locus-tag class description AVCG78_00005 PF00308 Bacterial dnaA protein AVCG78_00005 PF08299 Bacterial dnaA protein helix-turn-helix AVCG78_00005 PF11638 DnaA N-terminal domain AVCG78_00010 PF00892 EamA-like transporter family AVCG78_00015 PF13649 Methyltransferase domain AVCG78_00020 PF06969 HemN C-terminal domain AVCG78_00020 PF04055 Radical SAM superfamily AVCG78_00025 PF01725 Ham1 family AVCG78_00035 PF01138 3' exoribonuclease family, domain 1 AVCG78_00035 PF03725 3' exoribonuclease family, domain 2 AVCG78_00040 PF01628 HrcA protein C terminal domain AVCG78_00045 PF01025 GrpE AVCG78_00050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVCG78_00055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVCG78_00055 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AVCG78_00060 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVCG78_00060 PF04963 Sigma-54 factor, core binding domain AVCG78_00060 PF04552 Sigma-54, DNA binding domain AVCG78_00065 PF00005 ABC transporter AVCG78_00070 PF03968 OstA-like protein AVCG78_00080 PF00216 Bacterial DNA-binding protein AVCG78_00090 PF10672 S-adenosylmethionine-dependent methyltransferase AVCG78_00090 PF02926 THUMP domain AVCG78_00090 PF01170 Putative RNA methylase family UPF0020 AVCG78_00095 PF00588 SpoU rRNA Methylase family AVCG78_00095 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVCG78_00100 PF01252 Signal peptidase (SPase) II AVCG78_00105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVCG78_00105 PF00072 Response regulator receiver domain AVCG78_00105 PF01627 Hpt domain AVCG78_00105 PF00672 HAMP domain AVCG78_00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_00105 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_00115 PF01624 MutS domain I AVCG78_00115 PF05188 MutS domain II AVCG78_00115 PF05192 MutS domain III AVCG78_00115 PF05190 MutS family domain IV AVCG78_00115 PF00488 MutS domain V AVCG78_00120 PF01842 ACT domain AVCG78_00120 PF08335 GlnD PII-uridylyltransferase AVCG78_00120 PF01966 HD domain AVCG78_00125 PF03023 Lipid II flippase MurJ AVCG78_00130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG78_00135 PF00579 tRNA synthetases class I (W and Y) AVCG78_00145 PF01106 NifU-like domain AVCG78_00150 PF00814 Glycoprotease family AVCG78_00160 PF01475 Ferric uptake regulator family AVCG78_00170 PF04055 Radical SAM superfamily AVCG78_00170 PF01938 TRAM domain AVCG78_00170 PF00919 Uncharacterized protein family UPF0004 AVCG78_00175 PF02562 PhoH-like protein AVCG78_00180 PF02130 Uncharacterized protein family UPF0054 AVCG78_00185 PF00571 CBS domain AVCG78_00185 PF03471 Transporter associated domain AVCG78_00190 PF00795 Carbon-nitrogen hydrolase AVCG78_00195 PF01381 Helix-turn-helix AVCG78_00200 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVCG78_00200 PF02772 S-adenosylmethionine synthetase, central domain AVCG78_00200 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVCG78_00205 PF02390 Putative methyltransferase AVCG78_00215 PF00011 Hsp20/alpha crystallin family AVCG78_00220 PF01156 Inosine-uridine preferring nucleoside hydrolase AVCG78_00235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_00235 PF00672 HAMP domain AVCG78_00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_00250 PF00468 Ribosomal protein L34 AVCG78_00255 PF00825 Ribonuclease P AVCG78_00260 PF14849 YidC periplasmic domain AVCG78_00260 PF02096 60Kd inner membrane protein AVCG78_00265 PF01926 50S ribosome-binding GTPase AVCG78_00270 PF02469 Fasciclin domain AVCG78_00285 PF00696 Amino acid kinase family AVCG78_00290 PF00294 pfkB family carbohydrate kinase AVCG78_00305 PF07559 Flagellar basal body protein FlaE AVCG78_00305 PF00460 Flagella basal body rod protein AVCG78_00305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG78_00315 PF14602 Hexapeptide repeat of succinyl-transferase AVCG78_00315 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVCG78_00315 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_00320 PF01546 Peptidase family M20/M25/M40 AVCG78_00320 PF07687 Peptidase dimerisation domain AVCG78_00335 PF05161 MOFRL family AVCG78_00335 PF13660 Domain of unknown function (DUF4147) AVCG78_00340 PF01430 Hsp33 protein AVCG78_00345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVCG78_00345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVCG78_00350 PF00202 Aminotransferase class-III AVCG78_00360 PF00072 Response regulator receiver domain AVCG78_00360 PF00486 Transcriptional regulatory protein, C terminal AVCG78_00365 PF01895 PhoU domain AVCG78_00370 PF00005 ABC transporter AVCG78_00375 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_00380 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_00390 PF00989 PAS fold AVCG78_00390 PF16736 Single Cache-like AVCG78_00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_00390 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_00395 PF03976 Polyphosphate kinase 2 (PPK2) AVCG78_00415 PF00005 ABC transporter AVCG78_00415 PF00571 CBS domain AVCG78_00420 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_00435 PF07702 UTRA domain AVCG78_00435 PF00392 Bacterial regulatory proteins, gntR family AVCG78_00440 PF00221 Aromatic amino acid lyase AVCG78_00450 PF00202 Aminotransferase class-III AVCG78_00455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVCG78_00455 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AVCG78_00465 PF03480 Bacterial extracellular solute-binding protein, family 7 AVCG78_00470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_00485 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVCG78_00485 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVCG78_00495 PF05544 Proline racemase AVCG78_00500 PF13545 Crp-like helix-turn-helix domain AVCG78_00500 PF00027 Cyclic nucleotide-binding domain AVCG78_00505 PF00072 Response regulator receiver domain AVCG78_00505 PF00486 Transcriptional regulatory protein, C terminal AVCG78_00515 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_00515 PF01627 Hpt domain AVCG78_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_00515 PF00072 Response regulator receiver domain AVCG78_00515 PF00672 HAMP domain AVCG78_00515 PF17149 Periplasmic sensor domain found in signal transduction proteins AVCG78_00520 PF00072 Response regulator receiver domain AVCG78_00525 PF01979 Amidohydrolase family AVCG78_00530 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_00535 PF00156 Phosphoribosyl transferase domain AVCG78_00540 PF00294 pfkB family carbohydrate kinase AVCG78_00550 PF00342 Phosphoglucose isomerase AVCG78_00555 PF00501 AMP-binding enzyme AVCG78_00555 PF13193 AMP-binding enzyme C-terminal domain AVCG78_00565 PF00128 Alpha amylase, catalytic domain AVCG78_00565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG78_00580 PF01416 tRNA pseudouridine synthase AVCG78_00585 PF00551 Formyl transferase AVCG78_00585 PF02911 Formyl transferase, C-terminal domain AVCG78_00590 PF01327 Polypeptide deformylase AVCG78_00595 PF04379 ApaG domain AVCG78_00600 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG78_00605 PF00692 dUTPase AVCG78_00630 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_00645 PF00196 Bacterial regulatory proteins, luxR family AVCG78_00645 PF00072 Response regulator receiver domain AVCG78_00655 PF01180 Dihydroorotate dehydrogenase AVCG78_00695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVCG78_00695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVCG78_00695 PF00378 Enoyl-CoA hydratase/isomerase AVCG78_00700 PF00108 Thiolase, N-terminal domain AVCG78_00700 PF02803 Thiolase, C-terminal domain AVCG78_00705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_00705 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVCG78_00705 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_00705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_00715 PF01925 Sulfite exporter TauE/SafE AVCG78_00725 PF00245 Alkaline phosphatase AVCG78_00735 PF00005 ABC transporter AVCG78_00750 PF00563 EAL domain AVCG78_00750 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_00750 PF01590 GAF domain AVCG78_00750 PF00360 Phytochrome region AVCG78_00755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AVCG78_00755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVCG78_00760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_00765 PF08494 DEAD/H associated AVCG78_00765 PF00270 DEAD/DEAH box helicase AVCG78_00765 PF00271 Helicase conserved C-terminal domain AVCG78_00775 PF00069 Protein kinase domain AVCG78_00775 PF03793 PASTA domain AVCG78_00785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVCG78_00790 PF00672 HAMP domain AVCG78_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_00790 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_00790 PF01627 Hpt domain AVCG78_00790 PF00072 Response regulator receiver domain AVCG78_00795 PF01741 Large-conductance mechanosensitive channel, MscL AVCG78_00800 PF00155 Aminotransferase class I and II AVCG78_00805 PF00483 Nucleotidyl transferase AVCG78_00810 PF16363 GDP-mannose 4,6 dehydratase AVCG78_00815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVCG78_00820 PF08484 C-methyltransferase C-terminal domain AVCG78_00820 PF08421 Putative zinc binding domain AVCG78_00825 PF00535 Glycosyl transferase family 2 AVCG78_00850 PF03884 DNA gyrase inhibitor YacG AVCG78_00855 PF02545 Maf-like protein AVCG78_00860 PF01176 Translation initiation factor 1A / IF-1 AVCG78_00870 PF06793 Uncharacterised protein family (UPF0262) AVCG78_00875 PF00815 Histidinol dehydrogenase AVCG78_00885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVCG78_00910 PF00005 ABC transporter AVCG78_00920 PF00535 Glycosyl transferase family 2 AVCG78_00930 PF00005 ABC transporter AVCG78_00930 PF12848 ABC transporter AVCG78_00940 PF07715 TonB-dependent Receptor Plug Domain AVCG78_00940 PF00593 TonB dependent receptor AVCG78_00955 PF01312 FlhB HrpN YscU SpaS Family AVCG78_00960 PF01706 FliG C-terminal domain AVCG78_00960 PF14841 FliG middle domain AVCG78_00960 PF14842 FliG N-terminal domain AVCG78_00965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVCG78_00970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVCG78_00975 PF01618 MotA/TolQ/ExbB proton channel family AVCG78_00980 PF00460 Flagella basal body rod protein AVCG78_00980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG78_00985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG78_00985 PF18269 T3SS EscN ATPase C-terminal domain AVCG78_00995 PF00460 Flagella basal body rod protein AVCG78_01000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG78_01005 PF02049 Flagellar hook-basal body complex protein FliE AVCG78_01010 PF00460 Flagella basal body rod protein AVCG78_01010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG78_01015 PF13144 Chaperone for flagella basal body P-ring formation AVCG78_01020 PF02119 Flagellar P-ring protein AVCG78_01030 PF02107 Flagellar L-ring protein AVCG78_01040 PF00813 FliP family AVCG78_01045 PF00669 Bacterial flagellin N-terminal helical region AVCG78_01045 PF00700 Bacterial flagellin C-terminal helical region AVCG78_01050 PF00700 Bacterial flagellin C-terminal helical region AVCG78_01050 PF00669 Bacterial flagellin N-terminal helical region AVCG78_01060 PF00700 Bacterial flagellin C-terminal helical region AVCG78_01060 PF00669 Bacterial flagellin N-terminal helical region AVCG78_01065 PF00700 Bacterial flagellin C-terminal helical region AVCG78_01065 PF00669 Bacterial flagellin N-terminal helical region AVCG78_01070 PF00669 Bacterial flagellin N-terminal helical region AVCG78_01070 PF00700 Bacterial flagellin C-terminal helical region AVCG78_01080 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVCG78_01080 PF00691 OmpA family AVCG78_01100 PF00486 Transcriptional regulatory protein, C terminal AVCG78_01105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG78_01105 PF00460 Flagella basal body rod protein AVCG78_01105 PF07559 Flagellar basal body protein FlaE AVCG78_01110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG78_01110 PF00460 Flagella basal body rod protein AVCG78_01125 PF07378 Flagellar protein FlbT AVCG78_01130 PF03963 Flagellar hook capping protein - N-terminal region AVCG78_01135 PF01313 Bacterial export proteins, family 3 AVCG78_01140 PF00771 FHIPEP family AVCG78_01175 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVCG78_01175 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVCG78_01180 PF00356 Bacterial regulatory proteins, lacI family AVCG78_01185 PF01547 Bacterial extracellular solute-binding protein AVCG78_01190 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_01195 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_01200 PF00128 Alpha amylase, catalytic domain AVCG78_01205 PF17912 MalK OB fold domain AVCG78_01205 PF03459 TOBE domain AVCG78_01205 PF00005 ABC transporter AVCG78_01225 PF03390 2-hydroxycarboxylate transporter family AVCG78_01230 PF00672 HAMP domain AVCG78_01230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01230 PF02203 Tar ligand binding domain homologue AVCG78_01235 PF00920 Dehydratase family AVCG78_01240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AVCG78_01245 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVCG78_01245 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVCG78_01250 PF01266 FAD dependent oxidoreductase AVCG78_01255 PF00120 Glutamine synthetase, catalytic domain AVCG78_01275 PF00672 HAMP domain AVCG78_01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01280 PF03466 LysR substrate binding domain AVCG78_01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_01295 PF07690 Major Facilitator Superfamily AVCG78_01305 PF00463 Isocitrate lyase family AVCG78_01310 PF09856 Predicted transcriptional regulator (DUF2083) AVCG78_01310 PF01381 Helix-turn-helix AVCG78_01310 PF06114 IrrE N-terminal-like domain AVCG78_01315 PF13416 Bacterial extracellular solute-binding protein AVCG78_01320 PF00005 ABC transporter AVCG78_01320 PF08402 TOBE domain AVCG78_01325 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_01330 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_01340 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_01340 PF00989 PAS fold AVCG78_01340 PF13188 PAS domain AVCG78_01340 PF13426 PAS domain AVCG78_01385 PF00171 Aldehyde dehydrogenase family AVCG78_01390 PF02082 Transcriptional regulator AVCG78_01395 PF01202 Shikimate kinase AVCG78_01400 PF02611 CDP-diacylglycerol pyrophosphatase AVCG78_01405 PF01266 FAD dependent oxidoreductase AVCG78_01410 PF07470 Glycosyl Hydrolase Family 88 AVCG78_01420 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_01420 PF00672 HAMP domain AVCG78_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_01425 PF00486 Transcriptional regulatory protein, C terminal AVCG78_01425 PF00072 Response regulator receiver domain AVCG78_01430 PF06039 Malate:quinone oxidoreductase (Mqo) AVCG78_01435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_01460 PF02541 Ppx/GppA phosphatase family AVCG78_01465 PF01728 FtsJ-like methyltransferase AVCG78_01475 PF13188 PAS domain AVCG78_01475 PF00563 EAL domain AVCG78_01475 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_01475 PF03707 Bacterial signalling protein N terminal repeat AVCG78_01480 PF00072 Response regulator receiver domain AVCG78_01480 PF00989 PAS fold AVCG78_01480 PF01627 Hpt domain AVCG78_01480 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVCG78_01480 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_01485 PF08676 MutL C terminal dimerisation domain AVCG78_01485 PF01119 DNA mismatch repair protein, C-terminal domain AVCG78_01495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVCG78_01505 PF00534 Glycosyl transferases group 1 AVCG78_01505 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVCG78_01515 PF00459 Inositol monophosphatase family AVCG78_01520 PF01523 Putative modulator of DNA gyrase AVCG78_01525 PF00999 Sodium/hydrogen exchanger family AVCG78_01525 PF02254 TrkA-N domain AVCG78_01530 PF01734 Patatin-like phospholipase AVCG78_01540 PF01479 S4 domain AVCG78_01540 PF00849 RNA pseudouridylate synthase AVCG78_01545 PF14437 MafB19-like deaminase AVCG78_01550 PF00753 Metallo-beta-lactamase superfamily AVCG78_01555 PF07690 Major Facilitator Superfamily AVCG78_01565 PF08450 SMP-30/Gluconolactonase/LRE-like region AVCG78_01570 PF03472 Autoinducer binding domain AVCG78_01570 PF00196 Bacterial regulatory proteins, luxR family AVCG78_01580 PF10609 NUBPL iron-transfer P-loop NTPase AVCG78_01585 PF01544 CorA-like Mg2+ transporter protein AVCG78_01590 PF02705 K+ potassium transporter AVCG78_01595 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter AVCG78_01600 PF00119 ATP synthase A chain AVCG78_01605 PF00137 ATP synthase subunit C AVCG78_01610 PF00430 ATP synthase B/B' CF(0) AVCG78_01615 PF00430 ATP synthase B/B' CF(0) AVCG78_01620 PF01351 Ribonuclease HII AVCG78_01625 PF04055 Radical SAM superfamily AVCG78_01635 PF00994 Probable molybdopterin binding domain AVCG78_01640 PF00288 GHMP kinases N terminal domain AVCG78_01640 PF08544 GHMP kinases C terminal AVCG78_01650 PF00348 Polyprenyl synthetase AVCG78_01665 PF01343 Peptidase family S49 AVCG78_01665 PF06965 Na+/H+ antiporter 1 AVCG78_01675 PF13426 PAS domain AVCG78_01675 PF08447 PAS fold AVCG78_01675 PF07536 HWE histidine kinase AVCG78_01680 PF02091 Glycyl-tRNA synthetase alpha subunit AVCG78_01690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVCG78_01695 PF05746 DALR anticodon binding domain AVCG78_01695 PF02092 Glycyl-tRNA synthetase beta subunit AVCG78_01700 PF04463 Protein of unknown function (DUF523) AVCG78_01705 PF17200 Single Cache domain 2 AVCG78_01705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01705 PF17200 Single Cache domain 2 AVCG78_01705 PF00672 HAMP domain AVCG78_01705 PF00672 HAMP domain AVCG78_01705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01715 PF02844 Phosphoribosylglycinamide synthetase, N domain AVCG78_01715 PF02843 Phosphoribosylglycinamide synthetase, C domain AVCG78_01715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVCG78_01725 PF17674 HHH domain AVCG78_01725 PF00575 S1 RNA binding domain AVCG78_01725 PF09371 Tex-like protein N-terminal domain AVCG78_01725 PF16921 Tex protein YqgF-like domain AVCG78_01735 PF01040 UbiA prenyltransferase family AVCG78_01740 PF02583 Metal-sensitive transcriptional repressor AVCG78_01765 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_01770 PF00005 ABC transporter AVCG78_01770 PF03459 TOBE domain AVCG78_01785 PF02913 FAD linked oxidases, C-terminal domain AVCG78_01785 PF01565 FAD binding domain AVCG78_01790 PF03481 Putative GTP-binding controlling metal-binding AVCG78_01790 PF01300 Telomere recombination AVCG78_01800 PF02203 Tar ligand binding domain homologue AVCG78_01800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01800 PF00672 HAMP domain AVCG78_01805 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVCG78_01805 PF00355 Rieske [2Fe-2S] domain AVCG78_01810 PF00175 Oxidoreductase NAD-binding domain AVCG78_01810 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_01810 PF00970 Oxidoreductase FAD-binding domain AVCG78_01820 PF07886 BA14K-like protein AVCG78_01830 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_01830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_01830 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVCG78_01830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_01835 PF00378 Enoyl-CoA hydratase/isomerase AVCG78_01840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01840 PF00672 HAMP domain AVCG78_01840 PF02743 Cache domain AVCG78_01850 PF05958 tRNA (Uracil-5-)-methyltransferase AVCG78_01855 PF01479 S4 domain AVCG78_01855 PF01728 FtsJ-like methyltransferase AVCG78_01860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01860 PF00672 HAMP domain AVCG78_01865 PF02203 Tar ligand binding domain homologue AVCG78_01865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_01865 PF00672 HAMP domain AVCG78_01870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVCG78_01870 PF02779 Transketolase, pyrimidine binding domain AVCG78_01870 PF02780 Transketolase, C-terminal domain AVCG78_01875 PF02609 Exonuclease VII small subunit AVCG78_01880 PF00850 Histone deacetylase domain AVCG78_01890 PF02632 BioY family AVCG78_01895 PF02361 Cobalt transport protein AVCG78_01900 PF00005 ABC transporter AVCG78_01905 PF00491 Arginase family AVCG78_01910 PF06224 Winged helix DNA-binding domain AVCG78_01930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVCG78_01930 PF00925 GTP cyclohydrolase II AVCG78_01935 PF01264 Chorismate synthase AVCG78_01940 PF13188 PAS domain AVCG78_01940 PF03707 Bacterial signalling protein N terminal repeat AVCG78_01940 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_01940 PF00563 EAL domain AVCG78_01950 PF00300 Histidine phosphatase superfamily (branch 1) AVCG78_01960 PF00226 DnaJ domain AVCG78_01960 PF01556 DnaJ C terminal domain AVCG78_01960 PF00684 DnaJ central domain AVCG78_01970 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVCG78_01970 PF01243 Pyridoxamine 5'-phosphate oxidase AVCG78_01980 PF07690 Major Facilitator Superfamily AVCG78_01985 PF00376 MerR family regulatory protein AVCG78_01985 PF09278 MerR, DNA binding AVCG78_01990 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG78_01990 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG78_02005 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_02015 PF01523 Putative modulator of DNA gyrase AVCG78_02025 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVCG78_02025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVCG78_02030 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVCG78_02035 PF01040 UbiA prenyltransferase family AVCG78_02045 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AVCG78_02050 PF00510 Cytochrome c oxidase subunit III AVCG78_02060 PF02104 SURF1 family AVCG78_02070 PF02401 LytB protein AVCG78_02075 PF00905 Penicillin binding protein transpeptidase domain AVCG78_02085 PF01810 LysE type translocator AVCG78_02090 PF00155 Aminotransferase class I and II AVCG78_02100 PF01636 Phosphotransferase enzyme family AVCG78_02105 PF00075 RNase H AVCG78_02115 PF01297 Zinc-uptake complex component A periplasmic AVCG78_02120 PF00950 ABC 3 transport family AVCG78_02125 PF00005 ABC transporter AVCG78_02130 PF00462 Glutaredoxin AVCG78_02130 PF08534 Redoxin AVCG78_02140 PF02622 Uncharacterized ACR, COG1678 AVCG78_02155 PF08447 PAS fold AVCG78_02155 PF08448 PAS fold AVCG78_02155 PF00563 EAL domain AVCG78_02155 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_02160 PF13302 Acetyltransferase (GNAT) domain AVCG78_02165 PF00675 Insulinase (Peptidase family M16) AVCG78_02165 PF05193 Peptidase M16 inactive domain AVCG78_02170 PF00291 Pyridoxal-phosphate dependent enzyme AVCG78_02170 PF14821 Threonine synthase N terminus AVCG78_02180 PF00781 Diacylglycerol kinase catalytic domain AVCG78_02185 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_02190 PF07729 FCD domain AVCG78_02190 PF00392 Bacterial regulatory proteins, gntR family AVCG78_02200 PF18755 Restriction Enzyme Adenine Methylase Associated AVCG78_02200 PF01555 DNA methylase AVCG78_02230 PF00730 HhH-GPD superfamily base excision DNA repair protein AVCG78_02230 PF14815 NUDIX domain AVCG78_02245 PF02463 RecF/RecN/SMC N terminal domain AVCG78_02255 PF07690 Major Facilitator Superfamily AVCG78_02270 PF00391 PEP-utilising enzyme, mobile domain AVCG78_02270 PF02896 PEP-utilising enzyme, TIM barrel domain AVCG78_02270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVCG78_02285 PF03466 LysR substrate binding domain AVCG78_02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_02295 PF01810 LysE type translocator AVCG78_02305 PF00529 HlyD membrane-fusion protein of T1SS AVCG78_02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG78_02310 PF00664 ABC transporter transmembrane region AVCG78_02310 PF00005 ABC transporter AVCG78_02325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_02325 PF02203 Tar ligand binding domain homologue AVCG78_02325 PF00672 HAMP domain AVCG78_02330 PF01507 Phosphoadenosine phosphosulfate reductase family AVCG78_02335 PF01507 Phosphoadenosine phosphosulfate reductase family AVCG78_02340 PF00009 Elongation factor Tu GTP binding domain AVCG78_02355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVCG78_02355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVCG78_02360 PF00356 Bacterial regulatory proteins, lacI family AVCG78_02360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVCG78_02370 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVCG78_02370 PF00753 Metallo-beta-lactamase superfamily AVCG78_02380 PF01965 DJ-1/PfpI family AVCG78_02400 PF00654 Voltage gated chloride channel AVCG78_02405 PF00700 Bacterial flagellin C-terminal helical region AVCG78_02405 PF00669 Bacterial flagellin N-terminal helical region AVCG78_02410 PF00654 Voltage gated chloride channel AVCG78_02430 PF00732 GMC oxidoreductase AVCG78_02430 PF05199 GMC oxidoreductase AVCG78_02435 PF00171 Aldehyde dehydrogenase family AVCG78_02440 PF00043 Glutathione S-transferase, C-terminal domain AVCG78_02440 PF13417 Glutathione S-transferase, N-terminal domain AVCG78_02445 PF12411 Choline sulfatase enzyme C terminal AVCG78_02445 PF00884 Sulfatase AVCG78_02450 PF13977 BetI-type transcriptional repressor, C-terminal AVCG78_02450 PF00440 Bacterial regulatory proteins, tetR family AVCG78_02455 PF00563 EAL domain AVCG78_02455 PF12792 CSS motif domain associated with EAL AVCG78_02465 PF00107 Zinc-binding dehydrogenase AVCG78_02465 PF14765 Polyketide synthase dehydratase AVCG78_02465 PF00550 Phosphopantetheine attachment site AVCG78_02465 PF08659 KR domain AVCG78_02465 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_02465 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_02465 PF00698 Acyl transferase domain AVCG78_02465 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_02465 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_02470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_02470 PF00672 HAMP domain AVCG78_02475 PF18254 HMW1 domain 2 AVCG78_02475 PF18071 HMW1C N-terminal AVCG78_02495 PF00455 DeoR C terminal sensor domain AVCG78_02495 PF08220 DeoR-like helix-turn-helix domain AVCG78_02510 PF08019 Phosphoethanolamine transferase EptA/EptB AVCG78_02510 PF00884 Sulfatase AVCG78_02540 PF07690 Major Facilitator Superfamily AVCG78_02555 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVCG78_02560 PF01810 LysE type translocator AVCG78_02565 PF00881 Nitroreductase family AVCG78_02590 PF01476 LysM domain AVCG78_02590 PF17969 L,D-transpeptidase C-terminal domain AVCG78_02590 PF03734 L,D-transpeptidase catalytic domain AVCG78_02595 PF03734 L,D-transpeptidase catalytic domain AVCG78_02595 PF17969 L,D-transpeptidase C-terminal domain AVCG78_02600 PF01047 MarR family AVCG78_02605 PF02566 OsmC-like protein AVCG78_02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_02615 PF12282 Signal transduction histidine kinase AVCG78_02615 PF07568 Histidine kinase AVCG78_02620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_02620 PF13426 PAS domain AVCG78_02620 PF00072 Response regulator receiver domain AVCG78_02630 PF00156 Phosphoribosyl transferase domain AVCG78_02640 PF02203 Tar ligand binding domain homologue AVCG78_02640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_02640 PF00672 HAMP domain AVCG78_02645 PF00672 HAMP domain AVCG78_02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_02645 PF02203 Tar ligand binding domain homologue AVCG78_02655 PF05872 Bacterial protein of unknown function (DUF853) AVCG78_02660 PF02463 RecF/RecN/SMC N terminal domain AVCG78_02670 PF00672 HAMP domain AVCG78_02670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_02675 PF02673 Bacitracin resistance protein BacA AVCG78_02680 PF00005 ABC transporter AVCG78_02685 PF02653 Branched-chain amino acid transport system / permease component AVCG78_02690 PF13407 Periplasmic binding protein domain AVCG78_02695 PF01047 MarR family AVCG78_02695 PF00480 ROK family AVCG78_02715 PF00005 ABC transporter AVCG78_02720 PF01032 FecCD transport family AVCG78_02735 PF01209 ubiE/COQ5 methyltransferase family AVCG78_02760 PF00034 Cytochrome c AVCG78_02765 PF01322 Cytochrome C' AVCG78_02780 PF13302 Acetyltransferase (GNAT) domain AVCG78_02785 PF02525 Flavodoxin-like fold AVCG78_02790 PF01638 HxlR-like helix-turn-helix AVCG78_02800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVCG78_02800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVCG78_02805 PF03692 Putative zinc- or iron-chelating domain AVCG78_02810 PF13426 PAS domain AVCG78_02810 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_02810 PF05231 MASE1 AVCG78_02810 PF08447 PAS fold AVCG78_02810 PF08448 PAS fold AVCG78_02810 PF00563 EAL domain AVCG78_02815 PF01063 Amino-transferase class IV AVCG78_02820 PF07732 Multicopper oxidase AVCG78_02820 PF07731 Multicopper oxidase AVCG78_02830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AVCG78_02830 PF00326 Prolyl oligopeptidase family AVCG78_02855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG78_02860 PF00582 Universal stress protein family AVCG78_02870 PF01124 MAPEG family AVCG78_02875 PF03006 Haemolysin-III related AVCG78_02880 PF00027 Cyclic nucleotide-binding domain AVCG78_02880 PF00325 Bacterial regulatory proteins, crp family AVCG78_02900 PF05443 ROS/MUCR transcriptional regulator protein AVCG78_02905 PF03334 Na+/H+ antiporter subunit AVCG78_02910 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVCG78_02915 PF01899 Na+/H+ ion antiporter subunit AVCG78_02920 PF00361 Proton-conducting membrane transporter AVCG78_02925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVCG78_02930 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVCG78_02935 PF13244 Domain of unknown function (DUF4040) AVCG78_02935 PF00361 Proton-conducting membrane transporter AVCG78_02935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG78_02940 PF01641 SelR domain AVCG78_02965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG78_02970 PF12704 MacB-like periplasmic core domain AVCG78_02970 PF02687 FtsX-like permease family AVCG78_02970 PF00005 ABC transporter AVCG78_02990 PF02657 Fe-S metabolism associated domain AVCG78_03000 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_03015 PF00873 AcrB/AcrD/AcrF family AVCG78_03085 PF00912 Transglycosylase AVCG78_03085 PF00905 Penicillin binding protein transpeptidase domain AVCG78_03090 PF03692 Putative zinc- or iron-chelating domain AVCG78_03105 PF00376 MerR family regulatory protein AVCG78_03105 PF09278 MerR, DNA binding AVCG78_03130 PF04860 Phage portal protein AVCG78_03225 PF00072 Response regulator receiver domain AVCG78_03225 PF00486 Transcriptional regulatory protein, C terminal AVCG78_03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_03235 PF16998 17 kDa outer membrane surface antigen AVCG78_03235 PF05433 Glycine zipper 2TM domain AVCG78_03245 PF03100 CcmE AVCG78_03250 PF01578 Cytochrome C assembly protein AVCG78_03250 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AVCG78_03255 PF03918 Cytochrome C biogenesis protein AVCG78_03265 PF13180 PDZ domain AVCG78_03270 PF00072 Response regulator receiver domain AVCG78_03270 PF00486 Transcriptional regulatory protein, C terminal AVCG78_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_03275 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_03275 PF00672 HAMP domain AVCG78_03280 PF03710 Glutamate-ammonia ligase adenylyltransferase AVCG78_03280 PF08335 GlnD PII-uridylyltransferase AVCG78_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_03285 PF00989 PAS fold AVCG78_03285 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_03290 PF01433 Peptidase family M1 domain AVCG78_03290 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVCG78_03290 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVCG78_03295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_03295 PF17202 Single cache domain 3 AVCG78_03295 