 C1O47_00015 NONE
 C1O47_00020 NONE
 C1O47_00025 NONE
 C1O47_00030 NONE
 C1O47_00035    9097 ..    9113 +  -3.5  -3.98816   ATGCAAGAAGAATCC              GCGGCGG AGA CCTCCCC              TTTAATCTTGATTTG  59 311
 C1O47_00040 NONE
 C1O47_00045   12047 ..   12064 +  -4.9  -2.78405   ATTTTCCCCACTCAT             TTTTCCT ATGG AGGAAGA              CCTTTTTTCCCTGGC  45 43
 C1O47_00050   14494 ..   14504 +  -2.4  -3.18768   GCACGCATCATGCGC                 CCGG CTG CCCG                 TATCTTCGTATTCCC  44 81
        pgsA   15724 ..   15736 +  -4.1  -4.32491   AGGAATGAGCCTTCT                TCGGA ATT TCTGA                TTGTTATTTTTCCAT  63 525
 C1O47_00065   18482 ..   18495 +  -4.5  -3.20722   GGAAGGAACGGCAGC               CGTGC GGAA GCATG                ATTTTAATCATTCAA  50 11
 C1O47_00075   19497 ..   19531 + -12.9  -5.21709   ATGATGCCCTTACAG    GCCCC-GTCCTTCCCGC GCT GCG-GCAGGACTGGGGC    TTTTTTCATGTCCGG 100 306
 C1O47_00085   21255 ..   21265 +  -6.8   -5.5112   AACAGGCCCAGCTTG                 CAGG CGG CCTG                 TTTTTTATTGCTCCA 100 123
 C1O47_00090 NONE
 C1O47_00095   23574 ..   23594 +  -5.3  -3.03661   TCCTGACGTTTCCCT            CTCTCCCCG TTA CCGGGACAG            CTTTCTCCTTCCGTG  51 35
 C1O47_00110   27568 ..   27590 +  -3.4  -4.08767   TGACAAAGTTTTTCA           TGGAAATCCC GCG GCGATTTGCA           TTTTAGAACAATGGC  56 458
 C1O47_00120 NONE
 C1O47_00125 NONE
 C1O47_00130   33011 ..   33039 + -16.1   -5.0538   CACAACCTTCACGAA        GGCAGGACATTCC CAA GGAATTTCCTGCC        TTTTTTCCGATGGGA 100 72
 C1O47_00135   33414 ..   33448 +  -4.3  -4.19238   AGCCAGCTTCTTGCG    CGTTGGC-GT-CCGCAG GTG TTCCGGAACTGCCAGCG    TTTTCCCATTGCGCA  61 202
 C1O47_00170   40022 ..   40034 + -10.5  -3.65812   TCCGAGTTTCCTTCG                CGGGC CCT GCCCG                TTCTATTCAACAAAC  80 47
 C1O47_00175   41599 ..   41646 + -14.4  -5.04385   GACACCCCCTTTCAA CGGGATTGTTCCAAGACAGGC AAAACGG GCCT-TTTCGGAACAATCCCG TTTTTTACGCCTCTC 100 46
 C1O47_00180   42179 ..   42196 +    -2   -3.9712   TTCGTACCATCGGCA             TCAAGA TCACTC TCTTGG              TTTCTCCTGGACTGC  55 268
 C1O47_00185   42912 ..   42946 +  -2.9  -4.59853   TTTGTGGACCTATTT     TCGGGGGATAGATTA ACTGA TAATATATCAACCGA     TTTTTGGAGAATTAC  66 325
 C1O47_00225 NONE
 C1O47_00230   58086 ..   58102 +  -6.6  -4.86621   GGCATGATTTCAAGA              TACAGG TAGTC CCTGTA              TTTTTCCTTAACCAT  84 370
 C1O47_00245   60289 ..   60305 +  -4.3  -3.54146   TCAAATAATTCTTGC              CTTTCGG CTT CCGGTAG              TATTTACTTCGCCGC  54 60
 C1O47_00250   60429 ..   60450 +  -4.5  -4.28049   GCCAGCTTTACCGCC           GCGGCAGTTA CGA TAATT-CCGC           TTTTCCCCTTTTCAG  66 37
 C1O47_00255   61741 ..   61757 +  -2.3  -2.84051   ATGTCCTAACTTCCT              TTTTCCT TTC ATGAAAA              CTTTACTGGAAGTCC  39 32
        prmC NONE
        priA NONE
 C1O47_00270   65807 ..   65820 +  -6.7  -2.80493   GAAAAGGCGGACTCC               TTCCC ATCA GGGAA                ATTATCTGTTCAGCA  53 54
