locus-tag class description DCE93_00005 PF08299 Bacterial dnaA protein helix-turn-helix DCE93_00005 PF00308 Bacterial dnaA protein DCE93_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DCE93_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DCE93_00010 PF02767 DNA polymerase III beta subunit, central domain DCE93_00015 PF02463 RecF/RecN/SMC N terminal domain DCE93_00020 PF05258 Dna[CI] antecedent, DciA DCE93_00025 PF00204 DNA gyrase B DCE93_00025 PF01751 Toprim domain DCE93_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DCE93_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DCE93_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DCE93_00055 PF00293 NUDIX domain DCE93_00055 PF13344 Haloacid dehalogenase-like hydrolase DCE93_00070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DCE93_00075 PF01694 Rhomboid family DCE93_00080 PF06781 Cell division protein CrgA DCE93_00085 PF04203 Sortase domain DCE93_00090 PF00117 Glutamine amidotransferase class-I DCE93_00095 PF00069 Protein kinase domain DCE93_00095 PF03793 PASTA domain DCE93_00100 PF00069 Protein kinase domain DCE93_00105 PF00905 Penicillin binding protein transpeptidase domain DCE93_00110 PF01098 Cell cycle protein DCE93_00120 PF16697 Inner membrane component of T3SS, cytoplasmic domain DCE93_00125 PF00498 FHA domain DCE93_00125 PF12401 Protein of unknown function (DUF2662) DCE93_00130 PF03636 Glycosyl hydrolase family 65, N-terminal domain DCE93_00130 PF03633 Glycosyl hydrolase family 65, C-terminal domain DCE93_00130 PF03632 Glycosyl hydrolase family 65 central catalytic domain DCE93_00135 PF13419 Haloacid dehalogenase-like hydrolase DCE93_00145 PF13280 WYL domain DCE93_00145 PF08279 HTH domain DCE93_00160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DCE93_00165 PF01380 SIS domain DCE93_00170 PF00196 Bacterial regulatory proteins, luxR family DCE93_00225 PF07859 alpha/beta hydrolase fold DCE93_00230 PF03576 Peptidase family S58 DCE93_00235 PF05025 RbsD / FucU transport protein family DCE93_00240 PF00356 Bacterial regulatory proteins, lacI family DCE93_00245 PF00296 Luciferase-like monooxygenase DCE93_00250 PF01979 Amidohydrolase family DCE93_00250 PF00449 Urease alpha-subunit, N-terminal domain DCE93_00255 PF00107 Zinc-binding dehydrogenase DCE93_00255 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_00260 PF00294 pfkB family carbohydrate kinase DCE93_00270 PF00294 pfkB family carbohydrate kinase DCE93_00315 PF00282 Pyridoxal-dependent decarboxylase conserved domain DCE93_00320 PF00005 ABC transporter DCE93_00320 PF12857 TOBE-like domain DCE93_00330 PF08361 MAATS-type transcriptional repressor, C-terminal region DCE93_00330 PF00440 Bacterial regulatory proteins, tetR family DCE93_00340 PF01223 DNA/RNA non-specific endonuclease DCE93_00345 PF01494 FAD binding domain DCE93_00350 PF00892 EamA-like transporter family DCE93_00355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DCE93_00355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DCE93_00360 PF01047 MarR family DCE93_00390 PF01451 Low molecular weight phosphotyrosine protein phosphatase DCE93_00395 PF00230 Major intrinsic protein DCE93_00400 PF01451 Low molecular weight phosphotyrosine protein phosphatase DCE93_00420 PF01022 Bacterial regulatory protein, arsR family DCE93_00425 PF08031 Berberine and berberine like DCE93_00425 PF01565 FAD binding domain DCE93_00435 PF00326 Prolyl oligopeptidase family DCE93_00435 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DCE93_00440 PF13193 AMP-binding enzyme C-terminal domain DCE93_00440 PF00550 Phosphopantetheine attachment site DCE93_00440 PF00668 Condensation domain DCE93_00440 PF00551 Formyl transferase DCE93_00440 PF00501 AMP-binding enzyme DCE93_00445 PF00005 ABC transporter DCE93_00445 PF08402 TOBE domain DCE93_00450 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_00460 PF03239 Iron permease FTR1 family DCE93_00465 PF13473 Cupredoxin-like domain DCE93_00465 PF09375 Imelysin DCE93_00470 PF04261 Dyp-type peroxidase family DCE93_00470 PF10518 TAT (twin-arginine translocation) pathway signal sequence DCE93_00485 PF00392 Bacterial regulatory proteins, gntR family DCE93_00500 PF00211 Adenylate and Guanylate cyclase catalytic domain DCE93_00500 PF13191 AAA ATPase domain DCE93_00505 PF02789 Cytosol aminopeptidase family, N-terminal domain DCE93_00505 PF00883 Cytosol aminopeptidase family, catalytic domain DCE93_00510 PF07690 Major Facilitator Superfamily DCE93_00515 PF02080 TrkA-C domain DCE93_00515 PF03600 Citrate transporter DCE93_00520 PF00294 pfkB family carbohydrate kinase DCE93_00520 PF01467 Cytidylyltransferase-like DCE93_00525 PF00440 Bacterial regulatory proteins, tetR family DCE93_00525 PF17934 Tetracyclin repressor-like, C-terminal domain DCE93_00535 PF05547 Immune inhibitor A peptidase M6 DCE93_00545 PF01939 Endonuclease NucS DCE93_00550 PF07690 Major Facilitator Superfamily DCE93_00555 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_00555 PF00107 Zinc-binding dehydrogenase DCE93_00560 PF00155 Aminotransferase class I and II DCE93_00565 PF00356 Bacterial regulatory proteins, lacI family DCE93_00580 PF01554 MatE DCE93_00585 PF01431 Peptidase family M13 DCE93_00585 PF05649 Peptidase family M13 DCE93_00590 PF00768 D-alanyl-D-alanine carboxypeptidase DCE93_00600 PF00293 NUDIX domain DCE93_00605 PF00756 Putative esterase DCE93_00610 PF03129 Anticodon binding domain DCE93_00610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCE93_00615 PF03352 Methyladenine glycosylase DCE93_00615 PF13302 Acetyltransferase (GNAT) domain DCE93_00615 PF13673 Acetyltransferase (GNAT) domain DCE93_00615 PF00117 Glutamine amidotransferase class-I DCE93_00615 PF00958 GMP synthase C terminal domain DCE93_00620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DCE93_00620 PF01488 Shikimate / quinate 5-dehydrogenase DCE93_00620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DCE93_00630 PF01208 Uroporphyrinogen decarboxylase (URO-D) DCE93_00635 PF01593 Flavin containing amine oxidoreductase DCE93_00685 PF00293 NUDIX domain DCE93_00710 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DCE93_00710 PF03900 Porphobilinogen deaminase, C-terminal domain DCE93_00720 PF00490 Delta-aminolevulinic acid dehydratase DCE93_00725 PF00202 Aminotransferase class-III DCE93_00750 PF00005 ABC transporter DCE93_00755 PF00266 Aminotransferase class-V DCE93_00785 PF01810 LysE type translocator DCE93_00790 PF00378 Enoyl-CoA hydratase/isomerase DCE93_00795 PF07729 FCD domain DCE93_00795 PF00392 Bacterial regulatory proteins, gntR family DCE93_00800 PF03972 MmgE/PrpD family DCE93_00810 PF00285 Citrate synthase, C-terminal domain DCE93_00820 PF01594 AI-2E family transporter DCE93_00835 PF01638 HxlR-like helix-turn-helix DCE93_00860 PF13732 Domain of unknown function (DUF4162) DCE93_00860 PF00005 ABC transporter DCE93_00880 PF00171 Aldehyde dehydrogenase family DCE93_00885 PF18030 RimK PreATP-grasp domain DCE93_00885 PF08443 RimK-like ATP-grasp domain DCE93_00890 PF02080 TrkA-C domain DCE93_00890 PF18030 RimK PreATP-grasp domain DCE93_00890 PF08443 RimK-like ATP-grasp domain DCE93_00895 PF00392 Bacterial regulatory proteins, gntR family DCE93_00910 PF00202 Aminotransferase class-III DCE93_00920 PF07498 Rho termination factor, N-terminal domain DCE93_00920 PF00318 Ribosomal protein S2 DCE93_00925 PF07993 Male sterility protein DCE93_00925 PF00501 AMP-binding enzyme DCE93_00925 PF00550 Phosphopantetheine attachment site DCE93_00925 PF13193 AMP-binding enzyme C-terminal domain DCE93_00925 PF00668 Condensation domain DCE93_00930 PF11838 ERAP1-like C-terminal domain DCE93_00930 PF01433 Peptidase family M1 domain DCE93_00940 PF00561 alpha/beta hydrolase fold DCE93_00950 PF00854 POT family DCE93_00955 PF00535 Glycosyl transferase family 2 DCE93_00965 PF08359 YsiA-like protein, C-terminal region DCE93_00965 PF00440 Bacterial regulatory proteins, tetR family DCE93_00980 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DCE93_00985 PF03737 Aldolase/RraA DCE93_00990 PF01070 FMN-dependent dehydrogenase DCE93_00995 PF07729 FCD domain DCE93_00995 PF00392 Bacterial regulatory proteins, gntR family DCE93_01000 PF00188 Cysteine-rich secretory protein family DCE93_01010 PF00248 Aldo/keto reductase family DCE93_01020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DCE93_01035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DCE93_01035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DCE93_01040 PF00596 Class II Aldolase and Adducin N-terminal domain DCE93_01045 PF01261 Xylose isomerase-like TIM barrel DCE93_01050 PF05336 L-rhamnose mutarotase DCE93_01060 PF02653 Branched-chain amino acid transport system / permease component DCE93_01065 PF02653 Branched-chain amino acid transport system / permease component DCE93_01070 PF00005 ABC transporter DCE93_01075 PF00356 Bacterial regulatory proteins, lacI family DCE93_01080 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DCE93_01080 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DCE93_01085 PF07690 Major Facilitator Superfamily DCE93_01105 PF03099 Biotin/lipoate A/B protein ligase family DCE93_01115 PF01555 DNA methylase DCE93_01120 PF00356 Bacterial regulatory proteins, lacI family DCE93_01125 PF00232 Glycosyl hydrolase family 1 DCE93_01130 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_01135 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_01145 PF02557 D-alanyl-D-alanine carboxypeptidase DCE93_01150 PF07690 Major Facilitator Superfamily DCE93_01160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DCE93_01160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DCE93_01160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DCE93_01160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DCE93_01165 PF04286 Protein of unknown function (DUF445) DCE93_01170 PF00800 Prephenate dehydratase DCE93_01180 PF00781 Diacylglycerol kinase catalytic domain DCE93_01185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCE93_01185 PF02403 Seryl-tRNA synthetase N-terminal domain DCE93_01195 PF03816 Cell envelope-related transcriptional attenuator domain DCE93_01195 PF13399 LytR cell envelope-related transcriptional attenuator DCE93_01205 PF13399 LytR cell envelope-related transcriptional attenuator DCE93_01205 PF03816 Cell envelope-related transcriptional attenuator domain DCE93_01305 PF05067 Manganese containing catalase DCE93_01320 PF02735 Ku70/Ku80 beta-barrel domain DCE93_01325 PF13298 DNA polymerase Ligase (LigD) DCE93_01325 PF01068 ATP dependent DNA ligase domain DCE93_01325 PF04679 ATP dependent DNA ligase C terminal region DCE93_01380 PF00072 Response regulator receiver domain DCE93_01380 PF00486 Transcriptional regulatory protein, C terminal DCE93_01390 PF14437 MafB19-like deaminase DCE93_01395 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DCE93_01395 PF00117 Glutamine amidotransferase class-I DCE93_01400 PF16916 Dimerisation domain of Zinc Transporter DCE93_01400 PF01545 Cation efflux family DCE93_01405 PF14748 Pyrroline-5-carboxylate reductase dimerisation DCE93_01405 PF03807 NADP oxidoreductase coenzyme F420-dependent DCE93_01410 PF00728 Glycosyl hydrolase family 20, catalytic domain DCE93_01410 PF02838 Glycosyl hydrolase family 20, domain 2 DCE93_01410 PF07691 PA14 domain DCE93_01415 PF05958 tRNA (Uracil-5-)-methyltransferase DCE93_01420 PF00486 Transcriptional regulatory protein, C terminal DCE93_01420 PF00072 Response regulator receiver domain DCE93_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_01425 PF02702 Osmosensitive K+ channel His kinase sensor domain DCE93_01425 PF13493 Domain of unknown function (DUF4118) DCE93_01430 PF02669 K+-transporting ATPase, c chain DCE93_01440 PF03814 Potassium-transporting ATPase A subunit DCE93_01460 PF02080 TrkA-C domain DCE93_01460 PF02254 TrkA-N domain DCE93_01465 PF02386 Cation transport protein DCE93_01470 PF01022 Bacterial regulatory protein, arsR family DCE93_01475 PF00873 AcrB/AcrD/AcrF family DCE93_01500 PF03781 Sulfatase-modifying factor enzyme 1 DCE93_01505 PF00152 tRNA synthetases class II (D, K and N) DCE93_01505 PF01336 OB-fold nucleic acid binding domain DCE93_01510 PF00300 Histidine phosphatase superfamily (branch 1) DCE93_01515 PF00085 Thioredoxin DCE93_01520 PF02683 Cytochrome C biogenesis protein transmembrane region DCE93_01525 PF05140 ResB-like family DCE93_01530 PF01578 Cytochrome C assembly protein DCE93_01535 PF00196 Bacterial regulatory proteins, luxR family DCE93_01545 PF07690 Major Facilitator Superfamily DCE93_01550 PF09278 MerR, DNA binding DCE93_01550 PF00376 MerR family regulatory protein DCE93_01555 PF18374 Enolase N-terminal domain-like DCE93_01555 PF13378 Enolase C-terminal domain-like DCE93_01560 PF00378 Enoyl-CoA hydratase/isomerase DCE93_01565 PF00501 AMP-binding enzyme DCE93_01565 PF13193 AMP-binding enzyme C-terminal domain DCE93_01570 PF01040 UbiA prenyltransferase family DCE93_01585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DCE93_01590 PF03976 Polyphosphate kinase 2 (PPK2) DCE93_01595 PF00425 chorismate binding enzyme DCE93_01600 PF01209 ubiE/COQ5 methyltransferase family DCE93_01605 PF00348 Polyprenyl synthetase DCE93_01610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_01630 PF00293 NUDIX domain DCE93_01635 PF04461 Protein of unknown function (DUF520) DCE93_01640 PF00356 Bacterial regulatory proteins, lacI family DCE93_01655 PF00459 Inositol monophosphatase family DCE93_01660 PF01551 Peptidase family M23 DCE93_01660 PF04225 Opacity-associated protein A LysM-like domain DCE93_01670 PF00128 Alpha amylase, catalytic domain DCE93_01675 PF13416 Bacterial extracellular solute-binding protein DCE93_01680 PF14785 Maltose transport system permease protein MalF P2 domain DCE93_01680 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_01685 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_01690 PF00128 Alpha amylase, catalytic domain DCE93_01690 PF02903 Alpha amylase, N-terminal ig-like domain DCE93_01690 PF16657 Maltogenic Amylase, C-terminal domain DCE93_01720 PF01212 Beta-eliminating lyase DCE93_01725 PF00324 Amino acid permease DCE93_01730 PF01042 Endoribonuclease L-PSP DCE93_01750 PF03880 DbpA RNA binding domain DCE93_01750 PF00270 DEAD/DEAH box helicase DCE93_01750 PF00271 Helicase conserved C-terminal domain DCE93_01760 PF17103 Stealth protein CR4, conserved region 4 DCE93_01760 PF11380 Stealth protein CR2, conserved region 2 DCE93_01760 PF17102 Stealth protein CR3, conserved region 3 DCE93_01760 PF00534 Glycosyl transferases group 1 DCE93_01760 PF17101 Stealth protein CR1, conserved region 1 DCE93_01770 PF00149 Calcineurin-like phosphoesterase DCE93_01775 PF13396 Phospholipase_D-nuclease N-terminal DCE93_01775 PF13091 PLD-like domain DCE93_01780 PF11380 Stealth protein CR2, conserved region 2 DCE93_01780 PF17102 Stealth protein CR3, conserved region 3 DCE93_01780 PF17103 Stealth protein CR4, conserved region 4 DCE93_01780 PF17101 Stealth protein CR1, conserved region 1 DCE93_01805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DCE93_01810 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_01815 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_01815 PF12911 N-terminal TM domain of oligopeptide transport permease C DCE93_01820 PF00005 ABC transporter DCE93_01820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DCE93_01825 PF00296 Luciferase-like monooxygenase DCE93_01840 PF00266 Aminotransferase class-V DCE93_01850 PF01758 Sodium Bile acid symporter family DCE93_01875 PF00232 Glycosyl hydrolase family 1 DCE93_01885 PF00202 Aminotransferase class-III DCE93_01890 PF00171 Aldehyde dehydrogenase family DCE93_01895 PF01593 Flavin containing amine oxidoreductase DCE93_01910 PF13452 N-terminal half of MaoC dehydratase DCE93_01920 PF01565 FAD binding domain DCE93_01920 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DCE93_01940 PF00196 Bacterial regulatory proteins, luxR family DCE93_01940 PF00072 Response regulator receiver domain DCE93_01950 PF00501 AMP-binding enzyme DCE93_01950 PF13193 AMP-binding enzyme C-terminal domain DCE93_01955 PF00196 Bacterial regulatory proteins, luxR family DCE93_01955 PF00072 Response regulator receiver domain DCE93_01960 PF07730 Histidine kinase DCE93_01970 PF00005 ABC transporter DCE93_01980 PF03466 LysR substrate binding domain