locus-tag class description AVCG678_00005 PF00308 Bacterial dnaA protein AVCG678_00005 PF08299 Bacterial dnaA protein helix-turn-helix AVCG678_00005 PF11638 DnaA N-terminal domain AVCG678_00010 PF00892 EamA-like transporter family AVCG678_00015 PF13649 Methyltransferase domain AVCG678_00020 PF06969 HemN C-terminal domain AVCG678_00020 PF04055 Radical SAM superfamily AVCG678_00025 PF01725 Ham1 family AVCG678_00035 PF01138 3' exoribonuclease family, domain 1 AVCG678_00035 PF03725 3' exoribonuclease family, domain 2 AVCG678_00040 PF01628 HrcA protein C terminal domain AVCG678_00045 PF01025 GrpE AVCG678_00050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVCG678_00055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVCG678_00055 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AVCG678_00060 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVCG678_00060 PF04963 Sigma-54 factor, core binding domain AVCG678_00060 PF04552 Sigma-54, DNA binding domain AVCG678_00065 PF00005 ABC transporter AVCG678_00070 PF03968 OstA-like protein AVCG678_00080 PF00216 Bacterial DNA-binding protein AVCG678_00090 PF10672 S-adenosylmethionine-dependent methyltransferase AVCG678_00090 PF02926 THUMP domain AVCG678_00090 PF01170 Putative RNA methylase family UPF0020 AVCG678_00095 PF00588 SpoU rRNA Methylase family AVCG678_00095 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVCG678_00100 PF01252 Signal peptidase (SPase) II AVCG678_00105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVCG678_00105 PF00072 Response regulator receiver domain AVCG678_00105 PF01627 Hpt domain AVCG678_00105 PF00672 HAMP domain AVCG678_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_00105 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_00115 PF01624 MutS domain I AVCG678_00115 PF05188 MutS domain II AVCG678_00115 PF05192 MutS domain III AVCG678_00115 PF05190 MutS family domain IV AVCG678_00115 PF00488 MutS domain V AVCG678_00120 PF01842 ACT domain AVCG678_00120 PF08335 GlnD PII-uridylyltransferase AVCG678_00120 PF01966 HD domain AVCG678_00125 PF03023 Lipid II flippase MurJ AVCG678_00130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG678_00135 PF00579 tRNA synthetases class I (W and Y) AVCG678_00145 PF01106 NifU-like domain AVCG678_00150 PF00814 Glycoprotease family AVCG678_00160 PF01475 Ferric uptake regulator family AVCG678_00170 PF04055 Radical SAM superfamily AVCG678_00170 PF01938 TRAM domain AVCG678_00170 PF00919 Uncharacterized protein family UPF0004 AVCG678_00175 PF02562 PhoH-like protein AVCG678_00180 PF02130 Uncharacterized protein family UPF0054 AVCG678_00185 PF00571 CBS domain AVCG678_00185 PF03471 Transporter associated domain AVCG678_00190 PF00795 Carbon-nitrogen hydrolase AVCG678_00195 PF01381 Helix-turn-helix AVCG678_00200 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVCG678_00200 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVCG678_00200 PF02772 S-adenosylmethionine synthetase, central domain AVCG678_00205 PF02390 Putative methyltransferase AVCG678_00215 PF00011 Hsp20/alpha crystallin family AVCG678_00220 PF01156 Inosine-uridine preferring nucleoside hydrolase AVCG678_00235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_00235 PF00672 HAMP domain AVCG678_00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_00250 PF00468 Ribosomal protein L34 AVCG678_00255 PF00825 Ribonuclease P AVCG678_00260 PF14849 YidC periplasmic domain AVCG678_00260 PF02096 60Kd inner membrane protein AVCG678_00265 PF01926 50S ribosome-binding GTPase AVCG678_00270 PF02469 Fasciclin domain AVCG678_00285 PF00696 Amino acid kinase family AVCG678_00290 PF00294 pfkB family carbohydrate kinase AVCG678_00305 PF07559 Flagellar basal body protein FlaE AVCG678_00305 PF00460 Flagella basal body rod protein AVCG678_00305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG678_00315 PF14602 Hexapeptide repeat of succinyl-transferase AVCG678_00315 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVCG678_00315 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_00320 PF01546 Peptidase family M20/M25/M40 AVCG678_00320 PF07687 Peptidase dimerisation domain AVCG678_00335 PF05161 MOFRL family AVCG678_00335 PF13660 Domain of unknown function (DUF4147) AVCG678_00340 PF01430 Hsp33 protein AVCG678_00345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVCG678_00345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVCG678_00350 PF00202 Aminotransferase class-III AVCG678_00360 PF00072 Response regulator receiver domain AVCG678_00360 PF00486 Transcriptional regulatory protein, C terminal AVCG678_00365 PF01895 PhoU domain AVCG678_00370 PF00005 ABC transporter AVCG678_00375 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_00380 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_00390 PF16736 Single Cache-like AVCG678_00390 PF00989 PAS fold AVCG678_00390 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_00395 PF03976 Polyphosphate kinase 2 (PPK2) AVCG678_00415 PF00005 ABC transporter AVCG678_00415 PF00571 CBS domain AVCG678_00420 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_00435 PF00392 Bacterial regulatory proteins, gntR family AVCG678_00435 PF07702 UTRA domain AVCG678_00440 PF00221 Aromatic amino acid lyase AVCG678_00450 PF00202 Aminotransferase class-III AVCG678_00455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVCG678_00455 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVCG678_00465 PF03480 Bacterial extracellular solute-binding protein, family 7 AVCG678_00470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_00485 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVCG678_00485 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVCG678_00495 PF05544 Proline racemase AVCG678_00500 PF00027 Cyclic nucleotide-binding domain AVCG678_00500 PF13545 Crp-like helix-turn-helix domain AVCG678_00505 PF00072 Response regulator receiver domain AVCG678_00505 PF00486 Transcriptional regulatory protein, C terminal AVCG678_00515 PF17149 Periplasmic sensor domain found in signal transduction proteins AVCG678_00515 PF00672 HAMP domain AVCG678_00515 PF01627 Hpt domain AVCG678_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_00515 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_00515 PF00072 Response regulator receiver domain AVCG678_00520 PF00072 Response regulator receiver domain AVCG678_00525 PF01979 Amidohydrolase family AVCG678_00530 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_00535 PF00156 Phosphoribosyl transferase domain AVCG678_00540 PF00294 pfkB family carbohydrate kinase AVCG678_00550 PF00342 Phosphoglucose isomerase AVCG678_00555 PF00501 AMP-binding enzyme AVCG678_00555 PF13193 AMP-binding enzyme C-terminal domain AVCG678_00565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG678_00565 PF00128 Alpha amylase, catalytic domain AVCG678_00580 PF01416 tRNA pseudouridine synthase AVCG678_00585 PF02911 Formyl transferase, C-terminal domain AVCG678_00585 PF00551 Formyl transferase AVCG678_00590 PF01327 Polypeptide deformylase AVCG678_00595 PF04379 ApaG domain AVCG678_00600 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG678_00605 PF00692 dUTPase AVCG678_00630 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_00645 PF00196 Bacterial regulatory proteins, luxR family AVCG678_00645 PF00072 Response regulator receiver domain AVCG678_00655 PF01180 Dihydroorotate dehydrogenase AVCG678_00695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVCG678_00695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVCG678_00695 PF00378 Enoyl-CoA hydratase/isomerase AVCG678_00700 PF02803 Thiolase, C-terminal domain AVCG678_00700 PF00108 Thiolase, N-terminal domain AVCG678_00705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_00705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_00705 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_00705 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVCG678_00715 PF01925 Sulfite exporter TauE/SafE AVCG678_00725 PF00245 Alkaline phosphatase AVCG678_00735 PF00005 ABC transporter AVCG678_00750 PF00563 EAL domain AVCG678_00750 PF01590 GAF domain AVCG678_00750 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_00750 PF00360 Phytochrome region AVCG678_00755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AVCG678_00755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVCG678_00760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_00765 PF00270 DEAD/DEAH box helicase AVCG678_00765 PF08494 DEAD/H associated AVCG678_00765 PF00271 Helicase conserved C-terminal domain AVCG678_00775 PF03793 PASTA domain AVCG678_00775 PF00069 Protein kinase domain AVCG678_00785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVCG678_00790 PF00672 HAMP domain AVCG678_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_00790 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_00790 PF01627 Hpt domain AVCG678_00790 PF00072 Response regulator receiver domain AVCG678_00795 PF01741 Large-conductance mechanosensitive channel, MscL AVCG678_00800 PF00155 Aminotransferase class I and II AVCG678_00805 PF00483 Nucleotidyl transferase AVCG678_00810 PF16363 GDP-mannose 4,6 dehydratase AVCG678_00815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVCG678_00820 PF08484 C-methyltransferase C-terminal domain AVCG678_00820 PF08421 Putative zinc binding domain AVCG678_00825 PF00535 Glycosyl transferase family 2 AVCG678_00850 PF03884 DNA gyrase inhibitor YacG AVCG678_00855 PF02545 Maf-like protein AVCG678_00860 PF01176 Translation initiation factor 1A / IF-1 AVCG678_00870 PF06793 Uncharacterised protein family (UPF0262) AVCG678_00875 PF00815 Histidinol dehydrogenase AVCG678_00885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVCG678_00910 PF00005 ABC transporter AVCG678_00920 PF00535 Glycosyl transferase family 2 AVCG678_00930 PF00005 ABC transporter AVCG678_00930 PF12848 ABC transporter AVCG678_00940 PF00593 TonB dependent receptor AVCG678_00940 PF07715 TonB-dependent Receptor Plug Domain AVCG678_00955 PF01312 FlhB HrpN YscU SpaS Family AVCG678_00960 PF14842 FliG N-terminal domain AVCG678_00960 PF01706 FliG C-terminal domain AVCG678_00960 PF14841 FliG middle domain AVCG678_00965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVCG678_00970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVCG678_00975 PF01618 MotA/TolQ/ExbB proton channel family AVCG678_00980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG678_00980 PF00460 Flagella basal body rod protein AVCG678_00985 PF18269 T3SS EscN ATPase C-terminal domain AVCG678_00985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG678_00995 PF00460 Flagella basal body rod protein AVCG678_01000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG678_01005 PF02049 Flagellar hook-basal body complex protein FliE AVCG678_01010 PF00460 Flagella basal body rod protein AVCG678_01010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG678_01015 PF13144 Chaperone for flagella basal body P-ring formation AVCG678_01020 PF02119 Flagellar P-ring protein AVCG678_01030 PF02107 Flagellar L-ring protein AVCG678_01040 PF00813 FliP family AVCG678_01045 PF00669 Bacterial flagellin N-terminal helical region AVCG678_01045 PF00700 Bacterial flagellin C-terminal helical region AVCG678_01050 PF00669 Bacterial flagellin N-terminal helical region AVCG678_01050 PF00700 Bacterial flagellin C-terminal helical region AVCG678_01060 PF00700 Bacterial flagellin C-terminal helical region AVCG678_01060 PF00669 Bacterial flagellin N-terminal helical region AVCG678_01065 PF00700 Bacterial flagellin C-terminal helical region AVCG678_01065 PF00669 Bacterial flagellin N-terminal helical region AVCG678_01070 PF00700 Bacterial flagellin C-terminal helical region AVCG678_01070 PF00669 Bacterial flagellin N-terminal helical region AVCG678_01080 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVCG678_01080 PF00691 OmpA family AVCG678_01100 PF00486 Transcriptional regulatory protein, C terminal AVCG678_01105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG678_01105 PF00460 Flagella basal body rod protein AVCG678_01105 PF07559 Flagellar basal body protein FlaE AVCG678_01110 PF00460 Flagella basal body rod protein AVCG678_01110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG678_01125 PF07378 Flagellar protein FlbT AVCG678_01130 PF03963 Flagellar hook capping protein - N-terminal region AVCG678_01135 PF01313 Bacterial export proteins, family 3 AVCG678_01140 PF00771 FHIPEP family AVCG678_01175 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVCG678_01175 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVCG678_01180 PF00356 Bacterial regulatory proteins, lacI family AVCG678_01185 PF01547 Bacterial extracellular solute-binding protein AVCG678_01190 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_01195 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_01200 PF00128 Alpha amylase, catalytic domain AVCG678_01205 PF03459 TOBE domain AVCG678_01205 PF00005 ABC transporter AVCG678_01205 PF17912 MalK OB fold domain AVCG678_01225 PF03390 2-hydroxycarboxylate transporter family AVCG678_01230 PF02203 Tar ligand binding domain homologue AVCG678_01230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01230 PF00672 HAMP domain AVCG678_01235 PF00920 Dehydratase family AVCG678_01240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AVCG678_01245 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVCG678_01245 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVCG678_01250 PF01266 FAD dependent oxidoreductase AVCG678_01255 PF00120 Glutamine synthetase, catalytic domain AVCG678_01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01275 PF00672 HAMP domain AVCG678_01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_01280 PF03466 LysR substrate binding domain AVCG678_01295 PF07690 Major Facilitator Superfamily AVCG678_01305 PF00463 Isocitrate lyase family AVCG678_01310 PF06114 IrrE N-terminal-like domain AVCG678_01310 PF09856 Predicted transcriptional regulator (DUF2083) AVCG678_01310 PF01381 Helix-turn-helix AVCG678_01315 PF13416 Bacterial extracellular solute-binding protein AVCG678_01320 PF00005 ABC transporter AVCG678_01320 PF08402 TOBE domain AVCG678_01325 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_01330 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_01340 PF13188 PAS domain AVCG678_01340 PF00989 PAS fold AVCG678_01340 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_01340 PF13426 PAS domain AVCG678_01385 PF00171 Aldehyde dehydrogenase family AVCG678_01390 PF02082 Transcriptional regulator AVCG678_01395 PF01202 Shikimate kinase AVCG678_01400 PF02611 CDP-diacylglycerol pyrophosphatase AVCG678_01405 PF01266 FAD dependent oxidoreductase AVCG678_01410 PF07470 Glycosyl Hydrolase Family 88 AVCG678_01420 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_01420 PF00672 HAMP domain AVCG678_01425 PF00486 Transcriptional regulatory protein, C terminal AVCG678_01425 PF00072 Response regulator receiver domain AVCG678_01430 PF06039 Malate:quinone oxidoreductase (Mqo) AVCG678_01435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_01460 PF02541 Ppx/GppA phosphatase family AVCG678_01465 PF01728 FtsJ-like methyltransferase AVCG678_01475 PF00563 EAL domain AVCG678_01475 PF03707 Bacterial signalling protein N terminal repeat AVCG678_01475 PF13188 PAS domain AVCG678_01475 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_01480 PF00072 Response regulator receiver domain AVCG678_01480 PF00989 PAS fold AVCG678_01480 PF01627 Hpt domain AVCG678_01480 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVCG678_01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_01480 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_01485 PF01119 DNA mismatch repair protein, C-terminal domain AVCG678_01485 PF08676 MutL C terminal dimerisation domain AVCG678_01495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVCG678_01505 PF00534 Glycosyl transferases group 1 AVCG678_01505 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVCG678_01515 PF00459 Inositol monophosphatase family AVCG678_01520 PF01523 Putative modulator of DNA gyrase AVCG678_01525 PF02254 TrkA-N domain AVCG678_01525 PF00999 Sodium/hydrogen exchanger family AVCG678_01530 PF01734 Patatin-like phospholipase AVCG678_01540 PF00849 RNA pseudouridylate synthase AVCG678_01540 PF01479 S4 domain AVCG678_01545 PF14437 MafB19-like deaminase AVCG678_01550 PF00753 Metallo-beta-lactamase superfamily AVCG678_01555 PF07690 Major Facilitator Superfamily AVCG678_01565 PF08450 SMP-30/Gluconolactonase/LRE-like region AVCG678_01570 PF00196 Bacterial regulatory proteins, luxR family AVCG678_01570 PF03472 Autoinducer binding domain AVCG678_01580 PF10609 NUBPL iron-transfer P-loop NTPase AVCG678_01585 PF01544 CorA-like Mg2+ transporter protein AVCG678_01590 PF02705 K+ potassium transporter AVCG678_01595 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter AVCG678_01600 PF00119 ATP synthase A chain AVCG678_01605 PF00137 ATP synthase subunit C AVCG678_01610 PF00430 ATP synthase B/B' CF(0) AVCG678_01615 PF00430 ATP synthase B/B' CF(0) AVCG678_01620 PF01351 Ribonuclease HII AVCG678_01625 PF04055 Radical SAM superfamily AVCG678_01635 PF00994 Probable molybdopterin binding domain AVCG678_01640 PF00288 GHMP kinases N terminal domain AVCG678_01640 PF08544 GHMP kinases C terminal AVCG678_01650 PF00348 Polyprenyl synthetase AVCG678_01665 PF01343 Peptidase family S49 AVCG678_01665 PF06965 Na+/H+ antiporter 1 AVCG678_01675 PF07536 HWE histidine kinase AVCG678_01675 PF08447 PAS fold AVCG678_01675 PF13426 PAS domain AVCG678_01680 PF02091 Glycyl-tRNA synthetase alpha subunit AVCG678_01690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVCG678_01695 PF02092 Glycyl-tRNA synthetase beta subunit AVCG678_01695 PF05746 DALR anticodon binding domain AVCG678_01700 PF04463 Protein of unknown function (DUF523) AVCG678_01705 PF00672 HAMP domain AVCG678_01705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01705 PF00672 HAMP domain AVCG678_01705 PF17200 Single Cache domain 2 AVCG678_01705 PF17200 Single Cache domain 2 AVCG678_01715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVCG678_01715 PF02843 Phosphoribosylglycinamide synthetase, C domain AVCG678_01715 PF02844 Phosphoribosylglycinamide synthetase, N domain AVCG678_01725 PF17674 HHH domain AVCG678_01725 PF00575 S1 RNA binding domain AVCG678_01725 PF09371 Tex-like protein N-terminal domain AVCG678_01725 PF16921 Tex protein YqgF-like domain AVCG678_01735 PF01040 UbiA prenyltransferase family AVCG678_01740 PF02583 Metal-sensitive transcriptional repressor AVCG678_01765 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_01770 PF00005 ABC transporter AVCG678_01770 PF03459 TOBE domain AVCG678_01785 PF02913 FAD linked oxidases, C-terminal domain AVCG678_01785 PF01565 FAD binding domain AVCG678_01790 PF01300 Telomere recombination AVCG678_01790 PF03481 Putative GTP-binding controlling metal-binding AVCG678_01800 PF00672 HAMP domain AVCG678_01800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01800 PF02203 Tar ligand binding domain homologue AVCG678_01805 PF00355 Rieske [2Fe-2S] domain AVCG678_01805 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVCG678_01810 PF00970 Oxidoreductase FAD-binding domain AVCG678_01810 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_01810 PF00175 Oxidoreductase NAD-binding domain AVCG678_01820 PF07886 BA14K-like protein AVCG678_01830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_01830 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_01830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_01830 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVCG678_01835 PF00378 Enoyl-CoA hydratase/isomerase AVCG678_01840 PF00672 HAMP domain AVCG678_01840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01840 PF02743 Cache domain AVCG678_01850 PF05958 tRNA (Uracil-5-)-methyltransferase AVCG678_01855 PF01728 FtsJ-like methyltransferase AVCG678_01855 PF01479 S4 domain AVCG678_01860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01860 PF00672 HAMP domain AVCG678_01865 PF00672 HAMP domain AVCG678_01865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_01865 PF02203 Tar ligand binding domain homologue AVCG678_01870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVCG678_01870 PF02779 Transketolase, pyrimidine binding domain AVCG678_01870 PF02780 Transketolase, C-terminal domain AVCG678_01875 PF02609 Exonuclease VII small subunit AVCG678_01880 PF00850 Histone deacetylase domain AVCG678_01890 PF02632 BioY family AVCG678_01895 PF02361 Cobalt transport protein AVCG678_01900 PF00005 ABC transporter AVCG678_01905 PF00491 Arginase family AVCG678_01910 PF06224 Winged helix DNA-binding domain AVCG678_01930 PF00925 GTP cyclohydrolase II AVCG678_01930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVCG678_01935 PF01264 Chorismate synthase AVCG678_01940 PF03707 Bacterial signalling protein N terminal repeat AVCG678_01940 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_01940 PF00563 EAL domain AVCG678_01940 PF13188 PAS domain AVCG678_01950 PF00300 Histidine phosphatase superfamily (branch 1) AVCG678_01960 PF00226 DnaJ domain AVCG678_01960 PF01556 DnaJ C terminal domain AVCG678_01960 PF00684 DnaJ central domain AVCG678_01970 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVCG678_01970 PF01243 Pyridoxamine 5'-phosphate oxidase AVCG678_01980 PF07690 Major Facilitator Superfamily AVCG678_01985 PF09278 MerR, DNA binding AVCG678_01985 PF00376 MerR family regulatory protein AVCG678_01990 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG678_01990 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG678_02005 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_02015 PF01523 Putative modulator of DNA gyrase AVCG678_02025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVCG678_02025 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVCG678_02030 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVCG678_02035 PF01040 UbiA prenyltransferase family AVCG678_02045 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AVCG678_02050 PF00510 Cytochrome c oxidase subunit III AVCG678_02060 PF02104 SURF1 family AVCG678_02070 PF02401 LytB protein AVCG678_02075 PF00905 Penicillin binding protein transpeptidase domain AVCG678_02085 PF01810 LysE type translocator AVCG678_02090 PF00155 Aminotransferase class I and II AVCG678_02100 PF01636 Phosphotransferase enzyme family AVCG678_02105 PF00075 RNase H AVCG678_02115 PF01297 Zinc-uptake complex component A periplasmic AVCG678_02120 PF00950 ABC 3 transport family AVCG678_02125 PF00005 ABC transporter AVCG678_02130 PF00462 Glutaredoxin AVCG678_02130 PF08534 Redoxin AVCG678_02140 PF02622 Uncharacterized ACR, COG1678 AVCG678_02155 PF08447 PAS fold AVCG678_02155 PF08448 PAS fold AVCG678_02155 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_02155 PF00563 EAL domain AVCG678_02160 PF13302 Acetyltransferase (GNAT) domain AVCG678_02165 PF00675 Insulinase (Peptidase family M16) AVCG678_02165 PF05193 Peptidase M16 inactive domain AVCG678_02170 PF14821 Threonine synthase N terminus AVCG678_02170 PF00291 Pyridoxal-phosphate dependent enzyme AVCG678_02180 PF00781 Diacylglycerol kinase catalytic domain AVCG678_02185 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_02190 PF07729 FCD domain AVCG678_02190 PF00392 Bacterial regulatory proteins, gntR family AVCG678_02200 PF01555 DNA methylase AVCG678_02200 PF18755 Restriction Enzyme Adenine Methylase Associated AVCG678_02230 PF00730 HhH-GPD superfamily base excision DNA repair protein AVCG678_02230 PF14815 NUDIX domain AVCG678_02245 PF02463 RecF/RecN/SMC N terminal domain AVCG678_02255 PF07690 Major Facilitator Superfamily AVCG678_02270 PF00391 PEP-utilising enzyme, mobile domain AVCG678_02270 PF02896 PEP-utilising enzyme, TIM barrel domain AVCG678_02270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVCG678_02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_02285 PF03466 LysR substrate binding domain AVCG678_02295 PF01810 LysE type translocator AVCG678_02305 PF00529 HlyD membrane-fusion protein of T1SS AVCG678_02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG678_02310 PF00664 ABC transporter transmembrane region AVCG678_02310 PF00005 ABC transporter AVCG678_02325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_02325 PF02203 Tar ligand binding domain homologue AVCG678_02325 PF00672 HAMP domain AVCG678_02330 PF01507 Phosphoadenosine phosphosulfate reductase family AVCG678_02335 PF01507 Phosphoadenosine phosphosulfate reductase family AVCG678_02340 PF00009 Elongation factor Tu GTP binding domain AVCG678_02355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVCG678_02355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVCG678_02360 PF00356 Bacterial regulatory proteins, lacI family AVCG678_02360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVCG678_02370 PF00753 Metallo-beta-lactamase superfamily AVCG678_02370 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVCG678_02380 PF01965 DJ-1/PfpI family AVCG678_02400 PF00654 Voltage gated chloride channel AVCG678_02405 PF00700 Bacterial flagellin C-terminal helical region AVCG678_02405 PF00669 Bacterial flagellin N-terminal helical region AVCG678_02410 PF00654 Voltage gated chloride channel AVCG678_02430 PF05199 GMC oxidoreductase AVCG678_02430 PF00732 GMC oxidoreductase AVCG678_02435 PF00171 Aldehyde dehydrogenase family AVCG678_02440 PF00043 Glutathione S-transferase, C-terminal domain AVCG678_02440 PF13417 Glutathione S-transferase, N-terminal domain AVCG678_02445 PF00884 Sulfatase AVCG678_02445 PF12411 Choline sulfatase enzyme C terminal AVCG678_02450 PF13977 BetI-type transcriptional repressor, C-terminal AVCG678_02450 PF00440 Bacterial regulatory proteins, tetR family AVCG678_02455 PF12792 CSS motif domain associated with EAL AVCG678_02455 PF00563 EAL domain AVCG678_02465 PF14765 Polyketide synthase dehydratase AVCG678_02465 PF00550 Phosphopantetheine attachment site AVCG678_02465 PF08659 KR domain AVCG678_02465 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_02465 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_02465 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_02465 PF00107 Zinc-binding dehydrogenase AVCG678_02465 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_02465 PF00698 Acyl transferase domain AVCG678_02470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_02470 PF00672 HAMP domain AVCG678_02475 PF18071 HMW1C N-terminal AVCG678_02475 PF18254 HMW1 domain 2 AVCG678_02495 PF00455 DeoR C terminal sensor domain AVCG678_02495 PF08220 DeoR-like helix-turn-helix domain AVCG678_02510 PF08019 Phosphoethanolamine transferase EptA/EptB AVCG678_02510 PF00884 Sulfatase AVCG678_02540 PF07690 Major Facilitator Superfamily AVCG678_02555 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVCG678_02560 PF01810 LysE type translocator AVCG678_02565 PF00881 Nitroreductase family AVCG678_02590 PF03734 L,D-transpeptidase catalytic domain AVCG678_02590 PF01476 LysM domain AVCG678_02590 PF17969 L,D-transpeptidase C-terminal domain AVCG678_02595 PF17969 L,D-transpeptidase C-terminal domain AVCG678_02595 PF03734 L,D-transpeptidase catalytic domain AVCG678_02600 PF01047 MarR family AVCG678_02605 PF02566 OsmC-like protein AVCG678_02615 PF12282 Signal transduction histidine kinase AVCG678_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_02615 PF07568 Histidine kinase AVCG678_02620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_02620 PF00072 Response regulator receiver domain AVCG678_02620 PF13426 PAS domain AVCG678_02630 PF00156 Phosphoribosyl transferase domain AVCG678_02640 PF00672 HAMP domain AVCG678_02640 PF02203 Tar ligand binding domain homologue AVCG678_02640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_02645 PF00672 HAMP domain AVCG678_02645 PF02203 Tar ligand binding domain homologue AVCG678_02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_02655 PF05872 Bacterial protein of unknown function (DUF853) AVCG678_02660 PF02463 RecF/RecN/SMC N terminal domain AVCG678_02670 PF00672 HAMP domain AVCG678_02670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_02675 PF02673 Bacitracin resistance protein BacA AVCG678_02680 PF00005 ABC transporter AVCG678_02685 PF02653 Branched-chain amino acid transport system / permease component AVCG678_02690 PF13407 Periplasmic binding protein domain AVCG678_02695 PF01047 MarR family AVCG678_02695 PF00480 ROK family AVCG678_02715 PF00005 ABC transporter AVCG678_02720 PF01032 FecCD transport family AVCG678_02735 PF01209 ubiE/COQ5 methyltransferase family AVCG678_02760 PF00034 Cytochrome c AVCG678_02765 PF01322 Cytochrome C' AVCG678_02780 PF13302 Acetyltransferase (GNAT) domain AVCG678_02785 PF02525 Flavodoxin-like fold AVCG678_02790 PF01638 HxlR-like helix-turn-helix AVCG678_02800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVCG678_02800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVCG678_02805 PF03692 Putative zinc- or iron-chelating domain AVCG678_02810 PF13426 PAS domain AVCG678_02810 PF08448 PAS fold AVCG678_02810 PF05231 MASE1 AVCG678_02810 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_02810 PF08447 PAS fold AVCG678_02810 PF00563 EAL domain AVCG678_02815 PF01063 Amino-transferase class IV AVCG678_02820 PF07731 Multicopper oxidase AVCG678_02820 PF07732 Multicopper oxidase AVCG678_02830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AVCG678_02830 PF00326 Prolyl oligopeptidase family AVCG678_02855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG678_02860 PF00582 Universal stress protein family AVCG678_02870 PF01124 MAPEG family AVCG678_02875 PF03006 Haemolysin-III related AVCG678_02880 PF00325 Bacterial regulatory proteins, crp family AVCG678_02880 PF00027 Cyclic nucleotide-binding domain AVCG678_02900 PF05443 ROS/MUCR transcriptional regulator protein AVCG678_02905 PF03334 Na+/H+ antiporter subunit AVCG678_02910 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVCG678_02915 PF01899 Na+/H+ ion antiporter subunit AVCG678_02920 PF00361 Proton-conducting membrane transporter AVCG678_02925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVCG678_02930 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVCG678_02935 PF13244 Domain of unknown function (DUF4040) AVCG678_02935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG678_02935 PF00361 Proton-conducting membrane transporter AVCG678_02940 PF01641 SelR domain AVCG678_02965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG678_02970 PF00005 ABC transporter AVCG678_02970 PF02687 FtsX-like permease family AVCG678_02970 PF12704 MacB-like periplasmic core domain AVCG678_02990 PF02657 Fe-S metabolism associated domain AVCG678_03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_03000 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_03015 PF00873 AcrB/AcrD/AcrF family AVCG678_03085 PF00905 Penicillin binding protein transpeptidase domain AVCG678_03085 PF00912 Transglycosylase AVCG678_03090 PF03692 Putative zinc- or iron-chelating domain AVCG678_03105 PF00376 MerR family regulatory protein AVCG678_03105 PF09278 MerR, DNA binding AVCG678_03130 PF04860 Phage portal protein AVCG678_03225 PF00072 Response regulator receiver domain AVCG678_03225 PF00486 Transcriptional regulatory protein, C terminal AVCG678_03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_03235 PF16998 17 kDa outer membrane surface antigen AVCG678_03235 PF05433 Glycine zipper 2TM domain AVCG678_03245 PF03100 CcmE AVCG678_03250 PF01578 Cytochrome C assembly protein AVCG678_03250 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AVCG678_03255 PF03918 Cytochrome C biogenesis protein AVCG678_03265 PF13180 PDZ domain AVCG678_03270 PF00072 Response regulator receiver domain AVCG678_03270 PF00486 Transcriptional regulatory protein, C terminal AVCG678_03275 PF00672 HAMP domain AVCG678_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_03275 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_03280 PF08335 GlnD PII-uridylyltransferase AVCG678_03280 PF03710 Glutamate-ammonia ligase adenylyltransferase AVCG678_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_03285 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_03285 PF00989 PAS fold AVCG678_03290 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVCG678_03290 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVCG678_03290 PF01433 Peptidase family M1 domain AVCG678_03295 PF17202 Single cache domain 3 AVCG678_03295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_03295 