locus-tag class description JSQ78_00005 PF02811 PHP domain JSQ78_00010 PF00270 DEAD/DEAH box helicase JSQ78_00010 PF00271 Helicase conserved C-terminal domain JSQ78_00035 PF00580 UvrD/REP helicase N-terminal domain JSQ78_00035 PF13361 UvrD-like helicase C-terminal domain JSQ78_00045 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JSQ78_00045 PF00293 NUDIX domain JSQ78_00045 PF09297 NADH pyrophosphatase zinc ribbon domain JSQ78_00050 PF00570 HRDC domain JSQ78_00050 PF00580 UvrD/REP helicase N-terminal domain JSQ78_00050 PF13361 UvrD-like helicase C-terminal domain JSQ78_00065 PF05362 Lon protease (S16) C-terminal proteolytic domain JSQ78_00065 PF13180 PDZ domain JSQ78_00070 PF03699 Uncharacterised protein family (UPF0182) JSQ78_00100 PF00795 Carbon-nitrogen hydrolase JSQ78_00105 PF00155 Aminotransferase class I and II JSQ78_00110 PF13180 PDZ domain JSQ78_00125 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JSQ78_00125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JSQ78_00140 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_00145 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_00150 PF00005 ABC transporter JSQ78_00150 PF00571 CBS domain JSQ78_00170 PF01177 Asp/Glu/Hydantoin racemase JSQ78_00175 PF01138 3' exoribonuclease family, domain 1 JSQ78_00175 PF03725 3' exoribonuclease family, domain 2 JSQ78_00180 PF01725 Ham1 family JSQ78_00185 PF01297 Zinc-uptake complex component A periplasmic JSQ78_00190 PF00005 ABC transporter JSQ78_00195 PF00950 ABC 3 transport family JSQ78_00200 PF01325 Iron dependent repressor, N-terminal DNA binding domain JSQ78_00200 PF02742 Iron dependent repressor, metal binding and dimerisation domain JSQ78_00200 PF18357 Diphteria toxin repressor SH3 domain JSQ78_00205 PF09335 SNARE associated Golgi protein JSQ78_00215 PF00106 short chain dehydrogenase JSQ78_00220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JSQ78_00220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JSQ78_00225 PF03358 NADPH-dependent FMN reductase JSQ78_00225 PF01566 Natural resistance-associated macrophage protein JSQ78_00240 PF00561 alpha/beta hydrolase fold JSQ78_00245 PF00437 Type II/IV secretion system protein JSQ78_00335 PF01555 DNA methylase JSQ78_00575 PF00069 Protein kinase domain JSQ78_00585 PF03462 PCRF domain JSQ78_00585 PF00472 RF-1 domain JSQ78_00590 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JSQ78_00590 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JSQ78_00595 PF00005 ABC transporter JSQ78_00600 PF18075 FtsX extracellular domain JSQ78_00600 PF02687 FtsX-like permease family JSQ78_00605 PF01668 SmpB protein JSQ78_00610 PF00365 Phosphofructokinase JSQ78_00620 PF00171 Aldehyde dehydrogenase family JSQ78_00645 PF00459 Inositol monophosphatase family JSQ78_00650 PF03193 RsgA GTPase JSQ78_00655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JSQ78_00660 PF04542 Sigma-70 region 2 JSQ78_00660 PF08281 Sigma-70, region 4 JSQ78_00670 PF01274 Malate synthase JSQ78_00675 PF00463 Isocitrate lyase family JSQ78_00710 PF13439 Glycosyltransferase Family 4 JSQ78_00710 PF00534 Glycosyl transferases group 1 JSQ78_00725 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ78_00725 PF14602 Hexapeptide repeat of succinyl-transferase JSQ78_00725 PF12464 Maltose acetyltransferase JSQ78_00730 PF00801 PKD domain JSQ78_00730 PF05547 Immune inhibitor A peptidase M6 JSQ78_00750 PF13614 AAA domain JSQ78_00760 PF02397 Bacterial sugar transferase JSQ78_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ78_00765 PF16078 2-oxoglutarate dehydrogenase N-terminus JSQ78_00765 PF00676 Dehydrogenase E1 component JSQ78_00765 PF16870 2-oxoglutarate dehydrogenase C-terminal JSQ78_00765 PF02779 Transketolase, pyrimidine binding domain JSQ78_00765 PF02779 Transketolase, pyrimidine binding domain JSQ78_00765 PF16870 2-oxoglutarate dehydrogenase C-terminal JSQ78_00765 PF00676 Dehydrogenase E1 component JSQ78_00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ78_00765 PF16078 2-oxoglutarate dehydrogenase N-terminus JSQ78_00775 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JSQ78_00775 PF09281 Taq polymerase, exonuclease JSQ78_00775 PF01367 5'-3' exonuclease, C-terminal SAM fold JSQ78_00775 PF00476 DNA polymerase family A JSQ78_00780 PF00478 IMP dehydrogenase / GMP reductase domain JSQ78_00780 PF00571 CBS domain JSQ78_00785 PF01595 Cyclin M transmembrane N-terminal domain JSQ78_00785 PF03471 Transporter associated domain JSQ78_00785 PF00571 CBS domain JSQ78_00790 PF01595 Cyclin M transmembrane N-terminal domain JSQ78_00790 PF00571 CBS domain JSQ78_00795 PF00561 alpha/beta hydrolase fold JSQ78_00800 PF01053 Cys/Met metabolism PLP-dependent enzyme JSQ78_00805 PF00106 short chain dehydrogenase JSQ78_00810 PF07690 Major Facilitator Superfamily JSQ78_00820 PF02620 Large ribosomal RNA subunit accumulation protein YceD JSQ78_00825 PF01783 Ribosomal L32p protein family JSQ78_00830 PF14622 Ribonuclease-III-like JSQ78_00830 PF00035 Double-stranded RNA binding motif JSQ78_00835 PF06827 Zinc finger found in FPG and IleRS JSQ78_00835 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JSQ78_00835 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JSQ78_00845 PF00171 Aldehyde dehydrogenase family JSQ78_00860 PF02463 RecF/RecN/SMC N terminal domain JSQ78_00860 PF06470 SMC proteins Flexible Hinge Domain JSQ78_00875 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JSQ78_00885 PF05175 Methyltransferase small domain JSQ78_00890 PF06029 AlkA N-terminal domain JSQ78_00890 PF00730 HhH-GPD superfamily base excision DNA repair protein JSQ78_00895 PF03741 Integral membrane protein TerC family JSQ78_00900 PF00448 SRP54-type protein, GTPase domain JSQ78_00900 PF02881 SRP54-type protein, helical bundle domain JSQ78_00910 PF00448 SRP54-type protein, GTPase domain JSQ78_00910 PF02881 SRP54-type protein, helical bundle domain JSQ78_00910 PF02978 Signal peptide binding domain JSQ78_00915 PF01497 Periplasmic binding protein JSQ78_00920 PF01032 FecCD transport family JSQ78_00925 PF01032 FecCD transport family JSQ78_00930 PF00005 ABC transporter JSQ78_00945 PF00296 Luciferase-like monooxygenase JSQ78_00950 PF04107 Glutamate-cysteine ligase family 2(GCS2) JSQ78_00955 PF00886 Ribosomal protein S16 JSQ78_00965 PF01782 RimM N-terminal domain JSQ78_00970 PF01746 tRNA (Guanine-1)-methyltransferase JSQ78_00980 PF01245 Ribosomal protein L19 JSQ78_00985 PF10502 Signal peptidase, peptidase S26 JSQ78_00990 PF01351 Ribonuclease HII JSQ78_00995 PF10611 Protein of unknown function (DUF2469) JSQ78_01000 PF02021 Uncharacterised protein family UPF0102 JSQ78_01005 PF13335 Magnesium chelatase, subunit ChlI C-terminal JSQ78_01005 PF01078 Magnesium chelatase, subunit ChlI JSQ78_01010 PF17782 DprA winged helix domain JSQ78_01010 PF02481 DNA recombination-mediator protein A JSQ78_01015 PF00149 Calcineurin-like phosphoesterase JSQ78_01020 PF00589 Phage integrase family JSQ78_01020 PF02899 Phage integrase, N-terminal SAM-like domain JSQ78_01025 PF01551 Peptidase family M23 JSQ78_01030 PF00318 Ribosomal protein S2 JSQ78_01035 PF00889 Elongation factor TS JSQ78_01040 PF00696 Amino acid kinase family JSQ78_01045 PF01765 Ribosome recycling factor JSQ78_01070 PF01594 AI-2E family transporter JSQ78_01080 PF00085 Thioredoxin JSQ78_01085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JSQ78_01085 PF02806 Alpha amylase, C-terminal all-beta domain JSQ78_01085 PF00128 Alpha amylase, catalytic domain JSQ78_01090 PF00343 Carbohydrate phosphorylase JSQ78_01090 PF11897 Protein of unknown function (DUF3417) JSQ78_01095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JSQ78_01095 PF00128 Alpha amylase, catalytic domain JSQ78_01100 PF00266 Aminotransferase class-V JSQ78_01110 PF00535 Glycosyl transferase family 2 JSQ78_01135 PF00533 BRCA1 C Terminus (BRCT) domain JSQ78_01135 PF03120 NAD-dependent DNA ligase OB-fold domain JSQ78_01135 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JSQ78_01135 PF12826 Helix-hairpin-helix motif JSQ78_01135 PF01653 NAD-dependent DNA ligase adenylation domain JSQ78_01150 PF04055 Radical SAM superfamily JSQ78_01160 PF02686 Glu-tRNAGln amidotransferase C subunit JSQ78_01165 PF01425 Amidase JSQ78_01170 PF02934 GatB/GatE catalytic domain JSQ78_01170 PF02637 GatB domain JSQ78_01175 PF04226 Transglycosylase associated protein JSQ78_01185 PF00296 Luciferase-like monooxygenase JSQ78_01200 PF09819 ABC-type cobalt transport system, permease component JSQ78_01205 PF00005 ABC transporter JSQ78_01230 PF08021 Siderophore-interacting FAD-binding domain JSQ78_01230 PF04954 Siderophore-interacting protein JSQ78_01245 PF00929 Exonuclease JSQ78_01250 PF13419 Haloacid dehalogenase-like hydrolase JSQ78_01265 PF09335 SNARE associated Golgi protein JSQ78_01270 PF04264 YceI-like domain JSQ78_01280 PF01625 Peptide methionine sulfoxide reductase JSQ78_01285 PF00436 Single-strand binding protein family JSQ78_01300 PF00005 ABC transporter JSQ78_01300 PF12848 ABC transporter JSQ78_01305 PF03061 Thioesterase superfamily JSQ78_01310 PF00171 Aldehyde dehydrogenase family JSQ78_01315 PF13302 Acetyltransferase (GNAT) domain JSQ78_01320 PF02551 Acyl-CoA thioesterase JSQ78_01345 PF02586 SOS response associated peptidase (SRAP) JSQ78_01350 PF00440 Bacterial regulatory proteins, tetR family JSQ78_01350 PF17925 Tetracyclin repressor-like, C-terminal domain JSQ78_01365 PF00117 Glutamine amidotransferase class-I JSQ78_01365 PF00425 chorismate binding enzyme JSQ78_01365 PF04715 Anthranilate synthase component I, N terminal region JSQ78_01385 PF08264 Anticodon-binding domain of tRNA JSQ78_01385 PF09334 tRNA synthetases class I (M) JSQ78_01385 PF00133 tRNA synthetases class I (I, L, M and V) JSQ78_01385 PF13603 Leucyl-tRNA synthetase, Domain 2 JSQ78_01405 PF01381 Helix-turn-helix JSQ78_01405 PF07883 Cupin domain JSQ78_01410 PF00491 Arginase family JSQ78_01425 PF04199 Putative cyclase JSQ78_01430 PF01649 Ribosomal protein S20 JSQ78_01435 PF00679 Elongation factor G C-terminus JSQ78_01435 PF00009 Elongation factor Tu GTP binding domain JSQ78_01435 PF06421 GTP-binding protein LepA C-terminus JSQ78_01445 PF04055 Radical SAM superfamily JSQ78_01455 PF01628 HrcA protein C terminal domain JSQ78_01460 PF00226 DnaJ domain JSQ78_01460 PF01556 DnaJ C terminal domain JSQ78_01460 PF00684 DnaJ central domain JSQ78_01465 PF04452 RNA methyltransferase JSQ78_01470 PF01230 HIT domain JSQ78_01475 PF02562 PhoH-like protein JSQ78_01480 PF02130 Uncharacterized protein family UPF0054 JSQ78_01485 PF03471 Transporter associated domain JSQ78_01485 PF00571 CBS domain JSQ78_01485 PF01595 Cyclin M transmembrane N-terminal domain JSQ78_01490 PF07650 KH domain JSQ78_01490 PF01926 50S ribosome-binding GTPase JSQ78_01495 PF07730 Histidine kinase JSQ78_01500 PF00196 Bacterial regulatory proteins, luxR family JSQ78_01500 PF00072 Response regulator receiver domain JSQ78_01505 PF12697 Alpha/beta hydrolase family JSQ78_01505 PF08241 Methyltransferase domain JSQ78_01510 PF00005 ABC transporter JSQ78_01510 PF12704 MacB-like periplasmic core domain JSQ78_01510 PF02687 FtsX-like permease family JSQ78_01515 PF12704 MacB-like periplasmic core domain JSQ78_01515 PF02687 FtsX-like permease family JSQ78_01520 PF00682 HMGL-like JSQ78_01520 PF08502 LeuA allosteric (dimerisation) domain JSQ78_01525 PF11967 Recombination protein O N terminal JSQ78_01525 PF02565 Recombination protein O C terminal JSQ78_01530 PF01255 Putative undecaprenyl diphosphate synthase JSQ78_01540 PF09957 Bacterial antitoxin of type II TA system, VapB JSQ78_01545 PF01850 PIN domain JSQ78_01555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ78_01555 PF03129 Anticodon binding domain JSQ78_01560 PF01207 Dihydrouridine synthase (Dus) JSQ78_01565 PF01966 HD domain JSQ78_01565 PF13286 Phosphohydrolase-associated domain JSQ78_01570 PF01807 CHC2 zinc finger JSQ78_01570 PF08275 DNA primase catalytic core, N-terminal domain JSQ78_01570 PF13662 Toprim domain JSQ78_01570 PF08278 DNA primase DnaG DnaB-binding JSQ78_01570 PF10410 DnaB-helicase binding domain of primase JSQ78_01580 PF01139 tRNA-splicing ligase RtcB JSQ78_01595 PF01327 Polypeptide deformylase JSQ78_01605 PF00534 Glycosyl transferases group 1 JSQ78_01620 PF00107 Zinc-binding dehydrogenase JSQ78_01620 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_01630 PF01569 PAP2 superfamily JSQ78_01640 PF14031 Putative serine dehydratase domain JSQ78_01640 PF01168 Alanine racemase, N-terminal domain JSQ78_01665 PF02801 Beta-ketoacyl synthase, C-terminal domain JSQ78_01665 PF00109 Beta-ketoacyl synthase, N-terminal domain JSQ78_01670 PF00550 Phosphopantetheine attachment site JSQ78_01675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JSQ78_01675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JSQ78_01680 PF00698 Acyl transferase domain JSQ78_01685 PF13556 PucR C-terminal helix-turn-helix domain JSQ78_01685 PF17853 GGDEF-like domain JSQ78_01690 PF17831 Pyruvate dehydrogenase E1 component middle domain JSQ78_01690 PF00456 Transketolase, thiamine diphosphate binding domain JSQ78_01695 PF00578 AhpC/TSA family JSQ78_01715 PF01784 NIF3 (NGG1p interacting factor 3) JSQ78_01740 PF00480 ROK family JSQ78_01745 PF00557 Metallopeptidase family M24 JSQ78_01760 PF02548 Ketopantoate hydroxymethyltransferase JSQ78_01765 PF00120 Glutamine synthetase, catalytic domain JSQ78_01765 PF03951 Glutamine synthetase, beta-Grasp domain JSQ78_01770 PF08335 GlnD PII-uridylyltransferase JSQ78_01770 PF03710 Glutamate-ammonia ligase adenylyltransferase JSQ78_01780 PF03951 Glutamine synthetase, beta-Grasp domain JSQ78_01780 PF00120 Glutamine synthetase, catalytic domain JSQ78_01795 PF02817 e3 binding domain JSQ78_01795 PF00364 Biotin-requiring enzyme JSQ78_01795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ78_01800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JSQ78_01800 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_01805 PF02789 Cytosol aminopeptidase family, N-terminal domain JSQ78_01805 PF00883 Cytosol aminopeptidase family, catalytic domain JSQ78_01820 PF04545 Sigma-70, region 4 JSQ78_01820 PF04539 Sigma-70 region 3 JSQ78_01820 PF04542 Sigma-70 region 2 JSQ78_01820 PF00140 Sigma-70 factor, region 1.2 JSQ78_01825 PF00497 Bacterial extracellular solute-binding proteins, family 3 JSQ78_01830 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_01835 PF00005 ABC transporter JSQ78_01845 PF01751 Toprim domain JSQ78_01845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_01845 PF00986 DNA gyrase B subunit, carboxyl terminus JSQ78_01845 PF00204 DNA gyrase B JSQ78_01850 PF00521 DNA gyrase/topoisomerase IV, subunit A JSQ78_01850 PF03989 DNA gyrase