 C1O47_00280   67195 ..   67227 +  -3.5  -3.09516   GAGGACGGGTAATGT     CTGCCG-CACCA CAACACTAAA TGGTGTCGGTAG      TTCAATGGTAGAGCC  46 174
 C1O47_00285   67313 ..   67329 + -10.9  -5.21709   TTTCCTTCATAAAAA              GAGCACT TAT AGTGCTC              TTTTTTACTATCCCC 100 46
 C1O47_00290 NONE
 C1O47_00295 NONE
 C1O47_00300   69734 ..   69760 + -11.7  -5.10033   GCCTACCAAAATAAA         GCCTTACAAGT TAACC ACTTGTGAGGC         TTTTCTTTCTCTTCC 100 33
 C1O47_00305 NONE
 C1O47_00310 NONE
 C1O47_00315   78163 ..   78173 +  -6.8  -3.15861   AGCATTGTTCAAGAG                 CCAG GAA CTGG                 TTAATAAAGGTAGTC  54 357
 C1O47_00355 NONE
 C1O47_00360 NONE
 C1O47_00365   87535 ..   87565 +  -8.2  -2.74999   GGCACGCTTTCCTGC       GCCCTGCTGCCG GGCATTG CGGTGGCAGTGC       TCCTCTTCGGCCTTA  59 169
 C1O47_00375 NONE
 C1O47_00380 NONE
 C1O47_00385   92550 ..   92577 + -21.4  -5.27335   AGGCTTTTCAACCAG        GGCCCCTGCATG ACAA CATGCAGGGGCC         TTTTTCTTTAACGGA 100 49
 C1O47_00390   95616 ..   95640 +  -6.3  -4.07568   ACCATGGCGGCGGGA          GCAGGGGCGCG TTC CGTATTCCTGC          TTTTCAGCCAGACGA  66 442
 C1O47_00405   98556 ..   98576 +  -8.9  -4.30014   TCCGCCCATCAGCCT            GCCAGCCTC TGC GGGGCTTGC            TTTTCCATTGCTCCC  83 78
 C1O47_00410   99573 ..   99604 + -10.1  -4.81249   TATTCCCCTTATCCG      GGCCGCTGGCG GCATTCCCCG CGCTGGCGGCC       TTTTTCAATTTACGG 100 59
 C1O47_00415 NONE
        ispD NONE
 C1O47_00425  101776 ..  101791 +  -2.5  -3.71645   GAAAAAAATCCAGCC              GACGG CCCCTC CTGTC               TTTGACTCTCCCCTT  50 144
        trpS NONE
 C1O47_00435 NONE
 C1O47_00440 NONE
 C1O47_00445 NONE
 C1O47_00450 NONE
 C1O47_00455 NONE
 C1O47_00460  106028 ..  106053 +  -9.1  -4.54727   GCACCAATTGATAAA         CCTCTTAATCC GAAA GAATTAAGAGG          TTTTCCTTTACCCGG  86 35
 C1O47_00465  108012 ..  108024 +  -2.7  -3.68366   GACAAATGCACCTTC                TATGA TTT TCATG                TTACTTTTAGGATAA  52 377
 C1O47_00500  116869 ..  116885 +    -3   -5.4492   TGATATCGCACTGCA              TATTCG CCATA CGGATA              TTTTTTATATCTATC  84 321
 C1O47_00510  117498 ..  117508 +    -4  -3.14931   CGTACTGCCGGGGCA                 TGAT CGA ATCA                 TTCATCCGCCATGCA  46 48
 C1O47_00515 NONE
 C1O47_00520 NONE
 C1O47_00525  123131 ..  123147 +    -8  -2.89185   CTGCATCATTGCCAT              TTCGGG CTTTC CCCGAA              TGATTATCCTGTGTT  60 6
 C1O47_00530 NONE
 C1O47_00535  128364 ..  128384 +  -3.2  -2.99649   TCAAGGAAAGACTCC           CGACGCTAC AGTC GGAGCG-CG            TATCTATGAGGATAT  42 214
 C1O47_00590 NONE
 C1O47_00595  140453 ..  140479 +  -4.4  -3.84674   CCGGGAGATTTACCT         GTGTCTTCCT GAAGAAG GGGAGGGCAC         TTATTCTCGTGAACT  57 437
 C1O47_00610  143483 ..  143499 +    -3  -3.05384   CGAATGCTGGAATTT             TCC-CTG AAAG CAGAGGA              TTAAATCGCCAAGAA  44 5
         kbl NONE
 C1O47_00625  148197 ..  148221 +  -5.5  -3.86524   GCCATTCCAACAGCT          CCCTGACGCCG TAT CTGCGGCAGCG          TTTCTCCCCCGCTCT  61 20
