binding domain FY131_26490 PF00196 Bacterial regulatory proteins, luxR family FY131_26495 PF00128 Alpha amylase, catalytic domain FY131_26500 PF02690 Na+/Pi-cotransporter FY131_26510 PF08220 DeoR-like helix-turn-helix domain FY131_26510 PF00455 DeoR C terminal sensor domain FY131_26515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_26520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_26520 PF00005 ABC transporter FY131_26525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_26525 PF00005 ABC transporter FY131_26530 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26535 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_26535 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26540 PF03009 Glycerophosphoryl diester phosphodiesterase family FY131_26545 PF00459 Inositol monophosphatase family FY131_26570 PF00067 Cytochrome P450 FY131_26575 PF00067 Cytochrome P450 FY131_26590 PF06903 VirK protein FY131_26620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_26620 PF00512 His Kinase A (phospho-acceptor) domain FY131_26625 PF01464 Transglycosylase SLT domain FY131_26630 PF04956 TrbC/VIRB2 family FY131_26635 PF05101 Type IV secretory pathway, VirB3-like protein FY131_26640 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY131_26650 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY131_26655 PF17413 Outer membrane lipoprotein virB7 FY131_26660 PF04335 VirB8 protein FY131_26665 PF03524 Conjugal transfer protein FY131_26670 PF03743 Bacterial conjugation TrbI-like protein FY131_26675 PF00437 Type II/IV secretion system protein FY131_26680 PF00486 Transcriptional regulatory protein, C terminal FY131_26680 PF00072 Response regulator receiver domain FY131_26685 PF07181 VirC2 protein FY131_26690 PF07015 VirC1 protein FY131_26695 PF07328 T-DNA border endonuclease VirD1 FY131_26700 PF03432 Relaxase/Mobilisation nuclease domain FY131_26710 PF02534 Type IV secretory system Conjugative DNA transfer FY131_26725 PF12189 Single-strand DNA-binding protein FY131_26730 PF07229 VirE2 FY131_26780 PF02027 RolB/RolC glucosidase family FY131_26805 PF00106 short chain dehydrogenase FY131_26805 PF00300 Histidine phosphatase superfamily (branch 1) FY131_26815 PF02027 RolB/RolC glucosidase family FY131_26820 PF01425 Amidase FY131_26825 PF01593 Flavin containing amine oxidoreductase FY131_26825 PF02027 RolB/RolC glucosidase family FY131_26835 PF02027 RolB/RolC glucosidase family FY131_26840 PF02027 RolB/RolC glucosidase family FY131_26845 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY131_26845 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY131_26850 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY131_26855 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY131_26860 PF00491 Arginase family FY131_26865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_26865 PF04324 BFD-like [2Fe-2S] binding domain FY131_26875 PF01266 FAD dependent oxidoreductase FY131_26880 PF05378 Hydantoinase/oxoprolinase N-terminal region FY131_26880 PF01968 Hydantoinase/oxoprolinase FY131_26890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_26890 PF03466 LysR substrate binding domain FY131_26895 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26900 PF00528 Binding-protein-dependent transport system inner membrane component FY131_26905 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY131_26910 PF00005 ABC transporter FY131_26915 PF03466 LysR substrate binding domain FY131_26915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_26925 PF03743 Bacterial conjugation TrbI-like protein FY131_26935 PF03524 Conjugal transfer protein FY131_26940 PF04335 VirB8 protein FY131_26945 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY131_26950 PF10907 Protein of unknown function (DUF2749) FY131_26960 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY131_26965 PF05101 Type IV secretory pathway, VirB3-like protein FY131_26970 PF04956 TrbC/VIRB2 family FY131_26975 PF00437 Type II/IV secretion system protein FY131_26980 PF00765 