C-terminal domain, beta-propeller JSQ78_01860 PF00107 Zinc-binding dehydrogenase JSQ78_01860 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_01865 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JSQ78_01865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JSQ78_01870 PF00083 Sugar (and other) transporter JSQ78_01890 PF00692 dUTPase JSQ78_01905 PF00694 Aconitase C-terminal domain JSQ78_01905 PF00330 Aconitase family (aconitate hydratase) JSQ78_01910 PF02780 Transketolase, C-terminal domain JSQ78_01910 PF02779 Transketolase, pyrimidine binding domain JSQ78_01910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JSQ78_01920 PF03853 YjeF-related protein N-terminus JSQ78_01920 PF01256 Carbohydrate kinase JSQ78_01925 PF05175 Methyltransferase small domain JSQ78_01925 PF17827 PrmC N-terminal domain JSQ78_01930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JSQ78_01930 PF00378 Enoyl-CoA hydratase/isomerase JSQ78_01930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JSQ78_01935 PF02803 Thiolase, C-terminal domain JSQ78_01935 PF00108 Thiolase, N-terminal domain JSQ78_01950 PF07634 RtxA repeat JSQ78_01950 PF11713 Peptidase C80 family JSQ78_01950 PF11647 Membrane Localization Domain JSQ78_01950 PF12146 Serine aminopeptidase, S33 JSQ78_01950 PF16671 Actin cross-linking domain JSQ78_01955 PF02657 Fe-S metabolism associated domain JSQ78_01960 PF00581 Rhodanese-like domain JSQ78_01970 PF06965 Na+/H+ antiporter 1 JSQ78_01975 PF00909 Ammonium Transporter Family JSQ78_01985 PF00872 Transposase, Mutator family JSQ78_02030 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JSQ78_02035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ78_02035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JSQ78_02035 PF03129 Anticodon binding domain JSQ78_02040 PF01230 HIT domain JSQ78_02045 PF01680 SOR/SNZ family JSQ78_02050 PF01174 SNO glutamine amidotransferase family JSQ78_02065 PF01709 Transcriptional regulator JSQ78_02070 PF02075 Crossover junction endodeoxyribonuclease RuvC JSQ78_02085 PF17864 RuvB AAA lid domain JSQ78_02085 PF05491 RuvB C-terminal winged helix domain JSQ78_02085 PF05496 Holliday junction DNA helicase RuvB P-loop domain JSQ78_02095 PF07549 SecD/SecF GG Motif JSQ78_02095 PF02355 Protein export membrane protein JSQ78_02100 PF02355 Protein export membrane protein JSQ78_02100 PF07549 SecD/SecF GG Motif JSQ78_02105 PF02824 TGS domain JSQ78_02105 PF04607 Region found in RelA / SpoT proteins JSQ78_02105 PF13291 ACT domain JSQ78_02110 PF00480 ROK family JSQ78_02110 PF01047 MarR family JSQ78_02120 PF03993 Domain of Unknown Function (DUF349) JSQ78_02130 PF00004 ATPase family associated with various cellular activities (AAA) JSQ78_02130 PF12002 MgsA AAA+ ATPase C terminal JSQ78_02130 PF16193 AAA C-terminal domain JSQ78_02135 PF00163 Ribosomal protein S4/S9 N-terminal domain JSQ78_02135 PF01479 S4 domain JSQ78_02145 PF01411 tRNA synthetases class II (A) JSQ78_02145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JSQ78_02145 PF02272 DHHA1 domain JSQ78_02150 PF03652 Holliday junction resolvase JSQ78_02155 PF02618 YceG-like family JSQ78_02160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JSQ78_02160 PF01488 Shikimate / quinate 5-dehydrogenase JSQ78_02160 PF08501 Shikimate dehydrogenase substrate binding domain JSQ78_02165 PF01264 Chorismate synthase JSQ78_02170 PF01202 Shikimate kinase JSQ78_02175 PF01761 3-dehydroquinate synthase JSQ78_02180 PF01220 Dehydroquinase class II JSQ78_02185 PF01132 Elongation factor P (EF-P) OB domain JSQ78_02185 PF08207 Elongation factor P (EF-P) KOW-like domain JSQ78_02185 PF09285 Elongation factor P, C-terminal JSQ78_02190 PF01029 NusB family JSQ78_02200 PF00156 Phosphoribosyl transferase domain JSQ78_02205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JSQ78_02205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JSQ78_02210 PF01979 Amidohydrolase family JSQ78_02220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JSQ78_02220 PF00117 Glutamine amidotransferase class-I JSQ78_02225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ78_02225 PF02142 MGS-like domain JSQ78_02225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JSQ78_02230 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JSQ78_02235 PF00625 Guanylate kinase JSQ78_02240 PF01192 RNA polymerase Rpb6 JSQ78_02245 PF04127 DNA / pantothenate metabolism flavoprotein JSQ78_02245 PF02441 Flavoprotein JSQ78_02250 PF02773 S-adenosylmethionine synthetase, C-terminal domain JSQ78_02250 PF00438 S-adenosylmethionine synthetase, N-terminal domain JSQ78_02250 PF02772 S-adenosylmethionine synthetase, central domain JSQ78_02255 PF18074 Primosomal protein N C-terminal domain JSQ78_02255 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JSQ78_02255 PF17764 3′ DNA-binding domain (3′BD) JSQ78_02255 PF00271 Helicase conserved C-terminal domain JSQ78_02255 PF00270 DEAD/DEAH box helicase JSQ78_02260 PF00551 Formyl transferase JSQ78_02260 PF02911 Formyl transferase, C-terminal domain JSQ78_02265 PF01029 NusB family JSQ78_02265 PF01189 16S rRNA methyltransferase RsmB/F JSQ78_02270 PF00834 Ribulose-phosphate 3 epimerase family JSQ78_02275 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JSQ78_02280 PF01634 ATP phosphoribosyltransferase JSQ78_02280 PF08029 HisG, C-terminal domain JSQ78_02285 PF00977 Histidine biosynthesis protein JSQ78_02290 PF01502 Phosphoribosyl-AMP cyclohydrolase JSQ78_02295 PF00425 chorismate binding enzyme JSQ78_02295 PF04715 Anthranilate synthase component I, N terminal region JSQ78_02310 PF00218 Indole-3-glycerol phosphate synthase JSQ78_02315 PF00291 Pyridoxal-phosphate dependent enzyme JSQ78_02320 PF00290 Tryptophan synthase alpha chain JSQ78_02325 PF01790 Prolipoprotein diacylglyceryl transferase JSQ78_02330 PF04898 Glutamate synthase central domain JSQ78_02330 PF01493 GXGXG motif JSQ78_02330 PF00310 Glutamine amidotransferases class-II JSQ78_02330 PF01645 Conserved region in glutamate synthase JSQ78_02335 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_02335 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JSQ78_02340 PF02887 Pyruvate kinase, alpha/beta domain JSQ78_02340 PF00224 Pyruvate kinase, barrel domain JSQ78_02350 PF00072 Response regulator receiver domain JSQ78_02350 PF03861 ANTAR domain JSQ78_02360 PF03061 Thioesterase superfamily JSQ78_02365 PF00476 DNA polymerase family A JSQ78_02365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JSQ78_02365 PF01367 5'-3' exonuclease, C-terminal SAM fold JSQ78_02370 PF00296 Luciferase-like monooxygenase JSQ78_02380 PF00575 S1 RNA binding domain JSQ78_02385 PF00144 Beta-lactamase JSQ78_02395 PF00672 HAMP domain JSQ78_02395 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_02395 PF13426 PAS domain JSQ78_02395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_02405 PF00486 Transcriptional regulatory protein, C terminal JSQ78_02405 PF00072 Response regulator receiver domain JSQ78_02410 PF01121 Dephospho-CoA kinase JSQ78_02415 PF00271 Helicase conserved C-terminal domain JSQ78_02415 PF04851 Type III restriction enzyme, res subunit JSQ78_02415 PF02151 UvrB/uvrC motif JSQ78_02415 PF12344 Ultra-violet resistance protein B JSQ78_02415 PF17757 UvrB interaction domain JSQ78_02425 PF02785 Biotin carboxylase C-terminal domain JSQ78_02425 PF00289 Biotin carboxylase, N-terminal domain JSQ78_02425 PF00364 Biotin-requiring enzyme JSQ78_02425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ78_02430 PF00005 ABC transporter JSQ78_02430 PF17760 UvrA interaction domain JSQ78_02430 PF17755 UvrA DNA-binding domain JSQ78_02435 PF08459 UvrC Helix-hairpin-helix N-terminal JSQ78_02435 PF01541 GIY-YIG catalytic domain JSQ78_02435 PF02151 UvrB/uvrC motif JSQ78_02440 PF03668 P-loop ATPase protein family JSQ78_02445 PF10298 WhiA N-terminal LAGLIDADG-like domain JSQ78_02445 PF14527 WhiA LAGLIDADG-like domain JSQ78_02445 PF02650 WhiA C-terminal HTH domain JSQ78_02450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JSQ78_02450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JSQ78_02455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JSQ78_02455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JSQ78_02460 PF00162 Phosphoglycerate kinase JSQ78_02465 PF00121 Triosephosphate isomerase JSQ78_02470 PF03840 Preprotein translocase SecG subunit JSQ78_02480 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JSQ78_02490 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JSQ78_02490 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JSQ78_02495 PF00342 Phosphoglucose isomerase JSQ78_02500 PF00923 Transaldolase/Fructose-6-phosphate aldolase JSQ78_02505 PF02779 Transketolase, pyrimidine binding domain JSQ78_02505 PF02780 Transketolase, C-terminal domain JSQ78_02505 PF00456 Transketolase, thiamine diphosphate binding domain JSQ78_02510 PF01040 UbiA prenyltransferase family JSQ78_02515 PF02541 Ppx/GppA phosphatase family JSQ78_02520 PF02628 Cytochrome oxidase assembly protein JSQ78_02525 PF01458 Uncharacterized protein family (UPF0051) JSQ78_02530 PF01458 Uncharacterized protein family (UPF0051) JSQ78_02535 PF00355 Rieske [2Fe-2S] domain JSQ78_02540 PF00005 ABC transporter JSQ78_02545 PF01883 Iron-sulfur cluster assembly protein JSQ78_02555 PF00271 Helicase conserved C-terminal domain JSQ78_02555 PF00270 DEAD/DEAH box helicase JSQ78_02555 PF03880 DbpA RNA binding domain JSQ78_02565 PF02632 BioY family JSQ78_02575 PF12848 ABC transporter JSQ78_02575 PF16326 ABC transporter C-terminal domain JSQ78_02575 PF00005 ABC transporter JSQ78_02580 PF03458 UPF0126 domain JSQ78_02615 PF00483 Nucleotidyl transferase JSQ78_02620 PF00534 Glycosyl transferases group 1 JSQ78_02620 PF13439 Glycosyltransferase Family 4 JSQ78_02625 PF00005 ABC transporter JSQ78_02630 PF01197 Ribosomal protein L31 JSQ78_02640 PF00929 Exonuclease JSQ78_02650 PF00534 Glycosyl transferases group 1 JSQ78_02650 PF13439 Glycosyltransferase Family 4 JSQ78_02655 PF02146 Sir2 family JSQ78_02660 PF00588 SpoU rRNA Methylase family JSQ78_02675 PF11799 impB/mucB/samB family C-terminal domain JSQ78_02675 PF00817 impB/mucB/samB family JSQ78_02690 PF07687 Peptidase dimerisation domain JSQ78_02690 PF01546 Peptidase family M20/M25/M40 JSQ78_02695 PF02673 Bacitracin resistance protein BacA JSQ78_02700 PF01406 tRNA synthetases class I (C) catalytic domain JSQ78_02710 PF13419 Haloacid dehalogenase-like hydrolase JSQ78_02715 PF08704 tRNA methyltransferase complex GCD14 subunit JSQ78_02725 PF13280 WYL domain JSQ78_02740 PF00902 Sec-independent protein translocase protein (TatC) JSQ78_02745 PF00271 Helicase conserved C-terminal domain JSQ78_02745 PF00270 DEAD/DEAH box helicase JSQ78_02745 PF08148 DSHCT (NUC185) domain JSQ78_02755 PF00535 Glycosyl transferase family 2 JSQ78_02780 PF07676 WD40-like Beta Propeller Repeat JSQ78_02780 PF00326 Prolyl oligopeptidase family JSQ78_02795 PF00781 Diacylglycerol kinase catalytic domain JSQ78_02795 PF02142 MGS-like domain JSQ78_02805 PF01053 Cys/Met metabolism PLP-dependent enzyme JSQ78_02835 PF01850 PIN domain JSQ78_02875 PF12850 Calcineurin-like phosphoesterase superfamily domain JSQ78_02880 PF00069 Protein kinase domain JSQ78_02930 PF06965 Na+/H+ antiporter 1 JSQ78_02930 PF13462 Thioredoxin JSQ78_02940 PF16485 Protealysin propeptide JSQ78_02940 PF01447 Thermolysin metallopeptidase, catalytic domain JSQ78_02940 PF02868 Thermolysin metallopeptidase, alpha-helical domain JSQ78_02945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JSQ78_02945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JSQ78_02945 PF00205 Thiamine pyrophosphate enzyme, central domain JSQ78_02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JSQ78_02955 PF03466 LysR substrate binding domain JSQ78_02965 PF05524 PEP-utilising enzyme, N-terminal JSQ78_02965 PF03610 PTS system fructose IIA component JSQ78_02965 PF00391 PEP-utilising enzyme, mobile domain JSQ78_02965 PF00381 PTS HPr component phosphorylation site JSQ78_02970 PF02734 DAK2 domain JSQ78_02975 PF02733 Dak1 domain JSQ78_02980 PF00230 Major intrinsic protein JSQ78_02985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JSQ78_02985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JSQ78_02995 PF02885 Glycosyl transferase family, helical bundle domain JSQ78_02995 PF00591 Glycosyl transferase family, a/b domain JSQ78_03000 PF00510 Cytochrome c oxidase subunit III JSQ78_03005 PF00034 Cytochrome c JSQ78_03005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JSQ78_03010 PF00355 Rieske [2Fe-2S] domain JSQ78_03015 PF13631 Cytochrome b(N-terminal)/b6/petB JSQ78_03025 PF01636 Phosphotransferase enzyme family JSQ78_03065 PF00892 EamA-like transporter family JSQ78_03080 PF02028 BCCT, betaine/carnitine/choline family transporter JSQ78_03085 PF00155 Aminotransferase class I and II JSQ78_03090 PF01053 Cys/Met metabolism PLP-dependent enzyme JSQ78_03095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JSQ78_03100 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_03105 PF12911 N-terminal TM domain of oligopeptide transport permease C JSQ78_03105 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_03110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JSQ78_03110 PF00005 ABC transporter JSQ78_03115 PF00296 Luciferase-like monooxygenase JSQ78_03140 PF03109 ABC1 family JSQ78_03145 PF03551 Transcriptional regulator PadR-like family JSQ78_03150 PF00474 Sodium:solute symporter family JSQ78_03160 PF03358 NADPH-dependent FMN reductase JSQ78_03170 PF01209 ubiE/COQ5 methyltransferase family JSQ78_03185 PF00128 Alpha amylase, catalytic domain JSQ78_03185 PF02903 Alpha amylase, N-terminal ig-like domain JSQ78_03185 PF16657 Maltogenic Amylase, C-terminal domain JSQ78_03190 PF00107 Zinc-binding dehydrogenase JSQ78_03190 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_03205 PF01047 MarR family JSQ78_03225 PF00561 alpha/beta hydrolase fold JSQ78_03230 PF00005 ABC transporter JSQ78_03230 PF17912 MalK OB fold domain JSQ78_03240 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_03245 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_03265 PF00004 ATPase family associated with various cellular activities (AAA) JSQ78_03300 PF03328 HpcH/HpaI aldolase/citrate lyase family JSQ78_03310 PF00364 Biotin-requiring enzyme JSQ78_03310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ78_03310 PF02785 Biotin carboxylase C-terminal domain JSQ78_03310 PF00289 Biotin carboxylase, N-terminal domain JSQ78_03315 PF01039 Carboxyl transferase domain JSQ78_03320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ78_03320 PF00364 Biotin-requiring enzyme JSQ78_03320 PF02817 e3 binding domain JSQ78_03325 PF02779 