PF00672 HAMP domain AVCG678_03330 PF00012 Hsp70 protein AVCG678_03340 PF00873 AcrB/AcrD/AcrF family AVCG678_03345 PF13533 Biotin-lipoyl like AVCG678_03360 PF01063 Amino-transferase class IV AVCG678_03380 PF00571 CBS domain AVCG678_03380 PF01769 Divalent cation transporter AVCG678_03380 PF03448 MgtE intracellular N domain AVCG678_03385 PF07690 Major Facilitator Superfamily AVCG678_03395 PF00781 Diacylglycerol kinase catalytic domain AVCG678_03400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_03400 PF00005 ABC transporter AVCG678_03405 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_03405 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_03410 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_03415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_03420 PF00120 Glutamine synthetase, catalytic domain AVCG678_03425 PF00202 Aminotransferase class-III AVCG678_03435 PF03551 Transcriptional regulator PadR-like family AVCG678_03440 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVCG678_03445 PF00535 Glycosyl transferase family 2 AVCG678_03455 PF01048 Phosphorylase superfamily AVCG678_03455 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AVCG678_03465 PF00043 Glutathione S-transferase, C-terminal domain AVCG678_03465 PF02798 Glutathione S-transferase, N-terminal domain AVCG678_03480 PF00155 Aminotransferase class I and II AVCG678_03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_03495 PF14759 Reductase C-terminal AVCG678_03500 PF02530 Porin subfamily AVCG678_03505 PF02530 Porin subfamily AVCG678_03520 PF01464 Transglycosylase SLT domain AVCG678_03520 PF14718 Soluble lytic murein transglycosylase L domain AVCG678_03525 PF00701 Dihydrodipicolinate synthetase family AVCG678_03530 PF01668 SmpB protein AVCG678_03540 PF02805 Metal binding domain of Ada AVCG678_03540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVCG678_03540 PF12833 Helix-turn-helix domain AVCG678_03540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVCG678_03545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_03545 PF00672 HAMP domain AVCG678_03545 PF02203 Tar ligand binding domain homologue AVCG678_03555 PF01192 RNA polymerase Rpb6 AVCG678_03560 PF13291 ACT domain AVCG678_03560 PF04607 Region found in RelA / SpoT proteins AVCG678_03560 PF02824 TGS domain AVCG678_03570 PF10502 Signal peptidase, peptidase S26 AVCG678_03575 PF00035 Double-stranded RNA binding motif AVCG678_03575 PF14622 Ribonuclease-III-like AVCG678_03580 PF01926 50S ribosome-binding GTPase AVCG678_03580 PF07650 KH domain AVCG678_03585 PF05145 Transition state regulatory protein AbrB AVCG678_03590 PF02565 Recombination protein O C terminal AVCG678_03590 PF11967 Recombination protein O N terminal AVCG678_03605 PF01966 HD domain AVCG678_03620 PF01966 HD domain AVCG678_03625 PF01571 Aminomethyltransferase folate-binding domain AVCG678_03645 PF00293 NUDIX domain AVCG678_03660 PF01066 CDP-alcohol phosphatidyltransferase AVCG678_03665 PF02666 Phosphatidylserine decarboxylase AVCG678_03670 PF00664 ABC transporter transmembrane region AVCG678_03670 PF00005 ABC transporter AVCG678_03675 PF04972 BON domain AVCG678_03675 PF01476 LysM domain AVCG678_03680 PF03641 Possible lysine decarboxylase AVCG678_03685 PF00892 EamA-like transporter family AVCG678_03690 PF08502 LeuA allosteric (dimerisation) domain AVCG678_03690 PF00682 HMGL-like AVCG678_03695 PF00561 alpha/beta hydrolase fold AVCG678_03715 PF01850 PIN domain AVCG678_03720 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AVCG678_03725 PF01406 tRNA synthetases class I (C) catalytic domain AVCG678_03730 PF00295 Glycosyl hydrolases family 28 AVCG678_03735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVCG678_03740 PF16363 GDP-mannose 4,6 dehydratase AVCG678_03745 PF04321 RmlD substrate binding domain AVCG678_03750 PF00483 Nucleotidyl transferase AVCG678_03755 PF00534 Glycosyl transferases group 1 AVCG678_03755 PF00535 Glycosyl transferase family 2 AVCG678_03765 PF00106 short chain dehydrogenase AVCG678_03770 PF13537 Glutamine amidotransferase domain AVCG678_03770 PF00156 Phosphoribosyl transferase domain AVCG678_03775 PF02674 Colicin V production protein AVCG678_03780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVCG678_03780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVCG678_03780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVCG678_03785 PF16363 GDP-mannose 4,6 dehydratase AVCG678_03790 PF16363 GDP-mannose 4,6 dehydratase AVCG678_03795 PF06745 KaiC AVCG678_03795 PF18073 Rubredoxin metal binding domain AVCG678_03800 PF00842 Alanine racemase, C-terminal domain AVCG678_03800 PF01168 Alanine racemase, N-terminal domain AVCG678_03805 PF12833 Helix-turn-helix domain AVCG678_03805 PF02311 AraC-like ligand binding domain AVCG678_03810 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_03815 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_03820 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_03825 PF00772 DnaB-like helicase N terminal domain AVCG678_03825 PF03796 DnaB-like helicase C terminal domain AVCG678_03830 PF01281 Ribosomal protein L9, N-terminal domain AVCG678_03830 PF03948 Ribosomal protein L9, C-terminal domain AVCG678_03840 PF01084 Ribosomal protein S18 AVCG678_03845 PF01250 Ribosomal protein S6 AVCG678_03855 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVCG678_03855 PF01447 Thermolysin metallopeptidase, catalytic domain AVCG678_03855 PF16485 Protealysin propeptide AVCG678_03865 PF00248 Aldo/keto reductase family AVCG678_03870 PF00698 Acyl transferase domain AVCG678_03880 PF00550 Phosphopantetheine attachment site AVCG678_03885 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_03885 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_03890 PF02618 YceG-like family AVCG678_03895 PF03755 YicC-like family, N-terminal region AVCG678_03895 PF08340 Domain of unknown function (DUF1732) AVCG678_03900 PF00625 Guanylate kinase AVCG678_03905 PF08242 Methyltransferase domain AVCG678_03910 PF00398 Ribosomal RNA adenine dimethylase AVCG678_03915 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVCG678_03930 PF04453 LPS transport system D AVCG678_03930 PF03968 OstA-like protein AVCG678_03945 PF01569 PAP2 superfamily AVCG678_03950 PF00883 Cytosol aminopeptidase family, catalytic domain AVCG678_03950 PF02789 Cytosol aminopeptidase family, N-terminal domain AVCG678_03960 PF00672 HAMP domain AVCG678_03960 PF02203 Tar ligand binding domain homologue AVCG678_03960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_03965 PF12848 ABC transporter AVCG678_03965 PF00005 ABC transporter AVCG678_03970 PF13417 Glutathione S-transferase, N-terminal domain AVCG678_03975 PF00334 Nucleoside diphosphate kinase AVCG678_03980 PF02391 MoaE protein AVCG678_03990 PF01066 CDP-alcohol phosphatidyltransferase AVCG678_03995 PF02151 UvrB/uvrC motif AVCG678_03995 PF12826 Helix-hairpin-helix motif AVCG678_03995 PF08459 UvrC Helix-hairpin-helix N-terminal AVCG678_03995 PF01541 GIY-YIG catalytic domain AVCG678_04005 PF13505 Outer membrane protein beta-barrel domain AVCG678_04010 PF13417 Glutathione S-transferase, N-terminal domain AVCG678_04010 PF00043 Glutathione S-transferase, C-terminal domain AVCG678_04015 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVCG678_04020 PF00384 Molybdopterin oxidoreductase AVCG678_04020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG678_04020 PF01568 Molydopterin dinucleotide binding domain AVCG678_04025 PF00293 NUDIX domain AVCG678_04030 PF04273 Putative phosphatase (DUF442) AVCG678_04030 PF00753 Metallo-beta-lactamase superfamily AVCG678_04040 PF04143 Sulphur transport AVCG678_04050 PF01925 Sulfite exporter TauE/SafE AVCG678_04055 PF00551 Formyl transferase AVCG678_04060 PF02769 AIR synthase related protein, C-terminal domain AVCG678_04060 PF00586 AIR synthase related protein, N-terminal domain AVCG678_04065 PF01594 AI-2E family transporter AVCG678_04075 PF13090 Polyphosphate kinase C-terminal domain 2 AVCG678_04075 PF13089 Polyphosphate kinase N-terminal domain AVCG678_04075 PF17941 Polyphosphate kinase C-terminal domain 1 AVCG678_04075 PF02503 Polyphosphate kinase middle domain AVCG678_04080 PF02541 Ppx/GppA phosphatase family AVCG678_04085 PF02742 Iron dependent repressor, metal binding and dimerisation domain AVCG678_04085 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG678_04090 PF01566 Natural resistance-associated macrophage protein AVCG678_04110 PF01612 3'-5' exonuclease AVCG678_04110 PF00570 HRDC domain AVCG678_04125 PF02938 GAD domain AVCG678_04125 PF01336 OB-fold nucleic acid binding domain AVCG678_04125 PF00152 tRNA synthetases class II (D, K and N) AVCG678_04140 PF00521 DNA gyrase/topoisomerase IV, subunit A AVCG678_04140 PF03989 DNA gyrase C-terminal domain, beta-propeller AVCG678_04145 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_04145 PF03707 Bacterial signalling protein N terminal repeat AVCG678_04145 PF13188 PAS domain AVCG678_04145 PF00563 EAL domain AVCG678_04155 PF00563 EAL domain AVCG678_04155 PF01590 GAF domain AVCG678_04155 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_04155 PF00989 PAS fold AVCG678_04160 PF04377 Arginine-tRNA-protein transferase, C terminus AVCG678_04160 PF04376 Arginine-tRNA-protein transferase, N terminus AVCG678_04170 PF00490 Delta-aminolevulinic acid dehydratase AVCG678_04190 PF00464 Serine hydroxymethyltransferase AVCG678_04195 PF03477 ATP cone domain AVCG678_04200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVCG678_04200 PF01872 RibD C-terminal domain AVCG678_04205 PF00677 Lumazine binding domain AVCG678_04215 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVCG678_04220 PF01029 NusB family AVCG678_04225 PF07690 Major Facilitator Superfamily AVCG678_04230 PF03030 Inorganic H+ pyrophosphatase AVCG678_04250 PF02504 Fatty acid synthesis protein AVCG678_04255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVCG678_04255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVCG678_04260 PF00216 Bacterial DNA-binding protein AVCG678_04265 PF13411 MerR HTH family regulatory protein AVCG678_04315 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVCG678_04315 PF01276 Orn/Lys/Arg decarboxylase, major domain AVCG678_04315 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVCG678_04330 PF00817 impB/mucB/samB family AVCG678_04330 PF11799 impB/mucB/samB family C-terminal domain AVCG678_04340 PF00753 Metallo-beta-lactamase superfamily AVCG678_04375 PF02397 Bacterial sugar transferase AVCG678_04390 PF02706 Chain length determinant protein AVCG678_04405 PF02628 Cytochrome oxidase assembly protein AVCG678_04410 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVCG678_04415 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AVCG678_04420 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVCG678_04425 PF00491 Arginase family AVCG678_04440 PF03992 Antibiotic biosynthesis monooxygenase AVCG678_04445 PF00380 Ribosomal protein S9/S16 AVCG678_04450 PF00572 Ribosomal protein L13 AVCG678_04455 PF13380 CoA binding domain AVCG678_04465 PF13380 CoA binding domain AVCG678_04470 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG678_04475 PF00149 Calcineurin-like phosphoesterase AVCG678_04475 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG678_04485 PF00067 Cytochrome P450 AVCG678_04490 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_04490 PF17151 Periplasmic sensor domain AVCG678_04495 PF00574 Clp protease AVCG678_04500 PF07724 AAA domain (Cdc48 subfamily) AVCG678_04500 PF06689 ClpX C4-type zinc finger AVCG678_04500 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG678_04505 PF05362 Lon protease (S16) C-terminal proteolytic domain AVCG678_04505 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_04505 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVCG678_04510 PF00216 Bacterial DNA-binding protein AVCG678_04525 PF01047 MarR family AVCG678_04530 PF13193 AMP-binding enzyme C-terminal domain AVCG678_04530 PF00501 AMP-binding enzyme AVCG678_04535 PF00378 Enoyl-CoA hydratase/isomerase AVCG678_04555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVCG678_04560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVCG678_04565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVCG678_04570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVCG678_04585 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVCG678_04585 PF10531 SLBB domain AVCG678_04585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVCG678_04590 PF00318 Ribosomal protein S2 AVCG678_04595 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVCG678_04595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVCG678_04595 PF00384 Molybdopterin oxidoreductase AVCG678_04600 PF00146 NADH dehydrogenase AVCG678_04605 PF12838 4Fe-4S dicluster domain AVCG678_04610 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVCG678_04615 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVCG678_04620 PF00361 Proton-conducting membrane transporter AVCG678_04620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG678_04625 PF00361 Proton-conducting membrane transporter AVCG678_04625 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVCG678_04630 PF00361 Proton-conducting membrane transporter AVCG678_04635 PF03309 Type III pantothenate kinase AVCG678_04635 PF02237 Biotin protein ligase C terminal domain AVCG678_04635 PF03099 Biotin/lipoate A/B protein ligase family AVCG678_04640 PF12706 Beta-lactamase superfamily domain AVCG678_04640 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVCG678_04640 PF17770 Ribonuclease J C-terminal domain AVCG678_04650 PF01042 Endoribonuclease L-PSP AVCG678_04665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVCG678_04665 PF03129 Anticodon binding domain AVCG678_04670 PF12704 MacB-like periplasmic core domain AVCG678_04670 PF02687 FtsX-like permease family AVCG678_04675 PF00005 ABC transporter AVCG678_04680 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVCG678_04680 PF14579 Helix-hairpin-helix motif AVCG678_04680 PF02811 PHP domain AVCG678_04680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVCG678_04690 PF00817 impB/mucB/samB family AVCG678_04690 PF11799 impB/mucB/samB family C-terminal domain AVCG678_04705 PF00072 Response regulator receiver domain AVCG678_04710 PF00072 Response regulator receiver domain AVCG678_04710 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_04715 PF00471 Ribosomal protein L33 AVCG678_04720 PF07690 Major Facilitator Superfamily AVCG678_04730 PF17876 Cold shock domain AVCG678_04730 PF08206 Ribonuclease B OB domain AVCG678_04730 PF00773 RNB domain AVCG678_04730 PF00575 S1 RNA binding domain AVCG678_04730 PF08461 Ribonuclease R winged-helix domain AVCG678_04735 PF01131 DNA topoisomerase AVCG678_04735 PF13368 Topoisomerase C-terminal repeat AVCG678_04735 PF01751 Toprim domain AVCG678_04735 PF01396 Topoisomerase DNA binding C4 zinc finger AVCG678_04745 PF02481 DNA recombination-mediator protein A AVCG678_04745 PF17782 DprA winged helix domain AVCG678_04750 PF02660 Glycerol-3-phosphate acyltransferase AVCG678_04755 PF01979 Amidohydrolase family AVCG678_04760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVCG678_04760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVCG678_04765 PF18158 Adaptive response protein AidB N-terminal domain AVCG678_04765 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_04765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_04770 PF00583 Acetyltransferase (GNAT) family AVCG678_04785 PF03652 Holliday junction resolvase AVCG678_04795 PF02686 Glu-tRNAGln amidotransferase C subunit AVCG678_04800 PF01425 Amidase AVCG678_04815 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVCG678_04820 PF07578 Lipid A Biosynthesis N-terminal domain AVCG678_04820 PF02684 Lipid-A-disaccharide synthetase AVCG678_04825 PF00535 Glycosyl transferase family 2 AVCG678_04830 PF02637 GatB domain AVCG678_04830 PF02934 GatB/GatE catalytic domain AVCG678_04850 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) AVCG678_04855 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVCG678_04860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_04860 PF02785 Biotin carboxylase C-terminal domain AVCG678_04860 PF00289 Biotin carboxylase, N-terminal domain AVCG678_04865 PF00364 Biotin-requiring enzyme AVCG678_04870 PF01220 Dehydroquinase class II AVCG678_04875 PF13462 Thioredoxin AVCG678_04880 PF00155 Aminotransferase class I and II AVCG678_04890 PF12111 Polyribonucleotide phosphorylase C terminal AVCG678_04890 PF10150 Ribonuclease E/G family AVCG678_04890 PF00575 S1 RNA binding domain AVCG678_04895 PF01520 N-acetylmuramoyl-L-alanine amidase AVCG678_04895 PF11741 AMIN domain AVCG678_04900 PF00905 Penicillin binding protein transpeptidase domain AVCG678_04900 PF00912 Transglycosylase AVCG678_04900 PF17092 Penicillin-binding protein OB-like domain AVCG678_04910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVCG678_04920 PF01513 ATP-NAD kinase AVCG678_04940 PF00588 SpoU rRNA Methylase family AVCG678_04940 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVCG678_04960 PF00009 Elongation factor Tu GTP binding domain AVCG678_04960 PF03144 Elongation factor Tu domain 2 AVCG678_04960 PF03143 Elongation factor Tu C-terminal domain AVCG678_04985 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVCG678_04990 PF02357 Transcription termination factor nusG AVCG678_04990 PF00467 KOW motif AVCG678_04995 PF00298 Ribosomal protein L11, RNA binding domain AVCG678_04995 PF03946 Ribosomal protein L11, N-terminal domain AVCG678_05000 PF00687 Ribosomal protein L1p/L10e family AVCG678_05005 PF00466 Ribosomal protein L10 AVCG678_05010 PF00542 Ribosomal protein L7/L12 C-terminal domain AVCG678_05010 PF16320 Ribosomal protein L7/L12 dimerisation domain AVCG678_05015 PF04563 RNA polymerase beta subunit AVCG678_05015 PF04560 RNA polymerase Rpb2, domain 7 AVCG678_05015 PF00562 RNA polymerase Rpb2, domain 6 AVCG678_05015 PF10385 RNA polymerase beta subunit external 1 domain AVCG678_05015 PF04565 RNA polymerase Rpb2, domain 3 AVCG678_05015 PF04561 RNA polymerase Rpb2, domain 2 AVCG678_05020 PF05000 RNA polymerase Rpb1, domain 4 AVCG678_05020 PF04998 RNA polymerase Rpb1, domain 5 AVCG678_05020 PF00623 RNA polymerase Rpb1, domain 2 AVCG678_05020 PF04983 RNA polymerase Rpb1, domain 3 AVCG678_05020 PF04997 RNA polymerase Rpb1, domain 1 AVCG678_05035 PF00164 Ribosomal protein S12/S23 AVCG678_05040 PF00177 Ribosomal protein S7p/S5e AVCG678_05045 PF03764 Elongation factor G, domain IV AVCG678_05045 PF00679 Elongation factor G C-terminus AVCG678_05045 PF03144 Elongation factor Tu domain 2 AVCG678_05045 PF14492 Elongation Factor G, domain II AVCG678_05045 PF00009 Elongation factor Tu GTP binding domain AVCG678_05050 PF03144 Elongation factor Tu domain 2 AVCG678_05050 PF03143 Elongation factor Tu C-terminal domain AVCG678_05050 PF00009 Elongation factor Tu GTP binding domain AVCG678_05055 PF00338 Ribosomal protein S10p/S20e AVCG678_05060 PF00297 Ribosomal protein L3 AVCG678_05065 PF00573 Ribosomal protein L4/L1 family AVCG678_05070 PF00276 Ribosomal protein L23 AVCG678_05075 PF03947 Ribosomal Proteins L2, C-terminal domain AVCG678_05075 PF00181 Ribosomal Proteins L2, RNA binding domain AVCG678_05080 PF00203 Ribosomal protein S19 AVCG678_05085 PF00237 Ribosomal protein L22p/L17e AVCG678_05090 PF00189 Ribosomal protein S3, C-terminal domain AVCG678_05090 PF07650 KH domain AVCG678_05095 PF00252 Ribosomal protein L16p/L10e AVCG678_05100 PF00831 Ribosomal L29 protein AVCG678_05105 PF00366 Ribosomal protein S17 AVCG678_05110 PF00238 Ribosomal protein L14p/L23e AVCG678_05115 PF00467 KOW motif AVCG678_05115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVCG678_05120 PF00281 Ribosomal protein L5 AVCG678_05120 PF00673 ribosomal L5P family C-terminus AVCG678_05125 PF00253 Ribosomal protein S14p/S29e AVCG678_05130 PF00410 Ribosomal protein S8 AVCG678_05135 PF00347 Ribosomal protein L6 AVCG678_05140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVCG678_05145 PF00333 Ribosomal protein S5, N-terminal domain AVCG678_05145 PF03719 Ribosomal protein S5, C-terminal domain AVCG678_05150 PF00327 Ribosomal protein L30p/L7e AVCG678_05155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVCG678_05160 PF00344 SecY translocase AVCG678_05165 PF05191 Adenylate kinase, active site lid AVCG678_05170 PF00416 Ribosomal protein S13/S18 AVCG678_05175 PF00411 Ribosomal protein S11 AVCG678_05180 PF01000 RNA polymerase Rpb3/RpoA insert domain AVCG678_05180 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVCG678_05180 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVCG678_05185 PF01196 Ribosomal protein L17 AVCG678_05200 PF00581 Rhodanese-like domain AVCG678_05205 PF02272 DHHA1 domain AVCG678_05205 PF01411 tRNA synthetases class II (A) AVCG678_05205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVCG678_05210 PF00291 Pyridoxal-phosphate dependent enzyme AVCG678_05215 PF03441 FAD binding domain of DNA photolyase AVCG678_05215 PF00875 DNA photolyase AVCG678_05225 PF01476 LysM domain AVCG678_05225 PF08525 Opacity-associated protein A N-terminal motif AVCG678_05225 PF01551 Peptidase family M23 AVCG678_05230 PF04305 Protein of unknown function (DUF455) AVCG678_05235 PF00578 AhpC/TSA family AVCG678_05250 PF00765 Autoinducer synthase AVCG678_05260 PF01515 Phosphate acetyl/butaryl transferase AVCG678_05260 PF00390 Malic enzyme, N-terminal domain AVCG678_05260 PF03949 Malic enzyme, NAD binding domain AVCG678_05270 PF02405 Permease MlaE AVCG678_05275 PF00005 ABC transporter AVCG678_05285 PF03886 ABC-type transport auxiliary lipoprotein component AVCG678_05285 PF02470 MlaD protein AVCG678_05290 PF00392 Bacterial regulatory proteins, gntR family AVCG678_05290 PF00155 Aminotransferase class I and II AVCG678_05315 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AVCG678_05320 PF01259 SAICAR synthetase AVCG678_05330 PF07519 Tannase and feruloyl esterase AVCG678_05335 PF07694 5TMR of 5TMR-LYT AVCG678_05335 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_05345 PF00180 Isocitrate/isopropylmalate dehydrogenase AVCG678_05350 PF00588 SpoU rRNA Methylase family AVCG678_05355 PF01177 Asp/Glu/Hydantoin racemase AVCG678_05365 PF00571 CBS domain AVCG678_05365 PF03471 Transporter associated domain AVCG678_05365 PF01595 Cyclin M transmembrane N-terminal domain AVCG678_05375 PF13472 GDSL-like Lipase/Acylhydrolase family AVCG678_05375 PF07859 alpha/beta hydrolase fold AVCG678_05380 PF07687 Peptidase dimerisation domain AVCG678_05380 PF01546 Peptidase family M20/M25/M40 AVCG678_05385 PF00484 Carbonic anhydrase AVCG678_05395 PF03741 Integral membrane protein TerC family AVCG678_05400 PF01479 S4 domain AVCG678_05400 PF00163 Ribosomal protein S4/S9 N-terminal domain AVCG678_05405 PF04960 Glutaminase AVCG678_05415 PF01171 PP-loop family AVCG678_05420 PF00459 Inositol monophosphatase family AVCG678_05425 PF00459 Inositol monophosphatase family AVCG678_05430 PF07690 Major Facilitator Superfamily AVCG678_05435 PF00462 Glutaredoxin AVCG678_05450 PF00586 AIR synthase related protein, N-terminal domain AVCG678_05450 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVCG678_05450 PF02769 AIR synthase related protein, C-terminal domain AVCG678_05455 PF00226 DnaJ domain AVCG678_05455 PF01556 DnaJ C terminal domain AVCG678_05470 PF03099 Biotin/lipoate A/B protein ligase family AVCG678_05535 PF00467 KOW motif AVCG678_05535 PF02357 Transcription termination factor nusG AVCG678_05535 PF18298 NusG additional domain AVCG678_05695 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_05695 PF12804 MobA-like NTP transferase domain AVCG678_05700 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_05720 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_05725 PF00535 Glycosyl transferase family 2 AVCG678_05725 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVCG678_05750 PF02654 Cobalamin-5-phosphate synthase AVCG678_05755 PF02277 Phosphoribosyltransferase AVCG678_05760 PF01219 Prokaryotic diacylglycerol kinase AVCG678_05785 PF01327 Polypeptide deformylase AVCG678_05790 PF00027 Cyclic nucleotide-binding domain AVCG678_05790 PF13545 Crp-like helix-turn-helix domain AVCG678_05800 PF04055 Radical SAM superfamily AVCG678_05805 PF00550 Phosphopantetheine attachment site AVCG678_05810 PF07977 FabA-like domain AVCG678_05815 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_05815 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_05820 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_05820 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_05825 PF00107 Zinc-binding dehydrogenase AVCG678_05825 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_05840 PF00795 Carbon-nitrogen hydrolase AVCG678_05840 PF02540 NAD synthase AVCG678_05845 PF07676 WD40-like Beta Propeller Repeat AVCG678_05850 PF00881 Nitroreductase family AVCG678_05860 PF00579 tRNA synthetases class I (W and Y) AVCG678_05865 PF03702 Anhydro-N-acetylmuramic acid kinase AVCG678_05885 PF00989 PAS fold AVCG678_05885 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_05895 PF03167 Uracil DNA glycosylase superfamily AVCG678_05900 PF13404 AsnC-type helix-turn-helix domain AVCG678_05900 PF01037 Lrp/AsnC ligand binding domain AVCG678_05905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVCG678_05905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG678_05910 PF00561 alpha/beta hydrolase fold AVCG678_05915 PF08241 Methyltransferase domain AVCG678_05920 PF06233 Usg-like family AVCG678_05925 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_05930 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_05935 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_05945 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AVCG678_05950 PF12804 MobA-like NTP transferase domain AVCG678_05960 PF06463 Molybdenum Cofactor Synthesis C AVCG678_05960 PF04055 Radical SAM superfamily AVCG678_05970 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_05970 PF17158 Membrane-associated sensor, integral membrane domain AVCG678_05975 PF05681 Fumarate hydratase (Fumerase) AVCG678_05975 PF05683 Fumarase C-terminus AVCG678_05985 PF10415 Fumarase C C-terminus AVCG678_05985 PF00206 Lyase AVCG678_05990 PF01471 Putative peptidoglycan binding domain AVCG678_05990 PF03734 L,D-transpeptidase catalytic domain AVCG678_05995 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_06000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVCG678_06010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG678_06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_06015 PF01474 Class-II DAHP synthetase family AVCG678_06030 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVCG678_06045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVCG678_06045 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVCG678_06055 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_06055 PF00360 Phytochrome region AVCG678_06055 PF01590 GAF domain AVCG678_06055 PF00563 EAL domain AVCG678_06060 PF17757 UvrB interaction domain AVCG678_06060 PF02151 UvrB/uvrC motif AVCG678_06060 PF04851 Type III restriction enzyme, res subunit AVCG678_06060 PF00271 Helicase conserved C-terminal domain AVCG678_06060 PF12344 Ultra-violet resistance protein B AVCG678_06070 PF01979 Amidohydrolase family AVCG678_06090 PF00793 DAHP synthetase I family AVCG678_06095 PF00113 Enolase, C-terminal TIM barrel domain AVCG678_06095 PF03952 Enolase, N-terminal domain AVCG678_06105 PF00676 Dehydrogenase E1 component AVCG678_06110 PF00364 Biotin-requiring enzyme AVCG678_06110 PF02779 Transketolase, pyrimidine binding domain AVCG678_06110 PF02780 Transketolase, C-terminal domain AVCG678_06115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVCG678_06115 PF02817 e3 binding domain AVCG678_06115 PF00364 Biotin-requiring enzyme AVCG678_06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_06130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG678_06140 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVCG678_06140 PF04055 Radical SAM superfamily AVCG678_06160 PF07690 Major Facilitator Superfamily AVCG678_06160 PF00083 Sugar (and other) transporter AVCG678_06165 PF03364 Polyketide cyclase / dehydrase and lipid transport AVCG678_06175 PF02464 Competence-damaged protein AVCG678_06175 PF18146 Damage-inducible protein CinA KH domain AVCG678_06175 PF00994 Probable molybdopterin binding domain AVCG678_06180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVCG678_06180 PF02542 YgbB family AVCG678_06185 PF01207 Dihydrouridine synthase (Dus) AVCG678_06190 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_06190 PF00989 PAS fold AVCG678_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_06195 PF02954 Bacterial regulatory protein, Fis family AVCG678_06195 PF00158 Sigma-54 interaction domain AVCG678_06195 PF00072 Response regulator receiver domain AVCG678_06200 PF00989 PAS fold AVCG678_06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_06200 PF00672 HAMP domain AVCG678_06200 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_06205 PF02954 Bacterial regulatory protein, Fis family AVCG678_06205 PF00072 Response regulator receiver domain AVCG678_06205 PF00158 Sigma-54 interaction domain AVCG678_06210 PF17209 Hfq protein AVCG678_06215 PF16360 GTP-binding GTPase Middle Region AVCG678_06215 PF13167 GTP-binding GTPase N-terminal AVCG678_06215 PF01926 50S ribosome-binding GTPase AVCG678_06225 PF03819 MazG nucleotide pyrophosphohydrolase domain AVCG678_06235 PF10414 Sirohaem synthase dimerisation region AVCG678_06235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_06255 PF00175 Oxidoreductase NAD-binding domain AVCG678_06255 PF00970 Oxidoreductase FAD-binding domain AVCG678_06265 PF03330 Lytic transglycolase AVCG678_06265 PF05036 Sporulation related domain AVCG678_06270 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG678_06270 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG678_06275 PF02223 Thymidylate kinase AVCG678_06280 PF09115 DNA polymerase III, delta subunit, C terminal AVCG678_06285 PF01925 Sulfite exporter TauE/SafE AVCG678_06290 PF08264 Anticodon-binding domain of tRNA AVCG678_06290 PF09334 tRNA synthetases class I (M) AVCG678_06295 PF01026 TatD related DNase AVCG678_06300 PF03099 Biotin/lipoate A/B protein ligase family AVCG678_06300 PF12706 Beta-lactamase superfamily domain AVCG678_06305 PF00654 Voltage gated chloride channel AVCG678_06315 PF02683 Cytochrome C biogenesis protein transmembrane region AVCG678_06320 PF01494 FAD binding domain AVCG678_06330 PF00005 ABC transporter AVCG678_06340 PF02653 Branched-chain amino acid transport system / permease component AVCG678_06345 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG678_06355 PF14602 Hexapeptide repeat of succinyl-transferase AVCG678_06355 PF12804 MobA-like NTP transferase domain AVCG678_06355 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_06360 PF01380 SIS domain AVCG678_06380 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_06385 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_06390 PF00005 ABC transporter AVCG678_06390 PF17912 MalK OB fold domain AVCG678_06400 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG678_06400 PF00480 ROK family AVCG678_06405 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG678_06405 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG678_06410 PF01297 Zinc-uptake complex component A periplasmic AVCG678_06415 PF00005 ABC transporter AVCG678_06420 PF00950 ABC 3 transport family AVCG678_06425 PF01475 Ferric uptake regulator family AVCG678_06430 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_06445 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG678_06445 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG678_06465 PF12951 Passenger-associated-transport-repeat AVCG678_06480 PF01734 Patatin-like phospholipase AVCG678_06485 PF01502 Phosphoribosyl-AMP cyclohydrolase AVCG678_06490 PF01227 GTP cyclohydrolase I AVCG678_06500 PF01809 Putative membrane protein insertion efficiency factor AVCG678_06505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVCG678_06505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVCG678_06505 PF03129 Anticodon binding domain AVCG678_06505 PF02824 TGS domain AVCG678_06520 PF02445 Quinolinate synthetase A protein AVCG678_06525 PF00890 FAD binding domain AVCG678_06525 PF02910 Fumarate reductase flavoprotein C-term AVCG678_06530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVCG678_06530 