PF00672 HAMP domain AVCG78_03330 PF00012 Hsp70 protein AVCG78_03340 PF00873 AcrB/AcrD/AcrF family AVCG78_03345 PF13533 Biotin-lipoyl like AVCG78_03360 PF01063 Amino-transferase class IV AVCG78_03380 PF03448 MgtE intracellular N domain AVCG78_03380 PF01769 Divalent cation transporter AVCG78_03380 PF00571 CBS domain AVCG78_03385 PF07690 Major Facilitator Superfamily AVCG78_03390 PF00781 Diacylglycerol kinase catalytic domain AVCG78_03395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_03395 PF00005 ABC transporter AVCG78_03400 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_03400 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_03405 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_03410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_03415 PF00120 Glutamine synthetase, catalytic domain AVCG78_03420 PF00202 Aminotransferase class-III AVCG78_03430 PF03551 Transcriptional regulator PadR-like family AVCG78_03435 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVCG78_03440 PF00535 Glycosyl transferase family 2 AVCG78_03450 PF01048 Phosphorylase superfamily AVCG78_03450 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AVCG78_03460 PF00043 Glutathione S-transferase, C-terminal domain AVCG78_03460 PF02798 Glutathione S-transferase, N-terminal domain AVCG78_03475 PF00155 Aminotransferase class I and II AVCG78_03490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_03490 PF14759 Reductase C-terminal AVCG78_03495 PF02530 Porin subfamily AVCG78_03500 PF02530 Porin subfamily AVCG78_03515 PF01464 Transglycosylase SLT domain AVCG78_03515 PF14718 Soluble lytic murein transglycosylase L domain AVCG78_03520 PF00701 Dihydrodipicolinate synthetase family AVCG78_03525 PF01668 SmpB protein AVCG78_03535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVCG78_03535 PF12833 Helix-turn-helix domain AVCG78_03535 PF02805 Metal binding domain of Ada AVCG78_03535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVCG78_03540 PF02203 Tar ligand binding domain homologue AVCG78_03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_03540 PF00672 HAMP domain AVCG78_03550 PF01192 RNA polymerase Rpb6 AVCG78_03555 PF13291 ACT domain AVCG78_03555 PF04607 Region found in RelA / SpoT proteins AVCG78_03555 PF02824 TGS domain AVCG78_03565 PF10502 Signal peptidase, peptidase S26 AVCG78_03570 PF00035 Double-stranded RNA binding motif AVCG78_03570 PF14622 Ribonuclease-III-like AVCG78_03575 PF07650 KH domain AVCG78_03575 PF01926 50S ribosome-binding GTPase AVCG78_03580 PF05145 Transition state regulatory protein AbrB AVCG78_03585 PF02565 Recombination protein O C terminal AVCG78_03585 PF11967 Recombination protein O N terminal AVCG78_03600 PF01966 HD domain AVCG78_03615 PF01966 HD domain AVCG78_03620 PF01571 Aminomethyltransferase folate-binding domain AVCG78_03640 PF00293 NUDIX domain AVCG78_03655 PF01066 CDP-alcohol phosphatidyltransferase AVCG78_03660 PF02666 Phosphatidylserine decarboxylase AVCG78_03665 PF00664 ABC transporter transmembrane region AVCG78_03665 PF00005 ABC transporter AVCG78_03670 PF01476 LysM domain AVCG78_03670 PF04972 BON domain AVCG78_03675 PF03641 Possible lysine decarboxylase AVCG78_03680 PF00892 EamA-like transporter family AVCG78_03685 PF00682 HMGL-like AVCG78_03685 PF08502 LeuA allosteric (dimerisation) domain AVCG78_03690 PF00561 alpha/beta hydrolase fold AVCG78_03710 PF01850 PIN domain AVCG78_03715 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AVCG78_03720 PF01406 tRNA synthetases class I (C) catalytic domain AVCG78_03725 PF00295 Glycosyl hydrolases family 28 AVCG78_03730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVCG78_03735 PF16363 GDP-mannose 4,6 dehydratase AVCG78_03740 PF04321 RmlD substrate binding domain AVCG78_03745 PF00483 Nucleotidyl transferase AVCG78_03750 PF00534 Glycosyl transferases group 1 AVCG78_03750 PF00535 Glycosyl transferase family 2 AVCG78_03760 PF00106 short chain dehydrogenase AVCG78_03765 PF13537 Glutamine amidotransferase domain AVCG78_03765 PF00156 Phosphoribosyl transferase domain AVCG78_03770 PF02674 Colicin V production protein AVCG78_03775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVCG78_03775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVCG78_03775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVCG78_03780 PF16363 GDP-mannose 4,6 dehydratase AVCG78_03785 PF16363 GDP-mannose 4,6 dehydratase AVCG78_03790 PF18073 Rubredoxin metal binding domain AVCG78_03790 PF06745 KaiC AVCG78_03795 PF01168 Alanine racemase, N-terminal domain AVCG78_03795 PF00842 Alanine racemase, C-terminal domain AVCG78_03800 PF02311 AraC-like ligand binding domain AVCG78_03800 PF12833 Helix-turn-helix domain AVCG78_03805 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_03810 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_03815 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_03820 PF00772 DnaB-like helicase N terminal domain AVCG78_03820 PF03796 DnaB-like helicase C terminal domain AVCG78_03825 PF03948 Ribosomal protein L9, C-terminal domain AVCG78_03825 PF01281 Ribosomal protein L9, N-terminal domain AVCG78_03835 PF01084 Ribosomal protein S18 AVCG78_03840 PF01250 Ribosomal protein S6 AVCG78_03850 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVCG78_03850 PF01447 Thermolysin metallopeptidase, catalytic domain AVCG78_03850 PF16485 Protealysin propeptide AVCG78_03860 PF00248 Aldo/keto reductase family AVCG78_03865 PF00698 Acyl transferase domain AVCG78_03875 PF00550 Phosphopantetheine attachment site AVCG78_03880 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_03880 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_03885 PF02618 YceG-like family AVCG78_03890 PF08340 Domain of unknown function (DUF1732) AVCG78_03890 PF03755 YicC-like family, N-terminal region AVCG78_03895 PF00625 Guanylate kinase AVCG78_03900 PF08242 Methyltransferase domain AVCG78_03905 PF00398 Ribosomal RNA adenine dimethylase AVCG78_03910 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVCG78_03925 PF03968 OstA-like protein AVCG78_03925 PF04453 LPS transport system D AVCG78_03940 PF01569 PAP2 superfamily AVCG78_03945 PF02789 Cytosol aminopeptidase family, N-terminal domain AVCG78_03945 PF00883 Cytosol aminopeptidase family, catalytic domain AVCG78_03955 PF02203 Tar ligand binding domain homologue AVCG78_03955 PF00672 HAMP domain AVCG78_03955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_03960 PF12848 ABC transporter AVCG78_03960 PF00005 ABC transporter AVCG78_03965 PF13417 Glutathione S-transferase, N-terminal domain AVCG78_03970 PF00334 Nucleoside diphosphate kinase AVCG78_03975 PF02391 MoaE protein AVCG78_03985 PF01066 CDP-alcohol phosphatidyltransferase AVCG78_03990 PF02151 UvrB/uvrC motif AVCG78_03990 PF08459 UvrC Helix-hairpin-helix N-terminal AVCG78_03990 PF12826 Helix-hairpin-helix motif AVCG78_03990 PF01541 GIY-YIG catalytic domain AVCG78_04000 PF13505 Outer membrane protein beta-barrel domain AVCG78_04005 PF00043 Glutathione S-transferase, C-terminal domain AVCG78_04005 PF13417 Glutathione S-transferase, N-terminal domain AVCG78_04010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVCG78_04015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG78_04015 PF00384 Molybdopterin oxidoreductase AVCG78_04015 PF01568 Molydopterin dinucleotide binding domain AVCG78_04020 PF00293 NUDIX domain AVCG78_04025 PF00753 Metallo-beta-lactamase superfamily AVCG78_04025 PF04273 Putative phosphatase (DUF442) AVCG78_04035 PF04143 Sulphur transport AVCG78_04045 PF01925 Sulfite exporter TauE/SafE AVCG78_04050 PF00551 Formyl transferase AVCG78_04055 PF00586 AIR synthase related protein, N-terminal domain AVCG78_04055 PF02769 AIR synthase related protein, C-terminal domain AVCG78_04060 PF01594 AI-2E family transporter AVCG78_04070 PF17941 Polyphosphate kinase C-terminal domain 1 AVCG78_04070 PF13089 Polyphosphate kinase N-terminal domain AVCG78_04070 PF13090 Polyphosphate kinase C-terminal domain 2 AVCG78_04070 PF02503 Polyphosphate kinase middle domain AVCG78_04075 PF02541 Ppx/GppA phosphatase family AVCG78_04080 PF02742 Iron dependent repressor, metal binding and dimerisation domain AVCG78_04080 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG78_04085 PF01566 Natural resistance-associated macrophage protein AVCG78_04105 PF01612 3'-5' exonuclease AVCG78_04105 PF00570 HRDC domain AVCG78_04120 PF02938 GAD domain AVCG78_04120 PF01336 OB-fold nucleic acid binding domain AVCG78_04120 PF00152 tRNA synthetases class II (D, K and N) AVCG78_04135 PF00521 DNA gyrase/topoisomerase IV, subunit A AVCG78_04135 PF03989 DNA gyrase C-terminal domain, beta-propeller AVCG78_04140 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_04140 PF03707 Bacterial signalling protein N terminal repeat AVCG78_04140 PF13188 PAS domain AVCG78_04140 PF00563 EAL domain AVCG78_04150 PF00563 EAL domain AVCG78_04150 PF01590 GAF domain AVCG78_04150 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_04150 PF00989 PAS fold AVCG78_04155 PF04377 Arginine-tRNA-protein transferase, C terminus AVCG78_04155 PF04376 Arginine-tRNA-protein transferase, N terminus AVCG78_04165 PF00490 Delta-aminolevulinic acid dehydratase AVCG78_04185 PF00464 Serine hydroxymethyltransferase AVCG78_04190 PF03477 ATP cone domain AVCG78_04195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVCG78_04195 PF01872 RibD C-terminal domain AVCG78_04200 PF00677 Lumazine binding domain AVCG78_04210 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVCG78_04215 PF01029 NusB family AVCG78_04220 PF07690 Major Facilitator Superfamily AVCG78_04225 PF03030 Inorganic H+ pyrophosphatase AVCG78_04245 PF02504 Fatty acid synthesis protein AVCG78_04250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVCG78_04250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVCG78_04255 PF00216 Bacterial DNA-binding protein AVCG78_04260 PF13411 MerR HTH family regulatory protein AVCG78_04310 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVCG78_04310 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVCG78_04310 PF01276 Orn/Lys/Arg decarboxylase, major domain AVCG78_04325 PF11799 impB/mucB/samB family C-terminal domain AVCG78_04325 PF00817 impB/mucB/samB family AVCG78_04335 PF00753 Metallo-beta-lactamase superfamily AVCG78_04370 PF02397 Bacterial sugar transferase AVCG78_04385 PF02706 Chain length determinant protein AVCG78_04400 PF02628 Cytochrome oxidase assembly protein AVCG78_04405 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVCG78_04410 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AVCG78_04415 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVCG78_04420 PF00491 Arginase family AVCG78_04435 PF03992 Antibiotic biosynthesis monooxygenase AVCG78_04440 PF00380 Ribosomal protein S9/S16 AVCG78_04445 PF00572 Ribosomal protein L13 AVCG78_04450 PF13380 CoA binding domain AVCG78_04460 PF13380 CoA binding domain AVCG78_04465 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG78_04470 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG78_04470 PF00149 Calcineurin-like phosphoesterase AVCG78_04480 PF00067 Cytochrome P450 AVCG78_04485 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_04485 PF17151 Periplasmic sensor domain AVCG78_04490 PF00574 Clp protease AVCG78_04495 PF07724 AAA domain (Cdc48 subfamily) AVCG78_04495 PF06689 ClpX C4-type zinc finger AVCG78_04495 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG78_04500 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVCG78_04500 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_04500 PF05362 Lon protease (S16) C-terminal proteolytic domain AVCG78_04505 PF00216 Bacterial DNA-binding protein AVCG78_04520 PF01047 MarR family AVCG78_04525 PF13193 AMP-binding enzyme C-terminal domain AVCG78_04525 PF00501 AMP-binding enzyme AVCG78_04530 PF00378 Enoyl-CoA hydratase/isomerase AVCG78_04550 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AVCG78_04555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AVCG78_04560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AVCG78_04565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AVCG78_04580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVCG78_04580 PF10531 SLBB domain AVCG78_04580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVCG78_04585 PF00318 Ribosomal protein S2 AVCG78_04590 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVCG78_04590 PF00384 Molybdopterin oxidoreductase AVCG78_04590 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AVCG78_04595 PF00146 NADH dehydrogenase AVCG78_04600 PF12838 4Fe-4S dicluster domain AVCG78_04605 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AVCG78_04610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVCG78_04615 PF00361 Proton-conducting membrane transporter AVCG78_04615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG78_04620 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AVCG78_04620 PF00361 Proton-conducting membrane transporter AVCG78_04625 PF00361 Proton-conducting membrane transporter AVCG78_04630 PF02237 Biotin protein ligase C terminal domain AVCG78_04630 PF03309 Type III pantothenate kinase AVCG78_04630 PF03099 Biotin/lipoate A/B protein ligase family AVCG78_04635 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVCG78_04635 PF12706 Beta-lactamase superfamily domain AVCG78_04635 PF17770 Ribonuclease J C-terminal domain AVCG78_04645 PF01042 Endoribonuclease L-PSP AVCG78_04660 PF03129 Anticodon binding domain AVCG78_04660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVCG78_04665 PF02687 FtsX-like permease family AVCG78_04665 PF12704 MacB-like periplasmic core domain AVCG78_04670 PF00005 ABC transporter AVCG78_04675 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVCG78_04675 PF14579 Helix-hairpin-helix motif AVCG78_04675 PF02811 PHP domain AVCG78_04675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVCG78_04685 PF00817 impB/mucB/samB family AVCG78_04685 PF11799 impB/mucB/samB family C-terminal domain AVCG78_04700 PF00072 Response regulator receiver domain AVCG78_04705 PF00072 Response regulator receiver domain AVCG78_04705 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_04710 PF00471 Ribosomal protein L33 AVCG78_04715 PF07690 Major Facilitator Superfamily AVCG78_04725 PF00773 RNB domain AVCG78_04725 PF08206 Ribonuclease B OB domain AVCG78_04725 PF08461 Ribonuclease R winged-helix domain AVCG78_04725 PF17876 Cold shock domain AVCG78_04725 PF00575 S1 RNA binding domain AVCG78_04730 PF01131 DNA topoisomerase AVCG78_04730 PF01396 Topoisomerase DNA binding C4 zinc finger AVCG78_04730 PF13368 Topoisomerase C-terminal repeat AVCG78_04730 PF01751 Toprim domain AVCG78_04740 PF17782 DprA winged helix domain AVCG78_04740 PF02481 DNA recombination-mediator protein A AVCG78_04745 PF02660 Glycerol-3-phosphate acyltransferase AVCG78_04750 PF01979 Amidohydrolase family AVCG78_04755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVCG78_04755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVCG78_04760 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_04760 PF18158 Adaptive response protein AidB N-terminal domain AVCG78_04760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_04765 PF00583 Acetyltransferase (GNAT) family AVCG78_04780 PF03652 Holliday junction resolvase AVCG78_04790 PF02686 Glu-tRNAGln amidotransferase C subunit AVCG78_04795 PF01425 Amidase AVCG78_04810 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AVCG78_04815 PF07578 Lipid A Biosynthesis N-terminal domain AVCG78_04815 PF02684 Lipid-A-disaccharide synthetase AVCG78_04820 PF00535 Glycosyl transferase family 2 AVCG78_04825 PF02637 GatB domain AVCG78_04825 PF02934 GatB/GatE catalytic domain AVCG78_04845 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) AVCG78_04850 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVCG78_04855 PF02785 Biotin carboxylase C-terminal domain AVCG78_04855 PF00289 Biotin carboxylase, N-terminal domain AVCG78_04855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_04860 PF00364 Biotin-requiring enzyme AVCG78_04865 PF01220 Dehydroquinase class II AVCG78_04870 PF13462 Thioredoxin AVCG78_04875 PF00155 Aminotransferase class I and II AVCG78_04885 PF12111 Polyribonucleotide phosphorylase C terminal AVCG78_04885 PF10150 Ribonuclease E/G family AVCG78_04885 PF00575 S1 RNA binding domain AVCG78_04890 PF01520 N-acetylmuramoyl-L-alanine amidase AVCG78_04890 PF11741 AMIN domain AVCG78_04895 PF17092 Penicillin-binding protein OB-like domain AVCG78_04895 PF00912 Transglycosylase AVCG78_04895 PF00905 Penicillin binding protein transpeptidase domain AVCG78_04905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVCG78_04915 PF01513 ATP-NAD kinase AVCG78_04935 PF00588 SpoU rRNA Methylase family AVCG78_04935 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVCG78_04955 PF00009 Elongation factor Tu GTP binding domain AVCG78_04955 PF03144 Elongation factor Tu domain 2 AVCG78_04955 PF03143 Elongation factor Tu C-terminal domain AVCG78_04980 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVCG78_04985 PF00467 KOW motif AVCG78_04985 PF02357 Transcription termination factor nusG AVCG78_04990 PF03946 Ribosomal protein L11, N-terminal domain AVCG78_04990 PF00298 Ribosomal protein L11, RNA binding domain AVCG78_04995 PF00687 Ribosomal protein L1p/L10e family AVCG78_05000 PF00466 Ribosomal protein L10 AVCG78_05005 PF00542 Ribosomal protein L7/L12 C-terminal domain AVCG78_05005 PF16320 Ribosomal protein L7/L12 dimerisation domain AVCG78_05010 PF04560 RNA polymerase Rpb2, domain 7 AVCG78_05010 PF00562 RNA polymerase Rpb2, domain 6 AVCG78_05010 PF04565 RNA polymerase Rpb2, domain 3 AVCG78_05010 PF10385 RNA polymerase beta subunit external 1 domain AVCG78_05010 PF04561 RNA polymerase Rpb2, domain 2 AVCG78_05010 PF04563 RNA polymerase beta subunit AVCG78_05015 PF04997 RNA polymerase Rpb1, domain 1 AVCG78_05015 PF00623 RNA polymerase Rpb1, domain 2 AVCG78_05015 PF04983 RNA polymerase Rpb1, domain 3 AVCG78_05015 PF05000 RNA polymerase Rpb1, domain 4 AVCG78_05015 PF04998 RNA polymerase Rpb1, domain 5 AVCG78_05030 PF00164 Ribosomal protein S12/S23 AVCG78_05035 PF00177 Ribosomal protein S7p/S5e AVCG78_05040 PF03144 Elongation factor Tu domain 2 AVCG78_05040 PF00009 Elongation factor Tu GTP binding domain AVCG78_05040 PF14492 Elongation Factor G, domain II AVCG78_05040 PF03764 Elongation factor G, domain IV AVCG78_05040 PF00679 Elongation factor G C-terminus AVCG78_05045 PF00009 Elongation factor Tu GTP binding domain AVCG78_05045 PF03144 Elongation factor Tu domain 2 AVCG78_05045 PF03143 Elongation factor Tu C-terminal domain AVCG78_05050 PF00338 Ribosomal protein S10p/S20e AVCG78_05055 PF00297 Ribosomal protein L3 AVCG78_05060 PF00573 Ribosomal protein L4/L1 family AVCG78_05065 PF00276 Ribosomal protein L23 AVCG78_05070 PF00181 Ribosomal Proteins L2, RNA binding domain AVCG78_05070 PF03947 Ribosomal Proteins L2, C-terminal domain AVCG78_05075 PF00203 Ribosomal protein S19 AVCG78_05080 PF00237 Ribosomal protein L22p/L17e AVCG78_05085 PF00189 Ribosomal protein S3, C-terminal domain AVCG78_05085 PF07650 KH domain AVCG78_05090 PF00252 Ribosomal protein L16p/L10e AVCG78_05095 PF00831 Ribosomal L29 protein AVCG78_05100 PF00366 Ribosomal protein S17 AVCG78_05105 PF00238 Ribosomal protein L14p/L23e AVCG78_05110 PF00467 KOW motif AVCG78_05110 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVCG78_05115 PF00281 Ribosomal protein L5 AVCG78_05115 PF00673 ribosomal L5P family C-terminus AVCG78_05120 PF00253 Ribosomal protein S14p/S29e AVCG78_05125 PF00410 Ribosomal protein S8 AVCG78_05130 PF00347 Ribosomal protein L6 AVCG78_05135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVCG78_05140 PF00333 Ribosomal protein S5, N-terminal domain AVCG78_05140 PF03719 Ribosomal protein S5, C-terminal domain AVCG78_05145 PF00327 Ribosomal protein L30p/L7e AVCG78_05150 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVCG78_05155 PF00344 SecY translocase AVCG78_05160 PF05191 Adenylate kinase, active site lid AVCG78_05165 PF00416 Ribosomal protein S13/S18 AVCG78_05170 PF00411 Ribosomal protein S11 AVCG78_05175 PF01000 RNA polymerase Rpb3/RpoA insert domain AVCG78_05175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVCG78_05175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVCG78_05180 PF01196 Ribosomal protein L17 AVCG78_05195 PF00581 Rhodanese-like domain AVCG78_05200 PF02272 DHHA1 domain AVCG78_05200 PF01411 tRNA synthetases class II (A) AVCG78_05200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVCG78_05205 PF00291 Pyridoxal-phosphate dependent enzyme AVCG78_05210 PF00875 DNA photolyase AVCG78_05210 PF03441 FAD binding domain of DNA photolyase AVCG78_05220 PF01476 LysM domain AVCG78_05220 PF08525 Opacity-associated protein A N-terminal motif AVCG78_05220 PF01551 Peptidase family M23 AVCG78_05225 PF04305 Protein of unknown function (DUF455) AVCG78_05230 PF00578 AhpC/TSA family AVCG78_05245 PF00765 Autoinducer synthase AVCG78_05255 PF01515 Phosphate acetyl/butaryl transferase AVCG78_05255 PF03949 Malic enzyme, NAD binding domain AVCG78_05255 PF00390 Malic enzyme, N-terminal domain AVCG78_05265 PF02405 Permease MlaE AVCG78_05270 PF00005 ABC transporter AVCG78_05280 PF03886 ABC-type transport auxiliary lipoprotein component AVCG78_05280 PF02470 MlaD protein AVCG78_05285 PF00155 Aminotransferase class I and II AVCG78_05285 PF00392 Bacterial regulatory proteins, gntR family AVCG78_05310 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AVCG78_05315 PF01259 SAICAR synthetase AVCG78_05325 PF07519 Tannase and feruloyl esterase AVCG78_05330 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_05330 PF07694 5TMR of 5TMR-LYT AVCG78_05340 PF00180 Isocitrate/isopropylmalate dehydrogenase AVCG78_05345 PF00588 SpoU rRNA Methylase family AVCG78_05350 PF01177 Asp/Glu/Hydantoin racemase AVCG78_05360 PF00571 CBS domain AVCG78_05360 PF03471 Transporter associated domain AVCG78_05360 PF01595 Cyclin M transmembrane N-terminal domain AVCG78_05370 PF07859 alpha/beta hydrolase fold AVCG78_05370 PF13472 GDSL-like Lipase/Acylhydrolase family AVCG78_05375 PF07687 Peptidase dimerisation domain AVCG78_05375 PF01546 Peptidase family M20/M25/M40 AVCG78_05380 PF00484 Carbonic anhydrase AVCG78_05390 PF03741 Integral membrane protein TerC family AVCG78_05395 PF01479 S4 domain AVCG78_05395 PF00163 Ribosomal protein S4/S9 N-terminal domain AVCG78_05400 PF04960 Glutaminase AVCG78_05410 PF01171 PP-loop family AVCG78_05415 PF00459 Inositol monophosphatase family AVCG78_05420 PF00459 Inositol monophosphatase family AVCG78_05425 PF07690 Major Facilitator Superfamily AVCG78_05430 PF00462 Glutaredoxin AVCG78_05445 PF00586 AIR synthase related protein, N-terminal domain AVCG78_05445 PF02769 AIR synthase related protein, C-terminal domain AVCG78_05445 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVCG78_05450 PF00226 DnaJ domain AVCG78_05450 PF01556 DnaJ C terminal domain AVCG78_05465 PF03099 Biotin/lipoate A/B protein ligase family AVCG78_05530 PF18298 NusG additional domain AVCG78_05530 PF02357 Transcription termination factor nusG AVCG78_05530 PF00467 KOW motif AVCG78_05690 PF12804 MobA-like NTP transferase domain AVCG78_05690 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_05695 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_05715 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_05720 PF00535 Glycosyl transferase family 2 AVCG78_05720 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVCG78_05745 PF02654 Cobalamin-5-phosphate synthase AVCG78_05750 PF02277 Phosphoribosyltransferase AVCG78_05755 PF01219 Prokaryotic diacylglycerol kinase AVCG78_05780 PF01327 Polypeptide deformylase AVCG78_05785 PF13545 Crp-like helix-turn-helix domain AVCG78_05785 PF00027 Cyclic nucleotide-binding domain AVCG78_05795 PF04055 Radical SAM superfamily AVCG78_05800 PF00550 Phosphopantetheine attachment site AVCG78_05805 PF07977 FabA-like domain AVCG78_05810 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_05810 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_05815 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_05815 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_05820 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_05820 PF00107 Zinc-binding dehydrogenase AVCG78_05835 PF00795 Carbon-nitrogen hydrolase AVCG78_05835 PF02540 NAD synthase AVCG78_05840 PF07676 WD40-like Beta Propeller Repeat AVCG78_05845 PF00881 Nitroreductase family AVCG78_05855 PF00579 tRNA synthetases class I (W and Y) AVCG78_05860 PF03702 Anhydro-N-acetylmuramic acid kinase AVCG78_05880 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_05880 PF00989 PAS fold AVCG78_05890 PF03167 Uracil DNA glycosylase superfamily AVCG78_05895 PF01037 Lrp/AsnC ligand binding domain AVCG78_05895 PF13404 AsnC-type helix-turn-helix domain AVCG78_05900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG78_05900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVCG78_05905 PF00561 alpha/beta hydrolase fold AVCG78_05910 PF08241 Methyltransferase domain AVCG78_05915 PF06233 Usg-like family AVCG78_05920 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_05925 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_05930 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_05940 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AVCG78_05945 PF12804 MobA-like NTP transferase domain AVCG78_05955 PF04055 Radical SAM superfamily AVCG78_05955 PF06463 Molybdenum Cofactor Synthesis C AVCG78_05965 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_05965 PF17158 Membrane-associated sensor, integral membrane domain AVCG78_05970 PF05681 Fumarate hydratase (Fumerase) AVCG78_05970 PF05683 Fumarase C-terminus AVCG78_05980 PF10415 Fumarase C C-terminus AVCG78_05980 PF00206 Lyase AVCG78_05985 PF01471 Putative peptidoglycan binding domain AVCG78_05985 PF03734 L,D-transpeptidase catalytic domain AVCG78_05990 PF01471 Putative peptidoglycan binding domain AVCG78_05990 PF03734 L,D-transpeptidase catalytic domain AVCG78_05995 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_06000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVCG78_06010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG78_06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_06015 PF01474 Class-II DAHP synthetase family AVCG78_06030 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVCG78_06045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVCG78_06045 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVCG78_06055 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_06055 PF00563 EAL domain AVCG78_06055 PF00360 Phytochrome region AVCG78_06055 PF01590 GAF domain AVCG78_06060 PF00271 Helicase conserved C-terminal domain AVCG78_06060 PF12344 Ultra-violet resistance protein B AVCG78_06060 PF04851 Type III restriction enzyme, res subunit AVCG78_06060 PF02151 UvrB/uvrC motif AVCG78_06060 PF17757 UvrB interaction domain AVCG78_06070 PF01979 Amidohydrolase family AVCG78_06090 PF00793 DAHP synthetase I family AVCG78_06095 PF03952 Enolase, N-terminal domain AVCG78_06095 PF00113 Enolase, C-terminal TIM barrel domain AVCG78_06105 PF00676 Dehydrogenase E1 component AVCG78_06110 PF00364 Biotin-requiring enzyme AVCG78_06110 PF02779 Transketolase, pyrimidine binding domain AVCG78_06110 PF02780 Transketolase, C-terminal domain AVCG78_06115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVCG78_06115 PF00364 Biotin-requiring enzyme AVCG78_06115 PF02817 e3 binding domain AVCG78_06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_06130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG78_06140 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVCG78_06140 PF04055 Radical SAM superfamily AVCG78_06160 PF07690 Major Facilitator Superfamily AVCG78_06160 PF00083 Sugar (and other) transporter AVCG78_06165 PF03364 Polyketide cyclase / dehydrase and lipid transport AVCG78_06175 PF02464 Competence-damaged protein AVCG78_06175 PF18146 Damage-inducible protein CinA KH domain AVCG78_06175 PF00994 Probable molybdopterin binding domain AVCG78_06180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVCG78_06180 PF02542 YgbB family AVCG78_06185 PF01207 Dihydrouridine synthase (Dus) AVCG78_06190 PF00989 PAS fold AVCG78_06190 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_06195 PF00158 Sigma-54 interaction domain AVCG78_06195 PF00072 Response regulator receiver domain AVCG78_06195 PF02954 Bacterial regulatory protein, Fis family AVCG78_06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_06200 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_06200 PF00989 PAS fold AVCG78_06200 PF00672 HAMP domain AVCG78_06205 PF02954 Bacterial regulatory protein, Fis family AVCG78_06205 PF00072 Response regulator receiver domain AVCG78_06205 PF00158 Sigma-54 interaction domain AVCG78_06210 PF17209 Hfq protein AVCG78_06215 PF13167 GTP-binding GTPase N-terminal AVCG78_06215 PF16360 GTP-binding GTPase Middle Region AVCG78_06215 PF01926 50S ribosome-binding GTPase AVCG78_06225 PF03819 MazG nucleotide pyrophosphohydrolase domain AVCG78_06235 PF10414 Sirohaem synthase dimerisation region AVCG78_06235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_06255 PF00970 Oxidoreductase FAD-binding domain AVCG78_06255 PF00175 Oxidoreductase NAD-binding domain AVCG78_06265 PF05036 Sporulation related domain AVCG78_06265 PF03330 Lytic transglycolase AVCG78_06270 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG78_06270 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG78_06275 PF02223 Thymidylate kinase AVCG78_06280 PF09115 DNA polymerase III, delta subunit, C terminal AVCG78_06285 PF01925 Sulfite exporter TauE/SafE AVCG78_06290 PF09334 tRNA synthetases class I (M) AVCG78_06290 PF08264 Anticodon-binding domain of tRNA AVCG78_06295 PF01026 TatD related DNase AVCG78_06300 PF03099 Biotin/lipoate A/B protein ligase family AVCG78_06300 PF12706 Beta-lactamase superfamily domain AVCG78_06305 PF00654 Voltage gated chloride channel AVCG78_06315 PF02683 Cytochrome C biogenesis protein transmembrane region AVCG78_06320 PF01494 FAD binding domain AVCG78_06330 PF00005 ABC transporter AVCG78_06340 PF02653 Branched-chain amino acid transport system / permease component AVCG78_06345 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG78_06355 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_06355 PF14602 Hexapeptide repeat of succinyl-transferase AVCG78_06355 PF12804 MobA-like NTP transferase domain AVCG78_06360 PF01380 SIS domain AVCG78_06380 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_06385 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_06390 PF17912 MalK OB fold domain AVCG78_06390 PF00005 ABC transporter AVCG78_06400 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG78_06400 PF00480 ROK family AVCG78_06405 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG78_06405 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG78_06410 PF01297 Zinc-uptake complex component A periplasmic AVCG78_06415 PF00005 ABC transporter AVCG78_06420 PF00950 ABC 3 transport family AVCG78_06425 PF01475 Ferric uptake regulator family AVCG78_06430 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_06445 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG78_06445 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG78_06465 PF12951 Passenger-associated-transport-repeat AVCG78_06480 PF01734 Patatin-like phospholipase AVCG78_06485 PF01502 Phosphoribosyl-AMP cyclohydrolase AVCG78_06490 PF01227 GTP cyclohydrolase I AVCG78_06500 PF01809 Putative membrane protein insertion efficiency factor AVCG78_06505 PF02824 TGS domain AVCG78_06505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVCG78_06505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVCG78_06505 PF03129 Anticodon binding domain AVCG78_06520 PF02445 Quinolinate synthetase A protein AVCG78_06525 PF00890 FAD binding domain AVCG78_06525 PF02910 Fumarate reductase flavoprotein C-term AVCG78_06530 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVCG78_06530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVCG78_06565 PF00583 