Transketolase, pyrimidine binding domain JSQ78_03325 PF02780 Transketolase, C-terminal domain JSQ78_03330 PF00676 Dehydrogenase E1 component JSQ78_03345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JSQ78_03355 PF01593 Flavin containing amine oxidoreductase JSQ78_03365 PF04371 Porphyromonas-type peptidyl-arginine deiminase JSQ78_03370 PF01425 Amidase JSQ78_03385 PF01467 Cytidylyltransferase-like JSQ78_03395 PF00171 Aldehyde dehydrogenase family JSQ78_03400 PF00696 Amino acid kinase family JSQ78_03405 PF01926 50S ribosome-binding GTPase JSQ78_03405 PF01018 GTP1/OBG JSQ78_03405 PF09269 Domain of unknown function (DUF1967) JSQ78_03410 PF01016 Ribosomal L27 protein JSQ78_03415 PF00829 Ribosomal prokaryotic L21 protein JSQ78_03425 PF10150 Ribonuclease E/G family JSQ78_03430 PF01810 LysE type translocator JSQ78_03440 PF00334 Nucleoside diphosphate kinase JSQ78_03450 PF02875 Mur ligase family, glutamate ligase domain JSQ78_03450 PF08245 Mur ligase middle domain JSQ78_03455 PF00133 tRNA synthetases class I (I, L, M and V) JSQ78_03455 PF08264 Anticodon-binding domain of tRNA JSQ78_03465 PF00196 Bacterial regulatory proteins, luxR family JSQ78_03465 PF00072 Response regulator receiver domain JSQ78_03490 PF17754 MftR C-terminal domain JSQ78_03490 PF00440 Bacterial regulatory proteins, tetR family JSQ78_03495 PF00083 Sugar (and other) transporter JSQ78_03495 PF07690 Major Facilitator Superfamily JSQ78_03505 PF00183 Hsp90 protein JSQ78_03510 PF01205 Uncharacterized protein family UPF0029 JSQ78_03510 PF09186 Domain of unknown function (DUF1949) JSQ78_03530 PF08264 Anticodon-binding domain of tRNA JSQ78_03530 PF00133 tRNA synthetases class I (I, L, M and V) JSQ78_03550 PF01432 Peptidase family M3 JSQ78_03560 PF01032 FecCD transport family JSQ78_03565 PF01497 Periplasmic binding protein JSQ78_03570 PF00005 ABC transporter JSQ78_03575 PF07724 AAA domain (Cdc48 subfamily) JSQ78_03575 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ78_03575 PF06689 ClpX C4-type zinc finger JSQ78_03585 PF00574 Clp protease JSQ78_03590 PF00574 Clp protease JSQ78_03595 PF05697 Bacterial trigger factor protein (TF) JSQ78_03595 PF05698 Bacterial trigger factor protein (TF) C-terminus JSQ78_03595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JSQ78_03600 PF04545 Sigma-70, region 4 JSQ78_03600 PF04542 Sigma-70 region 2 JSQ78_03605 PF10099 Anti-sigma-K factor rskA JSQ78_03620 PF03737 Aldolase/RraA JSQ78_03625 PF02567 Phenazine biosynthesis-like protein JSQ78_03655 PF00232 Glycosyl hydrolase family 1 JSQ78_03675 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JSQ78_03675 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JSQ78_03675 PF06827 Zinc finger found in FPG and IleRS JSQ78_03680 PF02502 Ribose/Galactose Isomerase JSQ78_03685 PF01323 DSBA-like thioredoxin domain JSQ78_03690 PF01433 Peptidase family M1 domain JSQ78_03690 PF11838 ERAP1-like C-terminal domain JSQ78_03700 PF01152 Bacterial-like globin JSQ78_03705 PF00890 FAD binding domain JSQ78_03715 PF00115 Cytochrome C and Quinol oxidase polypeptide I JSQ78_03720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JSQ78_03725 PF01521 Iron-sulphur cluster biosynthesis JSQ78_03730 PF01546 Peptidase family M20/M25/M40 JSQ78_03730 PF07687 Peptidase dimerisation domain JSQ78_03735 PF11241 Protein of unknown function (DUF3043) JSQ78_03740 PF01180 Dihydroorotate dehydrogenase JSQ78_03745 PF03477 ATP cone domain JSQ78_03750 PF00815 Histidinol dehydrogenase JSQ78_03755 PF02811 PHP domain JSQ78_03755 PF14579 Helix-hairpin-helix motif JSQ78_03755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JSQ78_03755 PF07733 Bacterial DNA polymerase III alpha NTPase domain JSQ78_03760 PF00849 RNA pseudouridylate synthase JSQ78_03765 PF01252 Signal peptidase (SPase) II JSQ78_03780 PF04472 Cell division protein SepF JSQ78_03785 PF01168 Alanine racemase, N-terminal domain JSQ78_03800 PF08245 Mur ligase middle domain JSQ78_03800 PF02875 Mur ligase family, glutamate ligase domain JSQ78_03800 PF01225 Mur ligase family, catalytic domain JSQ78_03805 PF04101 Glycosyltransferase family 28 C-terminal domain JSQ78_03805 PF03033 Glycosyltransferase family 28 N-terminal domain JSQ78_03810 PF01098 Cell cycle protein JSQ78_03815 PF02875 Mur ligase family, glutamate ligase domain JSQ78_03815 PF08245 Mur ligase middle domain JSQ78_03820 PF00953 Glycosyl transferase family 4 JSQ78_03825 PF01225 Mur ligase family, catalytic domain JSQ78_03825 PF02875 Mur ligase family, glutamate ligase domain JSQ78_03825 PF08245 Mur ligase middle domain JSQ78_03830 PF01225 Mur ligase family, catalytic domain JSQ78_03830 PF02875 Mur ligase family, glutamate ligase domain JSQ78_03830 PF08245 Mur ligase middle domain JSQ78_03835 PF03717 Penicillin-binding Protein dimerisation domain JSQ78_03835 PF00905 Penicillin binding protein transpeptidase domain JSQ78_03845 PF01795 MraW methylase family JSQ78_03850 PF02381 MraZ protein, putative antitoxin-like JSQ78_03860 PF00348 Polyprenyl synthetase JSQ78_03870 PF00069 Protein kinase domain JSQ78_03870 PF03793 PASTA domain JSQ78_03875 PF01474 Class-II DAHP synthetase family JSQ78_03880 PF01553 Acyltransferase JSQ78_03885 PF00501 AMP-binding enzyme JSQ78_03890 PF01327 Polypeptide deformylase JSQ78_03895 PF02785 Biotin carboxylase C-terminal domain JSQ78_03895 PF00289 Biotin carboxylase, N-terminal domain JSQ78_03895 PF00364 Biotin-requiring enzyme JSQ78_03895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ78_03895 PF00682 HMGL-like JSQ78_03895 PF02436 Conserved carboxylase domain JSQ78_03900 PF13614 AAA domain JSQ78_03905 PF13411 MerR HTH family regulatory protein JSQ78_03910 PF00376 MerR family regulatory protein JSQ78_03930 PF03352 Methyladenine glycosylase JSQ78_03930 PF00958 GMP synthase C terminal domain JSQ78_03930 PF13302 Acetyltransferase (GNAT) domain JSQ78_03930 PF13673 Acetyltransferase (GNAT) domain JSQ78_03930 PF00117 Glutamine amidotransferase class-I JSQ78_03935 PF00958 GMP synthase C terminal domain JSQ78_03935 PF02540 NAD synthase JSQ78_03935 PF00117 Glutamine amidotransferase class-I JSQ78_03940 PF02595 Glycerate kinase family JSQ78_03945 PF00296 Luciferase-like monooxygenase JSQ78_03950 PF00108 Thiolase, N-terminal domain JSQ78_03950 PF02803 Thiolase, C-terminal domain JSQ78_03960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JSQ78_03965 PF01053 Cys/Met metabolism PLP-dependent enzyme JSQ78_03985 PF00266 Aminotransferase class-V JSQ78_04000 PF03176 MMPL family JSQ78_04010 PF01370 NAD dependent epimerase/dehydratase family JSQ78_04015 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_04015 PF00107 Zinc-binding dehydrogenase JSQ78_04020 PF00248 Aldo/keto reductase family JSQ78_04045 PF01266 FAD dependent oxidoreductase JSQ78_04050 PF01527 Transposase JSQ78_04085 PF03814 Potassium-transporting ATPase A subunit JSQ78_04095 PF02669 K+-transporting ATPase, c chain JSQ78_04100 PF13493 Domain of unknown function (DUF4118) JSQ78_04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_04100 PF02702 Osmosensitive K+ channel His kinase sensor domain JSQ78_04105 PF00072 Response regulator receiver domain JSQ78_04105 PF00486 Transcriptional regulatory protein, C terminal JSQ78_04120 PF02899 Phage integrase, N-terminal SAM-like domain JSQ78_04120 PF00589 Phage integrase family JSQ78_04145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JSQ78_04145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JSQ78_04150 PF08021 Siderophore-interacting FAD-binding domain JSQ78_04150 PF04954 Siderophore-interacting protein JSQ78_04155 PF07690 Major Facilitator Superfamily JSQ78_04160 PF08543 Phosphomethylpyrimidine kinase JSQ78_04165 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JSQ78_04165 PF01926 50S ribosome-binding GTPase JSQ78_04170 PF02224 Cytidylate kinase JSQ78_04175 PF02153 Prephenate dehydrogenase JSQ78_04180 PF01479 S4 domain JSQ78_04180 PF00849 RNA pseudouridylate synthase JSQ78_04185 PF04079 Segregation and condensation complex subunit ScpB JSQ78_04190 PF02616 Segregation and condensation protein ScpA JSQ78_04195 PF13614 AAA domain JSQ78_04205 PF02899 Phage integrase, N-terminal SAM-like domain JSQ78_04205 PF00589 Phage integrase family JSQ78_04210 PF00293 NUDIX domain JSQ78_04215 PF06418 CTP synthase N-terminus JSQ78_04215 PF00117 Glutamine amidotransferase class-I JSQ78_04220 PF02463 RecF/RecN/SMC N terminal domain JSQ78_04225 PF01513 ATP-NAD kinase JSQ78_04230 PF01479 S4 domain JSQ78_04230 PF01728 FtsJ-like methyltransferase JSQ78_04245 PF00753 Metallo-beta-lactamase superfamily JSQ78_04250 PF13419 Haloacid dehalogenase-like hydrolase JSQ78_04280 PF00579 tRNA synthetases class I (W and Y) JSQ78_04285 PF14698 Argininosuccinate lyase C-terminal JSQ78_04285 PF00206 Lyase JSQ78_04290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JSQ78_04290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JSQ78_04295 PF00696 Amino acid kinase family JSQ78_04300 PF01960 ArgJ family JSQ78_04305 PF01118 Semialdehyde dehydrogenase, NAD binding domain JSQ78_04305 PF02774 Semialdehyde dehydrogenase, dimerisation domain JSQ78_04315 PF03483 B3/4 domain JSQ78_04315 PF03484 tRNA synthetase B5 domain JSQ78_04315 PF01588 Putative tRNA binding domain JSQ78_04315 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JSQ78_04315 PF03147 Ferredoxin-fold anticodon binding domain JSQ78_04320 PF01409 tRNA synthetases class II core domain (F) JSQ78_04320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JSQ78_04325 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_04330 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_04335 PF00497 Bacterial extracellular solute-binding proteins, family 3 JSQ78_04340 PF00005 ABC transporter JSQ78_04345 PF00588 SpoU rRNA Methylase family JSQ78_04345 PF08032 RNA 2'-O ribose methyltransferase substrate binding JSQ78_04350 PF00453 Ribosomal protein L20 JSQ78_04355 PF01632 Ribosomal protein L35 JSQ78_04360 PF00707 Translation initiation factor IF-3, C-terminal domain JSQ78_04360 PF05198 Translation initiation factor IF-3, N-terminal domain JSQ78_04375 PF00977 Histidine biosynthesis protein JSQ78_04380 PF00117 Glutamine amidotransferase class-I JSQ78_04385 PF00475 Imidazoleglycerol-phosphate dehydratase JSQ78_04390 PF00155 Aminotransferase class I and II JSQ78_04400 PF01726 LexA DNA binding domain JSQ78_04400 PF00717 Peptidase S24-like JSQ78_04405 PF16360 GTP-binding GTPase Middle Region JSQ78_04405 PF13167 GTP-binding GTPase N-terminal JSQ78_04405 PF01926 50S ribosome-binding GTPase JSQ78_04410 PF05175 Methyltransferase small domain JSQ78_04410 PF08468 Methyltransferase small domain N-terminal JSQ78_04415 PF01678 Diaminopimelate epimerase JSQ78_04425 PF04055 Radical SAM superfamily JSQ78_04425 PF00919 Uncharacterized protein family UPF0004 JSQ78_04435 PF02631 RecX family JSQ78_04440 PF00154 recA bacterial DNA recombination protein JSQ78_04455 PF02464 Competence-damaged protein JSQ78_04455 PF00994 Probable molybdopterin binding domain JSQ78_04460 PF01066 CDP-alcohol phosphatidyltransferase JSQ78_04465 PF17854 FtsK alpha domain JSQ78_04465 PF09397 Ftsk gamma domain JSQ78_04465 PF01580 FtsK/SpoIIIE family JSQ78_04470 PF00005 ABC transporter JSQ78_04470 PF02687 FtsX-like permease family JSQ78_04470 PF12704 MacB-like periplasmic core domain JSQ78_04475 PF00005 ABC transporter JSQ78_04475 PF12704 MacB-like periplasmic core domain JSQ78_04500 PF17770 Ribonuclease J C-terminal domain JSQ78_04500 PF12706 Beta-lactamase superfamily domain JSQ78_04500 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JSQ78_04505 PF00701 Dihydrodipicolinate synthetase family JSQ78_04510 PF00186 Dihydrofolate reductase JSQ78_04515 PF00303 Thymidylate synthase JSQ78_04525 PF05173 Dihydrodipicolinate reductase, C-terminus JSQ78_04525 PF01113 Dihydrodipicolinate reductase, N-terminus JSQ78_04535 PF00300 Histidine phosphatase superfamily (branch 1) JSQ78_04540 PF05193 Peptidase M16 inactive domain JSQ78_04540 PF00675 Insulinase (Peptidase family M16) JSQ78_04545 PF00013 KH domain JSQ78_04545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JSQ78_04545 PF01138 3' exoribonuclease family, domain 1 JSQ78_04545 PF00575 S1 RNA binding domain JSQ78_04550 PF00312 Ribosomal protein S15 JSQ78_04560 PF10415 Fumarase C C-terminus JSQ78_04560 PF00206 Lyase JSQ78_04570 PF00266 Aminotransferase class-V JSQ78_04580 PF03301 Tryptophan 2,3-dioxygenase JSQ78_04585 PF05175 Methyltransferase small domain JSQ78_04590 PF01546 Peptidase family M20/M25/M40 JSQ78_04590 PF07687 Peptidase dimerisation domain JSQ78_04605 PF01545 Cation efflux family JSQ78_04610 PF00171 Aldehyde dehydrogenase family JSQ78_04615 PF00171 Aldehyde dehydrogenase family JSQ78_04620 PF01791 DeoC/LacD family aldolase JSQ78_04625 PF06574 FAD synthetase JSQ78_04625 PF01687 Riboflavin kinase JSQ78_04640 PF09142 tRNA Pseudouridine synthase II, C terminal JSQ78_04640 PF16198 tRNA pseudouridylate synthase B C-terminal domain JSQ78_04640 PF01509 TruB family pseudouridylate synthase (N terminal domain) JSQ78_04645 PF08546 Ketopantoate reductase PanE/ApbA C terminal JSQ78_04645 PF02558 Ketopantoate reductase PanE/ApbA JSQ78_04660 PF00730 HhH-GPD superfamily base excision DNA repair protein JSQ78_04660 PF00633 Helix-hairpin-helix motif JSQ78_04665 PF08206 Ribonuclease B OB domain JSQ78_04665 PF00773 RNB domain JSQ78_04670 PF02033 Ribosome-binding factor A JSQ78_04675 PF00009 Elongation factor Tu GTP binding domain JSQ78_04675 PF11987 Translation-initiation factor 2 JSQ78_04675 PF04760 Translation initiation factor IF-2, N-terminal region JSQ78_04685 PF13184 NusA-like KH domain JSQ78_04685 PF08529 NusA N-terminal domain JSQ78_04690 PF01235 Sodium:alanine symporter family JSQ78_04695 PF03129 Anticodon binding domain JSQ78_04695 PF04073 Aminoacyl-tRNA editing domain JSQ78_04695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ78_04720 PF01882 Protein of unknown function DUF58 JSQ78_04725 PF07726 ATPase family associated with various cellular activities (AAA) JSQ78_04725 PF17863 AAA lid domain JSQ78_04730 PF07690 Major Facilitator Superfamily JSQ78_04735 PF04551 GcpE protein JSQ78_04740 PF00075 RNase H JSQ78_04745 PF17820 PDZ domain JSQ78_04745 PF02163 Peptidase family M50 JSQ78_04760 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JSQ78_04760 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JSQ78_04760 PF13288 DXP reductoisomerase C-terminal domain JSQ78_04770 PF00202 Aminotransferase class-III JSQ78_04775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JSQ78_04775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JSQ78_04780 PF01580 FtsK/SpoIIIE family JSQ78_04780 PF12538 DNA transporter