 C1O47_00630 NONE
 C1O47_00635 NONE
 C1O47_00640  153058 ..  153084 + -16.7  -3.30457   CCCCTCCACAAAAAA         GCCCCGTTCAT ATTTC ATGAACGGGGC         TATATTAATTTTTCA 100 296
 C1O47_00660 NONE
 C1O47_00665  156638 ..  156652 +   -10   -2.7458   GAATCTTTTTTATGC               CATCCC CGC GGGATG               ATTCTGGATTTTTTC  65 67
        thiS  156900 ..  156915 +  -3.2  -3.86524   TCTCCATCGTCGCCG              GCGG CTAGGGTT CCGC               TTTCTGGAACAGTCT  54 18
 C1O47_00675  159011 ..  159026 +    -9  -3.21099   AAGGGGCAGAAACTC              TCCCTG GCAA CAGGGA               TCATTTTATCCTGTC  67 185
 C1O47_00680  161397 ..  161416 +  -3.6  -4.57569   AGCGGCAGCCTCTCC            GGAACAGA ATCG TTTGTTTC             TTTTTCCCCCAATCG  66 289
 C1O47_00685  161868 ..  161879 +  -4.4  -3.18264   GAGGGATTACCTTTT                GCAA CGGT TTGC                 TTCATAAATAGAAGC  48 7
 C1O47_00690  162197 ..  162219 + -15.6  -5.69262   TTTTCGCCTGATTCA           GGCTCCGGAT CCG GTCCGGAGCC           TTTTTATTTTTCTCC 100 52
 C1O47_00730 NONE
 C1O47_00735  169350 ..  169362 +  -4.9  -3.14211   TAAAGGCATGGCCCA                TTCAT GCC ATGAA                TTGCTGAAAAAAGAT  48 6
 C1O47_00740 NONE
 C1O47_00745  170609 ..  170621 +  -3.4  -3.91032   TGAATCCAGAAAGCT                CGTT CTTTC AACG                TTTCTCCCCTCCTTG  54 345
 C1O47_00750 NONE
 C1O47_00755 NONE
 C1O47_00760 NONE
 C1O47_00765  175993 ..  176012 +  -3.6  -3.85698   GACAGGGCAGCAAGG            GAATGACT GAAG AATCATTC             TTTGTACCCCCCACG  57 108
 C1O47_00790  182762 ..  182786 + -15.1  -4.79826   TAACTTAGACAAAAA          CGCTGACTAGG TAT TCTAGTCAGCG          TTTTTCATAATATAT 100 124
 C1O47_00800  183621 ..  183644 +  -3.9   -4.1552   AACTAGAGTCTTAAC          TTTTGGGAA TTGGTT TTCCCCAAA           TTTCTTAGAAGACTA  61 27
 C1O47_00805  184421 ..  184436 +    -4  -4.62471   TATTTGCCATTTACA              GTGTCA TAAA TGATAC               TTTTGTGTCTCCATT  69 438
 C1O47_00820  186479 ..  186503 +  -2.7  -3.79481   TCGCCTTCTTTCCAG          GGACAATACGC GCA GCCGCTTGTCC          TTTACCTTGAATTTC  53 139
 C1O47_00870 NONE
 C1O47_00875 NONE
 C1O47_00880 NONE
 C1O47_00885  199697 ..  199718 +  -4.3  -4.19953   ATGCCTGGTTTCCAT           GCCCCTTTC CGCG GAACCGGGC            TTTTAGGCTTGCCTG  63 103
 C1O47_00890  201467 ..  201493 +  -2.2  -3.41961   CAGACAGCCCCGCGC         CCCCGTCC GCGGACCGGAA GGACGGTG         TTCATTAATCGTCAT  46 469
 C1O47_00905 NONE
 C1O47_00910 NONE
 C1O47_00915  203742 ..  203765 + -13.9  -4.13767   CCCGCACATAAAAAA          CCGGAGGGA TTATTT TCCCTCCGG           TTTTCGGATACGGCC 100 123
 C1O47_00925  206880 ..  206912 + -14.9  -4.86731   CCTTCCTTTTCCGGA      AAACCGGCTTCCCCT GAC AAGGGAAGCCGGTTA      TTTTCTTTACGGAGA 100 52
 C1O47_00930  209089 ..  209100 +  -5.8  -3.68351   GATCCGCCGCTGGAA                CAGG GCTC CCTG                 TTTGACTCCTGAAAC  62 2
 C1O47_00935  209293 ..  209327 + -15.1  -4.37886   ACAAGCGGCTCCATC     ATAACCCGCTCAAGG TCAAT CCTTGAGCGGGTTGC     TTTTATGAGGCGTGC 100 28