Acetyltransferase (GNAT) family AVCG78_06570 PF01751 Toprim domain AVCG78_06570 PF00204 DNA gyrase B AVCG78_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_06570 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG78_06580 PF00072 Response regulator receiver domain AVCG78_06580 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_06585 PF00121 Triosephosphate isomerase AVCG78_06590 PF03840 Preprotein translocase SecG subunit AVCG78_06595 PF00117 Glutamine amidotransferase class-I AVCG78_06595 PF06418 CTP synthase N-terminus AVCG78_06620 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_06630 PF00809 Pterin binding enzyme AVCG78_06640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVCG78_06660 PF02347 Glycine cleavage system P-protein AVCG78_06665 PF01597 Glycine cleavage H-protein AVCG78_06670 PF01571 Aminomethyltransferase folate-binding domain AVCG78_06670 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG78_06690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVCG78_06695 PF01479 S4 domain AVCG78_06695 PF00849 RNA pseudouridylate synthase AVCG78_06700 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_06715 PF00083 Sugar (and other) transporter AVCG78_06725 PF07559 Flagellar basal body protein FlaE AVCG78_06725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVCG78_06725 PF00460 Flagella basal body rod protein AVCG78_06730 PF04002 RadC-like JAB domain AVCG78_06735 PF00557 Metallopeptidase family M24 AVCG78_06740 PF03466 LysR substrate binding domain AVCG78_06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_06745 PF03601 Conserved hypothetical protein 698 AVCG78_06750 PF03749 Sugar fermentation stimulation protein RE domain AVCG78_06750 PF17746 SfsA N-terminal OB domain AVCG78_06755 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AVCG78_06765 PF00155 Aminotransferase class I and II AVCG78_06770 PF01842 ACT domain AVCG78_06770 PF00742 Homoserine dehydrogenase AVCG78_06770 PF03447 Homoserine dehydrogenase, NAD binding domain AVCG78_06775 PF02272 DHHA1 domain AVCG78_06775 PF01368 DHH family AVCG78_06775 PF17768 RecJ OB domain AVCG78_06800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG78_06805 PF00313 'Cold-shock' DNA-binding domain AVCG78_06860 PF02768 DNA polymerase III beta subunit, C-terminal domain AVCG78_06860 PF00712 DNA polymerase III beta subunit, N-terminal domain AVCG78_06860 PF02767 DNA polymerase III beta subunit, central domain AVCG78_06895 PF00436 Single-strand binding protein family AVCG78_07220 PF00270 DEAD/DEAH box helicase AVCG78_07220 PF00271 Helicase conserved C-terminal domain AVCG78_07220 PF17191 RecG wedge domain AVCG78_07230 PF02559 CarD-like/TRCF domain AVCG78_07230 PF00270 DEAD/DEAH box helicase AVCG78_07230 PF00271 Helicase conserved C-terminal domain AVCG78_07230 PF03461 TRCF domain AVCG78_07230 PF17757 UvrB interaction domain AVCG78_07235 PF01810 LysE type translocator AVCG78_07245 PF00892 EamA-like transporter family AVCG78_07255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_07275 PF03951 Glutamine synthetase, beta-Grasp domain AVCG78_07275 PF00120 Glutamine synthetase, catalytic domain AVCG78_07280 PF00543 Nitrogen regulatory protein P-II AVCG78_07285 PF01256 Carbohydrate kinase AVCG78_07285 PF03853 YjeF-related protein N-terminus AVCG78_07300 PF17755 UvrA DNA-binding domain AVCG78_07300 PF17760 UvrA interaction domain AVCG78_07305 PF00436 Single-strand binding protein family AVCG78_07315 PF01914 MarC family integral membrane protein AVCG78_07320 PF03989 DNA gyrase C-terminal domain, beta-propeller AVCG78_07320 PF00521 DNA gyrase/topoisomerase IV, subunit A AVCG78_07325 PF00403 Heavy-metal-associated domain AVCG78_07330 PF12801 4Fe-4S binding domain AVCG78_07330 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVCG78_07330 PF13746 4Fe-4S dicluster domain AVCG78_07335 PF05751 FixH AVCG78_07345 PF03597 Cytochrome oxidase maturation protein cbb3-type AVCG78_07350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVCG78_07350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG78_07355 PF12706 Beta-lactamase superfamily domain AVCG78_07365 PF01547 Bacterial extracellular solute-binding protein AVCG78_07370 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_07375 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_07380 PF17912 MalK OB fold domain AVCG78_07380 PF00005 ABC transporter AVCG78_07400 PF00248 Aldo/keto reductase family AVCG78_07405 PF04616 Glycosyl hydrolases family 43 AVCG78_07405 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AVCG78_07420 PF01794 Ferric reductase like transmembrane component AVCG78_07425 PF00174 Oxidoreductase molybdopterin binding domain AVCG78_07430 PF00920 Dehydratase family AVCG78_07445 PF01810 LysE type translocator AVCG78_07450 PF00206 Lyase AVCG78_07450 PF10397 Adenylosuccinate lyase C-terminus AVCG78_07460 PF00834 Ribulose-phosphate 3 epimerase family AVCG78_07465 PF00106 short chain dehydrogenase AVCG78_07475 PF01613 Flavin reductase like domain AVCG78_07485 PF00264 Common central domain of tyrosinase AVCG78_07500 PF00270 DEAD/DEAH box helicase AVCG78_07500 PF00271 Helicase conserved C-terminal domain AVCG78_07505 PF01810 LysE type translocator AVCG78_07510 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AVCG78_07515 PF00266 Aminotransferase class-V AVCG78_07520 PF01458 Uncharacterized protein family (UPF0051) AVCG78_07525 PF00005 ABC transporter AVCG78_07530 PF01458 Uncharacterized protein family (UPF0051) AVCG78_07535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG78_07540 PF00266 Aminotransferase class-V AVCG78_07545 PF01883 Iron-sulfur cluster assembly protein AVCG78_07550 PF01521 Iron-sulphur cluster biosynthesis AVCG78_07560 PF01467 Cytidylyltransferase-like AVCG78_07565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVCG78_07570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVCG78_07575 PF02547 Queuosine biosynthesis protein AVCG78_07580 PF01702 Queuine tRNA-ribosyltransferase AVCG78_07590 PF00149 Calcineurin-like phosphoesterase AVCG78_07600 PF02625 XdhC and CoxI family AVCG78_07600 PF13478 XdhC Rossmann domain AVCG78_07605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG78_07605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG78_07610 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVCG78_07610 PF00941 FAD binding domain in molybdopterin dehydrogenase AVCG78_07615 PF01799 [2Fe-2S] binding domain AVCG78_07615 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_07615 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG78_07620 PF00440 Bacterial regulatory proteins, tetR family AVCG78_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_07630 PF08448 PAS fold AVCG78_07630 PF13188 PAS domain AVCG78_07630 PF00072 Response regulator receiver domain AVCG78_07630 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_07640 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVCG78_07650 PF04317 YcjX-like family, DUF463 AVCG78_07655 PF05128 Domain of unknown function (DUF697) AVCG78_07665 PF00491 Arginase family AVCG78_07670 PF00155 Aminotransferase class I and II AVCG78_07675 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_07675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG78_07680 PF12706 Beta-lactamase superfamily domain AVCG78_07685 PF05698 Bacterial trigger factor protein (TF) C-terminus AVCG78_07685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVCG78_07685 PF05697 Bacterial trigger factor protein (TF) AVCG78_07715 PF12002 MgsA AAA+ ATPase C terminal AVCG78_07715 PF16193 AAA C-terminal domain AVCG78_07715 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_07720 PF13180 PDZ domain AVCG78_07720 PF00595 PDZ domain AVCG78_07735 PF17763 Glutaminase/Asparaginase C-terminal domain AVCG78_07735 PF00710 Asparaginase, N-terminal AVCG78_07745 PF02872 5'-nucleotidase, C-terminal domain AVCG78_07745 PF00149 Calcineurin-like phosphoesterase AVCG78_07755 PF00535 Glycosyl transferase family 2 AVCG78_07760 PF00291 Pyridoxal-phosphate dependent enzyme AVCG78_07760 PF00585 C-terminal regulatory domain of Threonine dehydratase AVCG78_07770 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_07775 PF00005 ABC transporter AVCG78_07780 PF09347 Domain of unknown function (DUF1989) AVCG78_07790 PF00364 Biotin-requiring enzyme AVCG78_07790 PF02785 Biotin carboxylase C-terminal domain AVCG78_07790 PF00289 Biotin carboxylase, N-terminal domain AVCG78_07790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_07790 PF18140 Propionyl-coenzyme A carboxylase BT domain AVCG78_07810 PF00107 Zinc-binding dehydrogenase AVCG78_07810 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_07815 PF13673 Acetyltransferase (GNAT) domain AVCG78_07820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AVCG78_07830 PF00756 Putative esterase AVCG78_07835 PF02684 Lipid-A-disaccharide synthetase AVCG78_07845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVCG78_07845 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_07850 PF07977 FabA-like domain AVCG78_07855 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_07855 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVCG78_07860 PF01103 Surface antigen AVCG78_07860 PF07244 Surface antigen variable number repeat AVCG78_07865 PF17820 PDZ domain AVCG78_07865 PF02163 Peptidase family M50 AVCG78_07875 PF01255 Putative undecaprenyl diphosphate synthase AVCG78_07880 PF01765 Ribosome recycling factor AVCG78_07885 PF00696 Amino acid kinase family AVCG78_07890 PF00889 Elongation factor TS AVCG78_07895 PF00318 Ribosomal protein S2 AVCG78_07920 PF01230 HIT domain AVCG78_07935 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_07935 PF07724 AAA domain (Cdc48 subfamily) AVCG78_07935 PF17871 AAA lid domain AVCG78_07935 PF02861 Clp amino terminal domain, pathogenicity island component AVCG78_07935 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG78_07940 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVCG78_07955 PF06426 Serine acetyltransferase, N-terminal AVCG78_07955 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_07965 PF00561 alpha/beta hydrolase fold AVCG78_07980 PF01494 FAD binding domain AVCG78_07985 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG78_07990 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_07995 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_08000 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_08005 PF00005 ABC transporter AVCG78_08010 PF01425 Amidase AVCG78_08015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVCG78_08015 PF01411 tRNA synthetases class II (A) AVCG78_08015 PF02272 DHHA1 domain AVCG78_08020 PF00154 recA bacterial DNA recombination protein AVCG78_08030 PF04227 Indigoidine synthase A like protein AVCG78_08035 PF01726 LexA DNA binding domain AVCG78_08035 PF00717 Peptidase S24-like AVCG78_08040 PF03772 Competence protein AVCG78_08040 PF00753 Metallo-beta-lactamase superfamily AVCG78_08045 PF00285 Citrate synthase, C-terminal domain AVCG78_08055 PF02885 Glycosyl transferase family, helical bundle domain AVCG78_08055 PF00591 Glycosyl transferase family, a/b domain AVCG78_08060 PF00218 Indole-3-glycerol phosphate synthase AVCG78_08065 PF01967 MoaC family AVCG78_08070 PF03453 MoeA N-terminal region (domain I and II) AVCG78_08070 PF00994 Probable molybdopterin binding domain AVCG78_08070 PF03454 MoeA C-terminal region (domain IV) AVCG78_08075 PF01569 PAP2 superfamily AVCG78_08080 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVCG78_08090 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_08095 PF00005 ABC transporter AVCG78_08095 PF00571 CBS domain AVCG78_08115 PF09992 Phosphodiester glycosidase AVCG78_08130 PF00551 Formyl transferase AVCG78_08135 PF00067 Cytochrome P450 AVCG78_08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_08140 PF03466 LysR substrate binding domain AVCG78_08155 PF01965 DJ-1/PfpI family AVCG78_08155 PF12833 Helix-turn-helix domain AVCG78_08175 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_08180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVCG78_08195 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AVCG78_08195 PF02867 Ribonucleotide reductase, barrel domain AVCG78_08205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_08205 PF00672 HAMP domain AVCG78_08215 PF00156 Phosphoribosyl transferase domain AVCG78_08225 PF02464 Competence-damaged protein AVCG78_08225 PF18146 Damage-inducible protein CinA KH domain AVCG78_08225 PF00994 Probable molybdopterin binding domain AVCG78_08230 PF00672 HAMP domain AVCG78_08230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_08240 PF01584 CheW-like domain AVCG78_08250 PF03315 Serine dehydratase beta chain AVCG78_08250 PF03313 Serine dehydratase alpha chain AVCG78_08270 PF09278 MerR, DNA binding AVCG78_08270 PF00376 MerR family regulatory protein AVCG78_08275 PF00571 CBS domain AVCG78_08275 PF01769 Divalent cation transporter AVCG78_08275 PF03448 MgtE intracellular N domain AVCG78_08280 PF03358 NADPH-dependent FMN reductase AVCG78_08285 PF03186 CobD/Cbib protein AVCG78_08290 PF00155 Aminotransferase class I and II AVCG78_08295 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVCG78_08295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVCG78_08300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_08305 PF01888 CbiD AVCG78_08310 PF02571 Precorrin-6x reductase CbiJ/CobK AVCG78_08315 PF03975 CheD chemotactic sensory transduction AVCG78_08325 PF01156 Inosine-uridine preferring nucleoside hydrolase AVCG78_08330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_08335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_08340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_08345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_08350 PF02570 Precorrin-8X methylmutase AVCG78_08355 PF01903 CbiX AVCG78_08360 PF01925 Sulfite exporter TauE/SafE AVCG78_08365 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AVCG78_08375 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AVCG78_08380 PF02514 CobN/Magnesium Chelatase AVCG78_08385 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG78_08385 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG78_08390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AVCG78_08410 PF01134 Glucose inhibited division protein A AVCG78_08430 PF07549 SecD/SecF GG Motif AVCG78_08430 PF02355 Protein export membrane protein AVCG78_08435 PF02699 Preprotein translocase subunit AVCG78_08445 PF01476 LysM domain AVCG78_08445 PF01551 Peptidase family M23 AVCG78_08455 PF01975 Survival protein SurE AVCG78_08460 PF02403 Seryl-tRNA synthetase N-terminal domain AVCG78_08460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVCG78_08465 PF00902 Sec-independent protein translocase protein (TatC) AVCG78_08470 PF02416 mttA/Hcf106 family AVCG78_08475 PF02416 mttA/Hcf106 family AVCG78_08480 PF04079 Segregation and condensation complex subunit ScpB AVCG78_08485 PF02616 Segregation and condensation protein ScpA AVCG78_08490 PF00933 Glycosyl hydrolase family 3 N terminal domain AVCG78_08500 PF03485 Arginyl tRNA synthetase N terminal domain AVCG78_08500 PF05746 DALR anticodon binding domain AVCG78_08500 PF00750 tRNA synthetases class I (R) AVCG78_08505 PF01966 HD domain AVCG78_08505 PF13286 Phosphohydrolase-associated domain AVCG78_08510 PF01521 Iron-sulphur cluster biosynthesis AVCG78_08520 PF08238 Sel1 repeat AVCG78_08530 PF08264 Anticodon-binding domain of tRNA AVCG78_08530 PF00133 tRNA synthetases class I (I, L, M and V) AVCG78_08530 PF10458 Valyl tRNA synthetase tRNA binding arm AVCG78_08540 PF02321 Outer membrane efflux protein AVCG78_08560 PF00459 Inositol monophosphatase family AVCG78_08565 PF03009 Glycerophosphoryl diester phosphodiesterase family AVCG78_08570 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_08570 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_08575 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_08580 PF00005 ABC transporter AVCG78_08580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_08585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_08585 PF00005 ABC transporter AVCG78_08590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_08595 PF00455 DeoR C terminal sensor domain AVCG78_08595 PF08220 DeoR-like helix-turn-helix domain AVCG78_08605 PF01965 DJ-1/PfpI family AVCG78_08750 PF03796 DnaB-like helicase C terminal domain AVCG78_08750 PF00772 DnaB-like helicase N terminal domain AVCG78_08750 PF14528 LAGLIDADG-like domain AVCG78_08830 PF01061 ABC-2 type transporter AVCG78_08835 PF00005 ABC transporter AVCG78_08840 PF00072 Response regulator receiver domain AVCG78_08845 PF01266 FAD dependent oxidoreductase AVCG78_08845 PF16350 FAD dependent oxidoreductase central domain AVCG78_08845 PF01571 Aminomethyltransferase folate-binding domain AVCG78_08845 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG78_08855 PF08241 Methyltransferase domain AVCG78_08860 PF12794 Mechanosensitive ion channel inner membrane domain 1 AVCG78_08860 PF00924 Mechanosensitive ion channel AVCG78_08860 PF12795 Mechanosensitive ion channel porin domain AVCG78_08880 PF01497 Periplasmic binding protein AVCG78_08885 PF01032 FecCD transport family AVCG78_08890 PF00005 ABC transporter AVCG78_08915 PF00271 Helicase conserved C-terminal domain AVCG78_08915 PF00270 DEAD/DEAH box helicase AVCG78_08915 PF08494 DEAD/H associated AVCG78_08930 PF01037 Lrp/AsnC ligand binding domain AVCG78_08940 PF00202 Aminotransferase class-III AVCG78_08950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG78_08950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG78_08960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVCG78_08960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVCG78_08965 PF00550 Phosphopantetheine attachment site AVCG78_08965 PF00698 Acyl transferase domain AVCG78_08965 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_08965 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_08965 PF00668 Condensation domain AVCG78_08965 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_08975 PF01266 FAD dependent oxidoreductase AVCG78_08975 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVCG78_08990 PF00459 Inositol monophosphatase family AVCG78_09005 PF07756 Protein of unknown function (DUF1612) AVCG78_09005 PF11972 HTH DNA binding domain AVCG78_09040 PF02567 Phenazine biosynthesis-like protein AVCG78_09050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_09050 PF08447 PAS fold AVCG78_09050 PF13426 PAS domain AVCG78_09060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVCG78_09060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVCG78_09105 PF03466 LysR substrate binding domain AVCG78_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_09110 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_09110 PF17866 AAA lid domain AVCG78_09130 PF17862 AAA+ lid domain AVCG78_09130 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_09130 PF01434 Peptidase family M41 AVCG78_09175 PF01625 Peptide methionine sulfoxide reductase AVCG78_09190 PF01037 Lrp/AsnC ligand binding domain AVCG78_09195 PF01177 Asp/Glu/Hydantoin racemase AVCG78_09200 PF00440 Bacterial regulatory proteins, tetR family AVCG78_09205 PF07690 Major Facilitator Superfamily AVCG78_09210 PF08447 PAS fold AVCG78_09210 PF13426 PAS domain AVCG78_09210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_09215 PF01638 HxlR-like helix-turn-helix AVCG78_09225 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVCG78_09235 PF13411 MerR HTH family regulatory protein AVCG78_09235 PF07739 TipAS antibiotic-recognition domain AVCG78_09240 PF13538 UvrD-like helicase C-terminal domain AVCG78_09240 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AVCG78_09240 PF14490 Helix-hairpin-helix containing domain AVCG78_09255 PF00248 Aldo/keto reductase family AVCG78_09265 PF10369 Small subunit of acetolactate synthase AVCG78_09270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVCG78_09270 PF00205 Thiamine pyrophosphate enzyme, central domain AVCG78_09270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVCG78_09300 PF13302 Acetyltransferase (GNAT) domain AVCG78_09305 PF13180 PDZ domain AVCG78_09310 PF01145 SPFH domain / Band 7 family AVCG78_09315 PF01145 SPFH domain / Band 7 family AVCG78_09320 PF00186 Dihydrofolate reductase AVCG78_09325 PF07681 DoxX AVCG78_09330 PF00303 Thymidylate synthase AVCG78_09365 PF01565 FAD binding domain AVCG78_09365 PF02913 FAD linked oxidases, C-terminal domain AVCG78_09370 PF00005 ABC transporter AVCG78_09375 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_09380 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_09385 PF12849 PBP superfamily domain AVCG78_09390 PF13361 UvrD-like helicase C-terminal domain AVCG78_09390 PF00580 UvrD/REP helicase N-terminal domain AVCG78_09405 PF01011 PQQ enzyme repeat AVCG78_09410 PF00857 Isochorismatase family AVCG78_09415 PF02569 Pantoate-beta-alanine ligase AVCG78_09420 PF02548 Ketopantoate hydroxymethyltransferase AVCG78_09430 PF00890 FAD binding domain AVCG78_09430 PF02910 Fumarate reductase flavoprotein C-term AVCG78_09455 PF00557 Metallopeptidase family M24 AVCG78_09455 PF01321 Creatinase/Prolidase N-terminal domain AVCG78_09470 PF02630 SCO1/SenC AVCG78_09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_09475 PF00672 HAMP domain AVCG78_09480 PF01584 CheW-like domain AVCG78_09495 PF00929 Exonuclease AVCG78_09495 PF02811 PHP domain AVCG78_09495 PF14579 Helix-hairpin-helix motif AVCG78_09495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVCG78_09495 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVCG78_09495 PF11490 DNA polymerase III polC-type N-terminus II AVCG78_09505 PF02203 Tar ligand binding domain homologue AVCG78_09505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_09505 PF00672 HAMP domain AVCG78_09510 PF00583 Acetyltransferase (GNAT) family AVCG78_09515 PF00271 Helicase conserved C-terminal domain AVCG78_09515 PF00270 DEAD/DEAH box helicase AVCG78_09525 PF01593 Flavin containing amine oxidoreductase AVCG78_09540 PF01653 NAD-dependent DNA ligase adenylation domain AVCG78_09540 PF00533 BRCA1 C Terminus (BRCT) domain AVCG78_09540 PF03120 NAD-dependent DNA ligase OB-fold domain AVCG78_09540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVCG78_09540 PF12826 Helix-hairpin-helix motif AVCG78_09550 PF13091 PLD-like domain AVCG78_09550 PF13396 Phospholipase_D-nuclease N-terminal AVCG78_09555 PF02463 RecF/RecN/SMC N terminal domain AVCG78_09560 PF13525 Outer membrane lipoprotein AVCG78_09565 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVCG78_09570 PF12327 FtsZ family, C-terminal domain AVCG78_09570 PF00091 Tubulin/FtsZ family, GTPase domain AVCG78_09575 PF02491 SHS2 domain inserted in FTSA AVCG78_09580 PF08478 POTRA domain, FtsQ-type AVCG78_09580 PF03799 Cell division protein FtsQ AVCG78_09585 PF01820 D-ala D-ala ligase N-terminus AVCG78_09585 PF07478 D-ala D-ala ligase C-terminus AVCG78_09590 PF07690 Major Facilitator Superfamily AVCG78_09590 PF00083 Sugar (and other) transporter AVCG78_09595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVCG78_09595 PF01565 FAD binding domain AVCG78_09600 PF01225 Mur ligase family, catalytic domain AVCG78_09600 PF02875 Mur ligase family, glutamate ligase domain AVCG78_09600 PF08245 Mur ligase middle domain AVCG78_09605 PF03033 Glycosyltransferase family 28 N-terminal domain AVCG78_09605 PF04101 Glycosyltransferase family 28 C-terminal domain AVCG78_09610 PF01098 Cell cycle protein AVCG78_09625 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVCG78_09625 PF00953 Glycosyl transferase family 4 AVCG78_09630 PF02875 Mur ligase family, glutamate ligase domain AVCG78_09630 PF08245 Mur ligase middle domain AVCG78_09630 PF01225 Mur ligase family, catalytic domain AVCG78_09635 PF08245 Mur ligase middle domain AVCG78_09635 PF01225 Mur ligase family, catalytic domain AVCG78_09635 PF02875 Mur ligase family, glutamate ligase domain AVCG78_09640 PF03717 Penicillin-binding Protein dimerisation domain AVCG78_09640 PF00905 Penicillin binding protein transpeptidase domain AVCG78_09650 PF01795 MraW methylase family AVCG78_09655 PF02381 MraZ protein, putative antitoxin-like AVCG78_09675 PF01510 N-acetylmuramoyl-L-alanine amidase AVCG78_09680 PF05099 Tellurite resistance protein TerB AVCG78_09680 PF00226 DnaJ domain AVCG78_09685 PF00365 Phosphofructokinase AVCG78_09715 PF01183 Glycosyl hydrolases family 25 AVCG78_09730 PF12833 Helix-turn-helix domain AVCG78_09730 PF01965 DJ-1/PfpI family AVCG78_09735 PF02219 Methylenetetrahydrofolate reductase AVCG78_09740 PF01209 ubiE/COQ5 methyltransferase family AVCG78_09745 PF00672 HAMP domain AVCG78_09745 PF02743 Cache domain AVCG78_09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_09750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_09750 PF00672 HAMP domain AVCG78_09755 PF12848 ABC transporter AVCG78_09755 PF00005 ABC transporter AVCG78_09760 PF00445 Ribonuclease T2 family AVCG78_09765 PF12146 Serine aminopeptidase, S33 AVCG78_09775 PF00205 Thiamine pyrophosphate enzyme, central domain AVCG78_09775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVCG78_09775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVCG78_09790 PF01042 Endoribonuclease L-PSP AVCG78_09805 PF01476 LysM domain AVCG78_09805 PF03734 L,D-transpeptidase catalytic domain AVCG78_09810 PF07015 VirC1 protein AVCG78_09815 PF00465 Iron-containing alcohol dehydrogenase AVCG78_09830 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_09835 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_09840 PF08402 TOBE domain AVCG78_09840 PF00005 ABC transporter AVCG78_09845 PF13426 PAS domain AVCG78_09845 PF08447 PAS fold AVCG78_09845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_09855 PF00155 Aminotransferase class I and II AVCG78_09860 PF00196 Bacterial regulatory proteins, luxR family AVCG78_09860 PF03472 Autoinducer binding domain AVCG78_09865 PF01381 Helix-turn-helix AVCG78_09880 PF00376 MerR family regulatory protein AVCG78_09880 PF09278 MerR, DNA binding AVCG78_09895 PF02574 Homocysteine S-methyltransferase AVCG78_09895 PF02607 B12 binding domain AVCG78_09895 PF02310 B12 binding domain AVCG78_09895 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVCG78_09895 PF00809 Pterin binding enzyme AVCG78_09915 PF00565 Staphylococcal nuclease homologue AVCG78_09925 PF00155 Aminotransferase class I and II AVCG78_09925 PF00392 Bacterial regulatory proteins, gntR family AVCG78_09930 PF00892 EamA-like transporter family AVCG78_09935 PF13505 Outer membrane protein beta-barrel domain AVCG78_09940 PF04402 Protein of unknown function (DUF541) AVCG78_09965 PF00313 'Cold-shock' DNA-binding domain AVCG78_09975 PF03275 UDP-galactopyranose mutase AVCG78_10000 PF01894 Uncharacterised protein family UPF0047 AVCG78_10005 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_10005 PF00563 EAL domain AVCG78_10005 PF13185 GAF domain AVCG78_10015 PF03466 LysR substrate binding domain AVCG78_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_10020 PF01810 LysE type translocator AVCG78_10030 PF07687 Peptidase dimerisation domain AVCG78_10030 PF01546 Peptidase family M20/M25/M40 AVCG78_10050 PF03979 Sigma-70 factor, region 1.1 AVCG78_10050 PF04542 Sigma-70 region 2 AVCG78_10050 PF04539 Sigma-70 region 3 AVCG78_10050 PF04545 Sigma-70, region 4 AVCG78_10050 PF04546 Sigma-70, non-essential region AVCG78_10050 PF00140 Sigma-70 factor, region 1.2 AVCG78_10055 PF10410 DnaB-helicase binding domain of primase AVCG78_10055 PF08278 DNA primase DnaG DnaB-binding AVCG78_10055 PF08275 DNA primase catalytic core, N-terminal domain AVCG78_10055 PF01807 CHC2 zinc finger AVCG78_10060 PF02632 BioY family AVCG78_10065 PF06968 Biotin and Thiamin Synthesis associated domain AVCG78_10065 PF04055 Radical SAM superfamily AVCG78_10075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVCG78_10075 PF00117 Glutamine amidotransferase class-I AVCG78_10080 PF01554 MatE AVCG78_10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_10085 PF03466 LysR substrate binding domain AVCG78_10090 PF00248 Aldo/keto reductase family AVCG78_10095 PF04228 Putative neutral zinc metallopeptidase AVCG78_10110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_10110 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVCG78_10110 PF02142 MGS-like domain AVCG78_10120 PF01272 Transcription elongation factor, GreA/GreB, C-term AVCG78_10120 PF03449 Transcription elongation factor, N-terminal AVCG78_10125 PF00534 Glycosyl transferases group 1 AVCG78_10155 PF01037 Lrp/AsnC ligand binding domain AVCG78_10160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_10165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_10165 PF03466 LysR substrate binding domain AVCG78_10175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVCG78_10185 PF03466 LysR substrate binding domain AVCG78_10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_10195 PF01699 Sodium/calcium exchanger protein AVCG78_10205 PF00155 Aminotransferase class I and II AVCG78_10225 PF00313 'Cold-shock' DNA-binding domain AVCG78_10230 PF00753 Metallo-beta-lactamase superfamily AVCG78_10240 PF12802 MarR family AVCG78_10245 PF00486 Transcriptional regulatory protein, C terminal AVCG78_10245 PF00072 Response regulator receiver domain AVCG78_10250 PF16527 Two-component sensor protein CpxA, periplasmic domain AVCG78_10250 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_10250 PF00672 HAMP domain AVCG78_10255 PF01588 Putative tRNA binding domain AVCG78_10260 PF03807 NADP oxidoreductase coenzyme F420-dependent AVCG78_10260 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVCG78_10275 PF01790 Prolipoprotein diacylglyceryl transferase AVCG78_10285 PF02578 Multi-copper polyphenol oxidoreductase laccase AVCG78_10290 PF00557 Metallopeptidase family M24 AVCG78_10290 PF05195 Aminopeptidase P, N-terminal domain AVCG78_10305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVCG78_10305 PF14572 Phosphoribosyl synthetase-associated domain AVCG78_10320 PF00171 Aldehyde dehydrogenase family AVCG78_10325 PF02954 Bacterial regulatory protein, Fis family AVCG78_10325 PF13426 PAS domain AVCG78_10325 PF00158 Sigma-54 interaction domain AVCG78_10330 PF14693 Ribosomal protein TL5, C-terminal domain AVCG78_10330 PF01386 Ribosomal L25p family AVCG78_10335 PF00563 EAL domain AVCG78_10335 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_10335 PF03707 Bacterial signalling protein N terminal repeat AVCG78_10345 PF01195 Peptidyl-tRNA hydrolase AVCG78_10360 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVCG78_10365 PF01926 50S ribosome-binding GTPase AVCG78_10365 PF06071 Protein of unknown function (DUF933) AVCG78_10385 PF00255 Glutathione peroxidase AVCG78_10390 PF12833 Helix-turn-helix domain AVCG78_10390 PF14525 AraC-binding-like domain AVCG78_10400 PF00156 Phosphoribosyl transferase domain AVCG78_10405 PF02167 Cytochrome C1 family AVCG78_10405 PF00032 Cytochrome b(C-terminal)/b6/petD AVCG78_10405 PF00033 Cytochrome b/b6/petB AVCG78_10410 PF00032 Cytochrome b(C-terminal)/b6/petD AVCG78_10410 PF00033 Cytochrome b/b6/petB AVCG78_10415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVCG78_10415 PF00355 Rieske [2Fe-2S] domain AVCG78_10435 PF09857 Putative toxin of bacterial toxin-antitoxin pair AVCG78_10440 PF00005 ABC transporter AVCG78_10440 PF00664 ABC transporter transmembrane region AVCG78_10445 PF00664 ABC transporter transmembrane region AVCG78_10445 PF00005 ABC transporter AVCG78_10450 PF00588 SpoU rRNA Methylase family AVCG78_10460 PF00669 Bacterial flagellin N-terminal helical region AVCG78_10460 PF00700 Bacterial flagellin C-terminal helical region AVCG78_10470 PF01218 Coproporphyrinogen III oxidase AVCG78_10485 PF01743 Poly A polymerase head domain AVCG78_10485 PF12627 Probable RNA and SrmB- binding site of polymerase A AVCG78_10485 PF13735 tRNA nucleotidyltransferase domain 2 putative AVCG78_10490 PF00293 NUDIX domain AVCG78_10500 PF07726 ATPase family associated with various cellular activities (AAA) AVCG78_10500 PF17863 AAA lid domain