Autoinducer synthase FY131_26985 PF13614 AAA domain FY131_26990 PF07506 RepB plasmid partitioning protein FY131_26990 PF02195 ParB-like nuclease domain FY131_26995 PF03428 Replication protein C N-terminal domain FY131_26995 PF11800 Replication protein C C-terminal region FY131_27000 PF13676 TIR domain FY131_27030 PF11972 HTH DNA binding domain FY131_27030 PF07756 Protein of unknown function (DUF1612) FY131_27055 PF00665 Integrase core domain FY131_27120 PF14031 Putative serine dehydratase domain FY131_27120 PF01168 Alanine racemase, N-terminal domain FY131_27130 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27135 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27140 PF17912 MalK OB fold domain FY131_27140 PF00005 ABC transporter FY131_27150 PF00480 ROK family FY131_27160 PF01168 Alanine racemase, N-terminal domain FY131_27160 PF14031 Putative serine dehydratase domain FY131_27175 PF03466 LysR substrate binding domain FY131_27175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_27180 PF00857 Isochorismatase family FY131_27195 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_27205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_27205 PF03466 LysR substrate binding domain FY131_27210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY131_27215 PF03466 LysR substrate binding domain FY131_27215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_27220 PF13533 Biotin-lipoyl like FY131_27245 PF00561 alpha/beta hydrolase fold FY131_27250 PF03358 NADPH-dependent FMN reductase FY131_27265 PF00596 Class II Aldolase and Adducin N-terminal domain FY131_27270 PF00171 Aldehyde dehydrogenase family FY131_27275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY131_27275 PF00205 Thiamine pyrophosphate enzyme, central domain FY131_27275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY131_27280 PF00005 ABC transporter FY131_27285 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27305 PF07976 Phenol hydroxylase, C-terminal dimerisation domain FY131_27305 PF01494 FAD binding domain FY131_27315 PF07756 Protein of unknown function (DUF1612) FY131_27315 PF11972 HTH DNA binding domain FY131_27330 PF13426 PAS domain FY131_27330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_27330 PF00072 Response regulator receiver domain FY131_27335 PF07687 Peptidase dimerisation domain FY131_27335 PF01546 Peptidase family M20/M25/M40 FY131_27340 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY131_27345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_27345 PF03466 LysR substrate binding domain FY131_27360 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27365 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27370 PF00005 ABC transporter FY131_27375 PF01042 Endoribonuclease L-PSP FY131_27380 PF13340 Putative transposase of IS4/5 family (DUF4096) FY131_27395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY131_27395 PF01348 Type II intron maturase FY131_27410 PF02615 Malate/L-lactate dehydrogenase FY131_27415 PF03928 Haem-degrading FY131_27425 PF17912 MalK OB fold domain FY131_27425 PF00005 ABC transporter FY131_27430 PF00480 ROK family FY131_27430 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY131_27435 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27440 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27450 PF01380 SIS domain FY131_27455 PF00480 ROK family FY131_27460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY131_27460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY131_27470 PF00682 HMGL-like FY131_27470 PF08502 LeuA allosteric (dimerisation) domain FY131_27490 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY131_27495 PF01850 PIN domain FY131_27520 PF02653 Branched-chain amino acid transport system / permease component FY131_27530 PF00005 ABC transporter FY131_27530 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY131_27535 PF00005 ABC transporter FY131_27545 PF01425 Amidase FY131_27555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_27555 PF03466 