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVCG678_06565 PF00583 Acetyltransferase (GNAT) family AVCG678_06570 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG678_06570 PF00204 DNA gyrase B AVCG678_06570 PF01751 Toprim domain AVCG678_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_06580 PF00072 Response regulator receiver domain AVCG678_06580 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_06585 PF00121 Triosephosphate isomerase AVCG678_06590 PF03840 Preprotein translocase SecG subunit AVCG678_06595 PF06418 CTP synthase N-terminus AVCG678_06595 PF00117 Glutamine amidotransferase class-I AVCG678_06620 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_06630 PF00809 Pterin binding enzyme AVCG678_06640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVCG678_06660 PF02347 Glycine cleavage system P-protein AVCG678_06665 PF01597 Glycine cleavage H-protein AVCG678_06670 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG678_06670 PF01571 Aminomethyltransferase folate-binding domain AVCG678_06690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVCG678_06695 PF01479 S4 domain AVCG678_06695 PF00849 RNA pseudouridylate synthase AVCG678_06700 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_06715 PF00083 Sugar (and other) transporter AVCG678_06725 PF00460 Flagella basal body rod protein AVCG678_06725 PF07559 Flagellar basal body protein FlaE AVCG678_06725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG678_06730 PF04002 RadC-like JAB domain AVCG678_06735 PF00557 Metallopeptidase family M24 AVCG678_06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_06740 PF03466 LysR substrate binding domain AVCG678_06745 PF03601 Conserved hypothetical protein 698 AVCG678_06750 PF17746 SfsA N-terminal OB domain AVCG678_06750 PF03749 Sugar fermentation stimulation protein RE domain AVCG678_06755 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AVCG678_06765 PF00155 Aminotransferase class I and II AVCG678_06770 PF01842 ACT domain AVCG678_06770 PF00742 Homoserine dehydrogenase AVCG678_06770 PF03447 Homoserine dehydrogenase, NAD binding domain AVCG678_06775 PF17768 RecJ OB domain AVCG678_06775 PF02272 DHHA1 domain AVCG678_06775 PF01368 DHH family AVCG678_06800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG678_06805 PF00313 'Cold-shock' DNA-binding domain AVCG678_06860 PF00712 DNA polymerase III beta subunit, N-terminal domain AVCG678_06860 PF02768 DNA polymerase III beta subunit, C-terminal domain AVCG678_06860 PF02767 DNA polymerase III beta subunit, central domain AVCG678_06895 PF00436 Single-strand binding protein family AVCG678_07220 PF00271 Helicase conserved C-terminal domain AVCG678_07220 PF00270 DEAD/DEAH box helicase AVCG678_07220 PF17191 RecG wedge domain AVCG678_07230 PF00270 DEAD/DEAH box helicase AVCG678_07230 PF00271 Helicase conserved C-terminal domain AVCG678_07230 PF03461 TRCF domain AVCG678_07230 PF17757 UvrB interaction domain AVCG678_07230 PF02559 CarD-like/TRCF domain AVCG678_07235 PF01810 LysE type translocator AVCG678_07245 PF00892 EamA-like transporter family AVCG678_07255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_07275 PF00120 Glutamine synthetase, catalytic domain AVCG678_07275 PF03951 Glutamine synthetase, beta-Grasp domain AVCG678_07280 PF00543 Nitrogen regulatory protein P-II AVCG678_07285 PF01256 Carbohydrate kinase AVCG678_07285 PF03853 YjeF-related protein N-terminus AVCG678_07300 PF17755 UvrA DNA-binding domain AVCG678_07300 PF17760 UvrA interaction domain AVCG678_07305 PF00436 Single-strand binding protein family AVCG678_07315 PF01914 MarC family integral membrane protein AVCG678_07320 PF00521 DNA gyrase/topoisomerase IV, subunit A AVCG678_07320 PF03989 DNA gyrase C-terminal domain, beta-propeller AVCG678_07325 PF00403 Heavy-metal-associated domain AVCG678_07330 PF13746 4Fe-4S dicluster domain AVCG678_07330 PF12801 4Fe-4S binding domain AVCG678_07330 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVCG678_07335 PF05751 FixH AVCG678_07345 PF03597 Cytochrome oxidase maturation protein cbb3-type AVCG678_07350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVCG678_07350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG678_07355 PF12706 Beta-lactamase superfamily domain AVCG678_07365 PF01547 Bacterial extracellular solute-binding protein AVCG678_07370 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_07375 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_07380 PF17912 MalK OB fold domain AVCG678_07380 PF00005 ABC transporter AVCG678_07400 PF00248 Aldo/keto reductase family AVCG678_07405 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AVCG678_07405 PF04616 Glycosyl hydrolases family 43 AVCG678_07420 PF01794 Ferric reductase like transmembrane component AVCG678_07425 PF00174 Oxidoreductase molybdopterin binding domain AVCG678_07430 PF00920 Dehydratase family AVCG678_07445 PF01810 LysE type translocator AVCG678_07450 PF10397 Adenylosuccinate lyase C-terminus AVCG678_07450 PF00206 Lyase AVCG678_07460 PF00834 Ribulose-phosphate 3 epimerase family AVCG678_07465 PF00106 short chain dehydrogenase AVCG678_07475 PF01613 Flavin reductase like domain AVCG678_07485 PF00264 Common central domain of tyrosinase AVCG678_07500 PF00271 Helicase conserved C-terminal domain AVCG678_07500 PF00270 DEAD/DEAH box helicase AVCG678_07505 PF01810 LysE type translocator AVCG678_07510 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AVCG678_07515 PF00266 Aminotransferase class-V AVCG678_07520 PF01458 Uncharacterized protein family (UPF0051) AVCG678_07525 PF00005 ABC transporter AVCG678_07530 PF01458 Uncharacterized protein family (UPF0051) AVCG678_07535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG678_07540 PF00266 Aminotransferase class-V AVCG678_07545 PF01883 Iron-sulfur cluster assembly protein AVCG678_07550 PF01521 Iron-sulphur cluster biosynthesis AVCG678_07560 PF01467 Cytidylyltransferase-like AVCG678_07565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVCG678_07570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVCG678_07575 PF02547 Queuosine biosynthesis protein AVCG678_07580 PF01702 Queuine tRNA-ribosyltransferase AVCG678_07590 PF00149 Calcineurin-like phosphoesterase AVCG678_07600 PF13478 XdhC Rossmann domain AVCG678_07600 PF02625 XdhC and CoxI family AVCG678_07605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG678_07605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG678_07610 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVCG678_07610 PF00941 FAD binding domain in molybdopterin dehydrogenase AVCG678_07615 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_07615 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG678_07615 PF01799 [2Fe-2S] binding domain AVCG678_07620 PF00440 Bacterial regulatory proteins, tetR family AVCG678_07630 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_07630 PF13188 PAS domain AVCG678_07630 PF08448 PAS fold AVCG678_07630 PF00072 Response regulator receiver domain AVCG678_07640 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVCG678_07650 PF04317 YcjX-like family, DUF463 AVCG678_07655 PF05128 Domain of unknown function (DUF697) AVCG678_07665 PF00491 Arginase family AVCG678_07670 PF00155 Aminotransferase class I and II AVCG678_07675 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_07675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG678_07680 PF12706 Beta-lactamase superfamily domain AVCG678_07685 PF05697 Bacterial trigger factor protein (TF) AVCG678_07685 PF05698 Bacterial trigger factor protein (TF) C-terminus AVCG678_07685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVCG678_07715 PF12002 MgsA AAA+ ATPase C terminal AVCG678_07715 PF16193 AAA C-terminal domain AVCG678_07715 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_07720 PF13180 PDZ domain AVCG678_07720 PF00595 PDZ domain AVCG678_07735 PF17763 Glutaminase/Asparaginase C-terminal domain AVCG678_07735 PF00710 Asparaginase, N-terminal AVCG678_07745 PF02872 5'-nucleotidase, C-terminal domain AVCG678_07745 PF00149 Calcineurin-like phosphoesterase AVCG678_07755 PF00535 Glycosyl transferase family 2 AVCG678_07760 PF00291 Pyridoxal-phosphate dependent enzyme AVCG678_07760 PF00585 C-terminal regulatory domain of Threonine dehydratase AVCG678_07770 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_07775 PF00005 ABC transporter AVCG678_07780 PF09347 Domain of unknown function (DUF1989) AVCG678_07790 PF00289 Biotin carboxylase, N-terminal domain AVCG678_07790 PF02785 Biotin carboxylase C-terminal domain AVCG678_07790 PF18140 Propionyl-coenzyme A carboxylase BT domain AVCG678_07790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_07790 PF00364 Biotin-requiring enzyme AVCG678_07810 PF00107 Zinc-binding dehydrogenase AVCG678_07810 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_07815 PF13673 Acetyltransferase (GNAT) domain AVCG678_07820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AVCG678_07830 PF00756 Putative esterase AVCG678_07835 PF02684 Lipid-A-disaccharide synthetase AVCG678_07845 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_07845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVCG678_07850 PF07977 FabA-like domain AVCG678_07855 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_07855 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVCG678_07860 PF07244 Surface antigen variable number repeat AVCG678_07860 PF01103 Surface antigen AVCG678_07865 PF02163 Peptidase family M50 AVCG678_07865 PF17820 PDZ domain AVCG678_07875 PF01255 Putative undecaprenyl diphosphate synthase AVCG678_07880 PF01765 Ribosome recycling factor AVCG678_07885 PF00696 Amino acid kinase family AVCG678_07890 PF00889 Elongation factor TS AVCG678_07895 PF00318 Ribosomal protein S2 AVCG678_07920 PF01230 HIT domain AVCG678_07935 PF17871 AAA lid domain AVCG678_07935 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_07935 PF07724 AAA domain (Cdc48 subfamily) AVCG678_07935 PF02861 Clp amino terminal domain, pathogenicity island component AVCG678_07935 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG678_07940 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVCG678_07955 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_07955 PF06426 Serine acetyltransferase, N-terminal AVCG678_07965 PF00561 alpha/beta hydrolase fold AVCG678_07980 PF01494 FAD binding domain AVCG678_07985 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG678_07990 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_07995 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_08000 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_08005 PF00005 ABC transporter AVCG678_08010 PF01425 Amidase AVCG678_08015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVCG678_08015 PF01411 tRNA synthetases class II (A) AVCG678_08015 PF02272 DHHA1 domain AVCG678_08020 PF00154 recA bacterial DNA recombination protein AVCG678_08030 PF04227 Indigoidine synthase A like protein AVCG678_08035 PF01726 LexA DNA binding domain AVCG678_08035 PF00717 Peptidase S24-like AVCG678_08040 PF00753 Metallo-beta-lactamase superfamily AVCG678_08040 PF03772 Competence protein AVCG678_08045 PF00285 Citrate synthase, C-terminal domain AVCG678_08055 PF00591 Glycosyl transferase family, a/b domain AVCG678_08055 PF02885 Glycosyl transferase family, helical bundle domain AVCG678_08060 PF00218 Indole-3-glycerol phosphate synthase AVCG678_08065 PF01967 MoaC family AVCG678_08070 PF00994 Probable molybdopterin binding domain AVCG678_08070 PF03454 MoeA C-terminal region (domain IV) AVCG678_08070 PF03453 MoeA N-terminal region (domain I and II) AVCG678_08075 PF01569 PAP2 superfamily AVCG678_08080 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVCG678_08090 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_08095 PF00005 ABC transporter AVCG678_08095 PF00571 CBS domain AVCG678_08115 PF09992 Phosphodiester glycosidase AVCG678_08130 PF00551 Formyl transferase AVCG678_08135 PF00067 Cytochrome P450 AVCG678_08140 PF03466 LysR substrate binding domain AVCG678_08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_08155 PF01965 DJ-1/PfpI family AVCG678_08155 PF12833 Helix-turn-helix domain AVCG678_08175 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_08180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVCG678_08195 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AVCG678_08195 PF02867 Ribonucleotide reductase, barrel domain AVCG678_08205 PF00672 HAMP domain AVCG678_08205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_08215 PF00156 Phosphoribosyl transferase domain AVCG678_08225 PF00994 Probable molybdopterin binding domain AVCG678_08225 PF02464 Competence-damaged protein AVCG678_08225 PF18146 Damage-inducible protein CinA KH domain AVCG678_08230 PF00672 HAMP domain AVCG678_08230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_08240 PF01584 CheW-like domain AVCG678_08250 PF03315 Serine dehydratase beta chain AVCG678_08250 PF03313 Serine dehydratase alpha chain AVCG678_08270 PF00376 MerR family regulatory protein AVCG678_08270 PF09278 MerR, DNA binding AVCG678_08275 PF03448 MgtE intracellular N domain AVCG678_08275 PF01769 Divalent cation transporter AVCG678_08275 PF00571 CBS domain AVCG678_08280 PF03358 NADPH-dependent FMN reductase AVCG678_08285 PF03186 CobD/Cbib protein AVCG678_08290 PF00155 Aminotransferase class I and II AVCG678_08295 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVCG678_08295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVCG678_08300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_08305 PF01888 CbiD AVCG678_08310 PF02571 Precorrin-6x reductase CbiJ/CobK AVCG678_08315 PF03975 CheD chemotactic sensory transduction AVCG678_08325 PF01156 Inosine-uridine preferring nucleoside hydrolase AVCG678_08330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_08335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_08340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_08345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_08350 PF02570 Precorrin-8X methylmutase AVCG678_08355 PF01903 CbiX AVCG678_08360 PF01925 Sulfite exporter TauE/SafE AVCG678_08365 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AVCG678_08375 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AVCG678_08380 PF02514 CobN/Magnesium Chelatase AVCG678_08385 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG678_08385 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG678_08390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AVCG678_08410 PF01134 Glucose inhibited division protein A AVCG678_08430 PF07549 SecD/SecF GG Motif AVCG678_08430 PF02355 Protein export membrane protein AVCG678_08435 PF02699 Preprotein translocase subunit AVCG678_08445 PF01551 Peptidase family M23 AVCG678_08445 PF01476 LysM domain AVCG678_08455 PF01975 Survival protein SurE AVCG678_08460 PF02403 Seryl-tRNA synthetase N-terminal domain AVCG678_08460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVCG678_08465 PF00902 Sec-independent protein translocase protein (TatC) AVCG678_08470 PF02416 mttA/Hcf106 family AVCG678_08475 PF02416 mttA/Hcf106 family AVCG678_08480 PF04079 Segregation and condensation complex subunit ScpB AVCG678_08485 PF02616 Segregation and condensation protein ScpA AVCG678_08490 PF00933 Glycosyl hydrolase family 3 N terminal domain AVCG678_08500 PF03485 Arginyl tRNA synthetase N terminal domain AVCG678_08500 PF00750 tRNA synthetases class I (R) AVCG678_08500 PF05746 DALR anticodon binding domain AVCG678_08505 PF01966 HD domain AVCG678_08505 PF13286 Phosphohydrolase-associated domain AVCG678_08510 PF01521 Iron-sulphur cluster biosynthesis AVCG678_08520 PF08238 Sel1 repeat AVCG678_08530 PF08264 Anticodon-binding domain of tRNA AVCG678_08530 PF00133 tRNA synthetases class I (I, L, M and V) AVCG678_08530 PF10458 Valyl tRNA synthetase tRNA binding arm AVCG678_08540 PF02321 Outer membrane efflux protein AVCG678_08560 PF00459 Inositol monophosphatase family AVCG678_08565 PF03009 Glycerophosphoryl diester phosphodiesterase family AVCG678_08570 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_08570 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_08575 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_08580 PF00005 ABC transporter AVCG678_08580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_08585 PF00005 ABC transporter AVCG678_08585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_08590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_08595 PF00455 DeoR C terminal sensor domain AVCG678_08595 PF08220 DeoR-like helix-turn-helix domain AVCG678_08605 PF01965 DJ-1/PfpI family AVCG678_08750 PF03796 DnaB-like helicase C terminal domain AVCG678_08750 PF00772 DnaB-like helicase N terminal domain AVCG678_08750 PF14528 LAGLIDADG-like domain AVCG678_08830 PF01061 ABC-2 type transporter AVCG678_08835 PF00005 ABC transporter AVCG678_08840 PF00072 Response regulator receiver domain AVCG678_08845 PF01266 FAD dependent oxidoreductase AVCG678_08845 PF16350 FAD dependent oxidoreductase central domain AVCG678_08845 PF01571 Aminomethyltransferase folate-binding domain AVCG678_08845 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG678_08855 PF08241 Methyltransferase domain AVCG678_08860 PF00924 Mechanosensitive ion channel AVCG678_08860 PF12795 Mechanosensitive ion channel porin domain AVCG678_08860 PF12794 Mechanosensitive ion channel inner membrane domain 1 AVCG678_08880 PF01497 Periplasmic binding protein AVCG678_08885 PF01032 FecCD transport family AVCG678_08890 PF00005 ABC transporter AVCG678_08915 PF00270 DEAD/DEAH box helicase AVCG678_08915 PF00271 Helicase conserved C-terminal domain AVCG678_08915 PF08494 DEAD/H associated AVCG678_08930 PF01037 Lrp/AsnC ligand binding domain AVCG678_08940 PF00202 Aminotransferase class-III AVCG678_08950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG678_08950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG678_08960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVCG678_08960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVCG678_08965 PF00698 Acyl transferase domain AVCG678_08965 PF00668 Condensation domain AVCG678_08965 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_08965 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_08965 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_08965 PF00550 Phosphopantetheine attachment site AVCG678_08975 PF01266 FAD dependent oxidoreductase AVCG678_08975 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVCG678_08990 PF00459 Inositol monophosphatase family AVCG678_09005 PF07756 Protein of unknown function (DUF1612) AVCG678_09005 PF11972 HTH DNA binding domain AVCG678_09040 PF02567 Phenazine biosynthesis-like protein AVCG678_09050 PF13426 PAS domain AVCG678_09050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_09050 PF08447 PAS fold AVCG678_09060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVCG678_09060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVCG678_09105 PF03466 LysR substrate binding domain AVCG678_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_09110 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_09110 PF17866 AAA lid domain AVCG678_09130 PF17862 AAA+ lid domain AVCG678_09130 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_09130 PF01434 Peptidase family M41 AVCG678_09175 PF01625 Peptide methionine sulfoxide reductase AVCG678_09190 PF01037 Lrp/AsnC ligand binding domain AVCG678_09195 PF01177 Asp/Glu/Hydantoin racemase AVCG678_09200 PF00440 Bacterial regulatory proteins, tetR family AVCG678_09205 PF07690 Major Facilitator Superfamily AVCG678_09210 PF08447 PAS fold AVCG678_09210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_09210 PF13426 PAS domain AVCG678_09215 PF01638 HxlR-like helix-turn-helix AVCG678_09225 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVCG678_09235 PF13411 MerR HTH family regulatory protein AVCG678_09235 PF07739 TipAS antibiotic-recognition domain AVCG678_09240 PF14490 Helix-hairpin-helix containing domain AVCG678_09240 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AVCG678_09240 PF13538 UvrD-like helicase C-terminal domain AVCG678_09255 PF00248 Aldo/keto reductase family AVCG678_09265 PF10369 Small subunit of acetolactate synthase AVCG678_09270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVCG678_09270 PF00205 Thiamine pyrophosphate enzyme, central domain AVCG678_09270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVCG678_09300 PF13302 Acetyltransferase (GNAT) domain AVCG678_09305 PF13180 PDZ domain AVCG678_09310 PF01145 SPFH domain / Band 7 family AVCG678_09315 PF01145 SPFH domain / Band 7 family AVCG678_09320 PF00186 Dihydrofolate reductase AVCG678_09325 PF07681 DoxX AVCG678_09330 PF00303 Thymidylate synthase AVCG678_09365 PF02913 FAD linked oxidases, C-terminal domain AVCG678_09365 PF01565 FAD binding domain AVCG678_09370 PF00005 ABC transporter AVCG678_09375 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_09380 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_09385 PF12849 PBP superfamily domain AVCG678_09390 PF00580 UvrD/REP helicase N-terminal domain AVCG678_09390 PF13361 UvrD-like helicase C-terminal domain AVCG678_09405 PF01011 PQQ enzyme repeat AVCG678_09410 PF00857 Isochorismatase family AVCG678_09415 PF02569 Pantoate-beta-alanine ligase AVCG678_09420 PF02548 Ketopantoate hydroxymethyltransferase AVCG678_09430 PF00890 FAD binding domain AVCG678_09430 PF02910 Fumarate reductase flavoprotein C-term AVCG678_09455 PF01321 Creatinase/Prolidase N-terminal domain AVCG678_09455 PF00557 Metallopeptidase family M24 AVCG678_09470 PF02630 SCO1/SenC AVCG678_09475 PF00672 HAMP domain AVCG678_09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_09480 PF01584 CheW-like domain AVCG678_09495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVCG678_09495 PF00929 Exonuclease AVCG678_09495 PF11490 DNA polymerase III polC-type N-terminus II AVCG678_09495 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVCG678_09495 PF02811 PHP domain AVCG678_09495 PF14579 Helix-hairpin-helix motif AVCG678_09505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_09505 PF02203 Tar ligand binding domain homologue AVCG678_09505 PF00672 HAMP domain AVCG678_09510 PF00583 Acetyltransferase (GNAT) family AVCG678_09515 PF00270 DEAD/DEAH box helicase AVCG678_09515 PF00271 Helicase conserved C-terminal domain AVCG678_09525 PF01593 Flavin containing amine oxidoreductase AVCG678_09540 PF12826 Helix-hairpin-helix motif AVCG678_09540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVCG678_09540 PF03120 NAD-dependent DNA ligase OB-fold domain AVCG678_09540 PF01653 NAD-dependent DNA ligase adenylation domain AVCG678_09540 PF00533 BRCA1 C Terminus (BRCT) domain AVCG678_09550 PF13091 PLD-like domain AVCG678_09550 PF13396 Phospholipase_D-nuclease N-terminal AVCG678_09555 PF02463 RecF/RecN/SMC N terminal domain AVCG678_09560 PF13525 Outer membrane lipoprotein AVCG678_09565 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVCG678_09570 PF12327 FtsZ family, C-terminal domain AVCG678_09570 PF00091 Tubulin/FtsZ family, GTPase domain AVCG678_09575 PF02491 SHS2 domain inserted in FTSA AVCG678_09580 PF03799 Cell division protein FtsQ AVCG678_09580 PF08478 POTRA domain, FtsQ-type AVCG678_09585 PF07478 D-ala D-ala ligase C-terminus AVCG678_09585 PF01820 D-ala D-ala ligase N-terminus AVCG678_09590 PF07690 Major Facilitator Superfamily AVCG678_09590 PF00083 Sugar (and other) transporter AVCG678_09595 PF01565 FAD binding domain AVCG678_09595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVCG678_09600 PF08245 Mur ligase middle domain AVCG678_09600 PF01225 Mur ligase family, catalytic domain AVCG678_09600 PF02875 Mur ligase family, glutamate ligase domain AVCG678_09605 PF04101 Glycosyltransferase family 28 C-terminal domain AVCG678_09605 PF03033 Glycosyltransferase family 28 N-terminal domain AVCG678_09610 PF01098 Cell cycle protein AVCG678_09625 PF00953 Glycosyl transferase family 4 AVCG678_09625 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVCG678_09630 PF01225 Mur ligase family, catalytic domain AVCG678_09630 PF02875 Mur ligase family, glutamate ligase domain AVCG678_09630 PF08245 Mur ligase middle domain AVCG678_09635 PF08245 Mur ligase middle domain AVCG678_09635 PF02875 Mur ligase family, glutamate ligase domain AVCG678_09635 PF01225 Mur ligase family, catalytic domain AVCG678_09640 PF00905 Penicillin binding protein transpeptidase domain AVCG678_09640 PF03717 Penicillin-binding Protein dimerisation domain AVCG678_09650 PF01795 MraW methylase family AVCG678_09655 PF02381 MraZ protein, putative antitoxin-like AVCG678_09675 PF01510 N-acetylmuramoyl-L-alanine amidase AVCG678_09680 PF05099 Tellurite resistance protein TerB AVCG678_09680 PF00226 DnaJ domain AVCG678_09685 PF00365 Phosphofructokinase AVCG678_09715 PF01183 Glycosyl hydrolases family 25 AVCG678_09730 PF12833 Helix-turn-helix domain AVCG678_09730 PF01965 DJ-1/PfpI family AVCG678_09735 PF02219 Methylenetetrahydrofolate reductase AVCG678_09740 PF01209 ubiE/COQ5 methyltransferase family AVCG678_09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_09745 PF00672 HAMP domain AVCG678_09745 PF02743 Cache domain AVCG678_09750 PF00672 HAMP domain AVCG678_09750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_09755 PF12848 ABC transporter AVCG678_09755 PF00005 ABC transporter AVCG678_09760 PF00445 Ribonuclease T2 family AVCG678_09765 PF12146 Serine aminopeptidase, S33 AVCG678_09775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVCG678_09775 PF00205 Thiamine pyrophosphate enzyme, central domain AVCG678_09775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVCG678_09790 PF01042 Endoribonuclease L-PSP AVCG678_09805 PF01476 LysM domain AVCG678_09805 PF03734 L,D-transpeptidase catalytic domain AVCG678_09810 PF07015 VirC1 protein AVCG678_09815 PF00465 Iron-containing alcohol dehydrogenase AVCG678_09830 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_09835 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_09840 PF00005 ABC transporter AVCG678_09840 PF08402 TOBE domain AVCG678_09845 PF08447 PAS fold AVCG678_09845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_09845 PF13426 PAS domain AVCG678_09855 PF00155 Aminotransferase class I and II AVCG678_09860 PF03472 Autoinducer binding domain AVCG678_09860 PF00196 Bacterial regulatory proteins, luxR family AVCG678_09865 PF01381 Helix-turn-helix AVCG678_09880 PF00376 MerR family regulatory protein AVCG678_09880 PF09278 MerR, DNA binding AVCG678_09895 PF02310 B12 binding domain AVCG678_09895 PF02607 B12 binding domain AVCG678_09895 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVCG678_09895 PF00809 Pterin binding enzyme AVCG678_09895 PF02574 Homocysteine S-methyltransferase AVCG678_09915 PF00565 Staphylococcal nuclease homologue AVCG678_09925 PF00155 Aminotransferase class I and II AVCG678_09925 PF00392 Bacterial regulatory proteins, gntR family AVCG678_09930 PF00892 EamA-like transporter family AVCG678_09935 PF13505 Outer membrane protein beta-barrel domain AVCG678_09940 PF04402 Protein of unknown function (DUF541) AVCG678_09965 PF00313 'Cold-shock' DNA-binding domain AVCG678_09975 PF03275 UDP-galactopyranose mutase AVCG678_10000 PF01894 Uncharacterised protein family UPF0047 AVCG678_10005 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_10005 PF00563 EAL domain AVCG678_10005 PF13185 GAF domain AVCG678_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_10015 PF03466 LysR substrate binding domain AVCG678_10020 PF01810 LysE type translocator AVCG678_10030 PF07687 Peptidase dimerisation domain AVCG678_10030 PF01546 Peptidase family M20/M25/M40 AVCG678_10050 PF04545 Sigma-70, region 4 AVCG678_10050 PF04542 Sigma-70 region 2 AVCG678_10050 PF04539 Sigma-70 region 3 AVCG678_10050 PF03979 Sigma-70 factor, region 1.1 AVCG678_10050 PF04546 Sigma-70, non-essential region AVCG678_10050 PF00140 Sigma-70 factor, region 1.2 AVCG678_10055 PF01807 CHC2 zinc finger AVCG678_10055 PF10410 DnaB-helicase binding domain of primase AVCG678_10055 PF08278 DNA primase DnaG DnaB-binding AVCG678_10055 PF08275 DNA primase catalytic core, N-terminal domain AVCG678_10060 PF02632 BioY family AVCG678_10065 PF06968 Biotin and Thiamin Synthesis associated domain AVCG678_10065 PF04055 Radical SAM superfamily AVCG678_10075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVCG678_10075 PF00117 Glutamine amidotransferase class-I AVCG678_10080 PF01554 MatE AVCG678_10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_10085 PF03466 LysR substrate binding domain AVCG678_10090 PF00248 Aldo/keto reductase family AVCG678_10095 PF04228 Putative neutral zinc metallopeptidase AVCG678_10110 PF02142 MGS-like domain AVCG678_10110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_10110 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVCG678_10120 PF03449 Transcription elongation factor, N-terminal AVCG678_10120 PF01272 Transcription elongation factor, GreA/GreB, C-term AVCG678_10125 PF00534 Glycosyl transferases group 1 AVCG678_10155 PF01037 Lrp/AsnC ligand binding domain AVCG678_10160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_10165 PF03466 LysR substrate binding domain AVCG678_10165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_10175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVCG678_10185 PF03466 LysR substrate binding domain AVCG678_10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_10195 PF01699 Sodium/calcium exchanger protein AVCG678_10205 PF00155 Aminotransferase class I and II AVCG678_10225 PF00313 'Cold-shock' DNA-binding domain AVCG678_10230 PF00753 Metallo-beta-lactamase superfamily AVCG678_10240 PF12802 MarR family AVCG678_10245 PF00072 Response regulator receiver domain AVCG678_10245 PF00486 Transcriptional regulatory protein, C terminal AVCG678_10250 PF00672 HAMP domain AVCG678_10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_10250 PF16527 Two-component sensor protein CpxA, periplasmic domain AVCG678_10250 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_10255 PF01588 Putative tRNA binding domain AVCG678_10260 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVCG678_10260 PF03807 NADP oxidoreductase coenzyme F420-dependent AVCG678_10275 PF01790 Prolipoprotein diacylglyceryl transferase AVCG678_10285 PF02578 Multi-copper polyphenol oxidoreductase laccase AVCG678_10290 PF05195 Aminopeptidase P, N-terminal domain AVCG678_10290 PF00557 Metallopeptidase family M24 AVCG678_10305 PF14572 Phosphoribosyl synthetase-associated domain AVCG678_10305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVCG678_10320 PF00171 Aldehyde dehydrogenase family AVCG678_10325 PF02954 Bacterial regulatory protein, Fis family AVCG678_10325 PF13426 PAS domain AVCG678_10325 PF00158 Sigma-54 interaction domain AVCG678_10330 PF01386 Ribosomal L25p family AVCG678_10330 PF14693 Ribosomal protein TL5, C-terminal domain AVCG678_10335 PF00563 EAL domain AVCG678_10335 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_10335 PF03707 Bacterial signalling protein N terminal repeat AVCG678_10345 PF01195 Peptidyl-tRNA hydrolase AVCG678_10360 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVCG678_10365 PF06071 Protein of unknown function (DUF933) AVCG678_10365 PF01926 50S ribosome-binding GTPase AVCG678_10385 PF00255 Glutathione peroxidase AVCG678_10390 PF12833 Helix-turn-helix domain AVCG678_10390 PF14525 AraC-binding-like domain AVCG678_10400 PF00156 Phosphoribosyl transferase domain AVCG678_10405 PF00033 Cytochrome b/b6/petB AVCG678_10405 PF02167 Cytochrome C1 family AVCG678_10405 PF00032 Cytochrome b(C-terminal)/b6/petD AVCG678_10410 PF00033 Cytochrome b/b6/petB AVCG678_10410 PF00032 Cytochrome b(C-terminal)/b6/petD AVCG678_10415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVCG678_10415 PF00355 Rieske [2Fe-2S] domain AVCG678_10435 PF09857 Putative toxin of bacterial toxin-antitoxin pair AVCG678_10440 PF00664 ABC transporter transmembrane region AVCG678_10440 PF00005 ABC transporter AVCG678_10445 PF00664 ABC transporter transmembrane region AVCG678_10445 PF00005 ABC transporter AVCG678_10450 PF00588 SpoU rRNA Methylase family AVCG678_10460 PF00700 Bacterial flagellin C-terminal helical region AVCG678_10460 PF00669 Bacterial flagellin N-terminal helical region AVCG678_10470 PF01218 Coproporphyrinogen III oxidase AVCG678_10485 PF01743 Poly A polymerase head domain AVCG678_10485 PF12627 Probable RNA and SrmB- binding site of polymerase A AVCG678_10485 PF13735 tRNA nucleotidyltransferase domain 2 putative AVCG678_10490 PF00293 