DCE93_01980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCE93_01985 PF00155 Aminotransferase class I and II DCE93_01990 PF13286 Phosphohydrolase-associated domain DCE93_01990 PF01966 HD domain DCE93_02000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DCE93_02005 PF02357 Transcription termination factor nusG DCE93_02010 PF03946 Ribosomal protein L11, N-terminal domain DCE93_02010 PF00298 Ribosomal protein L11, RNA binding domain DCE93_02015 PF00687 Ribosomal protein L1p/L10e family DCE93_02025 PF00708 Acylphosphatase DCE93_02035 PF00171 Aldehyde dehydrogenase family DCE93_02045 PF07729 FCD domain DCE93_02045 PF00392 Bacterial regulatory proteins, gntR family DCE93_02050 PF02515 CoA-transferase family III DCE93_02060 PF00171 Aldehyde dehydrogenase family DCE93_02070 PF00497 Bacterial extracellular solute-binding proteins, family 3 DCE93_02075 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_02080 PF00005 ABC transporter DCE93_02090 PF01593 Flavin containing amine oxidoreductase DCE93_02100 PF00202 Aminotransferase class-III DCE93_02105 PF00171 Aldehyde dehydrogenase family DCE93_02120 PF01638 HxlR-like helix-turn-helix DCE93_02130 PF01266 FAD dependent oxidoreductase DCE93_02145 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DCE93_02150 PF00463 Isocitrate lyase family DCE93_02165 PF07690 Major Facilitator Superfamily DCE93_02175 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_02175 PF00107 Zinc-binding dehydrogenase DCE93_02190 PF00480 ROK family DCE93_02195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DCE93_02195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DCE93_02200 PF00005 ABC transporter DCE93_02205 PF02653 Branched-chain amino acid transport system / permease component DCE93_02220 PF01261 Xylose isomerase-like TIM barrel DCE93_02240 PF00072 Response regulator receiver domain DCE93_02240 PF00196 Bacterial regulatory proteins, luxR family DCE93_02250 PF00072 Response regulator receiver domain DCE93_02250 PF00486 Transcriptional regulatory protein, C terminal DCE93_02255 PF00672 HAMP domain DCE93_02255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_02255 PF00512 His Kinase A (phospho-acceptor) domain DCE93_02265 PF07690 Major Facilitator Superfamily DCE93_02275 PF00466 Ribosomal protein L10 DCE93_02280 PF00542 Ribosomal protein L7/L12 C-terminal domain DCE93_02280 PF16320 Ribosomal protein L7/L12 dimerisation domain DCE93_02285 PF05656 Protein of unknown function (DUF805) DCE93_02295 PF07690 Major Facilitator Superfamily DCE93_02300 PF00356 Bacterial regulatory proteins, lacI family DCE93_02305 PF01547 Bacterial extracellular solute-binding protein DCE93_02310 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_02315 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_02315 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_02325 PF00664 ABC transporter transmembrane region DCE93_02325 PF00005 ABC transporter DCE93_02340 PF00291 Pyridoxal-phosphate dependent enzyme DCE93_02340 PF00571 CBS domain DCE93_02345 PF01053 Cys/Met metabolism PLP-dependent enzyme DCE93_02350 PF01145 SPFH domain / Band 7 family DCE93_02365 PF00248 Aldo/keto reductase family DCE93_02375 PF00356 Bacterial regulatory proteins, lacI family DCE93_02380 PF00005 ABC transporter DCE93_02385 PF02653 Branched-chain amino acid transport system / permease component DCE93_02390 PF13407 Periplasmic binding protein domain DCE93_02415 PF00462 Glutaredoxin DCE93_02420 PF07972 NrdI Flavodoxin like DCE93_02425 PF02867 Ribonucleotide reductase, barrel domain DCE93_02425 PF00317 Ribonucleotide reductase, all-alpha domain DCE93_02425 PF08343 Ribonucleotide reductase N-terminal DCE93_02430 PF00268 Ribonucleotide reductase, small chain DCE93_02455 PF03781 Sulfatase-modifying factor enzyme 1 DCE93_02480 PF02910 Fumarate reductase flavoprotein C-term DCE93_02480 PF00890 FAD binding domain DCE93_02485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCE93_02485 PF03466 LysR substrate binding domain DCE93_02495 PF11999 Protein of unknown function (DUF3494) DCE93_02545 PF01592 NifU-like N terminal domain DCE93_02550 PF00266 Aminotransferase class-V DCE93_02585 PF00296 Luciferase-like monooxygenase DCE93_02595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DCE93_02600 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_02605 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_02605 PF12911 N-terminal TM domain of oligopeptide transport permease C DCE93_02610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DCE93_02610 PF00005 ABC transporter DCE93_02615 PF01053 Cys/Met metabolism PLP-dependent enzyme DCE93_02620 PF00296 Luciferase-like monooxygenase DCE93_02625 PF03358 NADPH-dependent FMN reductase DCE93_02645 PF00248 Aldo/keto reductase family DCE93_02655 PF13443 Cro/C1-type HTH DNA-binding domain DCE93_02660 PF00202 Aminotransferase class-III DCE93_02675 PF12848 ABC transporter DCE93_02675 PF00005 ABC transporter DCE93_02685 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DCE93_02685 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DCE93_02695 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_02700 PF00005 ABC transporter DCE93_02705 PF01638 HxlR-like helix-turn-helix DCE93_02710 PF00561 alpha/beta hydrolase fold DCE93_02725 PF16197 Ketoacyl-synthetase C-terminal extension DCE93_02725 PF02801 Beta-ketoacyl synthase, C-terminal domain DCE93_02725 PF08659 KR domain DCE93_02725 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_02725 PF00698 Acyl transferase domain DCE93_02725 PF08990 Erythronolide synthase docking DCE93_02725 PF14765 Polyketide synthase dehydratase DCE93_02725 PF00550 Phosphopantetheine attachment site DCE93_02725 PF09277 Erythronolide synthase, docking DCE93_02725 PF00109 Beta-ketoacyl synthase, N-terminal domain DCE93_02730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DCE93_02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_02760 PF07730 Histidine kinase DCE93_02765 PF00072 Response regulator receiver domain DCE93_02765 PF00196 Bacterial regulatory proteins, luxR family DCE93_02795 PF08281 Sigma-70, region 4 DCE93_02795 PF04542 Sigma-70 region 2 DCE93_02835 PF03109 ABC1 family DCE93_02840 PF03551 Transcriptional regulator PadR-like family DCE93_02845 PF16363 GDP-mannose 4,6 dehydratase DCE93_02870 PF00004 ATPase family associated with various cellular activities (AAA) DCE93_02870 PF17871 AAA lid domain DCE93_02870 PF02861 Clp amino terminal domain, pathogenicity island component DCE93_02870 PF10431 C-terminal, D2-small domain, of ClpB protein DCE93_02870 PF07724 AAA domain (Cdc48 subfamily) DCE93_02880 PF00106 short chain dehydrogenase DCE93_02915 PF00293 NUDIX domain DCE93_02930 PF04675 DNA ligase N terminus DCE93_02930 PF01068 ATP dependent DNA ligase domain DCE93_02930 PF04679 ATP dependent DNA ligase C terminal region DCE93_02935 PF02909 Tetracyclin repressor-like, C-terminal domain DCE93_02935 PF00440 Bacterial regulatory proteins, tetR family DCE93_02965 PF13649 Methyltransferase domain DCE93_02970 PF00005 ABC transporter DCE93_02970 PF08402 TOBE domain DCE93_03000 PF06441 Epoxide hydrolase N terminus DCE93_03010 PF13847 Methyltransferase domain DCE93_03010 PF03551 Transcriptional regulator PadR-like family DCE93_03030 PF12697 Alpha/beta hydrolase family DCE93_03030 PF08241 Methyltransferase domain DCE93_03040 PF02146 Sir2 family DCE93_03070 PF01047 MarR family DCE93_03100 PF07690 Major Facilitator Superfamily DCE93_03105 PF01594 AI-2E family transporter DCE93_03110 PF13530 Sterol carrier protein domain DCE93_03110 PF17668 Acetyltransferase (GNAT) domain DCE93_03115 PF00356 Bacterial regulatory proteins, lacI family DCE93_03120 PF02595 Glycerate kinase family DCE93_03135 PF00512 His Kinase A (phospho-acceptor) domain DCE93_03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_03135 PF00672 HAMP domain DCE93_03140 PF00486 Transcriptional regulatory protein, C terminal DCE93_03140 PF00072 Response regulator receiver domain DCE93_03145 PF00809 Pterin binding enzyme DCE93_03155 PF00271 Helicase conserved C-terminal domain DCE93_03155 PF04851 Type III restriction enzyme, res subunit DCE93_03170 PF00313 'Cold-shock' DNA-binding domain DCE93_03175 PF11228 Protein of unknown function (DUF3027) DCE93_03185 PF00266 Aminotransferase class-V DCE93_03190 PF02742 Iron dependent repressor, metal binding and dimerisation domain DCE93_03190 PF18357 Diphteria toxin repressor SH3 domain DCE93_03190 PF01325 Iron dependent repressor, N-terminal DNA binding domain DCE93_03195 PF08239 Bacterial SH3 domain DCE93_03195 PF00877 NlpC/P60 family DCE93_03195 PF01476 LysM domain DCE93_03220 PF00271 Helicase conserved C-terminal domain DCE93_03220 PF12419 SNF2 Helicase protein DCE93_03220 PF00176 SNF2 family N-terminal domain DCE93_03225 PF06736 Protein of unknown function (DUF1211) DCE93_03235 PF04679 ATP dependent DNA ligase C terminal region DCE93_03235 PF01068 ATP dependent DNA ligase domain DCE93_03245 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DCE93_03245 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DCE93_03250 PF02583 Metal-sensitive transcriptional repressor DCE93_03270 PF01741 Large-conductance mechanosensitive channel, MscL DCE93_03285 PF00483 Nucleotidyl transferase DCE93_03290 PF13302 Acetyltransferase (GNAT) domain DCE93_03310 PF04909 Amidohydrolase DCE93_03315 PF01557 Fumarylacetoacetate (FAA) hydrolase family DCE93_03335 PF01494 FAD binding domain DCE93_03340 PF02615 Malate/L-lactate dehydrogenase DCE93_03350 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_03355 PF00005 ABC transporter DCE93_03365 PF07690 Major Facilitator Superfamily DCE93_03385 PF00999 Sodium/hydrogen exchanger family DCE93_03385 PF02254 TrkA-N domain DCE93_03390 PF06826 Predicted Permease Membrane Region DCE93_03390 PF02080 TrkA-C domain DCE93_03395 PF02272 DHHA1 domain DCE93_03395 PF01411 tRNA synthetases class II (A) DCE93_03395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DCE93_03410 PF00248 Aldo/keto reductase family DCE93_03420 PF11898 Domain of unknown function (DUF3418) DCE93_03420 PF04408 Helicase associated domain (HA2) DCE93_03420 PF00271 Helicase conserved C-terminal domain DCE93_03420 PF00270 DEAD/DEAH box helicase DCE93_03420 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DCE93_03430 PF00248 Aldo/keto reductase family DCE93_03450 PF03190 Protein of unknown function, DUF255 DCE93_03470 PF17827 PrmC N-terminal domain DCE93_03470 PF05175 Methyltransferase small domain DCE93_03480 PF00684 DnaJ central domain DCE93_03480 PF00226 DnaJ domain DCE93_03480 PF01556 DnaJ C terminal domain DCE93_03485 PF02127 Aminopeptidase I zinc metalloprotease (M18) DCE93_03490 PF00999 Sodium/hydrogen exchanger family DCE93_03500 PF00581 Rhodanese-like domain DCE93_03505 PF03313 Serine dehydratase alpha chain DCE93_03505 PF03315 Serine dehydratase beta chain DCE93_03515 PF00942 Cellulose binding domain DCE93_03515 PF00759 Glycosyl hydrolase family 9 DCE93_03520 PF13380 CoA binding domain DCE93_03525 PF01053 Cys/Met metabolism PLP-dependent enzyme DCE93_03530 PF00857 Isochorismatase family DCE93_03535 PF03992 Antibiotic biosynthesis monooxygenase DCE93_03540 PF00893 Small Multidrug Resistance protein DCE93_03550 PF01381 Helix-turn-helix DCE93_03555 PF16197 Ketoacyl-synthetase C-terminal extension DCE93_03555 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_03555 PF00698 Acyl transferase domain DCE93_03555 PF08659 KR domain DCE93_03555 PF00550 Phosphopantetheine attachment site DCE93_03555 PF14765 Polyketide synthase dehydratase DCE93_03555 PF00109 Beta-ketoacyl synthase, N-terminal domain DCE93_03555 PF02801 Beta-ketoacyl synthase, C-terminal domain DCE93_03565 PF03601 Conserved hypothetical protein 698 DCE93_03570 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DCE93_03570 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase DCE93_03575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCE93_03580 PF00550 Phosphopantetheine attachment site DCE93_03580 PF14765 Polyketide synthase dehydratase DCE93_03580 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_03580 PF08990 Erythronolide synthase docking DCE93_03580 PF00698 Acyl transferase domain DCE93_03580 PF09277 Erythronolide synthase, docking DCE93_03580 PF00109 Beta-ketoacyl synthase, N-terminal domain DCE93_03580 PF02801 Beta-ketoacyl synthase, C-terminal domain DCE93_03580 PF08659 KR domain DCE93_03580 PF16197 Ketoacyl-synthetase C-terminal extension DCE93_03585 PF08264 Anticodon-binding domain of tRNA DCE93_03585 PF09334 tRNA synthetases class I (M) DCE93_03590 PF01026 TatD related DNase DCE93_03595 PF00398 Ribosomal RNA adenine dimethylase DCE93_03605 PF00288 GHMP kinases N terminal domain DCE93_03605 PF08544 GHMP kinases C terminal DCE93_03610 PF12848 ABC transporter DCE93_03610 PF00005 ABC transporter DCE93_03610 PF16326 ABC transporter C-terminal domain DCE93_03615 PF03180 NLPA lipoprotein DCE93_03620 PF00005 ABC transporter DCE93_03620 PF09383 NIL domain DCE93_03625 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_03640 PF12804 MobA-like NTP transferase domain DCE93_03640 PF00132 Bacterial transferase hexapeptide (six repeats) DCE93_03645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DCE93_03645 PF14572 Phosphoribosyl synthetase-associated domain DCE93_03650 PF13193 AMP-binding enzyme C-terminal domain DCE93_03650 PF00501 AMP-binding enzyme DCE93_03670 PF02656 Domain of unknown function (DUF202) DCE93_03675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DCE93_03675 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DCE93_03680 PF01386 Ribosomal L25p family DCE93_03680 PF14693 Ribosomal protein TL5, C-terminal domain DCE93_03685 PF01195 Peptidyl-tRNA hydrolase DCE93_03690 PF00075 RNase H DCE93_03695 PF00271 Helicase conserved C-terminal domain DCE93_03695 PF02559 CarD-like/TRCF domain DCE93_03695 PF03461 TRCF domain DCE93_03695 PF17757 UvrB interaction domain DCE93_03695 PF00270 DEAD/DEAH box helicase DCE93_03705 PF06965 Na+/H+ antiporter 1 DCE93_03710 PF03819 MazG nucleotide pyrophosphohydrolase domain DCE93_03715 PF13393 Histidyl-tRNA synthetase DCE93_03725 PF03952 Enolase, N-terminal domain DCE93_03725 PF00113 Enolase, C-terminal TIM barrel domain DCE93_03740 PF00082 Subtilase family DCE93_03760 PF02541 Ppx/GppA phosphatase family DCE93_03780 PF04030 D-arabinono-1,4-lactone oxidase DCE93_03780 PF01565 FAD binding domain DCE93_03790 PF00005 ABC transporter DCE93_03795 PF00440 Bacterial regulatory proteins, tetR family DCE93_03795 PF17926 Tetracyclin repressor-like, C-terminal domain DCE93_03800 PF04011 LemA family DCE93_03805 PF01435 Peptidase family M48 DCE93_03810 PF06224 Winged helix DNA-binding domain DCE93_03815 PF01594 AI-2E family transporter DCE93_03820 PF00291 Pyridoxal-phosphate dependent enzyme DCE93_03820 PF13291 ACT domain DCE93_03825 PF03449 Transcription elongation factor, N-terminal DCE93_03825 PF01272 Transcription elongation factor, GreA/GreB, C-term DCE93_03840 PF03006 Haemolysin-III related DCE93_03845 PF01255 Putative undecaprenyl diphosphate synthase DCE93_03855 PF02562 PhoH-like protein DCE93_03855 PF13638 PIN domain DCE93_03860 PF10415 Fumarase C C-terminus DCE93_03860 PF00206 Lyase DCE93_03865 PF00484 Carbonic anhydrase DCE93_03875 PF02609 Exonuclease VII small subunit DCE93_03880 PF13742 OB-fold nucleic acid binding domain DCE93_03880 PF02601 Exonuclease VII, large subunit DCE93_03885 PF02401 LytB protein DCE93_03895 PF01116 Fructose-bisphosphate aldolase class-II DCE93_03900 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DCE93_03905 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DCE93_03920 PF02646 RmuC family DCE93_03925 PF00929 Exonuclease DCE93_03925 PF01541 GIY-YIG catalytic domain DCE93_03930 PF08241 Methyltransferase domain DCE93_03935 PF06071 Protein of unknown function (DUF933) DCE93_03935 PF01926 50S ribosome-binding GTPase DCE93_03940 PF03466 LysR substrate binding domain DCE93_03940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCE93_03960 PF05532 CsbD-like DCE93_03970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DCE93_03970 PF06827 Zinc finger found in FPG and IleRS DCE93_03975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DCE93_03975 PF06827 Zinc finger found in FPG and IleRS DCE93_03980 PF00005 ABC transporter DCE93_03990 PF00117 