AVCG78_10525 PF00583 Acetyltransferase (GNAT) family AVCG78_10550 PF13409 Glutathione S-transferase, N-terminal domain AVCG78_10555 PF13344 Haloacid dehalogenase-like hydrolase AVCG78_10555 PF00293 NUDIX domain AVCG78_10565 PF00574 Clp protease AVCG78_10570 PF03594 Benzoate membrane transport protein AVCG78_10575 PF08502 LeuA allosteric (dimerisation) domain AVCG78_10575 PF00682 HMGL-like AVCG78_10590 PF01037 Lrp/AsnC ligand binding domain AVCG78_10590 PF13404 AsnC-type helix-turn-helix domain AVCG78_10605 PF04717 Type VI secretion system, phage-baseplate injector AVCG78_10630 PF00425 chorismate binding enzyme AVCG78_10630 PF00117 Glutamine amidotransferase class-I AVCG78_10630 PF04715 Anthranilate synthase component I, N terminal region AVCG78_10640 PF16916 Dimerisation domain of Zinc Transporter AVCG78_10640 PF01545 Cation efflux family AVCG78_10645 PF14489 QueF-like protein AVCG78_10655 PF04955 HupE / UreJ protein AVCG78_10660 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVCG78_10675 PF01268 Formate--tetrahydrofolate ligase AVCG78_10685 PF00196 Bacterial regulatory proteins, luxR family AVCG78_10685 PF03472 Autoinducer binding domain AVCG78_10700 PF00265 Thymidine kinase AVCG78_10710 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_10715 PF00005 ABC transporter AVCG78_10715 PF00571 CBS domain AVCG78_10725 PF01022 Bacterial regulatory protein, arsR family AVCG78_10735 PF00202 Aminotransferase class-III AVCG78_10745 PF13458 Periplasmic binding protein AVCG78_10760 PF13382 Adenine deaminase C-terminal domain AVCG78_10760 PF01979 Amidohydrolase family AVCG78_10770 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AVCG78_10775 PF00128 Alpha amylase, catalytic domain AVCG78_10780 PF13439 Glycosyltransferase Family 4 AVCG78_10780 PF00534 Glycosyl transferases group 1 AVCG78_10785 PF01926 50S ribosome-binding GTPase AVCG78_10785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVCG78_10805 PF05992 SbmA/BacA-like family AVCG78_10820 PF00557 Metallopeptidase family M24 AVCG78_10825 PF00296 Luciferase-like monooxygenase AVCG78_10830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG78_10830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG78_10840 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_10840 PF01799 [2Fe-2S] binding domain AVCG78_10845 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG78_10845 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG78_10855 PF13181 Tetratricopeptide repeat AVCG78_10860 PF03466 LysR substrate binding domain AVCG78_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_10870 PF01979 Amidohydrolase family AVCG78_10880 PF00005 ABC transporter AVCG78_10885 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_10890 PF00764 Arginosuccinate synthase AVCG78_10895 PF01037 Lrp/AsnC ligand binding domain AVCG78_10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_10910 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_10915 PF00072 Response regulator receiver domain AVCG78_10915 PF00486 Transcriptional regulatory protein, C terminal AVCG78_10925 PF00576 HIUase/Transthyretin family AVCG78_10930 PF04115 Ureidoglycolate lyase AVCG78_10935 PF00501 AMP-binding enzyme AVCG78_10935 PF13193 AMP-binding enzyme C-terminal domain AVCG78_10935 PF00668 Condensation domain AVCG78_10935 PF00550 Phosphopantetheine attachment site AVCG78_10935 PF00975 Thioesterase domain AVCG78_10940 PF00120 Glutamine synthetase, catalytic domain AVCG78_10940 PF03951 Glutamine synthetase, beta-Grasp domain AVCG78_10950 PF09349 OHCU decarboxylase AVCG78_10950 PF01014 Uricase AVCG78_10955 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_10955 PF00107 Zinc-binding dehydrogenase AVCG78_10970 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_10985 PF01266 FAD dependent oxidoreductase AVCG78_10990 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVCG78_10990 PF01266 FAD dependent oxidoreductase AVCG78_10995 PF00672 HAMP domain AVCG78_10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_10995 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_10995 PF00072 Response regulator receiver domain AVCG78_10995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVCG78_10995 PF01627 Hpt domain AVCG78_11005 PF00270 DEAD/DEAH box helicase AVCG78_11005 PF00271 Helicase conserved C-terminal domain AVCG78_11010 PF05199 GMC oxidoreductase AVCG78_11010 PF00732 GMC oxidoreductase AVCG78_11015 PF00596 Class II Aldolase and Adducin N-terminal domain AVCG78_11015 PF00464 Serine hydroxymethyltransferase AVCG78_11020 PF01638 HxlR-like helix-turn-helix AVCG78_11150 PF05069 Phage virion morphogenesis family AVCG78_11285 PF00005 ABC transporter AVCG78_11300 PF12802 MarR family AVCG78_11310 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_11310 PF00107 Zinc-binding dehydrogenase AVCG78_11315 PF03466 LysR substrate binding domain AVCG78_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_11325 PF04168 A predicted alpha-helical domain with a conserved ER motif. AVCG78_11325 PF14403 Circularly permuted ATP-grasp type 2 AVCG78_11330 PF14403 Circularly permuted ATP-grasp type 2 AVCG78_11345 PF02796 Helix-turn-helix domain of resolvase AVCG78_11345 PF00239 Resolvase, N terminal domain AVCG78_11360 PF01152 Bacterial-like globin AVCG78_11380 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVCG78_11380 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_11385 PF01180 Dihydroorotate dehydrogenase AVCG78_11390 PF03707 Bacterial signalling protein N terminal repeat AVCG78_11390 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_11390 PF00563 EAL domain AVCG78_11400 PF00440 Bacterial regulatory proteins, tetR family AVCG78_11400 PF08362 YcdC-like protein, C-terminal region AVCG78_11405 PF01546 Peptidase family M20/M25/M40 AVCG78_11405 PF07687 Peptidase dimerisation domain AVCG78_11410 PF01979 Amidohydrolase family AVCG78_11420 PF00005 ABC transporter AVCG78_11425 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_11430 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_11445 PF00873 AcrB/AcrD/AcrF family AVCG78_11455 PF00753 Metallo-beta-lactamase superfamily AVCG78_11460 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG78_11465 PF01730 UreF AVCG78_11470 PF02814 UreE urease accessory protein, N-terminal domain AVCG78_11470 PF05194 UreE urease accessory protein, C-terminal domain AVCG78_11475 PF00563 EAL domain AVCG78_11475 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_11475 PF08448 PAS fold AVCG78_11480 PF08534 Redoxin AVCG78_11495 PF01979 Amidohydrolase family AVCG78_11495 PF00449 Urease alpha-subunit, N-terminal domain AVCG78_11505 PF07007 Lysozyme inhibitor LprI AVCG78_11510 PF00699 Urease beta subunit AVCG78_11515 PF06906 Protein of unknown function (DUF1272) AVCG78_11520 PF00547 Urease, gamma subunit AVCG78_11525 PF01774 UreD urease accessory protein AVCG78_11540 PF00005 ABC transporter AVCG78_11545 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG78_11545 PF00005 ABC transporter AVCG78_11555 PF02653 Branched-chain amino acid transport system / permease component AVCG78_11565 PF01126 Heme oxygenase AVCG78_11570 PF08446 PAS fold AVCG78_11570 PF00360 Phytochrome region AVCG78_11570 PF01590 GAF domain AVCG78_11570 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_11580 PF09308 LuxQ, periplasmic AVCG78_11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_11580 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_11580 PF00072 Response regulator receiver domain AVCG78_11585 PF00072 Response regulator receiver domain AVCG78_11605 PF03776 Septum formation topological specificity factor MinE AVCG78_11610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVCG78_11615 PF03775 Septum formation inhibitor MinC, C-terminal domain AVCG78_11620 PF13458 Periplasmic binding protein AVCG78_11630 PF00005 ABC transporter AVCG78_11635 PF00005 ABC transporter AVCG78_11635 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG78_11640 PF02653 Branched-chain amino acid transport system / permease component AVCG78_11640 PF11862 Domain of unknown function (DUF3382) AVCG78_11645 PF02653 Branched-chain amino acid transport system / permease component AVCG78_11655 PF00440 Bacterial regulatory proteins, tetR family AVCG78_11660 PF07690 Major Facilitator Superfamily AVCG78_11665 PF00009 Elongation factor Tu GTP binding domain AVCG78_11670 PF00459 Inositol monophosphatase family AVCG78_11680 PF02397 Bacterial sugar transferase AVCG78_11695 PF00072 Response regulator receiver domain AVCG78_11695 PF00486 Transcriptional regulatory protein, C terminal AVCG78_11700 PF00196 Bacterial regulatory proteins, luxR family AVCG78_11700 PF00072 Response regulator receiver domain AVCG78_11705 PF10090 Histidine phosphotransferase C-terminal domain AVCG78_11725 PF00588 SpoU rRNA Methylase family AVCG78_11735 PF00849 RNA pseudouridylate synthase AVCG78_11740 PF01266 FAD dependent oxidoreductase AVCG78_11740 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVCG78_11745 PF04542 Sigma-70 region 2 AVCG78_11745 PF04545 Sigma-70, region 4 AVCG78_11745 PF00140 Sigma-70 factor, region 1.2 AVCG78_11755 PF02040 Arsenical pump membrane protein AVCG78_11770 PF00709 Adenylosuccinate synthetase AVCG78_11780 PF00149 Calcineurin-like phosphoesterase AVCG78_11785 PF02633 Creatinine amidohydrolase AVCG78_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_11790 PF03466 LysR substrate binding domain AVCG78_11800 PF00005 ABC transporter AVCG78_11810 PF07969 Amidohydrolase family AVCG78_11815 PF01565 FAD binding domain AVCG78_11815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVCG78_11820 PF02525 Flavodoxin-like fold AVCG78_11840 PF00171 Aldehyde dehydrogenase family AVCG78_11845 PF03167 Uracil DNA glycosylase superfamily AVCG78_11850 PF03328 HpcH/HpaI aldolase/citrate lyase family AVCG78_11880 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_11885 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_11890 PF00005 ABC transporter AVCG78_11890 PF08402 TOBE domain AVCG78_11900 PF01232 Mannitol dehydrogenase Rossmann domain AVCG78_11900 PF08125 Mannitol dehydrogenase C-terminal domain AVCG78_11905 PF13419 Haloacid dehalogenase-like hydrolase AVCG78_11910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG78_11910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG78_11925 PF07715 TonB-dependent Receptor Plug Domain AVCG78_11925 PF00593 TonB dependent receptor AVCG78_11935 PF04199 Putative cyclase AVCG78_11945 PF01032 FecCD transport family AVCG78_11955 PF00005 ABC transporter AVCG78_11965 PF00593 TonB dependent receptor AVCG78_11965 PF07715 TonB-dependent Receptor Plug Domain AVCG78_11990 PF02322 Cytochrome bd terminal oxidase subunit II AVCG78_11995 PF01654 Cytochrome bd terminal oxidase subunit I AVCG78_12000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG78_12000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_12000 PF01842 ACT domain AVCG78_12020 PF13505 Outer membrane protein beta-barrel domain AVCG78_12025 PF00296 Luciferase-like monooxygenase AVCG78_12030 PF02075 Crossover junction endodeoxyribonuclease RuvC AVCG78_12035 PF07499 RuvA, C-terminal domain AVCG78_12035 PF01330 RuvA N terminal domain AVCG78_12040 PF15937 prlF antitoxin for toxin YhaV_toxin AVCG78_12050 PF17864 RuvB AAA lid domain AVCG78_12050 PF05491 RuvB C-terminal winged helix domain AVCG78_12050 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVCG78_12055 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG78_12055 PF00149 Calcineurin-like phosphoesterase AVCG78_12060 PF00293 NUDIX domain AVCG78_12065 PF00293 NUDIX domain AVCG78_12075 PF03061 Thioesterase superfamily AVCG78_12080 PF01618 MotA/TolQ/ExbB proton channel family AVCG78_12085 PF02472 Biopolymer transport protein ExbD/TolR AVCG78_12095 PF07676 WD40-like Beta Propeller Repeat AVCG78_12095 PF04052 TolB amino-terminal domain AVCG78_12100 PF00691 OmpA family AVCG78_12110 PF01171 PP-loop family AVCG78_12115 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_12115 PF01434 Peptidase family M41 AVCG78_12115 PF06480 FtsH Extracellular AVCG78_12115 PF17862 AAA+ lid domain AVCG78_12120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVCG78_12120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVCG78_12120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVCG78_12120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVCG78_12125 PF01709 Transcriptional regulator AVCG78_12140 PF00999 Sodium/hydrogen exchanger family AVCG78_12140 PF02080 TrkA-C domain AVCG78_12140 PF03471 Transporter associated domain AVCG78_12160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVCG78_12160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVCG78_12165 PF00456 Transketolase, thiamine diphosphate binding domain AVCG78_12165 PF02780 Transketolase, C-terminal domain AVCG78_12165 PF02779 Transketolase, pyrimidine binding domain AVCG78_12190 PF00672 HAMP domain AVCG78_12190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_12190 PF02203 Tar ligand binding domain homologue AVCG78_12195 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVCG78_12200 PF13277 YmdB-like protein AVCG78_12205 PF00162 Phosphoglycerate kinase AVCG78_12210 PF00274 Fructose-bisphosphate aldolase class-I AVCG78_12215 PF02567 Phenazine biosynthesis-like protein AVCG78_12250 PF01197 Ribosomal protein L31 AVCG78_12255 PF00664 ABC transporter transmembrane region AVCG78_12255 PF00005 ABC transporter AVCG78_12260 PF00890 FAD binding domain AVCG78_12265 PF00691 OmpA family AVCG78_12265 PF01389 OmpA-like transmembrane domain AVCG78_12275 PF00459 Inositol monophosphatase family AVCG78_12285 PF02581 Thiamine monophosphate synthase AVCG78_12295 PF01022 Bacterial regulatory protein, arsR family AVCG78_12310 PF00731 AIR carboxylase AVCG78_12315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVCG78_12315 PF02222 ATP-grasp domain AVCG78_12320 PF00444 Ribosomal protein L36 AVCG78_12330 PF12697 Alpha/beta hydrolase family AVCG78_12335 PF02887 Pyruvate kinase, alpha/beta domain AVCG78_12335 PF00224 Pyruvate kinase, barrel domain AVCG78_12355 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AVCG78_12360 PF03466 LysR substrate binding domain AVCG78_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_12365 PF03547 Membrane transport protein AVCG78_12375 PF00072 Response regulator receiver domain AVCG78_12375 PF00158 Sigma-54 interaction domain AVCG78_12375 PF02954 Bacterial regulatory protein, Fis family AVCG78_12385 PF04715 Anthranilate synthase component I, N terminal region AVCG78_12385 PF00425 chorismate binding enzyme AVCG78_12385 PF00117 Glutamine amidotransferase class-I AVCG78_12390 PF01063 Amino-transferase class IV AVCG78_12400 PF16653 Saccharopine dehydrogenase C-terminal domain AVCG78_12400 PF03435 Saccharopine dehydrogenase NADP binding domain AVCG78_12410 PF02872 5'-nucleotidase, C-terminal domain AVCG78_12410 PF00149 Calcineurin-like phosphoesterase AVCG78_12415 PF00762 Ferrochelatase AVCG78_12420 PF01757 Acyltransferase family AVCG78_12425 PF02203 Tar ligand binding domain homologue AVCG78_12425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_12425 PF00672 HAMP domain AVCG78_12435 PF04055 Radical SAM superfamily AVCG78_12440 PF01242 6-pyruvoyl tetrahydropterin synthase AVCG78_12445 PF06508 Queuosine biosynthesis protein QueC AVCG78_12450 PF01145 SPFH domain / Band 7 family AVCG78_12450 PF16200 C-terminal region of band_7 AVCG78_12460 PF01380 SIS domain AVCG78_12460 PF00571 CBS domain AVCG78_12470 PF00483 Nucleotidyl transferase AVCG78_12475 PF13406 Transglycosylase SLT domain AVCG78_12485 PF00672 HAMP domain AVCG78_12485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_12485 PF02203 Tar ligand binding domain homologue AVCG78_12490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVCG78_12490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_12500 PF01850 PIN domain AVCG78_12510 PF00310 Glutamine amidotransferases class-II AVCG78_12510 PF04898 Glutamate synthase central domain AVCG78_12510 PF01645 Conserved region in glutamate synthase AVCG78_12510 PF01493 GXGXG motif AVCG78_12515 PF01212 Beta-eliminating lyase AVCG78_12520 PF00011 Hsp20/alpha crystallin family AVCG78_12535 PF00459 Inositol monophosphatase family AVCG78_12545 PF00072 Response regulator receiver domain AVCG78_12555 PF00924 Mechanosensitive ion channel AVCG78_12560 PF01050 Mannose-6-phosphate isomerase AVCG78_12560 PF00483 Nucleotidyl transferase AVCG78_12570 PF04168 A predicted alpha-helical domain with a conserved ER motif. AVCG78_12570 PF14403 Circularly permuted ATP-grasp type 2 AVCG78_12575 PF08379 Bacterial transglutaminase-like N-terminal region AVCG78_12575 PF01841 Transglutaminase-like superfamily AVCG78_12590 PF00343 Carbohydrate phosphorylase AVCG78_12595 PF00128 Alpha amylase, catalytic domain AVCG78_12595 PF02806 Alpha amylase, C-terminal all-beta domain AVCG78_12595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG78_12600 PF00483 Nucleotidyl transferase AVCG78_12605 PF08323 Starch synthase catalytic domain AVCG78_12605 PF00534 Glycosyl transferases group 1 AVCG78_12610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVCG78_12610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVCG78_12610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVCG78_12610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVCG78_12615 PF00128 Alpha amylase, catalytic domain AVCG78_12615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG78_12615 PF18390 Glycogen debranching enzyme C-terminal domain AVCG78_12620 PF01575 MaoC like domain AVCG78_12630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVCG78_12650 PF01165 Ribosomal protein S21 AVCG78_12655 PF01266 FAD dependent oxidoreductase AVCG78_12665 PF01571 Aminomethyltransferase folate-binding domain AVCG78_12665 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG78_12665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_12665 PF17806 Sarcosine oxidase A3 domain AVCG78_12670 PF04268 Sarcosine oxidase, gamma subunit family AVCG78_12680 PF01638 HxlR-like helix-turn-helix AVCG78_12685 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AVCG78_12690 PF04221 RelB antitoxin AVCG78_12700 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AVCG78_12720 PF03480 Bacterial extracellular solute-binding protein, family 7 AVCG78_12725 PF07722 Peptidase C26 AVCG78_12730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG78_12730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_12735 PF00356 Bacterial regulatory proteins, lacI family AVCG78_12740 PF01047 MarR family AVCG78_12745 PF02633 Creatinine amidohydrolase AVCG78_12750 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG78_12750 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG78_12760 PF00672 HAMP domain AVCG78_12760 PF02203 Tar ligand binding domain homologue AVCG78_12760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_12765 PF03922 OmpW family AVCG78_12775 PF03150 Di-haem cytochrome c peroxidase AVCG78_12785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG78_12785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG78_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_12790 PF03466 LysR substrate binding domain AVCG78_12820 PF01081 KDPG and KHG aldolase AVCG78_12825 PF01928 CYTH domain AVCG78_12835 PF08279 HTH domain AVCG78_12835 PF13280 WYL domain AVCG78_12845 PF17773 UPF0176 acylphosphatase like domain AVCG78_12845 PF00581 Rhodanese-like domain AVCG78_12850 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_12850 PF00563 EAL domain AVCG78_12850 PF13426 PAS domain AVCG78_12860 PF00232 Glycosyl hydrolase family 1 AVCG78_12870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_12870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_12880 PF01261 Xylose isomerase-like TIM barrel AVCG78_12885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG78_12885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG78_12890 PF00356 Bacterial regulatory proteins, lacI family AVCG78_12895 PF07690 Major Facilitator Superfamily AVCG78_12900 PF13533 Biotin-lipoyl like AVCG78_12905 PF17922 Tetracyclin repressor-like, C-terminal domain AVCG78_12905 PF00440 Bacterial regulatory proteins, tetR family AVCG78_12910 PF03471 Transporter associated domain AVCG78_12910 PF03741 Integral membrane protein TerC family AVCG78_12920 PF00633 Helix-hairpin-helix motif AVCG78_12920 PF10576 Iron-sulfur binding domain of endonuclease III AVCG78_12920 PF00730 HhH-GPD superfamily base excision DNA repair protein AVCG78_12930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVCG78_12930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVCG78_12940 PF13936 Helix-turn-helix domain AVCG78_12940 PF04198 Putative sugar-binding domain AVCG78_12945 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVCG78_12965 PF01336 OB-fold nucleic acid binding domain AVCG78_12965 PF00152 tRNA synthetases class II (D, K and N) AVCG78_12970 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVCG78_12975 PF03600 Citrate transporter AVCG78_12975 PF02080 TrkA-C domain AVCG78_12990 PF00664 ABC transporter transmembrane region AVCG78_12990 PF00005 ABC transporter AVCG78_12990 PF03412 Peptidase C39 family AVCG78_13025 PF00005 ABC transporter AVCG78_13025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_13030 PF07687 Peptidase dimerisation domain AVCG78_13030 PF01546 Peptidase family M20/M25/M40 AVCG78_13035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_13040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_13045 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13050 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13050 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_13060 PF00005 ABC transporter AVCG78_13065 PF13533 Biotin-lipoyl like AVCG78_13070 PF03576 Peptidase family S58 AVCG78_13075 PF07969 Amidohydrolase family AVCG78_13080 PF00005 ABC transporter AVCG78_13080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_13085 PF00005 ABC transporter AVCG78_13085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_13090 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13090 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_13095 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_13105 PF01244 Membrane dipeptidase (Peptidase family M19) AVCG78_13110 PF00294 pfkB family carbohydrate kinase AVCG78_13115 PF07729 FCD domain AVCG78_13115 PF00392 Bacterial regulatory proteins, gntR family AVCG78_13120 PF02614 Glucuronate isomerase AVCG78_13125 PF07883 Cupin domain AVCG78_13130 PF04962 KduI/IolB family AVCG78_13140 PF08125 Mannitol dehydrogenase C-terminal domain AVCG78_13140 PF01232 Mannitol dehydrogenase Rossmann domain AVCG78_13145 PF03786 D-mannonate dehydratase (UxuA) AVCG78_13150 PF08666 SAF domain AVCG78_13150 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AVCG78_13160 PF02233 NAD(P) transhydrogenase beta subunit AVCG78_13165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVCG78_13165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVCG78_13165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVCG78_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_13170 PF03466 LysR substrate binding domain AVCG78_13175 PF13407 Periplasmic binding protein domain AVCG78_13180 PF00005 ABC transporter AVCG78_13185 PF02653 Branched-chain amino acid transport system / permease component AVCG78_13195 PF00920 Dehydratase family AVCG78_13200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_13205 PF00171 Aldehyde dehydrogenase family AVCG78_13210 PF05035 2-keto-3-deoxy-galactonokinase AVCG78_13215 PF01081 KDPG and KHG aldolase AVCG78_13220 PF04304 Protein of unknown function (DUF454) AVCG78_13225 PF00892 EamA-like transporter family AVCG78_13230 PF00392 Bacterial regulatory proteins, gntR family AVCG78_13230 PF07729 FCD domain AVCG78_13235 PF07690 Major Facilitator Superfamily AVCG78_13245 PF00912 Transglycosylase AVCG78_13245 PF06832 Penicillin-Binding Protein C-terminus Family AVCG78_13245 PF00905 Penicillin binding protein transpeptidase domain AVCG78_13250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_13250 PF00672 HAMP domain AVCG78_13255 PF16363 GDP-mannose 4,6 dehydratase AVCG78_13260 PF04101 Glycosyltransferase family 28 C-terminal domain AVCG78_13260 PF03033 Glycosyltransferase family 28 N-terminal domain AVCG78_13265 PF13439 Glycosyltransferase Family 4 AVCG78_13265 PF00534 Glycosyl transferases group 1 AVCG78_13275 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_13275 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13280 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_13290 PF00005 ABC transporter AVCG78_13290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_13305 PF00534 Glycosyl transferases group 1 AVCG78_13305 PF13439 Glycosyltransferase Family 4 AVCG78_13310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVCG78_13310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVCG78_13310 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVCG78_13325 PF00005 ABC transporter AVCG78_13325 PF00664 ABC transporter transmembrane region AVCG78_13330 PF12320 Type 5 capsule protein repressor C-terminal domain AVCG78_13330 PF00149 Calcineurin-like phosphoesterase AVCG78_13335 PF13476 AAA domain AVCG78_13340 PF00672 HAMP domain AVCG78_13340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_13340 PF02203 Tar ligand binding domain homologue AVCG78_13380 PF01259 SAICAR synthetase AVCG78_13385 PF08361 MAATS-type transcriptional repressor, C-terminal region AVCG78_13385 PF00440 Bacterial regulatory proteins, tetR family AVCG78_13390 PF00529 HlyD membrane-fusion protein of T1SS AVCG78_13390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG78_13395 PF00873 AcrB/AcrD/AcrF family AVCG78_13400 PF02321 Outer membrane efflux protein AVCG78_13405 PF01132 Elongation factor P (EF-P) OB domain AVCG78_13405 PF09285 Elongation factor P, C-terminal AVCG78_13405 PF08207 Elongation factor P (EF-P) KOW-like domain AVCG78_13410 PF00152 tRNA synthetases class II (D, K and N) AVCG78_13415 PF04055 Radical SAM superfamily AVCG78_13415 PF12544 Lysine-2,3-aminomutase AVCG78_13420 PF00550 Phosphopantetheine attachment site AVCG78_13460 PF13439 Glycosyltransferase Family 4 AVCG78_13460 PF00534 Glycosyl transferases group 1 AVCG78_13475 PF00150 Cellulase (glycosyl hydrolase family 5) AVCG78_13480 PF00551 Formyl transferase AVCG78_13485 PF00202 Aminotransferase class-III AVCG78_13495 PF13411 MerR HTH family regulatory protein AVCG78_13505 PF04679 ATP dependent DNA ligase C terminal region AVCG78_13505 PF01068 ATP dependent DNA ligase domain AVCG78_13505 PF04675 DNA ligase N terminus AVCG78_13525 PF00210 Ferritin-like domain AVCG78_13535 PF00072 Response regulator receiver domain AVCG78_13540 PF07536 HWE histidine kinase AVCG78_13540 PF08447 PAS fold AVCG78_13540 PF13426 PAS domain AVCG78_13545 PF15887 Putative zinc-binding metallo-peptidase AVCG78_13545 PF10005 zinc-ribbon domain AVCG78_13565 PF08281 Sigma-70, region 4 AVCG78_13565 PF04542 Sigma-70 region 2 AVCG78_13575 PF00027 Cyclic nucleotide-binding domain AVCG78_13575 PF13545 Crp-like helix-turn-helix domain AVCG78_13585 PF01618 MotA/TolQ/ExbB proton channel family AVCG78_13590 PF02472 Biopolymer transport protein ExbD/TolR AVCG78_13600 PF07470 Glycosyl Hydrolase Family 88 AVCG78_13605 PF01679 Proteolipid membrane potential modulator AVCG78_13610 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVCG78_13615 PF00491 Arginase family AVCG78_13635 PF00480 ROK family AVCG78_13640 PF13407 Periplasmic binding protein domain AVCG78_13645 PF02653 Branched-chain amino acid transport system / permease component AVCG78_13650 PF00005 ABC transporter AVCG78_13655 PF00485 Phosphoribulokinase / Uridine kinase family AVCG78_13660 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_13665 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13670 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_13675 PF00005 ABC transporter AVCG78_13685 PF00296 Luciferase-like monooxygenase AVCG78_13690 PF01979 Amidohydrolase family AVCG78_13695 PF01979 Amidohydrolase family AVCG78_13700 PF00221 Aromatic amino acid lyase AVCG78_13710 PF17391 Urocanase N-terminal domain AVCG78_13710 PF17392 Urocanase C-terminal domain AVCG78_13710 PF01175 Urocanase Rossmann-like domain AVCG78_13715 PF05962 HutD AVCG78_13725 PF00171 Aldehyde dehydrogenase family AVCG78_13730 PF04632 Fusaric acid resistance protein family AVCG78_13735 PF03055 Retinal pigment epithelial membrane protein AVCG78_13745 PF02563 Polysaccharide biosynthesis/export protein AVCG78_13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_13750 PF03466 LysR substrate binding domain AVCG78_13755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG78_13760 PF01738 Dienelactone hydrolase family AVCG78_13785 PF02563 Polysaccharide biosynthesis/export protein AVCG78_13790 PF02397 Bacterial sugar transferase AVCG78_13795 PF11089 Exopolysaccharide production repressor AVCG78_13800 PF00535 Glycosyl transferase family 2 AVCG78_13805 PF04230 Polysaccharide pyruvyl transferase AVCG78_13810 PF00535 Glycosyl transferase family 2 AVCG78_13815 PF01943 Polysaccharide biosynthesis protein AVCG78_13825 PF00722 Glycosyl hydrolases family 16 AVCG78_13835 PF00535 Glycosyl transferase family 2 AVCG78_13840 PF00535 Glycosyl transferase family 2 AVCG78_13845 PF00535 Glycosyl transferase family 2 AVCG78_13850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVCG78_13850 PF13807 G-rich domain on putative tyrosine kinase AVCG78_13850 PF02706 Chain length determinant protein AVCG78_13900 PF01551 Peptidase family M23 AVCG78_13900 PF08460 Bacterial SH3 domain AVCG78_13905 PF07724 AAA domain (Cdc48 subfamily) AVCG78_13905 PF17871 AAA lid domain AVCG78_13905 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_13905 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG78_13905 PF02861 Clp amino terminal domain, pathogenicity island component AVCG78_13915 PF05175 Methyltransferase small domain AVCG78_13915 PF17827 PrmC N-terminal domain AVCG78_13920 PF00472 RF-1 domain AVCG78_13920 PF03462 PCRF domain AVCG78_13925 PF05524 PEP-utilising enzyme, N-terminal AVCG78_13925 PF01590 GAF domain AVCG78_13925 PF02896 PEP-utilising enzyme, TIM barrel domain AVCG78_13925 PF00391 PEP-utilising enzyme, mobile domain AVCG78_13930 PF01842 ACT domain AVCG78_13930 PF00696 Amino acid kinase family AVCG78_13930 PF13840 ACT domain AVCG78_13935 PF09924 Uncharacterised conserved protein (DUF2156) AVCG78_13935 PF03706 Lysylphosphatidylglycerol synthase TM region AVCG78_13950 PF08241 Methyltransferase domain AVCG78_13965 PF00795 Carbon-nitrogen hydrolase AVCG78_13970 PF00462 Glutaredoxin AVCG78_13975 PF00156 Phosphoribosyl transferase domain AVCG78_13980 PF08241 Methyltransferase domain AVCG78_13995 PF00293 NUDIX domain AVCG78_14005 PF01960 ArgJ family AVCG78_14015 PF02810 SEC-C motif AVCG78_14015 PF07517 SecA DEAD-like domain AVCG78_14015 PF01043 SecA preprotein cross-linking domain AVCG78_14015 PF07516 SecA Wing and Scaffold domain AVCG78_14030 PF00501 AMP-binding enzyme AVCG78_14030 PF13193 AMP-binding enzyme C-terminal domain AVCG78_14040 PF17151 Periplasmic sensor domain AVCG78_14040 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_14045 PF04717 Type VI secretion system, phage-baseplate injector AVCG78_14080 PF00248 Aldo/keto reductase family AVCG78_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_14085 PF03466 LysR substrate binding domain AVCG78_14125 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVCG78_14135 PF00106 short chain dehydrogenase AVCG78_14145 PF01923 Cobalamin adenosyltransferase AVCG78_14150 PF01012 Electron transfer flavoprotein domain AVCG78_14155 PF01012 Electron transfer flavoprotein domain AVCG78_14155 PF00766 Electron transfer flavoprotein FAD-binding domain AVCG78_14160 PF00672 HAMP domain AVCG78_14160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_14165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVCG78_14165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVCG78_14175 