NUDIX domain AVCG678_10500 PF17863 AAA lid domain AVCG678_10500 PF07726 ATPase family associated with various cellular activities (AAA) AVCG678_10525 PF00583 Acetyltransferase (GNAT) family AVCG678_10550 PF13409 Glutathione S-transferase, N-terminal domain AVCG678_10555 PF13344 Haloacid dehalogenase-like hydrolase AVCG678_10555 PF00293 NUDIX domain AVCG678_10565 PF00574 Clp protease AVCG678_10570 PF03594 Benzoate membrane transport protein AVCG678_10575 PF08502 LeuA allosteric (dimerisation) domain AVCG678_10575 PF00682 HMGL-like AVCG678_10590 PF13404 AsnC-type helix-turn-helix domain AVCG678_10590 PF01037 Lrp/AsnC ligand binding domain AVCG678_10605 PF04717 Type VI secretion system, phage-baseplate injector AVCG678_10630 PF04715 Anthranilate synthase component I, N terminal region AVCG678_10630 PF00425 chorismate binding enzyme AVCG678_10630 PF00117 Glutamine amidotransferase class-I AVCG678_10640 PF01545 Cation efflux family AVCG678_10640 PF16916 Dimerisation domain of Zinc Transporter AVCG678_10645 PF14489 QueF-like protein AVCG678_10655 PF04955 HupE / UreJ protein AVCG678_10660 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVCG678_10675 PF01268 Formate--tetrahydrofolate ligase AVCG678_10685 PF03472 Autoinducer binding domain AVCG678_10685 PF00196 Bacterial regulatory proteins, luxR family AVCG678_10700 PF00265 Thymidine kinase AVCG678_10710 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_10715 PF00005 ABC transporter AVCG678_10715 PF00571 CBS domain AVCG678_10725 PF01022 Bacterial regulatory protein, arsR family AVCG678_10735 PF00202 Aminotransferase class-III AVCG678_10745 PF13458 Periplasmic binding protein AVCG678_10760 PF13382 Adenine deaminase C-terminal domain AVCG678_10760 PF01979 Amidohydrolase family AVCG678_10770 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AVCG678_10775 PF00128 Alpha amylase, catalytic domain AVCG678_10780 PF13439 Glycosyltransferase Family 4 AVCG678_10780 PF00534 Glycosyl transferases group 1 AVCG678_10785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVCG678_10785 PF01926 50S ribosome-binding GTPase AVCG678_10805 PF05992 SbmA/BacA-like family AVCG678_10820 PF00557 Metallopeptidase family M24 AVCG678_10825 PF00296 Luciferase-like monooxygenase AVCG678_10830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG678_10830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG678_10840 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_10840 PF01799 [2Fe-2S] binding domain AVCG678_10845 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG678_10845 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG678_10855 PF13181 Tetratricopeptide repeat AVCG678_10860 PF03466 LysR substrate binding domain AVCG678_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_10870 PF01979 Amidohydrolase family AVCG678_10880 PF00005 ABC transporter AVCG678_10885 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_10890 PF00764 Arginosuccinate synthase AVCG678_10895 PF01037 Lrp/AsnC ligand binding domain AVCG678_10910 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_10915 PF00072 Response regulator receiver domain AVCG678_10915 PF00486 Transcriptional regulatory protein, C terminal AVCG678_10925 PF00576 HIUase/Transthyretin family AVCG678_10930 PF04115 Ureidoglycolate lyase AVCG678_10935 PF00501 AMP-binding enzyme AVCG678_10935 PF13193 AMP-binding enzyme C-terminal domain AVCG678_10935 PF00668 Condensation domain AVCG678_10935 PF00550 Phosphopantetheine attachment site AVCG678_10935 PF00975 Thioesterase domain AVCG678_10940 PF00120 Glutamine synthetase, catalytic domain AVCG678_10940 PF03951 Glutamine synthetase, beta-Grasp domain AVCG678_10950 PF01014 Uricase AVCG678_10950 PF09349 OHCU decarboxylase AVCG678_10955 PF00107 Zinc-binding dehydrogenase AVCG678_10955 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_10970 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_10985 PF01266 FAD dependent oxidoreductase AVCG678_10990 PF01266 FAD dependent oxidoreductase AVCG678_10990 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVCG678_10995 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_10995 PF00072 Response regulator receiver domain AVCG678_10995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVCG678_10995 PF00672 HAMP domain AVCG678_10995 PF01627 Hpt domain AVCG678_11005 PF00270 DEAD/DEAH box helicase AVCG678_11005 PF00271 Helicase conserved C-terminal domain AVCG678_11010 PF05199 GMC oxidoreductase AVCG678_11010 PF00732 GMC oxidoreductase AVCG678_11015 PF00596 Class II Aldolase and Adducin N-terminal domain AVCG678_11015 PF00464 Serine hydroxymethyltransferase AVCG678_11020 PF01638 HxlR-like helix-turn-helix AVCG678_11150 PF05069 Phage virion morphogenesis family AVCG678_11285 PF00005 ABC transporter AVCG678_11300 PF12802 MarR family AVCG678_11310 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_11310 PF00107 Zinc-binding dehydrogenase AVCG678_11315 PF03466 LysR substrate binding domain AVCG678_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_11325 PF04168 A predicted alpha-helical domain with a conserved ER motif. AVCG678_11325 PF14403 Circularly permuted ATP-grasp type 2 AVCG678_11330 PF14403 Circularly permuted ATP-grasp type 2 AVCG678_11345 PF00239 Resolvase, N terminal domain AVCG678_11345 PF02796 Helix-turn-helix domain of resolvase AVCG678_11360 PF01152 Bacterial-like globin AVCG678_11380 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_11380 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVCG678_11385 PF01180 Dihydroorotate dehydrogenase AVCG678_11390 PF00563 EAL domain AVCG678_11390 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_11390 PF03707 Bacterial signalling protein N terminal repeat AVCG678_11400 PF00440 Bacterial regulatory proteins, tetR family AVCG678_11400 PF08362 YcdC-like protein, C-terminal region AVCG678_11405 PF01546 Peptidase family M20/M25/M40 AVCG678_11405 PF07687 Peptidase dimerisation domain AVCG678_11410 PF01979 Amidohydrolase family AVCG678_11420 PF00005 ABC transporter AVCG678_11425 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_11430 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_11445 PF00873 AcrB/AcrD/AcrF family AVCG678_11455 PF00753 Metallo-beta-lactamase superfamily AVCG678_11460 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG678_11465 PF01730 UreF AVCG678_11470 PF02814 UreE urease accessory protein, N-terminal domain AVCG678_11470 PF05194 UreE urease accessory protein, C-terminal domain AVCG678_11475 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_11475 PF00563 EAL domain AVCG678_11475 PF08448 PAS fold AVCG678_11480 PF08534 Redoxin AVCG678_11495 PF00449 Urease alpha-subunit, N-terminal domain AVCG678_11495 PF01979 Amidohydrolase family AVCG678_11505 PF07007 Lysozyme inhibitor LprI AVCG678_11510 PF00699 Urease beta subunit AVCG678_11515 PF06906 Protein of unknown function (DUF1272) AVCG678_11520 PF00547 Urease, gamma subunit AVCG678_11525 PF01774 UreD urease accessory protein AVCG678_11540 PF00005 ABC transporter AVCG678_11545 PF00005 ABC transporter AVCG678_11545 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG678_11555 PF02653 Branched-chain amino acid transport system / permease component AVCG678_11565 PF01126 Heme oxygenase AVCG678_11570 PF08446 PAS fold AVCG678_11570 PF00360 Phytochrome region AVCG678_11570 PF01590 GAF domain AVCG678_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_11570 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_11580 PF09308 LuxQ, periplasmic AVCG678_11580 PF00072 Response regulator receiver domain AVCG678_11580 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_11585 PF00072 Response regulator receiver domain AVCG678_11605 PF03776 Septum formation topological specificity factor MinE AVCG678_11610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVCG678_11615 PF03775 Septum formation inhibitor MinC, C-terminal domain AVCG678_11620 PF13458 Periplasmic binding protein AVCG678_11630 PF00005 ABC transporter AVCG678_11635 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG678_11635 PF00005 ABC transporter AVCG678_11640 PF02653 Branched-chain amino acid transport system / permease component AVCG678_11640 PF11862 Domain of unknown function (DUF3382) AVCG678_11645 PF02653 Branched-chain amino acid transport system / permease component AVCG678_11655 PF00440 Bacterial regulatory proteins, tetR family AVCG678_11660 PF07690 Major Facilitator Superfamily AVCG678_11665 PF00009 Elongation factor Tu GTP binding domain AVCG678_11670 PF00459 Inositol monophosphatase family AVCG678_11680 PF02397 Bacterial sugar transferase AVCG678_11695 PF00072 Response regulator receiver domain AVCG678_11695 PF00486 Transcriptional regulatory protein, C terminal AVCG678_11700 PF00072 Response regulator receiver domain AVCG678_11700 PF00196 Bacterial regulatory proteins, luxR family AVCG678_11705 PF10090 Histidine phosphotransferase C-terminal domain AVCG678_11725 PF00588 SpoU rRNA Methylase family AVCG678_11735 PF00849 RNA pseudouridylate synthase AVCG678_11740 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVCG678_11740 PF01266 FAD dependent oxidoreductase AVCG678_11745 PF00140 Sigma-70 factor, region 1.2 AVCG678_11745 PF04545 Sigma-70, region 4 AVCG678_11745 PF04542 Sigma-70 region 2 AVCG678_11755 PF02040 Arsenical pump membrane protein AVCG678_11770 PF00709 Adenylosuccinate synthetase AVCG678_11780 PF00149 Calcineurin-like phosphoesterase AVCG678_11785 PF02633 Creatinine amidohydrolase AVCG678_11790 PF03466 LysR substrate binding domain AVCG678_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_11800 PF00005 ABC transporter AVCG678_11810 PF07969 Amidohydrolase family AVCG678_11815 PF01565 FAD binding domain AVCG678_11815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVCG678_11820 PF02525 Flavodoxin-like fold AVCG678_11840 PF00171 Aldehyde dehydrogenase family AVCG678_11845 PF03167 Uracil DNA glycosylase superfamily AVCG678_11850 PF03328 HpcH/HpaI aldolase/citrate lyase family AVCG678_11880 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_11885 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_11890 PF00005 ABC transporter AVCG678_11890 PF08402 TOBE domain AVCG678_11900 PF01232 Mannitol dehydrogenase Rossmann domain AVCG678_11900 PF08125 Mannitol dehydrogenase C-terminal domain AVCG678_11905 PF13419 Haloacid dehalogenase-like hydrolase AVCG678_11910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG678_11910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG678_11925 PF07715 TonB-dependent Receptor Plug Domain AVCG678_11925 PF00593 TonB dependent receptor AVCG678_11935 PF04199 Putative cyclase AVCG678_11945 PF01032 FecCD transport family AVCG678_11955 PF00005 ABC transporter AVCG678_11965 PF00593 TonB dependent receptor AVCG678_11965 PF07715 TonB-dependent Receptor Plug Domain AVCG678_11990 PF02322 Cytochrome bd terminal oxidase subunit II AVCG678_11995 PF01654 Cytochrome bd terminal oxidase subunit I AVCG678_12000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG678_12000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_12000 PF01842 ACT domain AVCG678_12020 PF13505 Outer membrane protein beta-barrel domain AVCG678_12025 PF00296 Luciferase-like monooxygenase AVCG678_12030 PF02075 Crossover junction endodeoxyribonuclease RuvC AVCG678_12035 PF01330 RuvA N terminal domain AVCG678_12035 PF07499 RuvA, C-terminal domain AVCG678_12040 PF15937 prlF antitoxin for toxin YhaV_toxin AVCG678_12050 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVCG678_12050 PF05491 RuvB C-terminal winged helix domain AVCG678_12050 PF17864 RuvB AAA lid domain AVCG678_12055 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG678_12055 PF00149 Calcineurin-like phosphoesterase AVCG678_12060 PF00293 NUDIX domain AVCG678_12065 PF00293 NUDIX domain AVCG678_12075 PF03061 Thioesterase superfamily AVCG678_12080 PF01618 MotA/TolQ/ExbB proton channel family AVCG678_12085 PF02472 Biopolymer transport protein ExbD/TolR AVCG678_12095 PF07676 WD40-like Beta Propeller Repeat AVCG678_12095 PF04052 TolB amino-terminal domain AVCG678_12100 PF00691 OmpA family AVCG678_12110 PF01171 PP-loop family AVCG678_12115 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_12115 PF06480 FtsH Extracellular AVCG678_12115 PF01434 Peptidase family M41 AVCG678_12115 PF17862 AAA+ lid domain AVCG678_12120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVCG678_12120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVCG678_12120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVCG678_12120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVCG678_12125 PF01709 Transcriptional regulator AVCG678_12140 PF03471 Transporter associated domain AVCG678_12140 PF00999 Sodium/hydrogen exchanger family AVCG678_12140 PF02080 TrkA-C domain AVCG678_12160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVCG678_12160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVCG678_12165 PF00456 Transketolase, thiamine diphosphate binding domain AVCG678_12165 PF02779 Transketolase, pyrimidine binding domain AVCG678_12165 PF02780 Transketolase, C-terminal domain AVCG678_12190 PF00672 HAMP domain AVCG678_12190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_12190 PF02203 Tar ligand binding domain homologue AVCG678_12195 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVCG678_12200 PF13277 YmdB-like protein AVCG678_12205 PF00162 Phosphoglycerate kinase AVCG678_12210 PF00274 Fructose-bisphosphate aldolase class-I AVCG678_12215 PF02567 Phenazine biosynthesis-like protein AVCG678_12250 PF01197 Ribosomal protein L31 AVCG678_12255 PF00664 ABC transporter transmembrane region AVCG678_12255 PF00005 ABC transporter AVCG678_12260 PF00890 FAD binding domain AVCG678_12265 PF00691 OmpA family AVCG678_12265 PF01389 OmpA-like transmembrane domain AVCG678_12275 PF00459 Inositol monophosphatase family AVCG678_12285 PF02581 Thiamine monophosphate synthase AVCG678_12295 PF01022 Bacterial regulatory protein, arsR family AVCG678_12310 PF00731 AIR carboxylase AVCG678_12315 PF02222 ATP-grasp domain AVCG678_12315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVCG678_12320 PF00444 Ribosomal protein L36 AVCG678_12330 PF12697 Alpha/beta hydrolase family AVCG678_12335 PF00224 Pyruvate kinase, barrel domain AVCG678_12335 PF02887 Pyruvate kinase, alpha/beta domain AVCG678_12355 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AVCG678_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_12360 PF03466 LysR substrate binding domain AVCG678_12365 PF03547 Membrane transport protein AVCG678_12375 PF02954 Bacterial regulatory protein, Fis family AVCG678_12375 PF00072 Response regulator receiver domain AVCG678_12375 PF00158 Sigma-54 interaction domain AVCG678_12385 PF00117 Glutamine amidotransferase class-I AVCG678_12385 PF00425 chorismate binding enzyme AVCG678_12385 PF04715 Anthranilate synthase component I, N terminal region AVCG678_12390 PF01063 Amino-transferase class IV AVCG678_12400 PF03435 Saccharopine dehydrogenase NADP binding domain AVCG678_12400 PF16653 Saccharopine dehydrogenase C-terminal domain AVCG678_12410 PF02872 5'-nucleotidase, C-terminal domain AVCG678_12410 PF00149 Calcineurin-like phosphoesterase AVCG678_12415 PF00762 Ferrochelatase AVCG678_12420 PF01757 Acyltransferase family AVCG678_12425 PF02203 Tar ligand binding domain homologue AVCG678_12425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_12425 PF00672 HAMP domain AVCG678_12435 PF04055 Radical SAM superfamily AVCG678_12440 PF01242 6-pyruvoyl tetrahydropterin synthase AVCG678_12445 PF06508 Queuosine biosynthesis protein QueC AVCG678_12450 PF01145 SPFH domain / Band 7 family AVCG678_12450 PF16200 C-terminal region of band_7 AVCG678_12460 PF00571 CBS domain AVCG678_12460 PF01380 SIS domain AVCG678_12470 PF00483 Nucleotidyl transferase AVCG678_12475 PF13406 Transglycosylase SLT domain AVCG678_12485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_12485 PF00672 HAMP domain AVCG678_12485 PF02203 Tar ligand binding domain homologue AVCG678_12490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_12490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVCG678_12500 PF01850 PIN domain AVCG678_12510 PF00310 Glutamine amidotransferases class-II AVCG678_12510 PF01645 Conserved region in glutamate synthase AVCG678_12510 PF01493 GXGXG motif AVCG678_12510 PF04898 Glutamate synthase central domain AVCG678_12515 PF01212 Beta-eliminating lyase AVCG678_12520 PF00011 Hsp20/alpha crystallin family AVCG678_12535 PF00459 Inositol monophosphatase family AVCG678_12545 PF00072 Response regulator receiver domain AVCG678_12555 PF00924 Mechanosensitive ion channel AVCG678_12560 PF00483 Nucleotidyl transferase AVCG678_12560 PF01050 Mannose-6-phosphate isomerase AVCG678_12570 PF04168 A predicted alpha-helical domain with a conserved ER motif. AVCG678_12570 PF14403 Circularly permuted ATP-grasp type 2 AVCG678_12575 PF01841 Transglutaminase-like superfamily AVCG678_12575 PF08379 Bacterial transglutaminase-like N-terminal region AVCG678_12590 PF00343 Carbohydrate phosphorylase AVCG678_12595 PF00128 Alpha amylase, catalytic domain AVCG678_12595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG678_12595 PF02806 Alpha amylase, C-terminal all-beta domain AVCG678_12600 PF00483 Nucleotidyl transferase AVCG678_12605 PF00534 Glycosyl transferases group 1 AVCG678_12605 PF08323 Starch synthase catalytic domain AVCG678_12610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVCG678_12610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVCG678_12610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVCG678_12610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVCG678_12615 PF00128 Alpha amylase, catalytic domain AVCG678_12615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG678_12615 PF18390 Glycogen debranching enzyme C-terminal domain AVCG678_12620 PF01575 MaoC like domain AVCG678_12630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVCG678_12650 PF01165 Ribosomal protein S21 AVCG678_12655 PF01266 FAD dependent oxidoreductase AVCG678_12665 PF01571 Aminomethyltransferase folate-binding domain AVCG678_12665 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG678_12665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_12665 PF17806 Sarcosine oxidase A3 domain AVCG678_12670 PF04268 Sarcosine oxidase, gamma subunit family AVCG678_12680 PF01638 HxlR-like helix-turn-helix AVCG678_12685 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AVCG678_12690 PF04221 RelB antitoxin AVCG678_12700 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AVCG678_12720 PF03480 Bacterial extracellular solute-binding protein, family 7 AVCG678_12725 PF07722 Peptidase C26 AVCG678_12730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG678_12730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_12735 PF00356 Bacterial regulatory proteins, lacI family AVCG678_12740 PF01047 MarR family AVCG678_12745 PF02633 Creatinine amidohydrolase AVCG678_12750 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG678_12750 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG678_12760 PF02203 Tar ligand binding domain homologue AVCG678_12760 PF00672 HAMP domain AVCG678_12760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_12765 PF03922 OmpW family AVCG678_12775 PF03150 Di-haem cytochrome c peroxidase AVCG678_12785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG678_12785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG678_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_12790 PF03466 LysR substrate binding domain AVCG678_12820 PF01081 KDPG and KHG aldolase AVCG678_12825 PF01928 CYTH domain AVCG678_12835 PF13280 WYL domain AVCG678_12835 PF08279 HTH domain AVCG678_12845 PF17773 UPF0176 acylphosphatase like domain AVCG678_12845 PF00581 Rhodanese-like domain AVCG678_12850 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_12850 PF13426 PAS domain AVCG678_12850 PF00563 EAL domain AVCG678_12860 PF00232 Glycosyl hydrolase family 1 AVCG678_12870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_12870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_12880 PF01261 Xylose isomerase-like TIM barrel AVCG678_12885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG678_12885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG678_12890 PF00356 Bacterial regulatory proteins, lacI family AVCG678_12895 PF07690 Major Facilitator Superfamily AVCG678_12900 PF13533 Biotin-lipoyl like AVCG678_12905 PF17922 Tetracyclin repressor-like, C-terminal domain AVCG678_12905 PF00440 Bacterial regulatory proteins, tetR family AVCG678_12910 PF03471 Transporter associated domain AVCG678_12910 PF03741 Integral membrane protein TerC family AVCG678_12920 PF10576 Iron-sulfur binding domain of endonuclease III AVCG678_12920 PF00633 Helix-hairpin-helix motif AVCG678_12920 PF00730 HhH-GPD superfamily base excision DNA repair protein AVCG678_12930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVCG678_12930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVCG678_12940 PF04198 Putative sugar-binding domain AVCG678_12940 PF13936 Helix-turn-helix domain AVCG678_12945 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVCG678_12965 PF00152 tRNA synthetases class II (D, K and N) AVCG678_12965 PF01336 OB-fold nucleic acid binding domain AVCG678_12970 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVCG678_12975 PF03600 Citrate transporter AVCG678_12975 PF02080 TrkA-C domain AVCG678_12990 PF00664 ABC transporter transmembrane region AVCG678_12990 PF00005 ABC transporter AVCG678_12990 PF03412 Peptidase C39 family AVCG678_13025 PF00005 ABC transporter AVCG678_13025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_13030 PF07687 Peptidase dimerisation domain AVCG678_13030 PF01546 Peptidase family M20/M25/M40 AVCG678_13035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_13040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_13045 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13050 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_13050 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13060 PF00005 ABC transporter AVCG678_13065 PF13533 Biotin-lipoyl like AVCG678_13070 PF03576 Peptidase family S58 AVCG678_13075 PF07969 Amidohydrolase family AVCG678_13080 PF00005 ABC transporter AVCG678_13080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_13085 PF00005 ABC transporter AVCG678_13085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_13090 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13090 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_13095 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_13105 PF01244 Membrane dipeptidase (Peptidase family M19) AVCG678_13110 PF00294 pfkB family carbohydrate kinase AVCG678_13115 PF07729 FCD domain AVCG678_13115 PF00392 Bacterial regulatory proteins, gntR family AVCG678_13120 PF02614 Glucuronate isomerase AVCG678_13125 PF07883 Cupin domain AVCG678_13130 PF04962 KduI/IolB family AVCG678_13140 PF01232 Mannitol dehydrogenase Rossmann domain AVCG678_13140 PF08125 Mannitol dehydrogenase C-terminal domain AVCG678_13145 PF03786 D-mannonate dehydratase (UxuA) AVCG678_13150 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AVCG678_13150 PF08666 SAF domain AVCG678_13160 PF02233 NAD(P) transhydrogenase beta subunit AVCG678_13165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVCG678_13165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVCG678_13165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVCG678_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_13170 PF03466 LysR substrate binding domain AVCG678_13175 PF13407 Periplasmic binding protein domain AVCG678_13180 PF00005 ABC transporter AVCG678_13185 PF02653 Branched-chain amino acid transport system / permease component AVCG678_13195 PF00920 Dehydratase family AVCG678_13200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_13205 PF00171 Aldehyde dehydrogenase family AVCG678_13210 PF05035 2-keto-3-deoxy-galactonokinase AVCG678_13215 PF01081 KDPG and KHG aldolase AVCG678_13220 PF04304 Protein of unknown function (DUF454) AVCG678_13225 PF00892 EamA-like transporter family AVCG678_13230 PF00392 Bacterial regulatory proteins, gntR family AVCG678_13230 PF07729 FCD domain AVCG678_13235 PF07690 Major Facilitator Superfamily AVCG678_13245 PF06832 Penicillin-Binding Protein C-terminus Family AVCG678_13245 PF00912 Transglycosylase AVCG678_13245 PF00905 Penicillin binding protein transpeptidase domain AVCG678_13250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_13250 PF00672 HAMP domain AVCG678_13255 PF16363 GDP-mannose 4,6 dehydratase AVCG678_13260 PF04101 Glycosyltransferase family 28 C-terminal domain AVCG678_13260 PF03033 Glycosyltransferase family 28 N-terminal domain AVCG678_13265 PF00534 Glycosyl transferases group 1 AVCG678_13265 PF13439 Glycosyltransferase Family 4 AVCG678_13275 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_13275 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13280 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_13290 PF00005 ABC transporter AVCG678_13290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_13305 PF00534 Glycosyl transferases group 1 AVCG678_13305 PF13439 Glycosyltransferase Family 4 AVCG678_13310 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVCG678_13310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVCG678_13310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVCG678_13325 PF00005 ABC transporter AVCG678_13325 PF00664 ABC transporter transmembrane region AVCG678_13330 PF12320 Type 5 capsule protein repressor C-terminal domain AVCG678_13330 PF00149 Calcineurin-like phosphoesterase AVCG678_13335 PF13476 AAA domain AVCG678_13340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_13340 PF00672 HAMP domain AVCG678_13340 PF02203 Tar ligand binding domain homologue AVCG678_13380 PF01259 SAICAR synthetase AVCG678_13385 PF08361 MAATS-type transcriptional repressor, C-terminal region AVCG678_13385 PF00440 Bacterial regulatory proteins, tetR family AVCG678_13390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG678_13390 PF00529 HlyD membrane-fusion protein of T1SS AVCG678_13395 PF00873 AcrB/AcrD/AcrF family AVCG678_13400 PF02321 Outer membrane efflux protein AVCG678_13405 PF08207 Elongation factor P (EF-P) KOW-like domain AVCG678_13405 PF09285 Elongation factor P, C-terminal AVCG678_13405 PF01132 Elongation factor P (EF-P) OB domain AVCG678_13410 PF00152 tRNA synthetases class II (D, K and N) AVCG678_13415 PF04055 Radical SAM superfamily AVCG678_13415 PF12544 Lysine-2,3-aminomutase AVCG678_13420 PF00550 Phosphopantetheine attachment site AVCG678_13460 PF00534 Glycosyl transferases group 1 AVCG678_13460 PF13439 Glycosyltransferase Family 4 AVCG678_13475 PF00150 Cellulase (glycosyl hydrolase family 5) AVCG678_13480 PF00551 Formyl transferase AVCG678_13485 PF00202 Aminotransferase class-III AVCG678_13495 PF13411 MerR HTH family regulatory protein AVCG678_13505 PF04675 DNA ligase N terminus AVCG678_13505 PF04679 ATP dependent DNA ligase C terminal region AVCG678_13505 PF01068 ATP dependent DNA ligase domain AVCG678_13525 PF00210 Ferritin-like domain AVCG678_13535 PF00072 Response regulator receiver domain AVCG678_13540 PF08447 PAS fold AVCG678_13540 PF13426 PAS domain AVCG678_13540 PF07536 HWE histidine kinase AVCG678_13545 PF10005 zinc-ribbon domain AVCG678_13545 PF15887 Putative zinc-binding metallo-peptidase AVCG678_13565 PF08281 Sigma-70, region 4 AVCG678_13565 PF04542 Sigma-70 region 2 AVCG678_13575 PF00027 Cyclic nucleotide-binding domain AVCG678_13575 PF13545 Crp-like helix-turn-helix domain AVCG678_13585 PF01618 MotA/TolQ/ExbB proton channel family AVCG678_13590 PF02472 Biopolymer transport protein ExbD/TolR AVCG678_13600 PF07470 Glycosyl Hydrolase Family 88 AVCG678_13605 PF01679 Proteolipid membrane potential modulator AVCG678_13610 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVCG678_13615 PF00491 Arginase family AVCG678_13635 PF00480 ROK family AVCG678_13640 PF13407 Periplasmic binding protein domain AVCG678_13645 PF02653 Branched-chain amino acid transport system / permease component AVCG678_13650 PF00005 ABC transporter AVCG678_13655 PF00485 Phosphoribulokinase / Uridine kinase family AVCG678_13660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_13665 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13670 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_13675 PF00005 ABC transporter AVCG678_13685 PF00296 Luciferase-like monooxygenase AVCG678_13690 PF01979 Amidohydrolase family AVCG678_13695 PF01979 Amidohydrolase family AVCG678_13700 PF00221 Aromatic amino acid lyase AVCG678_13710 PF17392 Urocanase C-terminal domain AVCG678_13710 PF01175 Urocanase Rossmann-like domain AVCG678_13710 PF17391 Urocanase N-terminal domain AVCG678_13715 PF05962 HutD AVCG678_13725 PF00171 Aldehyde dehydrogenase family AVCG678_13730 PF04632 Fusaric acid resistance protein family AVCG678_13735 PF03055 Retinal pigment epithelial membrane protein AVCG678_13745 PF02563 Polysaccharide biosynthesis/export protein AVCG678_13750 PF03466 LysR substrate binding domain AVCG678_13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_13755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG678_13760 PF01738 Dienelactone hydrolase family AVCG678_13785 PF02563 Polysaccharide biosynthesis/export protein AVCG678_13790 PF02397 Bacterial sugar transferase AVCG678_13795 PF11089 Exopolysaccharide production repressor AVCG678_13800 PF00535 Glycosyl transferase family 2 AVCG678_13805 PF04230 Polysaccharide pyruvyl transferase AVCG678_13810 PF00535 Glycosyl transferase family 2 AVCG678_13815 PF01943 Polysaccharide biosynthesis protein AVCG678_13825 PF00722 Glycosyl hydrolases family 16 AVCG678_13835 PF00535 Glycosyl transferase family 2 AVCG678_13840 PF00535 Glycosyl transferase family 2 AVCG678_13845 PF00535 Glycosyl transferase family 2 AVCG678_13850 PF02706 Chain length determinant protein AVCG678_13850 PF13807 G-rich domain on putative tyrosine kinase AVCG678_13850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVCG678_13900 PF01551 Peptidase family M23 AVCG678_13900 PF08460 Bacterial SH3 domain AVCG678_13905 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG678_13905 PF02861 Clp amino terminal domain, pathogenicity island component AVCG678_13905 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_13905 PF07724 AAA domain (Cdc48 subfamily) AVCG678_13905 PF17871 AAA lid domain AVCG678_13915 PF05175 Methyltransferase small domain AVCG678_13915 PF17827 PrmC N-terminal domain AVCG678_13920 PF03462 PCRF domain AVCG678_13920 PF00472 RF-1 domain AVCG678_13925 PF01590 GAF domain AVCG678_13925 PF05524 PEP-utilising enzyme, N-terminal AVCG678_13925 PF00391 PEP-utilising enzyme, mobile domain AVCG678_13925 PF02896 PEP-utilising enzyme, TIM barrel domain AVCG678_13930 PF13840 ACT domain AVCG678_13930 PF00696 Amino acid kinase family AVCG678_13930 PF01842 ACT domain AVCG678_13935 PF03706 Lysylphosphatidylglycerol synthase TM region AVCG678_13935 PF09924 Uncharacterised conserved protein (DUF2156) AVCG678_13950 PF08241 Methyltransferase domain AVCG678_13965 PF00795 Carbon-nitrogen hydrolase AVCG678_13970 PF00462 Glutaredoxin AVCG678_13975 PF00156 Phosphoribosyl transferase domain AVCG678_13980 PF08241 Methyltransferase domain AVCG678_13995 PF00293 NUDIX domain AVCG678_14005 PF01960 ArgJ family AVCG678_14015 PF07516 SecA Wing and Scaffold domain AVCG678_14015 PF07517 SecA DEAD-like domain AVCG678_14015 PF02810 SEC-C motif AVCG678_14015 PF01043 SecA preprotein cross-linking domain AVCG678_14030 PF00501 AMP-binding enzyme AVCG678_14030 PF13193 AMP-binding enzyme C-terminal domain AVCG678_14040 PF17151 Periplasmic sensor domain AVCG678_14040 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_14045 PF04717 Type VI secretion system, phage-baseplate injector AVCG678_14080 PF00248 Aldo/keto reductase family AVCG678_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_14085 PF03466 LysR substrate binding domain AVCG678_14125 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVCG678_14135 PF00106 short chain dehydrogenase AVCG678_14145 PF01923 Cobalamin adenosyltransferase AVCG678_14150 PF01012 Electron transfer flavoprotein domain AVCG678_14155 PF00766 Electron transfer flavoprotein FAD-binding domain AVCG678_14155 PF01012 Electron transfer flavoprotein domain AVCG678_14160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_14160 PF00672 HAMP domain