Glutamine amidotransferase class-I DCE93_03990 PF00425 chorismate binding enzyme DCE93_03995 PF17827 PrmC N-terminal domain DCE93_03995 PF05175 Methyltransferase small domain DCE93_04000 PF00156 Phosphoribosyl transferase domain DCE93_04000 PF01738 Dienelactone hydrolase family DCE93_04010 PF07690 Major Facilitator Superfamily DCE93_04015 PF00266 Aminotransferase class-V DCE93_04020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DCE93_04020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DCE93_04025 PF02910 Fumarate reductase flavoprotein C-term DCE93_04025 PF00890 FAD binding domain DCE93_04030 PF02445 Quinolinate synthetase A protein DCE93_04045 PF01571 Aminomethyltransferase folate-binding domain DCE93_04045 PF08669 Glycine cleavage T-protein C-terminal barrel domain DCE93_04050 PF01597 Glycine cleavage H-protein DCE93_04055 PF02347 Glycine cleavage system P-protein DCE93_04065 PF04542 Sigma-70 region 2 DCE93_04065 PF04545 Sigma-70, region 4 DCE93_04070 PF13490 Putative zinc-finger DCE93_04095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DCE93_04105 PF12911 N-terminal TM domain of oligopeptide transport permease C DCE93_04105 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_04110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DCE93_04110 PF00005 ABC transporter DCE93_04120 PF01551 Peptidase family M23 DCE93_04120 PF08525 Opacity-associated protein A N-terminal motif DCE93_04120 PF01476 LysM domain DCE93_04125 PF00378 Enoyl-CoA hydratase/isomerase DCE93_04140 PF00037 4Fe-4S binding domain DCE93_04145 PF00155 Aminotransferase class I and II DCE93_04160 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DCE93_04160 PF14602 Hexapeptide repeat of succinyl-transferase DCE93_04165 PF07687 Peptidase dimerisation domain DCE93_04165 PF01546 Peptidase family M20/M25/M40 DCE93_04180 PF01596 O-methyltransferase DCE93_04185 PF02416 mttA/Hcf106 family DCE93_04190 PF00171 Aldehyde dehydrogenase family DCE93_04200 PF00282 Pyridoxal-dependent decarboxylase conserved domain DCE93_04215 PF10609 NUBPL iron-transfer P-loop NTPase DCE93_04215 PF01883 Iron-sulfur cluster assembly protein DCE93_04225 PF00571 CBS domain DCE93_04225 PF01769 Divalent cation transporter DCE93_04225 PF03448 MgtE intracellular N domain DCE93_04235 PF05195 Aminopeptidase P, N-terminal domain DCE93_04235 PF00557 Metallopeptidase family M24 DCE93_04250 PF00270 DEAD/DEAH box helicase DCE93_04250 PF00271 Helicase conserved C-terminal domain DCE93_04275 PF00570 HRDC domain DCE93_04275 PF13361 UvrD-like helicase C-terminal domain DCE93_04275 PF00580 UvrD/REP helicase N-terminal domain DCE93_04285 PF00293 NUDIX domain DCE93_04285 PF09297 NADH pyrophosphatase zinc ribbon domain DCE93_04285 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DCE93_04290 PF13361 UvrD-like helicase C-terminal domain DCE93_04290 PF00570 HRDC domain DCE93_04290 PF00580 UvrD/REP helicase N-terminal domain DCE93_04310 PF13180 PDZ domain DCE93_04310 PF05362 Lon protease (S16) C-terminal proteolytic domain DCE93_04315 PF03699 Uncharacterised protein family (UPF0182) DCE93_04325 PF00704 Glycosyl hydrolases family 18 DCE93_04325 PF00041 Fibronectin type III domain DCE93_04340 PF03364 Polyketide cyclase / dehydrase and lipid transport DCE93_04350 PF13823 Alcohol dehydrogenase GroES-associated DCE93_04350 PF00107 Zinc-binding dehydrogenase DCE93_04350 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_04360 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_04365 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_04375 PF01594 AI-2E family transporter DCE93_04385 PF00196 Bacterial regulatory proteins, luxR family DCE93_04385 PF17874 MalT-like TPR region DCE93_04395 PF07690 Major Facilitator Superfamily DCE93_04400 PF00795 Carbon-nitrogen hydrolase DCE93_04405 PF00155 Aminotransferase class I and II DCE93_04410 PF00595 PDZ domain DCE93_04410 PF13180 PDZ domain DCE93_04440 PF00005 ABC transporter DCE93_04445 PF01061 ABC-2 type transporter DCE93_04455 PF14602 Hexapeptide repeat of succinyl-transferase DCE93_04455 PF12804 MobA-like NTP transferase domain DCE93_04455 PF00132 Bacterial transferase hexapeptide (six repeats) DCE93_04460 PF00005 ABC transporter DCE93_04460 PF13732 Domain of unknown function (DUF4162) DCE93_04475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DCE93_04475 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DCE93_04480 PF01177 Asp/Glu/Hydantoin racemase DCE93_04485 PF01138 3' exoribonuclease family, domain 1 DCE93_04485 PF03725 3' exoribonuclease family, domain 2 DCE93_04490 PF01725 Ham1 family DCE93_04495 PF02467 Transcription factor WhiB DCE93_04505 PF00578 AhpC/TSA family DCE93_04510 PF03193 RsgA GTPase DCE93_04515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DCE93_04520 PF04542 Sigma-70 region 2 DCE93_04520 PF08281 Sigma-70, region 4 DCE93_04530 PF03176 MMPL family DCE93_04535 PF16078 2-oxoglutarate dehydrogenase N-terminus DCE93_04535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DCE93_04535 PF02779 Transketolase, pyrimidine binding domain DCE93_04535 PF00676 Dehydrogenase E1 component DCE93_04535 PF16870 2-oxoglutarate dehydrogenase C-terminal DCE93_04540 PF00478 IMP dehydrogenase / GMP reductase domain DCE93_04540 PF00571 CBS domain DCE93_04545 PF01595 Cyclin M transmembrane N-terminal domain DCE93_04545 PF00571 CBS domain DCE93_04545 PF03471 Transporter associated domain DCE93_04550 PF01595 Cyclin M transmembrane N-terminal domain DCE93_04550 PF00571 CBS domain DCE93_04560 PF13419 Haloacid dehalogenase-like hydrolase DCE93_04565 PF03853 YjeF-related protein N-terminus DCE93_04565 PF01256 Carbohydrate kinase DCE93_04580 PF01910 Thiamine-binding protein DCE93_04585 PF07690 Major Facilitator Superfamily DCE93_04605 PF00561 alpha/beta hydrolase fold DCE93_04610 PF01053 Cys/Met metabolism PLP-dependent enzyme DCE93_04620 PF00106 short chain dehydrogenase DCE93_04625 PF07885 Ion channel DCE93_04630 PF00156 Phosphoribosyl transferase domain DCE93_04635 PF03167 Uracil DNA glycosylase superfamily DCE93_04650 PF01425 Amidase DCE93_04655 PF00005 ABC transporter DCE93_04660 PF01497 Periplasmic binding protein DCE93_04665 PF01032 FecCD transport family DCE93_04670 PF08021 Siderophore-interacting FAD-binding domain DCE93_04670 PF04954 Siderophore-interacting protein DCE93_04680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DCE93_04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_04680 PF00403 Heavy-metal-associated domain DCE93_04685 PF00491 Arginase family DCE93_04690 PF04012 PspA/IM30 family DCE93_04695 PF04536 TPM domain DCE93_04705 PF08281 Sigma-70, region 4 DCE93_04705 PF04542 Sigma-70 region 2 DCE93_04725 PF03485 Arginyl tRNA synthetase N terminal domain DCE93_04725 PF00750 tRNA synthetases class I (R) DCE93_04725 PF05746 DALR anticodon binding domain DCE93_04735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DCE93_04735 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DCE93_04740 PF03447 Homoserine dehydrogenase, NAD binding domain DCE93_04740 PF00742 Homoserine dehydrogenase DCE93_04740 PF01842 ACT domain DCE93_04745 PF00291 Pyridoxal-phosphate dependent enzyme DCE93_04750 PF08544 GHMP kinases C terminal DCE93_04750 PF00288 GHMP kinases N terminal domain DCE93_04755 PF07498 Rho termination factor, N-terminal domain DCE93_04755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DCE93_04755 PF07497 Rho termination factor, RNA-binding domain DCE93_04755 PF07497 Rho termination factor, RNA-binding domain DCE93_04755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DCE93_04755 PF07498 Rho termination factor, N-terminal domain DCE93_04760 PF03462 PCRF domain DCE93_04760 PF00472 RF-1 domain DCE93_04765 PF00132 Bacterial transferase hexapeptide (six repeats) DCE93_04765 PF06426 Serine acetyltransferase, N-terminal DCE93_04770 PF00291 Pyridoxal-phosphate dependent enzyme DCE93_04775 PF17827 PrmC N-terminal domain DCE93_04775 PF13649 Methyltransferase domain DCE93_04780 PF13305 Tetracyclin repressor-like, C-terminal domain DCE93_04780 PF00440 Bacterial regulatory proteins, tetR family DCE93_04785 PF00005 ABC transporter DCE93_04785 PF13732 Domain of unknown function (DUF4162) DCE93_04795 PF01300 Telomere recombination DCE93_04800 PF00953 Glycosyl transferase family 4 DCE93_04810 PF00119 ATP synthase A chain DCE93_04815 PF00137 ATP synthase subunit C DCE93_04820 PF00430 ATP synthase B/B' CF(0) DCE93_04825 PF00213 ATP synthase delta (OSCP) subunit DCE93_04830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DCE93_04830 PF00306 ATP synthase alpha/beta chain, C terminal domain DCE93_04830 PF02874 ATP synthase alpha/beta family, beta-barrel domain DCE93_04835 PF00231 ATP synthase DCE93_04840 PF02874 ATP synthase alpha/beta family, beta-barrel domain DCE93_04840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DCE93_04845 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DCE93_04855 PF03883 Peroxide stress protein YaaA DCE93_04860 PF03352 Methyladenine glycosylase DCE93_04865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DCE93_04865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DCE93_04875 PF01266 FAD dependent oxidoreductase DCE93_04880 PF00202 Aminotransferase class-III DCE93_04895 PF00171 Aldehyde dehydrogenase family DCE93_04910 PF00069 Protein kinase domain DCE93_04910 PF13191 AAA ATPase domain DCE93_04920 PF17863 AAA lid domain DCE93_04920 PF07726 ATPase family associated with various cellular activities (AAA) DCE93_04940 PF12538 DNA transporter DCE93_04940 PF01580 FtsK/SpoIIIE family DCE93_04950 PF08402 TOBE domain DCE93_04950 PF00005 ABC transporter DCE93_04955 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_04960 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_04970 PF00202 Aminotransferase class-III DCE93_04985 PF00501 AMP-binding enzyme DCE93_04985 PF01553 Acyltransferase DCE93_04995 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DCE93_04995 PF13288 DXP reductoisomerase C-terminal domain DCE93_04995 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DCE93_05000 PF02163 Peptidase family M50 DCE93_05000 PF17820 PDZ domain DCE93_05005 PF07730 Histidine kinase DCE93_05010 PF00072 Response regulator receiver domain DCE93_05010 PF00196 Bacterial regulatory proteins, luxR family DCE93_05025 PF02803 Thiolase, C-terminal domain DCE93_05025 PF00108 Thiolase, N-terminal domain DCE93_05035 PF00005 ABC transporter DCE93_05035 PF12399 Branched-chain amino acid ATP-binding cassette transporter DCE93_05040 PF00005 ABC transporter DCE93_05045 PF02653 Branched-chain amino acid transport system / permease component DCE93_05055 PF00501 AMP-binding enzyme DCE93_05055 PF13193 AMP-binding enzyme C-terminal domain DCE93_05070 PF00561 alpha/beta hydrolase fold DCE93_05075 PF01144 Coenzyme A transferase DCE93_05080 PF01144 Coenzyme A transferase DCE93_05085 PF00561 alpha/beta hydrolase fold DCE93_05105 PF04551 GcpE protein DCE93_05120 PF03129 Anticodon binding domain DCE93_05120 PF04073 Aminoacyl-tRNA editing domain DCE93_05120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCE93_05130 PF08529 NusA N-terminal domain DCE93_05130 PF13184 NusA-like KH domain DCE93_05140 PF00009 Elongation factor Tu GTP binding domain DCE93_05140 PF04760 Translation initiation factor IF-2, N-terminal region DCE93_05140 PF11987 Translation-initiation factor 2 DCE93_05145 PF02033 Ribosome-binding factor A DCE93_05165 PF08546 Ketopantoate reductase PanE/ApbA C terminal DCE93_05165 PF02558 Ketopantoate reductase PanE/ApbA DCE93_05170 PF09142 tRNA Pseudouridine synthase II, C terminal DCE93_05170 PF16198 tRNA pseudouridylate synthase B C-terminal domain DCE93_05170 PF01509 TruB family pseudouridylate synthase (N terminal domain) DCE93_05185 PF06574 FAD synthetase DCE93_05185 PF01687 Riboflavin kinase DCE93_05190 PF07690 Major Facilitator Superfamily DCE93_05195 PF04198 Putative sugar-binding domain DCE93_05200 PF01791 DeoC/LacD family aldolase DCE93_05205 PF00171 Aldehyde dehydrogenase family DCE93_05210 PF00171 Aldehyde dehydrogenase family DCE93_05220 PF13460 NAD(P)H-binding DCE93_05220 PF11066 Protein of unknown function (DUF2867) DCE93_05225 PF01661 Macro domain DCE93_05230 PF02583 Metal-sensitive transcriptional repressor DCE93_05235 PF00403 Heavy-metal-associated domain DCE93_05250 PF04434 SWIM zinc finger DCE93_05250 PF00176 SNF2 family N-terminal domain DCE93_05250 PF00271 Helicase conserved C-terminal domain DCE93_05255 PF00365 Phosphofructokinase DCE93_05260 PF00293 NUDIX domain DCE93_05265 PF01384 Phosphate transporter family DCE93_05275 PF00860 Permease family DCE93_05280 PF00860 Permease family DCE93_05290 PF00356 Bacterial regulatory proteins, lacI family DCE93_05295 PF00206 Lyase DCE93_05295 PF10415 Fumarase C C-terminus DCE93_05300 PF01557 Fumarylacetoacetate (FAA) hydrolase family DCE93_05310 PF06029 AlkA N-terminal domain DCE93_05310 PF00730 HhH-GPD superfamily base excision DNA repair protein DCE93_05310 PF12833 Helix-turn-helix domain DCE93_05310 PF02805 Metal binding domain of Ada DCE93_05315 PF02913 FAD linked oxidases, C-terminal domain DCE93_05315 PF01565 FAD binding domain DCE93_05330 PF00171 Aldehyde dehydrogenase family DCE93_05340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DCE93_05355 PF02868 Thermolysin metallopeptidase, alpha-helical domain DCE93_05355 PF01447 Thermolysin metallopeptidase, catalytic domain DCE93_05355 PF16485 Protealysin propeptide DCE93_05370 PF04343 Protein of unknown function, DUF488 DCE93_05380 PF00550 Phosphopantetheine attachment site DCE93_05380 PF02801 Beta-ketoacyl synthase, C-terminal domain DCE93_05380 PF14765 Polyketide synthase dehydratase DCE93_05380 PF08659 KR domain DCE93_05380 PF00109 Beta-ketoacyl synthase, N-terminal domain DCE93_05380 PF16197 Ketoacyl-synthetase C-terminal extension DCE93_05380 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_05380 PF00698 Acyl transferase domain DCE93_05380 PF00107 Zinc-binding dehydrogenase DCE93_05385 PF00312 Ribosomal protein S15 DCE93_05400 PF01053 Cys/Met metabolism PLP-dependent enzyme DCE93_05405 PF00296 Luciferase-like monooxygenase DCE93_05415 PF00085 Thioredoxin DCE93_05425 PF00535 Glycosyl transferase family 2 DCE93_05430 PF02225 PA domain DCE93_05430 PF04389 Peptidase family M28 DCE93_05470 PF00534 Glycosyl transferases group 1 DCE93_05470 PF13439 Glycosyltransferase Family 4 DCE93_05475 PF17227 Family of unknown function (DUF5302) DCE93_05480 PF00575 S1 RNA binding domain DCE93_05480 PF01138 3' exoribonuclease family, domain 1 DCE93_05480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DCE93_05480 PF00013 KH domain DCE93_05500 PF00676 Dehydrogenase E1 component DCE93_05505 PF02779 Transketolase, pyrimidine binding domain DCE93_05505 PF02780 Transketolase, C-terminal domain DCE93_05510 PF02817 e3 binding domain DCE93_05510 PF00364 Biotin-requiring enzyme DCE93_05510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DCE93_05515 PF01329 Pterin 4 alpha carbinolamine dehydratase DCE93_05525 PF00440 Bacterial regulatory proteins, tetR family DCE93_05530 PF01039 Carboxyl transferase domain DCE93_05535 PF00753 Metallo-beta-lactamase superfamily DCE93_05540 PF02909 Tetracyclin repressor-like, C-terminal domain DCE93_05540 PF00440 Bacterial regulatory proteins, tetR family DCE93_05545 PF00364 Biotin-requiring enzyme DCE93_05545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCE93_05545 PF00289 Biotin carboxylase, N-terminal domain DCE93_05545 PF02785 Biotin carboxylase C-terminal domain DCE93_05550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DCE93_05550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DCE93_05550 PF02770 Acyl-CoA dehydrogenase, middle domain DCE93_05560 PF03328 HpcH/HpaI aldolase/citrate lyase family DCE93_05565 PF00248 Aldo/keto reductase family DCE93_05570 PF05193 Peptidase M16 inactive domain DCE93_05570 PF00675 Insulinase (Peptidase family M16) DCE93_05585 PF05173 Dihydrodipicolinate reductase, C-terminus DCE93_05585 PF01113 Dihydrodipicolinate reductase, N-terminus DCE93_05595 PF01370 NAD dependent epimerase/dehydratase family DCE93_05595 PF08338 Domain of unknown function (DUF1731) DCE93_05615 PF00303 Thymidylate synthase DCE93_05620 PF00186 Dihydrofolate reductase DCE93_05635 PF00701 Dihydrodipicolinate synthetase family DCE93_05640 PF17770 Ribonuclease J C-terminal