JSQ78_04795 PF17863 AAA lid domain JSQ78_04795 PF07726 ATPase family associated with various cellular activities (AAA) JSQ78_04805 PF03793 PASTA domain JSQ78_04805 PF00069 Protein kinase domain JSQ78_04835 PF00248 Aldo/keto reductase family JSQ78_04840 PF04993 TfoX N-terminal domain JSQ78_04845 PF00270 DEAD/DEAH box helicase JSQ78_04845 PF00271 Helicase conserved C-terminal domain JSQ78_04845 PF00570 HRDC domain JSQ78_04845 PF16124 RecQ zinc-binding JSQ78_04845 PF09382 RQC domain JSQ78_04865 PF03883 Peroxide stress protein YaaA JSQ78_04870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JSQ78_04875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ78_04875 PF02874 ATP synthase alpha/beta family, beta-barrel domain JSQ78_04880 PF00231 ATP synthase JSQ78_04885 PF00306 ATP synthase alpha/beta chain, C terminal domain JSQ78_04885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ78_04885 PF02874 ATP synthase alpha/beta family, beta-barrel domain JSQ78_04890 PF00213 ATP synthase delta (OSCP) subunit JSQ78_04895 PF00430 ATP synthase B/B' CF(0) JSQ78_04900 PF00137 ATP synthase subunit C JSQ78_04905 PF00119 ATP synthase A chain JSQ78_04915 PF00953 Glycosyl transferase family 4 JSQ78_04920 PF01300 Telomere recombination JSQ78_04925 PF05175 Methyltransferase small domain JSQ78_04925 PF17827 PrmC N-terminal domain JSQ78_04930 PF00291 Pyridoxal-phosphate dependent enzyme JSQ78_04935 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ78_04940 PF00893 Small Multidrug Resistance protein JSQ78_04945 PF00893 Small Multidrug Resistance protein JSQ78_04970 PF03462 PCRF domain JSQ78_04970 PF00472 RF-1 domain JSQ78_04975 PF07497 Rho termination factor, RNA-binding domain JSQ78_04975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JSQ78_04975 PF07498 Rho termination factor, N-terminal domain JSQ78_04980 PF00288 GHMP kinases N terminal domain JSQ78_04985 PF00291 Pyridoxal-phosphate dependent enzyme JSQ78_04990 PF03447 Homoserine dehydrogenase, NAD binding domain JSQ78_04990 PF01842 ACT domain JSQ78_04990 PF00742 Homoserine dehydrogenase JSQ78_04995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JSQ78_04995 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JSQ78_05000 PF02245 Methylpurine-DNA glycosylase (MPG) JSQ78_05005 PF03485 Arginyl tRNA synthetase N terminal domain JSQ78_05005 PF05746 DALR anticodon binding domain JSQ78_05005 PF00750 tRNA synthetases class I (R) JSQ78_05035 PF06750 Bacterial Peptidase A24 N-terminal domain JSQ78_05035 PF01478 Type IV leader peptidase family JSQ78_05055 PF07963 Prokaryotic N-terminal methylation motif JSQ78_05055 PF14245 Type IV pilin PilA JSQ78_05060 PF00482 Type II secretion system (T2SS), protein F JSQ78_05065 PF00437 Type II/IV secretion system protein JSQ78_05070 PF00437 Type II/IV secretion system protein JSQ78_05070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JSQ78_05090 PF02583 Metal-sensitive transcriptional repressor JSQ78_05100 PF00403 Heavy-metal-associated domain JSQ78_05105 PF00561 alpha/beta hydrolase fold JSQ78_05115 PF07495 Y_Y_Y domain JSQ78_05115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_05115 PF07494 Two component regulator propeller JSQ78_05115 PF00072 Response regulator receiver domain JSQ78_05115 PF12833 Helix-turn-helix domain JSQ78_05115 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_05130 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JSQ78_05130 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JSQ78_05145 PF08281 Sigma-70, region 4 JSQ78_05145 PF04542 Sigma-70 region 2 JSQ78_05155 PF04536 TPM domain JSQ78_05160 PF04012 PspA/IM30 family JSQ78_05165 PF13439 Glycosyltransferase Family 4 JSQ78_05165 PF00534 Glycosyl transferases group 1 JSQ78_05175 PF01425 Amidase JSQ78_05190 PF03167 Uracil DNA glycosylase superfamily JSQ78_05200 PF00202 Aminotransferase class-III JSQ78_05215 PF01032 FecCD transport family JSQ78_05220 PF00005 ABC transporter JSQ78_05225 PF01933 Uncharacterised protein family UPF0052 JSQ78_05230 PF01983 Guanylyl transferase CofC like JSQ78_05245 PF17863 AAA lid domain JSQ78_05245 PF07726 ATPase family associated with various cellular activities (AAA) JSQ78_05250 PF01996 F420-0:Gamma-glutamyl ligase JSQ78_05250 PF00881 Nitroreductase family JSQ78_05255 PF01467 Cytidylyltransferase-like JSQ78_05260 PF00270 DEAD/DEAH box helicase JSQ78_05260 PF00271 Helicase conserved C-terminal domain JSQ78_05260 PF17191 RecG wedge domain JSQ78_05270 PF00586 AIR synthase related protein, N-terminal domain JSQ78_05270 PF02769 AIR synthase related protein, C-terminal domain JSQ78_05290 PF01541 GIY-YIG catalytic domain JSQ78_05290 PF00929 Exonuclease JSQ78_05295 PF00005 ABC transporter JSQ78_05295 PF00571 CBS domain JSQ78_05300 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_05325 PF00561 alpha/beta hydrolase fold JSQ78_05330 PF01144 Coenzyme A transferase JSQ78_05335 PF01144 Coenzyme A transferase JSQ78_05355 PF00501 AMP-binding enzyme JSQ78_05355 PF13193 AMP-binding enzyme C-terminal domain JSQ78_05370 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JSQ78_05380 PF01116 Fructose-bisphosphate aldolase class-II JSQ78_05395 PF02401 LytB protein JSQ78_05400 PF02601 Exonuclease VII, large subunit JSQ78_05400 PF13742 OB-fold nucleic acid binding domain JSQ78_05405 PF07690 Major Facilitator Superfamily JSQ78_05410 PF01546 Peptidase family M20/M25/M40 JSQ78_05410 PF07687 Peptidase dimerisation domain JSQ78_05415 PF02609 Exonuclease VII small subunit JSQ78_05425 PF10415 Fumarase C C-terminus JSQ78_05425 PF00206 Lyase JSQ78_05435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JSQ78_05435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JSQ78_05435 PF00205 Thiamine pyrophosphate enzyme, central domain JSQ78_05440 PF07969 Amidohydrolase family JSQ78_05445 PF00083 Sugar (and other) transporter JSQ78_05445 PF07690 Major Facilitator Superfamily JSQ78_05450 PF01037 Lrp/AsnC ligand binding domain JSQ78_05455 PF00326 Prolyl oligopeptidase family JSQ78_05455 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JSQ78_05465 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_05470 PF00005 ABC transporter JSQ78_05470 PF09383 NIL domain JSQ78_05475 PF03180 NLPA lipoprotein JSQ78_05510 PF13638 PIN domain JSQ78_05510 PF02562 PhoH-like protein JSQ78_05515 PF01255 Putative undecaprenyl diphosphate synthase JSQ78_05530 PF07516 SecA Wing and Scaffold domain JSQ78_05530 PF07517 SecA DEAD-like domain JSQ78_05530 PF01043 SecA preprotein cross-linking domain JSQ78_05535 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JSQ78_05535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JSQ78_05545 PF10647 Lipoprotein LpqB beta-propeller domain JSQ78_05545 PF10646 Sporulation and spore germination JSQ78_05550 PF00672 HAMP domain JSQ78_05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_05550 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_05555 PF00072 Response regulator receiver domain JSQ78_05555 PF00486 Transcriptional regulatory protein, C terminal JSQ78_05560 PF02554 Carbon starvation protein CstA JSQ78_05560 PF13722 5TM C-terminal transporter carbon starvation CstA JSQ78_05570 PF02374 Anion-transporting ATPase JSQ78_05575 PF12848 ABC transporter JSQ78_05575 PF16326 ABC transporter C-terminal domain JSQ78_05575 PF00005 ABC transporter JSQ78_05580 PF08544 GHMP kinases C terminal JSQ78_05580 PF00288 GHMP kinases N terminal domain JSQ78_05590 PF00398 Ribosomal RNA adenine dimethylase JSQ78_05600 PF01026 TatD related DNase JSQ78_05615 PF08264 Anticodon-binding domain of tRNA JSQ78_05615 PF09334 tRNA synthetases class I (M) JSQ78_05620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JSQ78_05625 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JSQ78_05625 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase JSQ78_05630 PF03190 Protein of unknown function, DUF255 JSQ78_05645 PF00248 Aldo/keto reductase family JSQ78_05650 PF00285 Citrate synthase, C-terminal domain JSQ78_05670 PF02770 Acyl-CoA dehydrogenase, middle domain JSQ78_05670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JSQ78_05670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JSQ78_05680 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JSQ78_05685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JSQ78_05695 PF03972 MmgE/PrpD family JSQ78_05700 PF01970 Tripartite tricarboxylate transporter TctA family JSQ78_05715 PF00392 Bacterial regulatory proteins, gntR family JSQ78_05715 PF07729 FCD domain JSQ78_05725 PF04851 Type III restriction enzyme, res subunit JSQ78_05740 PF07883 Cupin domain JSQ78_05750 PF00270 DEAD/DEAH box helicase JSQ78_05750 PF11898 Domain of unknown function (DUF3418) JSQ78_05750 PF04408 Helicase associated domain (HA2) JSQ78_05750 PF00271 Helicase conserved C-terminal domain JSQ78_05750 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JSQ78_05785 PF00248 Aldo/keto reductase family JSQ78_05815 PF02661 Fic/DOC family JSQ78_05815 PF17841 BID domain of Bartonella effector protein (Bep) JSQ78_05825 PF01636 Phosphotransferase enzyme family JSQ78_05825 PF18085 Maltokinase N-terminal cap domain JSQ78_05835 PF00483 Nucleotidyl transferase JSQ78_05845 PF18085 Maltokinase N-terminal cap domain JSQ78_05850 PF01451 Low molecular weight phosphotyrosine protein phosphatase JSQ78_05855 PF16363 GDP-mannose 4,6 dehydratase JSQ78_05870 PF03358 NADPH-dependent FMN reductase JSQ78_05880 PF07690 Major Facilitator Superfamily JSQ78_05895 PF00664 ABC transporter transmembrane region JSQ78_05895 PF00005 ABC transporter JSQ78_05910 PF01435 Peptidase family M48 JSQ78_05920 PF01654 Cytochrome bd terminal oxidase subunit I JSQ78_05925 PF02322 Cytochrome bd terminal oxidase subunit II JSQ78_05985 PF01741 Large-conductance mechanosensitive channel, MscL JSQ78_06000 PF01551 Peptidase family M23 JSQ78_06000 PF01464 Transglycosylase SLT domain JSQ78_06000 PF10145 Phage-related minor tail protein JSQ78_06005 PF00005 ABC transporter JSQ78_06030 PF02583 Metal-sensitive transcriptional repressor JSQ78_06045 PF00403 Heavy-metal-associated domain JSQ78_06060 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_06060 PF14759 Reductase C-terminal JSQ78_06075 PF00005 ABC transporter JSQ78_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JSQ78_06085 PF01476 LysM domain JSQ78_06085 PF08525 Opacity-associated protein A N-terminal motif JSQ78_06085 PF01551 Peptidase family M23 JSQ78_06110 PF00085 Thioredoxin JSQ78_06115 PF02683 Cytochrome C biogenesis protein transmembrane region JSQ78_06120 PF05140 ResB-like family JSQ78_06125 PF01578 Cytochrome C assembly protein JSQ78_06150 PF00877 NlpC/P60 family JSQ78_06155 PF01325 Iron dependent repressor, N-terminal DNA binding domain JSQ78_06155 PF02742 Iron dependent repressor, metal binding and dimerisation domain JSQ78_06155 PF18357 Diphteria toxin repressor SH3 domain JSQ78_06160 PF00266 Aminotransferase class-V JSQ78_06170 PF00313 'Cold-shock' DNA-binding domain JSQ78_06185 PF04851 Type III restriction enzyme, res subunit JSQ78_06185 PF00271 Helicase conserved C-terminal domain JSQ78_06190 PF00072 Response regulator receiver domain JSQ78_06190 PF00486 Transcriptional regulatory protein, C terminal JSQ78_06195 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_06195 PF00672 HAMP domain JSQ78_06205 PF00118 TCP-1/cpn60 chaperonin family JSQ78_06220 PF01641 SelR domain JSQ78_06255 PF17912 MalK OB fold domain JSQ78_06255 PF00005 ABC transporter JSQ78_06265 PF00588 SpoU rRNA Methylase family JSQ78_06265 PF08032 RNA 2'-O ribose methyltransferase substrate binding JSQ78_06270 PF09190 DALR domain JSQ78_06270 PF01406 tRNA synthetases class I (C) catalytic domain JSQ78_06275 PF02542 YgbB family JSQ78_06275 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JSQ78_06280 PF02559 CarD-like/TRCF domain JSQ78_06290 PF00072 Response regulator receiver domain JSQ78_06290 PF00486 Transcriptional regulatory protein, C terminal JSQ78_06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_06295 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_06300 PF01895 PhoU domain JSQ78_06305 PF00300 Histidine phosphatase superfamily (branch 1) JSQ78_06320 PF01571 Aminomethyltransferase folate-binding domain JSQ78_06325 PF08768 Domain of unknown function (DUF1794) JSQ78_06335 PF00486 Transcriptional regulatory protein, C terminal JSQ78_06340 PF00583 Acetyltransferase (GNAT) family JSQ78_06345 PF02503 Polyphosphate kinase middle domain JSQ78_06345 PF13090 Polyphosphate kinase C-terminal domain 2 JSQ78_06345 PF17941 Polyphosphate kinase C-terminal domain 1 JSQ78_06345 PF13089 Polyphosphate kinase N-terminal domain JSQ78_06350 PF00300 Histidine phosphatase superfamily (branch 1) JSQ78_06350 PF00293 NUDIX domain JSQ78_06355 PF00005 ABC transporter JSQ78_06360 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_06365 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_06370 PF12849 PBP superfamily domain JSQ78_06405 PF03180 NLPA lipoprotein JSQ78_06410 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_06415 PF00005 ABC transporter JSQ78_06415 PF09383 NIL domain JSQ78_06425 PF01263 Aldose 1-epimerase JSQ78_06435 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_06440 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_06450 PF13439 Glycosyltransferase Family 4 JSQ78_06450 PF00534 Glycosyl transferases group 1 JSQ78_06475 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ78_06485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JSQ78_06485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JSQ78_06490 PF00464 Serine hydroxymethyltransferase JSQ78_06505 PF00171 Aldehyde dehydrogenase family JSQ78_06515 PF07690 Major Facilitator Superfamily JSQ78_06530 PF00551 Formyl transferase JSQ78_06535 PF01520 N-acetylmuramoyl-L-alanine amidase JSQ78_06535 PF04122 Putative cell wall binding repeat 2 JSQ78_06540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JSQ78_06540 PF07733 Bacterial DNA polymerase III alpha NTPase domain JSQ78_06540 PF14579 Helix-hairpin-helix motif JSQ78_06540 PF02811 PHP domain JSQ78_06550 PF00817 impB/mucB/samB family JSQ78_06550 PF11799 impB/mucB/samB family C-terminal domain JSQ78_06550 PF11798 IMS family HHH motif JSQ78_06565 PF00294 pfkB family carbohydrate kinase JSQ78_06575 PF00686 Starch binding domain JSQ78_06575 PF00128 Alpha amylase, catalytic domain JSQ78_06575 PF02806 Alpha amylase, C-terminal all-beta domain JSQ78_06580 PF00664 ABC transporter transmembrane region JSQ78_06580 PF00005 ABC transporter JSQ78_06585 PF00664 ABC transporter transmembrane region JSQ78_06585 PF00005 ABC transporter JSQ78_06595 PF02142 MGS-like domain JSQ78_06595 PF01808 