 C1O47_00940 NONE
 C1O47_00945  210299 ..  210330 + -11.6  -3.90291   CCGGATGCCATGAAA      GAGCCTCCGTGC AAACATCC GCACGGAAGCTC       TTTCATTAACAGGAT  84 118
 C1O47_00960 NONE
 C1O47_00965 NONE
 C1O47_00970 NONE
 C1O47_00975 NONE
 C1O47_00980 NONE
 C1O47_00985  217815 ..  217825 +  -8.2   -3.6215   TCAAATAGCTTCTGA                 GGCG CTC CGCC                 TTTCCGCTCCCTTCC  67 264
 C1O47_00995  219556 ..  219569 +  -4.5  -3.90048   GTTCATCATCGGAAT               GCC-GG TAG CCAGGC               TCTTTTTGGAGCCGC  59 196
 C1O47_01045  228974 ..  229001 + -15.7   -4.4267   GTAGGCCCCCTCAAA        GCCGGACATTG AATTTC CAATGTCCGGC         TTTTCCGTTTTCAGC 100 56
 C1O47_01050  230305 ..  230320 +  -6.8   -2.6914   TTTTTCTATCGTGCT              GGC-GCC CCC GGCCGCC              CTTATATAAAAACTC  50 198
 C1O47_01105 NONE
 C1O47_01110  245196 ..  245206 +  -6.8  -3.16683   TCCTCAACTCTTTCT                 TCCC CAT GGGA                 TTCATGAGATAGCCT  56 3
 C1O47_01115 NONE
 C1O47_01120  247164 ..  247179 +  -3.3  -4.56597   TGTGAGAGGCGAAAA              CATGT AAGTCG ACATG               TTTTTCAACAGGAAC  64 114
 C1O47_01125  247562 ..  247591 +  -7.1   -2.7728   CCTCTCCCTTCATCC       CG-CGCCATGCGTG CCA TGCGCATGGCGTCC       TCCTTCCCCTTTCAA  53 42
 C1O47_01130  248057 ..  248067 +  -4.6  -2.56596   AGAAAAGCTCGCACT                 CCTG ATG CGGG                 TGGCTTCCTCCCGGC  44 21
 C1O47_01135  248713 ..  248743 +  -4.1  -4.48333   ACGGAAATCGGTACC       CAGACATTTTTTG CTGGT CAAAAAAGCTCTG       TTTTCGTTAGTATGT  66 333
 C1O47_01145 NONE
 C1O47_01150 NONE
 C1O47_01155  252170 ..  252193 +  -5.2  -3.33037   GAACATTCCCGCAGG          CCCTCCGG-CT TCC AGACCGGGGCG          TTCCTCCTTTCCCGT  53 108
 C1O47_01160 NONE
 C1O47_01165  254115 ..  254127 +  -3.3  -3.54459   CTGGACTAATTCAAA                GGGAG TTG CTACC                TTTCGGGGCGGTTCC  49 83
        kdsB NONE
        pyrG  256536 ..  256569 + -22.7  -3.81488   TTTCATTAAGCCCGG     GGCCTTTTCCGGAAT TTCC ATTCCGGAAAAGGCC      TTCTCTTTCCAGGCA 100 44
 C1O47_01180  258498 ..  258514 +  -7.9  -3.02511   CATGTTGACCTGCCG              GGCCGGA GTT TCCGGGC              TGTTCACCGGATCCA  56 377
 C1O47_01190  265573 ..  265603 + -16.9  -4.52589   TTTCCATTCCGTTTC       ACGCCGCTTTCCC TTTCC GGGAAAGCGGCGC       TTTTGTGTCCGGGAG 100 54
 C1O47_01195  266743 ..  266774 +   -11  -5.22006   TATATCCGGATTATT      CAGAAAAACGGGCA TTGC TGCCCGTTTTTTTA       TTTTTCTTCTCCTGA 100 82
 C1O47_01210 NONE
 C1O47_01215  273705 ..  273733 +  -3.8  -3.67597   CAGGCAGGATATGGC       GCACCA-GCGG CACCGTAA CCGCATGGGGC        TTGTTGGATAAAACG  52 512
 C1O47_01240 NONE
 C1O47_01245 NONE
 C1O47_01250 NONE
 C1O47_01255  284601 ..  284613 +  -2.7  -4.14874   AATTATATAGAATAG                TCTTG CTG TAAGA                TTTTCAGAATATTCT  59 348
 C1O47_01260  285800 ..  285816 +  -2.4   -3.9712   ATTAATAGCAATGAA              TAAAAA ATCAC TTTTTA              TTTATAATCAACTCA  55 45
 C1O47_01265 NONE