domain DCE93_05640 PF12706 Beta-lactamase superfamily domain DCE93_05640 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DCE93_05655 PF00005 ABC transporter DCE93_05655 PF02687 FtsX-like permease family DCE93_05655 PF12704 MacB-like periplasmic core domain DCE93_05660 PF12704 MacB-like periplasmic core domain DCE93_05660 PF02687 FtsX-like permease family DCE93_05670 PF01580 FtsK/SpoIIIE family DCE93_05670 PF09397 Ftsk gamma domain DCE93_05670 PF17854 FtsK alpha domain DCE93_05680 PF02464 Competence-damaged protein DCE93_05680 PF00994 Probable molybdopterin binding domain DCE93_05680 PF18146 Damage-inducible protein CinA KH domain DCE93_05695 PF00154 recA bacterial DNA recombination protein DCE93_05705 PF04055 Radical SAM superfamily DCE93_05705 PF00919 Uncharacterized protein family UPF0004 DCE93_05715 PF01678 Diaminopimelate epimerase DCE93_05720 PF17827 PrmC N-terminal domain DCE93_05720 PF13847 Methyltransferase domain DCE93_05725 PF13167 GTP-binding GTPase N-terminal DCE93_05725 PF16360 GTP-binding GTPase Middle Region DCE93_05725 PF01926 50S ribosome-binding GTPase DCE93_05730 PF02219 Methylenetetrahydrofolate reductase DCE93_05735 PF01717 Cobalamin-independent synthase, Catalytic domain DCE93_05735 PF08267 Cobalamin-independent synthase, N-terminal domain DCE93_05740 PF12697 Alpha/beta hydrolase family DCE93_05745 PF01726 LexA DNA binding domain DCE93_05745 PF00717 Peptidase S24-like DCE93_05755 PF00155 Aminotransferase class I and II DCE93_05760 PF00475 Imidazoleglycerol-phosphate dehydratase DCE93_05765 PF00117 Glutamine amidotransferase class-I DCE93_05770 PF00977 Histidine biosynthesis protein DCE93_05780 PF00350 Dynamin family DCE93_05785 PF00350 Dynamin family DCE93_05800 PF00012 Hsp70 protein DCE93_05805 PF08386 TAP-like protein DCE93_05805 PF00561 alpha/beta hydrolase fold DCE93_05815 PF08494 DEAD/H associated DCE93_05815 PF00270 DEAD/DEAH box helicase DCE93_05815 PF00271 Helicase conserved C-terminal domain DCE93_05820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DCE93_05820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DCE93_05830 PF00707 Translation initiation factor IF-3, C-terminal domain DCE93_05830 PF05198 Translation initiation factor IF-3, N-terminal domain DCE93_05835 PF01632 Ribosomal protein L35 DCE93_05840 PF00453 Ribosomal protein L20 DCE93_05845 PF00588 SpoU rRNA Methylase family DCE93_05845 PF08032 RNA 2'-O ribose methyltransferase substrate binding DCE93_05850 PF00005 ABC transporter DCE93_05855 PF00497 Bacterial extracellular solute-binding proteins, family 3 DCE93_05860 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_05865 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_05870 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DCE93_05870 PF01409 tRNA synthetases class II core domain (F) DCE93_05875 PF01588 Putative tRNA binding domain DCE93_05875 PF03484 tRNA synthetase B5 domain DCE93_05875 PF03483 B3/4 domain DCE93_05875 PF03147 Ferredoxin-fold anticodon binding domain DCE93_05875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DCE93_05880 PF02774 Semialdehyde dehydrogenase, dimerisation domain DCE93_05880 PF01118 Semialdehyde dehydrogenase, NAD binding domain DCE93_05885 PF01960 ArgJ family DCE93_05890 PF00696 Amino acid kinase family DCE93_05895 PF00202 Aminotransferase class-III DCE93_05900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DCE93_05900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DCE93_05905 PF14698 Argininosuccinate lyase C-terminal DCE93_05905 PF00206 Lyase DCE93_05910 PF02245 Methylpurine-DNA glycosylase (MPG) DCE93_05925 PF00579 tRNA synthetases class I (W and Y) DCE93_05965 PF01728 FtsJ-like methyltransferase DCE93_05965 PF01479 S4 domain DCE93_05970 PF01513 ATP-NAD kinase DCE93_05975 PF02463 RecF/RecN/SMC N terminal domain DCE93_05980 PF06418 CTP synthase N-terminus DCE93_05980 PF00117 Glutamine amidotransferase class-I DCE93_05985 PF00293 NUDIX domain DCE93_05990 PF02899 Phage integrase, N-terminal SAM-like domain DCE93_05990 PF00589 Phage integrase family DCE93_05995 PF13614 AAA domain DCE93_06000 PF02616 Segregation and condensation protein ScpA DCE93_06005 PF04079 Segregation and condensation complex subunit ScpB DCE93_06010 PF00849 RNA pseudouridylate synthase DCE93_06010 PF01479 S4 domain DCE93_06015 PF02153 Prephenate dehydrogenase DCE93_06020 PF02224 Cytidylate kinase DCE93_06025 PF01926 50S ribosome-binding GTPase DCE93_06025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DCE93_06060 PF00205 Thiamine pyrophosphate enzyme, central domain DCE93_06060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DCE93_06060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCE93_06095 PF09347 Domain of unknown function (DUF1989) DCE93_06100 PF00289 Biotin carboxylase, N-terminal domain DCE93_06100 PF00364 Biotin-requiring enzyme DCE93_06100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCE93_06100 PF02785 Biotin carboxylase C-terminal domain DCE93_06105 PF01425 Amidase DCE93_06110 PF02909 Tetracyclin repressor-like, C-terminal domain DCE93_06110 PF00440 Bacterial regulatory proteins, tetR family DCE93_06120 PF00072 Response regulator receiver domain DCE93_06120 PF00196 Bacterial regulatory proteins, luxR family DCE93_06150 PF00106 short chain dehydrogenase DCE93_06160 PF01272 Transcription elongation factor, GreA/GreB, C-term DCE93_06160 PF03449 Transcription elongation factor, N-terminal DCE93_06165 PF00135 Carboxylesterase family DCE93_06170 PF01625 Peptide methionine sulfoxide reductase DCE93_06175 PF01641 SelR domain DCE93_06190 PF04075 F420H(2)-dependent quinone reductase DCE93_06205 PF04679 ATP dependent DNA ligase C terminal region DCE93_06205 PF13298 DNA polymerase Ligase (LigD) DCE93_06205 PF01068 ATP dependent DNA ligase domain DCE93_06210 PF04607 Region found in RelA / SpoT proteins DCE93_06215 PF00753 Metallo-beta-lactamase superfamily DCE93_06225 PF02810 SEC-C motif DCE93_06245 PF00293 NUDIX domain DCE93_06260 PF00498 FHA domain DCE93_06265 PF00376 MerR family regulatory protein DCE93_06270 PF13411 MerR HTH family regulatory protein DCE93_06275 PF13614 AAA domain DCE93_06280 PF02785 Biotin carboxylase C-terminal domain DCE93_06280 PF00682 HMGL-like DCE93_06280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCE93_06280 PF00364 Biotin-requiring enzyme DCE93_06280 PF00289 Biotin carboxylase, N-terminal domain DCE93_06280 PF02436 Conserved carboxylase domain DCE93_06285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DCE93_06290 PF01327 Polypeptide deformylase DCE93_06295 PF00501 AMP-binding enzyme DCE93_06300 PF00480 ROK family DCE93_06305 PF01553 Acyltransferase DCE93_06310 PF01474 Class-II DAHP synthetase family DCE93_06315 PF00069 Protein kinase domain DCE93_06315 PF03793 PASTA domain DCE93_06320 PF05257 CHAP domain DCE93_06320 PF01476 LysM domain DCE93_06330 PF00348 Polyprenyl synthetase DCE93_06340 PF02381 MraZ protein, putative antitoxin-like DCE93_06345 PF01795 MraW methylase family DCE93_06355 PF00905 Penicillin binding protein transpeptidase domain DCE93_06355 PF03717 Penicillin-binding Protein dimerisation domain DCE93_06360 PF08245 Mur ligase middle domain DCE93_06360 PF01225 Mur ligase family, catalytic domain DCE93_06360 PF02875 Mur ligase family, glutamate ligase domain DCE93_06365 PF02875 Mur ligase family, glutamate ligase domain DCE93_06365 PF01225 Mur ligase family, catalytic domain DCE93_06365 PF08245 Mur ligase middle domain DCE93_06370 PF00953 Glycosyl transferase family 4 DCE93_06375 PF08245 Mur ligase middle domain DCE93_06375 PF02875 Mur ligase family, glutamate ligase domain DCE93_06380 PF01098 Cell cycle protein DCE93_06385 PF04101 Glycosyltransferase family 28 C-terminal domain DCE93_06385 PF03033 Glycosyltransferase family 28 N-terminal domain DCE93_06390 PF01225 Mur ligase family, catalytic domain DCE93_06390 PF02875 Mur ligase family, glutamate ligase domain DCE93_06390 PF08245 Mur ligase middle domain DCE93_06400 PF00091 Tubulin/FtsZ family, GTPase domain DCE93_06400 PF12327 FtsZ family, C-terminal domain DCE93_06405 PF01168 Alanine racemase, N-terminal domain DCE93_06410 PF04472 Cell division protein SepF DCE93_06420 PF05103 DivIVA protein DCE93_06425 PF01252 Signal peptidase (SPase) II DCE93_06430 PF00849 RNA pseudouridylate synthase DCE93_06435 PF14579 Helix-hairpin-helix motif DCE93_06435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DCE93_06435 PF07733 Bacterial DNA polymerase III alpha NTPase domain DCE93_06435 PF02811 PHP domain DCE93_06440 PF00815 Histidinol dehydrogenase DCE93_06445 PF03477 ATP cone domain DCE93_06450 PF01180 Dihydroorotate dehydrogenase DCE93_06460 PF00440 Bacterial regulatory proteins, tetR family DCE93_06465 PF00571 CBS domain DCE93_06465 PF00005 ABC transporter DCE93_06470 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_06475 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_06480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DCE93_06495 PF03965 Penicillinase repressor DCE93_06500 PF01654 Cytochrome bd terminal oxidase subunit I DCE93_06505 PF02322 Cytochrome bd terminal oxidase subunit II DCE93_06510 PF00005 ABC transporter DCE93_06510 PF00664 ABC transporter transmembrane region DCE93_06515 PF00664 ABC transporter transmembrane region DCE93_06515 PF00005 ABC transporter DCE93_06520 PF00117 Glutamine amidotransferase class-I DCE93_06520 PF00425 chorismate binding enzyme DCE93_06520 PF04715 Anthranilate synthase component I, N terminal region DCE93_06525 PF00133 tRNA synthetases class I (I, L, M and V) DCE93_06525 PF13603 Leucyl-tRNA synthetase, Domain 2 DCE93_06525 PF09334 tRNA synthetases class I (M) DCE93_06525 PF08264 Anticodon-binding domain of tRNA DCE93_06550 PF00156 Phosphoribosyl transferase domain DCE93_06600 PF01649 Ribosomal protein S20 DCE93_06610 PF00072 Response regulator receiver domain DCE93_06610 PF00196 Bacterial regulatory proteins, luxR family DCE93_06615 PF07730 Histidine kinase DCE93_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_06620 PF06421 GTP-binding protein LepA C-terminus DCE93_06620 PF00009 Elongation factor Tu GTP binding domain DCE93_06620 PF00679 Elongation factor G C-terminus DCE93_06625 PF09348 Domain of unknown function (DUF1990) DCE93_06630 PF04055 Radical SAM superfamily DCE93_06645 PF01628 HrcA protein C terminal domain DCE93_06650 PF00226 DnaJ domain DCE93_06650 PF01556 DnaJ C terminal domain DCE93_06650 PF00684 DnaJ central domain DCE93_06655 PF04452 RNA methyltransferase DCE93_06660 PF01230 HIT domain DCE93_06665 PF02562 PhoH-like protein DCE93_06670 PF02130 Uncharacterized protein family UPF0054 DCE93_06675 PF00571 CBS domain DCE93_06675 PF03471 Transporter associated domain DCE93_06675 PF01595 Cyclin M transmembrane N-terminal domain DCE93_06680 PF01926 50S ribosome-binding GTPase DCE93_06680 PF07650 KH domain DCE93_06685 PF07730 Histidine kinase DCE93_06690 PF00072 Response regulator receiver domain DCE93_06690 PF00196 Bacterial regulatory proteins, luxR family DCE93_06695 PF00005 ABC transporter DCE93_06700 PF02687 FtsX-like permease family DCE93_06700 PF12704 MacB-like periplasmic core domain DCE93_06705 PF00682 HMGL-like DCE93_06705 PF08502 LeuA allosteric (dimerisation) domain DCE93_06710 PF03458 UPF0126 domain DCE93_06715 PF02565 Recombination protein O C terminal DCE93_06715 PF11967 Recombination protein O N terminal DCE93_06720 PF01255 Putative undecaprenyl diphosphate synthase DCE93_06730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCE93_06730 PF04073 Aminoacyl-tRNA editing domain DCE93_06730 PF03129 Anticodon binding domain DCE93_06735 PF01207 Dihydrouridine synthase (Dus) DCE93_06740 PF13286 Phosphohydrolase-associated domain DCE93_06740 PF01966 HD domain DCE93_06745 PF13662 Toprim domain DCE93_06745 PF08278 DNA primase DnaG DnaB-binding DCE93_06745 PF10410 DnaB-helicase binding domain of primase DCE93_06745 PF01807 CHC2 zinc finger DCE93_06745 PF08275 DNA primase catalytic core, N-terminal domain DCE93_06755 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_06760 PF12911 N-terminal TM domain of oligopeptide transport permease C DCE93_06760 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_06765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DCE93_06765 PF00005 ABC transporter DCE93_06770 PF00005 ABC transporter DCE93_06770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DCE93_06775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DCE93_06785 PF01327 Polypeptide deformylase DCE93_06795 PF13439 Glycosyltransferase Family 4 DCE93_06795 PF00534 Glycosyl transferases group 1 DCE93_06805 PF02899 Phage integrase, N-terminal SAM-like domain DCE93_06805 PF00589 Phage integrase family DCE93_06810 PF00589 Phage integrase family DCE93_06810 PF14659 Phage integrase, N-terminal SAM-like domain DCE93_06840 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DCE93_06840 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DCE93_06855 PF12728 Helix-turn-helix domain DCE93_06855 PF02661 Fic/DOC family DCE93_06860 PF00472 RF-1 domain DCE93_06870 PF03793 PASTA domain DCE93_06870 PF00069 Protein kinase domain DCE93_06875 PF00005 ABC transporter DCE93_06915 PF12849 PBP superfamily domain DCE93_06920 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_06925 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_06955 PF00884 Sulfatase DCE93_06955 PF16347 Domain of unknown function (DUF4976) DCE93_06975 PF01594 AI-2E family transporter DCE93_06990 PF17853 GGDEF-like domain DCE93_06990 PF07905 Purine catabolism regulatory protein-like family DCE93_06990 PF13556 PucR C-terminal helix-turn-helix domain DCE93_07005 PF10011 Predicted membrane protein (DUF2254) DCE93_07055 PF02801 Beta-ketoacyl synthase, C-terminal domain DCE93_07055 PF00109 Beta-ketoacyl synthase, N-terminal domain DCE93_07060 PF00550 Phosphopantetheine attachment site DCE93_07065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DCE93_07065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DCE93_07070 PF00698 Acyl transferase domain DCE93_07075 PF17853 GGDEF-like domain DCE93_07075 PF13556 PucR C-terminal helix-turn-helix domain DCE93_07080 PF00456 Transketolase, thiamine diphosphate binding domain DCE93_07080 PF17831 Pyruvate dehydrogenase E1 component middle domain DCE93_07085 PF00578 AhpC/TSA family DCE93_07105 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_07105 PF14759 Reductase C-terminal DCE93_07115 PF01784 NIF3 (NGG1p interacting factor 3) DCE93_07130 PF00480 ROK family DCE93_07135 PF00557 Metallopeptidase family M24 DCE93_07145 PF02548 Ketopantoate hydroxymethyltransferase DCE93_07150 PF03951 Glutamine synthetase, beta-Grasp domain DCE93_07150 PF00120 Glutamine synthetase, catalytic domain DCE93_07155 PF08335 GlnD PII-uridylyltransferase DCE93_07155 PF03710 Glutamate-ammonia ligase adenylyltransferase DCE93_07160 PF00120 Glutamine synthetase, catalytic domain DCE93_07160 PF03951 Glutamine synthetase, beta-Grasp domain DCE93_07175 PF04055 Radical SAM superfamily DCE93_07175 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DCE93_07180 PF03099 Biotin/lipoate A/B protein ligase family DCE93_07190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DCE93_07190 PF00364 Biotin-requiring enzyme DCE93_07190 PF02817 e3 binding domain DCE93_07195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_07195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DCE93_07200 PF02789 Cytosol aminopeptidase family, N-terminal domain DCE93_07200 PF00883 Cytosol aminopeptidase family, catalytic domain DCE93_07210 PF00140 Sigma-70 factor, region 1.2 DCE93_07210 PF04542 Sigma-70 region 2 DCE93_07210 PF04539 Sigma-70 region 3 DCE93_07210 PF04545 Sigma-70, region 4 DCE93_07230 PF00204 DNA gyrase B DCE93_07230 PF01751 Toprim domain DCE93_07230 PF00986 DNA gyrase B subunit, carboxyl terminus DCE93_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_07235 PF03989 DNA gyrase C-terminal domain, beta-propeller DCE93_07235 PF00521 DNA gyrase/topoisomerase IV, subunit A DCE93_07245 PF11241 Protein of unknown function (DUF3043) DCE93_07250 PF07687 Peptidase dimerisation domain DCE93_07250 PF01546 Peptidase family M20/M25/M40 DCE93_07255 PF01521 Iron-sulphur cluster biosynthesis DCE93_07260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DCE93_07265 PF00115 Cytochrome C and Quinol oxidase polypeptide