AICARFT/IMPCHase bienzyme JSQ78_06600 PF00551 Formyl transferase JSQ78_06610 PF03971 Monomeric isocitrate dehydrogenase JSQ78_06625 PF02629 CoA binding domain JSQ78_06625 PF00549 CoA-ligase JSQ78_06630 PF08442 ATP-grasp domain JSQ78_06630 PF00549 CoA-ligase JSQ78_06660 PF13361 UvrD-like helicase C-terminal domain JSQ78_06660 PF00580 UvrD/REP helicase N-terminal domain JSQ78_06670 PF03009 Glycerophosphoryl diester phosphodiesterase family JSQ78_06690 PF01758 Sodium Bile acid symporter family JSQ78_06695 PF01592 NifU-like N terminal domain JSQ78_06700 PF00266 Aminotransferase class-V JSQ78_06710 PF00117 Glutamine amidotransferase class-I JSQ78_06710 PF02540 NAD synthase JSQ78_06710 PF00958 GMP synthase C terminal domain JSQ78_06715 PF12823 Domain of unknown function (DUF3817) JSQ78_06725 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JSQ78_06725 PF01266 FAD dependent oxidoreductase JSQ78_06730 PF00478 IMP dehydrogenase / GMP reductase domain JSQ78_06750 PF00478 IMP dehydrogenase / GMP reductase domain JSQ78_06750 PF00571 CBS domain JSQ78_06755 PF02653 Branched-chain amino acid transport system / permease component JSQ78_06760 PF02653 Branched-chain amino acid transport system / permease component JSQ78_06760 PF11862 Domain of unknown function (DUF3382) JSQ78_06765 PF00005 ABC transporter JSQ78_06765 PF12399 Branched-chain amino acid ATP-binding cassette transporter JSQ78_06770 PF00005 ABC transporter JSQ78_06780 PF00892 EamA-like transporter family JSQ78_06785 PF00166 Chaperonin 10 Kd subunit JSQ78_06810 PF00814 Glycoprotease family JSQ78_06820 PF00814 Glycoprotease family JSQ78_06825 PF01168 Alanine racemase, N-terminal domain JSQ78_06825 PF00842 Alanine racemase, C-terminal domain JSQ78_06830 PF01648 4'-phosphopantetheinyl transferase superfamily JSQ78_06835 PF01380 SIS domain JSQ78_06840 PF00485 Phosphoribulokinase / Uridine kinase family JSQ78_06855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JSQ78_06855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JSQ78_06855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JSQ78_06855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JSQ78_06860 PF00380 Ribosomal protein S9/S16 JSQ78_06865 PF00572 Ribosomal protein L13 JSQ78_06875 PF13419 Haloacid dehalogenase-like hydrolase JSQ78_06880 PF01416 tRNA pseudouridine synthase JSQ78_06885 PF00723 Glycosyl hydrolases family 15 JSQ78_06890 PF01196 Ribosomal protein L17 JSQ78_06895 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JSQ78_06895 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JSQ78_06895 PF01000 RNA polymerase Rpb3/RpoA insert domain JSQ78_06900 PF00411 Ribosomal protein S11 JSQ78_06905 PF00416 Ribosomal protein S13/S18 JSQ78_06910 PF00444 Ribosomal protein L36 JSQ78_06915 PF01176 Translation initiation factor 1A / IF-1 JSQ78_06925 PF08125 Mannitol dehydrogenase C-terminal domain JSQ78_06925 PF01232 Mannitol dehydrogenase Rossmann domain JSQ78_06930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JSQ78_06935 PF02378 Phosphotransferase system, EIIC JSQ78_06935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JSQ78_06940 PF00381 PTS HPr component phosphorylation site JSQ78_06950 PF00005 ABC transporter JSQ78_06955 PF00005 ABC transporter JSQ78_07000 PF00557 Metallopeptidase family M24 JSQ78_07010 PF00344 SecY translocase JSQ78_07015 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JSQ78_07020 PF00327 Ribosomal protein L30p/L7e JSQ78_07025 PF03719 Ribosomal protein S5, C-terminal domain JSQ78_07025 PF00333 Ribosomal protein S5, N-terminal domain JSQ78_07030 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JSQ78_07035 PF00347 Ribosomal protein L6 JSQ78_07040 PF00410 Ribosomal protein S8 JSQ78_07045 PF00281 Ribosomal protein L5 JSQ78_07045 PF00673 ribosomal L5P family C-terminus JSQ78_07050 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JSQ78_07055 PF00238 Ribosomal protein L14p/L23e JSQ78_07060 PF00366 Ribosomal protein S17 JSQ78_07065 PF00831 Ribosomal L29 protein JSQ78_07070 PF00252 Ribosomal protein L16p/L10e JSQ78_07075 PF07650 KH domain JSQ78_07075 PF00189 Ribosomal protein S3, C-terminal domain JSQ78_07080 PF00237 Ribosomal protein L22p/L17e JSQ78_07085 PF00203 Ribosomal protein S19 JSQ78_07090 PF03947 Ribosomal Proteins L2, C-terminal domain JSQ78_07090 PF00181 Ribosomal Proteins L2, RNA binding domain JSQ78_07095 PF00276 Ribosomal protein L23 JSQ78_07100 PF00573 Ribosomal protein L4/L1 family JSQ78_07105 PF00297 Ribosomal protein L3 JSQ78_07110 PF00338 Ribosomal protein S10p/S20e JSQ78_07115 PF00491 Arginase family JSQ78_07120 PF01494 FAD binding domain JSQ78_07130 PF00195 Chalcone and stilbene synthases, N-terminal domain JSQ78_07130 PF02797 Chalcone and stilbene synthases, C-terminal domain JSQ78_07135 PF01979 Amidohydrolase family JSQ78_07140 PF17391 Urocanase N-terminal domain JSQ78_07140 PF17392 Urocanase C-terminal domain JSQ78_07140 PF01175 Urocanase Rossmann-like domain JSQ78_07145 PF00221 Aromatic amino acid lyase JSQ78_07190 PF03143 Elongation factor Tu C-terminal domain JSQ78_07190 PF00009 Elongation factor Tu GTP binding domain JSQ78_07190 PF03144 Elongation factor Tu domain 2 JSQ78_07195 PF03144 Elongation factor Tu domain 2 JSQ78_07195 PF00009 Elongation factor Tu GTP binding domain JSQ78_07195 PF00679 Elongation factor G C-terminus JSQ78_07195 PF14492 Elongation Factor G, domain II JSQ78_07195 PF03764 Elongation factor G, domain IV JSQ78_07200 PF00177 Ribosomal protein S7p/S5e JSQ78_07205 PF00164 Ribosomal protein S12/S23 JSQ78_07260 PF01580 FtsK/SpoIIIE family JSQ78_07260 PF12538 DNA transporter JSQ78_07270 PF00069 Protein kinase domain JSQ78_07270 PF03793 PASTA domain JSQ78_07300 PF17863 AAA lid domain JSQ78_07300 PF07726 ATPase family associated with various cellular activities (AAA) JSQ78_07315 PF04997 RNA polymerase Rpb1, domain 1 JSQ78_07315 PF00623 RNA polymerase Rpb1, domain 2 JSQ78_07315 PF04983 RNA polymerase Rpb1, domain 3 JSQ78_07315 PF05000 RNA polymerase Rpb1, domain 4 JSQ78_07315 PF04998 RNA polymerase Rpb1, domain 5 JSQ78_07320 PF04560 RNA polymerase Rpb2, domain 7 JSQ78_07320 PF00562 RNA polymerase Rpb2, domain 6 JSQ78_07320 PF10385 RNA polymerase beta subunit external 1 domain JSQ78_07320 PF04565 RNA polymerase Rpb2, domain 3 JSQ78_07320 PF04561 RNA polymerase Rpb2, domain 2 JSQ78_07320 PF04563 RNA polymerase beta subunit JSQ78_07350 PF00248 Aldo/keto reductase family JSQ78_07395 PF18073 Rubredoxin metal binding domain JSQ78_07405 PF00583 Acetyltransferase (GNAT) family JSQ78_07415 PF00149 Calcineurin-like phosphoesterase JSQ78_07420 PF00004 ATPase family associated with various cellular activities (AAA) JSQ78_07420 PF07724 AAA domain (Cdc48 subfamily) JSQ78_07420 PF17871 AAA lid domain JSQ78_07420 PF02861 Clp amino terminal domain, pathogenicity island component JSQ78_07420 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ78_07430 PF13443 Cro/C1-type HTH DNA-binding domain JSQ78_07445 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain JSQ78_07450 PF03632 Glycosyl hydrolase family 65 central catalytic domain JSQ78_07450 PF03636 Glycosyl hydrolase family 65, N-terminal domain JSQ78_07450 PF02358 Trehalose-phosphatase JSQ78_07450 PF03633 Glycosyl hydrolase family 65, C-terminal domain JSQ78_07455 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JSQ78_07455 PF09363 XFP C-terminal domain JSQ78_07455 PF09364 XFP N-terminal domain JSQ78_07460 PF00403 Heavy-metal-associated domain JSQ78_07470 PF00672 HAMP domain JSQ78_07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_07470 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_07475 PF00072 Response regulator receiver domain JSQ78_07475 PF00486 Transcriptional regulatory protein, C terminal JSQ78_07480 PF01921 tRNA synthetases class I (K) JSQ78_07485 PF02569 Pantoate-beta-alanine ligase JSQ78_07505 PF03816 Cell envelope-related transcriptional attenuator domain JSQ78_07515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JSQ78_07520 PF00809 Pterin binding enzyme JSQ78_07525 PF01227 GTP cyclohydrolase I JSQ78_07530 PF00004 ATPase family associated with various cellular activities (AAA) JSQ78_07530 PF17862 AAA+ lid domain JSQ78_07530 PF01434 Peptidase family M41 JSQ78_07540 PF00156 Phosphoribosyl transferase domain JSQ78_07550 PF01171 PP-loop family JSQ78_07550 PF09179 TilS substrate binding domain JSQ78_07555 PF00719 Inorganic pyrophosphatase JSQ78_07620 PF07969 Amidohydrolase family JSQ78_07625 PF01965 DJ-1/PfpI family JSQ78_07635 PF00128 Alpha amylase, catalytic domain JSQ78_07635 PF11941 Domain of unknown function (DUF3459) JSQ78_07645 PF00128 Alpha amylase, catalytic domain JSQ78_07650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JSQ78_07650 PF00128 Alpha amylase, catalytic domain JSQ78_07665 PF00005 ABC transporter JSQ78_07670 PF00892 EamA-like transporter family JSQ78_07685 PF04122 Putative cell wall binding repeat 2 JSQ78_07685 PF01520 N-acetylmuramoyl-L-alanine amidase JSQ78_07695 PF03741 Integral membrane protein TerC family JSQ78_07695 PF03471 Transporter associated domain JSQ78_07700 PF03099 Biotin/lipoate A/B protein ligase family JSQ78_07700 PF10437 Bacterial lipoate protein ligase C-terminus JSQ78_07710 PF12146 Serine aminopeptidase, S33 JSQ78_07720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JSQ78_07720 PF00205 Thiamine pyrophosphate enzyme, central domain JSQ78_07720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JSQ78_07730 PF00860 Permease family JSQ78_07735 PF01266 FAD dependent oxidoreductase JSQ78_07740 PF00296 Luciferase-like monooxygenase JSQ78_07775 PF05977 Transmembrane secretion effector JSQ78_07795 PF00766 Electron transfer flavoprotein FAD-binding domain JSQ78_07795 PF01012 Electron transfer flavoprotein domain JSQ78_07800 PF01012 Electron transfer flavoprotein domain JSQ78_07810 PF00378 Enoyl-CoA hydratase/isomerase JSQ78_07815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JSQ78_07815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JSQ78_07815 PF00378 Enoyl-CoA hydratase/isomerase JSQ78_07820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JSQ78_07820 PF02770 Acyl-CoA dehydrogenase, middle domain JSQ78_07820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JSQ78_07825 PF00106 short chain dehydrogenase JSQ78_07830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JSQ78_07830 PF02770 Acyl-CoA dehydrogenase, middle domain JSQ78_07830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JSQ78_07835 PF02803 Thiolase, C-terminal domain JSQ78_07835 PF00108 Thiolase, N-terminal domain JSQ78_07840 PF00255 Glutathione peroxidase JSQ78_07850 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_07850 PF00107 Zinc-binding dehydrogenase JSQ78_07860 PF01022 Bacterial regulatory protein, arsR family JSQ78_07870 PF00698 Acyl transferase domain JSQ78_07870 PF14765 Polyketide synthase dehydratase JSQ78_07870 PF16197 Ketoacyl-synthetase C-terminal extension JSQ78_07870 PF00550 Phosphopantetheine attachment site JSQ78_07870 PF08659 KR domain JSQ78_07870 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_07870 PF00109 Beta-ketoacyl synthase, N-terminal domain JSQ78_07870 PF02801 Beta-ketoacyl synthase, C-terminal domain JSQ78_07890 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JSQ78_07895 PF00501 AMP-binding enzyme JSQ78_07900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JSQ78_07900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JSQ78_07930 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JSQ78_07955 PF01850 PIN domain JSQ78_07965 PF00155 Aminotransferase class I and II JSQ78_07965 PF00392 Bacterial regulatory proteins, gntR family JSQ78_07970 PF07690 Major Facilitator Superfamily JSQ78_07970 PF00083 Sugar (and other) transporter JSQ78_07975 PF01070 FMN-dependent dehydrogenase JSQ78_07990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JSQ78_07995 PF01613 Flavin reductase like domain JSQ78_08000 PF00392 Bacterial regulatory proteins, gntR family JSQ78_08000 PF07729 FCD domain JSQ78_08015 PF00561 alpha/beta hydrolase fold JSQ78_08020 PF00171 Aldehyde dehydrogenase family JSQ78_08030 PF00296 Luciferase-like monooxygenase JSQ78_08035 PF02028 BCCT, betaine/carnitine/choline family transporter JSQ78_08045 PF01661 Macro domain JSQ78_08055 PF00248 Aldo/keto reductase family JSQ78_08060 PF01156 Inosine-uridine preferring nucleoside hydrolase JSQ78_08065 PF01979 Amidohydrolase family JSQ78_08075 PF01546 Peptidase family M20/M25/M40 JSQ78_08090 PF01180 Dihydroorotate dehydrogenase JSQ78_08095 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_08100 PF09084 NMT1/THI5 like JSQ78_08105 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_08110 PF00005 ABC transporter JSQ78_08115 PF01048 Phosphorylase superfamily JSQ78_08120 PF01661 Macro domain JSQ78_08135 PF07729 FCD domain JSQ78_08135 PF00392 Bacterial regulatory proteins, gntR family JSQ78_08140 PF07690 Major Facilitator Superfamily JSQ78_08145 PF01156 Inosine-uridine preferring nucleoside hydrolase JSQ78_08155 PF00596 Class II Aldolase and Adducin N-terminal domain JSQ78_08160 PF17042 Nucleotide-binding C-terminal domain JSQ78_08160 PF07005 Sugar-binding N-terminal domain JSQ78_08170 PF01261 Xylose isomerase-like TIM barrel JSQ78_08175 PF01842 ACT domain JSQ78_08175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JSQ78_08175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JSQ78_08180 PF01370 NAD dependent epimerase/dehydratase family JSQ78_08185 PF00753 Metallo-beta-lactamase superfamily JSQ78_08210 PF00083 Sugar (and other) transporter JSQ78_08210 PF07690 Major Facilitator Superfamily JSQ78_08220 PF00171 Aldehyde dehydrogenase family JSQ78_08230 PF07729 FCD domain JSQ78_08230 PF00392 Bacterial regulatory proteins, gntR family JSQ78_08235 PF03466 LysR substrate binding domain JSQ78_08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JSQ78_08240 PF00465 Iron-containing alcohol dehydrogenase JSQ78_08245 PF00171 Aldehyde dehydrogenase family JSQ78_08315 PF00356 Bacterial regulatory proteins, lacI family JSQ78_08320 PF00497 Bacterial extracellular solute-binding proteins, family 3 JSQ78_08325 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_08330 PF00005 ABC transporter JSQ78_08335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JSQ78_08335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JSQ78_08340 PF01266 FAD dependent oxidoreductase JSQ78_08365 PF02661 Fic/DOC family JSQ78_08365 PF12728 Helix-turn-helix domain JSQ78_08375 PF13784 Fic/DOC family N-terminal JSQ78_08375 PF02661 Fic/DOC family JSQ78_08415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JSQ78_08415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JSQ78_08435 