PF08534 Redoxin AVCG78_14180 PF00206 Lyase AVCG78_14180 PF14698 Argininosuccinate lyase C-terminal AVCG78_14190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG78_14190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG78_14200 PF00072 Response regulator receiver domain AVCG78_14205 PF00156 Phosphoribosyl transferase domain AVCG78_14215 PF00005 ABC transporter AVCG78_14235 PF04752 ChaC-like protein AVCG78_14245 PF02153 Prephenate dehydrogenase AVCG78_14250 PF00155 Aminotransferase class I and II AVCG78_14255 PF01209 ubiE/COQ5 methyltransferase family AVCG78_14260 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVCG78_14260 PF00753 Metallo-beta-lactamase superfamily AVCG78_14285 PF00830 Ribosomal L28 family AVCG78_14290 PF02592 Putative vitamin uptake transporter AVCG78_14300 PF06213 Cobalamin biosynthesis protein CobT AVCG78_14300 PF11775 Cobalamin biosynthesis protein CobT VWA domain AVCG78_14305 PF07728 AAA domain (dynein-related subfamily) AVCG78_14305 PF08406 CbbQ/NirQ/NorQ C-terminal AVCG78_14305 PF12556 Cobaltochelatase CobS subunit N terminal AVCG78_14310 PF00226 DnaJ domain AVCG78_14315 PF01722 BolA-like protein AVCG78_14320 PF01761 3-dehydroquinate synthase AVCG78_14325 PF01202 Shikimate kinase AVCG78_14335 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_14335 PF00589 Phage integrase family AVCG78_14340 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVCG78_14345 PF03734 L,D-transpeptidase catalytic domain AVCG78_14350 PF01206 Sulfurtransferase TusA AVCG78_14355 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG78_14355 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG78_14360 PF00768 D-alanyl-D-alanine carboxypeptidase AVCG78_14360 PF07943 Penicillin-binding protein 5, C-terminal domain AVCG78_14365 PF07687 Peptidase dimerisation domain AVCG78_14365 PF01546 Peptidase family M20/M25/M40 AVCG78_14375 PF01594 AI-2E family transporter AVCG78_14385 PF00196 Bacterial regulatory proteins, luxR family AVCG78_14385 PF03472 Autoinducer binding domain AVCG78_14390 PF01514 Secretory protein of YscJ/FliF family AVCG78_14390 PF08345 Flagellar M-ring protein C-terminal AVCG78_14400 PF03975 CheD chemotactic sensory transduction AVCG78_14405 PF00072 Response regulator receiver domain AVCG78_14410 PF01339 CheB methylesterase AVCG78_14410 PF00072 Response regulator receiver domain AVCG78_14415 PF01739 CheR methyltransferase, SAM binding domain AVCG78_14415 PF03705 CheR methyltransferase, all-alpha domain AVCG78_14420 PF01584 CheW-like domain AVCG78_14425 PF01627 Hpt domain AVCG78_14425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_14425 PF02895 Signal transducing histidine kinase, homodimeric domain AVCG78_14425 PF01584 CheW-like domain AVCG78_14430 PF00072 Response regulator receiver domain AVCG78_14440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_14450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVCG78_14450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVCG78_14450 PF13288 DXP reductoisomerase C-terminal domain AVCG78_14455 PF00144 Beta-lactamase AVCG78_14460 PF00155 Aminotransferase class I and II AVCG78_14470 PF07244 Surface antigen variable number repeat AVCG78_14470 PF17243 POTRA domain TamA domain 1 AVCG78_14470 PF01103 Surface antigen AVCG78_14480 PF13426 PAS domain AVCG78_14480 PF08447 PAS fold AVCG78_14480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_14485 PF01584 CheW-like domain AVCG78_14490 PF07690 Major Facilitator Superfamily AVCG78_14500 PF02634 FdhD/NarQ family AVCG78_14505 PF12838 4Fe-4S dicluster domain AVCG78_14505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG78_14505 PF00384 Molybdopterin oxidoreductase AVCG78_14505 PF01568 Molydopterin dinucleotide binding domain AVCG78_14505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVCG78_14510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVCG78_14510 PF00037 4Fe-4S binding domain AVCG78_14510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AVCG78_14520 PF03466 LysR substrate binding domain AVCG78_14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_14525 PF01022 Bacterial regulatory protein, arsR family AVCG78_14530 PF00056 lactate/malate dehydrogenase, NAD binding domain AVCG78_14530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVCG78_14535 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVCG78_14540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG78_14540 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVCG78_14545 PF00231 ATP synthase AVCG78_14550 PF00306 ATP synthase alpha/beta chain, C terminal domain AVCG78_14550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG78_14550 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVCG78_14555 PF00213 ATP synthase delta (OSCP) subunit AVCG78_14565 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVCG78_14565 PF18074 Primosomal protein N C-terminal domain AVCG78_14565 PF17764 3′ DNA-binding domain (3′BD) AVCG78_14565 PF00270 DEAD/DEAH box helicase AVCG78_14570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_14570 PF00672 HAMP domain AVCG78_14580 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_14580 PF00589 Phage integrase family AVCG78_14590 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_14590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVCG78_14595 PF01810 LysE type translocator AVCG78_14605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVCG78_14605 PF00364 Biotin-requiring enzyme AVCG78_14605 PF02817 e3 binding domain AVCG78_14610 PF16078 2-oxoglutarate dehydrogenase N-terminus AVCG78_14610 PF00676 Dehydrogenase E1 component AVCG78_14610 PF16870 2-oxoglutarate dehydrogenase C-terminal AVCG78_14610 PF02779 Transketolase, pyrimidine binding domain AVCG78_14615 PF02629 CoA binding domain AVCG78_14615 PF00549 CoA-ligase AVCG78_14625 PF00549 CoA-ligase AVCG78_14625 PF08442 ATP-grasp domain AVCG78_14630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVCG78_14630 PF00056 lactate/malate dehydrogenase, NAD binding domain AVCG78_14635 PF03969 AFG1-like ATPase AVCG78_14640 PF02974 Protease inhibitor Inh AVCG78_14645 PF13085 2Fe-2S iron-sulfur cluster binding domain AVCG78_14645 PF13237 4Fe-4S dicluster domain AVCG78_14650 PF00890 FAD binding domain AVCG78_14650 PF02910 Fumarate reductase flavoprotein C-term AVCG78_14660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVCG78_14685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVCG78_14685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVCG78_14690 PF00814 Glycoprotease family AVCG78_14695 PF03900 Porphobilinogen deaminase, C-terminal domain AVCG78_14695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVCG78_14720 PF00117 Glutamine amidotransferase class-I AVCG78_14725 PF07690 Major Facilitator Superfamily AVCG78_14730 PF02325 YGGT family AVCG78_14735 PF02594 Uncharacterised ACR, YggU family COG1872 AVCG78_14740 PF00719 Inorganic pyrophosphatase AVCG78_14750 PF00679 Elongation factor G C-terminus AVCG78_14750 PF00009 Elongation factor Tu GTP binding domain AVCG78_14750 PF03144 Elongation factor Tu domain 2 AVCG78_14755 PF16655 PhoD-like phosphatase, N-terminal domain AVCG78_14755 PF09423 PhoD-like phosphatase AVCG78_14760 PF01432 Peptidase family M3 AVCG78_14765 PF07690 Major Facilitator Superfamily AVCG78_14770 PF00764 Arginosuccinate synthase AVCG78_14775 PF00106 short chain dehydrogenase AVCG78_14785 PF01810 LysE type translocator AVCG78_14795 PF04055 Radical SAM superfamily AVCG78_14810 PF01329 Pterin 4 alpha carbinolamine dehydratase AVCG78_14815 PF02834 LigT like Phosphoesterase AVCG78_14820 PF13472 GDSL-like Lipase/Acylhydrolase family AVCG78_14825 PF00005 ABC transporter AVCG78_14835 PF01027 Inhibitor of apoptosis-promoting Bax1 AVCG78_14855 PF00694 Aconitase C-terminal domain AVCG78_14855 PF00330 Aconitase family (aconitate hydratase) AVCG78_14860 PF00005 ABC transporter AVCG78_14865 PF03379 CcmB protein AVCG78_14870 PF01578 Cytochrome C assembly protein AVCG78_14880 PF08534 Redoxin AVCG78_14885 PF10755 Protein of unknown function (DUF2585) AVCG78_14890 PF04279 Intracellular septation protein A AVCG78_14895 PF00448 SRP54-type protein, GTPase domain AVCG78_14895 PF02881 SRP54-type protein, helical bundle domain AVCG78_14900 PF00919 Uncharacterized protein family UPF0004 AVCG78_14900 PF04055 Radical SAM superfamily AVCG78_14905 PF01678 Diaminopimelate epimerase AVCG78_14910 PF12706 Beta-lactamase superfamily domain AVCG78_14920 PF02978 Signal peptide binding domain AVCG78_14920 PF02881 SRP54-type protein, helical bundle domain AVCG78_14920 PF00448 SRP54-type protein, GTPase domain AVCG78_14925 PF01817 Chorismate mutase type II AVCG78_14925 PF02153 Prephenate dehydrogenase AVCG78_14930 PF00886 Ribosomal protein S16 AVCG78_14935 PF01782 RimM N-terminal domain AVCG78_14935 PF05239 PRC-barrel domain AVCG78_14940 PF01746 tRNA (Guanine-1)-methyltransferase AVCG78_14950 PF01245 Ribosomal protein L19 AVCG78_14965 PF04234 CopC domain AVCG78_14970 PF04234 CopC domain AVCG78_14970 PF13115 YtkA-like AVCG78_14970 PF05425 Copper resistance protein D AVCG78_14975 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_14980 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_15000 PF00330 Aconitase family (aconitate hydratase) AVCG78_15005 PF00248 Aldo/keto reductase family AVCG78_15015 PF00072 Response regulator receiver domain AVCG78_15015 PF00486 Transcriptional regulatory protein, C terminal AVCG78_15035 PF03548 Outer membrane lipoprotein carrier protein LolA AVCG78_15040 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVCG78_15040 PF17854 FtsK alpha domain AVCG78_15040 PF09397 Ftsk gamma domain AVCG78_15040 PF01580 FtsK/SpoIIIE family AVCG78_15045 PF00909 Ammonium Transporter Family AVCG78_15050 PF00543 Nitrogen regulatory protein P-II AVCG78_15060 PF01494 FAD binding domain AVCG78_15065 PF03966 Trm112p-like protein AVCG78_15070 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_15070 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVCG78_15070 PF05362 Lon protease (S16) C-terminal proteolytic domain AVCG78_15075 PF00085 Thioredoxin AVCG78_15090 PF07690 Major Facilitator Superfamily AVCG78_15095 PF01263 Aldose 1-epimerase AVCG78_15110 PF04204 Homoserine O-succinyltransferase AVCG78_15115 PF01434 Peptidase family M41 AVCG78_15115 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_15115 PF17862 AAA+ lid domain AVCG78_15130 PF01165 Ribosomal protein S21 AVCG78_15140 PF16326 ABC transporter C-terminal domain AVCG78_15140 PF00005 ABC transporter AVCG78_15160 PF01547 Bacterial extracellular solute-binding protein AVCG78_15165 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_15170 PF00005 ABC transporter AVCG78_15175 PF01435 Peptidase family M48 AVCG78_15180 PF00140 Sigma-70 factor, region 1.2 AVCG78_15180 PF04542 Sigma-70 region 2 AVCG78_15180 PF04545 Sigma-70, region 4 AVCG78_15185 PF00183 Hsp90 protein AVCG78_15190 PF00210 Ferritin-like domain AVCG78_15200 PF02590 Predicted SPOUT methyltransferase AVCG78_15210 PF01467 Cytidylyltransferase-like AVCG78_15215 PF00171 Aldehyde dehydrogenase family AVCG78_15220 PF00696 Amino acid kinase family AVCG78_15220 PF01472 PUA domain AVCG78_15225 PF01018 GTP1/OBG AVCG78_15225 PF01926 50S ribosome-binding GTPase AVCG78_15245 PF01016 Ribosomal L27 protein AVCG78_15250 PF00829 Ribosomal prokaryotic L21 protein AVCG78_15260 PF05159 Capsule polysaccharide biosynthesis protein AVCG78_15265 PF05159 Capsule polysaccharide biosynthesis protein AVCG78_15270 PF02142 MGS-like domain AVCG78_15270 PF01808 AICARFT/IMPCHase bienzyme AVCG78_15280 PF01189 16S rRNA methyltransferase RsmB/F AVCG78_15280 PF01029 NusB family AVCG78_15285 PF01435 Peptidase family M48 AVCG78_15305 PF13180 PDZ domain AVCG78_15305 PF03572 Peptidase family S41 AVCG78_15315 PF00293 NUDIX domain AVCG78_15320 PF13614 AAA domain AVCG78_15345 PF01339 CheB methylesterase AVCG78_15345 PF00072 Response regulator receiver domain AVCG78_15350 PF01739 CheR methyltransferase, SAM binding domain AVCG78_15350 PF03705 CheR methyltransferase, all-alpha domain AVCG78_15355 PF01584 CheW-like domain AVCG78_15360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_15360 PF00672 HAMP domain AVCG78_15360 PF12729 Four helix bundle sensory module for signal transduction AVCG78_15365 PF17202 Single cache domain 3 AVCG78_15365 PF00672 HAMP domain AVCG78_15365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_15370 PF02203 Tar ligand binding domain homologue AVCG78_15370 PF00672 HAMP domain AVCG78_15370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_15375 PF01584 CheW-like domain AVCG78_15380 PF02895 Signal transducing histidine kinase, homodimeric domain AVCG78_15380 PF01627 Hpt domain AVCG78_15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_15380 PF07194 P2 response regulator binding domain AVCG78_15380 PF01584 CheW-like domain AVCG78_15385 PF00072 Response regulator receiver domain AVCG78_15395 PF00072 Response regulator receiver domain AVCG78_15400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_15400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVCG78_15405 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVCG78_15405 PF14850 DNA-binding domain of Proline dehydrogenase AVCG78_15405 PF01619 Proline dehydrogenase AVCG78_15405 PF00171 Aldehyde dehydrogenase family AVCG78_15410 PF01037 Lrp/AsnC ligand binding domain AVCG78_15420 PF01205 Uncharacterized protein family UPF0029 AVCG78_15425 PF00106 short chain dehydrogenase AVCG78_15430 PF00155 Aminotransferase class I and II AVCG78_15435 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_15435 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_15435 PF08659 KR domain AVCG78_15435 PF00550 Phosphopantetheine attachment site AVCG78_15435 PF14765 Polyketide synthase dehydratase AVCG78_15435 PF08990 Erythronolide synthase docking AVCG78_15435 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_15435 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_15435 PF00698 Acyl transferase domain AVCG78_15440 PF07690 Major Facilitator Superfamily AVCG78_15445 PF04551 GcpE protein AVCG78_15450 PF00691 OmpA family AVCG78_15450 PF13488 Glycine zipper AVCG78_15460 PF00348 Polyprenyl synthetase AVCG78_15465 PF00912 Transglycosylase AVCG78_15475 PF01783 Ribosomal L32p protein family AVCG78_15480 PF05233 PHB accumulation regulatory domain AVCG78_15480 PF07879 PHB/PHA accumulation regulator DNA-binding domain AVCG78_15485 PF02803 Thiolase, C-terminal domain AVCG78_15485 PF00108 Thiolase, N-terminal domain AVCG78_15510 PF01479 S4 domain AVCG78_15515 PF00037 4Fe-4S binding domain AVCG78_15515 PF11953 Domain of unknown function (DUF3470) AVCG78_15535 PF03328 HpcH/HpaI aldolase/citrate lyase family AVCG78_15545 PF00694 Aconitase C-terminal domain AVCG78_15550 PF00180 Isocitrate/isopropylmalate dehydrogenase AVCG78_15555 PF01569 PAP2 superfamily AVCG78_15560 PF08946 Osmosensory transporter coiled coil AVCG78_15560 PF00083 Sugar (and other) transporter AVCG78_15565 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVCG78_15565 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVCG78_15580 PF00484 Carbonic anhydrase AVCG78_15585 PF08543 Phosphomethylpyrimidine kinase AVCG78_15590 PF05088 Bacterial NAD-glutamate dehydrogenase AVCG78_15600 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AVCG78_15600 PF06165 Glycosyltransferase family 36 AVCG78_15600 PF10091 Putative glucoamylase AVCG78_15605 PF01546 Peptidase family M20/M25/M40 AVCG78_15605 PF07687 Peptidase dimerisation domain AVCG78_15610 PF00005 ABC transporter AVCG78_15610 PF00664 ABC transporter transmembrane region AVCG78_15620 PF00289 Biotin carboxylase, N-terminal domain AVCG78_15620 PF00364 Biotin-requiring enzyme AVCG78_15620 PF00682 HMGL-like AVCG78_15620 PF02436 Conserved carboxylase domain AVCG78_15620 PF02785 Biotin carboxylase C-terminal domain AVCG78_15620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_15630 PF16177 Acetyl-coenzyme A synthetase N-terminus AVCG78_15630 PF13193 AMP-binding enzyme C-terminal domain AVCG78_15630 PF00501 AMP-binding enzyme AVCG78_15640 PF01168 Alanine racemase, N-terminal domain AVCG78_15645 PF08264 Anticodon-binding domain of tRNA AVCG78_15645 PF00133 tRNA synthetases class I (I, L, M and V) AVCG78_15645 PF13603 Leucyl-tRNA synthetase, Domain 2 AVCG78_15660 PF17762 HTH domain found in ParB protein AVCG78_15660 PF02195 ParB-like nuclease domain AVCG78_15665 PF13614 AAA domain AVCG78_15670 PF02527 rRNA small subunit methyltransferase G AVCG78_15675 PF01134 Glucose inhibited division protein A AVCG78_15675 PF13932 GidA associated domain AVCG78_15680 PF01926 50S ribosome-binding GTPase AVCG78_15680 PF12631 MnmE helical domain AVCG78_15680 PF10396 GTP-binding protein TrmE N-terminus AVCG78_15685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVCG78_15685 PF07498 Rho termination factor, N-terminal domain AVCG78_15685 PF07497 Rho termination factor, RNA-binding domain AVCG78_15690 PF03653 Uncharacterised protein family (UPF0093) AVCG78_15695 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVCG78_15700 PF03618 Kinase/pyrophosphorylase AVCG78_15705 PF02545 Maf-like protein AVCG78_15710 PF01488 Shikimate / quinate 5-dehydrogenase AVCG78_15710 PF08501 Shikimate dehydrogenase substrate binding domain AVCG78_15710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVCG78_15715 PF01121 Dephospho-CoA kinase AVCG78_15720 PF00929 Exonuclease AVCG78_15725 PF02556 Preprotein translocase subunit SecB AVCG78_15730 PF04186 FxsA cytoplasmic membrane protein AVCG78_15740 PF03562 MltA specific insert domain AVCG78_15740 PF06725 3D domain AVCG78_15755 PF01751 Toprim domain AVCG78_15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_15755 PF00204 DNA gyrase B AVCG78_15755 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG78_15780 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVCG78_15785 PF00291 Pyridoxal-phosphate dependent enzyme AVCG78_15790 PF00290 Tryptophan synthase alpha chain AVCG78_15795 PF01039 Carboxyl transferase domain AVCG78_15800 PF02875 Mur ligase family, glutamate ligase domain AVCG78_15800 PF08245 Mur ligase middle domain AVCG78_15825 PF00085 Thioredoxin AVCG78_15835 PF07724 AAA domain (Cdc48 subfamily) AVCG78_15835 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_15835 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG78_15840 PF00227 Proteasome subunit AVCG78_15845 PF00475 Imidazoleglycerol-phosphate dehydratase AVCG78_15850 PF00117 Glutamine amidotransferase class-I AVCG78_15855 PF00977 Histidine biosynthesis protein AVCG78_15860 PF00977 Histidine biosynthesis protein AVCG78_15865 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVCG78_15870 PF00485 Phosphoribulokinase / Uridine kinase family AVCG78_15880 PF00472 RF-1 domain AVCG78_15885 PF01293 Phosphoenolpyruvate carboxykinase AVCG78_15890 PF00072 Response regulator receiver domain AVCG78_15890 PF00486 Transcriptional regulatory protein, C terminal AVCG78_15895 PF13755 Sensor N-terminal transmembrane domain AVCG78_15895 PF00672 HAMP domain AVCG78_15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_15895 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_15895 PF13756 Stimulus-sensing domain AVCG78_15905 PF03610 PTS system fructose IIA component AVCG78_15905 PF03830 PTS system sorbose subfamily IIB component AVCG78_15910 PF00381 PTS HPr component phosphorylation site AVCG78_15915 PF05221 S-adenosyl-L-homocysteine hydrolase AVCG78_15915 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVCG78_15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_15920 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_15925 PF01636 Phosphotransferase enzyme family AVCG78_15930 PF12804 MobA-like NTP transferase domain AVCG78_15935 PF12705 PD-(D/E)XK nuclease superfamily AVCG78_15940 PF00580 UvrD/REP helicase N-terminal domain AVCG78_15940 PF13361 UvrD-like helicase C-terminal domain AVCG78_15945 PF01274 Malate synthase AVCG78_15960 PF00072 Response regulator receiver domain AVCG78_15965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_15965 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_15970 PF00270 DEAD/DEAH box helicase AVCG78_15970 PF04408 Helicase associated domain (HA2) AVCG78_15970 PF00271 Helicase conserved C-terminal domain AVCG78_15970 PF08482 ATP-dependent helicase C-terminal AVCG78_15975 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVCG78_16020 PF07690 Major Facilitator Superfamily AVCG78_16025 PF00701 Dihydrodipicolinate synthetase family AVCG78_16030 PF00356 Bacterial regulatory proteins, lacI family AVCG78_16040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_16040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_16050 PF00294 pfkB family carbohydrate kinase AVCG78_16055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVCG78_16055 PF00205 Thiamine pyrophosphate enzyme, central domain AVCG78_16055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVCG78_16060 PF01261 Xylose isomerase-like TIM barrel AVCG78_16070 PF04962 KduI/IolB family AVCG78_16095 PF00106 short chain dehydrogenase AVCG78_16115 PF04545 Sigma-70, region 4 AVCG78_16115 PF04542 Sigma-70 region 2 AVCG78_16120 PF12973 ChrR Cupin-like domain AVCG78_16130 PF00455 DeoR C terminal sensor domain AVCG78_16130 PF08220 DeoR-like helix-turn-helix domain AVCG78_16135 PF01266 FAD dependent oxidoreductase AVCG78_16135 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVCG78_16140 PF00005 ABC transporter AVCG78_16140 PF08402 TOBE domain AVCG78_16145 PF00005 ABC transporter AVCG78_16150 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_16155 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_16170 PF00034 Cytochrome c AVCG78_16175 PF02348 Cytidylyltransferase AVCG78_16180 PF01817 Chorismate mutase type II AVCG78_16180 PF00800 Prephenate dehydratase AVCG78_16185 PF00933 Glycosyl hydrolase family 3 N terminal domain AVCG78_16190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AVCG78_16190 PF09297 NADH pyrophosphatase zinc ribbon domain AVCG78_16190 PF00293 NUDIX domain AVCG78_16205 PF12169 DNA polymerase III subunits gamma and tau domain III AVCG78_16205 PF12170 DNA polymerase III tau subunit V interacting with alpha AVCG78_16205 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AVCG78_16210 PF02575 YbaB/EbfC DNA-binding family AVCG78_16220 PF07411 Domain of unknown function (DUF1508) AVCG78_16235 PF12327 FtsZ family, C-terminal domain AVCG78_16235 PF00091 Tubulin/FtsZ family, GTPase domain AVCG78_16240 PF06421 GTP-binding protein LepA C-terminus AVCG78_16240 PF03144 Elongation factor Tu domain 2 AVCG78_16240 PF00009 Elongation factor Tu GTP binding domain AVCG78_16240 PF00679 Elongation factor G C-terminus AVCG78_16250 PF16347 Domain of unknown function (DUF4976) AVCG78_16250 PF00884 Sulfatase AVCG78_16255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVCG78_16255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVCG78_16255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVCG78_16255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVCG78_16260 PF03061 Thioesterase superfamily AVCG78_16275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVCG78_16285 PF03960 ArsC family AVCG78_16290 PF04073 Aminoacyl-tRNA editing domain AVCG78_16295 PF02073 Thermophilic metalloprotease (M29) AVCG78_16310 PF00313 'Cold-shock' DNA-binding domain AVCG78_16315 PF02601 Exonuclease VII, large subunit AVCG78_16315 PF13742 OB-fold nucleic acid binding domain AVCG78_16330 PF00535 Glycosyl transferase family 2 AVCG78_16340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_16340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_16345 PF00248 Aldo/keto reductase family AVCG78_16350 PF03466 LysR substrate binding domain AVCG78_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_16355 PF00248 Aldo/keto reductase family AVCG78_16370 PF02132 RecR protein AVCG78_16370 PF13662 Toprim domain AVCG78_16375 PF13406 Transglycosylase SLT domain AVCG78_16405 PF05977 Transmembrane secretion effector AVCG78_16415 PF17384 RimP C-terminal SH3 domain AVCG78_16415 PF02576 RimP N-terminal domain AVCG78_16420 PF00575 S1 RNA binding domain AVCG78_16420 PF08529 NusA N-terminal domain AVCG78_16420 PF13184 NusA-like KH domain AVCG78_16430 PF11987 Translation-initiation factor 2 AVCG78_16430 PF08364 Bacterial translation initiation factor IF-2 associated region AVCG78_16430 PF04760 Translation initiation factor IF-2, N-terminal region AVCG78_16430 PF00009 Elongation factor Tu GTP binding domain AVCG78_16435 PF02033 Ribosome-binding factor A AVCG78_16440 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVCG78_16440 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVCG78_16440 PF09157 Pseudouridine synthase II TruB, C-terminal AVCG78_16445 PF00312 Ribosomal protein S15 AVCG78_16450 PF00013 KH domain AVCG78_16450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVCG78_16450 PF01138 3' exoribonuclease family, domain 1 AVCG78_16450 PF03725 3' exoribonuclease family, domain 2 AVCG78_16450 PF00575 S1 RNA binding domain AVCG78_16455 PF05175 Methyltransferase small domain AVCG78_16455 PF08468 Methyltransferase small domain N-terminal AVCG78_16465 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_16465 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_16470 PF07977 FabA-like domain AVCG78_16475 PF01475 Ferric uptake regulator family AVCG78_16480 PF03458 UPF0126 domain AVCG78_16490 PF07690 Major Facilitator Superfamily AVCG78_16490 PF00083 Sugar (and other) transporter AVCG78_16505 PF02224 Cytidylate kinase AVCG78_16510 PF00575 S1 RNA binding domain AVCG78_16530 PF00707 Translation initiation factor IF-3, C-terminal domain AVCG78_16530 PF05198 Translation initiation factor IF-3, N-terminal domain AVCG78_16535 PF00072 Response regulator receiver domain AVCG78_16535 PF00486 Transcriptional regulatory protein, C terminal AVCG78_16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_16545 PF01632 Ribosomal protein L35 AVCG78_16550 PF00453 Ribosomal protein L20 AVCG78_16555 PF01409 tRNA synthetases class II core domain (F) AVCG78_16555 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVCG78_16565 PF03147 Ferredoxin-fold anticodon binding domain AVCG78_16565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVCG78_16565 PF03484 tRNA synthetase B5 domain AVCG78_16565 PF03483 B3/4 domain AVCG78_16565 PF01588 Putative tRNA binding domain AVCG78_16570 PF07886 BA14K-like protein AVCG78_16595 PF00437 Type II/IV secretion system protein AVCG78_16610 PF00263 Bacterial type II and III secretion system protein AVCG78_16610 PF13629 Pilus formation protein N terminal region AVCG78_16610 PF04972 BON domain AVCG78_16650 PF01676 Metalloenzyme superfamily AVCG78_16655 PF00962 Adenosine/AMP deaminase AVCG78_16670 PF01810 LysE type translocator AVCG78_16675 PF00300 Histidine phosphatase superfamily (branch 1) AVCG78_16680 PF01113 Dihydrodipicolinate reductase, N-terminus AVCG78_16680 PF05173 Dihydrodipicolinate reductase, C-terminus AVCG78_16685 PF00664 ABC transporter transmembrane region AVCG78_16685 PF00005 ABC transporter AVCG78_16690 PF02685 Glucokinase AVCG78_16695 PF02142 MGS-like domain AVCG78_16700 PF03411 Penicillin-insensitive murein endopeptidase AVCG78_16705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_16710 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_16715 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_16715 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_16720 PF00005 ABC transporter AVCG78_16720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_16725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_16735 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVCG78_16735 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVCG78_16765 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG78_16770 PF00005 ABC transporter AVCG78_16775 PF02653 Branched-chain amino acid transport system / permease component AVCG78_16780 PF02653 Branched-chain amino acid transport system / permease component AVCG78_16785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVCG78_16790 PF01048 Phosphorylase superfamily AVCG78_16795 PF01791 DeoC/LacD family aldolase AVCG78_16800 PF02885 Glycosyl transferase family, helical bundle domain AVCG78_16800 PF00591 Glycosyl transferase family, a/b domain AVCG78_16800 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AVCG78_16805 PF07702 UTRA domain AVCG78_16805 PF00392 Bacterial regulatory proteins, gntR family AVCG78_16810 PF06754 Phosphonate metabolism protein PhnG AVCG78_16815 PF05845 Bacterial phosphonate metabolism protein (PhnH) AVCG78_16820 PF05861 Bacterial phosphonate metabolism protein (PhnI) AVCG78_16825 PF06007 Phosphonate metabolism protein PhnJ AVCG78_16830 PF00005 ABC transporter AVCG78_16835 PF00005 ABC transporter AVCG78_16840 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_16845 PF00005 ABC transporter AVCG78_16855 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_16860 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_16865 PF06299 Protein of unknown function (DUF1045) AVCG78_16870 PF07969 Amidohydrolase family AVCG78_16875 PF00625 Guanylate kinase AVCG78_16885 PF02789 Cytosol aminopeptidase family, N-terminal domain AVCG78_16885 PF00883 Cytosol aminopeptidase family, catalytic domain AVCG78_16890 PF04264 YceI-like domain AVCG78_16895 PF04264 YceI-like domain AVCG78_16905 PF00877 NlpC/P60 family AVCG78_16915 PF01367 5'-3' exonuclease, C-terminal SAM fold AVCG78_16915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVCG78_16915 PF00476 DNA polymerase family A AVCG78_16915 PF01612 3'-5' exonuclease AVCG78_16925 PF07687 Peptidase dimerisation domain AVCG78_16925 PF01546 Peptidase family M20/M25/M40 AVCG78_16930 PF04073 Aminoacyl-tRNA editing domain AVCG78_16940 PF17092 Penicillin-binding protein OB-like domain AVCG78_16940 PF00912 Transglycosylase AVCG78_16940 PF00905 Penicillin binding protein transpeptidase domain AVCG78_16945 PF00012 Hsp70 protein AVCG78_16955 PF00226 DnaJ domain AVCG78_16955 PF01556 DnaJ C terminal domain AVCG78_16955 PF00684 DnaJ central domain AVCG78_16960 PF04102 SlyX AVCG78_16965 PF02463 RecF/RecN/SMC N terminal domain AVCG78_16970 PF00899 ThiF family AVCG78_16970 PF00581 Rhodanese-like domain AVCG78_16980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_16980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG78_16990 PF00294 pfkB family carbohydrate kinase AVCG78_16995 PF13188 PAS domain AVCG78_16995 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_16995 PF00563 EAL domain AVCG78_16995 PF03707 Bacterial signalling protein N terminal repeat AVCG78_17000 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AVCG78_17005 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG78_17005 PF00361 Proton-conducting membrane transporter AVCG78_17010 PF03466 LysR substrate binding domain AVCG78_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_17025 PF00440 Bacterial regulatory proteins, tetR family AVCG78_17030 PF00117 Glutamine amidotransferase class-I AVCG78_17030 PF00958 GMP synthase C terminal domain AVCG78_17030 PF02540 NAD synthase AVCG78_17045 PF03073 TspO/MBR family AVCG78_17070 PF01189 16S rRNA methyltransferase RsmB/F AVCG78_17070 PF01029 NusB family AVCG78_17075 PF03330 Lytic transglycolase AVCG78_17085 PF08331 Domain of unknown function (DUF1730) AVCG78_17090 PF00043 Glutathione S-transferase, C-terminal domain AVCG78_17090 PF13417 Glutathione S-transferase, N-terminal domain AVCG78_17095 PF02673 Bacitracin resistance protein BacA AVCG78_17115 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVCG78_17125 PF13649 Methyltransferase domain AVCG78_17130 PF00712 DNA polymerase III beta subunit, N-terminal domain AVCG78_17130 PF02768 DNA polymerase III beta subunit, C-terminal domain AVCG78_17130 PF02767 DNA polymerase III beta subunit, central domain AVCG78_17135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_17140 PF02021 Uncharacterised protein family UPF0102 AVCG78_17145 PF13416 Bacterial extracellular solute-binding