I DCE93_07270 PF12270 Cytochrome c oxidase subunit IV DCE93_07280 PF13649 Methyltransferase domain DCE93_07285 PF13631 Cytochrome b(N-terminal)/b6/petB DCE93_07290 PF00355 Rieske [2Fe-2S] domain DCE93_07295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DCE93_07295 PF00034 Cytochrome c DCE93_07300 PF00510 Cytochrome c oxidase subunit III DCE93_07305 PF00591 Glycosyl transferase family, a/b domain DCE93_07305 PF02885 Glycosyl transferase family, helical bundle domain DCE93_07310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DCE93_07310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DCE93_07315 PF00230 Major intrinsic protein DCE93_07320 PF02733 Dak1 domain DCE93_07325 PF02734 DAK2 domain DCE93_07365 PF06441 Epoxide hydrolase N terminus DCE93_07380 PF07687 Peptidase dimerisation domain DCE93_07380 PF01546 Peptidase family M20/M25/M40 DCE93_07390 PF00106 short chain dehydrogenase DCE93_07400 PF01145 SPFH domain / Band 7 family DCE93_07410 PF13397 RNA polymerase-binding protein DCE93_07415 PF00535 Glycosyl transferase family 2 DCE93_07415 PF00795 Carbon-nitrogen hydrolase DCE93_07420 PF08148 DSHCT (NUC185) domain DCE93_07420 PF00270 DEAD/DEAH box helicase DCE93_07420 PF00271 Helicase conserved C-terminal domain DCE93_07425 PF00902 Sec-independent protein translocase protein (TatC) DCE93_07430 PF02416 mttA/Hcf106 family DCE93_07440 PF13280 WYL domain DCE93_07450 PF08704 tRNA methyltransferase complex GCD14 subunit DCE93_07465 PF02673 Bacitracin resistance protein BacA DCE93_07470 PF07687 Peptidase dimerisation domain DCE93_07470 PF01546 Peptidase family M20/M25/M40 DCE93_07490 PF07733 Bacterial DNA polymerase III alpha NTPase domain DCE93_07490 PF02811 PHP domain DCE93_07490 PF14579 Helix-hairpin-helix motif DCE93_07490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DCE93_07510 PF01037 Lrp/AsnC ligand binding domain DCE93_07510 PF13404 AsnC-type helix-turn-helix domain DCE93_07515 PF01053 Cys/Met metabolism PLP-dependent enzyme DCE93_07520 PF07690 Major Facilitator Superfamily DCE93_07525 PF04851 Type III restriction enzyme, res subunit DCE93_07535 PF07943 Penicillin-binding protein 5, C-terminal domain DCE93_07535 PF00768 D-alanyl-D-alanine carboxypeptidase DCE93_07540 PF00588 SpoU rRNA Methylase family DCE93_07545 PF02146 Sir2 family DCE93_07550 PF00300 Histidine phosphatase superfamily (branch 1) DCE93_07575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DCE93_07580 PF01197 Ribosomal protein L31 DCE93_07585 PF00005 ABC transporter DCE93_07590 PF00534 Glycosyl transferases group 1 DCE93_07590 PF13439 Glycosyltransferase Family 4 DCE93_07595 PF00483 Nucleotidyl transferase DCE93_07610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DCE93_07615 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DCE93_07620 PF13180 PDZ domain DCE93_07645 PF12848 ABC transporter DCE93_07645 PF16326 ABC transporter C-terminal domain DCE93_07645 PF00005 ABC transporter DCE93_07655 PF04264 YceI-like domain DCE93_07660 PF00933 Glycosyl hydrolase family 3 N terminal domain DCE93_07675 PF01037 Lrp/AsnC ligand binding domain DCE93_07680 PF00676 Dehydrogenase E1 component DCE93_07685 PF02779 Transketolase, pyrimidine binding domain DCE93_07685 PF02780 Transketolase, C-terminal domain DCE93_07690 PF00364 Biotin-requiring enzyme DCE93_07690 PF02817 e3 binding domain DCE93_07690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DCE93_07700 PF00255 Glutathione peroxidase DCE93_07740 PF01467 Cytidylyltransferase-like DCE93_07750 PF00171 Aldehyde dehydrogenase family DCE93_07755 PF00696 Amino acid kinase family DCE93_07760 PF01018 GTP1/OBG DCE93_07760 PF01926 50S ribosome-binding GTPase DCE93_07760 PF09269 Domain of unknown function (DUF1967) DCE93_07765 PF01016 Ribosomal L27 protein DCE93_07770 PF00829 Ribosomal prokaryotic L21 protein DCE93_07780 PF10150 Ribonuclease E/G family DCE93_07790 PF00334 Nucleoside diphosphate kinase DCE93_07800 PF08245 Mur ligase middle domain DCE93_07800 PF02875 Mur ligase family, glutamate ligase domain DCE93_07805 PF08264 Anticodon-binding domain of tRNA DCE93_07805 PF00133 tRNA synthetases class I (I, L, M and V) DCE93_07815 PF07690 Major Facilitator Superfamily DCE93_07815 PF00083 Sugar (and other) transporter DCE93_07820 PF00133 tRNA synthetases class I (I, L, M and V) DCE93_07820 PF08264 Anticodon-binding domain of tRNA DCE93_07835 PF01209 ubiE/COQ5 methyltransferase family DCE93_07840 PF01432 Peptidase family M3 DCE93_07845 PF01883 Iron-sulfur cluster assembly protein DCE93_07850 PF00005 ABC transporter DCE93_07860 PF01458 Uncharacterized protein family (UPF0051) DCE93_07865 PF01458 Uncharacterized protein family (UPF0051) DCE93_07875 PF01040 UbiA prenyltransferase family DCE93_07880 PF02779 Transketolase, pyrimidine binding domain DCE93_07880 PF02780 Transketolase, C-terminal domain DCE93_07880 PF00456 Transketolase, thiamine diphosphate binding domain DCE93_07885 PF00923 Transaldolase/Fructose-6-phosphate aldolase DCE93_07895 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DCE93_07895 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DCE93_07905 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DCE93_07915 PF03840 Preprotein translocase SecG subunit DCE93_07920 PF00121 Triosephosphate isomerase DCE93_07925 PF00162 Phosphoglycerate kinase DCE93_07930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DCE93_07930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DCE93_07935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DCE93_07935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DCE93_07940 PF02650 WhiA C-terminal HTH domain DCE93_07940 PF10298 WhiA N-terminal LAGLIDADG-like domain DCE93_07940 PF14527 WhiA LAGLIDADG-like domain DCE93_07945 PF03668 P-loop ATPase protein family DCE93_07950 PF01541 GIY-YIG catalytic domain DCE93_07950 PF08459 UvrC Helix-hairpin-helix N-terminal DCE93_07950 PF02151 UvrB/uvrC motif DCE93_07955 PF17755 UvrA DNA-binding domain DCE93_07955 PF17760 UvrA interaction domain DCE93_07955 PF00005 ABC transporter DCE93_07960 PF12344 Ultra-violet resistance protein B DCE93_07960 PF04851 Type III restriction enzyme, res subunit DCE93_07960 PF00271 Helicase conserved C-terminal domain DCE93_07960 PF17757 UvrB interaction domain DCE93_07960 PF02151 UvrB/uvrC motif DCE93_07965 PF01121 Dephospho-CoA kinase DCE93_07970 PF00575 S1 RNA binding domain DCE93_07980 PF00476 DNA polymerase family A DCE93_07980 PF01367 5'-3' exonuclease, C-terminal SAM fold DCE93_07980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DCE93_07985 PF03861 ANTAR domain DCE93_07985 PF00072 Response regulator receiver domain DCE93_08000 PF00224 Pyruvate kinase, barrel domain DCE93_08000 PF02887 Pyruvate kinase, alpha/beta domain DCE93_08005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DCE93_08005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_08010 PF01645 Conserved region in glutamate synthase DCE93_08010 PF00310 Glutamine amidotransferases class-II DCE93_08010 PF04898 Glutamate synthase central domain DCE93_08010 PF01493 GXGXG motif DCE93_08015 PF01790 Prolipoprotein diacylglyceryl transferase DCE93_08020 PF00290 Tryptophan synthase alpha chain DCE93_08025 PF00291 Pyridoxal-phosphate dependent enzyme DCE93_08030 PF00218 Indole-3-glycerol phosphate synthase DCE93_08045 PF00425 chorismate binding enzyme DCE93_08045 PF04715 Anthranilate synthase component I, N terminal region DCE93_08050 PF01502 Phosphoribosyl-AMP cyclohydrolase DCE93_08055 PF00977 Histidine biosynthesis protein DCE93_08060 PF08029 HisG, C-terminal domain DCE93_08060 PF01634 ATP phosphoribosyltransferase DCE93_08065 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DCE93_08070 PF00834 Ribulose-phosphate 3 epimerase family DCE93_08075 PF01189 16S rRNA methyltransferase RsmB/F DCE93_08075 PF01029 NusB family DCE93_08080 PF02911 Formyl transferase, C-terminal domain DCE93_08080 PF00551 Formyl transferase DCE93_08085 PF17764 3′ DNA-binding domain (3′BD) DCE93_08090 PF00438 S-adenosylmethionine synthetase, N-terminal domain DCE93_08090 PF02773 S-adenosylmethionine synthetase, C-terminal domain DCE93_08090 PF02772 S-adenosylmethionine synthetase, central domain DCE93_08095 PF02441 Flavoprotein DCE93_08095 PF04127 DNA / pantothenate metabolism flavoprotein DCE93_08100 PF01192 RNA polymerase Rpb6 DCE93_08105 PF00625 Guanylate kinase DCE93_08110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DCE93_08115 PF02142 MGS-like domain DCE93_08115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCE93_08115 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DCE93_08120 PF00117 Glutamine amidotransferase class-I DCE93_08120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DCE93_08130 PF01979 Amidohydrolase family DCE93_08135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DCE93_08135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DCE93_08140 PF00156 Phosphoribosyl transferase domain DCE93_08150 PF01029 NusB family DCE93_08155 PF09285 Elongation factor P, C-terminal DCE93_08155 PF08207 Elongation factor P (EF-P) KOW-like domain DCE93_08155 PF01132 Elongation factor P (EF-P) OB domain DCE93_08160 PF01220 Dehydroquinase class II DCE93_08165 PF03009 Glycerophosphoryl diester phosphodiesterase family DCE93_08170 PF01761 3-dehydroquinate synthase DCE93_08175 PF01202 Shikimate kinase DCE93_08180 PF01264 Chorismate synthase DCE93_08185 PF08501 Shikimate dehydrogenase substrate binding domain DCE93_08185 PF01488 Shikimate / quinate 5-dehydrogenase DCE93_08185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DCE93_08195 PF03652 Holliday junction resolvase DCE93_08200 PF02272 DHHA1 domain DCE93_08200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DCE93_08200 PF01411 tRNA synthetases class II (A) DCE93_08210 PF01479 S4 domain DCE93_08210 PF00163 Ribosomal protein S4/S9 N-terminal domain DCE93_08215 PF00004 ATPase family associated with various cellular activities (AAA) DCE93_08215 PF12002 MgsA AAA+ ATPase C terminal DCE93_08215 PF16193 AAA C-terminal domain DCE93_08220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DCE93_08225 PF03993 Domain of Unknown Function (DUF349) DCE93_08235 PF02824 TGS domain DCE93_08235 PF04607 Region found in RelA / SpoT proteins DCE93_08235 PF13291 ACT domain DCE93_08240 PF02355 Protein export membrane protein DCE93_08240 PF07549 SecD/SecF GG Motif DCE93_08245 PF07549 SecD/SecF GG Motif DCE93_08245 PF02355 Protein export membrane protein DCE93_08255 PF05491 RuvB C-terminal winged helix domain DCE93_08255 PF17864 RuvB AAA lid domain DCE93_08255 PF05496 Holliday junction DNA helicase RuvB P-loop domain DCE93_08260 PF07499 RuvA, C-terminal domain DCE93_08260 PF01330 RuvA N terminal domain DCE93_08265 PF02075 Crossover junction endodeoxyribonuclease RuvC DCE93_08270 PF01709 Transcriptional regulator DCE93_08285 PF01174 SNO glutamine amidotransferase family DCE93_08290 PF01680 SOR/SNZ family DCE93_08295 PF00392 Bacterial regulatory proteins, gntR family DCE93_08295 PF00155 Aminotransferase class I and II DCE93_08300 PF08543 Phosphomethylpyrimidine kinase DCE93_08305 PF01230 HIT domain DCE93_08310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DCE93_08310 PF03129 Anticodon binding domain DCE93_08310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DCE93_08355 PF00909 Ammonium Transporter Family DCE93_08360 PF08299 Bacterial dnaA protein helix-turn-helix DCE93_08360 PF11638 DnaA N-terminal domain DCE93_08360 PF00308 Bacterial dnaA protein DCE93_08365 PF00581 Rhodanese-like domain DCE93_08370 PF02657 Fe-S metabolism associated domain DCE93_08385 PF00570 HRDC domain DCE93_08385 PF01612 3'-5' exonuclease DCE93_08390 PF02803 Thiolase, C-terminal domain DCE93_08390 PF00108 Thiolase, N-terminal domain DCE93_08395 PF00378 Enoyl-CoA hydratase/isomerase DCE93_08395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DCE93_08395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DCE93_08400 PF02779 Transketolase, pyrimidine binding domain DCE93_08400 PF02780 Transketolase, C-terminal domain DCE93_08400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DCE93_08405 PF00694 Aconitase C-terminal domain DCE93_08405 PF00330 Aconitase family (aconitate hydratase) DCE93_08420 PF00692 dUTPase DCE93_08445 PF03594 Benzoate membrane transport protein DCE93_08450 PF07724 AAA domain (Cdc48 subfamily) DCE93_08450 PF10431 C-terminal, D2-small domain, of ClpB protein DCE93_08450 PF06689 ClpX C4-type zinc finger DCE93_08455 PF00574 Clp protease DCE93_08460 PF00574 Clp protease DCE93_08470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DCE93_08470 PF05697 Bacterial trigger factor protein (TF) DCE93_08470 PF05698 Bacterial trigger factor protein (TF) C-terminus DCE93_08505 PF00210 Ferritin-like domain DCE93_08515 PF00072 Response regulator receiver domain DCE93_08515 PF00196 Bacterial regulatory proteins, luxR family DCE93_08525 PF07732 Multicopper oxidase DCE93_08525 PF07731 Multicopper oxidase DCE93_08530 PF07969 Amidohydrolase family DCE93_08535 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DCE93_08535 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DCE93_08535 PF06827 Zinc finger found in FPG and IleRS DCE93_08540 PF02502 Ribose/Galactose Isomerase DCE93_08550 PF01433 Peptidase family M1 domain DCE93_08550 PF11838 ERAP1-like C-terminal domain DCE93_08555 PF00005 ABC transporter DCE93_08565 PF07730 Histidine kinase DCE93_08570 PF00196 Bacterial regulatory proteins, luxR family DCE93_08570 PF00072 Response regulator receiver domain DCE93_08575 PF11838 ERAP1-like C-terminal domain DCE93_08575 PF01433 Peptidase family M1 domain DCE93_08580 PF00924 Mechanosensitive ion channel DCE93_08585 PF01152 Bacterial-like globin DCE93_08590 PF00890 FAD binding domain DCE93_08620 PF12848 ABC transporter DCE93_08620 PF00005 ABC transporter DCE93_08630 PF00436 Single-strand binding protein family DCE93_08635 PF00248 Aldo/keto reductase family DCE93_08650 PF02540 NAD synthase DCE93_08655 PF00999 Sodium/hydrogen exchanger family DCE93_08665 PF00929 Exonuclease DCE93_08700 PF00005 ABC transporter DCE93_08705 PF09819 ABC-type cobalt transport system, permease component DCE93_08715 PF11798 IMS family HHH motif DCE93_08715 PF00817 impB/mucB/samB family DCE93_08715 PF11799 impB/mucB/samB family C-terminal domain DCE93_08725 PF02637 GatB domain DCE93_08725 PF02934 GatB/GatE catalytic domain DCE93_08730 PF01425 Amidase DCE93_08735 PF02686 Glu-tRNAGln amidotransferase C subunit DCE93_08740 PF12826 Helix-hairpin-helix motif DCE93_08740 PF03120 NAD-dependent DNA ligase OB-fold domain DCE93_08740 PF01653 NAD-dependent DNA ligase adenylation domain DCE93_08740 PF00533 BRCA1 C Terminus (BRCT) domain DCE93_08740 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DCE93_08750 PF00266 Aminotransferase class-V DCE93_08755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DCE93_08755 PF00128 Alpha amylase, catalytic domain DCE93_08760 PF04073 Aminoacyl-tRNA editing domain DCE93_08765 PF00343 Carbohydrate phosphorylase DCE93_08765 PF11897 Protein of unknown function (DUF3417) DCE93_08770 PF11896 Domain of unknown function (DUF3416) DCE93_08775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DCE93_08775 PF00128 Alpha amylase, catalytic domain DCE93_08775 PF02806 Alpha amylase, C-terminal all-beta domain DCE93_08795 PF01594 AI-2E family transporter DCE93_08825 PF01765 Ribosome recycling factor DCE93_08830 PF00696 Amino acid kinase family DCE93_08835 PF00889 Elongation factor TS DCE93_08840 PF00318 Ribosomal protein S2 DCE93_08850 PF00589 Phage integrase family DCE93_08850 PF02899 Phage integrase, N-terminal SAM-like domain DCE93_08855 PF00149 Calcineurin-like phosphoesterase DCE93_08860 PF17782 DprA winged helix domain DCE93_08860 PF02481 DNA recombination-mediator protein A DCE93_08865 PF01078 Magnesium chelatase, subunit ChlI DCE93_08865 PF13335 Magnesium chelatase, subunit ChlI C-terminal DCE93_08870 PF02021 Uncharacterised protein family UPF0102 DCE93_08875 PF10611 Protein of unknown function (DUF2469) DCE93_08880 PF01351 Ribonuclease HII DCE93_08885 PF10502 Signal peptidase, peptidase S26 DCE93_08890 PF01245 Ribosomal protein L19 DCE93_08900 PF00557 Metallopeptidase family M24 DCE93_08905 PF00355 Rieske [2Fe-2S] domain DCE93_08910 PF18267 Rubredoxin NAD+ reductase C-terminal domain DCE93_08910 