PF08379 Bacterial transglutaminase-like N-terminal region JSQ78_08435 PF01841 Transglutaminase-like superfamily JSQ78_08445 PF04174 A circularly permuted ATPgrasp JSQ78_08450 PF00156 Phosphoribosyl transferase domain JSQ78_08470 PF00596 Class II Aldolase and Adducin N-terminal domain JSQ78_08475 PF01261 Xylose isomerase-like TIM barrel JSQ78_08480 PF00596 Class II Aldolase and Adducin N-terminal domain JSQ78_08485 PF02653 Branched-chain amino acid transport system / permease component JSQ78_08490 PF02653 Branched-chain amino acid transport system / permease component JSQ78_08495 PF00005 ABC transporter JSQ78_08500 PF13407 Periplasmic binding protein domain JSQ78_08505 PF00455 DeoR C terminal sensor domain JSQ78_08505 PF08220 DeoR-like helix-turn-helix domain JSQ78_08520 PF00596 Class II Aldolase and Adducin N-terminal domain JSQ78_08525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JSQ78_08525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JSQ78_08530 PF07676 WD40-like Beta Propeller Repeat JSQ78_08530 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JSQ78_08530 PF00326 Prolyl oligopeptidase family JSQ78_08535 PF00294 pfkB family carbohydrate kinase JSQ78_08540 PF17103 Stealth protein CR4, conserved region 4 JSQ78_08540 PF11380 Stealth protein CR2, conserved region 2 JSQ78_08540 PF17101 Stealth protein CR1, conserved region 1 JSQ78_08540 PF17102 Stealth protein CR3, conserved region 3 JSQ78_08545 PF00149 Calcineurin-like phosphoesterase JSQ78_08560 PF00202 Aminotransferase class-III JSQ78_08610 PF00293 NUDIX domain JSQ78_08615 PF01494 FAD binding domain JSQ78_08625 PF00484 Carbonic anhydrase JSQ78_08630 PF00155 Aminotransferase class I and II JSQ78_08635 PF01156 Inosine-uridine preferring nucleoside hydrolase JSQ78_08650 PF00005 ABC transporter JSQ78_08660 PF00296 Luciferase-like monooxygenase JSQ78_08665 PF00171 Aldehyde dehydrogenase family JSQ78_08685 PF00300 Histidine phosphatase superfamily (branch 1) JSQ78_08690 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JSQ78_08690 PF05425 Copper resistance protein D JSQ78_08695 PF00216 Bacterial DNA-binding protein JSQ78_08705 PF00296 Luciferase-like monooxygenase JSQ78_08710 PF00128 Alpha amylase, catalytic domain JSQ78_08710 PF16657 Maltogenic Amylase, C-terminal domain JSQ78_08725 PF00253 Ribosomal protein S14p/S29e JSQ78_08730 PF00471 Ribosomal protein L33 JSQ78_08735 PF00830 Ribosomal L28 family JSQ78_08750 PF00950 ABC 3 transport family JSQ78_08755 PF00950 ABC 3 transport family JSQ78_08760 PF00005 ABC transporter JSQ78_08765 PF01297 Zinc-uptake complex component A periplasmic JSQ78_08770 PF02540 NAD synthase JSQ78_08775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JSQ78_08775 PF00364 Biotin-requiring enzyme JSQ78_08775 PF02817 e3 binding domain JSQ78_08780 PF02779 Transketolase, pyrimidine binding domain JSQ78_08780 PF02780 Transketolase, C-terminal domain JSQ78_08785 PF00676 Dehydrogenase E1 component JSQ78_08790 PF00155 Aminotransferase class I and II JSQ78_08795 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JSQ78_08800 PF03636 Glycosyl hydrolase family 65, N-terminal domain JSQ78_08800 PF03632 Glycosyl hydrolase family 65 central catalytic domain JSQ78_08800 PF03633 Glycosyl hydrolase family 65, C-terminal domain JSQ78_08805 PF00294 pfkB family carbohydrate kinase JSQ78_08815 PF01451 Low molecular weight phosphotyrosine protein phosphatase JSQ78_08820 PF00206 Lyase JSQ78_08820 PF08328 Adenylosuccinate lyase C-terminal JSQ78_08825 PF13823 Alcohol dehydrogenase GroES-associated JSQ78_08825 PF00107 Zinc-binding dehydrogenase JSQ78_08825 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_08830 PF00199 Catalase JSQ78_08830 PF06628 Catalase-related immune-responsive JSQ78_08835 PF01475 Ferric uptake regulator family JSQ78_08840 PF00581 Rhodanese-like domain JSQ78_08865 PF07687 Peptidase dimerisation domain JSQ78_08865 PF01546 Peptidase family M20/M25/M40 JSQ78_08880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JSQ78_08880 PF06827 Zinc finger found in FPG and IleRS JSQ78_08900 PF03796 DnaB-like helicase C terminal domain JSQ78_08900 PF00772 DnaB-like helicase N terminal domain JSQ78_08905 PF03948 Ribosomal protein L9, C-terminal domain JSQ78_08905 PF01281 Ribosomal protein L9, N-terminal domain JSQ78_08910 PF01084 Ribosomal protein S18 JSQ78_08915 PF00436 Single-strand binding protein family JSQ78_08920 PF01250 Ribosomal protein S6 JSQ78_08925 PF12627 Probable RNA and SrmB- binding site of polymerase A JSQ78_08925 PF13735 tRNA nucleotidyltransferase domain 2 putative JSQ78_08925 PF01743 Poly A polymerase head domain JSQ78_08935 PF03023 Lipid II flippase MurJ JSQ78_08945 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_08950 PF00085 Thioredoxin JSQ78_08955 PF17762 HTH domain found in ParB protein JSQ78_08955 PF02195 ParB-like nuclease domain JSQ78_08960 PF13614 AAA domain JSQ78_08965 PF02527 rRNA small subunit methyltransferase G JSQ78_08975 PF02096 60Kd inner membrane protein JSQ78_08980 PF01809 Putative membrane protein insertion efficiency factor JSQ78_08985 PF00825 Ribonuclease P JSQ78_08990 PF00468 Ribosomal protein L34 JSQ78_08995 PF08299 Bacterial dnaA protein helix-turn-helix JSQ78_08995 PF00308 Bacterial dnaA protein JSQ78_09000 PF02767 DNA polymerase III beta subunit, central domain JSQ78_09000 PF02768 DNA polymerase III beta subunit, C-terminal domain JSQ78_09000 PF00712 DNA polymerase III beta subunit, N-terminal domain JSQ78_09005 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JSQ78_09005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JSQ78_09010 PF02463 RecF/RecN/SMC N terminal domain JSQ78_09015 PF05258 Dna[CI] antecedent, DciA JSQ78_09020 PF07729 FCD domain JSQ78_09020 PF00392 Bacterial regulatory proteins, gntR family JSQ78_09030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JSQ78_09030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JSQ78_09035 PF02447 GntP family permease JSQ78_09040 PF01751 Toprim domain JSQ78_09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_09040 PF00204 DNA gyrase B JSQ78_09040 PF00986 DNA gyrase B subunit, carboxyl terminus JSQ78_09045 PF03989 DNA gyrase C-terminal domain, beta-propeller JSQ78_09045 PF00521 DNA gyrase/topoisomerase IV, subunit A JSQ78_09070 PF02028 BCCT, betaine/carnitine/choline family transporter JSQ78_09090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JSQ78_09095 PF01694 Rhomboid family JSQ78_09100 PF06781 Cell division protein CrgA JSQ78_09105 PF04203 Sortase domain JSQ78_09115 PF00117 Glutamine amidotransferase class-I JSQ78_09120 PF03793 PASTA domain JSQ78_09120 PF00069 Protein kinase domain JSQ78_09125 PF00069 Protein kinase domain JSQ78_09130 PF00905 Penicillin binding protein transpeptidase domain JSQ78_09135 PF01098 Cell cycle protein JSQ78_09145 PF16697 Inner membrane component of T3SS, cytoplasmic domain JSQ78_09160 PF00107 Zinc-binding dehydrogenase JSQ78_09160 PF13823 Alcohol dehydrogenase GroES-associated JSQ78_09160 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_09165 PF08946 Osmosensory transporter coiled coil JSQ78_09165 PF00083 Sugar (and other) transporter JSQ78_09170 PF01546 Peptidase family M20/M25/M40 JSQ78_09170 PF07687 Peptidase dimerisation domain JSQ78_09175 PF01321 Creatinase/Prolidase N-terminal domain JSQ78_09175 PF00557 Metallopeptidase family M24 JSQ78_09195 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JSQ78_09195 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JSQ78_09225 PF02678 Pirin JSQ78_09225 PF05726 Pirin C-terminal cupin domain JSQ78_09235 PF01384 Phosphate transporter family JSQ78_09255 PF00356 Bacterial regulatory proteins, lacI family JSQ78_09260 PF01547 Bacterial extracellular solute-binding protein JSQ78_09265 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_09270 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_09280 PF05977 Transmembrane secretion effector JSQ78_09285 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JSQ78_09285 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JSQ78_09285 PF01488 Shikimate / quinate 5-dehydrogenase JSQ78_09290 PF03435 Saccharopine dehydrogenase NADP binding domain JSQ78_09305 PF01208 Uroporphyrinogen decarboxylase (URO-D) JSQ78_09310 PF00890 FAD binding domain JSQ78_09315 PF06778 Chlorite dismutase JSQ78_09320 PF00762 Ferrochelatase JSQ78_09325 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JSQ78_09325 PF03900 Porphobilinogen deaminase, C-terminal domain JSQ78_09345 PF12848 ABC transporter JSQ78_09345 PF00005 ABC transporter JSQ78_09355 PF00490 Delta-aminolevulinic acid dehydratase JSQ78_09360 PF00202 Aminotransferase class-III JSQ78_09370 PF01939 Endonuclease NucS JSQ78_09375 PF07690 Major Facilitator Superfamily JSQ78_09390 PF01431 Peptidase family M13 JSQ78_09390 PF05649 Peptidase family M13 JSQ78_09410 PF01541 GIY-YIG catalytic domain JSQ78_09420 PF05970 PIF1-like helicase JSQ78_09420 PF02689 Helicase JSQ78_09430 PF00293 NUDIX domain JSQ78_09435 PF00348 Polyprenyl synthetase JSQ78_09445 PF01593 Flavin containing amine oxidoreductase JSQ78_09460 PF01040 UbiA prenyltransferase family JSQ78_09465 PF11066 Protein of unknown function (DUF2867) JSQ78_09465 PF13460 NAD(P)H-binding JSQ78_09475 PF01047 MarR family JSQ78_09485 PF02646 RmuC family JSQ78_09495 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JSQ78_09500 PF01968 Hydantoinase/oxoprolinase JSQ78_09500 PF05378 Hydantoinase/oxoprolinase N-terminal region JSQ78_09545 PF09557 Domain of unknown function (DUF2382) JSQ78_09545 PF05239 PRC-barrel domain JSQ78_09555 PF13443 Cro/C1-type HTH DNA-binding domain JSQ78_09560 PF03741 Integral membrane protein TerC family JSQ78_09565 PF04960 Glutaminase JSQ78_09570 PF04960 Glutaminase JSQ78_09575 PF00268 Ribonucleotide reductase, small chain JSQ78_09580 PF02867 Ribonucleotide reductase, barrel domain JSQ78_09580 PF00317 Ribonucleotide reductase, all-alpha domain JSQ78_09580 PF08343 Ribonucleotide reductase N-terminal JSQ78_09585 PF07972 NrdI Flavodoxin like JSQ78_09595 PF01965 DJ-1/PfpI family JSQ78_09600 PF00296 Luciferase-like monooxygenase JSQ78_09605 PF04978 Protein of unknown function (DUF664) JSQ78_09610 PF00375 Sodium:dicarboxylate symporter family JSQ78_09635 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JSQ78_09640 PF01979 Amidohydrolase family JSQ78_09665 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JSQ78_09685 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JSQ78_09700 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_09705 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_09720 PF00004 ATPase family associated with various cellular activities (AAA) JSQ78_09720 PF07724 AAA domain (Cdc48 subfamily) JSQ78_09720 PF17871 AAA lid domain JSQ78_09720 PF02861 Clp amino terminal domain, pathogenicity island component JSQ78_09720 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ78_09730 PF01266 FAD dependent oxidoreductase JSQ78_09745 PF00378 Enoyl-CoA hydratase/isomerase JSQ78_09750 PF00970 Oxidoreductase FAD-binding domain JSQ78_09750 PF00111 2Fe-2S iron-sulfur cluster binding domain JSQ78_09750 PF00175 Oxidoreductase NAD-binding domain JSQ78_09755 PF01883 Iron-sulfur cluster assembly protein JSQ78_09760 PF05138 Phenylacetic acid catabolic protein JSQ78_09765 PF06243 Phenylacetic acid degradation B JSQ78_09770 PF05138 Phenylacetic acid catabolic protein JSQ78_09780 PF00501 AMP-binding enzyme JSQ78_09780 PF14535 AMP-binding enzyme C-terminal domain JSQ78_09785 PF17932 Tetracyclin repressor-like, C-terminal domain JSQ78_09785 PF00440 Bacterial regulatory proteins, tetR family JSQ78_09790 PF06737 Transglycosylase-like domain JSQ78_09790 PF11574 Protein of unknown function (DUF3235) JSQ78_09795 PF00171 Aldehyde dehydrogenase family JSQ78_09795 PF01575 MaoC like domain JSQ78_09800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JSQ78_09800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JSQ78_09805 PF00378 Enoyl-CoA hydratase/isomerase JSQ78_09810 PF02803 Thiolase, C-terminal domain JSQ78_09810 PF00108 Thiolase, N-terminal domain JSQ78_09840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JSQ78_09840 PF02770 Acyl-CoA dehydrogenase, middle domain JSQ78_09840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JSQ78_09845 PF04679 ATP dependent DNA ligase C terminal region JSQ78_09845 PF13298 DNA polymerase Ligase (LigD) JSQ78_09845 PF01068 ATP dependent DNA ligase domain JSQ78_09850 PF02735 Ku70/Ku80 beta-barrel domain JSQ78_09855 PF04107 Glutamate-cysteine ligase family 2(GCS2) JSQ78_09875 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) JSQ78_09930 PF00012 Hsp70 protein JSQ78_09935 PF01025 GrpE JSQ78_09940 PF00226 DnaJ domain JSQ78_09940 PF01556 DnaJ C terminal domain JSQ78_09940 PF00684 DnaJ central domain JSQ78_09945 PF13411 MerR HTH family regulatory protein JSQ78_09970 PF00072 Response regulator receiver domain JSQ78_09970 PF00486 Transcriptional regulatory protein, C terminal JSQ78_09975 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_09975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_09975 PF00672 HAMP domain JSQ78_09990 PF00561 alpha/beta hydrolase fold JSQ78_09995 PF00011 Hsp20/alpha crystallin family JSQ78_10005 PF01022 Bacterial regulatory protein, arsR family JSQ78_10010 PF01545 Cation efflux family JSQ78_10020 PF01464 Transglycosylase SLT domain JSQ78_10020 PF10145 Phage-related minor tail protein JSQ78_10020 PF01551 Peptidase family M23 JSQ78_10025 PF01551 Peptidase family M23 JSQ78_10025 PF08460 Bacterial SH3 domain JSQ78_10035 PF01252 Signal peptidase (SPase) II JSQ78_10045 PF01022 Bacterial regulatory protein, arsR family JSQ78_10055 PF00085 Thioredoxin JSQ78_10060 PF02683 Cytochrome C biogenesis protein transmembrane region JSQ78_10065 PF05140 ResB-like family JSQ78_10075 PF01578 Cytochrome C assembly protein JSQ78_10085 PF01566 Natural resistance-associated macrophage protein JSQ78_10085 PF03358 NADPH-dependent FMN reductase JSQ78_10100 PF00535 Glycosyl transferase family 2 JSQ78_10100 PF00795 Carbon-nitrogen hydrolase JSQ78_10115 PF02016 LD-carboxypeptidase N-terminal domain JSQ78_10115 PF17676 LD-carboxypeptidase C-terminal domain JSQ78_10155 PF00004 ATPase family associated with various cellular activities (AAA) JSQ78_10155 PF07724 AAA domain (Cdc48 subfamily) JSQ78_10155 PF17871 AAA lid domain JSQ78_10155 PF02861 Clp amino terminal domain, pathogenicity island component JSQ78_10155 PF10431 C-terminal, D2-small domain, of ClpB protein JSQ78_10160 PF00083 Sugar (and other) transporter JSQ78_10170 PF00270 DEAD/DEAH box helicase JSQ78_10170 