AVCG678_14165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVCG678_14165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVCG678_14175 PF08534 Redoxin AVCG678_14180 PF14698 Argininosuccinate lyase C-terminal AVCG678_14180 PF00206 Lyase AVCG678_14190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG678_14190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG678_14200 PF00072 Response regulator receiver domain AVCG678_14205 PF00156 Phosphoribosyl transferase domain AVCG678_14215 PF00005 ABC transporter AVCG678_14235 PF04752 ChaC-like protein AVCG678_14245 PF02153 Prephenate dehydrogenase AVCG678_14250 PF00155 Aminotransferase class I and II AVCG678_14255 PF01209 ubiE/COQ5 methyltransferase family AVCG678_14260 PF00753 Metallo-beta-lactamase superfamily AVCG678_14260 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVCG678_14285 PF00830 Ribosomal L28 family AVCG678_14290 PF02592 Putative vitamin uptake transporter AVCG678_14300 PF11775 Cobalamin biosynthesis protein CobT VWA domain AVCG678_14300 PF06213 Cobalamin biosynthesis protein CobT AVCG678_14305 PF08406 CbbQ/NirQ/NorQ C-terminal AVCG678_14305 PF07728 AAA domain (dynein-related subfamily) AVCG678_14305 PF12556 Cobaltochelatase CobS subunit N terminal AVCG678_14310 PF00226 DnaJ domain AVCG678_14315 PF01722 BolA-like protein AVCG678_14320 PF01761 3-dehydroquinate synthase AVCG678_14325 PF01202 Shikimate kinase AVCG678_14335 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_14335 PF00589 Phage integrase family AVCG678_14340 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVCG678_14345 PF03734 L,D-transpeptidase catalytic domain AVCG678_14350 PF01206 Sulfurtransferase TusA AVCG678_14355 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG678_14355 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG678_14360 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG678_14360 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG678_14365 PF07687 Peptidase dimerisation domain AVCG678_14365 PF01546 Peptidase family M20/M25/M40 AVCG678_14375 PF01594 AI-2E family transporter AVCG678_14385 PF03472 Autoinducer binding domain AVCG678_14385 PF00196 Bacterial regulatory proteins, luxR family AVCG678_14390 PF01514 Secretory protein of YscJ/FliF family AVCG678_14390 PF08345 Flagellar M-ring protein C-terminal AVCG678_14400 PF03975 CheD chemotactic sensory transduction AVCG678_14405 PF00072 Response regulator receiver domain AVCG678_14410 PF01339 CheB methylesterase AVCG678_14410 PF00072 Response regulator receiver domain AVCG678_14415 PF03705 CheR methyltransferase, all-alpha domain AVCG678_14415 PF01739 CheR methyltransferase, SAM binding domain AVCG678_14420 PF01584 CheW-like domain AVCG678_14425 PF01627 Hpt domain AVCG678_14425 PF02895 Signal transducing histidine kinase, homodimeric domain AVCG678_14425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_14425 PF01584 CheW-like domain AVCG678_14430 PF00072 Response regulator receiver domain AVCG678_14440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_14445 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVCG678_14445 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVCG678_14445 PF13288 DXP reductoisomerase C-terminal domain AVCG678_14450 PF00144 Beta-lactamase AVCG678_14455 PF00155 Aminotransferase class I and II AVCG678_14465 PF01103 Surface antigen AVCG678_14465 PF07244 Surface antigen variable number repeat AVCG678_14465 PF17243 POTRA domain TamA domain 1 AVCG678_14475 PF08447 PAS fold AVCG678_14475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_14475 PF13426 PAS domain AVCG678_14480 PF01584 CheW-like domain AVCG678_14485 PF07690 Major Facilitator Superfamily AVCG678_14495 PF02634 FdhD/NarQ family AVCG678_14500 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVCG678_14500 PF12838 4Fe-4S dicluster domain AVCG678_14500 PF00384 Molybdopterin oxidoreductase AVCG678_14500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG678_14500 PF01568 Molydopterin dinucleotide binding domain AVCG678_14505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVCG678_14505 PF00037 4Fe-4S binding domain AVCG678_14505 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVCG678_14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_14515 PF03466 LysR substrate binding domain AVCG678_14520 PF01022 Bacterial regulatory protein, arsR family AVCG678_14525 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVCG678_14525 PF00056 lactate/malate dehydrogenase, NAD binding domain AVCG678_14530 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVCG678_14535 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVCG678_14535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG678_14540 PF00231 ATP synthase AVCG678_14545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG678_14545 PF00306 ATP synthase alpha/beta chain, C terminal domain AVCG678_14545 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVCG678_14550 PF00213 ATP synthase delta (OSCP) subunit AVCG678_14560 PF00270 DEAD/DEAH box helicase AVCG678_14560 PF17764 3′ DNA-binding domain (3′BD) AVCG678_14560 PF18074 Primosomal protein N C-terminal domain AVCG678_14560 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVCG678_14565 PF00672 HAMP domain AVCG678_14565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_14575 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_14575 PF00589 Phage integrase family AVCG678_14585 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_14585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG678_14590 PF01810 LysE type translocator AVCG678_14600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVCG678_14600 PF00364 Biotin-requiring enzyme AVCG678_14600 PF02817 e3 binding domain AVCG678_14605 PF16078 2-oxoglutarate dehydrogenase N-terminus AVCG678_14605 PF00676 Dehydrogenase E1 component AVCG678_14605 PF16870 2-oxoglutarate dehydrogenase C-terminal AVCG678_14605 PF02779 Transketolase, pyrimidine binding domain AVCG678_14610 PF02629 CoA binding domain AVCG678_14610 PF00549 CoA-ligase AVCG678_14620 PF08442 ATP-grasp domain AVCG678_14620 PF00549 CoA-ligase AVCG678_14625 PF00056 lactate/malate dehydrogenase, NAD binding domain AVCG678_14625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVCG678_14630 PF03969 AFG1-like ATPase AVCG678_14635 PF02974 Protease inhibitor Inh AVCG678_14640 PF13085 2Fe-2S iron-sulfur cluster binding domain AVCG678_14640 PF13237 4Fe-4S dicluster domain AVCG678_14645 PF00890 FAD binding domain AVCG678_14645 PF02910 Fumarate reductase flavoprotein C-term AVCG678_14655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVCG678_14680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVCG678_14680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVCG678_14685 PF00814 Glycoprotease family AVCG678_14690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVCG678_14690 PF03900 Porphobilinogen deaminase, C-terminal domain AVCG678_14715 PF00117 Glutamine amidotransferase class-I AVCG678_14720 PF07690 Major Facilitator Superfamily AVCG678_14725 PF02325 YGGT family AVCG678_14730 PF02594 Uncharacterised ACR, YggU family COG1872 AVCG678_14735 PF00719 Inorganic pyrophosphatase AVCG678_14745 PF00679 Elongation factor G C-terminus AVCG678_14745 PF00009 Elongation factor Tu GTP binding domain AVCG678_14745 PF03144 Elongation factor Tu domain 2 AVCG678_14750 PF09423 PhoD-like phosphatase AVCG678_14750 PF16655 PhoD-like phosphatase, N-terminal domain AVCG678_14755 PF01432 Peptidase family M3 AVCG678_14760 PF07690 Major Facilitator Superfamily AVCG678_14765 PF00764 Arginosuccinate synthase AVCG678_14770 PF00106 short chain dehydrogenase AVCG678_14780 PF01810 LysE type translocator AVCG678_14790 PF04055 Radical SAM superfamily AVCG678_14805 PF01329 Pterin 4 alpha carbinolamine dehydratase AVCG678_14810 PF02834 LigT like Phosphoesterase AVCG678_14815 PF13472 GDSL-like Lipase/Acylhydrolase family AVCG678_14820 PF00005 ABC transporter AVCG678_14830 PF01027 Inhibitor of apoptosis-promoting Bax1 AVCG678_14850 PF00330 Aconitase family (aconitate hydratase) AVCG678_14850 PF00694 Aconitase C-terminal domain AVCG678_14855 PF00005 ABC transporter AVCG678_14860 PF03379 CcmB protein AVCG678_14865 PF01578 Cytochrome C assembly protein AVCG678_14875 PF08534 Redoxin AVCG678_14880 PF10755 Protein of unknown function (DUF2585) AVCG678_14885 PF04279 Intracellular septation protein A AVCG678_14890 PF00448 SRP54-type protein, GTPase domain AVCG678_14890 PF02881 SRP54-type protein, helical bundle domain AVCG678_14895 PF00919 Uncharacterized protein family UPF0004 AVCG678_14895 PF04055 Radical SAM superfamily AVCG678_14900 PF01678 Diaminopimelate epimerase AVCG678_14905 PF12706 Beta-lactamase superfamily domain AVCG678_14915 PF00448 SRP54-type protein, GTPase domain AVCG678_14915 PF02881 SRP54-type protein, helical bundle domain AVCG678_14915 PF02978 Signal peptide binding domain AVCG678_14920 PF01817 Chorismate mutase type II AVCG678_14920 PF02153 Prephenate dehydrogenase AVCG678_14925 PF00886 Ribosomal protein S16 AVCG678_14930 PF05239 PRC-barrel domain AVCG678_14930 PF01782 RimM N-terminal domain AVCG678_14935 PF01746 tRNA (Guanine-1)-methyltransferase AVCG678_14945 PF01245 Ribosomal protein L19 AVCG678_14960 PF04234 CopC domain AVCG678_14965 PF04234 CopC domain AVCG678_14965 PF05425 Copper resistance protein D AVCG678_14965 PF13115 YtkA-like AVCG678_14970 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_14975 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_14995 PF00330 Aconitase family (aconitate hydratase) AVCG678_15000 PF00248 Aldo/keto reductase family AVCG678_15010 PF00072 Response regulator receiver domain AVCG678_15010 PF00486 Transcriptional regulatory protein, C terminal AVCG678_15030 PF03548 Outer membrane lipoprotein carrier protein LolA AVCG678_15035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVCG678_15035 PF17854 FtsK alpha domain AVCG678_15035 PF09397 Ftsk gamma domain AVCG678_15035 PF01580 FtsK/SpoIIIE family AVCG678_15040 PF00909 Ammonium Transporter Family AVCG678_15045 PF00543 Nitrogen regulatory protein P-II AVCG678_15055 PF01494 FAD binding domain AVCG678_15060 PF03966 Trm112p-like protein AVCG678_15065 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVCG678_15065 PF05362 Lon protease (S16) C-terminal proteolytic domain AVCG678_15065 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_15070 PF00085 Thioredoxin AVCG678_15085 PF07690 Major Facilitator Superfamily AVCG678_15090 PF01263 Aldose 1-epimerase AVCG678_15105 PF04204 Homoserine O-succinyltransferase AVCG678_15110 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_15110 PF17862 AAA+ lid domain AVCG678_15110 PF01434 Peptidase family M41 AVCG678_15125 PF01165 Ribosomal protein S21 AVCG678_15135 PF00005 ABC transporter AVCG678_15135 PF16326 ABC transporter C-terminal domain AVCG678_15155 PF01547 Bacterial extracellular solute-binding protein AVCG678_15160 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_15165 PF00005 ABC transporter AVCG678_15170 PF01435 Peptidase family M48 AVCG678_15175 PF04545 Sigma-70, region 4 AVCG678_15175 PF00140 Sigma-70 factor, region 1.2 AVCG678_15175 PF04542 Sigma-70 region 2 AVCG678_15180 PF00183 Hsp90 protein AVCG678_15185 PF00210 Ferritin-like domain AVCG678_15195 PF02590 Predicted SPOUT methyltransferase AVCG678_15205 PF01467 Cytidylyltransferase-like AVCG678_15210 PF00171 Aldehyde dehydrogenase family AVCG678_15215 PF00696 Amino acid kinase family AVCG678_15215 PF01472 PUA domain AVCG678_15220 PF01018 GTP1/OBG AVCG678_15220 PF01926 50S ribosome-binding GTPase AVCG678_15240 PF01016 Ribosomal L27 protein AVCG678_15245 PF00829 Ribosomal prokaryotic L21 protein AVCG678_15255 PF05159 Capsule polysaccharide biosynthesis protein AVCG678_15260 PF05159 Capsule polysaccharide biosynthesis protein AVCG678_15265 PF01808 AICARFT/IMPCHase bienzyme AVCG678_15265 PF02142 MGS-like domain AVCG678_15275 PF01189 16S rRNA methyltransferase RsmB/F AVCG678_15275 PF01029 NusB family AVCG678_15280 PF01435 Peptidase family M48 AVCG678_15300 PF13180 PDZ domain AVCG678_15300 PF03572 Peptidase family S41 AVCG678_15310 PF00293 NUDIX domain AVCG678_15315 PF13614 AAA domain AVCG678_15340 PF01339 CheB methylesterase AVCG678_15340 PF00072 Response regulator receiver domain AVCG678_15345 PF01739 CheR methyltransferase, SAM binding domain AVCG678_15345 PF03705 CheR methyltransferase, all-alpha domain AVCG678_15350 PF01584 CheW-like domain AVCG678_15355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_15355 PF12729 Four helix bundle sensory module for signal transduction AVCG678_15355 PF00672 HAMP domain AVCG678_15360 PF00672 HAMP domain AVCG678_15360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_15360 PF17202 Single cache domain 3 AVCG678_15365 PF00672 HAMP domain AVCG678_15365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_15365 PF02203 Tar ligand binding domain homologue AVCG678_15370 PF01584 CheW-like domain AVCG678_15375 PF01584 CheW-like domain AVCG678_15375 PF02895 Signal transducing histidine kinase, homodimeric domain AVCG678_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_15375 PF01627 Hpt domain AVCG678_15375 PF07194 P2 response regulator binding domain AVCG678_15380 PF00072 Response regulator receiver domain AVCG678_15390 PF00072 Response regulator receiver domain AVCG678_15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_15395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVCG678_15400 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVCG678_15400 PF00171 Aldehyde dehydrogenase family AVCG678_15400 PF01619 Proline dehydrogenase AVCG678_15400 PF14850 DNA-binding domain of Proline dehydrogenase AVCG678_15405 PF01037 Lrp/AsnC ligand binding domain AVCG678_15415 PF01205 Uncharacterized protein family UPF0029 AVCG678_15420 PF00106 short chain dehydrogenase AVCG678_15425 PF00155 Aminotransferase class I and II AVCG678_15430 PF14765 Polyketide synthase dehydratase AVCG678_15430 PF00550 Phosphopantetheine attachment site AVCG678_15430 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_15430 PF08659 KR domain AVCG678_15430 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_15430 PF08990 Erythronolide synthase docking AVCG678_15430 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_15430 PF00698 Acyl transferase domain AVCG678_15430 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_15435 PF07690 Major Facilitator Superfamily AVCG678_15440 PF04551 GcpE protein AVCG678_15445 PF13488 Glycine zipper AVCG678_15445 PF00691 OmpA family AVCG678_15455 PF00348 Polyprenyl synthetase AVCG678_15460 PF00912 Transglycosylase AVCG678_15470 PF01783 Ribosomal L32p protein family AVCG678_15475 PF05233 PHB accumulation regulatory domain AVCG678_15475 PF07879 PHB/PHA accumulation regulator DNA-binding domain AVCG678_15480 PF00108 Thiolase, N-terminal domain AVCG678_15480 PF02803 Thiolase, C-terminal domain AVCG678_15505 PF01479 S4 domain AVCG678_15510 PF11953 Domain of unknown function (DUF3470) AVCG678_15510 PF00037 4Fe-4S binding domain AVCG678_15530 PF03328 HpcH/HpaI aldolase/citrate lyase family AVCG678_15540 PF00694 Aconitase C-terminal domain AVCG678_15545 PF00180 Isocitrate/isopropylmalate dehydrogenase AVCG678_15550 PF01569 PAP2 superfamily AVCG678_15555 PF08946 Osmosensory transporter coiled coil AVCG678_15555 PF00083 Sugar (and other) transporter AVCG678_15560 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVCG678_15560 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVCG678_15575 PF00484 Carbonic anhydrase AVCG678_15580 PF08543 Phosphomethylpyrimidine kinase AVCG678_15585 PF05088 Bacterial NAD-glutamate dehydrogenase AVCG678_15595 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AVCG678_15595 PF06165 Glycosyltransferase family 36 AVCG678_15595 PF10091 Putative glucoamylase AVCG678_15600 PF07687 Peptidase dimerisation domain AVCG678_15600 PF01546 Peptidase family M20/M25/M40 AVCG678_15605 PF00664 ABC transporter transmembrane region AVCG678_15605 PF00005 ABC transporter AVCG678_15615 PF02436 Conserved carboxylase domain AVCG678_15615 PF00682 HMGL-like AVCG678_15615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_15615 PF02785 Biotin carboxylase C-terminal domain AVCG678_15615 PF00364 Biotin-requiring enzyme AVCG678_15615 PF00289 Biotin carboxylase, N-terminal domain AVCG678_15625 PF16177 Acetyl-coenzyme A synthetase N-terminus AVCG678_15625 PF13193 AMP-binding enzyme C-terminal domain AVCG678_15625 PF00501 AMP-binding enzyme AVCG678_15635 PF01168 Alanine racemase, N-terminal domain AVCG678_15640 PF08264 Anticodon-binding domain of tRNA AVCG678_15640 PF13603 Leucyl-tRNA synthetase, Domain 2 AVCG678_15640 PF00133 tRNA synthetases class I (I, L, M and V) AVCG678_15655 PF02195 ParB-like nuclease domain AVCG678_15655 PF17762 HTH domain found in ParB protein AVCG678_15660 PF13614 AAA domain AVCG678_15665 PF02527 rRNA small subunit methyltransferase G AVCG678_15670 PF01134 Glucose inhibited division protein A AVCG678_15670 PF13932 GidA associated domain AVCG678_15675 PF12631 MnmE helical domain AVCG678_15675 PF10396 GTP-binding protein TrmE N-terminus AVCG678_15675 PF01926 50S ribosome-binding GTPase AVCG678_15680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG678_15680 PF07498 Rho termination factor, N-terminal domain AVCG678_15680 PF07497 Rho termination factor, RNA-binding domain AVCG678_15685 PF03653 Uncharacterised protein family (UPF0093) AVCG678_15690 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVCG678_15695 PF03618 Kinase/pyrophosphorylase AVCG678_15700 PF02545 Maf-like protein AVCG678_15705 PF08501 Shikimate dehydrogenase substrate binding domain AVCG678_15705 PF01488 Shikimate / quinate 5-dehydrogenase AVCG678_15705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVCG678_15710 PF01121 Dephospho-CoA kinase AVCG678_15715 PF00929 Exonuclease AVCG678_15720 PF02556 Preprotein translocase subunit SecB AVCG678_15725 PF04186 FxsA cytoplasmic membrane protein AVCG678_15735 PF06725 3D domain AVCG678_15735 PF03562 MltA specific insert domain AVCG678_15750 PF00204 DNA gyrase B AVCG678_15750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_15750 PF01751 Toprim domain AVCG678_15750 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG678_15775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVCG678_15780 PF00291 Pyridoxal-phosphate dependent enzyme AVCG678_15785 PF00290 Tryptophan synthase alpha chain AVCG678_15790 PF01039 Carboxyl transferase domain AVCG678_15795 PF02875 Mur ligase family, glutamate ligase domain AVCG678_15795 PF08245 Mur ligase middle domain AVCG678_15820 PF00085 Thioredoxin AVCG678_15830 PF07724 AAA domain (Cdc48 subfamily) AVCG678_15830 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_15830 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG678_15835 PF00227 Proteasome subunit AVCG678_15840 PF00475 Imidazoleglycerol-phosphate dehydratase AVCG678_15845 PF00117 Glutamine amidotransferase class-I AVCG678_15850 PF00977 Histidine biosynthesis protein AVCG678_15855 PF00977 Histidine biosynthesis protein AVCG678_15860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVCG678_15865 PF00485 Phosphoribulokinase / Uridine kinase family AVCG678_15875 PF00472 RF-1 domain AVCG678_15880 PF01293 Phosphoenolpyruvate carboxykinase AVCG678_15885 PF00486 Transcriptional regulatory protein, C terminal AVCG678_15885 PF00072 Response regulator receiver domain AVCG678_15890 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_15890 PF13755 Sensor N-terminal transmembrane domain AVCG678_15890 PF13756 Stimulus-sensing domain AVCG678_15890 PF00672 HAMP domain AVCG678_15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_15900 PF03610 PTS system fructose IIA component AVCG678_15900 PF03830 PTS system sorbose subfamily IIB component AVCG678_15905 PF00381 PTS HPr component phosphorylation site AVCG678_15910 PF05221 S-adenosyl-L-homocysteine hydrolase AVCG678_15910 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVCG678_15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_15915 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_15920 PF01636 Phosphotransferase enzyme family AVCG678_15925 PF12804 MobA-like NTP transferase domain AVCG678_15930 PF12705 PD-(D/E)XK nuclease superfamily AVCG678_15935 PF00580 UvrD/REP helicase N-terminal domain AVCG678_15935 PF13361 UvrD-like helicase C-terminal domain AVCG678_15940 PF01274 Malate synthase AVCG678_15955 PF00072 Response regulator receiver domain AVCG678_15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_15960 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_15965 PF08482 ATP-dependent helicase C-terminal AVCG678_15965 PF04408 Helicase associated domain (HA2) AVCG678_15965 PF00270 DEAD/DEAH box helicase AVCG678_15965 PF00271 Helicase conserved C-terminal domain AVCG678_15970 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVCG678_16015 PF07690 Major Facilitator Superfamily AVCG678_16020 PF00701 Dihydrodipicolinate synthetase family AVCG678_16025 PF00356 Bacterial regulatory proteins, lacI family AVCG678_16035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_16035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_16045 PF00294 pfkB family carbohydrate kinase AVCG678_16050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVCG678_16050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVCG678_16050 PF00205 Thiamine pyrophosphate enzyme, central domain AVCG678_16055 PF01261 Xylose isomerase-like TIM barrel AVCG678_16065 PF04962 KduI/IolB family AVCG678_16090 PF00106 short chain dehydrogenase AVCG678_16110 PF04542 Sigma-70 region 2 AVCG678_16110 PF04545 Sigma-70, region 4 AVCG678_16115 PF12973 ChrR Cupin-like domain AVCG678_16125 PF00455 DeoR C terminal sensor domain AVCG678_16125 PF08220 DeoR-like helix-turn-helix domain AVCG678_16130 PF01266 FAD dependent oxidoreductase AVCG678_16130 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVCG678_16135 PF00005 ABC transporter AVCG678_16135 PF08402 TOBE domain AVCG678_16140 PF00005 ABC transporter AVCG678_16145 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_16150 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_16165 PF00034 Cytochrome c AVCG678_16170 PF02348 Cytidylyltransferase AVCG678_16175 PF01817 Chorismate mutase type II AVCG678_16175 PF00800 Prephenate dehydratase AVCG678_16180 PF00933 Glycosyl hydrolase family 3 N terminal domain AVCG678_16185 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AVCG678_16185 PF09297 NADH pyrophosphatase zinc ribbon domain AVCG678_16185 PF00293 NUDIX domain AVCG678_16200 PF12170 DNA polymerase III tau subunit V interacting with alpha AVCG678_16200 PF12169 DNA polymerase III subunits gamma and tau domain III AVCG678_16200 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVCG678_16205 PF02575 YbaB/EbfC DNA-binding family AVCG678_16215 PF07411 Domain of unknown function (DUF1508) AVCG678_16230 PF12327 FtsZ family, C-terminal domain AVCG678_16230 PF00091 Tubulin/FtsZ family, GTPase domain AVCG678_16235 PF00009 Elongation factor Tu GTP binding domain AVCG678_16235 PF03144 Elongation factor Tu domain 2 AVCG678_16235 PF06421 GTP-binding protein LepA C-terminus AVCG678_16235 PF00679 Elongation factor G C-terminus AVCG678_16245 PF16347 Domain of unknown function (DUF4976) AVCG678_16245 PF00884 Sulfatase AVCG678_16250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVCG678_16250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVCG678_16250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVCG678_16250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVCG678_16255 PF03061 Thioesterase superfamily AVCG678_16270 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVCG678_16280 PF03960 ArsC family AVCG678_16285 PF04073 Aminoacyl-tRNA editing domain AVCG678_16290 PF02073 Thermophilic metalloprotease (M29) AVCG678_16305 PF00313 'Cold-shock' DNA-binding domain AVCG678_16310 PF13742 OB-fold nucleic acid binding domain AVCG678_16310 PF02601 Exonuclease VII, large subunit AVCG678_16325 PF00535 Glycosyl transferase family 2 AVCG678_16335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_16335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_16340 PF00248 Aldo/keto reductase family AVCG678_16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_16345 PF03466 LysR substrate binding domain AVCG678_16350 PF00248 Aldo/keto reductase family AVCG678_16365 PF13662 Toprim domain AVCG678_16365 PF02132 RecR protein AVCG678_16370 PF13406 Transglycosylase SLT domain AVCG678_16400 PF05977 Transmembrane secretion effector AVCG678_16410 PF02576 RimP N-terminal domain AVCG678_16410 PF17384 RimP C-terminal SH3 domain AVCG678_16415 PF13184 NusA-like KH domain AVCG678_16415 PF08529 NusA N-terminal domain AVCG678_16415 PF00575 S1 RNA binding domain AVCG678_16425 PF04760 Translation initiation factor IF-2, N-terminal region AVCG678_16425 PF08364 Bacterial translation initiation factor IF-2 associated region AVCG678_16425 PF11987 Translation-initiation factor 2 AVCG678_16425 PF00009 Elongation factor Tu GTP binding domain AVCG678_16430 PF02033 Ribosome-binding factor A AVCG678_16435 PF09157 Pseudouridine synthase II TruB, C-terminal AVCG678_16435 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVCG678_16435 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVCG678_16440 PF00312 Ribosomal protein S15 AVCG678_16445 PF03725 3' exoribonuclease family, domain 2 AVCG678_16445 PF01138 3' exoribonuclease family, domain 1 AVCG678_16445 PF00575 S1 RNA binding domain AVCG678_16445 PF00013 KH domain AVCG678_16445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVCG678_16450 PF05175 Methyltransferase small domain AVCG678_16450 PF08468 Methyltransferase small domain N-terminal AVCG678_16460 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_16460 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_16465 PF07977 FabA-like domain AVCG678_16470 PF01475 Ferric uptake regulator family AVCG678_16475 PF03458 UPF0126 domain AVCG678_16485 PF07690 Major Facilitator Superfamily AVCG678_16485 PF00083 Sugar (and other) transporter AVCG678_16500 PF02224 Cytidylate kinase AVCG678_16505 PF00575 S1 RNA binding domain AVCG678_16525 PF00707 Translation initiation factor IF-3, C-terminal domain AVCG678_16525 PF05198 Translation initiation factor IF-3, N-terminal domain AVCG678_16530 PF00072 Response regulator receiver domain AVCG678_16530 PF00486 Transcriptional regulatory protein, C terminal AVCG678_16535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_16540 PF01632 Ribosomal protein L35 AVCG678_16545 PF00453 Ribosomal protein L20 AVCG678_16550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVCG678_16550 PF01409 tRNA synthetases class II core domain (F) AVCG678_16560 PF01588 Putative tRNA binding domain AVCG678_16560 PF03147 Ferredoxin-fold anticodon binding domain AVCG678_16560 PF03484 tRNA synthetase B5 domain AVCG678_16560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVCG678_16560 PF03483 B3/4 domain AVCG678_16565 PF07886 BA14K-like protein AVCG678_16590 PF00437 Type II/IV secretion system protein AVCG678_16605 PF13629 Pilus formation protein N terminal region AVCG678_16605 PF00263 Bacterial type II and III secretion system protein AVCG678_16605 PF04972 BON domain AVCG678_16645 PF01676 Metalloenzyme superfamily AVCG678_16650 PF00962 Adenosine/AMP deaminase AVCG678_16665 PF01810 LysE type translocator AVCG678_16670 PF00300 Histidine phosphatase superfamily (branch 1) AVCG678_16675 PF05173 Dihydrodipicolinate reductase, C-terminus AVCG678_16675 PF01113 Dihydrodipicolinate reductase, N-terminus AVCG678_16680 PF00005 ABC transporter AVCG678_16680 PF00664 ABC transporter transmembrane region AVCG678_16685 PF02685 Glucokinase AVCG678_16690 PF02142 MGS-like domain AVCG678_16695 PF03411 Penicillin-insensitive murein endopeptidase AVCG678_16700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_16705 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_16710 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_16710 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_16715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_16715 PF00005 ABC transporter AVCG678_16720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_16730 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVCG678_16730 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVCG678_16760 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG678_16765 PF00005 ABC transporter AVCG678_16770 PF02653 Branched-chain amino acid transport system / permease component AVCG678_16775 PF02653 Branched-chain amino acid transport system / permease component AVCG678_16780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVCG678_16785 PF01048 Phosphorylase superfamily AVCG678_16790 PF01791 DeoC/LacD family aldolase AVCG678_16795 PF00591 Glycosyl transferase family, a/b domain AVCG678_16795 PF02885 Glycosyl transferase family, helical bundle domain AVCG678_16795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AVCG678_16800 PF07702 UTRA domain AVCG678_16800 PF00392 Bacterial regulatory proteins, gntR family AVCG678_16805 PF06754 Phosphonate metabolism protein PhnG AVCG678_16810 PF05845 Bacterial phosphonate metabolism protein (PhnH) AVCG678_16815 PF05861 Bacterial phosphonate metabolism protein (PhnI) AVCG678_16820 PF06007 Phosphonate metabolism protein PhnJ AVCG678_16825 PF00005 ABC transporter AVCG678_16830 PF00005 ABC transporter AVCG678_16835 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_16840 PF00005 ABC transporter AVCG678_16850 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_16855 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_16860 PF06299 Protein of unknown function (DUF1045) AVCG678_16865 PF07969 Amidohydrolase family AVCG678_16870 PF00625 Guanylate kinase AVCG678_16880 PF00883 Cytosol aminopeptidase family, catalytic domain AVCG678_16880 PF02789 Cytosol aminopeptidase family, N-terminal domain AVCG678_16885 PF04264 YceI-like domain AVCG678_16890 PF04264 YceI-like domain AVCG678_16900 PF00877 NlpC/P60 family AVCG678_16910 PF00476 DNA polymerase family A AVCG678_16910 PF01367 5'-3' exonuclease, C-terminal SAM fold AVCG678_16910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVCG678_16910 PF01612 3'-5' exonuclease AVCG678_16920 PF07687 Peptidase dimerisation domain AVCG678_16920 PF01546 Peptidase family M20/M25/M40 AVCG678_16925 PF04073 Aminoacyl-tRNA editing domain AVCG678_16935 PF17092 Penicillin-binding protein OB-like domain AVCG678_16935 PF00905 Penicillin binding protein transpeptidase domain AVCG678_16935 PF00912 Transglycosylase AVCG678_16940 PF00012 Hsp70 protein AVCG678_16950 PF00226 DnaJ domain AVCG678_16950 PF01556 DnaJ C terminal domain AVCG678_16950 PF00684 DnaJ central domain AVCG678_16955 PF04102 SlyX AVCG678_16960 PF02463 RecF/RecN/SMC N terminal domain AVCG678_16965 PF00899 ThiF family AVCG678_16965 PF00581 Rhodanese-like domain AVCG678_16975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG678_16975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_16985 PF00294 pfkB family carbohydrate kinase AVCG678_16990 PF00563 EAL domain AVCG678_16990 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_16990 PF03707 Bacterial signalling protein N terminal repeat AVCG678_16990 PF13188 PAS domain AVCG678_16995 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AVCG678_17000 PF00361 Proton-conducting membrane transporter AVCG678_17000 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG678_17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_17005 PF03466 LysR substrate binding domain AVCG678_17020 PF00440 Bacterial regulatory proteins, tetR family AVCG678_17025 PF02540 NAD synthase AVCG678_17025 PF00117 Glutamine amidotransferase class-I AVCG678_17025 PF00958 GMP synthase C terminal domain AVCG678_17040 PF03073 TspO/MBR family AVCG678_17065 PF01189 16S rRNA methyltransferase RsmB/F AVCG678_17065 PF01029 NusB family AVCG678_17070 PF03330 Lytic transglycolase AVCG678_17080 PF08331 Domain of unknown function (DUF1730) AVCG678_17085 PF13417 Glutathione S-transferase, N-terminal domain AVCG678_17085 PF00043 Glutathione S-transferase, C-terminal domain AVCG678_17090 PF02673 Bacitracin resistance protein BacA AVCG678_17110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVCG678_17120 PF13649 Methyltransferase domain AVCG678_17125 PF02767 DNA polymerase III beta subunit, central domain AVCG678_17125 PF00712 DNA polymerase III beta subunit, N-terminal domain AVCG678_17125 PF02768 DNA polymerase III beta