protein AVCG78_17150 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17155 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17160 PF00005 ABC transporter AVCG78_17170 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVCG78_17170 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVCG78_17175 PF01078 Magnesium chelatase, subunit ChlI AVCG78_17175 PF13335 Magnesium chelatase, subunit ChlI C-terminal AVCG78_17180 PF00291 Pyridoxal-phosphate dependent enzyme AVCG78_17190 PF01810 LysE type translocator AVCG78_17195 PF00692 dUTPase AVCG78_17200 PF16658 Class II release factor RF3, C-terminal domain AVCG78_17200 PF03144 Elongation factor Tu domain 2 AVCG78_17200 PF00009 Elongation factor Tu GTP binding domain AVCG78_17205 PF00982 Glycosyltransferase family 20 AVCG78_17210 PF02358 Trehalose-phosphatase AVCG78_17215 PF08543 Phosphomethylpyrimidine kinase AVCG78_17230 PF05726 Pirin C-terminal cupin domain AVCG78_17230 PF02678 Pirin AVCG78_17240 PF03466 LysR substrate binding domain AVCG78_17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_17255 PF02441 Flavoprotein AVCG78_17255 PF04127 DNA / pantothenate metabolism flavoprotein AVCG78_17260 PF13581 Histidine kinase-like ATPase domain AVCG78_17260 PF07568 Histidine kinase AVCG78_17260 PF13426 PAS domain AVCG78_17265 PF00072 Response regulator receiver domain AVCG78_17270 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_17270 PF00072 Response regulator receiver domain AVCG78_17270 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_17270 PF01627 Hpt domain AVCG78_17275 PF03109 ABC1 family AVCG78_17280 PF01209 ubiE/COQ5 methyltransferase family AVCG78_17285 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVCG78_17285 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVCG78_17290 PF01649 Ribosomal protein S20 AVCG78_17295 PF13614 AAA domain AVCG78_17300 PF07506 RepB plasmid partitioning protein AVCG78_17300 PF02195 ParB-like nuclease domain AVCG78_17305 PF03428 Replication protein C N-terminal domain AVCG78_17305 PF11800 Replication protein C C-terminal region AVCG78_17310 PF13091 PLD-like domain AVCG78_17315 PF03706 Lysylphosphatidylglycerol synthase TM region AVCG78_17325 PF05899 Protein of unknown function (DUF861) AVCG78_17325 PF07883 Cupin domain AVCG78_17345 PF01037 Lrp/AsnC ligand binding domain AVCG78_17350 PF00005 ABC transporter AVCG78_17355 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_17360 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17365 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17370 PF02574 Homocysteine S-methyltransferase AVCG78_17375 PF01032 FecCD transport family AVCG78_17385 PF00005 ABC transporter AVCG78_17390 PF01546 Peptidase family M20/M25/M40 AVCG78_17400 PF00534 Glycosyl transferases group 1 AVCG78_17400 PF08323 Starch synthase catalytic domain AVCG78_17420 PF13593 SBF-like CPA transporter family (DUF4137) AVCG78_17425 PF00107 Zinc-binding dehydrogenase AVCG78_17425 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_17430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_17430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG78_17440 PF01202 Shikimate kinase AVCG78_17445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVCG78_17445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG78_17455 PF00356 Bacterial regulatory proteins, lacI family AVCG78_17465 PF02653 Branched-chain amino acid transport system / permease component AVCG78_17470 PF00005 ABC transporter AVCG78_17480 PF07756 Protein of unknown function (DUF1612) AVCG78_17480 PF11972 HTH DNA binding domain AVCG78_17485 PF13407 Periplasmic binding protein domain AVCG78_17490 PF00005 ABC transporter AVCG78_17495 PF02653 Branched-chain amino acid transport system / permease component AVCG78_17500 PF02653 Branched-chain amino acid transport system / permease component AVCG78_17505 PF07729 FCD domain AVCG78_17505 PF00392 Bacterial regulatory proteins, gntR family AVCG78_17510 PF00171 Aldehyde dehydrogenase family AVCG78_17515 PF00171 Aldehyde dehydrogenase family AVCG78_17525 PF03737 Aldolase/RraA AVCG78_17530 PF00920 Dehydratase family AVCG78_17535 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17540 PF00005 ABC transporter AVCG78_17550 PF07729 FCD domain AVCG78_17550 PF00392 Bacterial regulatory proteins, gntR family AVCG78_17555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_17560 PF00881 Nitroreductase family AVCG78_17575 PF00916 Sulfate permease family AVCG78_17575 PF01740 STAS domain AVCG78_17580 PF00582 Universal stress protein family AVCG78_17595 PF16859 Tetracyclin repressor-like, C-terminal domain AVCG78_17595 PF00440 Bacterial regulatory proteins, tetR family AVCG78_17600 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_17615 PF01613 Flavin reductase like domain AVCG78_17640 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG78_17655 PF00392 Bacterial regulatory proteins, gntR family AVCG78_17655 PF07729 FCD domain AVCG78_17660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_17665 PF00232 Glycosyl hydrolase family 1 AVCG78_17670 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17675 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_17675 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17680 PF01979 Amidohydrolase family AVCG78_17695 PF03841 L-seryl-tRNA selenium transferase AVCG78_17700 PF01590 GAF domain AVCG78_17700 PF00563 EAL domain AVCG78_17700 PF00360 Phytochrome region AVCG78_17700 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_17720 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_17720 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVCG78_17720 PF01799 [2Fe-2S] binding domain AVCG78_17725 PF00941 FAD binding domain in molybdopterin dehydrogenase AVCG78_17725 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVCG78_17730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG78_17730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG78_17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_17735 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_17735 PF00072 Response regulator receiver domain AVCG78_17735 PF01627 Hpt domain AVCG78_17740 PF03466 LysR substrate binding domain AVCG78_17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_17750 PF00561 alpha/beta hydrolase fold AVCG78_17755 PF00106 short chain dehydrogenase AVCG78_17765 PF03449 Transcription elongation factor, N-terminal AVCG78_17765 PF01272 Transcription elongation factor, GreA/GreB, C-term AVCG78_17770 PF11975 Family 4 glycosyl hydrolase C-terminal domain AVCG78_17770 PF02056 Family 4 glycosyl hydrolase AVCG78_17775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_17775 PF00005 ABC transporter AVCG78_17780 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_17780 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17785 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_17795 PF02056 Family 4 glycosyl hydrolase AVCG78_17795 PF11975 Family 4 glycosyl hydrolase C-terminal domain AVCG78_17800 PF01497 Periplasmic binding protein AVCG78_17800 PF12833 Helix-turn-helix domain AVCG78_17815 PF00486 Transcriptional regulatory protein, C terminal AVCG78_17815 PF00072 Response regulator receiver domain AVCG78_17820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_17825 PF00226 DnaJ domain AVCG78_17830 PF00107 Zinc-binding dehydrogenase AVCG78_17830 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_17835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVCG78_17835 PF13378 Enolase C-terminal domain-like AVCG78_17845 PF00248 Aldo/keto reductase family AVCG78_17855 PF02653 Branched-chain amino acid transport system / permease component AVCG78_17860 PF00005 ABC transporter AVCG78_17865 PF00392 Bacterial regulatory proteins, gntR family AVCG78_17865 PF07729 FCD domain AVCG78_17875 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17880 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_17885 PF00005 ABC transporter AVCG78_17885 PF17912 MalK OB fold domain AVCG78_17900 PF00356 Bacterial regulatory proteins, lacI family AVCG78_17905 PF00005 ABC transporter AVCG78_17905 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG78_17915 PF02653 Branched-chain amino acid transport system / permease component AVCG78_17925 PF00005 ABC transporter AVCG78_17930 PF00672 HAMP domain AVCG78_17930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_17935 PF00296 Luciferase-like monooxygenase AVCG78_17940 PF00296 Luciferase-like monooxygenase AVCG78_17945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_17945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_17950 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_17950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_17950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_17955 PF00248 Aldo/keto reductase family AVCG78_17970 PF02653 Branched-chain amino acid transport system / permease component AVCG78_17975 PF00005 ABC transporter AVCG78_17980 PF13407 Periplasmic binding protein domain AVCG78_17985 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG78_17995 PF00005 ABC transporter AVCG78_18000 PF02653 Branched-chain amino acid transport system / permease component AVCG78_18005 PF02653 Branched-chain amino acid transport system / permease component AVCG78_18010 PF00296 Luciferase-like monooxygenase AVCG78_18015 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_18020 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18025 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18030 PF00005 ABC transporter AVCG78_18035 PF03972 MmgE/PrpD family AVCG78_18040 PF00296 Luciferase-like monooxygenase AVCG78_18045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_18050 PF00296 Luciferase-like monooxygenase AVCG78_18055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18055 PF00005 ABC transporter AVCG78_18060 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_18060 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18065 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_18085 PF00072 Response regulator receiver domain AVCG78_18085 PF00196 Bacterial regulatory proteins, luxR family AVCG78_18090 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_18090 PF00672 HAMP domain AVCG78_18095 PF00141 Peroxidase AVCG78_18105 PF04074 YhcH/YjgK/YiaL AVCG78_18110 PF00701 Dihydrodipicolinate synthetase family AVCG78_18115 PF07690 Major Facilitator Superfamily AVCG78_18120 PF00356 Bacterial regulatory proteins, lacI family AVCG78_18125 PF00296 Luciferase-like monooxygenase AVCG78_18130 PF00296 Luciferase-like monooxygenase AVCG78_18135 PF07687 Peptidase dimerisation domain AVCG78_18135 PF01546 Peptidase family M20/M25/M40 AVCG78_18145 PF00005 ABC transporter AVCG78_18150 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_18160 PF00296 Luciferase-like monooxygenase AVCG78_18165 PF00672 HAMP domain AVCG78_18165 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_18170 PF00072 Response regulator receiver domain AVCG78_18170 PF00486 Transcriptional regulatory protein, C terminal AVCG78_18180 PF00873 AcrB/AcrD/AcrF family AVCG78_18190 PF14525 AraC-binding-like domain AVCG78_18195 PF00296 Luciferase-like monooxygenase AVCG78_18200 PF01613 Flavin reductase like domain AVCG78_18210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_18210 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_18210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_18220 PF16859 Tetracyclin repressor-like, C-terminal domain AVCG78_18220 PF00440 Bacterial regulatory proteins, tetR family AVCG78_18240 PF00171 Aldehyde dehydrogenase family AVCG78_18250 PF12833 Helix-turn-helix domain AVCG78_18255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG78_18255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG78_18260 PF00596 Class II Aldolase and Adducin N-terminal domain AVCG78_18265 PF00202 Aminotransferase class-III AVCG78_18280 PF13610 DDE domain AVCG78_18290 PF00106 short chain dehydrogenase AVCG78_18320 PF04542 Sigma-70 region 2 AVCG78_18320 PF08281 Sigma-70, region 4 AVCG78_18330 PF03831 PhnA domain AVCG78_18330 PF08274 PhnA Zinc-Ribbon AVCG78_18335 PF01011 PQQ enzyme repeat AVCG78_18340 PF01047 MarR family AVCG78_18340 PF00480 ROK family AVCG78_18350 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18355 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18360 PF17912 MalK OB fold domain AVCG78_18360 PF00005 ABC transporter AVCG78_18365 PF03009 Glycerophosphoryl diester phosphodiesterase family AVCG78_18395 PF18417 L-lysine epsilon oxidase C-terminal domain AVCG78_18395 PF17990 L-Lysine epsilon oxidase N-terminal AVCG78_18405 PF03334 Na+/H+ antiporter subunit AVCG78_18410 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AVCG78_18415 PF01899 Na+/H+ ion antiporter subunit AVCG78_18420 PF00361 Proton-conducting membrane transporter AVCG78_18425 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AVCG78_18430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AVCG78_18430 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AVCG78_18430 PF00361 Proton-conducting membrane transporter AVCG78_18430 PF13244 Domain of unknown function (DUF4040) AVCG78_18440 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG78_18445 PF01425 Amidase AVCG78_18450 PF00005 ABC transporter AVCG78_18455 PF02653 Branched-chain amino acid transport system / permease component AVCG78_18460 PF02653 Branched-chain amino acid transport system / permease component AVCG78_18465 PF07969 Amidohydrolase family AVCG78_18470 PF01979 Amidohydrolase family AVCG78_18480 PF02633 Creatinine amidohydrolase AVCG78_18485 PF13454 FAD-NAD(P)-binding AVCG78_18490 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18495 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18500 PF00005 ABC transporter AVCG78_18500 PF08402 TOBE domain AVCG78_18505 PF13416 Bacterial extracellular solute-binding protein AVCG78_18510 PF03466 LysR substrate binding domain AVCG78_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_18515 PF17874 MalT-like TPR region AVCG78_18515 PF00196 Bacterial regulatory proteins, luxR family AVCG78_18520 PF01425 Amidase AVCG78_18525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_18530 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18535 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_18535 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18540 PF00005 ABC transporter AVCG78_18540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18545 PF00005 ABC transporter AVCG78_18545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18550 PF00005 ABC transporter AVCG78_18560 PF01266 FAD dependent oxidoreductase AVCG78_18570 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18575 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_18575 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18585 PF00005 ABC transporter AVCG78_18595 PF02653 Branched-chain amino acid transport system / permease component AVCG78_18605 PF01047 MarR family AVCG78_18610 PF01613 Flavin reductase like domain AVCG78_18635 PF02798 Glutathione S-transferase, N-terminal domain AVCG78_18635 PF00043 Glutathione S-transferase, C-terminal domain AVCG78_18650 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG78_18655 PF07995 Glucose / Sorbosone dehydrogenase AVCG78_18665 PF00534 Glycosyl transferases group 1 AVCG78_18665 PF13439 Glycosyltransferase Family 4 AVCG78_18680 PF06628 Catalase-related immune-responsive AVCG78_18680 PF00199 Catalase AVCG78_18680 PF18011 C-terminal domain found in long catalases AVCG78_18685 PF01384 Phosphate transporter family AVCG78_18690 PF00005 ABC transporter AVCG78_18690 PF17912 MalK OB fold domain AVCG78_18695 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18700 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18705 PF13416 Bacterial extracellular solute-binding protein AVCG78_18710 PF00149 Calcineurin-like phosphoesterase AVCG78_18715 PF00171 Aldehyde dehydrogenase family AVCG78_18720 PF00480 ROK family AVCG78_18725 PF01791 DeoC/LacD family aldolase AVCG78_18730 PF04198 Putative sugar-binding domain AVCG78_18735 PF13407 Periplasmic binding protein domain AVCG78_18740 PF02653 Branched-chain amino acid transport system / permease component AVCG78_18745 PF00005 ABC transporter AVCG78_18760 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG78_18765 PF00392 Bacterial regulatory proteins, gntR family AVCG78_18770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_18775 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18780 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18780 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_18785 PF00005 ABC transporter AVCG78_18785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18790 PF00005 ABC transporter AVCG78_18790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18795 PF00557 Metallopeptidase family M24 AVCG78_18795 PF01321 Creatinase/Prolidase N-terminal domain AVCG78_18800 PF00392 Bacterial regulatory proteins, gntR family AVCG78_18800 PF07729 FCD domain AVCG78_18805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_18810 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18815 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18815 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_18825 PF00005 ABC transporter AVCG78_18825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18830 PF03738 Glutathionylspermidine synthase preATP-grasp AVCG78_18840 PF03994 Domain of Unknown Function (DUF350) AVCG78_18850 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AVCG78_18865 PF13193 AMP-binding enzyme C-terminal domain AVCG78_18865 PF00501 AMP-binding enzyme AVCG78_18875 PF00392 Bacterial regulatory proteins, gntR family AVCG78_18875 PF07729 FCD domain AVCG78_18880 PF00196 Bacterial regulatory proteins, luxR family AVCG78_18880 PF00072 Response regulator receiver domain AVCG78_18885 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18890 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_18890 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18895 PF00005 ABC transporter AVCG78_18895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_18915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_18920 PF00072 Response regulator receiver domain AVCG78_18920 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_18925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_18925 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_18925 PF00989 PAS fold AVCG78_18925 PF13188 PAS domain AVCG78_18925 PF13426 PAS domain AVCG78_18930 PF00072 Response regulator receiver domain AVCG78_18930 PF00196 Bacterial regulatory proteins, luxR family AVCG78_18935 PF05384 Sensor protein DegS AVCG78_18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_18935 PF07730 Histidine kinase AVCG78_18945 PF07690 Major Facilitator Superfamily AVCG78_18950 PF00005 ABC transporter AVCG78_18950 PF12857 TOBE-like domain AVCG78_18955 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18960 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18970 PF00356 Bacterial regulatory proteins, lacI family AVCG78_18975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_18975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_18985 PF01547 Bacterial extracellular solute-binding protein AVCG78_18990 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_18995 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19000 PF08402 TOBE domain AVCG78_19000 PF00005 ABC transporter AVCG78_19010 PF00005 ABC transporter AVCG78_19015 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_19025 PF03466 LysR substrate binding domain AVCG78_19030 PF07969 Amidohydrolase family AVCG78_19035 PF16353 Domain of unknown function(DUF4981) AVCG78_19035 PF00703 Glycosyl hydrolases family 2 AVCG78_19035 PF02837 Glycosyl hydrolases family 2, sugar binding domain AVCG78_19035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AVCG78_19035 PF02929 Beta galactosidase small chain AVCG78_19040 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG78_19040 PF00480 ROK family AVCG78_19045 PF01226 Formate/nitrite transporter AVCG78_19050 PF01979 Amidohydrolase family AVCG78_19060 PF02653 Branched-chain amino acid transport system / permease component AVCG78_19065 PF02653 Branched-chain amino acid transport system / permease component AVCG78_19070 PF00005 ABC transporter AVCG78_19085 PF00355 Rieske [2Fe-2S] domain AVCG78_19085 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_19095 PF13382 Adenine deaminase C-terminal domain AVCG78_19095 PF01979 Amidohydrolase family AVCG78_19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_19100 PF03466 LysR substrate binding domain AVCG78_19115 PF05199 GMC oxidoreductase AVCG78_19115 PF00732 GMC oxidoreductase AVCG78_19120 PF01979 Amidohydrolase family AVCG78_19130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVCG78_19130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVCG78_19135 PF01799 [2Fe-2S] binding domain AVCG78_19135 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_19140 PF00171 Aldehyde dehydrogenase family AVCG78_19145 PF01144 Coenzyme A transferase AVCG78_19150 PF01144 Coenzyme A transferase AVCG78_19155 PF07729 FCD domain AVCG78_19155 PF00392 Bacterial regulatory proteins, gntR family AVCG78_19160 PF01070 FMN-dependent dehydrogenase AVCG78_19170 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG78_19175 PF01494 FAD binding domain AVCG78_19180 PF13458 Periplasmic binding protein AVCG78_19195 PF00005 ABC transporter AVCG78_19195 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG78_19200 PF00005 ABC transporter AVCG78_19205 PF01261 Xylose isomerase-like TIM barrel AVCG78_19205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG78_19215 PF01220 Dehydroquinase class II AVCG78_19220 PF08501 Shikimate dehydrogenase substrate binding domain AVCG78_19220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVCG78_19225 PF00005 ABC transporter AVCG78_19230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_19235 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19240 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19250 PF11941 Domain of unknown function (DUF3459) AVCG78_19250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG78_19250 PF00128 Alpha amylase, catalytic domain AVCG78_19255 PF00128 Alpha amylase, catalytic domain AVCG78_19260 PF02566 OsmC-like protein AVCG78_19275 PF00005 ABC transporter AVCG78_19280 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19285 PF09084 NMT1/THI5 like AVCG78_19290 PF09084 NMT1/THI5 like AVCG78_19295 PF00296 Luciferase-like monooxygenase AVCG78_19300 PF02082 Transcriptional regulator AVCG78_19305 PF01613 Flavin reductase like domain AVCG78_19315 PF03466 LysR substrate binding domain AVCG78_19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_19325 PF13533 Biotin-lipoyl like AVCG78_19330 PF00873 AcrB/AcrD/AcrF family AVCG78_19335 PF03466 LysR substrate binding domain AVCG78_19335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_19360 PF01494 FAD binding domain AVCG78_19380 PF01370 NAD dependent epimerase/dehydratase family AVCG78_19390 PF00005 ABC transporter AVCG78_19400 PF13426 PAS domain AVCG78_19400 PF00989 PAS fold AVCG78_19400 PF08447 PAS fold AVCG78_19400 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_19400 PF13493 Domain of unknown function (DUF4118) AVCG78_19400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_19405 PF00196 Bacterial regulatory proteins, luxR family AVCG78_19405 PF00072 Response regulator receiver domain AVCG78_19415 PF00005 ABC transporter AVCG78_19415 PF17912 MalK OB fold domain AVCG78_19420 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19425 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19430 PF13416 Bacterial extracellular solute-binding protein AVCG78_19435 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19445 PF08402 TOBE domain AVCG78_19445 PF00005 ABC transporter AVCG78_19460 PF00480 ROK family AVCG78_19465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_19470 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19475 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_19475 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19480 PF00005 ABC transporter AVCG78_19480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_19485 PF00005 ABC transporter AVCG78_19485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_19490 PF00072 Response regulator receiver domain AVCG78_19490 PF00486 Transcriptional regulatory protein, C terminal AVCG78_19495 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_19495 PF07689 KaiB domain AVCG78_19495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_19505 PF00202 Aminotransferase class-III AVCG78_19515 PF00892 EamA-like transporter family AVCG78_19535 PF00892 EamA-like transporter family AVCG78_19550 PF00535 Glycosyl transferase family 2 AVCG78_19550 PF07238 PilZ domain AVCG78_19550 PF03552 Cellulose synthase AVCG78_19565 PF07536 HWE histidine kinase AVCG78_19565 PF13426 PAS domain AVCG78_19565 PF08447 PAS fold AVCG78_19570 PF07536 HWE histidine kinase AVCG78_19570 PF13426 PAS domain AVCG78_19575 PF00072 Response regulator receiver domain AVCG78_19585 PF03193 RsgA GTPase AVCG78_19590 PF00072 Response regulator receiver domain AVCG78_19590 PF13426 PAS domain AVCG78_19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_19595 PF16363 GDP-mannose 4,6 dehydratase AVCG78_19605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_19605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_19610 PF00005 ABC transporter AVCG78_19615 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_19625 PF00356 Bacterial regulatory proteins, lacI family AVCG78_19630 PF00672 HAMP domain AVCG78_19630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_19635 PF01584 CheW-like domain AVCG78_19640 PF13533 Biotin-lipoyl like AVCG78_19645 PF00873 AcrB/AcrD/AcrF family AVCG78_19650 PF00873 AcrB/AcrD/AcrF family AVCG78_19655 PF07729 FCD domain AVCG78_19655 PF00392 Bacterial regulatory proteins, gntR family AVCG78_19660 PF01571 Aminomethyltransferase folate-binding domain AVCG78_19665 PF00403 Heavy-metal-associated domain AVCG78_19665 PF00403 Heavy-metal-associated domain AVCG78_19670 PF13411 MerR HTH family regulatory protein AVCG78_19675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVCG78_19675 PF02806 Alpha amylase, C-terminal all-beta domain AVCG78_19675 PF00128 Alpha amylase, catalytic domain AVCG78_19680 PF00128 Alpha amylase, catalytic domain AVCG78_19680 PF16657 Maltogenic Amylase, C-terminal domain AVCG78_19685 PF00128 Alpha amylase, catalytic domain AVCG78_19685 PF11896 Domain of unknown function (DUF3416) AVCG78_19690 PF02446 4-alpha-glucanotransferase AVCG78_19695 PF00313 'Cold-shock' DNA-binding domain AVCG78_19700 PF01207 Dihydrouridine synthase (Dus) AVCG78_19710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_19710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_19720 PF07729 FCD domain AVCG78_19720 PF00392 Bacterial regulatory proteins, gntR family AVCG78_19725 PF00701 Dihydrodipicolinate synthetase family AVCG78_19735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_19735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_19745 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19750 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_19760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_19765 PF00005 ABC transporter AVCG78_19765 PF17912 MalK OB fold domain AVCG78_19770 PF17284 Spermidine synthase tetramerisation domain AVCG78_19785 PF13426 PAS domain AVCG78_19785 PF07536 HWE histidine kinase AVCG78_19785 PF08447 PAS fold AVCG78_19790 PF06745 KaiC AVCG78_19795 PF13581 Histidine kinase-like ATPase domain AVCG78_19795 PF07536 HWE histidine kinase AVCG78_19795 PF13426 PAS domain AVCG78_19810 PF05974 Domain of unknown function (DUF892) AVCG78_19815 PF04542 Sigma-70 region 2 AVCG78_19815 PF08281 Sigma-70, region 4 AVCG78_19840 PF00563 EAL domain AVCG78_19840 PF08447 PAS fold AVCG78_19840 PF08448 PAS fold AVCG78_19840 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_19850 PF00211 Adenylate and Guanylate cyclase catalytic domain AVCG78_19860 PF00664 ABC transporter transmembrane region AVCG78_19860 PF00005 ABC transporter AVCG78_19865 PF13302 Acetyltransferase (GNAT) domain AVCG78_19865 PF00027 Cyclic nucleotide-binding domain AVCG78_19870 PF00459 Inositol monophosphatase family AVCG78_19880 PF00005 ABC transporter AVCG78_19880 PF08402 TOBE domain AVCG78_19885 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19900 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_19900 PF00483 Nucleotidyl transferase AVCG78_19905 PF03786 D-mannonate dehydratase (UxuA) AVCG78_19930 PF14765 Polyketide synthase dehydratase AVCG78_19930 PF00550 Phosphopantetheine attachment site AVCG78_19930 PF08659 KR domain AVCG78_19930 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_19930 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_19930 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_19930 PF00698 Acyl transferase domain AVCG78_19930 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_19935 PF00698 Acyl transferase domain AVCG78_19935 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_19935 PF08659 KR domain AVCG78_19935 PF00550 Phosphopantetheine attachment site AVCG78_19935 PF14765 Polyketide synthase dehydratase AVCG78_19935 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_19935 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_19940 PF00698 Acyl transferase domain AVCG78_19940 PF03060 Nitronate monooxygenase AVCG78_19950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_19950 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_19950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_19960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_19960 PF00005 ABC transporter AVCG78_19965 PF00005 ABC transporter AVCG78_19965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_19970 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19975 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_19975 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_19980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_19985 PF00561 alpha/beta hydrolase fold AVCG78_20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_20000 PF03466 LysR substrate binding domain AVCG78_20005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_20010 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20015 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20015 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_20020 PF00005 ABC transporter AVCG78_20020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_20025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_20025 PF00005 ABC transporter AVCG78_20030 PF01425 Amidase AVCG78_20035 PF01425 Amidase AVCG78_20045 PF00857 Isochorismatase family AVCG78_20050 PF00005 ABC transporter AVCG78_20055 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) AVCG78_20060 PF00857 Isochorismatase family AVCG78_20065 PF00795 Carbon-nitrogen hydrolase AVCG78_20070 PF02653 Branched-chain amino acid transport system / permease component AVCG78_20080 PF02608 ABC transporter substrate-binding protein PnrA-like AVCG78_20085 PF00392 Bacterial regulatory proteins, gntR family AVCG78_20085 PF07729 FCD domain AVCG78_20090 PF00005 ABC transporter AVCG78_20090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_20095 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20095 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_20100 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_20115 PF00202 Aminotransferase class-III AVCG78_20130 PF01266 FAD dependent oxidoreductase AVCG78_20140 PF00171 Aldehyde dehydrogenase family AVCG78_20150 PF07687 Peptidase dimerisation domain AVCG78_20150 PF01546 Peptidase family M20/M25/M40 AVCG78_20155 PF00440 Bacterial regulatory proteins, tetR family AVCG78_20155 PF08361 MAATS-type transcriptional repressor, C-terminal region AVCG78_20160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVCG78_20165 