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_08910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DCE93_08910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DCE93_08910 PF04324 BFD-like [2Fe-2S] binding domain DCE93_08915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCE93_08915 PF10414 Sirohaem synthase dimerisation region DCE93_08915 PF14824 Sirohaem biosynthesis protein central DCE93_08925 PF07690 Major Facilitator Superfamily DCE93_08930 PF01568 Molydopterin dinucleotide binding domain DCE93_08930 PF00384 Molybdopterin oxidoreductase DCE93_08930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DCE93_08935 PF14759 Reductase C-terminal DCE93_08935 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_08940 PF03454 MoeA C-terminal region (domain IV) DCE93_08940 PF00994 Probable molybdopterin binding domain DCE93_08940 PF03453 MoeA N-terminal region (domain I and II) DCE93_08950 PF12804 MobA-like NTP transferase domain DCE93_08960 PF01746 tRNA (Guanine-1)-methyltransferase DCE93_08965 PF01782 RimM N-terminal domain DCE93_08975 PF00886 Ribosomal protein S16 DCE93_08980 PF04107 Glutamate-cysteine ligase family 2(GCS2) DCE93_08985 PF00232 Glycosyl hydrolase family 1 DCE93_08995 PF00448 SRP54-type protein, GTPase domain DCE93_08995 PF02978 Signal peptide binding domain DCE93_08995 PF02881 SRP54-type protein, helical bundle domain DCE93_09005 PF00448 SRP54-type protein, GTPase domain DCE93_09005 PF02881 SRP54-type protein, helical bundle domain DCE93_09015 PF16657 Maltogenic Amylase, C-terminal domain DCE93_09015 PF00128 Alpha amylase, catalytic domain DCE93_09020 PF02463 RecF/RecN/SMC N terminal domain DCE93_09020 PF06470 SMC proteins Flexible Hinge Domain DCE93_09030 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DCE93_09030 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DCE93_09030 PF06827 Zinc finger found in FPG and IleRS DCE93_09035 PF00035 Double-stranded RNA binding motif DCE93_09035 PF14622 Ribonuclease-III-like DCE93_09040 PF01783 Ribosomal L32p protein family DCE93_09045 PF02620 Large ribosomal RNA subunit accumulation protein YceD DCE93_09060 PF07726 ATPase family associated with various cellular activities (AAA) DCE93_09060 PF17863 AAA lid domain DCE93_09065 PF01467 Cytidylyltransferase-like DCE93_09070 PF00271 Helicase conserved C-terminal domain DCE93_09070 PF17191 RecG wedge domain DCE93_09070 PF00270 DEAD/DEAH box helicase DCE93_09085 PF02769 AIR synthase related protein, C-terminal domain DCE93_09085 PF00586 AIR synthase related protein, N-terminal domain DCE93_09095 PF07478 D-ala D-ala ligase C-terminus DCE93_09095 PF01820 D-ala D-ala ligase N-terminus DCE93_09100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DCE93_09100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DCE93_09105 PF01553 Acyltransferase DCE93_09110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DCE93_09115 PF00694 Aconitase C-terminal domain DCE93_09120 PF00330 Aconitase family (aconitate hydratase) DCE93_09130 PF03741 Integral membrane protein TerC family DCE93_09135 PF03350 Uncharacterized protein family, UPF0114 DCE93_09145 PF00781 Diacylglycerol kinase catalytic domain DCE93_09155 PF00144 Beta-lactamase DCE93_09165 PF17092 Penicillin-binding protein OB-like domain DCE93_09165 PF00912 Transglycosylase DCE93_09165 PF00905 Penicillin binding protein transpeptidase domain DCE93_09200 PF00749 tRNA synthetases class I (E and Q), catalytic domain DCE93_09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCE93_09205 PF03466 LysR substrate binding domain DCE93_09215 PF01557 Fumarylacetoacetate (FAA) hydrolase family DCE93_09220 PF01063 Amino-transferase class IV DCE93_09225 PF00180 Isocitrate/isopropylmalate dehydrogenase DCE93_09230 PF07690 Major Facilitator Superfamily DCE93_09240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DCE93_09240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DCE93_09240 PF01842 ACT domain DCE93_09260 PF03932 CutC family DCE93_09265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DCE93_09265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DCE93_09270 PF10369 Small subunit of acetolactate synthase DCE93_09275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DCE93_09275 PF00205 Thiamine pyrophosphate enzyme, central domain DCE93_09275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DCE93_09280 PF00920 Dehydratase family DCE93_09285 PF00982 Glycosyltransferase family 20 DCE93_09295 PF03176 MMPL family DCE93_09315 PF02632 BioY family DCE93_09320 PF13193 AMP-binding enzyme C-terminal domain DCE93_09320 PF00501 AMP-binding enzyme DCE93_09320 PF16177 Acetyl-coenzyme A synthetase N-terminus DCE93_09325 PF00108 Thiolase, N-terminal domain DCE93_09325 PF02803 Thiolase, C-terminal domain DCE93_09330 PF00005 ABC transporter DCE93_09335 PF02361 Cobalt transport protein DCE93_09345 PF00459 Inositol monophosphatase family DCE93_09360 PF00892 EamA-like transporter family DCE93_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DCE93_09365 PF03466 LysR substrate binding domain DCE93_09380 PF13350 Tyrosine phosphatase family DCE93_09385 PF01668 SmpB protein DCE93_09390 PF02687 FtsX-like permease family DCE93_09390 PF18075 FtsX extracellular domain DCE93_09400 PF00472 RF-1 domain DCE93_09400 PF03462 PCRF domain DCE93_09445 PF00437 Type II/IV secretion system protein DCE93_09460 PF07969 Amidohydrolase family DCE93_09470 PF01126 Heme oxygenase DCE93_09475 PF09335 SNARE associated Golgi protein DCE93_09485 PF06441 Epoxide hydrolase N terminus DCE93_09490 PF01545 Cation efflux family DCE93_09500 PF08281 Sigma-70, region 4 DCE93_09500 PF04542 Sigma-70 region 2 DCE93_09505 PF12282 Signal transduction histidine kinase DCE93_09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_09505 PF07568 Histidine kinase DCE93_09535 PF01043 SecA preprotein cross-linking domain DCE93_09535 PF07517 SecA DEAD-like domain DCE93_09535 PF07516 SecA Wing and Scaffold domain DCE93_09540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DCE93_09540 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DCE93_09550 PF10646 Sporulation and spore germination DCE93_09550 PF10647 Lipoprotein LpqB beta-propeller domain DCE93_09555 PF00512 His Kinase A (phospho-acceptor) domain DCE93_09555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_09555 PF00672 HAMP domain DCE93_09560 PF00072 Response regulator receiver domain DCE93_09560 PF00486 Transcriptional regulatory protein, C terminal DCE93_09575 PF14258 Domain of unknown function (DUF4350) DCE93_09580 PF07726 ATPase family associated with various cellular activities (AAA) DCE93_09580 PF17863 AAA lid domain DCE93_09600 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DCE93_09600 PF05221 S-adenosyl-L-homocysteine hydrolase DCE93_09605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DCE93_09605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DCE93_09605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DCE93_09605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DCE93_09625 PF02467 Transcription factor WhiB DCE93_09630 PF01370 NAD dependent epimerase/dehydratase family DCE93_09635 PF01965 DJ-1/PfpI family DCE93_09640 PF01238 Phosphomannose isomerase type I DCE93_09645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DCE93_09645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DCE93_09645 PF02770 Acyl-CoA dehydrogenase, middle domain DCE93_09660 PF00535 Glycosyl transferase family 2 DCE93_09680 PF00535 Glycosyl transferase family 2 DCE93_09685 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DCE93_09685 PF00132 Bacterial transferase hexapeptide (six repeats) DCE93_09690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCE93_09695 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DCE93_09695 PF01118 Semialdehyde dehydrogenase, NAD binding domain DCE93_09715 PF00535 Glycosyl transferase family 2 DCE93_09730 PF00535 Glycosyl transferase family 2 DCE93_09735 PF02350 UDP-N-acetylglucosamine 2-epimerase DCE93_09750 PF01370 NAD dependent epimerase/dehydratase family DCE93_09755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCE93_09760 PF16363 GDP-mannose 4,6 dehydratase DCE93_09770 PF01061 ABC-2 type transporter DCE93_09775 PF00005 ABC transporter DCE93_09785 PF00483 Nucleotidyl transferase DCE93_09790 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DCE93_09795 PF00535 Glycosyl transferase family 2 DCE93_09800 PF16363 GDP-mannose 4,6 dehydratase DCE93_09805 PF04321 RmlD substrate binding domain DCE93_09810 PF00535 Glycosyl transferase family 2 DCE93_09810 PF00534 Glycosyl transferases group 1 DCE93_09830 PF00731 AIR carboxylase DCE93_09835 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DCE93_09835 PF02222 ATP-grasp domain DCE93_09855 PF03309 Type III pantothenate kinase DCE93_09855 PF03099 Biotin/lipoate A/B protein ligase family DCE93_09855 PF02237 Biotin protein ligase C terminal domain DCE93_09860 PF01039 Carboxyl transferase domain DCE93_09885 PF01938 TRAM domain DCE93_09885 PF05958 tRNA (Uracil-5-)-methyltransferase DCE93_09890 PF02545 Maf-like protein DCE93_09895 PF00289 Biotin carboxylase, N-terminal domain DCE93_09895 PF00364 Biotin-requiring enzyme DCE93_09895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DCE93_09895 PF02785 Biotin carboxylase C-terminal domain DCE93_09905 PF13520 Amino acid permease DCE93_09910 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_09910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DCE93_09915 PF01048 Phosphorylase superfamily DCE93_09920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DCE93_09920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DCE93_09920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DCE93_09920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DCE93_09930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DCE93_09935 PF00962 Adenosine/AMP deaminase DCE93_09940 PF02885 Glycosyl transferase family, helical bundle domain DCE93_09940 PF00591 Glycosyl transferase family, a/b domain DCE93_09940 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DCE93_09945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DCE93_09965 PF02608 ABC transporter substrate-binding protein PnrA-like DCE93_09975 PF00483 Nucleotidyl transferase DCE93_09975 PF01050 Mannose-6-phosphate isomerase DCE93_09980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DCE93_09990 PF02910 Fumarate reductase flavoprotein C-term DCE93_09990 PF00890 FAD binding domain DCE93_09995 PF13085 2Fe-2S iron-sulfur cluster binding domain DCE93_10010 PF00579 tRNA synthetases class I (W and Y) DCE93_10020 PF13419 Haloacid dehalogenase-like hydrolase DCE93_10025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DCE93_10025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DCE93_10030 PF00230 Major intrinsic protein DCE93_10035 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DCE93_10035 PF01266 FAD dependent oxidoreductase DCE93_10040 PF04198 Putative sugar-binding domain DCE93_10045 PF01872 RibD C-terminal domain DCE93_10045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DCE93_10050 PF00677 Lumazine binding domain DCE93_10055 PF00925 GTP cyclohydrolase II DCE93_10055 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DCE93_10060 PF00885 6,7-dimethyl-8-ribityllumazine synthase DCE93_10070 PF00083 Sugar (and other) transporter DCE93_10070 PF07690 Major Facilitator Superfamily DCE93_10085 PF00037 4Fe-4S binding domain DCE93_10090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_10095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DCE93_10095 PF10414 Sirohaem synthase dimerisation region DCE93_10095 PF14824 Sirohaem biosynthesis protein central DCE93_10100 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_10105 PF00005 ABC transporter DCE93_10115 PF00009 Elongation factor Tu GTP binding domain DCE93_10120 PF01507 Phosphoadenosine phosphosulfate reductase family DCE93_10125 PF01507 Phosphoadenosine phosphosulfate reductase family DCE93_10130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DCE93_10130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DCE93_10140 PF00664 ABC transporter transmembrane region DCE93_10140 PF00005 ABC transporter DCE93_10155 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DCE93_10155 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DCE93_10175 PF00106 short chain dehydrogenase DCE93_10180 PF00108 Thiolase, N-terminal domain DCE93_10180 PF02803 Thiolase, C-terminal domain DCE93_10185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DCE93_10185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DCE93_10200 PF07690 Major Facilitator Superfamily DCE93_10200 PF00083 Sugar (and other) transporter DCE93_10205 PF01557 Fumarylacetoacetate (FAA) hydrolase family DCE93_10210 PF03328 HpcH/HpaI aldolase/citrate lyase family DCE93_10215 PF03737 Aldolase/RraA DCE93_10225 PF00171 Aldehyde dehydrogenase family DCE93_10230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DCE93_10245 PF00857 Isochorismatase family DCE93_10250 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DCE93_10255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DCE93_10255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DCE93_10265 PF00561 alpha/beta hydrolase fold DCE93_10270 PF09115 DNA polymerase III, delta subunit, C terminal DCE93_10275 PF02223 Thymidylate kinase DCE93_10280 PF13368 Topoisomerase C-terminal repeat DCE93_10280 PF01751 Toprim domain DCE93_10280 PF01131 DNA topoisomerase DCE93_10310 PF00437 Type II/IV secretion system protein DCE93_10315 PF13193 AMP-binding enzyme C-terminal domain DCE93_10315 PF00501 AMP-binding enzyme DCE93_10315 PF16177 Acetyl-coenzyme A synthetase N-terminus DCE93_10330 PF00905 Penicillin binding protein transpeptidase domain DCE93_10330 PF00912 Transglycosylase DCE93_10335 PF00149 Calcineurin-like phosphoesterase DCE93_10345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DCE93_10345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DCE93_10345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DCE93_10375 PF00582 Universal stress protein family DCE93_10380 PF00265 Thymidine kinase DCE93_10395 PF04055 Radical SAM superfamily DCE93_10400 PF00005 ABC transporter DCE93_10405 PF06039 Malate:quinone oxidoreductase (Mqo) DCE93_10420 PF02056 Family 4 glycosyl hydrolase DCE93_10420 PF11975 Family 4 glycosyl hydrolase C-terminal domain DCE93_10430 PF00005 ABC transporter DCE93_10430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DCE93_10435 PF00005 ABC transporter DCE93_10435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DCE93_10440 PF12911 N-terminal TM domain of oligopeptide transport permease C DCE93_10440 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_10445 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_10450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DCE93_10455 PF01081 KDPG and KHG aldolase DCE93_10460 PF00294 pfkB family carbohydrate kinase DCE93_10470 PF07969 Amidohydrolase family DCE93_10485 PF00553 Cellulose binding domain DCE93_10485 PF01341 Glycosyl hydrolases family 6 DCE93_10490 PF00072 Response regulator receiver domain DCE93_10490 PF00486 Transcriptional regulatory protein, C terminal DCE93_10510 PF13426 PAS domain DCE93_10510 PF00512 His Kinase A (phospho-acceptor) domain DCE93_10510 PF00672 HAMP domain DCE93_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_10515 PF01118 Semialdehyde dehydrogenase, NAD binding domain DCE93_10515 PF02774 Semialdehyde dehydrogenase, dimerisation domain DCE93_10520 PF13840 ACT domain DCE93_10520 PF01842 ACT domain DCE93_10520 PF00696 Amino acid kinase family DCE93_10535 PF02132 RecR protein DCE93_10535 PF13662 Toprim domain DCE93_10540 PF12169 DNA polymerase III subunits gamma and tau domain III DCE93_10545 PF01258 Prokaryotic dksA/traR C4-type zinc finger DCE93_10555 PF00871 Acetokinase family DCE93_10560 PF01515 Phosphate acetyl/butaryl transferase DCE93_10560 PF07085 DRTGG domain DCE93_10580 PF00583 Acetyltransferase (GNAT) family DCE93_10585 PF05872 Bacterial protein of unknown function (DUF853) DCE93_10590 PF13298 DNA polymerase Ligase (LigD) DCE93_10590 PF01068 ATP dependent DNA ligase domain DCE93_10590 PF04679 ATP dependent DNA ligase C terminal region DCE93_10595 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DCE93_10600 