 C1O47_01270  287581 ..  287601 +  -4.7  -3.35526   TCTGATTAAATATTT            TTGAGGATG TTG TATCCCCAA            TTCCATTTCTAGTTG  52 32
 C1O47_01275 NONE
 C1O47_01280 NONE
 C1O47_01285  289822 ..  289832 +    -4  -3.87869   AACTGCAATCCATAT                 TGTT CAA AACA                 TTTATGAAAAATTAA  57 8
 C1O47_01290  291442 ..  291453 +    -3  -3.93875   TCGTCATTTTAATTC                GTAA TTGT TTAC                 TCTTGTTTTTTCATC  54 124
 C1O47_01295  292269 ..  292281 +  -6.3  -3.67296   CACCCGGTCACAAGC                GGATT CAG AATCC                TTTGAATCCCTGATA  58 344
 C1O47_01305  293799 ..  293811 +  -9.1  -3.14132   CTTCGGCAGGAACAA                CGGAG TTT CTCCG                TTGCTGAAAGAAACA  65 75
 C1O47_01310 NONE
 C1O47_01315 NONE
 C1O47_01320 NONE
 C1O47_01325  298839 ..  298860 +  -4.4  -3.23708   GCCGCACCGCAGGGT           TGACCGGA ACCGGG TCCGGTGA            TACTTTTTCCGGGCA  50 61
 C1O47_01330 NONE
 C1O47_01335 NONE
 C1O47_01340 NONE
 C1O47_01345 NONE
 C1O47_01350 NONE
 C1O47_01355  306571 ..  306587 +  -2.1  -2.77891   CTATCATCCTGAAAA              GGCCCTG ATG CAGGGGA              CTGTTTCTCCTTGTC  39 18
 C1O47_01360  306997 ..  307009 +  -3.4  -3.60627   CGCTTATAGAGTTGC                TTCC GTAGG GGAA                TTTAAGGTAGAGTGG  49 127
 C1O47_01365 NONE
 C1O47_01370  309265 ..  309300 +  -4.6  -3.39895   GAATACGCGTTCCAC    GCCTTCACCGTAGGAA ATTT TGCGGACGGTGAAAGC     TTCATTGATGCCGGA  52 285
         mce NONE
 C1O47_01390 NONE
 C1O47_01395 NONE
 C1O47_01400  314242 ..  314282 +  -2.3  -2.50816   ACAGGCTCTGGCCAA  AATTGGTTAATCCCGGCGG CAA CCGCCCGGAATCTCCAACA  GTTCCTGGCTCCGAC  38 16
 C1O47_01405 NONE
 C1O47_01410  316820 ..  316837 +  -4.8  -5.00234   AGAATGAGCCTGCCG             CTCCGT TTTTAC ACGGGG              TTTCTTTCTTTTTTC  76 34
 C1O47_01415  318422 ..  318448 + -15.9  -4.90477   CACGTTAACCCCTCA         GGACCGCTTCC GCAAA GGGAGCGGTCC         TTTTCCTTTTTTCTA 100 78
 C1O47_01420  319174 ..  319186 +  -3.3  -2.52896   TGATCCCTCCATGCC                GGGCA ACC TTCCC                TGACTTCCCCCCTGC  40 10
 C1O47_01425  319828 ..  319846 +    -3   -4.7497   CCGTCACCGCAATAT             CCGATTTG GGC CGGAGCGG             TTTTTCCTCAATGGA  70 357
 C1O47_01445  323438 ..  323451 +  -5.2   -3.6422   ATTCCCGCGCCACGG               CGGG AGCGGG CCCG                TGTTTTCAAACAATG  56 139
 C1O47_01450  325385 ..  325403 +  -3.1  -3.89346   GGAACATGTTCACCA             TCTGGTC CACCT GACTGGA             TTTGTCCAATAAAAA  56 280
 C1O47_01465  330882 ..  330909 + -17.8  -5.00884   TTGGAAAAATATATT        G-AGGGAGGCGGG TAT CCCGCCTCCCTGC        TTTTTTCCCGCCCGT 100 80
 C1O47_01475 NONE
 C1O47_01480 NONE
 C1O47_01485  339242 ..  339253 +  -7.2  -3.02043   GCGGAGCCACCAGGG                CGGC GCTG GCCG                 TATTGGAACAGAATT  56 314
 C1O47_01505  342907 ..  342932 +  -5.4  -3.85698   CCCAGCAGCCCCATG         GCAGCCGGATG TTCCT CATCCGCC-GC         TTTGTGCCACAGCCC  59 491