PF00271 Helicase conserved C-terminal domain JSQ78_10175 PF00480 ROK family JSQ78_10210 PF01212 Beta-eliminating lyase JSQ78_10220 PF03441 FAD binding domain of DNA photolyase JSQ78_10220 PF00875 DNA photolyase JSQ78_10240 PF00005 ABC transporter JSQ78_10245 PF00155 Aminotransferase class I and II JSQ78_10245 PF00392 Bacterial regulatory proteins, gntR family JSQ78_10250 PF00398 Ribosomal RNA adenine dimethylase JSQ78_10260 PF00005 ABC transporter JSQ78_10260 PF13732 Domain of unknown function (DUF4162) JSQ78_10275 PF01022 Bacterial regulatory protein, arsR family JSQ78_10290 PF01451 Low molecular weight phosphotyrosine protein phosphatase JSQ78_10295 PF01022 Bacterial regulatory protein, arsR family JSQ78_10300 PF00196 Bacterial regulatory proteins, luxR family JSQ78_10300 PF00072 Response regulator receiver domain JSQ78_10345 PF03180 NLPA lipoprotein JSQ78_10350 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_10355 PF09383 NIL domain JSQ78_10355 PF00005 ABC transporter JSQ78_10365 PF00145 C-5 cytosine-specific DNA methylase JSQ78_10370 PF09126 Restriction endonuclease NaeI JSQ78_10395 PF00296 Luciferase-like monooxygenase JSQ78_10400 PF00083 Sugar (and other) transporter JSQ78_10400 PF07690 Major Facilitator Superfamily JSQ78_10415 PF02423 Ornithine cyclodeaminase/mu-crystallin family JSQ78_10420 PF01321 Creatinase/Prolidase N-terminal domain JSQ78_10420 PF00557 Metallopeptidase family M24 JSQ78_10425 PF00083 Sugar (and other) transporter JSQ78_10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JSQ78_10430 PF03466 LysR substrate binding domain JSQ78_10455 PF00202 Aminotransferase class-III JSQ78_10460 PF00171 Aldehyde dehydrogenase family JSQ78_10465 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JSQ78_10465 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JSQ78_10485 PF01740 STAS domain JSQ78_10485 PF00916 Sulfate permease family JSQ78_10500 PF00571 CBS domain JSQ78_10500 PF03448 MgtE intracellular N domain JSQ78_10500 PF01769 Divalent cation transporter JSQ78_10530 PF06965 Na+/H+ antiporter 1 JSQ78_10540 PF02127 Aminopeptidase I zinc metalloprotease (M18) JSQ78_10550 PF08241 Methyltransferase domain JSQ78_10555 PF01638 HxlR-like helix-turn-helix JSQ78_10565 PF06305 Lipopolysaccharide assembly protein A domain JSQ78_10575 PF00106 short chain dehydrogenase JSQ78_10590 PF00271 Helicase conserved C-terminal domain JSQ78_10590 PF08148 DSHCT (NUC185) domain JSQ78_10590 PF00270 DEAD/DEAH box helicase JSQ78_10595 PF04075 F420H(2)-dependent quinone reductase JSQ78_10610 PF00106 short chain dehydrogenase JSQ78_10620 PF01381 Helix-turn-helix JSQ78_10660 PF00156 Phosphoribosyl transferase domain JSQ78_10690 PF00743 Flavin-binding monooxygenase-like JSQ78_10700 PF13344 Haloacid dehalogenase-like hydrolase JSQ78_10705 PF16555 Gram-positive pilin subunit D1, N-terminal domain JSQ78_10705 PF00746 LPXTG cell wall anchor motif JSQ78_10730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JSQ78_10730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JSQ78_10735 PF00270 DEAD/DEAH box helicase JSQ78_10735 PF00271 Helicase conserved C-terminal domain JSQ78_10735 PF08494 DEAD/H associated JSQ78_10755 PF00764 Arginosuccinate synthase JSQ78_10765 PF03364 Polyketide cyclase / dehydrase and lipid transport JSQ78_10790 PF00440 Bacterial regulatory proteins, tetR family JSQ78_10795 PF00709 Adenylosuccinate synthetase JSQ78_10805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JSQ78_10805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JSQ78_10845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JSQ78_10845 PF02769 AIR synthase related protein, C-terminal domain JSQ78_10845 PF00586 AIR synthase related protein, N-terminal domain JSQ78_10865 PF04228 Putative neutral zinc metallopeptidase JSQ78_10870 PF01259 SAICAR synthetase JSQ78_10875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JSQ78_10875 PF02843 Phosphoribosylglycinamide synthetase, C domain JSQ78_10875 PF02844 Phosphoribosylglycinamide synthetase, N domain JSQ78_10900 PF02667 Short chain fatty acid transporter JSQ78_10905 PF00690 Cation transporter/ATPase, N-terminus JSQ78_10905 PF00689 Cation transporting ATPase, C-terminus JSQ78_10920 PF00156 Phosphoribosyl transferase domain JSQ78_10930 PF00155 Aminotransferase class I and II JSQ78_10935 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_10935 PF00107 Zinc-binding dehydrogenase JSQ78_10940 PF00586 AIR synthase related protein, N-terminal domain JSQ78_10940 PF02769 AIR synthase related protein, C-terminal domain JSQ78_10960 PF03313 Serine dehydratase alpha chain JSQ78_10960 PF03315 Serine dehydratase beta chain JSQ78_10970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JSQ78_10975 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JSQ78_10980 PF13411 MerR HTH family regulatory protein JSQ78_10980 PF07739 TipAS antibiotic-recognition domain JSQ78_10985 PF00873 AcrB/AcrD/AcrF family JSQ78_10995 PF00270 DEAD/DEAH box helicase JSQ78_10995 PF00271 Helicase conserved C-terminal domain JSQ78_11005 PF16124 RecQ zinc-binding JSQ78_11005 PF00570 HRDC domain JSQ78_11005 PF00271 Helicase conserved C-terminal domain JSQ78_11005 PF00270 DEAD/DEAH box helicase JSQ78_11005 PF09382 RQC domain JSQ78_11025 PF03328 HpcH/HpaI aldolase/citrate lyase family JSQ78_11035 PF07690 Major Facilitator Superfamily JSQ78_11040 PF02557 D-alanyl-D-alanine carboxypeptidase JSQ78_11065 PF00893 Small Multidrug Resistance protein JSQ78_11070 PF00893 Small Multidrug Resistance protein JSQ78_11080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JSQ78_11080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JSQ78_11080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JSQ78_11080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JSQ78_11085 PF00282 Pyridoxal-dependent decarboxylase conserved domain JSQ78_11100 PF00005 ABC transporter JSQ78_11115 PF00800 Prephenate dehydratase JSQ78_11120 PF00781 Diacylglycerol kinase catalytic domain JSQ78_11125 PF02403 Seryl-tRNA synthetase N-terminal domain JSQ78_11125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JSQ78_11150 PF00313 'Cold-shock' DNA-binding domain JSQ78_11175 PF00491 Arginase family JSQ78_11185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JSQ78_11190 PF01565 FAD binding domain JSQ78_11190 PF02913 FAD linked oxidases, C-terminal domain JSQ78_11195 PF00300 Histidine phosphatase superfamily (branch 1) JSQ78_11200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JSQ78_11200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JSQ78_11205 PF04542 Sigma-70 region 2 JSQ78_11205 PF04545 Sigma-70, region 4 JSQ78_11210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JSQ78_11210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JSQ78_11225 PF02540 NAD synthase JSQ78_11225 PF00117 Glutamine amidotransferase class-I JSQ78_11225 PF00958 GMP synthase C terminal domain JSQ78_11235 PF00072 Response regulator receiver domain JSQ78_11235 PF00486 Transcriptional regulatory protein, C terminal JSQ78_11245 PF14437 MafB19-like deaminase JSQ78_11260 PF01545 Cation efflux family JSQ78_11260 PF16916 Dimerisation domain of Zinc Transporter JSQ78_11265 PF03807 NADP oxidoreductase coenzyme F420-dependent JSQ78_11265 PF14748 Pyrroline-5-carboxylate reductase dimerisation JSQ78_11270 PF02810 SEC-C motif JSQ78_11275 PF02080 TrkA-C domain JSQ78_11275 PF02254 TrkA-N domain JSQ78_11280 PF02386 Cation transport protein JSQ78_11285 PF01022 Bacterial regulatory protein, arsR family JSQ78_11295 PF05768 Glutaredoxin-like domain (DUF836) JSQ78_11300 PF01336 OB-fold nucleic acid binding domain JSQ78_11300 PF00152 tRNA synthetases class II (D, K and N) JSQ78_11310 PF00300 Histidine phosphatase superfamily (branch 1) JSQ78_11315 PF00085 Thioredoxin JSQ78_11320 PF02683 Cytochrome C biogenesis protein transmembrane region JSQ78_11330 PF01578 Cytochrome C assembly protein JSQ78_11340 PF18374 Enolase N-terminal domain-like JSQ78_11340 PF13378 Enolase C-terminal domain-like JSQ78_11375 PF00378 Enoyl-CoA hydratase/isomerase JSQ78_11380 PF00501 AMP-binding enzyme JSQ78_11380 PF13193 AMP-binding enzyme C-terminal domain JSQ78_11385 PF01040 UbiA prenyltransferase family JSQ78_11400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JSQ78_11405 PF00106 short chain dehydrogenase JSQ78_11410 PF01594 AI-2E family transporter JSQ78_11415 PF03976 Polyphosphate kinase 2 (PPK2) JSQ78_11420 PF00425 chorismate binding enzyme JSQ78_11425 PF01209 ubiE/COQ5 methyltransferase family JSQ78_11430 PF00348 Polyprenyl synthetase JSQ78_11435 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_11440 PF01925 Sulfite exporter TauE/SafE JSQ78_11445 PF13396 Phospholipase_D-nuclease N-terminal JSQ78_11445 PF13091 PLD-like domain JSQ78_11450 PF04461 Protein of unknown function (DUF520) JSQ78_11465 PF00459 Inositol monophosphatase family JSQ78_11470 PF01476 LysM domain JSQ78_11470 PF08525 Opacity-associated protein A N-terminal motif JSQ78_11470 PF01551 Peptidase family M23 JSQ78_11475 PF00128 Alpha amylase, catalytic domain JSQ78_11480 PF13416 Bacterial extracellular solute-binding protein JSQ78_11485 PF14785 Maltose transport system permease protein MalF P2 domain JSQ78_11485 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_11490 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_11510 PF00474 Sodium:solute symporter family JSQ78_11530 PF13452 N-terminal half of MaoC dehydratase JSQ78_11540 PF01565 FAD binding domain JSQ78_11540 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JSQ78_11550 PF00196 Bacterial regulatory proteins, luxR family JSQ78_11550 PF00072 Response regulator receiver domain JSQ78_11555 PF17200 Single Cache domain 2 JSQ78_11555 PF07730 Histidine kinase JSQ78_11565 PF00005 ABC transporter JSQ78_11570 PF07859 alpha/beta hydrolase fold JSQ78_11575 PF00155 Aminotransferase class I and II JSQ78_11590 PF02357 Transcription termination factor nusG JSQ78_11595 PF00298 Ribosomal protein L11, RNA binding domain JSQ78_11595 PF03946 Ribosomal protein L11, N-terminal domain JSQ78_11600 PF00687 Ribosomal protein L1p/L10e family JSQ78_11610 PF00196 Bacterial regulatory proteins, luxR family JSQ78_11610 PF00072 Response regulator receiver domain JSQ78_11620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JSQ78_11625 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_11630 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_11630 PF12911 N-terminal TM domain of oligopeptide transport permease C JSQ78_11635 PF00005 ABC transporter JSQ78_11635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JSQ78_11640 PF00698 Acyl transferase domain JSQ78_11640 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_11640 PF08990 Erythronolide synthase docking JSQ78_11640 PF09277 Erythronolide synthase, docking JSQ78_11640 PF16197 Ketoacyl-synthetase C-terminal extension JSQ78_11640 PF02801 Beta-ketoacyl synthase, C-terminal domain JSQ78_11640 PF08659 KR domain JSQ78_11640 PF00550 Phosphopantetheine attachment site JSQ78_11640 PF14765 Polyketide synthase dehydratase JSQ78_11640 PF00109 Beta-ketoacyl synthase, N-terminal domain JSQ78_11665 PF00486 Transcriptional regulatory protein, C terminal JSQ78_11665 PF00072 Response regulator receiver domain JSQ78_11670 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_11670 PF00672 HAMP domain JSQ78_11675 PF00466 Ribosomal protein L10 JSQ78_11680 PF00542 Ribosomal protein L7/L12 C-terminal domain JSQ78_11680 PF16320 Ribosomal protein L7/L12 dimerisation domain JSQ78_11690 PF00664 ABC transporter transmembrane region JSQ78_11690 PF00005 ABC transporter JSQ78_11700 PF00571 CBS domain JSQ78_11700 PF00291 Pyridoxal-phosphate dependent enzyme JSQ78_11705 PF01053 Cys/Met metabolism PLP-dependent enzyme JSQ78_11710 PF07690 Major Facilitator Superfamily JSQ78_11720 PF01979 Amidohydrolase family JSQ78_11725 PF07690 Major Facilitator Superfamily JSQ78_11730 PF05872 Bacterial protein of unknown function (DUF853) JSQ78_11735 PF00672 HAMP domain JSQ78_11735 PF18698 Histidine kinase sensor domain JSQ78_11735 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_11735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_11740 PF00535 Glycosyl transferase family 2 JSQ78_11755 PF00072 Response regulator receiver domain JSQ78_11755 PF00486 Transcriptional regulatory protein, C terminal JSQ78_11765 PF05922 Peptidase inhibitor I9 JSQ78_11765 PF00082 Subtilase family JSQ78_11770 PF01515 Phosphate acetyl/butaryl transferase JSQ78_11770 PF07085 DRTGG domain JSQ78_11775 PF00871 Acetokinase family JSQ78_11790 PF12169 DNA polymerase III subunits gamma and tau domain III JSQ78_11795 PF13662 Toprim domain JSQ78_11795 PF02132 RecR protein JSQ78_11800 PF13840 ACT domain JSQ78_11800 PF01842 ACT domain JSQ78_11800 PF00696 Amino acid kinase family JSQ78_11805 PF01118 Semialdehyde dehydrogenase, NAD binding domain JSQ78_11805 PF02774 Semialdehyde dehydrogenase, dimerisation domain JSQ78_11815 PF06039 Malate:quinone oxidoreductase (Mqo) JSQ78_11825 PF00265 Thymidine kinase JSQ78_11840 PF00912 Transglycosylase JSQ78_11840 PF00905 Penicillin binding protein transpeptidase domain JSQ78_11860 PF13193 AMP-binding enzyme C-terminal domain JSQ78_11860 PF16177 Acetyl-coenzyme A synthetase N-terminus JSQ78_11860 PF00501 AMP-binding enzyme JSQ78_11865 PF00437 Type II/IV secretion system protein JSQ78_11890 PF01131 DNA topoisomerase JSQ78_11890 PF01751 Toprim domain JSQ78_11890 PF13368 Topoisomerase C-terminal repeat JSQ78_11895 PF02223 Thymidylate kinase JSQ78_11900 PF09115 DNA polymerase III, delta subunit, C terminal JSQ78_11910 PF00561 alpha/beta hydrolase fold JSQ78_11920 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JSQ78_11920 PF09363 XFP C-terminal domain JSQ78_11920 PF09364 XFP N-terminal domain JSQ78_11935 PF01850 PIN domain JSQ78_11940 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JSQ78_11945 PF00857 Isochorismatase family JSQ78_11950 PF03176 MMPL family JSQ78_11955 PF00171 Aldehyde dehydrogenase family JSQ78_11960 PF00664 ABC transporter transmembrane region JSQ78_11960 PF00005 ABC transporter JSQ78_11970 PF00005 ABC transporter JSQ78_11990 PF01975 Survival protein SurE JSQ78_12000 PF00083 Sugar (and other) transporter JSQ78_12000 PF07690 Major Facilitator Superfamily JSQ78_12005 PF00885 6,7-dimethyl-8-ribityllumazine synthase JSQ78_12010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JSQ78_12010 PF00925 GTP cyclohydrolase II JSQ78_12015 PF00677 Lumazine binding domain JSQ78_12020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JSQ78_12020 PF01872 RibD C-terminal domain JSQ78_12030 PF00579 tRNA synthetases class I (W and