subunit, C-terminal domain AVCG678_17130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_17135 PF02021 Uncharacterised protein family UPF0102 AVCG678_17140 PF13416 Bacterial extracellular solute-binding protein AVCG678_17145 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17150 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17155 PF00005 ABC transporter AVCG678_17165 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVCG678_17165 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVCG678_17170 PF01078 Magnesium chelatase, subunit ChlI AVCG678_17170 PF13335 Magnesium chelatase, subunit ChlI C-terminal AVCG678_17175 PF00291 Pyridoxal-phosphate dependent enzyme AVCG678_17185 PF01810 LysE type translocator AVCG678_17190 PF00692 dUTPase AVCG678_17195 PF16658 Class II release factor RF3, C-terminal domain AVCG678_17195 PF00009 Elongation factor Tu GTP binding domain AVCG678_17195 PF03144 Elongation factor Tu domain 2 AVCG678_17200 PF00982 Glycosyltransferase family 20 AVCG678_17205 PF02358 Trehalose-phosphatase AVCG678_17210 PF08543 Phosphomethylpyrimidine kinase AVCG678_17225 PF05726 Pirin C-terminal cupin domain AVCG678_17225 PF02678 Pirin AVCG678_17235 PF03466 LysR substrate binding domain AVCG678_17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_17250 PF04127 DNA / pantothenate metabolism flavoprotein AVCG678_17250 PF02441 Flavoprotein AVCG678_17255 PF13426 PAS domain AVCG678_17255 PF07568 Histidine kinase AVCG678_17255 PF13581 Histidine kinase-like ATPase domain AVCG678_17260 PF00072 Response regulator receiver domain AVCG678_17265 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_17265 PF00072 Response regulator receiver domain AVCG678_17265 PF01627 Hpt domain AVCG678_17265 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_17270 PF03109 ABC1 family AVCG678_17275 PF01209 ubiE/COQ5 methyltransferase family AVCG678_17280 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVCG678_17280 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVCG678_17285 PF01649 Ribosomal protein S20 AVCG678_17290 PF13614 AAA domain AVCG678_17295 PF07506 RepB plasmid partitioning protein AVCG678_17295 PF02195 ParB-like nuclease domain AVCG678_17300 PF11800 Replication protein C C-terminal region AVCG678_17300 PF03428 Replication protein C N-terminal domain AVCG678_17305 PF13091 PLD-like domain AVCG678_17310 PF03706 Lysylphosphatidylglycerol synthase TM region AVCG678_17320 PF05899 Protein of unknown function (DUF861) AVCG678_17320 PF07883 Cupin domain AVCG678_17340 PF01037 Lrp/AsnC ligand binding domain AVCG678_17345 PF00005 ABC transporter AVCG678_17350 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_17355 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17360 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17365 PF02574 Homocysteine S-methyltransferase AVCG678_17370 PF01032 FecCD transport family AVCG678_17380 PF00005 ABC transporter AVCG678_17385 PF01546 Peptidase family M20/M25/M40 AVCG678_17395 PF00534 Glycosyl transferases group 1 AVCG678_17395 PF08323 Starch synthase catalytic domain AVCG678_17415 PF13593 SBF-like CPA transporter family (DUF4137) AVCG678_17420 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_17420 PF00107 Zinc-binding dehydrogenase AVCG678_17425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_17425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG678_17435 PF01202 Shikimate kinase AVCG678_17440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVCG678_17440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG678_17450 PF00356 Bacterial regulatory proteins, lacI family AVCG678_17460 PF02653 Branched-chain amino acid transport system / permease component AVCG678_17465 PF00005 ABC transporter AVCG678_17475 PF11972 HTH DNA binding domain AVCG678_17475 PF07756 Protein of unknown function (DUF1612) AVCG678_17480 PF13407 Periplasmic binding protein domain AVCG678_17485 PF00005 ABC transporter AVCG678_17490 PF02653 Branched-chain amino acid transport system / permease component AVCG678_17495 PF02653 Branched-chain amino acid transport system / permease component AVCG678_17500 PF00392 Bacterial regulatory proteins, gntR family AVCG678_17500 PF07729 FCD domain AVCG678_17505 PF00171 Aldehyde dehydrogenase family AVCG678_17510 PF00171 Aldehyde dehydrogenase family AVCG678_17520 PF03737 Aldolase/RraA AVCG678_17525 PF00920 Dehydratase family AVCG678_17530 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17535 PF00005 ABC transporter AVCG678_17545 PF00392 Bacterial regulatory proteins, gntR family AVCG678_17545 PF07729 FCD domain AVCG678_17550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_17555 PF00881 Nitroreductase family AVCG678_17570 PF01740 STAS domain AVCG678_17570 PF00916 Sulfate permease family AVCG678_17575 PF00582 Universal stress protein family AVCG678_17590 PF16859 Tetracyclin repressor-like, C-terminal domain AVCG678_17590 PF00440 Bacterial regulatory proteins, tetR family AVCG678_17595 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_17610 PF01613 Flavin reductase like domain AVCG678_17635 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG678_17650 PF07729 FCD domain AVCG678_17650 PF00392 Bacterial regulatory proteins, gntR family AVCG678_17655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_17660 PF00232 Glycosyl hydrolase family 1 AVCG678_17665 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17670 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17670 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_17675 PF01979 Amidohydrolase family AVCG678_17690 PF03841 L-seryl-tRNA selenium transferase AVCG678_17695 PF00360 Phytochrome region AVCG678_17695 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_17695 PF01590 GAF domain AVCG678_17695 PF00563 EAL domain AVCG678_17715 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG678_17715 PF01799 [2Fe-2S] binding domain AVCG678_17715 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_17720 PF00941 FAD binding domain in molybdopterin dehydrogenase AVCG678_17720 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVCG678_17725 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG678_17725 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG678_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_17730 PF01627 Hpt domain AVCG678_17730 PF00072 Response regulator receiver domain AVCG678_17730 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_17735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_17735 PF03466 LysR substrate binding domain AVCG678_17745 PF00561 alpha/beta hydrolase fold AVCG678_17750 PF00106 short chain dehydrogenase AVCG678_17760 PF03449 Transcription elongation factor, N-terminal AVCG678_17760 PF01272 Transcription elongation factor, GreA/GreB, C-term AVCG678_17765 PF11975 Family 4 glycosyl hydrolase C-terminal domain AVCG678_17765 PF02056 Family 4 glycosyl hydrolase AVCG678_17770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_17770 PF00005 ABC transporter AVCG678_17775 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17775 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_17780 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_17790 PF11975 Family 4 glycosyl hydrolase C-terminal domain AVCG678_17790 PF02056 Family 4 glycosyl hydrolase AVCG678_17795 PF12833 Helix-turn-helix domain AVCG678_17795 PF01497 Periplasmic binding protein AVCG678_17810 PF00486 Transcriptional regulatory protein, C terminal AVCG678_17810 PF00072 Response regulator receiver domain AVCG678_17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_17820 PF00226 DnaJ domain AVCG678_17825 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_17825 PF00107 Zinc-binding dehydrogenase AVCG678_17830 PF13378 Enolase C-terminal domain-like AVCG678_17830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVCG678_17840 PF00248 Aldo/keto reductase family AVCG678_17850 PF02653 Branched-chain amino acid transport system / permease component AVCG678_17855 PF00005 ABC transporter AVCG678_17860 PF07729 FCD domain AVCG678_17860 PF00392 Bacterial regulatory proteins, gntR family AVCG678_17870 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17875 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_17880 PF00005 ABC transporter AVCG678_17880 PF17912 MalK OB fold domain AVCG678_17895 PF00356 Bacterial regulatory proteins, lacI family AVCG678_17900 PF00005 ABC transporter AVCG678_17900 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG678_17910 PF02653 Branched-chain amino acid transport system / permease component AVCG678_17920 PF00005 ABC transporter AVCG678_17925 PF00672 HAMP domain AVCG678_17925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_17930 PF00296 Luciferase-like monooxygenase AVCG678_17935 PF00296 Luciferase-like monooxygenase AVCG678_17940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_17940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_17945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_17945 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_17945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_17950 PF00248 Aldo/keto reductase family AVCG678_17965 PF02653 Branched-chain amino acid transport system / permease component AVCG678_17970 PF00005 ABC transporter AVCG678_17975 PF13407 Periplasmic binding protein domain AVCG678_17980 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG678_17990 PF00005 ABC transporter AVCG678_17995 PF02653 Branched-chain amino acid transport system / permease component AVCG678_18000 PF02653 Branched-chain amino acid transport system / permease component AVCG678_18005 PF00296 Luciferase-like monooxygenase AVCG678_18010 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_18015 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18020 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18025 PF00005 ABC transporter AVCG678_18030 PF03972 MmgE/PrpD family AVCG678_18035 PF00296 Luciferase-like monooxygenase AVCG678_18040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_18045 PF00296 Luciferase-like monooxygenase AVCG678_18050 PF00005 ABC transporter AVCG678_18050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18055 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18055 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_18060 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_18080 PF00196 Bacterial regulatory proteins, luxR family AVCG678_18080 PF00072 Response regulator receiver domain AVCG678_18085 PF00672 HAMP domain AVCG678_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_18085 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_18090 PF00141 Peroxidase AVCG678_18100 PF04074 YhcH/YjgK/YiaL AVCG678_18105 PF00701 Dihydrodipicolinate synthetase family AVCG678_18110 PF07690 Major Facilitator Superfamily AVCG678_18115 PF00356 Bacterial regulatory proteins, lacI family AVCG678_18120 PF00296 Luciferase-like monooxygenase AVCG678_18125 PF00296 Luciferase-like monooxygenase AVCG678_18130 PF07687 Peptidase dimerisation domain AVCG678_18130 PF01546 Peptidase family M20/M25/M40 AVCG678_18140 PF00005 ABC transporter AVCG678_18145 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_18155 PF00296 Luciferase-like monooxygenase AVCG678_18160 PF00672 HAMP domain AVCG678_18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_18160 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_18165 PF00486 Transcriptional regulatory protein, C terminal AVCG678_18165 PF00072 Response regulator receiver domain AVCG678_18175 PF00873 AcrB/AcrD/AcrF family AVCG678_18185 PF14525 AraC-binding-like domain AVCG678_18190 PF00296 Luciferase-like monooxygenase AVCG678_18195 PF01613 Flavin reductase like domain AVCG678_18205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_18205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_18205 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_18215 PF00440 Bacterial regulatory proteins, tetR family AVCG678_18215 PF16859 Tetracyclin repressor-like, C-terminal domain AVCG678_18235 PF00171 Aldehyde dehydrogenase family AVCG678_18245 PF12833 Helix-turn-helix domain AVCG678_18250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG678_18250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG678_18255 PF00596 Class II Aldolase and Adducin N-terminal domain AVCG678_18260 PF00202 Aminotransferase class-III AVCG678_18275 PF13610 DDE domain AVCG678_18285 PF00106 short chain dehydrogenase AVCG678_18315 PF04542 Sigma-70 region 2 AVCG678_18315 PF08281 Sigma-70, region 4 AVCG678_18325 PF03831 PhnA domain AVCG678_18325 PF08274 PhnA Zinc-Ribbon AVCG678_18330 PF01011 PQQ enzyme repeat AVCG678_18335 PF01047 MarR family AVCG678_18335 PF00480 ROK family AVCG678_18345 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18350 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18355 PF00005 ABC transporter AVCG678_18355 PF17912 MalK OB fold domain AVCG678_18360 PF03009 Glycerophosphoryl diester phosphodiesterase family AVCG678_18390 PF17990 L-Lysine epsilon oxidase N-terminal AVCG678_18390 PF18417 L-lysine epsilon oxidase C-terminal domain AVCG678_18400 PF03334 Na+/H+ antiporter subunit AVCG678_18405 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVCG678_18410 PF01899 Na+/H+ ion antiporter subunit AVCG678_18415 PF00361 Proton-conducting membrane transporter AVCG678_18420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVCG678_18425 PF13244 Domain of unknown function (DUF4040) AVCG678_18425 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVCG678_18425 PF00361 Proton-conducting membrane transporter AVCG678_18425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG678_18435 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG678_18440 PF01425 Amidase AVCG678_18445 PF00005 ABC transporter AVCG678_18450 PF02653 Branched-chain amino acid transport system / permease component AVCG678_18455 PF02653 Branched-chain amino acid transport system / permease component AVCG678_18460 PF07969 Amidohydrolase family AVCG678_18465 PF01979 Amidohydrolase family AVCG678_18475 PF02633 Creatinine amidohydrolase AVCG678_18480 PF13454 FAD-NAD(P)-binding AVCG678_18485 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18490 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18495 PF00005 ABC transporter AVCG678_18495 PF08402 TOBE domain AVCG678_18500 PF13416 Bacterial extracellular solute-binding protein AVCG678_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_18505 PF03466 LysR substrate binding domain AVCG678_18510 PF17874 MalT-like TPR region AVCG678_18510 PF00196 Bacterial regulatory proteins, luxR family AVCG678_18515 PF01425 Amidase AVCG678_18520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_18525 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18530 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18530 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_18535 PF00005 ABC transporter AVCG678_18535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18540 PF00005 ABC transporter AVCG678_18545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18545 PF00005 ABC transporter AVCG678_18555 PF01266 FAD dependent oxidoreductase AVCG678_18565 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18570 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18570 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_18580 PF00005 ABC transporter AVCG678_18590 PF02653 Branched-chain amino acid transport system / permease component AVCG678_18600 PF01047 MarR family AVCG678_18605 PF01613 Flavin reductase like domain AVCG678_18630 PF00043 Glutathione S-transferase, C-terminal domain AVCG678_18630 PF02798 Glutathione S-transferase, N-terminal domain AVCG678_18645 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG678_18650 PF07995 Glucose / Sorbosone dehydrogenase AVCG678_18660 PF00534 Glycosyl transferases group 1 AVCG678_18660 PF13439 Glycosyltransferase Family 4 AVCG678_18675 PF00199 Catalase AVCG678_18675 PF18011 C-terminal domain found in long catalases AVCG678_18675 PF06628 Catalase-related immune-responsive AVCG678_18680 PF01384 Phosphate transporter family AVCG678_18685 PF00005 ABC transporter AVCG678_18685 PF17912 MalK OB fold domain AVCG678_18690 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18695 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18700 PF13416 Bacterial extracellular solute-binding protein AVCG678_18705 PF00149 Calcineurin-like phosphoesterase AVCG678_18710 PF00171 Aldehyde dehydrogenase family AVCG678_18715 PF00480 ROK family AVCG678_18720 PF01791 DeoC/LacD family aldolase AVCG678_18725 PF04198 Putative sugar-binding domain AVCG678_18730 PF13407 Periplasmic binding protein domain AVCG678_18735 PF02653 Branched-chain amino acid transport system / permease component AVCG678_18740 PF00005 ABC transporter AVCG678_18755 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG678_18760 PF00392 Bacterial regulatory proteins, gntR family AVCG678_18765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_18770 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18775 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18775 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_18780 PF00005 ABC transporter AVCG678_18780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18785 PF00005 ABC transporter AVCG678_18790 PF01321 Creatinase/Prolidase N-terminal domain AVCG678_18790 PF00557 Metallopeptidase family M24 AVCG678_18795 PF00392 Bacterial regulatory proteins, gntR family AVCG678_18795 PF07729 FCD domain AVCG678_18800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_18805 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18810 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18810 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_18820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18820 PF00005 ABC transporter AVCG678_18825 PF03738 Glutathionylspermidine synthase preATP-grasp AVCG678_18835 PF03994 Domain of Unknown Function (DUF350) AVCG678_18845 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AVCG678_18860 PF00501 AMP-binding enzyme AVCG678_18860 PF13193 AMP-binding enzyme C-terminal domain AVCG678_18870 PF07729 FCD domain AVCG678_18870 PF00392 Bacterial regulatory proteins, gntR family AVCG678_18875 PF00196 Bacterial regulatory proteins, luxR family AVCG678_18875 PF00072 Response regulator receiver domain AVCG678_18880 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18885 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_18885 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_18890 PF00005 ABC transporter AVCG678_18910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_18915 PF00072 Response regulator receiver domain AVCG678_18915 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_18920 PF13188 PAS domain AVCG678_18920 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_18920 PF00989 PAS fold AVCG678_18920 PF13426 PAS domain AVCG678_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_18925 PF00196 Bacterial regulatory proteins, luxR family AVCG678_18925 PF00072 Response regulator receiver domain AVCG678_18930 PF07730 Histidine kinase AVCG678_18930 PF05384 Sensor protein DegS AVCG678_18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_18940 PF07690 Major Facilitator Superfamily AVCG678_18945 PF12857 TOBE-like domain AVCG678_18945 PF00005 ABC transporter AVCG678_18950 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18955 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18965 PF00356 Bacterial regulatory proteins, lacI family AVCG678_18970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_18970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_18980 PF01547 Bacterial extracellular solute-binding protein AVCG678_18985 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18990 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_18995 PF08402 TOBE domain AVCG678_18995 PF00005 ABC transporter AVCG678_19005 PF00005 ABC transporter AVCG678_19010 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_19020 PF03466 LysR substrate binding domain AVCG678_19025 PF07969 Amidohydrolase family AVCG678_19030 PF02929 Beta galactosidase small chain AVCG678_19030 PF02837 Glycosyl hydrolases family 2, sugar binding domain AVCG678_19030 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AVCG678_19030 PF00703 Glycosyl hydrolases family 2 AVCG678_19030 PF16353 Domain of unknown function(DUF4981) AVCG678_19035 PF00480 ROK family AVCG678_19035 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG678_19040 PF01226 Formate/nitrite transporter AVCG678_19045 PF01979 Amidohydrolase family AVCG678_19055 PF02653 Branched-chain amino acid transport system / permease component AVCG678_19060 PF02653 Branched-chain amino acid transport system / permease component AVCG678_19065 PF00005 ABC transporter AVCG678_19080 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_19080 PF00355 Rieske [2Fe-2S] domain AVCG678_19090 PF01979 Amidohydrolase family AVCG678_19090 PF13382 Adenine deaminase C-terminal domain AVCG678_19095 PF03466 LysR substrate binding domain AVCG678_19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_19110 PF05199 GMC oxidoreductase AVCG678_19110 PF00732 GMC oxidoreductase AVCG678_19115 PF01979 Amidohydrolase family AVCG678_19125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG678_19125 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG678_19130 PF01799 [2Fe-2S] binding domain AVCG678_19130 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_19135 PF00171 Aldehyde dehydrogenase family AVCG678_19140 PF01144 Coenzyme A transferase AVCG678_19145 PF01144 Coenzyme A transferase AVCG678_19150 PF07729 FCD domain AVCG678_19150 PF00392 Bacterial regulatory proteins, gntR family AVCG678_19155 PF01070 FMN-dependent dehydrogenase AVCG678_19165 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG678_19170 PF01494 FAD binding domain AVCG678_19175 PF13458 Periplasmic binding protein AVCG678_19190 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG678_19190 PF00005 ABC transporter AVCG678_19195 PF00005 ABC transporter AVCG678_19200 PF01261 Xylose isomerase-like TIM barrel AVCG678_19200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG678_19210 PF01220 Dehydroquinase class II AVCG678_19215 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVCG678_19215 PF08501 Shikimate dehydrogenase substrate binding domain AVCG678_19220 PF00005 ABC transporter AVCG678_19225 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_19230 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19235 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG678_19245 PF00128 Alpha amylase, catalytic domain AVCG678_19245 PF11941 Domain of unknown function (DUF3459) AVCG678_19250 PF00128 Alpha amylase, catalytic domain AVCG678_19255 PF02566 OsmC-like protein AVCG678_19270 PF00005 ABC transporter AVCG678_19275 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19280 PF09084 NMT1/THI5 like AVCG678_19285 PF09084 NMT1/THI5 like AVCG678_19290 PF00296 Luciferase-like monooxygenase AVCG678_19295 PF02082 Transcriptional regulator AVCG678_19300 PF01613 Flavin reductase like domain AVCG678_19310 PF03466 LysR substrate binding domain AVCG678_19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_19320 PF13533 Biotin-lipoyl like AVCG678_19325 PF00873 AcrB/AcrD/AcrF family AVCG678_19330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_19330 PF03466 LysR substrate binding domain AVCG678_19355 PF01494 FAD binding domain AVCG678_19375 PF01370 NAD dependent epimerase/dehydratase family AVCG678_19385 PF00005 ABC transporter AVCG678_19395 PF00989 PAS fold AVCG678_19395 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_19395 PF13493 Domain of unknown function (DUF4118) AVCG678_19395 PF08447 PAS fold AVCG678_19395 PF13426 PAS domain AVCG678_19400 PF00196 Bacterial regulatory proteins, luxR family AVCG678_19400 PF00072 Response regulator receiver domain AVCG678_19410 PF00005 ABC transporter AVCG678_19410 PF17912 MalK OB fold domain AVCG678_19415 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19420 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19425 PF13416 Bacterial extracellular solute-binding protein AVCG678_19430 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19440 PF08402 TOBE domain AVCG678_19440 PF00005 ABC transporter AVCG678_19455 PF00480 ROK family AVCG678_19460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_19465 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19470 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_19470 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_19475 PF00005 ABC transporter AVCG678_19480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_19480 PF00005 ABC transporter AVCG678_19485 PF00486 Transcriptional regulatory protein, C terminal AVCG678_19485 PF00072 Response regulator receiver domain AVCG678_19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_19490 PF07689 KaiB domain AVCG678_19490 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_19500 PF00202 Aminotransferase class-III AVCG678_19510 PF00892 EamA-like transporter family AVCG678_19530 PF00892 EamA-like transporter family AVCG678_19545 PF03552 Cellulose synthase AVCG678_19545 PF00535 Glycosyl transferase family 2 AVCG678_19545 PF07238 PilZ domain AVCG678_19560 PF13426 PAS domain AVCG678_19560 PF07536 HWE histidine kinase AVCG678_19560 PF08447 PAS fold AVCG678_19565 PF07536 HWE histidine kinase AVCG678_19565 PF13426 PAS domain AVCG678_19570 PF00072 Response regulator receiver domain AVCG678_19580 PF03193 RsgA GTPase AVCG678_19585 PF13426 PAS domain AVCG678_19585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_19585 PF00072 Response regulator receiver domain AVCG678_19590 PF16363 GDP-mannose 4,6 dehydratase AVCG678_19600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_19600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_19605 PF00005 ABC transporter AVCG678_19610 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_19620 PF00356 Bacterial regulatory proteins, lacI family AVCG678_19625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_19625 PF00672 HAMP domain AVCG678_19630 PF01584 CheW-like domain AVCG678_19635 PF13533 Biotin-lipoyl like AVCG678_19640 PF00873 AcrB/AcrD/AcrF family AVCG678_19645 PF00873 AcrB/AcrD/AcrF family AVCG678_19650 PF00392 Bacterial regulatory proteins, gntR family AVCG678_19650 PF07729 FCD domain AVCG678_19655 PF01571 Aminomethyltransferase folate-binding domain AVCG678_19660 PF00403 Heavy-metal-associated domain AVCG678_19660 PF00403 Heavy-metal-associated domain AVCG678_19665 PF13411 MerR HTH family regulatory protein AVCG678_19670 PF00128 Alpha amylase, catalytic domain AVCG678_19670 PF02806 Alpha amylase, C-terminal all-beta domain AVCG678_19670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG678_19675 PF16657 Maltogenic Amylase, C-terminal domain AVCG678_19675 PF00128 Alpha amylase, catalytic domain AVCG678_19680 PF00128 Alpha amylase, catalytic domain AVCG678_19680 PF11896 Domain of unknown function (DUF3416) AVCG678_19685 PF02446 4-alpha-glucanotransferase AVCG678_19690 PF00313 'Cold-shock' DNA-binding domain AVCG678_19695 PF01207 Dihydrouridine synthase (Dus) AVCG678_19705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_19705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_19715 PF00392 Bacterial regulatory proteins, gntR family AVCG678_19715 PF07729 FCD domain AVCG678_19720 PF00701 Dihydrodipicolinate synthetase family AVCG678_19730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_19730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_19740 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19745 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_19755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_19760 PF17912 MalK OB fold domain AVCG678_19760 PF00005 ABC transporter AVCG678_19765 PF17284 Spermidine synthase tetramerisation domain AVCG678_19780 PF07536 HWE histidine kinase AVCG678_19780 PF13426 PAS domain AVCG678_19780 PF08447 PAS fold AVCG678_19785 PF06745 KaiC AVCG678_19790 PF13581 Histidine kinase-like ATPase domain AVCG678_19790 PF07536 HWE histidine kinase AVCG678_19790 PF13426 PAS domain AVCG678_19805 PF05974 Domain of unknown function (DUF892) AVCG678_19810 PF08281 Sigma-70, region 4 AVCG678_19810 PF04542 Sigma-70 region 2 AVCG678_19835 PF00563 EAL domain AVCG678_19835 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_19835 PF08447 PAS fold AVCG678_19835 PF08448 PAS fold AVCG678_19845 PF00211 Adenylate and Guanylate cyclase catalytic domain AVCG678_19855 PF00005 ABC transporter AVCG678_19855 PF00664 ABC transporter transmembrane region AVCG678_19860 PF00027 Cyclic nucleotide-binding domain AVCG678_19860 PF13302 Acetyltransferase (GNAT) domain AVCG678_19865 PF00459 Inositol monophosphatase family AVCG678_19875 PF08402 TOBE domain AVCG678_19875 PF00005 ABC transporter AVCG678_19880 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19895 PF00483 Nucleotidyl transferase AVCG678_19895 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_19900 PF03786 D-mannonate dehydratase (UxuA) AVCG678_19925 PF00698 Acyl transferase domain AVCG678_19925 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_19925 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_19925 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_19925 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_19925 PF08659 KR domain AVCG678_19925 PF00550 Phosphopantetheine attachment site AVCG678_19925 PF14765 Polyketide synthase dehydratase AVCG678_19930 PF00698 Acyl transferase domain AVCG678_19930 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_19930 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_19930 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_19930 PF08659 KR domain AVCG678_19930 PF00550 Phosphopantetheine attachment site AVCG678_19930 PF14765 Polyketide synthase dehydratase AVCG678_19935 PF00698 Acyl transferase domain AVCG678_19935 PF03060 Nitronate monooxygenase AVCG678_19945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_19945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_19945 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_19955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_19955 PF00005 ABC transporter AVCG678_19960 PF00005 ABC transporter AVCG678_19960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_19965 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19970 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_19970 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_19975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_19980 PF00561 alpha/beta hydrolase fold AVCG678_19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_19995 PF03466 LysR substrate binding domain AVCG678_20000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_20005 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20010 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_20010 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20015 PF00005 ABC transporter AVCG678_20015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_20020 PF00005 ABC transporter AVCG678_20020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_20025 PF01425 Amidase AVCG678_20030 PF01425 Amidase AVCG678_20040 PF00857 Isochorismatase family AVCG678_20045 PF00005 ABC transporter AVCG678_20050 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) AVCG678_20055 PF00857 Isochorismatase family AVCG678_20060 PF00795 Carbon-nitrogen hydrolase AVCG678_20065 PF02653 Branched-chain amino acid transport system / permease component AVCG678_20075 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG678_20080 PF07729 FCD domain AVCG678_20080 PF00392 Bacterial regulatory proteins, gntR family AVCG678_20085 PF00005 ABC transporter AVCG678_20085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_20090 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20090 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_20095 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_20110 PF00202 Aminotransferase class-III AVCG678_20125 PF01266 FAD dependent oxidoreductase AVCG678_20135 PF00171 Aldehyde dehydrogenase family AVCG678_20145 PF07687 Peptidase dimerisation domain AVCG678_20145 PF01546 Peptidase family M20/M25/M40 AVCG678_20150 PF08361 MAATS-type transcriptional repressor, C-terminal region AVCG678_20150 PF00440 Bacterial regulatory proteins, tetR family AVCG678_20155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG678_20160 