LysR substrate binding domain FY131_27560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY131_27565 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27570 PF00528 Binding-protein-dependent transport system inner membrane component FY131_27570 PF12911 N-terminal TM domain of oligopeptide transport permease C FY131_27580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY131_27580 PF00205 Thiamine pyrophosphate enzyme, central domain FY131_27580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY131_27585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY131_27585 PF00005 ABC transporter FY131_27590 PF05378 Hydantoinase/oxoprolinase N-terminal region FY131_27590 PF01968 Hydantoinase/oxoprolinase FY131_27605 PF01212 Beta-eliminating lyase FY131_27615 PF00202 Aminotransferase class-III FY131_27620 PF00171 Aldehyde dehydrogenase family FY131_27625 PF01565 FAD binding domain FY131_27625 PF09330 D-lactate dehydrogenase, membrane binding FY131_27630 PF07969 Amidohydrolase family FY131_27645 PF07687 Peptidase dimerisation domain FY131_27645 PF01546 Peptidase family M20/M25/M40 FY131_27650 PF00171 Aldehyde dehydrogenase family FY131_27660 PF00005 ABC transporter FY131_27665 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY131_27665 PF00005 ABC transporter FY131_27675 PF02653 Branched-chain amino acid transport system / permease component FY131_27680 PF13458 Periplasmic binding protein FY131_27690 PF12802 MarR family FY131_27720 PF02195 ParB-like nuclease domain FY131_27720 PF17762 HTH domain found in ParB protein FY131_27740 PF08401 Domain of unknown function (DUF1738) FY131_27740 PF13362 Toprim domain FY131_27740 PF18818 Metallopeptidase superfamily domain FY131_27745 PF05284 Protein of unknown function (DUF736) FY131_27755 PF05406 WGR domain FY131_27765 PF00293 NUDIX domain FY131_27775 PF02534 Type IV secretory system Conjugative DNA transfer FY131_27780 PF06412 Conjugal transfer protein TraD FY131_27785 PF07820 TraC-like protein FY131_27790 PF01443 Viral (Superfamily 1) RNA helicase FY131_27790 PF03389 MobA/MobL family FY131_27790 PF17841 BID domain of Bartonella effector protein (Bep) FY131_27795 PF10502 Signal peptidase, peptidase S26 FY131_27800 PF00795 Carbon-nitrogen hydrolase FY131_27805 PF06871 TraH_2 FY131_27820 PF01381 Helix-turn-helix FY131_27825 PF09228 Prokaryotic Transcriptional repressor TraM FY131_27830 PF03472 Autoinducer binding domain FY131_27830 PF00196 Bacterial regulatory proteins, luxR family FY131_27835 PF03743 Bacterial conjugation TrbI-like protein FY131_27840 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FY131_27850 PF04335 VirB8 protein FY131_27855 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY131_27870 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY131_27875 PF05101 Type IV secretory pathway, VirB3-like protein FY131_27880 PF04956 TrbC/VIRB2 family FY131_27885 PF00437 Type II/IV secretion system protein FY131_27890 PF00765 Autoinducer synthase FY131_27895 PF00578 AhpC/TSA family FY131_27900 PF02683 Cytochrome C biogenesis protein transmembrane region FY131_27900 PF11412 Disulphide bond corrector protein DsbC FY131_27905 PF00072 Response regulator receiver domain FY131_27905 PF00486 Transcriptional regulatory protein, C terminal FY131_27910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY131_27910 PF00512 His Kinase A (phospho-acceptor) domain FY131_27925 PF00753 Metallo-beta-lactamase superfamily FY131_27925 PF04273 Putative phosphatase (DUF442) FY131_27935 PF04143 Sulphur transport FY131_27945 PF01925 Sulfite exporter TauE/SafE FY131_27950 PF13098 Thioredoxin-like domain FY131_27955 PF00011 Hsp20/alpha crystallin family FY131_27965 PF00394 Multicopper oxidase FY131_27965 PF07731 Multicopper oxidase FY131_27965 PF07732 Multicopper oxidase FY131_27970 PF04945 YHS domain FY131_27985 PF07732 Multicopper oxidase FY131_28100 PF01464 Transglycosylase SLT domain FY131_28115 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY131_28120 PF01464 Transglycosylase SLT