PF00873 AcrB/AcrD/AcrF family AVCG78_20170 PF01039 Carboxyl transferase domain AVCG78_20185 PF18140 Propionyl-coenzyme A carboxylase BT domain AVCG78_20185 PF00364 Biotin-requiring enzyme AVCG78_20185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_20185 PF00289 Biotin carboxylase, N-terminal domain AVCG78_20185 PF02785 Biotin carboxylase C-terminal domain AVCG78_20200 PF01642 Methylmalonyl-CoA mutase AVCG78_20200 PF02310 B12 binding domain AVCG78_20205 PF01047 MarR family AVCG78_20220 PF13533 Biotin-lipoyl like AVCG78_20225 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG78_20235 PF00501 AMP-binding enzyme AVCG78_20235 PF00668 Condensation domain AVCG78_20235 PF00550 Phosphopantetheine attachment site AVCG78_20235 PF13193 AMP-binding enzyme C-terminal domain AVCG78_20235 PF00975 Thioesterase domain AVCG78_20240 PF01370 NAD dependent epimerase/dehydratase family AVCG78_20250 PF00005 ABC transporter AVCG78_20250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_20255 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_20255 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20260 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_20270 PF00701 Dihydrodipicolinate synthetase family AVCG78_20275 PF07729 FCD domain AVCG78_20275 PF00392 Bacterial regulatory proteins, gntR family AVCG78_20290 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AVCG78_20295 PF17912 MalK OB fold domain AVCG78_20295 PF00005 ABC transporter AVCG78_20295 PF03459 TOBE domain AVCG78_20300 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20305 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20310 PF01547 Bacterial extracellular solute-binding protein AVCG78_20315 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVCG78_20320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_20320 PF03466 LysR substrate binding domain AVCG78_20325 PF01266 FAD dependent oxidoreductase AVCG78_20330 PF00171 Aldehyde dehydrogenase family AVCG78_20335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVCG78_20335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG78_20345 PF08450 SMP-30/Gluconolactonase/LRE-like region AVCG78_20350 PF03033 Glycosyltransferase family 28 N-terminal domain AVCG78_20355 PF03472 Autoinducer binding domain AVCG78_20355 PF00196 Bacterial regulatory proteins, luxR family AVCG78_20360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVCG78_20360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG78_20365 PF01053 Cys/Met metabolism PLP-dependent enzyme AVCG78_20370 PF01554 MatE AVCG78_20380 PF00975 Thioesterase domain AVCG78_20380 PF13193 AMP-binding enzyme C-terminal domain AVCG78_20380 PF00501 AMP-binding enzyme AVCG78_20380 PF00550 Phosphopantetheine attachment site AVCG78_20380 PF00668 Condensation domain AVCG78_20385 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AVCG78_20415 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20420 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20425 PF16874 Glycosyl hydrolase family 36 C-terminal domain AVCG78_20425 PF16875 Glycosyl hydrolase family 36 N-terminal domain AVCG78_20430 PF00005 ABC transporter AVCG78_20430 PF17912 MalK OB fold domain AVCG78_20435 PF02449 Beta-galactosidase AVCG78_20435 PF08532 Beta-galactosidase trimerisation domain AVCG78_20435 PF08533 Beta-galactosidase C-terminal domain AVCG78_20445 PF17806 Sarcosine oxidase A3 domain AVCG78_20445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_20445 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVCG78_20445 PF01571 Aminomethyltransferase folate-binding domain AVCG78_20450 PF04267 Sarcosine oxidase, delta subunit family AVCG78_20455 PF01266 FAD dependent oxidoreductase AVCG78_20460 PF12833 Helix-turn-helix domain AVCG78_20460 PF01965 DJ-1/PfpI family AVCG78_20475 PF01493 GXGXG motif AVCG78_20480 PF01645 Conserved region in glutamate synthase AVCG78_20485 PF00120 Glutamine synthetase, catalytic domain AVCG78_20490 PF07690 Major Facilitator Superfamily AVCG78_20495 PF01070 FMN-dependent dehydrogenase AVCG78_20500 PF01547 Bacterial extracellular solute-binding protein AVCG78_20510 PF07470 Glycosyl Hydrolase Family 88 AVCG78_20520 PF17912 MalK OB fold domain AVCG78_20520 PF00005 ABC transporter AVCG78_20525 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20530 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20535 PF00356 Bacterial regulatory proteins, lacI family AVCG78_20545 PF00107 Zinc-binding dehydrogenase AVCG78_20545 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_20550 PF01738 Dienelactone hydrolase family AVCG78_20555 PF00571 CBS domain AVCG78_20555 PF00478 IMP dehydrogenase / GMP reductase domain AVCG78_20560 PF03466 LysR substrate binding domain AVCG78_20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_20570 PF03466 LysR substrate binding domain AVCG78_20590 PF04452 RNA methyltransferase AVCG78_20595 PF01384 Phosphate transporter family AVCG78_20610 PF01565 FAD binding domain AVCG78_20610 PF02913 FAD linked oxidases, C-terminal domain AVCG78_20615 PF01565 FAD binding domain AVCG78_20625 PF13183 4Fe-4S dicluster domain AVCG78_20625 PF02754 Cysteine-rich domain AVCG78_20635 PF00043 Glutathione S-transferase, C-terminal domain AVCG78_20635 PF02798 Glutathione S-transferase, N-terminal domain AVCG78_20645 PF01634 ATP phosphoribosyltransferase AVCG78_20650 PF13393 Histidyl-tRNA synthetase AVCG78_20665 PF13393 Histidyl-tRNA synthetase AVCG78_20665 PF03129 Anticodon binding domain AVCG78_20695 PF03352 Methyladenine glycosylase AVCG78_20700 PF01476 LysM domain AVCG78_20700 PF17969 L,D-transpeptidase C-terminal domain AVCG78_20700 PF03734 L,D-transpeptidase catalytic domain AVCG78_20705 PF17969 L,D-transpeptidase C-terminal domain AVCG78_20705 PF03734 L,D-transpeptidase catalytic domain AVCG78_20705 PF01476 LysM domain AVCG78_20710 PF17874 MalT-like TPR region AVCG78_20710 PF00196 Bacterial regulatory proteins, luxR family AVCG78_20715 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AVCG78_20715 PF01648 4'-phosphopantetheinyl transferase superfamily AVCG78_20720 PF02631 RecX family AVCG78_20725 PF16884 N-terminal domain of oxidoreductase AVCG78_20725 PF00107 Zinc-binding dehydrogenase AVCG78_20740 PF08264 Anticodon-binding domain of tRNA AVCG78_20740 PF00133 tRNA synthetases class I (I, L, M and V) AVCG78_20745 PF00474 Sodium:solute symporter family AVCG78_20760 PF00701 Dihydrodipicolinate synthetase family AVCG78_20775 PF01687 Riboflavin kinase AVCG78_20775 PF06574 FAD synthetase AVCG78_20785 PF02417 Chromate transporter AVCG78_20790 PF00166 Chaperonin 10 Kd subunit AVCG78_20795 PF00118 TCP-1/cpn60 chaperonin family AVCG78_20810 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG78_20810 PF01968 Hydantoinase/oxoprolinase AVCG78_20815 PF00005 ABC transporter AVCG78_20815 PF08402 TOBE domain AVCG78_20825 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20830 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20835 PF02219 Methylenetetrahydrofolate reductase AVCG78_20840 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVCG78_20845 PF16653 Saccharopine dehydrogenase C-terminal domain AVCG78_20845 PF03435 Saccharopine dehydrogenase NADP binding domain AVCG78_20850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_20850 PF02785 Biotin carboxylase C-terminal domain AVCG78_20850 PF00364 Biotin-requiring enzyme AVCG78_20850 PF00289 Biotin carboxylase, N-terminal domain AVCG78_20855 PF02682 Carboxyltransferase domain, subdomain C and D AVCG78_20860 PF07286 Protein of unknown function (DUF1445) AVCG78_20865 PF03746 LamB/YcsF family AVCG78_20870 PF01566 Natural resistance-associated macrophage protein AVCG78_20875 PF07729 FCD domain AVCG78_20875 PF00392 Bacterial regulatory proteins, gntR family AVCG78_20880 PF01037 Lrp/AsnC ligand binding domain AVCG78_20885 PF00291 Pyridoxal-phosphate dependent enzyme AVCG78_20900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_20905 PF00171 Aldehyde dehydrogenase family AVCG78_20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_20910 PF03466 LysR substrate binding domain AVCG78_20915 PF03746 LamB/YcsF family AVCG78_20920 PF00364 Biotin-requiring enzyme AVCG78_20925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_20925 PF00289 Biotin carboxylase, N-terminal domain AVCG78_20925 PF02785 Biotin carboxylase C-terminal domain AVCG78_20935 PF02626 Carboxyltransferase domain, subdomain A and B AVCG78_20945 PF08402 TOBE domain AVCG78_20945 PF00005 ABC transporter AVCG78_20950 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_20975 PF00005 ABC transporter AVCG78_20975 PF08402 TOBE domain AVCG78_20980 PF01522 Polysaccharide deacetylase AVCG78_20990 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVCG78_20990 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVCG78_21000 PF01425 Amidase AVCG78_21005 PF01037 Lrp/AsnC ligand binding domain AVCG78_21010 PF01266 FAD dependent oxidoreductase AVCG78_21015 PF01740 STAS domain AVCG78_21015 PF00916 Sulfate permease family AVCG78_21020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVCG78_21020 PF10414 Sirohaem synthase dimerisation region AVCG78_21020 PF14824 Sirohaem biosynthesis protein central AVCG78_21025 PF04324 BFD-like [2Fe-2S] binding domain AVCG78_21025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG78_21025 PF00384 Molybdopterin oxidoreductase AVCG78_21025 PF01568 Molydopterin dinucleotide binding domain AVCG78_21035 PF18267 Rubredoxin NAD+ reductase C-terminal domain AVCG78_21035 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_21035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVCG78_21035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVCG78_21035 PF04324 BFD-like [2Fe-2S] binding domain AVCG78_21040 PF00005 ABC transporter AVCG78_21045 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21060 PF03861 ANTAR domain AVCG78_21060 PF08376 Nitrate and nitrite sensing AVCG78_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_21080 PF03466 LysR substrate binding domain AVCG78_21085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_21085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_21085 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_21090 PF02515 CoA-transferase family III AVCG78_21100 PF03576 Peptidase family S58 AVCG78_21105 PF01063 Amino-transferase class IV AVCG78_21110 PF00144 Beta-lactamase AVCG78_21115 PF01244 Membrane dipeptidase (Peptidase family M19) AVCG78_21120 PF13667 ThiC-associated domain AVCG78_21120 PF01964 Radical SAM ThiC family AVCG78_21125 PF01266 FAD dependent oxidoreductase AVCG78_21135 PF05690 Thiazole biosynthesis protein ThiG AVCG78_21140 PF02581 Thiamine monophosphate synthase AVCG78_21180 PF02563 Polysaccharide biosynthesis/export protein AVCG78_21185 PF00069 Protein kinase domain AVCG78_21195 PF06761 Intracellular multiplication and human macrophage-killing AVCG78_21195 PF14331 ImcF-related N-terminal domain AVCG78_21195 PF06744 Type VI secretion protein IcmF C-terminal AVCG78_21200 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVCG78_21200 PF00691 OmpA family AVCG78_21205 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AVCG78_21220 PF05947 Type VI secretion system, TssF AVCG78_21240 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AVCG78_21245 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AVCG78_21255 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_21255 PF07724 AAA domain (Cdc48 subfamily) AVCG78_21255 PF17871 AAA lid domain AVCG78_21255 PF10431 C-terminal, D2-small domain, of ClpB protein AVCG78_21275 PF02355 Protein export membrane protein AVCG78_21275 PF07549 SecD/SecF GG Motif AVCG78_21285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_21285 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_21290 PF00296 Luciferase-like monooxygenase AVCG78_21300 PF01758 Sodium Bile acid symporter family AVCG78_21305 PF03960 ArsC family AVCG78_21310 PF03358 NADPH-dependent FMN reductase AVCG78_21320 PF00072 Response regulator receiver domain AVCG78_21320 PF00486 Transcriptional regulatory protein, C terminal AVCG78_21325 PF13493 Domain of unknown function (DUF4118) AVCG78_21325 PF13492 GAF domain AVCG78_21325 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_21325 PF02702 Osmosensitive K+ channel His kinase sensor domain AVCG78_21325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_21330 PF02669 K+-transporting ATPase, c chain AVCG78_21340 PF03814 Potassium-transporting ATPase A subunit AVCG78_21355 PF00271 Helicase conserved C-terminal domain AVCG78_21355 PF00270 DEAD/DEAH box helicase AVCG78_21355 PF16124 RecQ zinc-binding AVCG78_21355 PF09382 RQC domain AVCG78_21355 PF00570 HRDC domain AVCG78_21360 PF01494 FAD binding domain AVCG78_21365 PF01266 FAD dependent oxidoreductase AVCG78_21370 PF00842 Alanine racemase, C-terminal domain AVCG78_21370 PF01168 Alanine racemase, N-terminal domain AVCG78_21375 PF01037 Lrp/AsnC ligand binding domain AVCG78_21380 PF07729 FCD domain AVCG78_21380 PF00392 Bacterial regulatory proteins, gntR family AVCG78_21390 PF12697 Alpha/beta hydrolase family AVCG78_21395 PF01613 Flavin reductase like domain AVCG78_21400 PF00296 Luciferase-like monooxygenase AVCG78_21405 PF00171 Aldehyde dehydrogenase family AVCG78_21415 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21420 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21425 PF00005 ABC transporter AVCG78_21425 PF08402 TOBE domain AVCG78_21430 PF00171 Aldehyde dehydrogenase family AVCG78_21440 PF05025 RbsD / FucU transport protein family AVCG78_21445 PF00248 Aldo/keto reductase family AVCG78_21450 PF02653 Branched-chain amino acid transport system / permease component AVCG78_21455 PF02653 Branched-chain amino acid transport system / permease component AVCG78_21460 PF00005 ABC transporter AVCG78_21465 PF13407 Periplasmic binding protein domain AVCG78_21470 PF00465 Iron-containing alcohol dehydrogenase AVCG78_21475 PF00392 Bacterial regulatory proteins, gntR family AVCG78_21475 PF07729 FCD domain AVCG78_21480 PF08666 SAF domain AVCG78_21480 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AVCG78_21495 PF00465 Iron-containing alcohol dehydrogenase AVCG78_21500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_21500 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_21505 PF00072 Response regulator receiver domain AVCG78_21505 PF00486 Transcriptional regulatory protein, C terminal AVCG78_21515 PF03401 Tripartite tricarboxylate transporter family receptor AVCG78_21525 PF01970 Tripartite tricarboxylate transporter TctA family AVCG78_21540 PF00108 Thiolase, N-terminal domain AVCG78_21540 PF02803 Thiolase, C-terminal domain AVCG78_21545 PF01144 Coenzyme A transferase AVCG78_21550 PF01144 Coenzyme A transferase AVCG78_21555 PF09339 IclR helix-turn-helix domain AVCG78_21555 PF01614 Bacterial transcriptional regulator AVCG78_21565 PF01494 FAD binding domain AVCG78_21570 PF03466 LysR substrate binding domain AVCG78_21570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_21575 PF00561 alpha/beta hydrolase fold AVCG78_21580 PF02627 Carboxymuconolactone decarboxylase family AVCG78_21585 PF00775 Dioxygenase AVCG78_21585 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AVCG78_21590 PF00775 Dioxygenase AVCG78_21595 PF10397 Adenylosuccinate lyase C-terminus AVCG78_21595 PF00206 Lyase AVCG78_21600 PF00107 Zinc-binding dehydrogenase AVCG78_21605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVCG78_21605 PF17854 FtsK alpha domain AVCG78_21605 PF09397 Ftsk gamma domain AVCG78_21605 PF01580 FtsK/SpoIIIE family AVCG78_21610 PF00005 ABC transporter AVCG78_21610 PF08402 TOBE domain AVCG78_21615 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21625 PF00924 Mechanosensitive ion channel AVCG78_21630 PF07886 BA14K-like protein AVCG78_21640 PF00664 ABC transporter transmembrane region AVCG78_21640 PF00005 ABC transporter AVCG78_21645 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_21645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_21645 PF00672 HAMP domain AVCG78_21645 PF16527 Two-component sensor protein CpxA, periplasmic domain AVCG78_21650 PF00072 Response regulator receiver domain AVCG78_21650 PF00486 Transcriptional regulatory protein, C terminal AVCG78_21665 PF02104 SURF1 family AVCG78_21670 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVCG78_21675 PF00510 Cytochrome c oxidase subunit III AVCG78_21680 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVCG78_21685 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVCG78_21685 PF06481 COX Aromatic Rich Motif AVCG78_21690 PF04542 Sigma-70 region 2 AVCG78_21690 PF08281 Sigma-70, region 4 AVCG78_21700 PF01027 Inhibitor of apoptosis-promoting Bax1 AVCG78_21705 PF00127 Copper binding proteins, plastocyanin/azurin family AVCG78_21715 PF00722 Glycosyl hydrolases family 16 AVCG78_21715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AVCG78_21720 PF00375 Sodium:dicarboxylate symporter family AVCG78_21725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_21725 PF02743 Cache domain AVCG78_21725 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_21730 PF00072 Response regulator receiver domain AVCG78_21730 PF00158 Sigma-54 interaction domain AVCG78_21730 PF02954 Bacterial regulatory protein, Fis family AVCG78_21735 PF17938 Tetracyclin repressor-like, C-terminal domain AVCG78_21735 PF00440 Bacterial regulatory proteins, tetR family AVCG78_21750 PF00480 ROK family AVCG78_21755 PF01979 Amidohydrolase family AVCG78_21760 PF01380 SIS domain AVCG78_21765 PF00392 Bacterial regulatory proteins, gntR family AVCG78_21765 PF07702 UTRA domain AVCG78_21775 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21780 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21785 PF01547 Bacterial extracellular solute-binding protein AVCG78_21790 PF00005 ABC transporter AVCG78_21790 PF03459 TOBE domain AVCG78_21790 PF17912 MalK OB fold domain AVCG78_21795 PF14031 Putative serine dehydratase domain AVCG78_21795 PF01168 Alanine racemase, N-terminal domain AVCG78_21800 PF07364 Metallopeptidase family M81 AVCG78_21800 PF07171 MlrC C-terminus AVCG78_21815 PF01418 Helix-turn-helix domain, rpiR family AVCG78_21815 PF02685 Glucokinase AVCG78_21815 PF01380 SIS domain AVCG78_21825 PF00728 Glycosyl hydrolase family 20, catalytic domain AVCG78_21825 PF02838 Glycosyl hydrolase family 20, domain 2 AVCG78_21835 PF07690 Major Facilitator Superfamily AVCG78_21840 PF03932 CutC family AVCG78_21845 PF03061 Thioesterase superfamily AVCG78_21850 PF00440 Bacterial regulatory proteins, tetR family AVCG78_21855 PF07691 PA14 domain AVCG78_21855 PF14310 Fibronectin type III-like domain AVCG78_21855 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVCG78_21855 PF00933 Glycosyl hydrolase family 3 N terminal domain AVCG78_21860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_21860 PF08521 Two-component sensor kinase N-terminal AVCG78_21860 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_21865 PF00072 Response regulator receiver domain AVCG78_21865 PF00486 Transcriptional regulatory protein, C terminal AVCG78_21880 PF01261 Xylose isomerase-like TIM barrel AVCG78_21885 PF00596 Class II Aldolase and Adducin N-terminal domain AVCG78_21890 PF00455 DeoR C terminal sensor domain AVCG78_21890 PF08220 DeoR-like helix-turn-helix domain AVCG78_21895 PF13407 Periplasmic binding protein domain AVCG78_21900 PF00005 ABC transporter AVCG78_21905 PF02653 Branched-chain amino acid transport system / permease component AVCG78_21910 PF02653 Branched-chain amino acid transport system / permease component AVCG78_21915 PF05336 L-rhamnose mutarotase AVCG78_21925 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG78_21930 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_21930 PF00563 EAL domain AVCG78_21930 PF03707 Bacterial signalling protein N terminal repeat AVCG78_21935 PF01177 Asp/Glu/Hydantoin racemase AVCG78_21940 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21945 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_21955 PF00005 ABC transporter AVCG78_21955 PF08402 TOBE domain AVCG78_21975 PF02245 Methylpurine-DNA glycosylase (MPG) AVCG78_21980 PF00005 ABC transporter AVCG78_21985 PF02687 FtsX-like permease family AVCG78_21985 PF12704 MacB-like periplasmic core domain AVCG78_21995 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AVCG78_22000 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AVCG78_22005 PF13614 AAA domain AVCG78_22010 PF02195 ParB-like nuclease domain AVCG78_22010 PF07506 RepB plasmid partitioning protein AVCG78_22015 PF03428 Replication protein C N-terminal domain AVCG78_22015 PF11800 Replication protein C C-terminal region AVCG78_22025 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_22025 PF17158 Membrane-associated sensor, integral membrane domain AVCG78_22030 PF00589 Phage integrase family AVCG78_22050 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_22050 PF00107 Zinc-binding dehydrogenase AVCG78_22055 PF03737 Aldolase/RraA AVCG78_22060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG78_22060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_22070 PF03401 Tripartite tricarboxylate transporter family receptor AVCG78_22080 PF01970 Tripartite tricarboxylate transporter TctA family AVCG78_22085 PF01070 FMN-dependent dehydrogenase AVCG78_22100 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_22100 PF00107 Zinc-binding dehydrogenase AVCG78_22105 PF00171 Aldehyde dehydrogenase family AVCG78_22110 PF12146 Serine aminopeptidase, S33 AVCG78_22115 PF07690 Major Facilitator Superfamily AVCG78_22120 PF00106 short chain dehydrogenase AVCG78_22125 PF00970 Oxidoreductase FAD-binding domain AVCG78_22125 PF00111 2Fe-2S iron-sulfur cluster binding domain AVCG78_22125 PF00175 Oxidoreductase NAD-binding domain AVCG78_22130 PF00866 Ring hydroxylating beta subunit AVCG78_22135 PF00355 Rieske [2Fe-2S] domain AVCG78_22135 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVCG78_22140 PF04444 Catechol dioxygenase N terminus AVCG78_22140 PF00775 Dioxygenase AVCG78_22145 PF02426 Muconolactone delta-isomerase AVCG78_22150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVCG78_22150 PF13378 Enolase C-terminal domain-like AVCG78_22155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_22155 PF03466 LysR substrate binding domain AVCG78_22160 PF13358 DDE superfamily endonuclease AVCG78_22170 PF00296 Luciferase-like monooxygenase AVCG78_22200 PF01850 PIN domain AVCG78_22210 PF07756 Protein of unknown function (DUF1612) AVCG78_22210 PF11972 HTH DNA binding domain AVCG78_22245 PF02805 Metal binding domain of Ada AVCG78_22245 PF00730 HhH-GPD superfamily base excision DNA repair protein AVCG78_22245 PF12833 Helix-turn-helix domain AVCG78_22245 PF06029 AlkA N-terminal domain AVCG78_22250 PF05544 Proline racemase AVCG78_22255 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22260 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22265 PF00005 ABC transporter AVCG78_22265 PF00571 CBS domain AVCG78_22275 PF01266 FAD dependent oxidoreductase AVCG78_22280 PF00171 Aldehyde dehydrogenase family AVCG78_22285 PF00701 Dihydrodipicolinate synthetase family AVCG78_22290 PF00392 Bacterial regulatory proteins, gntR family AVCG78_22290 PF07729 FCD domain AVCG78_22295 PF07729 FCD domain AVCG78_22295 PF00392 Bacterial regulatory proteins, gntR family AVCG78_22305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_22305 PF03466 LysR substrate binding domain AVCG78_22315 PF00285 Citrate synthase, C-terminal domain AVCG78_22330 PF01970 Tripartite tricarboxylate transporter TctA family AVCG78_22350 PF02515 CoA-transferase family III AVCG78_22365 PF00392 Bacterial regulatory proteins, gntR family AVCG78_22365 PF07729 FCD domain AVCG78_22375 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVCG78_22385 PF00892 EamA-like transporter family AVCG78_22390 PF00501 AMP-binding enzyme AVCG78_22390 PF13193 AMP-binding enzyme C-terminal domain AVCG78_22390 PF00550 Phosphopantetheine attachment site AVCG78_22390 PF00668 Condensation domain AVCG78_22395 PF01361 Tautomerase enzyme AVCG78_22400 PF04227 Indigoidine synthase A like protein AVCG78_22405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVCG78_22425 PF03466 LysR substrate binding domain AVCG78_22425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_22475 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_22475 PF00672 HAMP domain AVCG78_22475 PF16527 Two-component sensor protein CpxA, periplasmic domain AVCG78_22475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_22480 PF00072 Response regulator receiver domain AVCG78_22480 PF00486 Transcriptional regulatory protein, C terminal AVCG78_22485 PF02321 Outer membrane efflux protein AVCG78_22490 PF13533 Biotin-lipoyl like AVCG78_22495 PF00873 AcrB/AcrD/AcrF family AVCG78_22500 PF07687 Peptidase dimerisation domain AVCG78_22500 PF01546 Peptidase family M20/M25/M40 AVCG78_22510 PF00294 pfkB family carbohydrate kinase AVCG78_22520 PF02126 Phosphotriesterase family AVCG78_22525 PF02653 Branched-chain amino acid transport system / permease component AVCG78_22530 PF00005 ABC transporter AVCG78_22540 PF00356 Bacterial regulatory proteins, lacI family AVCG78_22555 PF01026 TatD related DNase AVCG78_22560 PF02653 Branched-chain amino acid transport system / permease component AVCG78_22565 PF02653 Branched-chain amino acid transport system / permease component AVCG78_22570 PF00005 ABC transporter AVCG78_22580 PF14031 Putative serine dehydratase domain AVCG78_22585 PF01979 Amidohydrolase family AVCG78_22585 PF13382 Adenine deaminase C-terminal domain AVCG78_22595 PF00795 Carbon-nitrogen hydrolase AVCG78_22600 PF08402 TOBE domain AVCG78_22600 PF00005 ABC transporter AVCG78_22605 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22610 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22630 PF13005 zinc-finger binding domain of transposase IS66 AVCG78_22630 PF03050 Transposase IS66 family AVCG78_22630 PF13817 IS66 C-terminal element AVCG78_22630 PF13007 Transposase C of IS166 homeodomain AVCG78_22645 PF00067 Cytochrome P450 AVCG78_22650 PF13649 Methyltransferase domain AVCG78_22660 PF00685 Sulfotransferase domain AVCG78_22675 PF02223 Thymidylate kinase AVCG78_22680 PF00156 Phosphoribosyl transferase domain AVCG78_22695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_22700 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22705 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_22705 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_22710 PF00005 ABC transporter AVCG78_22715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_22715 PF00005 ABC transporter AVCG78_22720 PF00155 Aminotransferase class I and II AVCG78_22725 PF03466 LysR substrate binding domain AVCG78_22725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_22730 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVCG78_22735 PF02441 Flavoprotein AVCG78_22740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_22750 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22755 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_22755 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_22760 PF00005 ABC transporter AVCG78_22760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_22765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_22765 PF00005 ABC transporter AVCG78_22775 PF01979 Amidohydrolase family AVCG78_22780 PF01546 Peptidase family M20/M25/M40 AVCG78_22785 PF00221 Aromatic amino acid lyase AVCG78_22800 PF05762 VWA domain containing CoxE-like protein AVCG78_22815 PF07728 AAA domain (dynein-related subfamily) AVCG78_22820 PF00709 Adenylosuccinate synthetase AVCG78_22850 PF04717 Type VI secretion system, phage-baseplate injector AVCG78_22895 PF00665 Integrase core domain AVCG78_22895 PF13936 Helix-turn-helix domain AVCG78_22910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVCG78_22910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVCG78_22915 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVCG78_22915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVCG78_22920 PF09137 Glucodextranase, domain N AVCG78_22920 PF00723 Glycosyl hydrolases family 15 AVCG78_22925 PF00155 Aminotransferase class I and II AVCG78_22925 PF00392 Bacterial regulatory proteins, gntR family AVCG78_22935 PF00795 Carbon-nitrogen hydrolase AVCG78_22950 PF02769 AIR synthase related protein, C-terminal domain AVCG78_22950 PF00586 AIR synthase related protein, N-terminal domain AVCG78_22955 PF00534 Glycosyl transferases group 1 AVCG78_22955 PF13439 Glycosyltransferase Family 4 AVCG78_22980 PF00384 Molybdopterin oxidoreductase AVCG78_23005 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23015 PF00005 ABC transporter AVCG78_23015 PF08402 TOBE domain AVCG78_23020 PF00440 Bacterial regulatory proteins, tetR family AVCG78_23020 PF17938 Tetracyclin repressor-like, C-terminal domain AVCG78_23025 PF00561 alpha/beta hydrolase fold AVCG78_23030 PF01613 Flavin reductase like domain AVCG78_23040 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23045 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23050 PF13416 Bacterial extracellular solute-binding protein AVCG78_23055 PF08402 TOBE domain AVCG78_23055 PF00005 ABC transporter AVCG78_23065 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23075 PF00392 Bacterial regulatory proteins, gntR family AVCG78_23075 PF07729 FCD domain AVCG78_23085 PF08753 NikR C terminal nickel binding domain AVCG78_23085 PF01402 Ribbon-helix-helix protein, copG family AVCG78_23090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_23095 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23100 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23105 PF00005 ABC transporter AVCG78_23110 PF00005 ABC transporter AVCG78_23120 PF00027 Cyclic nucleotide-binding domain AVCG78_23120 PF13545 Crp-like helix-turn-helix domain AVCG78_23130 PF01032 FecCD transport family AVCG78_23135 PF00005 ABC transporter AVCG78_23145 PF02630 SCO1/SenC AVCG78_23150 PF01965 DJ-1/PfpI family AVCG78_23155 PF06463 Molybdenum Cofactor Synthesis C AVCG78_23155 PF04055 Radical SAM superfamily AVCG78_23160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_23165 PF00037 4Fe-4S binding domain AVCG78_23165 PF11953 Domain of unknown function (DUF3470) AVCG78_23170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVCG78_23170 PF01568 Molydopterin dinucleotide binding domain AVCG78_23170 PF00384 Molybdopterin oxidoreductase AVCG78_23175 PF12833 Helix-turn-helix domain AVCG78_23175 PF07883 Cupin domain AVCG78_23180 PF14525 AraC-binding-like domain AVCG78_23185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_23185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_23185 PF02770 Acyl-CoA dehydrogenase, middle domain AVCG78_23195 PF00563 EAL domain AVCG78_23195 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_23195 PF03707 Bacterial signalling protein N terminal repeat AVCG78_23200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_23200 PF13426 PAS domain AVCG78_23200 PF08447 PAS fold AVCG78_23220 PF01590 GAF domain AVCG78_23220 PF02954 Bacterial regulatory protein, Fis family AVCG78_23220 PF00158 Sigma-54 interaction domain AVCG78_23225 PF00107 Zinc-binding dehydrogenase AVCG78_23225 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_23235 PF03737 Aldolase/RraA AVCG78_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_23240 PF03466 LysR substrate binding domain AVCG78_23245 PF00364 Biotin-requiring enzyme AVCG78_23260 PF02626 Carboxyltransferase domain, subdomain A and B AVCG78_23265 PF03746 LamB/YcsF family AVCG78_23270 PF00155 Aminotransferase class I and II AVCG78_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_23275 PF03466 LysR substrate binding domain AVCG78_23280 PF00106 short chain dehydrogenase AVCG78_23285 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23290 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23295 PF00005 ABC transporter AVCG78_23300 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_23315 PF01565 