PF13378 Enolase C-terminal domain-like DCE93_10600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DCE93_10615 PF01014 Uricase DCE93_10620 PF00576 HIUase/Transthyretin family DCE93_10625 PF01979 Amidohydrolase family DCE93_10630 PF05899 Protein of unknown function (DUF861) DCE93_10630 PF07883 Cupin domain DCE93_10645 PF01799 [2Fe-2S] binding domain DCE93_10645 PF00111 2Fe-2S iron-sulfur cluster binding domain DCE93_10650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DCE93_10650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DCE93_10660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DCE93_10675 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_10680 PF00005 ABC transporter DCE93_10680 PF03459 TOBE domain DCE93_10685 PF04055 Radical SAM superfamily DCE93_10685 PF06463 Molybdenum Cofactor Synthesis C DCE93_10690 PF02391 MoaE protein DCE93_10695 PF00581 Rhodanese-like domain DCE93_10695 PF00899 ThiF family DCE93_10705 PF00994 Probable molybdopterin binding domain DCE93_10705 PF03454 MoeA C-terminal region (domain IV) DCE93_10705 PF03453 MoeA N-terminal region (domain I and II) DCE93_10710 PF01967 MoaC family DCE93_10725 PF07690 Major Facilitator Superfamily DCE93_10730 PF00118 TCP-1/cpn60 chaperonin family DCE93_10735 PF11258 Protein of unknown function (DUF3048) N-terminal domain DCE93_10735 PF17479 Protein of unknown function (DUF3048) C-terminal domain DCE93_10740 PF00313 'Cold-shock' DNA-binding domain DCE93_10755 PF01641 SelR domain DCE93_10780 PF00005 ABC transporter DCE93_10780 PF17912 MalK OB fold domain DCE93_10790 PF00588 SpoU rRNA Methylase family DCE93_10790 PF08032 RNA 2'-O ribose methyltransferase substrate binding DCE93_10795 PF01406 tRNA synthetases class I (C) catalytic domain DCE93_10795 PF09190 DALR domain DCE93_10800 PF02542 YgbB family DCE93_10800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DCE93_10805 PF02559 CarD-like/TRCF domain DCE93_10815 PF00486 Transcriptional regulatory protein, C terminal DCE93_10815 PF00072 Response regulator receiver domain DCE93_10820 PF00512 His Kinase A (phospho-acceptor) domain DCE93_10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_10825 PF01895 PhoU domain DCE93_10830 PF00300 Histidine phosphatase superfamily (branch 1) DCE93_10840 PF08768 Domain of unknown function (DUF1794) DCE93_10850 PF00486 Transcriptional regulatory protein, C terminal DCE93_10855 PF17941 Polyphosphate kinase C-terminal domain 1 DCE93_10855 PF13090 Polyphosphate kinase C-terminal domain 2 DCE93_10855 PF02503 Polyphosphate kinase middle domain DCE93_10855 PF13089 Polyphosphate kinase N-terminal domain DCE93_10860 PF00293 NUDIX domain DCE93_10860 PF00300 Histidine phosphatase superfamily (branch 1) DCE93_10865 PF12849 PBP superfamily domain DCE93_10870 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_10875 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_10880 PF00005 ABC transporter DCE93_10905 PF00296 Luciferase-like monooxygenase DCE93_10910 PF10099 Anti-sigma-K factor rskA DCE93_10915 PF04545 Sigma-70, region 4 DCE93_10915 PF04542 Sigma-70 region 2 DCE93_10920 PF00578 AhpC/TSA family DCE93_10920 PF02683 Cytochrome C biogenesis protein transmembrane region DCE93_10920 PF17991 Thioredoxin like C-terminal domain DCE93_10925 PF02469 Fasciclin domain DCE93_10930 PF02674 Colicin V production protein DCE93_10935 PF01263 Aldose 1-epimerase DCE93_10940 PF08220 DeoR-like helix-turn-helix domain DCE93_10940 PF00455 DeoR C terminal sensor domain DCE93_10945 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DCE93_10945 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DCE93_10950 PF10509 Galactokinase galactose-binding signature DCE93_10950 PF08544 GHMP kinases C terminal DCE93_10950 PF00288 GHMP kinases N terminal domain DCE93_10960 PF13520 Amino acid permease DCE93_10965 PF00132 Bacterial transferase hexapeptide (six repeats) DCE93_10975 PF08666 SAF domain DCE93_10975 PF03102 NeuB family DCE93_10980 PF02348 Cytidylyltransferase DCE93_10985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DCE93_10985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DCE93_10990 PF00464 Serine hydroxymethyltransferase DCE93_10995 PF00728 Glycosyl hydrolase family 20, catalytic domain DCE93_10995 PF02838 Glycosyl hydrolase family 20, domain 2 DCE93_11005 PF01380 SIS domain DCE93_11015 PF08220 DeoR-like helix-turn-helix domain DCE93_11015 PF00455 DeoR C terminal sensor domain DCE93_11020 PF01979 Amidohydrolase family DCE93_11030 PF00551 Formyl transferase DCE93_11040 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DCE93_11045 PF00480 ROK family DCE93_11050 PF00933 Glycosyl hydrolase family 3 N terminal domain DCE93_11050 PF01915 Glycosyl hydrolase family 3 C-terminal domain DCE93_11055 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_11060 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_11070 PF00480 ROK family DCE93_11075 PF00403 Heavy-metal-associated domain DCE93_11080 PF00180 Isocitrate/isopropylmalate dehydrogenase DCE93_11095 PF07730 Histidine kinase DCE93_11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DCE93_11095 PF05384 Sensor protein DegS DCE93_11100 PF00072 Response regulator receiver domain DCE93_11100 PF00196 Bacterial regulatory proteins, luxR family DCE93_11105 PF00005 ABC transporter DCE93_11105 PF00664 ABC transporter transmembrane region DCE93_11110 PF00664 ABC transporter transmembrane region DCE93_11110 PF00005 ABC transporter DCE93_11120 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DCE93_11120 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DCE93_11125 PF02142 MGS-like domain DCE93_11125 PF01808 AICARFT/IMPCHase bienzyme DCE93_11130 PF00551 Formyl transferase DCE93_11135 PF13520 Amino acid permease DCE93_11155 PF02629 CoA binding domain DCE93_11155 PF00549 CoA-ligase DCE93_11160 PF00549 CoA-ligase DCE93_11160 PF08442 ATP-grasp domain DCE93_11165 PF00293 NUDIX domain DCE93_11175 PF13361 UvrD-like helicase C-terminal domain DCE93_11175 PF00580 UvrD/REP helicase N-terminal domain DCE93_11180 PF03009 Glycerophosphoryl diester phosphodiesterase family DCE93_11190 PF00056 lactate/malate dehydrogenase, NAD binding domain DCE93_11190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DCE93_11195 PF00958 GMP synthase C terminal domain DCE93_11195 PF02540 NAD synthase DCE93_11195 PF00117 Glutamine amidotransferase class-I DCE93_11200 PF12823 Domain of unknown function (DUF3817) DCE93_11210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DCE93_11210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DCE93_11210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DCE93_11225 PF00534 Glycosyl transferases group 1 DCE93_11225 PF13477 Glycosyl transferase 4-like DCE93_11230 PF01370 NAD dependent epimerase/dehydratase family DCE93_11240 PF02397 Bacterial sugar transferase DCE93_11245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCE93_11250 PF02719 Polysaccharide biosynthesis protein DCE93_11260 PF01451 Low molecular weight phosphotyrosine protein phosphatase DCE93_11265 PF13614 AAA domain DCE93_11270 PF01266 FAD dependent oxidoreductase DCE93_11270 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DCE93_11275 PF00478 IMP dehydrogenase / GMP reductase domain DCE93_11285 PF00155 Aminotransferase class I and II DCE93_11290 PF00571 CBS domain DCE93_11290 PF00478 IMP dehydrogenase / GMP reductase domain DCE93_11295 PF02653 Branched-chain amino acid transport system / permease component DCE93_11300 PF02653 Branched-chain amino acid transport system / permease component DCE93_11300 PF11862 Domain of unknown function (DUF3382) DCE93_11305 PF12399 Branched-chain amino acid ATP-binding cassette transporter DCE93_11305 PF00005 ABC transporter DCE93_11310 PF00005 ABC transporter DCE93_11320 PF00892 EamA-like transporter family DCE93_11325 PF00166 Chaperonin 10 Kd subunit DCE93_11350 PF00814 Glycoprotease family DCE93_11355 PF00583 Acetyltransferase (GNAT) family DCE93_11365 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DCE93_11370 PF01168 Alanine racemase, N-terminal domain DCE93_11370 PF00842 Alanine racemase, C-terminal domain DCE93_11375 PF01648 4'-phosphopantetheinyl transferase superfamily DCE93_11380 PF01380 SIS domain DCE93_11385 PF00485 Phosphoribulokinase / Uridine kinase family DCE93_11390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DCE93_11390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DCE93_11390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DCE93_11390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DCE93_11395 PF00380 Ribosomal protein S9/S16 DCE93_11400 PF00572 Ribosomal protein L13 DCE93_11405 PF01416 tRNA pseudouridine synthase DCE93_11410 PF01196 Ribosomal protein L17 DCE93_11415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DCE93_11415 PF01000 RNA polymerase Rpb3/RpoA insert domain DCE93_11415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DCE93_11420 PF00411 Ribosomal protein S11 DCE93_11425 PF00416 Ribosomal protein S13/S18 DCE93_11430 PF00444 Ribosomal protein L36 DCE93_11435 PF01176 Translation initiation factor 1A / IF-1 DCE93_11440 PF02896 PEP-utilising enzyme, TIM barrel domain DCE93_11440 PF05524 PEP-utilising enzyme, N-terminal DCE93_11440 PF00391 PEP-utilising enzyme, mobile domain DCE93_11445 PF00557 Metallopeptidase family M24 DCE93_11455 PF00344 SecY translocase DCE93_11460 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DCE93_11465 PF00327 Ribosomal protein L30p/L7e DCE93_11470 PF00333 Ribosomal protein S5, N-terminal domain DCE93_11470 PF03719 Ribosomal protein S5, C-terminal domain DCE93_11475 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DCE93_11480 PF00347 Ribosomal protein L6 DCE93_11485 PF00410 Ribosomal protein S8 DCE93_11490 PF00281 Ribosomal protein L5 DCE93_11490 PF00673 ribosomal L5P family C-terminus DCE93_11495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DCE93_11500 PF00238 Ribosomal protein L14p/L23e DCE93_11505 PF00366 Ribosomal protein S17 DCE93_11510 PF00831 Ribosomal L29 protein DCE93_11515 PF00252 Ribosomal protein L16p/L10e DCE93_11520 PF07650 KH domain DCE93_11520 PF00189 Ribosomal protein S3, C-terminal domain DCE93_11525 PF00237 Ribosomal protein L22p/L17e DCE93_11530 PF00203 Ribosomal protein S19 DCE93_11535 PF00181 Ribosomal Proteins L2, RNA binding domain DCE93_11535 PF03947 Ribosomal Proteins L2, C-terminal domain DCE93_11540 PF00276 Ribosomal protein L23 DCE93_11545 PF00573 Ribosomal protein L4/L1 family DCE93_11550 PF00297 Ribosomal protein L3 DCE93_11555 PF00338 Ribosomal protein S10p/S20e DCE93_11560 PF02566 OsmC-like protein DCE93_11565 PF01757 Acyltransferase family DCE93_11570 PF00009 Elongation factor Tu GTP binding domain DCE93_11570 PF03144 Elongation factor Tu domain 2 DCE93_11570 PF03143 Elongation factor Tu C-terminal domain DCE93_11575 PF03144 Elongation factor Tu domain 2 DCE93_11575 PF00679 Elongation factor G C-terminus DCE93_11575 PF14492 Elongation Factor G, domain II DCE93_11575 PF03764 Elongation factor G, domain IV DCE93_11575 PF00009 Elongation factor Tu GTP binding domain DCE93_11580 PF00177 Ribosomal protein S7p/S5e DCE93_11585 PF00164 Ribosomal protein S12/S23 DCE93_11605 PF04983 RNA polymerase Rpb1, domain 3 DCE93_11605 PF00623 RNA polymerase Rpb1, domain 2 DCE93_11605 PF04997 RNA polymerase Rpb1, domain 1 DCE93_11605 PF05000 RNA polymerase Rpb1, domain 4 DCE93_11605 PF04998 RNA polymerase Rpb1, domain 5 DCE93_11610 PF04565 RNA polymerase Rpb2, domain 3 DCE93_11610 PF10385 RNA polymerase beta subunit external 1 domain DCE93_11610 PF00562 RNA polymerase Rpb2, domain 6 DCE93_11610 PF04560 RNA polymerase Rpb2, domain 7 DCE93_11610 PF04561 RNA polymerase Rpb2, domain 2 DCE93_11610 PF04563 RNA polymerase beta subunit DCE93_11635 PF03746 LamB/YcsF family DCE93_11640 PF07995 Glucose / Sorbosone dehydrogenase DCE93_11660 PF04536 TPM domain DCE93_11675 PF00270 DEAD/DEAH box helicase DCE93_11675 PF00271 Helicase conserved C-terminal domain DCE93_11705 PF00117 Glutamine amidotransferase class-I DCE93_11705 PF00958 GMP synthase C terminal domain DCE93_11705 PF02540 NAD synthase DCE93_11710 PF04226 Transglycosylase associated protein DCE93_11715 PF02096 60Kd inner membrane protein DCE93_11730 PF11799 impB/mucB/samB family C-terminal domain DCE93_11730 PF00817 impB/mucB/samB family DCE93_11755 PF06745 KaiC DCE93_11755 PF18073 Rubredoxin metal binding domain DCE93_11775 PF00583 Acetyltransferase (GNAT) family DCE93_11780 PF17871 AAA lid domain DCE93_11780 PF00004 ATPase family associated with various cellular activities (AAA) DCE93_11780 PF10431 C-terminal, D2-small domain, of ClpB protein DCE93_11780 PF02861 Clp amino terminal domain, pathogenicity island component DCE93_11780 PF07724 AAA domain (Cdc48 subfamily) DCE93_11790 PF13443 Cro/C1-type HTH DNA-binding domain DCE93_11800 PF05726 Pirin C-terminal cupin domain DCE93_11800 PF02678 Pirin DCE93_11805 PF13091 PLD-like domain DCE93_11805 PF13396 Phospholipase_D-nuclease N-terminal DCE93_11810 PF01336 OB-fold nucleic acid binding domain DCE93_11810 PF00152 tRNA synthetases class II (D, K and N) DCE93_11815 PF02569 Pantoate-beta-alanine ligase DCE93_11840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DCE93_11845 PF02152 Dihydroneopterin aldolase DCE93_11850 PF00809 Pterin binding enzyme DCE93_11855 PF01227 GTP cyclohydrolase I DCE93_11860 PF01434 Peptidase family M41 DCE93_11860 PF17862 AAA+ lid domain DCE93_11860 PF00004 ATPase family associated with various cellular activities (AAA) DCE93_11870 PF01171 PP-loop family DCE93_11870 PF09179 TilS substrate binding domain DCE93_11875 PF00719 Inorganic pyrophosphatase DCE93_11880 PF00877 NlpC/P60 family DCE93_11905 PF00589 Phage integrase family DCE93_11905 PF14659 Phage integrase, N-terminal SAM-like domain DCE93_11920 PF06470 SMC proteins Flexible Hinge Domain DCE93_11920 PF02463 RecF/RecN/SMC N terminal domain DCE93_11930 PF13651 Adenine-specific methyltransferase EcoRI DCE93_12000 PF12697 Alpha/beta hydrolase family DCE93_12010 PF12697 Alpha/beta hydrolase family DCE93_12025 PF02811 PHP domain DCE93_12025 PF14716 Helix-hairpin-helix domain DCE93_12025 PF14791 DNA polymerase beta thumb DCE93_12035 PF00107 Zinc-binding dehydrogenase DCE93_12035 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_12045 PF00892 EamA-like transporter family DCE93_12050 PF02397 Bacterial sugar transferase DCE93_12055 PF01266 FAD dependent oxidoreductase DCE93_12065 PF00132 Bacterial transferase hexapeptide (six repeats) DCE93_12090 PF00535 Glycosyl transferase family 2 DCE93_12110 PF00550 Phosphopantetheine attachment site DCE93_12115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DCE93_12115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DCE93_12120 PF13193 AMP-binding enzyme C-terminal domain DCE93_12120 PF00501 AMP-binding enzyme DCE93_12140 PF00535 Glycosyl transferase family 2 DCE93_12145 PF13439 Glycosyltransferase Family 4 DCE93_12145 PF00534 Glycosyl transferases group 1 DCE93_12150 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCE93_12160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DCE93_12165 PF01370 NAD dependent epimerase/dehydratase family DCE93_12170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DCE93_12170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DCE93_12195 PF04228 Putative neutral zinc metallopeptidase DCE93_12200 PF00561 alpha/beta hydrolase fold DCE93_12210 PF00056 lactate/malate dehydrogenase, NAD binding domain DCE93_12210 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DCE93_12220 PF02909 Tetracyclin repressor-like, C-terminal domain DCE93_12220 PF00440 Bacterial regulatory proteins, tetR family DCE93_12240 PF09382 RQC domain DCE93_12240 PF00270 DEAD/DEAH box helicase DCE93_12240 PF00271 Helicase conserved C-terminal domain DCE93_12240 PF16124 RecQ zinc-binding DCE93_12240 PF00570 HRDC domain DCE93_12245 PF00565 Staphylococcal nuclease homologue DCE93_12245 PF00149 Calcineurin-like phosphoesterase DCE93_12245 PF02872 5'-nucleotidase, C-terminal domain DCE93_12245 PF00746 LPXTG cell wall anchor motif DCE93_12255 PF08148 DSHCT (NUC185) domain DCE93_12255 PF00271 Helicase conserved C-terminal domain DCE93_12255 PF00270 DEAD/DEAH box helicase DCE93_12270 PF09364 XFP N-terminal domain DCE93_12270 PF09363 XFP C-terminal domain DCE93_12270 