domain FY131_28150 PF03743 Bacterial conjugation TrbI-like protein FY131_28155 PF00437 Type II/IV secretion system protein FY131_28160 PF02534 Type IV secretory system Conjugative DNA transfer FY131_28200 PF01526 Tn3 transposase DDE domain FY131_28200 PF13700 Domain of unknown function (DUF4158) FY131_28205 PF02796 Helix-turn-helix domain of resolvase FY131_28205 PF00239 Resolvase, N terminal domain FY131_28215 PF00403 Heavy-metal-associated domain FY131_28220 PF02411 MerT mercuric transport protein FY131_28230 PF01502 Phosphoribosyl-AMP cyclohydrolase FY131_28240 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_28240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY131_28250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY131_28250 PF00403 Heavy-metal-associated domain FY131_28250 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY131_28265 PF02411 MerT mercuric transport protein FY131_28270 PF13411 MerR HTH family regulatory protein FY131_28275 PF03428 Replication protein C N-terminal domain FY131_28275 PF11800 Replication protein C C-terminal region FY131_28280 PF07506 RepB plasmid partitioning protein FY131_28280 PF02195 ParB-like nuclease domain FY131_28285 PF13614 AAA domain FY131_28285 PF00376 MerR family regulatory protein FY131_28290 PF08401 Domain of unknown function (DUF1738) FY131_28290 PF18818 Metallopeptidase superfamily domain FY131_28295 PF02661 Fic/DOC family FY131_28295 PF18543 Intracellular delivery domain FY131_28325 PF04679 ATP dependent DNA ligase C terminal region FY131_28325 PF01068 ATP dependent DNA ligase domain FY131_28325 PF13298 DNA polymerase Ligase (LigD) FY131_28390 PF00293 NUDIX domain FY131_28415 PF00067 Cytochrome P450 FY131_28420 PF01252 Signal peptidase (SPase) II FY131_28425 PF02683 Cytochrome C biogenesis protein transmembrane region FY131_28435 PF01545 Cation efflux family FY131_28440 PF01022 Bacterial regulatory protein, arsR family FY131_28445 PF01037 Lrp/AsnC ligand binding domain FY131_28455 PF04273 Putative phosphatase (DUF442) FY131_28455 PF00753 Metallo-beta-lactamase superfamily FY131_28460 PF01925 Sulfite exporter TauE/SafE FY131_28470 PF03734 L,D-transpeptidase catalytic domain FY131_28485 PF09278 MerR, DNA binding FY131_28485 PF00376 MerR family regulatory protein FY131_28490 PF13411 MerR HTH family regulatory protein FY131_28495 PF00067 Cytochrome P450 FY131_28505 PF00403 Heavy-metal-associated domain FY131_28510 PF01252 Signal peptidase (SPase) II FY131_28545 PF01695 IstB-like ATP binding protein FY131_28550 PF00665 Integrase core domain FY131_28555 PF03060 Nitronate monooxygenase FY131_28560 PF02798 Glutathione S-transferase, N-terminal domain FY131_28560 PF00043 Glutathione S-transferase, C-terminal domain FY131_28565 PF00698 Acyl transferase domain FY131_28565 PF08240 Alcohol dehydrogenase GroES-like domain FY131_28565 PF16197 Ketoacyl-synthetase C-terminal extension FY131_28565 PF02801 Beta-ketoacyl synthase, C-terminal domain FY131_28565 PF08659 KR domain FY131_28565 PF00550 Phosphopantetheine attachment site FY131_28565 PF14765 Polyketide synthase dehydratase FY131_28565 PF00109 Beta-ketoacyl synthase, N-terminal domain FY131_28570 PF03466 LysR substrate binding domain FY131_28570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_28575 PF03466 LysR substrate binding domain FY131_28575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY131_28580 PF00043 Glutathione S-transferase, C-terminal domain FY131_28580 PF02798 Glutathione S-transferase, N-terminal domain FY131_28615 PF01850 PIN domain FY131_28625 PF00239 Resolvase, N terminal domain FY131_28625 PF02796 Helix-turn-helix domain of resolvase FY131_28635 PF03734 L,D-transpeptidase catalytic domain FY131_28635 PF17969 L,D-transpeptidase C-terminal domain FY131_28640 PF13462 Thioredoxin FY131_28640 PF06965 Na+/H+ antiporter 1 FY131_28645 PF03734 L,D-transpeptidase catalytic domain FY131_28645 PF01476 LysM domain FY131_28650 PF13614 AAA domain FY131_28655 PF02195 ParB-like nuclease domain FY131_28655 