 C1O47_01515  344669 ..  344698 +  -4.2  -2.94232   ATGCGGGGAAATCCG       GTAAACGGGCTG CAACAC CAGTCCGTACAC        ATTCTTTGCCCCGGG  46 327
 C1O47_01545  349262 ..  349287 + -13.3  -5.03314   CCGGGACATAAACAA         GGGCCA-CTCCG TTC CGGGGATGGCCC         TTTTTTGGAGGTAAA 100 53
         def  352784 ..  352794 +  -6.8  -2.71712   CCTTCAGGCAGGACG                 GAGC GCC GCTC                 ATTTCCAGGCACACG  50 440
 C1O47_01575  355468 ..  355502 + -19.4  -4.57073   CTTGTCCCTCTTACG     CAACGGCCGCCTTTCT TCG GGAAAGGCGGCCGTTC     TTTTTGAAACCGGTG 100 49
 C1O47_01645  367869 ..  367880 +  -5.8  -3.06183   ATCCATGTAGATGCC                GGGA GAGC TCCC                 TTCAATAGGCATCGC  52 136
 C1O47_01655  368493 ..  368508 + -11.8   -4.9445   TCGACCAATTTCCAA              GCCGCC TCCG GGCGGC               TTTTTGATTACTTAT 100 34
 C1O47_01670  371800 ..  371830 +  -7.5  -4.37658   CAACGTTTTTCCTTT       TCTTCCGAGGCCG GCTGA CTGCCTGGGAGGA       TTTTATCCAAAGCTT  76 57
 C1O47_01750  386338 ..  386351 +  -3.8  -2.52464   AAGCTGAAAAGAGGA               TCCG ATATTC CGGA                TCGATTCCAGAGAAA  42 34
 C1O47_01755  387168 ..  387182 +  -7.8  -4.04071   GGTTCTCCGCCAGCC               TGGCCT TCC GGGCCA               TTCTTCTTAATCTTT  71 136
 C1O47_01760  388380 ..  388409 +  -9.3  -5.07652   CACTGAACACAGAAA       CGCCCCG-GACG AGCAAAA CGTTGCGGGGCG       TTTTCTTTTGGGCGA 100 57
 C1O47_01820  399474 ..  399499 + -13.3  -4.65263   AATCTTTTTTCTACT         CCGCCGCAG TTTCCCCT CTGCGGCGG          TTTATTTTACACCGT 100 57
 C1O47_01960  419824 ..  419836 +  -7.7  -2.64933   AAGGTGTTGACATAT                CAGCA AAA TGCTG                TAATATCAATGCATG  55 425
 C1O47_01970 NONE
 C1O47_01975  422420 ..  422445 + -18.3  -5.40279   TATATTACTTGCTTC         GCCCCTTGGCC TCCG GGCCAGGGGGC          TTTTATTTTCTTTTG 100 59
 C1O47_01980  423149 ..  423161 +  -2.7  -2.91274   CTGAAACTACTAAAG                GGTAT AAG ATATC                TGTAATTCAAATGAA  42 229
 C1O47_01985  424201 ..  424219 +  -3.2  -3.82261   ATTTTTATCCTATTA             TATAGG GCTTATA CCTATA             TTAGTTTTATTAACG  54 377
 C1O47_02035  432463 ..  432480 +  -6.3  -5.72622   ATAATGCCGACCCGT             TTTTCCG TGAG CGGGAAA              TTTTTTCTTTCTGAC 100 37
 C1O47_02050  434168 ..  434183 +  -3.9  -3.29144   CCATGCGGGAGCATT              GGCGG GAACGG CCGTC               TTGTAGGGGAGCTCC  48 502
 C1O47_02090  439286 ..  439298 +  -4.8  -3.57561   CATGCAGGGCCACCA                GCTG GCGCG CAGC                TTTCACCACTTGGCC  54 110
 C1O47_02100  440642 ..  440669 + -17.1  -5.29846   AGACAGATTACTCCG        GGCGCCTCCAT CAAGCA ATGGAGGCGCC         TTTTTGTTTGCAATT 100 55
 C1O47_02105 NONE
 C1O47_02110 NONE
 C1O47_02115  442189 ..  442203 +  -2.1  -5.06414   GCCATTTCCTGCCCG               GAGTT TTTTC AGCTC               TTTTTATTGGCCGCA  74 63
 C1O47_02145 NONE
 C1O47_02150  446669 ..  446679 +    -4  -3.04248   GATTTCCAGTCGTAA                 TATC ACA GATA                 TGTTCACCAATATTA  46 112