PF00873 AcrB/AcrD/AcrF family AVCG678_20165 PF01039 Carboxyl transferase domain AVCG678_20180 PF00364 Biotin-requiring enzyme AVCG678_20180 PF00289 Biotin carboxylase, N-terminal domain AVCG678_20180 PF02785 Biotin carboxylase C-terminal domain AVCG678_20180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_20180 PF18140 Propionyl-coenzyme A carboxylase BT domain AVCG678_20195 PF02310 B12 binding domain AVCG678_20195 PF01642 Methylmalonyl-CoA mutase AVCG678_20200 PF01047 MarR family AVCG678_20215 PF13533 Biotin-lipoyl like AVCG678_20220 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG678_20230 PF00550 Phosphopantetheine attachment site AVCG678_20230 PF00975 Thioesterase domain AVCG678_20230 PF00501 AMP-binding enzyme AVCG678_20230 PF13193 AMP-binding enzyme C-terminal domain AVCG678_20230 PF00668 Condensation domain AVCG678_20235 PF01370 NAD dependent epimerase/dehydratase family AVCG678_20245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_20245 PF00005 ABC transporter AVCG678_20250 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20250 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_20255 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_20265 PF00701 Dihydrodipicolinate synthetase family AVCG678_20270 PF00392 Bacterial regulatory proteins, gntR family AVCG678_20270 PF07729 FCD domain AVCG678_20285 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AVCG678_20290 PF17912 MalK OB fold domain AVCG678_20290 PF00005 ABC transporter AVCG678_20290 PF03459 TOBE domain AVCG678_20295 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20300 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20305 PF01547 Bacterial extracellular solute-binding protein AVCG678_20310 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVCG678_20315 PF03466 LysR substrate binding domain AVCG678_20315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_20320 PF01266 FAD dependent oxidoreductase AVCG678_20325 PF00171 Aldehyde dehydrogenase family AVCG678_20330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG678_20330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVCG678_20340 PF08450 SMP-30/Gluconolactonase/LRE-like region AVCG678_20345 PF03033 Glycosyltransferase family 28 N-terminal domain AVCG678_20350 PF03472 Autoinducer binding domain AVCG678_20350 PF00196 Bacterial regulatory proteins, luxR family AVCG678_20355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG678_20355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG678_20360 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG678_20365 PF01554 MatE AVCG678_20375 PF00668 Condensation domain AVCG678_20375 PF00550 Phosphopantetheine attachment site AVCG678_20375 PF13193 AMP-binding enzyme C-terminal domain AVCG678_20375 PF00975 Thioesterase domain AVCG678_20375 PF00501 AMP-binding enzyme AVCG678_20380 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AVCG678_20410 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20415 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20420 PF16875 Glycosyl hydrolase family 36 N-terminal domain AVCG678_20420 PF16874 Glycosyl hydrolase family 36 C-terminal domain AVCG678_20425 PF00005 ABC transporter AVCG678_20425 PF17912 MalK OB fold domain AVCG678_20430 PF08533 Beta-galactosidase C-terminal domain AVCG678_20430 PF02449 Beta-galactosidase AVCG678_20430 PF08532 Beta-galactosidase trimerisation domain AVCG678_20440 PF17806 Sarcosine oxidase A3 domain AVCG678_20440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_20440 PF01571 Aminomethyltransferase folate-binding domain AVCG678_20440 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG678_20445 PF04267 Sarcosine oxidase, delta subunit family AVCG678_20450 PF01266 FAD dependent oxidoreductase AVCG678_20455 PF12833 Helix-turn-helix domain AVCG678_20455 PF01965 DJ-1/PfpI family AVCG678_20470 PF01493 GXGXG motif AVCG678_20475 PF01645 Conserved region in glutamate synthase AVCG678_20480 PF00120 Glutamine synthetase, catalytic domain AVCG678_20485 PF07690 Major Facilitator Superfamily AVCG678_20490 PF01070 FMN-dependent dehydrogenase AVCG678_20495 PF01547 Bacterial extracellular solute-binding protein AVCG678_20505 PF07470 Glycosyl Hydrolase Family 88 AVCG678_20515 PF17912 MalK OB fold domain AVCG678_20515 PF00005 ABC transporter AVCG678_20520 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20525 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20530 PF00356 Bacterial regulatory proteins, lacI family AVCG678_20540 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_20540 PF00107 Zinc-binding dehydrogenase AVCG678_20545 PF01738 Dienelactone hydrolase family AVCG678_20550 PF00571 CBS domain AVCG678_20550 PF00478 IMP dehydrogenase / GMP reductase domain AVCG678_20555 PF03466 LysR substrate binding domain AVCG678_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_20565 PF03466 LysR substrate binding domain AVCG678_20585 PF04452 RNA methyltransferase AVCG678_20590 PF01384 Phosphate transporter family AVCG678_20605 PF02913 FAD linked oxidases, C-terminal domain AVCG678_20605 PF01565 FAD binding domain AVCG678_20610 PF01565 FAD binding domain AVCG678_20620 PF13183 4Fe-4S dicluster domain AVCG678_20620 PF02754 Cysteine-rich domain AVCG678_20630 PF00043 Glutathione S-transferase, C-terminal domain AVCG678_20630 PF02798 Glutathione S-transferase, N-terminal domain AVCG678_20640 PF01634 ATP phosphoribosyltransferase AVCG678_20645 PF13393 Histidyl-tRNA synthetase AVCG678_20660 PF13393 Histidyl-tRNA synthetase AVCG678_20660 PF03129 Anticodon binding domain AVCG678_20690 PF03352 Methyladenine glycosylase AVCG678_20695 PF03734 L,D-transpeptidase catalytic domain AVCG678_20695 PF17969 L,D-transpeptidase C-terminal domain AVCG678_20695 PF01476 LysM domain AVCG678_20700 PF17969 L,D-transpeptidase C-terminal domain AVCG678_20700 PF01476 LysM domain AVCG678_20700 PF03734 L,D-transpeptidase catalytic domain AVCG678_20705 PF00196 Bacterial regulatory proteins, luxR family AVCG678_20705 PF17874 MalT-like TPR region AVCG678_20710 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AVCG678_20710 PF01648 4'-phosphopantetheinyl transferase superfamily AVCG678_20715 PF02631 RecX family AVCG678_20720 PF16884 N-terminal domain of oxidoreductase AVCG678_20720 PF00107 Zinc-binding dehydrogenase AVCG678_20735 PF00133 tRNA synthetases class I (I, L, M and V) AVCG678_20735 PF08264 Anticodon-binding domain of tRNA AVCG678_20740 PF00474 Sodium:solute symporter family AVCG678_20755 PF00701 Dihydrodipicolinate synthetase family AVCG678_20770 PF01687 Riboflavin kinase AVCG678_20770 PF06574 FAD synthetase AVCG678_20780 PF02417 Chromate transporter AVCG678_20785 PF00166 Chaperonin 10 Kd subunit AVCG678_20790 PF00118 TCP-1/cpn60 chaperonin family AVCG678_20805 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG678_20805 PF01968 Hydantoinase/oxoprolinase AVCG678_20810 PF08402 TOBE domain AVCG678_20810 PF00005 ABC transporter AVCG678_20820 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20825 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20830 PF02219 Methylenetetrahydrofolate reductase AVCG678_20835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG678_20840 PF03435 Saccharopine dehydrogenase NADP binding domain AVCG678_20840 PF16653 Saccharopine dehydrogenase C-terminal domain AVCG678_20845 PF02785 Biotin carboxylase C-terminal domain AVCG678_20845 PF00289 Biotin carboxylase, N-terminal domain AVCG678_20845 PF00364 Biotin-requiring enzyme AVCG678_20845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_20850 PF02682 Carboxyltransferase domain, subdomain C and D AVCG678_20855 PF07286 Protein of unknown function (DUF1445) AVCG678_20860 PF03746 LamB/YcsF family AVCG678_20865 PF01566 Natural resistance-associated macrophage protein AVCG678_20870 PF07729 FCD domain AVCG678_20870 PF00392 Bacterial regulatory proteins, gntR family AVCG678_20875 PF01037 Lrp/AsnC ligand binding domain AVCG678_20880 PF00291 Pyridoxal-phosphate dependent enzyme AVCG678_20895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_20900 PF00171 Aldehyde dehydrogenase family AVCG678_20905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_20905 PF03466 LysR substrate binding domain AVCG678_20910 PF03746 LamB/YcsF family AVCG678_20915 PF00364 Biotin-requiring enzyme AVCG678_20920 PF02785 Biotin carboxylase C-terminal domain AVCG678_20920 PF00289 Biotin carboxylase, N-terminal domain AVCG678_20920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_20930 PF02626 Carboxyltransferase domain, subdomain A and B AVCG678_20940 PF00005 ABC transporter AVCG678_20940 PF08402 TOBE domain AVCG678_20945 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_20970 PF00005 ABC transporter AVCG678_20970 PF08402 TOBE domain AVCG678_20975 PF01522 Polysaccharide deacetylase AVCG678_20985 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG678_20985 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG678_20995 PF01425 Amidase AVCG678_21000 PF01037 Lrp/AsnC ligand binding domain AVCG678_21005 PF01266 FAD dependent oxidoreductase AVCG678_21010 PF00916 Sulfate permease family AVCG678_21010 PF01740 STAS domain AVCG678_21015 PF14824 Sirohaem biosynthesis protein central AVCG678_21015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG678_21015 PF10414 Sirohaem synthase dimerisation region AVCG678_21020 PF04324 BFD-like [2Fe-2S] binding domain AVCG678_21020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG678_21020 PF00384 Molybdopterin oxidoreductase AVCG678_21020 PF01568 Molydopterin dinucleotide binding domain AVCG678_21030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVCG678_21030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVCG678_21030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_21030 PF18267 Rubredoxin NAD+ reductase C-terminal domain AVCG678_21030 PF04324 BFD-like [2Fe-2S] binding domain AVCG678_21035 PF00005 ABC transporter AVCG678_21040 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21055 PF03861 ANTAR domain AVCG678_21055 PF08376 Nitrate and nitrite sensing AVCG678_21075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_21075 PF03466 LysR substrate binding domain AVCG678_21080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_21080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_21080 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_21085 PF02515 CoA-transferase family III AVCG678_21095 PF03576 Peptidase family S58 AVCG678_21100 PF01063 Amino-transferase class IV AVCG678_21105 PF00144 Beta-lactamase AVCG678_21110 PF01244 Membrane dipeptidase (Peptidase family M19) AVCG678_21115 PF01964 Radical SAM ThiC family AVCG678_21115 PF13667 ThiC-associated domain AVCG678_21120 PF01266 FAD dependent oxidoreductase AVCG678_21130 PF05690 Thiazole biosynthesis protein ThiG AVCG678_21135 PF02581 Thiamine monophosphate synthase AVCG678_21175 PF02563 Polysaccharide biosynthesis/export protein AVCG678_21180 PF00069 Protein kinase domain AVCG678_21190 PF14331 ImcF-related N-terminal domain AVCG678_21190 PF06744 Type VI secretion protein IcmF C-terminal AVCG678_21190 PF06761 Intracellular multiplication and human macrophage-killing AVCG678_21195 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVCG678_21195 PF00691 OmpA family AVCG678_21200 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AVCG678_21215 PF05947 Type VI secretion system, TssF AVCG678_21235 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AVCG678_21240 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AVCG678_21250 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_21250 PF17871 AAA lid domain AVCG678_21250 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG678_21250 PF07724 AAA domain (Cdc48 subfamily) AVCG678_21270 PF07549 SecD/SecF GG Motif AVCG678_21270 PF02355 Protein export membrane protein AVCG678_21280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_21280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_21285 PF00296 Luciferase-like monooxygenase AVCG678_21295 PF01758 Sodium Bile acid symporter family AVCG678_21300 PF03960 ArsC family AVCG678_21305 PF03358 NADPH-dependent FMN reductase AVCG678_21315 PF00072 Response regulator receiver domain AVCG678_21315 PF00486 Transcriptional regulatory protein, C terminal AVCG678_21320 PF13492 GAF domain AVCG678_21320 PF02702 Osmosensitive K+ channel His kinase sensor domain AVCG678_21320 PF13493 Domain of unknown function (DUF4118) AVCG678_21320 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_21325 PF02669 K+-transporting ATPase, c chain AVCG678_21335 PF03814 Potassium-transporting ATPase A subunit AVCG678_21350 PF16124 RecQ zinc-binding AVCG678_21350 PF00270 DEAD/DEAH box helicase AVCG678_21350 PF09382 RQC domain AVCG678_21350 PF00570 HRDC domain AVCG678_21350 PF00271 Helicase conserved C-terminal domain AVCG678_21355 PF01494 FAD binding domain AVCG678_21360 PF01266 FAD dependent oxidoreductase AVCG678_21365 PF01168 Alanine racemase, N-terminal domain AVCG678_21365 PF00842 Alanine racemase, C-terminal domain AVCG678_21370 PF01037 Lrp/AsnC ligand binding domain AVCG678_21375 PF07729 FCD domain AVCG678_21375 PF00392 Bacterial regulatory proteins, gntR family AVCG678_21385 PF12697 Alpha/beta hydrolase family AVCG678_21390 PF01613 Flavin reductase like domain AVCG678_21395 PF00296 Luciferase-like monooxygenase AVCG678_21400 PF00171 Aldehyde dehydrogenase family AVCG678_21410 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21415 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21420 PF00005 ABC transporter AVCG678_21420 PF08402 TOBE domain AVCG678_21425 PF00171 Aldehyde dehydrogenase family AVCG678_21435 PF05025 RbsD / FucU transport protein family AVCG678_21440 PF00248 Aldo/keto reductase family AVCG678_21445 PF02653 Branched-chain amino acid transport system / permease component AVCG678_21450 PF02653 Branched-chain amino acid transport system / permease component AVCG678_21455 PF00005 ABC transporter AVCG678_21460 PF13407 Periplasmic binding protein domain AVCG678_21465 PF00465 Iron-containing alcohol dehydrogenase AVCG678_21470 PF00392 Bacterial regulatory proteins, gntR family AVCG678_21470 PF07729 FCD domain AVCG678_21475 PF08666 SAF domain AVCG678_21475 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AVCG678_21490 PF00465 Iron-containing alcohol dehydrogenase AVCG678_21495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_21495 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_21500 PF00072 Response regulator receiver domain AVCG678_21500 PF00486 Transcriptional regulatory protein, C terminal AVCG678_21510 PF03401 Tripartite tricarboxylate transporter family receptor AVCG678_21520 PF01970 Tripartite tricarboxylate transporter TctA family AVCG678_21535 PF02803 Thiolase, C-terminal domain AVCG678_21535 PF00108 Thiolase, N-terminal domain AVCG678_21540 PF01144 Coenzyme A transferase AVCG678_21545 PF01144 Coenzyme A transferase AVCG678_21550 PF09339 IclR helix-turn-helix domain AVCG678_21550 PF01614 Bacterial transcriptional regulator AVCG678_21560 PF01494 FAD binding domain AVCG678_21565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_21565 PF03466 LysR substrate binding domain AVCG678_21570 PF00561 alpha/beta hydrolase fold AVCG678_21575 PF02627 Carboxymuconolactone decarboxylase family AVCG678_21580 PF00775 Dioxygenase AVCG678_21580 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AVCG678_21585 PF00775 Dioxygenase AVCG678_21590 PF10397 Adenylosuccinate lyase C-terminus AVCG678_21590 PF00206 Lyase AVCG678_21595 PF00107 Zinc-binding dehydrogenase AVCG678_21600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVCG678_21600 PF17854 FtsK alpha domain AVCG678_21600 PF09397 Ftsk gamma domain AVCG678_21600 PF01580 FtsK/SpoIIIE family AVCG678_21605 PF00005 ABC transporter AVCG678_21605 PF08402 TOBE domain AVCG678_21610 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21620 PF00924 Mechanosensitive ion channel AVCG678_21625 PF07886 BA14K-like protein AVCG678_21635 PF00005 ABC transporter AVCG678_21635 PF00664 ABC transporter transmembrane region AVCG678_21640 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_21640 PF16527 Two-component sensor protein CpxA, periplasmic domain AVCG678_21640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_21640 PF00672 HAMP domain AVCG678_21645 PF00072 Response regulator receiver domain AVCG678_21645 PF00486 Transcriptional regulatory protein, C terminal AVCG678_21660 PF02104 SURF1 family AVCG678_21665 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVCG678_21670 PF00510 Cytochrome c oxidase subunit III AVCG678_21675 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVCG678_21680 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVCG678_21680 PF06481 COX Aromatic Rich Motif AVCG678_21685 PF04542 Sigma-70 region 2 AVCG678_21685 PF08281 Sigma-70, region 4 AVCG678_21695 PF01027 Inhibitor of apoptosis-promoting Bax1 AVCG678_21700 PF00127 Copper binding proteins, plastocyanin/azurin family AVCG678_21710 PF00722 Glycosyl hydrolases family 16 AVCG678_21710 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AVCG678_21715 PF00375 Sodium:dicarboxylate symporter family AVCG678_21720 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_21720 PF02743 Cache domain AVCG678_21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_21725 PF02954 Bacterial regulatory protein, Fis family AVCG678_21725 PF00072 Response regulator receiver domain AVCG678_21725 PF00158 Sigma-54 interaction domain AVCG678_21730 PF17938 Tetracyclin repressor-like, C-terminal domain AVCG678_21730 PF00440 Bacterial regulatory proteins, tetR family AVCG678_21745 PF00480 ROK family AVCG678_21750 PF01979 Amidohydrolase family AVCG678_21755 PF01380 SIS domain AVCG678_21760 PF00392 Bacterial regulatory proteins, gntR family AVCG678_21760 PF07702 UTRA domain AVCG678_21770 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21775 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21780 PF01547 Bacterial extracellular solute-binding protein AVCG678_21785 PF03459 TOBE domain AVCG678_21785 PF17912 MalK OB fold domain AVCG678_21785 PF00005 ABC transporter AVCG678_21790 PF01168 Alanine racemase, N-terminal domain AVCG678_21790 PF14031 Putative serine dehydratase domain AVCG678_21795 PF07364 Metallopeptidase family M81 AVCG678_21795 PF07171 MlrC C-terminus AVCG678_21810 PF01418 Helix-turn-helix domain, rpiR family AVCG678_21810 PF02685 Glucokinase AVCG678_21810 PF01380 SIS domain AVCG678_21820 PF00728 Glycosyl hydrolase family 20, catalytic domain AVCG678_21820 PF02838 Glycosyl hydrolase family 20, domain 2 AVCG678_21830 PF07690 Major Facilitator Superfamily AVCG678_21835 PF03932 CutC family AVCG678_21840 PF03061 Thioesterase superfamily AVCG678_21845 PF00440 Bacterial regulatory proteins, tetR family AVCG678_21850 PF14310 Fibronectin type III-like domain AVCG678_21850 PF00933 Glycosyl hydrolase family 3 N terminal domain AVCG678_21850 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVCG678_21850 PF07691 PA14 domain AVCG678_21855 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_21855 PF08521 Two-component sensor kinase N-terminal AVCG678_21855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_21860 PF00072 Response regulator receiver domain AVCG678_21860 PF00486 Transcriptional regulatory protein, C terminal AVCG678_21875 PF01261 Xylose isomerase-like TIM barrel AVCG678_21880 PF00596 Class II Aldolase and Adducin N-terminal domain AVCG678_21885 PF08220 DeoR-like helix-turn-helix domain AVCG678_21885 PF00455 DeoR C terminal sensor domain AVCG678_21890 PF13407 Periplasmic binding protein domain AVCG678_21895 PF00005 ABC transporter AVCG678_21900 PF02653 Branched-chain amino acid transport system / permease component AVCG678_21905 PF02653 Branched-chain amino acid transport system / permease component AVCG678_21910 PF05336 L-rhamnose mutarotase AVCG678_21920 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG678_21925 PF03707 Bacterial signalling protein N terminal repeat AVCG678_21925 PF00563 EAL domain AVCG678_21925 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_21930 PF01177 Asp/Glu/Hydantoin racemase AVCG678_21935 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21940 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_21950 PF00005 ABC transporter AVCG678_21950 PF08402 TOBE domain AVCG678_21970 PF02245 Methylpurine-DNA glycosylase (MPG) AVCG678_21975 PF00005 ABC transporter AVCG678_21980 PF12704 MacB-like periplasmic core domain AVCG678_21980 PF02687 FtsX-like permease family AVCG678_21990 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AVCG678_21995 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AVCG678_22000 PF13614 AAA domain AVCG678_22005 PF07506 RepB plasmid partitioning protein AVCG678_22005 PF02195 ParB-like nuclease domain AVCG678_22010 PF11800 Replication protein C C-terminal region AVCG678_22010 PF03428 Replication protein C N-terminal domain AVCG678_22020 PF17158 Membrane-associated sensor, integral membrane domain AVCG678_22020 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_22025 PF00589 Phage integrase family AVCG678_22045 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_22045 PF00107 Zinc-binding dehydrogenase AVCG678_22050 PF03737 Aldolase/RraA AVCG678_22055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG678_22055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_22065 PF03401 Tripartite tricarboxylate transporter family receptor AVCG678_22075 PF01970 Tripartite tricarboxylate transporter TctA family AVCG678_22080 PF01070 FMN-dependent dehydrogenase AVCG678_22095 PF00107 Zinc-binding dehydrogenase AVCG678_22095 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_22100 PF00171 Aldehyde dehydrogenase family AVCG678_22105 PF12146 Serine aminopeptidase, S33 AVCG678_22110 PF07690 Major Facilitator Superfamily AVCG678_22115 PF00106 short chain dehydrogenase AVCG678_22120 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG678_22120 PF00970 Oxidoreductase FAD-binding domain AVCG678_22120 PF00175 Oxidoreductase NAD-binding domain AVCG678_22125 PF00866 Ring hydroxylating beta subunit AVCG678_22130 PF00355 Rieske [2Fe-2S] domain AVCG678_22130 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVCG678_22135 PF00775 Dioxygenase AVCG678_22135 PF04444 Catechol dioxygenase N terminus AVCG678_22140 PF02426 Muconolactone delta-isomerase AVCG678_22145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVCG678_22145 PF13378 Enolase C-terminal domain-like AVCG678_22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_22150 PF03466 LysR substrate binding domain AVCG678_22155 PF13358 DDE superfamily endonuclease AVCG678_22165 PF00296 Luciferase-like monooxygenase AVCG678_22195 PF01850 PIN domain AVCG678_22205 PF07756 Protein of unknown function (DUF1612) AVCG678_22205 PF11972 HTH DNA binding domain AVCG678_22240 PF00730 HhH-GPD superfamily base excision DNA repair protein AVCG678_22240 PF02805 Metal binding domain of Ada AVCG678_22240 PF12833 Helix-turn-helix domain AVCG678_22240 PF06029 AlkA N-terminal domain AVCG678_22245 PF05544 Proline racemase AVCG678_22250 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22255 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22260 PF00571 CBS domain AVCG678_22260 PF00005 ABC transporter AVCG678_22270 PF01266 FAD dependent oxidoreductase AVCG678_22275 PF00171 Aldehyde dehydrogenase family AVCG678_22280 PF00701 Dihydrodipicolinate synthetase family AVCG678_22285 PF00392 Bacterial regulatory proteins, gntR family AVCG678_22285 PF07729 FCD domain AVCG678_22290 PF07729 FCD domain AVCG678_22290 PF00392 Bacterial regulatory proteins, gntR family AVCG678_22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_22300 PF03466 LysR substrate binding domain AVCG678_22310 PF00285 Citrate synthase, C-terminal domain AVCG678_22325 PF01970 Tripartite tricarboxylate transporter TctA family AVCG678_22345 PF02515 CoA-transferase family III AVCG678_22360 PF00392 Bacterial regulatory proteins, gntR family AVCG678_22360 PF07729 FCD domain AVCG678_22370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVCG678_22380 PF00892 EamA-like transporter family AVCG678_22385 PF00501 AMP-binding enzyme AVCG678_22385 PF13193 AMP-binding enzyme C-terminal domain AVCG678_22385 PF00668 Condensation domain AVCG678_22385 PF00550 Phosphopantetheine attachment site AVCG678_22390 PF01361 Tautomerase enzyme AVCG678_22395 PF04227 Indigoidine synthase A like protein AVCG678_22400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVCG678_22420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_22420 PF03466 LysR substrate binding domain AVCG678_22470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_22470 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_22470 PF16527 Two-component sensor protein CpxA, periplasmic domain AVCG678_22470 PF00672 HAMP domain AVCG678_22475 PF00072 Response regulator receiver domain AVCG678_22475 PF00486 Transcriptional regulatory protein, C terminal AVCG678_22480 PF02321 Outer membrane efflux protein AVCG678_22485 PF13533 Biotin-lipoyl like AVCG678_22490 PF00873 AcrB/AcrD/AcrF family AVCG678_22495 PF07687 Peptidase dimerisation domain AVCG678_22495 PF01546 Peptidase family M20/M25/M40 AVCG678_22505 PF00294 pfkB family carbohydrate kinase AVCG678_22515 PF02126 Phosphotriesterase family AVCG678_22520 PF02653 Branched-chain amino acid transport system / permease component AVCG678_22525 PF00005 ABC transporter AVCG678_22535 PF00356 Bacterial regulatory proteins, lacI family AVCG678_22550 PF01026 TatD related DNase AVCG678_22555 PF02653 Branched-chain amino acid transport system / permease component AVCG678_22560 PF02653 Branched-chain amino acid transport system / permease component AVCG678_22565 PF00005 ABC transporter AVCG678_22575 PF14031 Putative serine dehydratase domain AVCG678_22580 PF01979 Amidohydrolase family AVCG678_22580 PF13382 Adenine deaminase C-terminal domain AVCG678_22590 PF00795 Carbon-nitrogen hydrolase AVCG678_22595 PF00005 ABC transporter AVCG678_22595 PF08402 TOBE domain AVCG678_22600 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22605 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22625 PF13817 IS66 C-terminal element AVCG678_22625 PF03050 Transposase IS66 family AVCG678_22625 PF13005 zinc-finger binding domain of transposase IS66 AVCG678_22625 PF13007 Transposase C of IS166 homeodomain AVCG678_22640 PF00067 Cytochrome P450 AVCG678_22645 PF13649 Methyltransferase domain AVCG678_22655 PF00685 Sulfotransferase domain AVCG678_22670 PF02223 Thymidylate kinase AVCG678_22675 PF00156 Phosphoribosyl transferase domain AVCG678_22690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_22695 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22700 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22700 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_22705 PF00005 ABC transporter AVCG678_22705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_22710 PF00005 ABC transporter AVCG678_22710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_22715 PF00155 Aminotransferase class I and II AVCG678_22720 PF03466 LysR substrate binding domain AVCG678_22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_22725 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVCG678_22730 PF02441 Flavoprotein AVCG678_22735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_22745 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22750 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_22750 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_22755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_22755 PF00005 ABC transporter AVCG678_22760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_22760 PF00005 ABC transporter AVCG678_22770 PF01979 Amidohydrolase family AVCG678_22775 PF01546 Peptidase family M20/M25/M40 AVCG678_22780 PF00221 Aromatic amino acid lyase AVCG678_22795 PF05762 VWA domain containing CoxE-like protein AVCG678_22810 PF07728 AAA domain (dynein-related subfamily) AVCG678_22815 PF00709 Adenylosuccinate synthetase AVCG678_22845 PF04717 Type VI secretion system, phage-baseplate injector AVCG678_22890 PF00665 Integrase core domain AVCG678_22890 PF13936 Helix-turn-helix domain AVCG678_22905 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVCG678_22905 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVCG678_22910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG678_22910 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVCG678_22915 PF00723 Glycosyl hydrolases family 15 AVCG678_22915 PF09137 Glucodextranase, domain N AVCG678_22920 PF00392 Bacterial regulatory proteins, gntR family AVCG678_22920 PF00155 Aminotransferase class I and II AVCG678_22930 PF00795 Carbon-nitrogen hydrolase AVCG678_22945 PF00586 AIR synthase related protein, N-terminal domain AVCG678_22945 PF02769 AIR synthase related protein, C-terminal domain AVCG678_22950 PF00534 Glycosyl transferases group 1 AVCG678_22950 PF13439 Glycosyltransferase Family 4 AVCG678_22975 PF00384 Molybdopterin oxidoreductase AVCG678_23000 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23010 PF08402 TOBE domain AVCG678_23010 PF00005 ABC transporter AVCG678_23015 PF00440 Bacterial regulatory proteins, tetR family AVCG678_23015 PF17938 Tetracyclin repressor-like, C-terminal domain AVCG678_23020 PF00561 alpha/beta hydrolase fold AVCG678_23025 PF01613 Flavin reductase like domain AVCG678_23035 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23040 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23045 PF13416 Bacterial extracellular solute-binding protein AVCG678_23050 PF08402 TOBE domain AVCG678_23050 PF00005 ABC transporter AVCG678_23060 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23070 PF00392 Bacterial regulatory proteins, gntR family AVCG678_23070 PF07729 FCD domain AVCG678_23080 PF08753 NikR C terminal nickel binding domain AVCG678_23080 PF01402 Ribbon-helix-helix protein, copG family AVCG678_23085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_23090 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23095 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23100 PF00005 ABC transporter AVCG678_23105 PF00005 ABC transporter AVCG678_23115 PF13545 Crp-like helix-turn-helix domain AVCG678_23115 PF00027 Cyclic nucleotide-binding domain AVCG678_23125 PF01032 FecCD transport family AVCG678_23130 PF00005 ABC transporter AVCG678_23140 PF02630 SCO1/SenC AVCG678_23145 PF01965 DJ-1/PfpI family AVCG678_23150 PF06463 Molybdenum Cofactor Synthesis C AVCG678_23150 PF04055 Radical SAM superfamily AVCG678_23155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_23160 PF00037 4Fe-4S binding domain AVCG678_23160 PF11953 Domain of unknown function (DUF3470) AVCG678_23165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG678_23165 PF00384 Molybdopterin oxidoreductase AVCG678_23165 PF01568 Molydopterin dinucleotide binding domain AVCG678_23170 PF07883 Cupin domain AVCG678_23170 PF12833 Helix-turn-helix domain AVCG678_23175 PF14525 AraC-binding-like domain AVCG678_23180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_23180 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG678_23180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_23190 PF00563 EAL domain AVCG678_23190 PF03707 Bacterial signalling protein N terminal repeat AVCG678_23190 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_23195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_23195 PF13426 PAS domain AVCG678_23195 PF08447 PAS fold AVCG678_23215 PF00158 Sigma-54 interaction domain AVCG678_23215 PF02954 Bacterial regulatory protein, Fis family AVCG678_23215 PF01590 GAF domain AVCG678_23220 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_23220 PF00107 Zinc-binding dehydrogenase AVCG678_23230 PF03737 Aldolase/RraA AVCG678_23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_23235 PF03466 LysR substrate binding domain AVCG678_23240 PF00364 Biotin-requiring enzyme AVCG678_23255 PF02626 Carboxyltransferase domain, subdomain A and B AVCG678_23260 PF03746 LamB/YcsF family AVCG678_23265 PF00155 Aminotransferase class I and II AVCG678_23270 PF03466 LysR substrate binding domain AVCG678_23270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_23275 PF00106 short chain dehydrogenase AVCG678_23280 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23285 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23290 PF00005 ABC transporter AVCG678_23295 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_23310 