PF07506 RepB plasmid partitioning protein FY131_28660 PF03428 Replication protein C N-terminal domain FY131_28660 PF11800 Replication protein C C-terminal region FY131_28680 PF00589 Phage integrase family FY131_28690 PF01526 Tn3 transposase DDE domain FY131_28690 PF13700 Domain of unknown function (DUF4158) FY131_28695 PF00239 Resolvase, N terminal domain FY131_28695 PF02796 Helix-turn-helix domain of resolvase FY131_28725 PF05284 Protein of unknown function (DUF736) FY131_28735 PF05406 WGR domain FY131_28745 PF02534 Type IV secretory system Conjugative DNA transfer FY131_28750 PF06412 Conjugal transfer protein TraD FY131_28755 PF07820 TraC-like protein FY131_28760 PF03389 MobA/MobL family FY131_28760 PF01443 Viral (Superfamily 1) RNA helicase FY131_28760 PF17841 BID domain of Bartonella effector protein (Bep) FY131_28765 PF10502 Signal peptidase, peptidase S26 FY131_28770 PF00795 Carbon-nitrogen hydrolase FY131_28775 PF06871 TraH_2 FY131_28795 PF00196 Bacterial regulatory proteins, luxR family FY131_28795 PF03472 Autoinducer binding domain FY131_28800 PF09228 Prokaryotic Transcriptional repressor TraM FY131_28810 PF00765 Autoinducer synthase FY131_28815 PF03743 Bacterial conjugation TrbI-like protein FY131_28820 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FY131_28825 PF03524 Conjugal transfer protein FY131_28830 PF04335 VirB8 protein FY131_28835 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY131_28850 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY131_28855 PF05101 Type IV secretory pathway, VirB3-like protein FY131_28860 PF04956 TrbC/VIRB2 family FY131_28865 PF00437 Type II/IV secretion system protein FY131_28905 PF02534 Type IV secretory system Conjugative DNA transfer FY131_28920 PF03389 MobA/MobL family FY131_28920 PF01443 Viral (Superfamily 1) RNA helicase FY131_28920 PF17841 BID domain of Bartonella effector protein (Bep) FY131_28935 PF00224 Pyruvate kinase, barrel domain FY131_28935 PF02887 Pyruvate kinase, alpha/beta domain FY131_28945 PF02896 PEP-utilising enzyme, TIM barrel domain FY131_28945 PF00391 PEP-utilising enzyme, mobile domain FY131_28945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY131_28970 PF17676 LD-carboxypeptidase C-terminal domain FY131_28970 PF02016 LD-carboxypeptidase N-terminal domain FY131_28980 PF13649 Methyltransferase domain FY131_29000 PF09334 tRNA synthetases class I (M) FY131_29000 PF13603 Leucyl-tRNA synthetase, Domain 2 FY131_29000 PF00133 tRNA synthetases class I (I, L, M and V) FY131_29000 PF08264 Anticodon-binding domain of tRNA FY131_29005 PF01209 ubiE/COQ5 methyltransferase family FY131_29010 PF01336 OB-fold nucleic acid binding domain FY131_29010 PF00152 tRNA synthetases class II (D, K and N) FY131_29015 PF02796 Helix-turn-helix domain of resolvase FY131_29015 PF00239 Resolvase, N terminal domain FY131_29025 PF00664 ABC transporter transmembrane region FY131_29025 PF00005 ABC transporter FY131_29030 PF13344 Haloacid dehalogenase-like hydrolase FY131_29030 PF00293 NUDIX domain FY131_29035 PF00293 NUDIX domain FY131_29040 PF13700 Domain of unknown function (DUF4158) FY131_29040 PF01526 Tn3 transposase DDE domain FY131_29055 PF17762 HTH domain found in ParB protein FY131_29055 PF02195 ParB-like nuclease domain FY131_29080 PF07015 VirC1 protein FY131_29100 PF00795 Carbon-nitrogen hydrolase FY131_29100 PF02540 NAD synthase FY131_29115 PF03389 MobA/MobL family FY131_29115 PF17841 BID domain of Bartonella effector protein (Bep) FY131_29115 PF01443 Viral (Superfamily 1) RNA helicase FY131_29125 PF01381 Helix-turn-helix FY131_29130 PF01526 Tn3 transposase DDE domain FY131_29130 PF13700 Domain of unknown function (DUF4158) FY131_29135 PF00239 Resolvase, N terminal domain FY131_29135 PF02796 Helix-turn-helix domain of resolvase FY131_29145 PF00239 Resolvase, N terminal domain FY131_29145 PF02796 Helix-turn-helix domain of resolvase FY131_29180 PF00239 Resolvase, N terminal domain FY131_29180 PF02796 Helix-turn-helix domain of resolvase FY131_29230 PF13614 AAA domain