 C1O47_02155  449664 ..  449694 + -14.7  -4.74801   AAAAACTCCGTTCCA      GCCGCCGGG-CTCC ATCA GGAAACCCGGCGGC       TTTTTCATCACATTA 100 50
 C1O47_02160  452473 ..  452489 +  -3.7  -2.74192   CTTTCCTAACCATCT              ATCATTC CGG GAATGAA              TAATATTCAAAAGTA  44 32
 C1O47_02165  453602 ..  453615 +  -5.2  -3.97602   CGGCTCGGAAAAATC               CGGC AAGAAG GCCG                TTTCTCCGTCTCTTC  63 300
 C1O47_02250  463943 ..  463971 + -17.6  -3.76402   CATGACATAGAAAAA        TCCGTTTCCGGA ACGCA TCCGGAAACGGA        TTTCATCAATGAACT 100 242
 C1O47_02265 NONE
 C1O47_02270 NONE
 C1O47_02275 NONE
        xseB NONE
         dxs NONE
 C1O47_02290 NONE
 C1O47_02295  474000 ..  474013 +  -4.5  -3.01712   CCTATCCCGCTTTCA               TCCTC AGCA GGGGA                TGTTCCCCGCCCCGC  47 49
 C1O47_02300  475237 ..  475253 +    -3  -3.28001   CCCCTGCGGAAGCCC             TTCC-CG CTGG CGTGGAA              TTAGCTTTCACAGTA  46 43
         der NONE
 C1O47_02310  477858 ..  477882 +  -2.8  -3.13403   AACATCCTCCTCCAC          CTTCCCCC AATGGATAA GGGGAAAG          TATTGGTCCCGGAAC  43 207
 C1O47_02355 NONE
 C1O47_02360 NONE
 C1O47_02365  489881 ..  489892 +  -3.6  -3.35384   GTACGTATAAACCCC                GTCG TACA CGGC                 TCTTGTATCCATTCT  48 280
 C1O47_02380 NONE
 C1O47_02430 NONE
 C1O47_02435  504540 ..  504551 +  -7.2  -3.28712   CAGCCCATATTGCCA                GCCG TTTG CGGC                 TTCTGGAAAGAGCCG  59 524
 C1O47_02455  506621 ..  506635 +  -2.8   -4.4767   ATATCACAGTTTATC               GGAAAA TTA TTATCC               TTTTATGATGCGTCC  64 40
 C1O47_02460 NONE
 C1O47_02465 NONE
 C1O47_02470  508282 ..  508306 +  -3.6  -3.63837   AGTCTGAACCATGGT         CATGCTGCCGT CATA ACG-CACCATG          TTGTTCAGCACTTCT  52 468
 C1O47_02500  515612 ..  515637 + -11.8   -5.4505   CCCTCTTCCATCAAA         CCGCCTCCCG TTCATC CGGCAGGCGG          TTTTTTATTGGAGCG 100 48
 C1O47_02505 NONE
 C1O47_02510  518463 ..  518480 +  -5.5  -2.62184   AGCCAGCGTTCCGCA             CGGTCCA GCCA TGGACGG              TCATCTGGGGCGGGC  46 253
 C1O47_02535  525861 ..  525884 +  -3.7  -3.72576   TACCAGAAACAGCAG          GGGGGGACT TCACAC AGAGCCCCC           TTTACTCCAACAAAC  54 59
        thiE  538849 ..  538870 +  -6.5  -3.61328   GGGCATACGCCCTCA           GGGACGGAT GAAG ATCCGCCTC            TTTCAGCATCTTCAT  60 458
 C1O47_02635  559654 ..  559666 +  -3.3  -2.70932   CTGGTCATCCGTCAC                GGAGG GGG CCTGC                TCCTTCAGCGGAGAC  40 469
 C1O47_02650  562784 ..  562812 + -13.2  -5.00616   GGTTTTCCCCACCAG        GGCATTCCGGTT TTTAC GGCCGGAATGCC        TTTTTTGCGGCACGA 100 49
 C1O47_02670  566862 ..  566878 +  -2.1   -3.1855   CAACCATACGTCCCC              GCCGGAA AAA TCCCAGC              TTCCCTGTTCAGGGG  42 353
 C1O47_02690  571477 ..  571490 +  -3.1  -4.46926   CTGCGGACATCAAAA               GTTGG TGCA TCAAC                TTTTCTCATCACCTC  64 214
 C1O47_02710 NONE
        lpxD NONE
 C1O47_02735  578757 ..  578784 +  -6.2  -4.60924   GGAACTTCCCTTCTT        CCCGGTCAG-GCC GAG GGCCCTCACCGGC        TTTTTGACGGATTTC  75 157