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DCE93_12285 PF00248 Aldo/keto reductase family DCE93_12315 PF00011 Hsp20/alpha crystallin family DCE93_12325 PF00313 'Cold-shock' DNA-binding domain DCE93_12335 PF01370 NAD dependent epimerase/dehydratase family DCE93_12340 PF00313 'Cold-shock' DNA-binding domain DCE93_12355 PF08281 Sigma-70, region 4 DCE93_12355 PF04542 Sigma-70 region 2 DCE93_12360 PF03795 YCII-related domain DCE93_12365 PF04107 Glutamate-cysteine ligase family 2(GCS2) DCE93_12380 PF00005 ABC transporter DCE93_12380 PF00664 ABC transporter transmembrane region DCE93_12385 PF00005 ABC transporter DCE93_12385 PF00664 ABC transporter transmembrane region DCE93_12395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DCE93_12395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DCE93_12405 PF00246 Zinc carboxypeptidase DCE93_12425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DCE93_12425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DCE93_12440 PF01872 RibD C-terminal domain DCE93_12450 PF00027 Cyclic nucleotide-binding domain DCE93_12450 PF04960 Glutaminase DCE93_12465 PF00072 Response regulator receiver domain DCE93_12465 PF00196 Bacterial regulatory proteins, luxR family DCE93_12490 PF01370 NAD dependent epimerase/dehydratase family DCE93_12490 PF00391 PEP-utilising enzyme, mobile domain DCE93_12505 PF02646 RmuC family DCE93_12515 PF08463 EcoEI R protein C-terminal DCE93_12515 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DCE93_12515 PF00271 Helicase conserved C-terminal domain DCE93_12515 PF04851 Type III restriction enzyme, res subunit DCE93_12530 PF12161 HsdM N-terminal domain DCE93_12530 PF02384 N-6 DNA Methylase DCE93_12545 PF00293 NUDIX domain DCE93_12580 PF04607 Region found in RelA / SpoT proteins DCE93_12580 PF13291 ACT domain DCE93_12580 PF02824 TGS domain DCE93_12595 PF01139 tRNA-splicing ligase RtcB DCE93_12605 PF00072 Response regulator receiver domain DCE93_12605 PF00196 Bacterial regulatory proteins, luxR family DCE93_12615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DCE93_12615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DCE93_12620 PF12833 Helix-turn-helix domain DCE93_12620 PF01965 DJ-1/PfpI family DCE93_12630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DCE93_12630 PF01367 5'-3' exonuclease, C-terminal SAM fold DCE93_12635 PF02028 BCCT, betaine/carnitine/choline family transporter DCE93_12640 PF06081 Aromatic acid exporter family member 1 DCE93_12665 PF00106 short chain dehydrogenase DCE93_12670 PF17760 UvrA interaction domain DCE93_12670 PF17755 UvrA DNA-binding domain DCE93_12670 PF00005 ABC transporter DCE93_12685 PF01425 Amidase DCE93_12690 PF04371 Porphyromonas-type peptidyl-arginine deiminase DCE93_12710 PF00296 Luciferase-like monooxygenase DCE93_12725 PF00296 Luciferase-like monooxygenase DCE93_12740 PF16347 Domain of unknown function (DUF4976) DCE93_12740 PF00884 Sulfatase DCE93_12750 PF00005 ABC transporter DCE93_12755 PF02361 Cobalt transport protein DCE93_12770 PF00581 Rhodanese-like domain DCE93_12785 PF13244 Domain of unknown function (DUF4040) DCE93_12785 PF00361 Proton-conducting membrane transporter DCE93_12785 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DCE93_12785 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DCE93_12790 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DCE93_12815 PF00378 Enoyl-CoA hydratase/isomerase DCE93_12820 PF00111 2Fe-2S iron-sulfur cluster binding domain DCE93_12820 PF00175 Oxidoreductase NAD-binding domain DCE93_12820 PF00970 Oxidoreductase FAD-binding domain DCE93_12825 PF01883 Iron-sulfur cluster assembly protein DCE93_12830 PF05138 Phenylacetic acid catabolic protein DCE93_12835 PF06243 Phenylacetic acid degradation B DCE93_12840 PF05138 Phenylacetic acid catabolic protein DCE93_12845 PF03061 Thioesterase superfamily DCE93_12855 PF00440 Bacterial regulatory proteins, tetR family DCE93_12855 PF17932 Tetracyclin repressor-like, C-terminal domain DCE93_12865 PF09382 RQC domain DCE93_12865 PF16124 RecQ zinc-binding DCE93_12865 PF00570 HRDC domain DCE93_12865 PF00271 Helicase conserved C-terminal domain DCE93_12865 PF00270 DEAD/DEAH box helicase DCE93_12875 PF00171 Aldehyde dehydrogenase family DCE93_12875 PF01575 MaoC like domain DCE93_12880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DCE93_12880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DCE93_12885 PF00378 Enoyl-CoA hydratase/isomerase DCE93_12890 PF00108 Thiolase, N-terminal domain DCE93_12890 PF02803 Thiolase, C-terminal domain DCE93_12900 PF00271 Helicase conserved C-terminal domain DCE93_12900 PF00270 DEAD/DEAH box helicase DCE93_12905 PF00583 Acetyltransferase (GNAT) family DCE93_12915 PF03631 Virulence factor BrkB DCE93_12920 PF07730 Histidine kinase DCE93_12925 PF00196 Bacterial regulatory proteins, luxR family DCE93_12925 PF00072 Response regulator receiver domain DCE93_12955 PF00221 Aromatic amino acid lyase DCE93_12960 PF00005 ABC transporter DCE93_12995 PF12849 PBP superfamily domain DCE93_13000 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13005 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13010 PF00069 Protein kinase domain DCE93_13010 PF03793 PASTA domain DCE93_13025 PF01551 Peptidase family M23 DCE93_13025 PF10145 Phage-related minor tail protein DCE93_13025 PF01464 Transglycosylase SLT domain DCE93_13030 PF00221 Aromatic amino acid lyase DCE93_13040 PF00005 ABC transporter DCE93_13040 PF00571 CBS domain DCE93_13045 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13050 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13060 PF01175 Urocanase Rossmann-like domain DCE93_13060 PF17391 Urocanase N-terminal domain DCE93_13060 PF17392 Urocanase C-terminal domain DCE93_13065 PF01979 Amidohydrolase family DCE93_13075 PF00175 Oxidoreductase NAD-binding domain DCE93_13075 PF00111 2Fe-2S iron-sulfur cluster binding domain DCE93_13080 PF00174 Oxidoreductase molybdopterin binding domain DCE93_13095 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13100 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13105 PF00480 ROK family DCE93_13110 PF00300 Histidine phosphatase superfamily (branch 1) DCE93_13115 PF00491 Arginase family DCE93_13130 PF00723 Glycosyl hydrolases family 15 DCE93_13145 PF04542 Sigma-70 region 2 DCE93_13145 PF08281 Sigma-70, region 4 DCE93_13150 PF00873 AcrB/AcrD/AcrF family DCE93_13155 PF00155 Aminotransferase class I and II DCE93_13165 PF00376 MerR family regulatory protein DCE93_13165 PF09278 MerR, DNA binding DCE93_13185 PF04234 CopC domain DCE93_13195 PF13520 Amino acid permease DCE93_13220 PF02769 AIR synthase related protein, C-terminal domain DCE93_13220 PF00586 AIR synthase related protein, N-terminal domain DCE93_13230 PF03061 Thioesterase superfamily DCE93_13235 PF00156 Phosphoribosyl transferase domain DCE93_13250 PF01252 Signal peptidase (SPase) II DCE93_13255 PF02843 Phosphoribosylglycinamide synthetase, C domain DCE93_13255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DCE93_13255 PF02844 Phosphoribosylglycinamide synthetase, N domain DCE93_13260 PF01259 SAICAR synthetase DCE93_13265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DCE93_13275 PF03301 Tryptophan 2,3-dioxygenase DCE93_13285 PF00266 Aminotransferase class-V DCE93_13295 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DCE93_13305 PF00199 Catalase DCE93_13305 PF06628 Catalase-related immune-responsive DCE93_13310 PF01475 Ferric uptake regulator family DCE93_13325 PF00156 Phosphoribosyl transferase domain DCE93_13335 PF08501 Shikimate dehydrogenase substrate binding domain DCE93_13340 PF07690 Major Facilitator Superfamily DCE93_13345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DCE93_13345 PF00586 AIR synthase related protein, N-terminal domain DCE93_13345 PF02769 AIR synthase related protein, C-terminal domain DCE93_13350 PF00293 NUDIX domain DCE93_13350 PF13344 Haloacid dehalogenase-like hydrolase DCE93_13380 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_13380 PF00107 Zinc-binding dehydrogenase DCE93_13395 PF00106 short chain dehydrogenase DCE93_13400 PF01817 Chorismate mutase type II DCE93_13400 PF02153 Prephenate dehydrogenase DCE93_13410 PF00005 ABC transporter DCE93_13415 PF00392 Bacterial regulatory proteins, gntR family DCE93_13420 PF00892 EamA-like transporter family DCE93_13425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DCE93_13425 PF07992 Pyridine nucleotide-disulphide oxidoreductase DCE93_13430 PF00474 Sodium:solute symporter family DCE93_13440 PF07694 5TMR of 5TMR-LYT DCE93_13440 PF06580 Histidine kinase DCE93_13445 PF04397 LytTr DNA-binding domain DCE93_13445 PF00072 Response regulator receiver domain DCE93_13455 PF00474 Sodium:solute symporter family DCE93_13475 PF00709 Adenylosuccinate synthetase DCE93_13485 PF00764 Arginosuccinate synthase DCE93_13495 PF01544 CorA-like Mg2+ transporter protein DCE93_13505 PF01566 Natural resistance-associated macrophage protein DCE93_13505 PF03358 NADPH-dependent FMN reductase DCE93_13515 PF13344 Haloacid dehalogenase-like hydrolase DCE93_13520 PF01156 Inosine-uridine preferring nucleoside hydrolase DCE93_13525 PF00294 pfkB family carbohydrate kinase DCE93_13535 PF00156 Phosphoribosyl transferase domain DCE93_13545 PF03605 Anaerobic c4-dicarboxylate membrane transporter DCE93_13550 PF03575 Peptidase family S51 DCE93_13560 PF00378 Enoyl-CoA hydratase/isomerase DCE93_13565 PF00994 Probable molybdopterin binding domain DCE93_13565 PF02464 Competence-damaged protein DCE93_13565 PF18146 Damage-inducible protein CinA KH domain DCE93_13570 PF00171 Aldehyde dehydrogenase family DCE93_13575 PF00202 Aminotransferase class-III DCE93_13580 PF09084 NMT1/THI5 like DCE93_13585 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13590 PF00005 ABC transporter DCE93_13595 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_13605 PF01979 Amidohydrolase family DCE93_13610 PF00795 Carbon-nitrogen hydrolase DCE93_13615 PF00392 Bacterial regulatory proteins, gntR family DCE93_13615 PF00155 Aminotransferase class I and II DCE93_13620 PF03144 Elongation factor Tu domain 2 DCE93_13620 PF03764 Elongation factor G, domain IV DCE93_13620 PF14492 Elongation Factor G, domain II DCE93_13620 PF00679 Elongation factor G C-terminus DCE93_13620 PF00009 Elongation factor Tu GTP binding domain DCE93_13625 PF00455 DeoR C terminal sensor domain DCE93_13625 PF08220 DeoR-like helix-turn-helix domain DCE93_13645 PF01032 FecCD transport family DCE93_13650 PF00005 ABC transporter DCE93_13660 PF00005 ABC transporter DCE93_13670 PF00296 Luciferase-like monooxygenase DCE93_13680 PF00296 Luciferase-like monooxygenase DCE93_13685 PF00881 Nitroreductase family DCE93_13685 PF01996 F420-0:Gamma-glutamyl ligase DCE93_13700 PF00211 Adenylate and Guanylate cyclase catalytic domain DCE93_13700 PF00069 Protein kinase domain DCE93_13710 PF00561 alpha/beta hydrolase fold DCE93_13715 PF00106 short chain dehydrogenase DCE93_13720 PF00440 Bacterial regulatory proteins, tetR family DCE93_13720 PF17938 Tetracyclin repressor-like, C-terminal domain DCE93_13725 PF07690 Major Facilitator Superfamily DCE93_13755 PF00196 Bacterial regulatory proteins, luxR family DCE93_13755 PF00072 Response regulator receiver domain DCE93_13760 PF02261 Aspartate decarboxylase DCE93_13765 PF01022 Bacterial regulatory protein, arsR family DCE93_13780 PF13732 Domain of unknown function (DUF4162) DCE93_13780 PF00005 ABC transporter DCE93_13790 PF01212 Beta-eliminating lyase DCE93_13795 PF00881 Nitroreductase family DCE93_13800 PF00107 Zinc-binding dehydrogenase DCE93_13800 PF08240 Alcohol dehydrogenase GroES-like domain DCE93_13820 PF00135 Carboxylesterase family DCE93_13830 PF00004 ATPase family associated with various cellular activities (AAA) DCE93_13830 PF10431 C-terminal, D2-small domain, of ClpB protein DCE93_13830 PF02861 Clp amino terminal domain, pathogenicity island component DCE93_13830 PF17871 AAA lid domain DCE93_13830 PF07724 AAA domain (Cdc48 subfamily) DCE93_13835 PF04264 YceI-like domain DCE93_13840 PF00296 Luciferase-like monooxygenase DCE93_13845 PF04075 F420H(2)-dependent quinone reductase DCE93_13850 PF01494 FAD binding domain DCE93_13860 PF02797 Chalcone and stilbene synthases, C-terminal domain DCE93_13860 PF00195 Chalcone and stilbene synthases, N-terminal domain DCE93_13875 PF01594 AI-2E family transporter DCE93_13885 PF00916 Sulfate permease family DCE93_13885 PF01740 STAS domain DCE93_13890 PF00654 Voltage gated chloride channel DCE93_13910 PF02617 ATP-dependent Clp protease adaptor protein ClpS DCE93_13915 PF05175 Methyltransferase small domain DCE93_13925 PF13411 MerR HTH family regulatory protein DCE93_13930 PF00684 DnaJ central domain DCE93_13930 PF00226 DnaJ domain DCE93_13930 PF01556 DnaJ C terminal domain DCE93_13935 PF01025 GrpE DCE93_13940 PF00012 Hsp70 protein DCE93_13945 PF00440 Bacterial regulatory proteins, tetR family DCE93_13960 PF07690 Major Facilitator Superfamily DCE93_13975 PF00692 dUTPase DCE93_13985 PF08281 Sigma-70, region 4 DCE93_13985 PF04542 Sigma-70 region 2 DCE93_14010 PF07690 Major Facilitator Superfamily DCE93_14020 PF00144 Beta-lactamase DCE93_14025 PF05970 PIF1-like helicase DCE93_14035 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DCE93_14035 PF05425 Copper resistance protein D DCE93_14040 PF00216 Bacterial DNA-binding protein DCE93_14045 PF00253 Ribosomal protein S14p/S29e DCE93_14050 PF00471 Ribosomal protein L33 DCE93_14055 PF00830 Ribosomal L28 family DCE93_14060 PF00356 Bacterial regulatory proteins, lacI family DCE93_14070 PF00356 Bacterial regulatory proteins, lacI family DCE93_14100 PF00282 Pyridoxal-dependent decarboxylase conserved domain DCE93_14110 PF00528 Binding-protein-dependent transport system inner membrane component DCE93_14115 PF00005 ABC transporter DCE93_14115 PF00571 CBS domain DCE93_14130 PF00950 ABC 3 transport family DCE93_14135 PF00005 ABC transporter DCE93_14140 PF01297 Zinc-uptake complex component A periplasmic DCE93_14150 PF00364 Biotin-requiring enzyme DCE93_14150 PF02817 e3 binding domain DCE93_14150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DCE93_14155 PF02780 Transketolase, C-terminal domain DCE93_14155 PF02779 Transketolase, pyrimidine binding domain DCE93_14160 PF00676 Dehydrogenase E1 component DCE93_14165 PF00155 Aminotransferase class I and II DCE93_14170 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DCE93_14185 PF01451 Low molecular weight phosphotyrosine protein phosphatase DCE93_14190 PF00206 Lyase DCE93_14190 PF08328 Adenylosuccinate lyase C-terminal DCE93_14205 PF02233 NAD(P) transhydrogenase beta subunit DCE93_14210 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DCE93_14210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DCE93_14210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DCE93_14215 PF09339 IclR helix-turn-helix domain DCE93_14215 PF01614 Bacterial transcriptional regulator DCE93_14220 PF07976 Phenol hydroxylase, C-terminal dimerisation domain DCE93_14220 PF01494 FAD binding domain DCE93_14230 PF13732 Domain of unknown function (DUF4162) DCE93_14230 PF00005 ABC transporter DCE93_14255 PF03551 Transcriptional regulator PadR-like family DCE93_14265 PF03796 DnaB-like helicase C terminal domain DCE93_14265 PF00772 DnaB-like helicase N terminal domain DCE93_14270 PF03948 Ribosomal protein L9, C-terminal domain DCE93_14270 PF01281 Ribosomal protein L9, N-terminal domain DCE93_14275 PF01084 Ribosomal protein S18 DCE93_14280 PF00436 Single-strand binding protein family DCE93_14285 PF01250 Ribosomal protein S6 DCE93_14290 PF12627 Probable RNA and SrmB- binding site of polymerase A DCE93_14290 PF01743 Poly A polymerase head domain DCE93_14290 PF01966 HD domain DCE93_14300 PF03023 Lipid II flippase MurJ DCE93_14310 PF00085 Thioredoxin DCE93_14315 PF00155 Aminotransferase class I and II DCE93_14320 PF07478 D-ala D-ala ligase C-terminus DCE93_14320 PF01820 D-ala D-ala ligase N-terminus DCE93_14325 PF17762 HTH domain found in ParB protein DCE93_14325 PF02195 ParB-like nuclease domain DCE93_14330 PF13614 AAA domain DCE93_14335 PF02527 rRNA small subunit methyltransferase G DCE93_14345 PF02096 60Kd inner membrane protein DCE93_14350 PF01809 Putative membrane protein insertion efficiency factor DCE93_14355 PF00825 Ribonuclease P DCE93_14360 PF00468 Ribosomal protein L34