PF02913 FAD linked oxidases, C-terminal domain AVCG678_23310 PF01565 FAD binding domain AVCG678_23315 PF02754 Cysteine-rich domain AVCG678_23315 PF13183 4Fe-4S dicluster domain AVCG678_23315 PF02665 Nitrate reductase gamma subunit AVCG678_23320 PF02913 FAD linked oxidases, C-terminal domain AVCG678_23320 PF01565 FAD binding domain AVCG678_23340 PF00171 Aldehyde dehydrogenase family AVCG678_23345 PF00501 AMP-binding enzyme AVCG678_23345 PF13193 AMP-binding enzyme C-terminal domain AVCG678_23355 PF01039 Carboxyl transferase domain AVCG678_23360 PF00378 Enoyl-CoA hydratase/isomerase AVCG678_23365 PF00289 Biotin carboxylase, N-terminal domain AVCG678_23365 PF02785 Biotin carboxylase C-terminal domain AVCG678_23365 PF00364 Biotin-requiring enzyme AVCG678_23365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG678_23370 PF00682 HMGL-like AVCG678_23380 PF00202 Aminotransferase class-III AVCG678_23395 PF03167 Uracil DNA glycosylase superfamily AVCG678_23425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG678_23425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG678_23430 PF01261 Xylose isomerase-like TIM barrel AVCG678_23435 PF00480 ROK family AVCG678_23440 PF08402 TOBE domain AVCG678_23440 PF00005 ABC transporter AVCG678_23445 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23460 PF01074 Glycosyl hydrolases family 38 N-terminal domain AVCG678_23460 PF09261 Alpha mannosidase middle domain AVCG678_23460 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain AVCG678_23460 PF07748 Glycosyl hydrolases family 38 C-terminal domain AVCG678_23460 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 AVCG678_23465 PF00775 Dioxygenase AVCG678_23465 PF04444 Catechol dioxygenase N terminus AVCG678_23480 PF00465 Iron-containing alcohol dehydrogenase AVCG678_23485 PF01494 FAD binding domain AVCG678_23495 PF00005 ABC transporter AVCG678_23495 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG678_23500 PF00005 ABC transporter AVCG678_23505 PF02653 Branched-chain amino acid transport system / permease component AVCG678_23510 PF02653 Branched-chain amino acid transport system / permease component AVCG678_23510 PF11862 Domain of unknown function (DUF3382) AVCG678_23525 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG678_23545 PF01494 FAD binding domain AVCG678_23550 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG678_23575 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_23575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_23580 PF07690 Major Facilitator Superfamily AVCG678_23590 PF01144 Coenzyme A transferase AVCG678_23605 PF17645 Arylmalonate decarboxylase AVCG678_23610 PF01614 Bacterial transcriptional regulator AVCG678_23610 PF09339 IclR helix-turn-helix domain AVCG678_23620 PF01613 Flavin reductase like domain AVCG678_23625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG678_23625 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG678_23635 PF01614 Bacterial transcriptional regulator AVCG678_23635 PF09339 IclR helix-turn-helix domain AVCG678_23640 PF01042 Endoribonuclease L-PSP AVCG678_23645 PF01266 FAD dependent oxidoreductase AVCG678_23650 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVCG678_23660 PF03466 LysR substrate binding domain AVCG678_23660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_23665 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23670 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23675 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_23680 PF01425 Amidase AVCG678_23685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVCG678_23690 PF01022 Bacterial regulatory protein, arsR family AVCG678_23695 PF00268 Ribonucleotide reductase, small chain AVCG678_23700 PF08343 Ribonucleotide reductase N-terminal AVCG678_23700 PF00317 Ribonucleotide reductase, all-alpha domain AVCG678_23700 PF02867 Ribonucleotide reductase, barrel domain AVCG678_23705 PF07972 NrdI Flavodoxin like AVCG678_23710 PF00462 Glutaredoxin AVCG678_23725 PF07690 Major Facilitator Superfamily AVCG678_23735 PF00356 Bacterial regulatory proteins, lacI family AVCG678_23745 PF00005 ABC transporter AVCG678_23750 PF02653 Branched-chain amino acid transport system / permease component AVCG678_23755 PF00106 short chain dehydrogenase AVCG678_23760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG678_23760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG678_23765 PF02661 Fic/DOC family AVCG678_23765 PF12728 Helix-turn-helix domain AVCG678_23770 PF00698 Acyl transferase domain AVCG678_23770 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_23770 PF08659 KR domain AVCG678_23770 PF00550 Phosphopantetheine attachment site AVCG678_23770 PF14765 Polyketide synthase dehydratase AVCG678_23770 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_23770 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_23770 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_23780 PF00294 pfkB family carbohydrate kinase AVCG678_23785 PF01380 SIS domain AVCG678_23785 PF01418 Helix-turn-helix domain, rpiR family AVCG678_23790 PF02653 Branched-chain amino acid transport system / permease component AVCG678_23795 PF00005 ABC transporter AVCG678_23800 PF13407 Periplasmic binding protein domain AVCG678_23805 PF01261 Xylose isomerase-like TIM barrel AVCG678_23810 PF00294 pfkB family carbohydrate kinase AVCG678_23820 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23825 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23835 PF00005 ABC transporter AVCG678_23835 PF17912 MalK OB fold domain AVCG678_23835 PF03459 TOBE domain AVCG678_23850 PF00392 Bacterial regulatory proteins, gntR family AVCG678_23850 PF07729 FCD domain AVCG678_23865 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23870 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23875 PF07470 Glycosyl Hydrolase Family 88 AVCG678_23880 PF03459 TOBE domain AVCG678_23880 PF17912 MalK OB fold domain AVCG678_23880 PF00005 ABC transporter AVCG678_23890 PF01547 Bacterial extracellular solute-binding protein AVCG678_23900 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG678_23905 PF00005 ABC transporter AVCG678_23905 PF08402 TOBE domain AVCG678_23915 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23920 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23930 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG678_23930 PF00480 ROK family AVCG678_23945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_23945 PF00005 ABC transporter AVCG678_23950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_23955 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23960 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_23960 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_23965 PF04951 D-aminopeptidase AVCG678_23970 PF01112 Asparaginase AVCG678_23985 PF02203 Tar ligand binding domain homologue AVCG678_23985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_23985 PF00672 HAMP domain AVCG678_24010 PF01554 MatE AVCG678_24015 PF00501 AMP-binding enzyme AVCG678_24015 PF13193 AMP-binding enzyme C-terminal domain AVCG678_24015 PF00550 Phosphopantetheine attachment site AVCG678_24015 PF00668 Condensation domain AVCG678_24020 PF00296 Luciferase-like monooxygenase AVCG678_24025 PF00698 Acyl transferase domain AVCG678_24025 PF00668 Condensation domain AVCG678_24025 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_24025 PF00550 Phosphopantetheine attachment site AVCG678_24025 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_24025 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_24030 PF00501 AMP-binding enzyme AVCG678_24035 PF13193 AMP-binding enzyme C-terminal domain AVCG678_24035 PF00550 Phosphopantetheine attachment site AVCG678_24035 PF07993 Male sterility protein AVCG678_24035 PF00501 AMP-binding enzyme AVCG678_24035 PF00668 Condensation domain AVCG678_24040 PF13649 Methyltransferase domain AVCG678_24045 PF00202 Aminotransferase class-III AVCG678_24045 PF00501 AMP-binding enzyme AVCG678_24045 PF13193 AMP-binding enzyme C-terminal domain AVCG678_24045 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_24045 PF00668 Condensation domain AVCG678_24045 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_24045 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_24045 PF00550 Phosphopantetheine attachment site AVCG678_24065 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG678_24065 PF00668 Condensation domain AVCG678_24065 PF00698 Acyl transferase domain AVCG678_24065 PF16197 Ketoacyl-synthetase C-terminal extension AVCG678_24065 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG678_24065 PF00550 Phosphopantetheine attachment site AVCG678_24070 PF00668 Condensation domain AVCG678_24070 PF00550 Phosphopantetheine attachment site AVCG678_24070 PF00501 AMP-binding enzyme AVCG678_24070 PF13193 AMP-binding enzyme C-terminal domain AVCG678_24075 PF00668 Condensation domain AVCG678_24075 PF13193 AMP-binding enzyme C-terminal domain AVCG678_24075 PF07993 Male sterility protein AVCG678_24075 PF00550 Phosphopantetheine attachment site AVCG678_24075 PF00501 AMP-binding enzyme AVCG678_24075 PF00550 Phosphopantetheine attachment site AVCG678_24075 PF13193 AMP-binding enzyme C-terminal domain AVCG678_24075 PF07993 Male sterility protein AVCG678_24075 PF00668 Condensation domain AVCG678_24075 PF00501 AMP-binding enzyme AVCG678_24090 PF07715 TonB-dependent Receptor Plug Domain AVCG678_24095 PF01497 Periplasmic binding protein AVCG678_24100 PF01032 FecCD transport family AVCG678_24105 PF01032 FecCD transport family AVCG678_24110 PF00005 ABC transporter AVCG678_24125 PF00873 AcrB/AcrD/AcrF family AVCG678_24140 PF02630 SCO1/SenC AVCG678_24150 PF00440 Bacterial regulatory proteins, tetR family AVCG678_24185 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24190 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24190 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_24195 PF00005 ABC transporter AVCG678_24195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_24200 PF08220 DeoR-like helix-turn-helix domain AVCG678_24200 PF00455 DeoR C terminal sensor domain AVCG678_24205 PF01546 Peptidase family M20/M25/M40 AVCG678_24240 PF02195 ParB-like nuclease domain AVCG678_24240 PF07506 RepB plasmid partitioning protein AVCG678_24245 PF03428 Replication protein C N-terminal domain AVCG678_24245 PF11800 Replication protein C C-terminal region AVCG678_24405 PF02653 Branched-chain amino acid transport system / permease component AVCG678_24410 PF02653 Branched-chain amino acid transport system / permease component AVCG678_24420 PF00171 Aldehyde dehydrogenase family AVCG678_24425 PF04030 D-arabinono-1,4-lactone oxidase AVCG678_24425 PF01565 FAD binding domain AVCG678_24430 PF00296 Luciferase-like monooxygenase AVCG678_24435 PF01590 GAF domain AVCG678_24435 PF00158 Sigma-54 interaction domain AVCG678_24435 PF02954 Bacterial regulatory protein, Fis family AVCG678_24440 PF01613 Flavin reductase like domain AVCG678_24445 PF01266 FAD dependent oxidoreductase AVCG678_24455 PF00005 ABC transporter AVCG678_24455 PF08402 TOBE domain AVCG678_24460 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24465 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_24465 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24470 PF00005 ABC transporter AVCG678_24470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_24475 PF00144 Beta-lactamase AVCG678_24480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_24485 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24490 PF01266 FAD dependent oxidoreductase AVCG678_24510 PF02653 Branched-chain amino acid transport system / permease component AVCG678_24515 PF02653 Branched-chain amino acid transport system / permease component AVCG678_24520 PF00005 ABC transporter AVCG678_24525 PF00356 Bacterial regulatory proteins, lacI family AVCG678_24530 PF02126 Phosphotriesterase family AVCG678_24535 PF13936 Helix-turn-helix domain AVCG678_24535 PF00665 Integrase core domain AVCG678_24560 PF07690 Major Facilitator Superfamily AVCG678_24565 PF03401 Tripartite tricarboxylate transporter family receptor AVCG678_24570 PF01970 Tripartite tricarboxylate transporter TctA family AVCG678_24580 PF03466 LysR substrate binding domain AVCG678_24580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_24585 PF04909 Amidohydrolase AVCG678_24590 PF04909 Amidohydrolase AVCG678_24595 PF03466 LysR substrate binding domain AVCG678_24595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_24600 PF00375 Sodium:dicarboxylate symporter family AVCG678_24605 PF03737 Aldolase/RraA AVCG678_24625 PF01546 Peptidase family M20/M25/M40 AVCG678_24660 PF01548 Transposase AVCG678_24660 PF02371 Transposase IS116/IS110/IS902 family AVCG678_24685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_24685 PF00005 ABC transporter AVCG678_24690 PF00005 ABC transporter AVCG678_24690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_24695 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_24705 PF00392 Bacterial regulatory proteins, gntR family AVCG678_24705 PF07702 UTRA domain AVCG678_24710 PF01380 SIS domain AVCG678_24715 PF00294 pfkB family carbohydrate kinase AVCG678_24720 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG678_24720 PF01968 Hydantoinase/oxoprolinase AVCG678_24725 PF02538 Hydantoinase B/oxoprolinase AVCG678_24730 PF03447 Homoserine dehydrogenase, NAD binding domain AVCG678_24730 PF01958 Domain of unknown function DUF108 AVCG678_24735 PF00291 Pyridoxal-phosphate dependent enzyme AVCG678_24740 PF00155 Aminotransferase class I and II AVCG678_24760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_24760 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG678_24760 PF01751 Toprim domain AVCG678_24760 PF00204 DNA gyrase B AVCG678_24765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_24765 PF00204 DNA gyrase B AVCG678_24765 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG678_24765 PF01751 Toprim domain AVCG678_24770 PF01527 Transposase AVCG678_24790 PF00392 Bacterial regulatory proteins, gntR family AVCG678_24790 PF07702 UTRA domain AVCG678_24795 PF07687 Peptidase dimerisation domain AVCG678_24795 PF01546 Peptidase family M20/M25/M40 AVCG678_24800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_24805 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24810 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_24810 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_24815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_24815 PF00005 ABC transporter AVCG678_24825 PF00557 Metallopeptidase family M24 AVCG678_24825 PF01321 Creatinase/Prolidase N-terminal domain AVCG678_24830 PF08448 PAS fold AVCG678_24830 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_24830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_24830 PF00072 Response regulator receiver domain AVCG678_24830 PF13188 PAS domain AVCG678_24860 PF03358 NADPH-dependent FMN reductase AVCG678_24870 PF00561 alpha/beta hydrolase fold AVCG678_24890 PF04303 PrpF protein AVCG678_24895 PF03737 Aldolase/RraA AVCG678_24900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG678_24905 PF02585 GlcNAc-PI de-N-acetylase AVCG678_24920 PF00005 ABC transporter AVCG678_24920 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG678_24925 PF00005 ABC transporter AVCG678_24930 PF13458 Periplasmic binding protein AVCG678_24940 PF03466 LysR substrate binding domain AVCG678_24940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_24950 PF13610 DDE domain AVCG678_24965 PF02690 Na+/Pi-cotransporter AVCG678_24985 PF13426 PAS domain AVCG678_24985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_24985 PF08447 PAS fold AVCG678_24990 PF01584 CheW-like domain AVCG678_24995 PF00072 Response regulator receiver domain AVCG678_24995 PF01339 CheB methylesterase AVCG678_25000 PF03705 CheR methyltransferase, all-alpha domain AVCG678_25000 PF01739 CheR methyltransferase, SAM binding domain AVCG678_25005 PF00072 Response regulator receiver domain AVCG678_25005 PF01584 CheW-like domain AVCG678_25005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25005 PF02895 Signal transducing histidine kinase, homodimeric domain AVCG678_25005 PF01627 Hpt domain AVCG678_25015 PF00672 HAMP domain AVCG678_25015 PF00072 Response regulator receiver domain AVCG678_25015 PF01627 Hpt domain AVCG678_25015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25015 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_25025 PF01590 GAF domain AVCG678_25025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25025 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_25025 PF08446 PAS fold AVCG678_25025 PF00360 Phytochrome region AVCG678_25035 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_25035 PF13185 GAF domain AVCG678_25035 PF00563 EAL domain AVCG678_25040 PF03707 Bacterial signalling protein N terminal repeat AVCG678_25040 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_25040 PF00563 EAL domain AVCG678_25060 PF13610 DDE domain AVCG678_25065 PF00072 Response regulator receiver domain AVCG678_25065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25065 PF13426 PAS domain AVCG678_25090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25090 PF00072 Response regulator receiver domain AVCG678_25090 PF13426 PAS domain AVCG678_25105 PF10503 Esterase PHB depolymerase AVCG678_25150 PF13610 DDE domain AVCG678_25155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_25155 PF00672 HAMP domain AVCG678_25170 PF12833 Helix-turn-helix domain AVCG678_25170 PF14525 AraC-binding-like domain AVCG678_25175 PF01609 Transposase DDE domain AVCG678_25190 PF00672 HAMP domain AVCG678_25190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_25205 PF01590 GAF domain AVCG678_25205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25205 PF00360 Phytochrome region AVCG678_25205 PF08446 PAS fold AVCG678_25205 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_25215 PF00672 HAMP domain AVCG678_25215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_25230 PF00989 PAS fold AVCG678_25230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25230 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_25230 PF16736 Single Cache-like AVCG678_25235 PF01339 CheB methylesterase AVCG678_25240 PF01739 CheR methyltransferase, SAM binding domain AVCG678_25240 PF03705 CheR methyltransferase, all-alpha domain AVCG678_25245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_25245 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_25245 PF01627 Hpt domain AVCG678_25245 PF00072 Response regulator receiver domain AVCG678_25245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVCG678_25245 PF00672 HAMP domain AVCG678_25270 PF01381 Helix-turn-helix AVCG678_25305 PF02887 Pyruvate kinase, alpha/beta domain AVCG678_25305 PF00224 Pyruvate kinase, barrel domain AVCG678_25310 PF05161 MOFRL family AVCG678_25310 PF13660 Domain of unknown function (DUF4147) AVCG678_25315 PF00180 Isocitrate/isopropylmalate dehydrogenase AVCG678_25320 PF07690 Major Facilitator Superfamily AVCG678_25325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_25325 PF03466 LysR substrate binding domain AVCG678_25330 PF01202 Shikimate kinase AVCG678_25340 PF00005 ABC transporter AVCG678_25345 PF02653 Branched-chain amino acid transport system / permease component AVCG678_25355 PF01968 Hydantoinase/oxoprolinase AVCG678_25355 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG678_25365 PF00202 Aminotransferase class-III AVCG678_25370 PF00356 Bacterial regulatory proteins, lacI family AVCG678_25425 PF00665 Integrase core domain AVCG678_25425 PF13936 Helix-turn-helix domain AVCG678_25430 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_25435 PF00842 Alanine racemase, C-terminal domain AVCG678_25435 PF01168 Alanine racemase, N-terminal domain AVCG678_25440 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_25445 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_25450 PF00005 ABC transporter AVCG678_25455 PF01965 DJ-1/PfpI family AVCG678_25455 PF12833 Helix-turn-helix domain AVCG678_25470 PF12833 Helix-turn-helix domain AVCG678_25480 PF03472 Autoinducer binding domain AVCG678_25480 PF00196 Bacterial regulatory proteins, luxR family AVCG678_25485 PF06871 TraH_2 AVCG678_25490 PF00795 Carbon-nitrogen hydrolase AVCG678_25495 PF10502 Signal peptidase, peptidase S26 AVCG678_25500 PF17841 BID domain of Bartonella effector protein (Bep) AVCG678_25500 PF01443 Viral (Superfamily 1) RNA helicase AVCG678_25500 PF03389 MobA/MobL family AVCG678_25505 PF07820 TraC-like protein AVCG678_25510 PF06412 Conjugal transfer protein TraD AVCG678_25515 PF02534 Type IV secretory system Conjugative DNA transfer AVCG678_25535 PF06715 Gp5 C-terminal repeat (3 copies) AVCG678_25535 PF04717 Type VI secretion system, phage-baseplate injector AVCG678_25570 PF05406 WGR domain AVCG678_25575 PF00216 Bacterial DNA-binding protein AVCG678_25580 PF05284 Protein of unknown function (DUF736) AVCG678_25590 PF00106 short chain dehydrogenase AVCG678_25605 PF17762 HTH domain found in ParB protein AVCG678_25605 PF02195 ParB-like nuclease domain AVCG678_25610 PF13298 DNA polymerase Ligase (LigD) AVCG678_25610 PF04679 ATP dependent DNA ligase C terminal region AVCG678_25610 PF01068 ATP dependent DNA ligase domain AVCG678_25645 PF00296 Luciferase-like monooxygenase AVCG678_25650 PF07690 Major Facilitator Superfamily AVCG678_25655 PF03466 LysR substrate binding domain AVCG678_25655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_25660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG678_25660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG678_25670 PF00005 ABC transporter AVCG678_25670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_25675 PF00005 ABC transporter AVCG678_25675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_25685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_25690 PF00005 ABC transporter AVCG678_25705 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_25710 PF05544 Proline racemase AVCG678_25715 PF07687 Peptidase dimerisation domain AVCG678_25715 PF01546 Peptidase family M20/M25/M40 AVCG678_25720 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_25725 PF05544 Proline racemase AVCG678_25730 PF07729 FCD domain AVCG678_25730 PF00392 Bacterial regulatory proteins, gntR family AVCG678_25735 PF02615 Malate/L-lactate dehydrogenase AVCG678_25750 PF07687 Peptidase dimerisation domain AVCG678_25750 PF01546 Peptidase family M20/M25/M40 AVCG678_25755 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG678_25780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_25780 PF03466 LysR substrate binding domain AVCG678_25790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_25790 PF03466 LysR substrate binding domain AVCG678_25825 PF01555 DNA methylase AVCG678_25825 PF18273 Type III R-M EcoP15I C-terminal domain AVCG678_25845 PF00004 ATPase family associated with various cellular activities (AAA) AVCG678_25845 PF05362 Lon protease (S16) C-terminal proteolytic domain AVCG678_25845 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVCG678_25850 PF04079 Segregation and condensation complex subunit ScpB AVCG678_25860 PF03743 Bacterial conjugation TrbI-like protein AVCG678_25870 PF03524 Conjugal transfer protein AVCG678_25875 PF04335 VirB8 protein AVCG678_25880 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVCG678_25885 PF10907 Protein of unknown function (DUF2749) AVCG678_25895 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVCG678_25900 PF05101 Type IV secretory pathway, VirB3-like protein AVCG678_25905 PF04956 TrbC/VIRB2 family AVCG678_25910 PF00437 Type II/IV secretion system protein AVCG678_25915 PF00765 Autoinducer synthase AVCG678_25925 PF07506 RepB plasmid partitioning protein AVCG678_25925 PF02195 ParB-like nuclease domain AVCG678_25930 PF11800 Replication protein C C-terminal region AVCG678_25930 PF03428 Replication protein C N-terminal domain AVCG678_25950 PF00589 Phage integrase family AVCG678_25960 PF04079 Segregation and condensation complex subunit ScpB AVCG678_25995 PF02735 Ku70/Ku80 beta-barrel domain AVCG678_26000 PF02735 Ku70/Ku80 beta-barrel domain AVCG678_26005 PF13298 DNA polymerase Ligase (LigD) AVCG678_26005 PF01068 ATP dependent DNA ligase domain AVCG678_26005 PF04679 ATP dependent DNA ligase C terminal region AVCG678_26020 PF16657 Maltogenic Amylase, C-terminal domain AVCG678_26020 PF00128 Alpha amylase, catalytic domain AVCG678_26040 PF08447 PAS fold AVCG678_26040 PF13426 PAS domain AVCG678_26040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG678_26045 PF00216 Bacterial DNA-binding protein AVCG678_26050 PF01022 Bacterial regulatory protein, arsR family AVCG678_26095 PF07886 BA14K-like protein AVCG678_26105 PF06412 Conjugal transfer protein TraD AVCG678_26110 PF07820 TraC-like protein AVCG678_26140 PF00563 EAL domain AVCG678_26140 PF03707 Bacterial signalling protein N terminal repeat AVCG678_26140 PF00990 Diguanylate cyclase, GGDEF domain AVCG678_26145 PF01381 Helix-turn-helix AVCG678_26155 PF13610 DDE domain AVCG678_26250 PF18818 Metallopeptidase superfamily domain AVCG678_26250 PF08401 Domain of unknown function (DUF1738) AVCG678_26250 PF13362 Toprim domain AVCG678_26290 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_26290 PF00589 Phage integrase family AVCG678_26295 PF00589 Phage integrase family AVCG678_26300 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_26300 PF00589 Phage integrase family AVCG678_26315 PF05284 Protein of unknown function (DUF736) AVCG678_26325 PF00216 Bacterial DNA-binding protein AVCG678_26330 PF05406 WGR domain AVCG678_26340 PF02534 Type IV secretory system Conjugative DNA transfer AVCG678_26345 PF06412 Conjugal transfer protein TraD AVCG678_26350 PF07820 TraC-like protein AVCG678_26355 PF01443 Viral (Superfamily 1) RNA helicase AVCG678_26355 PF03389 MobA/MobL family AVCG678_26355 PF17841 BID domain of Bartonella effector protein (Bep) AVCG678_26360 PF10502 Signal peptidase, peptidase S26 AVCG678_26370 PF06871 TraH_2 AVCG678_26385 PF09228 Prokaryotic Transcriptional repressor TraM AVCG678_26390 PF00196 Bacterial regulatory proteins, luxR family AVCG678_26390 PF03472 Autoinducer binding domain AVCG678_26395 PF01168 Alanine racemase, N-terminal domain AVCG678_26395 PF00842 Alanine racemase, C-terminal domain AVCG678_26400 PF01037 Lrp/AsnC ligand binding domain AVCG678_26415 PF08402 TOBE domain AVCG678_26415 PF00005 ABC transporter AVCG678_26420 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26425 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26430 PF00202 Aminotransferase class-III AVCG678_26435 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26440 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26445 PF13416 Bacterial extracellular solute-binding protein AVCG678_26450 PF00005 ABC transporter AVCG678_26450 PF08402 TOBE domain AVCG678_26455 PF00171 Aldehyde dehydrogenase family AVCG678_26460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_26470 PF01266 FAD dependent oxidoreductase AVCG678_26485 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26490 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26495 PF08402 TOBE domain AVCG678_26495 PF00005 ABC transporter AVCG678_26505 PF02538 Hydantoinase B/oxoprolinase AVCG678_26510 PF01968 Hydantoinase/oxoprolinase AVCG678_26510 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG678_26520 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26525 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_26525 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_26530 PF00005 ABC transporter AVCG678_26530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_26540 PF08240 Alcohol dehydrogenase GroES-like domain AVCG678_26540 PF00107 Zinc-binding dehydrogenase AVCG678_26545 PF00171 Aldehyde dehydrogenase family AVCG678_26570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVCG678_26570 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AVCG678_26580 PF13614 AAA domain AVCG678_26600 PF13340 Putative transposase of IS4/5 family (DUF4096) AVCG678_26615 PF13592 Winged helix-turn helix AVCG678_26625 PF02534 Type IV secretory system Conjugative DNA transfer AVCG678_26635 PF03432 Relaxase/Mobilisation nuclease domain AVCG678_26640 PF07328 T-DNA border endonuclease VirD1 AVCG678_26645 PF07015 VirC1 protein AVCG678_26650 PF07181 VirC2 protein AVCG678_26655 PF00072 Response regulator receiver domain AVCG678_26655 PF00486 Transcriptional regulatory protein, C terminal AVCG678_26660 PF00437 Type II/IV secretion system protein AVCG678_26665 PF03743 Bacterial conjugation TrbI-like protein AVCG678_26670 PF03524 Conjugal transfer protein AVCG678_26675 PF04335 VirB8 protein AVCG678_26680 PF17413 Outer membrane lipoprotein virB7 AVCG678_26685 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVCG678_26695 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVCG678_26700 PF05101 Type IV secretory pathway, VirB3-like protein AVCG678_26705 PF04956 TrbC/VIRB2 family AVCG678_26710 PF01464 Transglycosylase SLT domain AVCG678_26730 PF13817 IS66 C-terminal element AVCG678_26730 PF13007 Transposase C of IS166 homeodomain AVCG678_26730 PF13005 zinc-finger binding domain of transposase IS66 AVCG678_26730 PF03050 Transposase IS66 family AVCG678_26770 PF07229 VirE2 AVCG678_26775 PF12189 Single-strand DNA-binding protein AVCG678_26785 PF13340 Putative transposase of IS4/5 family (DUF4096) AVCG678_26805 PF13007 Transposase C of IS166 homeodomain AVCG678_26805 PF13817 IS66 C-terminal element AVCG678_26805 PF03050 Transposase IS66 family AVCG678_26805 PF13005 zinc-finger binding domain of transposase IS66 AVCG678_26810 PF00512 His Kinase A (phospho-acceptor) domain AVCG678_26810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG678_26815 PF00067 Cytochrome P450 AVCG678_26820 PF00589 Phage integrase family AVCG678_26845 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_26845 PF00589 Phage integrase family AVCG678_26855 PF00589 Phage integrase family AVCG678_26855 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_26860 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_26860 PF00589 Phage integrase family AVCG678_26865 PF02899 Phage integrase, N-terminal SAM-like domain AVCG678_26865 PF00589 Phage integrase family AVCG678_26885 PF02027 RolB/RolC glucosidase family AVCG678_26890 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AVCG678_26935 PF00872 Transposase, Mutator family AVCG678_26955 PF01527 Transposase AVCG678_26960 PF01425 Amidase AVCG678_26965 PF01593 Flavin containing amine oxidoreductase AVCG678_26965 PF02027 RolB/RolC glucosidase family AVCG678_27005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_27005 PF04324 BFD-like [2Fe-2S] binding domain AVCG678_27015 PF01266 FAD dependent oxidoreductase AVCG678_27020 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_27025 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_27030 PF08402 TOBE domain AVCG678_27030 PF00005 ABC transporter AVCG678_27035 PF13416 Bacterial extracellular solute-binding protein AVCG678_27040 PF03466 LysR substrate binding domain AVCG678_27040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_27045 PF00005 ABC transporter AVCG678_27045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG678_27050 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG678_27050 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_27055 PF00528 Binding-protein-dependent transport system inner membrane component AVCG678_27060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG678_27070 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG678_27070 PF04324 BFD-like [2Fe-2S] binding domain AVCG678_27085 PF01968 Hydantoinase/oxoprolinase AVCG678_27085 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG678_27090 PF01266 FAD dependent oxidoreductase AVCG678_27095 PF03466 LysR substrate binding domain AVCG678_27095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG678_27100 PF03743 Bacterial conjugation TrbI-like protein AVCG678_27110 PF03524 Conjugal transfer protein AVCG678_27115 PF04335 VirB8 protein AVCG678_27120 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVCG678_27125 PF10907 Protein of unknown function (DUF2749) AVCG678_27135 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVCG678_27140 PF05101 Type IV secretory pathway, VirB3-like protein AVCG678_27145 PF04956 TrbC/VIRB2 family AVCG678_27150 PF00437 Type II/IV secretion system protein AVCG678_27155 PF00765 Autoinducer synthase