FAD binding domain AVCG78_23315 PF02913 FAD linked oxidases, C-terminal domain AVCG78_23320 PF13183 4Fe-4S dicluster domain AVCG78_23320 PF02754 Cysteine-rich domain AVCG78_23320 PF02665 Nitrate reductase gamma subunit AVCG78_23325 PF02913 FAD linked oxidases, C-terminal domain AVCG78_23325 PF01565 FAD binding domain AVCG78_23345 PF00171 Aldehyde dehydrogenase family AVCG78_23350 PF13193 AMP-binding enzyme C-terminal domain AVCG78_23350 PF00501 AMP-binding enzyme AVCG78_23360 PF01039 Carboxyl transferase domain AVCG78_23365 PF00378 Enoyl-CoA hydratase/isomerase AVCG78_23370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVCG78_23370 PF00364 Biotin-requiring enzyme AVCG78_23370 PF00289 Biotin carboxylase, N-terminal domain AVCG78_23370 PF02785 Biotin carboxylase C-terminal domain AVCG78_23375 PF00682 HMGL-like AVCG78_23385 PF00202 Aminotransferase class-III AVCG78_23400 PF03167 Uracil DNA glycosylase superfamily AVCG78_23430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVCG78_23430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVCG78_23435 PF01261 Xylose isomerase-like TIM barrel AVCG78_23440 PF00480 ROK family AVCG78_23445 PF00005 ABC transporter AVCG78_23445 PF08402 TOBE domain AVCG78_23450 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23465 PF01074 Glycosyl hydrolases family 38 N-terminal domain AVCG78_23465 PF07748 Glycosyl hydrolases family 38 C-terminal domain AVCG78_23465 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 AVCG78_23465 PF09261 Alpha mannosidase middle domain AVCG78_23465 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain AVCG78_23470 PF04444 Catechol dioxygenase N terminus AVCG78_23470 PF00775 Dioxygenase AVCG78_23485 PF00465 Iron-containing alcohol dehydrogenase AVCG78_23490 PF01494 FAD binding domain AVCG78_23500 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG78_23500 PF00005 ABC transporter AVCG78_23505 PF00005 ABC transporter AVCG78_23510 PF02653 Branched-chain amino acid transport system / permease component AVCG78_23515 PF11862 Domain of unknown function (DUF3382) AVCG78_23515 PF02653 Branched-chain amino acid transport system / permease component AVCG78_23530 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG78_23550 PF01494 FAD binding domain AVCG78_23555 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVCG78_23580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_23580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_23585 PF07690 Major Facilitator Superfamily AVCG78_23595 PF01144 Coenzyme A transferase AVCG78_23610 PF17645 Arylmalonate decarboxylase AVCG78_23615 PF01614 Bacterial transcriptional regulator AVCG78_23615 PF09339 IclR helix-turn-helix domain AVCG78_23625 PF01613 Flavin reductase like domain AVCG78_23630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVCG78_23630 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AVCG78_23640 PF09339 IclR helix-turn-helix domain AVCG78_23640 PF01614 Bacterial transcriptional regulator AVCG78_23645 PF01042 Endoribonuclease L-PSP AVCG78_23650 PF01266 FAD dependent oxidoreductase AVCG78_23655 PF02423 Ornithine cyclodeaminase/mu-crystallin family AVCG78_23665 PF03466 LysR substrate binding domain AVCG78_23665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_23670 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23675 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23680 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_23685 PF01425 Amidase AVCG78_23690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVCG78_23695 PF01022 Bacterial regulatory protein, arsR family AVCG78_23700 PF00268 Ribonucleotide reductase, small chain AVCG78_23705 PF00317 Ribonucleotide reductase, all-alpha domain AVCG78_23705 PF08343 Ribonucleotide reductase N-terminal AVCG78_23705 PF02867 Ribonucleotide reductase, barrel domain AVCG78_23710 PF07972 NrdI Flavodoxin like AVCG78_23715 PF00462 Glutaredoxin AVCG78_23730 PF07690 Major Facilitator Superfamily AVCG78_23740 PF00356 Bacterial regulatory proteins, lacI family AVCG78_23750 PF00005 ABC transporter AVCG78_23755 PF02653 Branched-chain amino acid transport system / permease component AVCG78_23760 PF00106 short chain dehydrogenase AVCG78_23765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVCG78_23765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVCG78_23770 PF02661 Fic/DOC family AVCG78_23770 PF12728 Helix-turn-helix domain AVCG78_23775 PF14765 Polyketide synthase dehydratase AVCG78_23775 PF08659 KR domain AVCG78_23775 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_23775 PF00550 Phosphopantetheine attachment site AVCG78_23775 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_23775 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_23775 PF00698 Acyl transferase domain AVCG78_23775 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_23785 PF00294 pfkB family carbohydrate kinase AVCG78_23790 PF01418 Helix-turn-helix domain, rpiR family AVCG78_23790 PF01380 SIS domain AVCG78_23795 PF02653 Branched-chain amino acid transport system / permease component AVCG78_23800 PF00005 ABC transporter AVCG78_23805 PF13407 Periplasmic binding protein domain AVCG78_23810 PF01261 Xylose isomerase-like TIM barrel AVCG78_23815 PF00294 pfkB family carbohydrate kinase AVCG78_23825 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23830 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23840 PF03459 TOBE domain AVCG78_23840 PF17912 MalK OB fold domain AVCG78_23840 PF00005 ABC transporter AVCG78_23855 PF00392 Bacterial regulatory proteins, gntR family AVCG78_23855 PF07729 FCD domain AVCG78_23870 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23875 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23880 PF07470 Glycosyl Hydrolase Family 88 AVCG78_23885 PF00005 ABC transporter AVCG78_23885 PF17912 MalK OB fold domain AVCG78_23885 PF03459 TOBE domain AVCG78_23895 PF01547 Bacterial extracellular solute-binding protein AVCG78_23905 PF00132 Bacterial transferase hexapeptide (six repeats) AVCG78_23910 PF00005 ABC transporter AVCG78_23910 PF08402 TOBE domain AVCG78_23920 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23925 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23935 PF01325 Iron dependent repressor, N-terminal DNA binding domain AVCG78_23935 PF00480 ROK family AVCG78_23950 PF00005 ABC transporter AVCG78_23950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_23955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_23960 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23965 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_23965 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_23970 PF04951 D-aminopeptidase AVCG78_23975 PF01112 Asparaginase AVCG78_23990 PF02203 Tar ligand binding domain homologue AVCG78_23990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_23990 PF00672 HAMP domain AVCG78_24015 PF01554 MatE AVCG78_24020 PF00501 AMP-binding enzyme AVCG78_24020 PF00668 Condensation domain AVCG78_24020 PF00550 Phosphopantetheine attachment site AVCG78_24020 PF13193 AMP-binding enzyme C-terminal domain AVCG78_24025 PF00296 Luciferase-like monooxygenase AVCG78_24030 PF00698 Acyl transferase domain AVCG78_24030 PF00668 Condensation domain AVCG78_24030 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_24030 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_24030 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_24030 PF00550 Phosphopantetheine attachment site AVCG78_24035 PF00501 AMP-binding enzyme AVCG78_24040 PF00501 AMP-binding enzyme AVCG78_24040 PF13193 AMP-binding enzyme C-terminal domain AVCG78_24040 PF00668 Condensation domain AVCG78_24040 PF00550 Phosphopantetheine attachment site AVCG78_24040 PF07993 Male sterility protein AVCG78_24045 PF13649 Methyltransferase domain AVCG78_24050 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_24050 PF00550 Phosphopantetheine attachment site AVCG78_24050 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_24050 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_24050 PF00668 Condensation domain AVCG78_24050 PF13193 AMP-binding enzyme C-terminal domain AVCG78_24050 PF00501 AMP-binding enzyme AVCG78_24050 PF00202 Aminotransferase class-III AVCG78_24070 PF02801 Beta-ketoacyl synthase, C-terminal domain AVCG78_24070 PF00550 Phosphopantetheine attachment site AVCG78_24070 PF16197 Ketoacyl-synthetase C-terminal extension AVCG78_24070 PF00698 Acyl transferase domain AVCG78_24070 PF00109 Beta-ketoacyl synthase, N-terminal domain AVCG78_24070 PF00668 Condensation domain AVCG78_24075 PF00501 AMP-binding enzyme AVCG78_24075 PF00668 Condensation domain AVCG78_24075 PF13193 AMP-binding enzyme C-terminal domain AVCG78_24075 PF00550 Phosphopantetheine attachment site AVCG78_24080 PF00550 Phosphopantetheine attachment site AVCG78_24080 PF00668 Condensation domain AVCG78_24080 PF13193 AMP-binding enzyme C-terminal domain AVCG78_24080 PF07993 Male sterility protein AVCG78_24080 PF00668 Condensation domain AVCG78_24080 PF00501 AMP-binding enzyme AVCG78_24080 PF00550 Phosphopantetheine attachment site AVCG78_24080 PF00501 AMP-binding enzyme AVCG78_24080 PF07993 Male sterility protein AVCG78_24080 PF13193 AMP-binding enzyme C-terminal domain AVCG78_24095 PF07715 TonB-dependent Receptor Plug Domain AVCG78_24100 PF01497 Periplasmic binding protein AVCG78_24105 PF01032 FecCD transport family AVCG78_24110 PF01032 FecCD transport family AVCG78_24115 PF00005 ABC transporter AVCG78_24130 PF00873 AcrB/AcrD/AcrF family AVCG78_24145 PF02630 SCO1/SenC AVCG78_24155 PF00440 Bacterial regulatory proteins, tetR family AVCG78_24190 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24195 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_24195 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24200 PF00005 ABC transporter AVCG78_24200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_24205 PF00455 DeoR C terminal sensor domain AVCG78_24205 PF08220 DeoR-like helix-turn-helix domain AVCG78_24210 PF01546 Peptidase family M20/M25/M40 AVCG78_24245 PF07506 RepB plasmid partitioning protein AVCG78_24245 PF02195 ParB-like nuclease domain AVCG78_24250 PF03428 Replication protein C N-terminal domain AVCG78_24250 PF11800 Replication protein C C-terminal region AVCG78_24410 PF02653 Branched-chain amino acid transport system / permease component AVCG78_24415 PF02653 Branched-chain amino acid transport system / permease component AVCG78_24425 PF00171 Aldehyde dehydrogenase family AVCG78_24430 PF04030 D-arabinono-1,4-lactone oxidase AVCG78_24430 PF01565 FAD binding domain AVCG78_24435 PF00296 Luciferase-like monooxygenase AVCG78_24440 PF01590 GAF domain AVCG78_24440 PF00158 Sigma-54 interaction domain AVCG78_24440 PF02954 Bacterial regulatory protein, Fis family AVCG78_24445 PF01613 Flavin reductase like domain AVCG78_24450 PF01266 FAD dependent oxidoreductase AVCG78_24460 PF08402 TOBE domain AVCG78_24460 PF00005 ABC transporter AVCG78_24465 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24470 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24470 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_24475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_24475 PF00005 ABC transporter AVCG78_24480 PF00144 Beta-lactamase AVCG78_24485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_24490 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24495 PF01266 FAD dependent oxidoreductase AVCG78_24515 PF02653 Branched-chain amino acid transport system / permease component AVCG78_24520 PF02653 Branched-chain amino acid transport system / permease component AVCG78_24525 PF00005 ABC transporter AVCG78_24530 PF00356 Bacterial regulatory proteins, lacI family AVCG78_24535 PF02126 Phosphotriesterase family AVCG78_24540 PF00665 Integrase core domain AVCG78_24540 PF13936 Helix-turn-helix domain AVCG78_24565 PF07690 Major Facilitator Superfamily AVCG78_24570 PF03401 Tripartite tricarboxylate transporter family receptor AVCG78_24575 PF01970 Tripartite tricarboxylate transporter TctA family AVCG78_24585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_24585 PF03466 LysR substrate binding domain AVCG78_24590 PF04909 Amidohydrolase AVCG78_24595 PF04909 Amidohydrolase AVCG78_24600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_24600 PF03466 LysR substrate binding domain AVCG78_24605 PF00375 Sodium:dicarboxylate symporter family AVCG78_24610 PF03737 Aldolase/RraA AVCG78_24630 PF01546 Peptidase family M20/M25/M40 AVCG78_24665 PF01548 Transposase AVCG78_24665 PF02371 Transposase IS116/IS110/IS902 family AVCG78_24690 PF00005 ABC transporter AVCG78_24690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_24695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_24695 PF00005 ABC transporter AVCG78_24700 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_24710 PF07702 UTRA domain AVCG78_24710 PF00392 Bacterial regulatory proteins, gntR family AVCG78_24715 PF01380 SIS domain AVCG78_24720 PF00294 pfkB family carbohydrate kinase AVCG78_24725 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG78_24725 PF01968 Hydantoinase/oxoprolinase AVCG78_24730 PF02538 Hydantoinase B/oxoprolinase AVCG78_24735 PF01958 Domain of unknown function DUF108 AVCG78_24735 PF03447 Homoserine dehydrogenase, NAD binding domain AVCG78_24740 PF00291 Pyridoxal-phosphate dependent enzyme AVCG78_24745 PF00155 Aminotransferase class I and II AVCG78_24765 PF00204 DNA gyrase B AVCG78_24765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_24765 PF01751 Toprim domain AVCG78_24765 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG78_24770 PF01751 Toprim domain AVCG78_24770 PF00204 DNA gyrase B AVCG78_24770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_24770 PF00986 DNA gyrase B subunit, carboxyl terminus AVCG78_24775 PF01527 Transposase AVCG78_24795 PF00392 Bacterial regulatory proteins, gntR family AVCG78_24795 PF07702 UTRA domain AVCG78_24800 PF07687 Peptidase dimerisation domain AVCG78_24800 PF01546 Peptidase family M20/M25/M40 AVCG78_24805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_24810 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24815 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_24815 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_24820 PF00005 ABC transporter AVCG78_24820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_24830 PF01321 Creatinase/Prolidase N-terminal domain AVCG78_24830 PF00557 Metallopeptidase family M24 AVCG78_24835 PF00072 Response regulator receiver domain AVCG78_24835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_24835 PF13188 PAS domain AVCG78_24835 PF08448 PAS fold AVCG78_24835 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_24865 PF03358 NADPH-dependent FMN reductase AVCG78_24875 PF00561 alpha/beta hydrolase fold AVCG78_24895 PF04303 PrpF protein AVCG78_24900 PF03737 Aldolase/RraA AVCG78_24905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVCG78_24910 PF02585 GlcNAc-PI de-N-acetylase AVCG78_24925 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVCG78_24925 PF00005 ABC transporter AVCG78_24930 PF00005 ABC transporter AVCG78_24935 PF13458 Periplasmic binding protein AVCG78_24945 PF03466 LysR substrate binding domain AVCG78_24945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_24955 PF13610 DDE domain AVCG78_24970 PF02690 Na+/Pi-cotransporter AVCG78_24990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_24990 PF08447 PAS fold AVCG78_24990 PF13426 PAS domain AVCG78_24995 PF01584 CheW-like domain AVCG78_25000 PF00072 Response regulator receiver domain AVCG78_25000 PF01339 CheB methylesterase AVCG78_25005 PF01739 CheR methyltransferase, SAM binding domain AVCG78_25005 PF03705 CheR methyltransferase, all-alpha domain AVCG78_25010 PF01584 CheW-like domain AVCG78_25010 PF02895 Signal transducing histidine kinase, homodimeric domain AVCG78_25010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25010 PF00072 Response regulator receiver domain AVCG78_25010 PF01627 Hpt domain AVCG78_25020 PF00672 HAMP domain AVCG78_25020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25020 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_25020 PF01627 Hpt domain AVCG78_25020 PF00072 Response regulator receiver domain AVCG78_25030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25030 PF00360 Phytochrome region AVCG78_25030 PF01590 GAF domain AVCG78_25030 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_25030 PF08446 PAS fold AVCG78_25040 PF13185 GAF domain AVCG78_25040 PF00563 EAL domain AVCG78_25040 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_25045 PF03707 Bacterial signalling protein N terminal repeat AVCG78_25045 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_25045 PF00563 EAL domain AVCG78_25065 PF13610 DDE domain AVCG78_25070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25070 PF13426 PAS domain AVCG78_25070 PF00072 Response regulator receiver domain AVCG78_25095 PF13426 PAS domain AVCG78_25095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25095 PF00072 Response regulator receiver domain AVCG78_25110 PF10503 Esterase PHB depolymerase AVCG78_25155 PF13610 DDE domain AVCG78_25160 PF00672 HAMP domain AVCG78_25160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_25175 PF12833 Helix-turn-helix domain AVCG78_25175 PF14525 AraC-binding-like domain AVCG78_25180 PF01609 Transposase DDE domain AVCG78_25195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_25195 PF00672 HAMP domain AVCG78_25210 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_25210 PF00360 Phytochrome region AVCG78_25210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25210 PF01590 GAF domain AVCG78_25210 PF08446 PAS fold AVCG78_25220 PF00672 HAMP domain AVCG78_25220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_25235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25235 PF16736 Single Cache-like AVCG78_25235 PF00989 PAS fold AVCG78_25235 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_25240 PF01339 CheB methylesterase AVCG78_25245 PF01739 CheR methyltransferase, SAM binding domain AVCG78_25245 PF03705 CheR methyltransferase, all-alpha domain AVCG78_25250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVCG78_25250 PF00672 HAMP domain AVCG78_25250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_25250 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_25250 PF01627 Hpt domain AVCG78_25250 PF00072 Response regulator receiver domain AVCG78_25275 PF01381 Helix-turn-helix AVCG78_25310 PF00224 Pyruvate kinase, barrel domain AVCG78_25310 PF02887 Pyruvate kinase, alpha/beta domain AVCG78_25315 PF05161 MOFRL family AVCG78_25315 PF13660 Domain of unknown function (DUF4147) AVCG78_25320 PF00180 Isocitrate/isopropylmalate dehydrogenase AVCG78_25325 PF07690 Major Facilitator Superfamily AVCG78_25330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_25330 PF03466 LysR substrate binding domain AVCG78_25335 PF01202 Shikimate kinase AVCG78_25345 PF00005 ABC transporter AVCG78_25350 PF02653 Branched-chain amino acid transport system / permease component AVCG78_25360 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG78_25360 PF01968 Hydantoinase/oxoprolinase AVCG78_25370 PF00202 Aminotransferase class-III AVCG78_25375 PF00356 Bacterial regulatory proteins, lacI family AVCG78_25430 PF00665 Integrase core domain AVCG78_25430 PF13936 Helix-turn-helix domain AVCG78_25435 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_25440 PF00842 Alanine racemase, C-terminal domain AVCG78_25440 PF01168 Alanine racemase, N-terminal domain AVCG78_25445 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_25450 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_25455 PF00005 ABC transporter AVCG78_25460 PF12833 Helix-turn-helix domain AVCG78_25460 PF01965 DJ-1/PfpI family AVCG78_25475 PF12833 Helix-turn-helix domain AVCG78_25485 PF00196 Bacterial regulatory proteins, luxR family AVCG78_25485 PF03472 Autoinducer binding domain AVCG78_25490 PF06871 TraH_2 AVCG78_25495 PF00795 Carbon-nitrogen hydrolase AVCG78_25500 PF10502 Signal peptidase, peptidase S26 AVCG78_25505 PF03389 MobA/MobL family AVCG78_25505 PF17841 BID domain of Bartonella effector protein (Bep) AVCG78_25505 PF01443 Viral (Superfamily 1) RNA helicase AVCG78_25510 PF07820 TraC-like protein AVCG78_25515 PF06412 Conjugal transfer protein TraD AVCG78_25520 PF02534 Type IV secretory system Conjugative DNA transfer AVCG78_25540 PF04717 Type VI secretion system, phage-baseplate injector AVCG78_25540 PF06715 Gp5 C-terminal repeat (3 copies) AVCG78_25575 PF05406 WGR domain AVCG78_25580 PF00216 Bacterial DNA-binding protein AVCG78_25585 PF05284 Protein of unknown function (DUF736) AVCG78_25595 PF00106 short chain dehydrogenase AVCG78_25610 PF17762 HTH domain found in ParB protein AVCG78_25610 PF02195 ParB-like nuclease domain AVCG78_25615 PF13298 DNA polymerase Ligase (LigD) AVCG78_25615 PF01068 ATP dependent DNA ligase domain AVCG78_25615 PF04679 ATP dependent DNA ligase C terminal region AVCG78_25650 PF00296 Luciferase-like monooxygenase AVCG78_25655 PF07690 Major Facilitator Superfamily AVCG78_25660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_25660 PF03466 LysR substrate binding domain AVCG78_25665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVCG78_25665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVCG78_25675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_25675 PF00005 ABC transporter AVCG78_25680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_25680 PF00005 ABC transporter AVCG78_25690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_25695 PF00005 ABC transporter AVCG78_25710 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_25715 PF05544 Proline racemase AVCG78_25720 PF07687 Peptidase dimerisation domain AVCG78_25720 PF01546 Peptidase family M20/M25/M40 AVCG78_25725 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_25730 PF05544 Proline racemase AVCG78_25735 PF07729 FCD domain AVCG78_25735 PF00392 Bacterial regulatory proteins, gntR family AVCG78_25740 PF02615 Malate/L-lactate dehydrogenase AVCG78_25755 PF07687 Peptidase dimerisation domain AVCG78_25755 PF01546 Peptidase family M20/M25/M40 AVCG78_25760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVCG78_25785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_25785 PF03466 LysR substrate binding domain AVCG78_25795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_25795 PF03466 LysR substrate binding domain AVCG78_25830 PF01555 DNA methylase AVCG78_25830 PF18273 Type III R-M EcoP15I C-terminal domain AVCG78_25850 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVCG78_25850 PF05362 Lon protease (S16) C-terminal proteolytic domain AVCG78_25850 PF00004 ATPase family associated with various cellular activities (AAA) AVCG78_25855 PF04079 Segregation and condensation complex subunit ScpB AVCG78_25865 PF03743 Bacterial conjugation TrbI-like protein AVCG78_25875 PF03524 Conjugal transfer protein AVCG78_25880 PF04335 VirB8 protein AVCG78_25885 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVCG78_25890 PF10907 Protein of unknown function (DUF2749) AVCG78_25900 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVCG78_25905 PF05101 Type IV secretory pathway, VirB3-like protein AVCG78_25910 PF04956 TrbC/VIRB2 family AVCG78_25915 PF00437 Type II/IV secretion system protein AVCG78_25920 PF00765 Autoinducer synthase AVCG78_25930 PF07506 RepB plasmid partitioning protein AVCG78_25930 PF02195 ParB-like nuclease domain AVCG78_25935 PF11800 Replication protein C C-terminal region AVCG78_25935 PF03428 Replication protein C N-terminal domain AVCG78_25955 PF00589 Phage integrase family AVCG78_25965 PF04079 Segregation and condensation complex subunit ScpB AVCG78_26000 PF02735 Ku70/Ku80 beta-barrel domain AVCG78_26005 PF02735 Ku70/Ku80 beta-barrel domain AVCG78_26010 PF13298 DNA polymerase Ligase (LigD) AVCG78_26010 PF01068 ATP dependent DNA ligase domain AVCG78_26010 PF04679 ATP dependent DNA ligase C terminal region AVCG78_26025 PF16657 Maltogenic Amylase, C-terminal domain AVCG78_26025 PF00128 Alpha amylase, catalytic domain AVCG78_26045 PF13426 PAS domain AVCG78_26045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVCG78_26045 PF08447 PAS fold AVCG78_26050 PF00216 Bacterial DNA-binding protein AVCG78_26055 PF01022 Bacterial regulatory protein, arsR family AVCG78_26100 PF07886 BA14K-like protein AVCG78_26110 PF06412 Conjugal transfer protein TraD AVCG78_26115 PF07820 TraC-like protein AVCG78_26145 PF03707 Bacterial signalling protein N terminal repeat AVCG78_26145 PF00990 Diguanylate cyclase, GGDEF domain AVCG78_26145 PF00563 EAL domain AVCG78_26150 PF01381 Helix-turn-helix AVCG78_26160 PF13610 DDE domain AVCG78_26255 PF08401 Domain of unknown function (DUF1738) AVCG78_26255 PF18818 Metallopeptidase superfamily domain AVCG78_26255 PF13362 Toprim domain AVCG78_26295 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_26295 PF00589 Phage integrase family AVCG78_26300 PF00589 Phage integrase family AVCG78_26305 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_26305 PF00589 Phage integrase family AVCG78_26320 PF05284 Protein of unknown function (DUF736) AVCG78_26330 PF00216 Bacterial DNA-binding protein AVCG78_26335 PF05406 WGR domain AVCG78_26345 PF02534 Type IV secretory system Conjugative DNA transfer AVCG78_26350 PF06412 Conjugal transfer protein TraD AVCG78_26355 PF07820 TraC-like protein AVCG78_26360 PF17841 BID domain of Bartonella effector protein (Bep) AVCG78_26360 PF01443 Viral (Superfamily 1) RNA helicase AVCG78_26360 PF03389 MobA/MobL family AVCG78_26365 PF10502 Signal peptidase, peptidase S26 AVCG78_26375 PF06871 TraH_2 AVCG78_26390 PF09228 Prokaryotic Transcriptional repressor TraM AVCG78_26395 PF00196 Bacterial regulatory proteins, luxR family AVCG78_26395 PF03472 Autoinducer binding domain AVCG78_26400 PF01168 Alanine racemase, N-terminal domain AVCG78_26400 PF00842 Alanine racemase, C-terminal domain AVCG78_26405 PF01037 Lrp/AsnC ligand binding domain AVCG78_26420 PF00005 ABC transporter AVCG78_26420 PF08402 TOBE domain AVCG78_26425 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26430 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26435 PF00202 Aminotransferase class-III AVCG78_26440 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26445 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26450 PF13416 Bacterial extracellular solute-binding protein AVCG78_26455 PF00005 ABC transporter AVCG78_26455 PF08402 TOBE domain AVCG78_26460 PF00171 Aldehyde dehydrogenase family AVCG78_26465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_26475 PF01266 FAD dependent oxidoreductase AVCG78_26490 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26495 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26500 PF08402 TOBE domain AVCG78_26500 PF00005 ABC transporter AVCG78_26510 PF02538 Hydantoinase B/oxoprolinase AVCG78_26515 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG78_26515 PF01968 Hydantoinase/oxoprolinase AVCG78_26525 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26530 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_26530 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_26535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_26535 PF00005 ABC transporter AVCG78_26545 PF08240 Alcohol dehydrogenase GroES-like domain AVCG78_26545 PF00107 Zinc-binding dehydrogenase AVCG78_26550 PF00171 Aldehyde dehydrogenase family AVCG78_26575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVCG78_26575 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AVCG78_26585 PF13614 AAA domain AVCG78_26605 PF13340 Putative transposase of IS4/5 family (DUF4096) AVCG78_26620 PF13592 Winged helix-turn helix AVCG78_26630 PF02534 Type IV secretory system Conjugative DNA transfer AVCG78_26640 PF03432 Relaxase/Mobilisation nuclease domain AVCG78_26645 PF07328 T-DNA border endonuclease VirD1 AVCG78_26650 PF07015 VirC1 protein AVCG78_26655 PF07181 VirC2 protein AVCG78_26660 PF00486 Transcriptional regulatory protein, C terminal AVCG78_26660 PF00072 Response regulator receiver domain AVCG78_26665 PF00437 Type II/IV secretion system protein AVCG78_26670 PF03743 Bacterial conjugation TrbI-like protein AVCG78_26675 PF03524 Conjugal transfer protein AVCG78_26680 PF04335 VirB8 protein AVCG78_26685 PF17413 Outer membrane lipoprotein virB7 AVCG78_26690 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVCG78_26700 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVCG78_26705 PF05101 Type IV secretory pathway, VirB3-like protein AVCG78_26710 PF04956 TrbC/VIRB2 family AVCG78_26715 PF01464 Transglycosylase SLT domain AVCG78_26735 PF13005 zinc-finger binding domain of transposase IS66 AVCG78_26735 PF13007 Transposase C of IS166 homeodomain AVCG78_26735 PF03050 Transposase IS66 family AVCG78_26735 PF13817 IS66 C-terminal element AVCG78_26775 PF07229 VirE2 AVCG78_26780 PF12189 Single-strand DNA-binding protein AVCG78_26790 PF13340 Putative transposase of IS4/5 family (DUF4096) AVCG78_26810 PF03050 Transposase IS66 family AVCG78_26810 PF13007 Transposase C of IS166 homeodomain AVCG78_26810 PF13005 zinc-finger binding domain of transposase IS66 AVCG78_26810 PF13817 IS66 C-terminal element AVCG78_26815 PF00512 His Kinase A (phospho-acceptor) domain AVCG78_26815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVCG78_26820 PF00067 Cytochrome P450 AVCG78_26825 PF00589 Phage integrase family AVCG78_26850 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_26850 PF00589 Phage integrase family AVCG78_26860 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_26860 PF00589 Phage integrase family AVCG78_26865 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_26865 PF00589 Phage integrase family AVCG78_26870 PF02899 Phage integrase, N-terminal SAM-like domain AVCG78_26870 PF00589 Phage integrase family AVCG78_26890 PF02027 RolB/RolC glucosidase family AVCG78_26895 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AVCG78_26940 PF00872 Transposase, Mutator family AVCG78_26960 PF01527 Transposase AVCG78_26965 PF01425 Amidase AVCG78_26970 PF02027 RolB/RolC glucosidase family AVCG78_26970 PF01593 Flavin containing amine oxidoreductase AVCG78_27010 PF04324 BFD-like [2Fe-2S] binding domain AVCG78_27010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_27020 PF01266 FAD dependent oxidoreductase AVCG78_27025 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_27030 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_27035 PF08402 TOBE domain AVCG78_27035 PF00005 ABC transporter AVCG78_27040 PF13416 Bacterial extracellular solute-binding protein AVCG78_27045 PF03466 LysR substrate binding domain AVCG78_27045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_27050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVCG78_27050 PF00005 ABC transporter AVCG78_27055 PF12911 N-terminal TM domain of oligopeptide transport permease C AVCG78_27055 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_27060 PF00528 Binding-protein-dependent transport system inner membrane component AVCG78_27065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVCG78_27075 PF04324 BFD-like [2Fe-2S] binding domain AVCG78_27075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVCG78_27090 PF01968 Hydantoinase/oxoprolinase AVCG78_27090 PF05378 Hydantoinase/oxoprolinase N-terminal region AVCG78_27095 PF01266 FAD dependent oxidoreductase AVCG78_27100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVCG78_27100 PF03466 LysR substrate binding domain AVCG78_27105 PF03743 Bacterial conjugation TrbI-like protein AVCG78_27115 PF03524 Conjugal transfer protein AVCG78_27120 PF04335 VirB8 protein AVCG78_27125 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AVCG78_27130 PF10907 Protein of unknown function (DUF2749) AVCG78_27140 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AVCG78_27145 PF05101 Type IV secretory pathway, VirB3-like protein AVCG78_27150 PF04956 TrbC/VIRB2 family AVCG78_27155 PF00437 Type II/IV secretion system protein AVCG78_27160 PF00765 Autoinducer synthase