Y) JSQ78_12045 PF00391 PEP-utilising enzyme, mobile domain JSQ78_12045 PF02896 PEP-utilising enzyme, TIM barrel domain JSQ78_12045 PF05524 PEP-utilising enzyme, N-terminal JSQ78_12050 PF00009 Elongation factor Tu GTP binding domain JSQ78_12050 PF11987 Translation-initiation factor 2 JSQ78_12050 PF04760 Translation initiation factor IF-2, N-terminal region JSQ78_12055 PF01926 50S ribosome-binding GTPase JSQ78_12055 PF12631 MnmE helical domain JSQ78_12055 PF10396 GTP-binding protein TrmE N-terminus JSQ78_12065 PF13085 2Fe-2S iron-sulfur cluster binding domain JSQ78_12070 PF00890 FAD binding domain JSQ78_12070 PF02910 Fumarate reductase flavoprotein C-term JSQ78_12080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JSQ78_12085 PF13439 Glycosyltransferase Family 4 JSQ78_12085 PF00534 Glycosyl transferases group 1 JSQ78_12090 PF01050 Mannose-6-phosphate isomerase JSQ78_12090 PF00483 Nucleotidyl transferase JSQ78_12095 PF02608 ABC transporter substrate-binding protein PnrA-like JSQ78_12105 PF00005 ABC transporter JSQ78_12110 PF02653 Branched-chain amino acid transport system / permease component JSQ78_12115 PF02653 Branched-chain amino acid transport system / permease component JSQ78_12120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JSQ78_12125 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JSQ78_12125 PF00591 Glycosyl transferase family, a/b domain JSQ78_12125 PF02885 Glycosyl transferase family, helical bundle domain JSQ78_12135 PF00962 Adenosine/AMP deaminase JSQ78_12140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JSQ78_12145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JSQ78_12145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JSQ78_12145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JSQ78_12145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JSQ78_12150 PF01048 Phosphorylase superfamily JSQ78_12160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JSQ78_12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_12165 PF00364 Biotin-requiring enzyme JSQ78_12165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JSQ78_12165 PF02785 Biotin carboxylase C-terminal domain JSQ78_12165 PF00289 Biotin carboxylase, N-terminal domain JSQ78_12180 PF00664 ABC transporter transmembrane region JSQ78_12180 PF00005 ABC transporter JSQ78_12185 PF00005 ABC transporter JSQ78_12185 PF00664 ABC transporter transmembrane region JSQ78_12195 PF02545 Maf-like protein JSQ78_12200 PF00056 lactate/malate dehydrogenase, NAD binding domain JSQ78_12200 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JSQ78_12205 PF05958 tRNA (Uracil-5-)-methyltransferase JSQ78_12205 PF01938 TRAM domain JSQ78_12210 PF00872 Transposase, Mutator family JSQ78_12215 PF01494 FAD binding domain JSQ78_12225 PF01757 Acyltransferase family JSQ78_12230 PF01757 Acyltransferase family JSQ78_12240 PF01039 Carboxyl transferase domain JSQ78_12245 PF02237 Biotin protein ligase C terminal domain JSQ78_12245 PF03099 Biotin/lipoate A/B protein ligase family JSQ78_12245 PF08279 HTH domain JSQ78_12255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JSQ78_12255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JSQ78_12255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JSQ78_12260 PF02222 ATP-grasp domain JSQ78_12260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JSQ78_12265 PF00731 AIR carboxylase JSQ78_12270 PF03816 Cell envelope-related transcriptional attenuator domain JSQ78_12275 PF00535 Glycosyl transferase family 2 JSQ78_12295 PF00483 Nucleotidyl transferase JSQ78_12300 PF00535 Glycosyl transferase family 2 JSQ78_12320 PF00005 ABC transporter JSQ78_12320 PF14524 Wzt C-terminal domain JSQ78_12340 PF00535 Glycosyl transferase family 2 JSQ78_12360 PF00535 Glycosyl transferase family 2 JSQ78_12365 PF02770 Acyl-CoA dehydrogenase, middle domain JSQ78_12365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JSQ78_12365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JSQ78_12370 PF01238 Phosphomannose isomerase type I JSQ78_12375 PF02467 Transcription factor WhiB JSQ78_12385 PF00535 Glycosyl transferase family 2 JSQ78_12385 PF00534 Glycosyl transferases group 1 JSQ78_12405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JSQ78_12405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JSQ78_12405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JSQ78_12405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JSQ78_12410 PF16363 GDP-mannose 4,6 dehydratase JSQ78_12415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JSQ78_12425 PF05221 S-adenosyl-L-homocysteine hydrolase JSQ78_12425 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JSQ78_12445 PF00132 Bacterial transferase hexapeptide (six repeats) JSQ78_12445 PF12804 MobA-like NTP transferase domain JSQ78_12450 PF14572 Phosphoribosyl synthetase-associated domain JSQ78_12450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JSQ78_12460 PF05958 tRNA (Uracil-5-)-methyltransferase JSQ78_12475 PF13520 Amino acid permease JSQ78_12485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JSQ78_12485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JSQ78_12495 PF00296 Luciferase-like monooxygenase JSQ78_12500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JSQ78_12500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JSQ78_12510 PF00083 Sugar (and other) transporter JSQ78_12520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JSQ78_12530 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_12530 PF00107 Zinc-binding dehydrogenase JSQ78_12540 PF02447 GntP family permease JSQ78_12545 PF14693 Ribosomal protein TL5, C-terminal domain JSQ78_12545 PF01386 Ribosomal L25p family JSQ78_12550 PF01195 Peptidyl-tRNA hydrolase JSQ78_12560 PF00270 DEAD/DEAH box helicase JSQ78_12560 PF00271 Helicase conserved C-terminal domain JSQ78_12560 PF03461 TRCF domain JSQ78_12560 PF17757 UvrB interaction domain JSQ78_12560 PF02559 CarD-like/TRCF domain JSQ78_12565 PF03819 MazG nucleotide pyrophosphohydrolase domain JSQ78_12605 PF13393 Histidyl-tRNA synthetase JSQ78_12610 PF00113 Enolase, C-terminal TIM barrel domain JSQ78_12610 PF03952 Enolase, N-terminal domain JSQ78_12645 PF06224 Winged helix DNA-binding domain JSQ78_12650 PF01594 AI-2E family transporter JSQ78_12655 PF13291 ACT domain JSQ78_12655 PF00291 Pyridoxal-phosphate dependent enzyme JSQ78_12660 PF01272 Transcription elongation factor, GreA/GreB, C-term JSQ78_12660 PF03449 Transcription elongation factor, N-terminal JSQ78_12670 PF02585 GlcNAc-PI de-N-acetylase JSQ78_12705 PF07568 Histidine kinase JSQ78_12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_12705 PF12282 Signal transduction histidine kinase JSQ78_12710 PF02467 Transcription factor WhiB JSQ78_12720 PF00578 AhpC/TSA family JSQ78_12730 PF00589 Phage integrase family JSQ78_12730 PF02899 Phage integrase, N-terminal SAM-like domain JSQ78_12790 PF00005 ABC transporter JSQ78_12790 PF02687 FtsX-like permease family JSQ78_12790 PF12704 MacB-like periplasmic core domain JSQ78_12820 PF01527 Transposase JSQ78_12830 PF02899 Phage integrase, N-terminal SAM-like domain JSQ78_12830 PF00589 Phage integrase family JSQ78_12865 PF00155 Aminotransferase class I and II JSQ78_12870 PF00294 pfkB family carbohydrate kinase JSQ78_12890 PF03176 MMPL family JSQ78_12900 PF00501 AMP-binding enzyme JSQ78_12900 PF13193 AMP-binding enzyme C-terminal domain JSQ78_12905 PF08240 Alcohol dehydrogenase GroES-like domain JSQ78_12905 PF00107 Zinc-binding dehydrogenase JSQ78_12910 PF00356 Bacterial regulatory proteins, lacI family JSQ78_12915 PF01261 Xylose isomerase-like TIM barrel JSQ78_12920 PF00920 Dehydratase family JSQ78_12925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JSQ78_12925 PF00205 Thiamine pyrophosphate enzyme, central domain JSQ78_12925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JSQ78_12930 PF10369 Small subunit of acetolactate synthase JSQ78_12935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JSQ78_12935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JSQ78_12940 PF00355 Rieske [2Fe-2S] domain JSQ78_12970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JSQ78_12970 PF01842 ACT domain JSQ78_12970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JSQ78_12975 PF00440 Bacterial regulatory proteins, tetR family JSQ78_12975 PF08361 MAATS-type transcriptional repressor, C-terminal region JSQ78_12980 PF07690 Major Facilitator Superfamily JSQ78_12990 PF00672 HAMP domain JSQ78_12990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JSQ78_12990 PF00512 His Kinase A (phospho-acceptor) domain JSQ78_13000 PF00180 Isocitrate/isopropylmalate dehydrogenase JSQ78_13005 PF01063 Amino-transferase class IV JSQ78_13010 PF01557 Fumarylacetoacetate (FAA) hydrolase family JSQ78_13025 PF00749 tRNA synthetases class I (E and Q), catalytic domain JSQ78_13030 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_13065 PF01494 FAD binding domain JSQ78_13065 PF07976 Phenol hydroxylase, C-terminal dimerisation domain JSQ78_13070 PF03328 HpcH/HpaI aldolase/citrate lyase family JSQ78_13075 PF01557 Fumarylacetoacetate (FAA) hydrolase family JSQ78_13080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JSQ78_13085 PF00171 Aldehyde dehydrogenase family JSQ78_13095 PF01557 Fumarylacetoacetate (FAA) hydrolase family JSQ78_13100 PF07690 Major Facilitator Superfamily JSQ78_13100 PF00083 Sugar (and other) transporter JSQ78_13110 PF03466 LysR substrate binding domain JSQ78_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JSQ78_13115 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_13120 PF18030 RimK PreATP-grasp domain JSQ78_13120 PF02080 TrkA-C domain JSQ78_13120 PF08443 RimK-like ATP-grasp domain JSQ78_13125 PF08443 RimK-like ATP-grasp domain JSQ78_13125 PF18030 RimK PreATP-grasp domain JSQ78_13160 PF00781 Diacylglycerol kinase catalytic domain JSQ78_13170 PF00056 lactate/malate dehydrogenase, NAD binding domain JSQ78_13170 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JSQ78_13175 PF00330 Aconitase family (aconitate hydratase) JSQ78_13180 PF00694 Aconitase C-terminal domain JSQ78_13185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JSQ78_13195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JSQ78_13195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JSQ78_13200 PF01820 D-ala D-ala ligase N-terminus JSQ78_13200 PF07478 D-ala D-ala ligase C-terminus JSQ78_13220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JSQ78_13220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JSQ78_13230 PF00708 Acylphosphatase JSQ78_13245 PF06071 Protein of unknown function (DUF933) JSQ78_13245 PF01926 50S ribosome-binding GTPase JSQ78_13255 PF01381 Helix-turn-helix JSQ78_13260 PF00561 alpha/beta hydrolase fold JSQ78_13275 PF01451 Low molecular weight phosphotyrosine protein phosphatase JSQ78_13280 PF01451 Low molecular weight phosphotyrosine protein phosphatase JSQ78_13285 PF01451 Low molecular weight phosphotyrosine protein phosphatase JSQ78_13290 PF01758 Sodium Bile acid symporter family JSQ78_13295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JSQ78_13315 PF01252 Signal peptidase (SPase) II JSQ78_13320 PF01022 Bacterial regulatory protein, arsR family JSQ78_13335 PF00994 Probable molybdopterin binding domain JSQ78_13335 PF18146 Damage-inducible protein CinA KH domain JSQ78_13335 PF02464 Competence-damaged protein JSQ78_13340 PF17755 UvrA DNA-binding domain JSQ78_13350 PF03471 Transporter associated domain JSQ78_13350 PF01595 Cyclin M transmembrane N-terminal domain JSQ78_13350 PF00571 CBS domain JSQ78_13360 PF03462 PCRF domain JSQ78_13360 PF00472 RF-1 domain JSQ78_13375 PF12848 ABC transporter JSQ78_13375 PF16326 ABC transporter C-terminal domain JSQ78_13375 PF00005 ABC transporter JSQ78_13400 PF00202 Aminotransferase class-III JSQ78_13435 PF00011 Hsp20/alpha crystallin family JSQ78_13450 PF00176 SNF2 family N-terminal domain JSQ78_13450 PF04434 SWIM zinc finger JSQ78_13450 PF00271 Helicase conserved C-terminal domain JSQ78_13470 PF01066 CDP-alcohol phosphatidyltransferase JSQ78_13480 PF07690 Major Facilitator Superfamily JSQ78_13500 PF13476 AAA domain JSQ78_13505 PF00149 Calcineurin-like phosphoesterase JSQ78_13505 PF12320 Type 5 capsule protein repressor C-terminal domain JSQ78_13510 PF00361 Proton-conducting membrane transporter JSQ78_13510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JSQ78_13510 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JSQ78_13510 PF13244 Domain of unknown function (DUF4040) JSQ78_13515 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JSQ78_13520 PF00361 Proton-conducting membrane transporter JSQ78_13530 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JSQ78_13535 PF03334 Na+/H+ antiporter subunit JSQ78_13540 PF08669 Glycine cleavage T-protein C-terminal barrel domain JSQ78_13540 PF01571 Aminomethyltransferase folate-binding domain JSQ78_13545 PF01597 Glycine cleavage H-protein JSQ78_13550 PF02347 Glycine cleavage system P-protein JSQ78_13565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JSQ78_13570 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_13575 PF00528 Binding-protein-dependent transport system inner membrane component JSQ78_13575 PF12911 N-terminal TM domain of oligopeptide transport permease C JSQ78_13585 PF00005 ABC transporter JSQ78_13585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JSQ78_13590 PF00679 Elongation factor G C-terminus JSQ78_13590 PF14492 Elongation Factor G, domain II JSQ78_13590 PF00009 Elongation factor Tu GTP binding domain JSQ78_13590 PF03144 Elongation factor Tu domain 2 JSQ78_13595 PF03358 NADPH-dependent FMN reductase JSQ78_13600 PF02585 GlcNAc-PI de-N-acetylase JSQ78_13605 PF00037 4Fe-4S binding domain JSQ78_13610 PF00155 Aminotransferase class I and II JSQ78_13615 PF00285 Citrate synthase, C-terminal domain JSQ78_13620 PF00860 Permease family JSQ78_13630 PF00005 ABC transporter JSQ78_13630 PF13732 Domain of unknown function (DUF4162) JSQ78_13635 PF14602 Hexapeptide repeat of succinyl-transferase JSQ78_13635 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JSQ78_13640 PF07687 Peptidase dimerisation domain JSQ78_13640 PF01546 Peptidase family M20/M25/M40 JSQ78_13655 PF01596 O-methyltransferase JSQ78_13660 PF02416 mttA/Hcf106 family JSQ78_13665 PF01883 Iron-sulfur cluster assembly protein JSQ78_13665 PF10609 NUBPL iron-transfer P-loop NTPase JSQ78_13675 PF01769 Divalent cation transporter JSQ78_13675 PF00571 CBS domain JSQ78_13675 PF03448 MgtE intracellular N domain JSQ78_13690 PF01810 LysE type translocator JSQ78_13695 PF05195 Aminopeptidase P, N-terminal domain JSQ78_13695 PF00557 Metallopeptidase family M24