 C1O47_02760 NONE
        rpsU  584967 ..  584992 + -11.9  -4.89009   ACCCAATTTCCATGA         GGGCAACCCTT TCTC AAGGATTGCCC          TTTTTGCTTCCCTCT 100 65
        hemL  586361 ..  586375 +  -2.8  -2.78816   TGAGACAAATGACAG               GAACCA TGC TGCTTC               TGTCCTCAGCAGTCG  41 94
 C1O47_02775  587407 ..  587424 +  -8.3  -3.54919   GAAGCCCGCTAAATA             GCGGGCG CCAT CGCCGGC              TTTGCCCCCCTCCTT  67 29
 C1O47_02795 NONE
        ribH NONE
        nusB NONE
 C1O47_02810 NONE
        rlmN  598212 ..  598232 + -12.6  -4.17089   AAAGAACGGATGGAC            GCCCCGTT GACGG AACGGGGC            TTTTCCGAATTTGCA 100 16
        dnaB  599824 ..  599834 +    -4  -3.28924   ATTAACAATCCGGGG                 TCAA GAT TTGA                 TTCTAAGAGAAAATA  48 73
 C1O47_02825  601025 ..  601052 + -18.6  -5.07652   GTCTTTTTTCCTCAA        CAGCCTGTATGC CCAC GCATACAGGCTG         TTTTATTTTCAGGCG 100 54
 C1O47_02830  601980 ..  601999 +  -5.6  -2.71731   GCGACAGCGACATCG            GCTCCGGA GCGT TCCAGGGC             TCCTTCCGCCATCGC  46 235
         pyk NONE
 C1O47_02845 NONE
 C1O47_02890 NONE
 C1O47_02895 NONE
        dprA  615474 ..  615499 + -16.9  -4.72986   TTAATAGAGAAAAAA         GGCCGCGGATT ATCC GATCCGCGGCC          TTTTTCGTCCGGCTC 100 487
 C1O47_02905  616548 ..  616568 +  -9.7  -3.26722   TGACCCGCTATCAGT            CCTGCCTAT GTT ACAGGCAGG            TATTGTAGGTCTCCC  70 77
 C1O47_02910 NONE
        gcvT NONE
        gcvH  619306 ..  619331 +  -9.7  -4.87133   CATTCTTTCCTCCCC         CGCCCCGGTGAT TCC ATC-CCGGGGCA         TTTTGTTTGGCCCGT 100 43
 C1O47_02925  622255 ..  622280 + -11.2  -5.29716   CCTTCCTTTCAAAAA         GGCTGTTCCA TTCATT TGGAGCAGCC          TTTTTCTTATGTTCA 100 50
 C1O47_02930  623927 ..  623937 +  -6.8  -3.15249   CACGGCCCTCAAAAC                 GGCA CCA TGCC                 TTGATGACGCGTATC  54 401
 C1O47_02955 NONE
 C1O47_02960 NONE
 C1O47_02965  632263 ..  632277 +  -4.2  -3.56643   CGGCAGGCGGCATGA               CTGCGT CAC AGGCAG               TTTCCCCGCTATCCC  54 128
 C1O47_02970 NONE
        purM NONE
 C1O47_02980  635894 ..  635907 +  -3.1  -2.99859   CCGTGCATACGATTT               GCC-CT TGT AGCGGC               TCCCTTTTTTTGGGT  42 16
 C1O47_02985 NONE
 C1O47_02990 NONE
 C1O47_02995  638142 ..  638159 +  -5.5   -2.7419   GAACTCGCCCGCCGG             CGCACTT AAAA AAGGGCG              TGCTTCAAATCGTCT  48 120
 C1O47_03000 NONE
 C1O47_03005  639111 ..  639133 +  -3.4   -2.6062   CTCCATGCCTGTTTA           TTGGTTTGCC CCC GGAGAACTAA           ATCTTCTATCATGGA  40 56
 C1O47_03010  639716 ..  639740 +  -2.8  -2.62983   TGATCAGCACCCGCC         GGGG-GC-GGAT CTG AGCCAGCACCCC         TCGTATCAGCATGCA  40 12
 C1O47_03015 NONE
 C1O47_03020  643523 ..  643550 +  -5.5  -3.12895   GGAGACTCAACGCAG        CAGCCATCATC ATGGAC GCTGAAGGCTG         TGTATTGCTGGGCAA  51 86
 C1O47_03025 NONE
 C1O47_03030  645809 ..  645834 + -17.7  -5.32882   GCCTGCTTTACAGGG         GGCGGAAGTTC TTCG GAACTTCCGCC          TTTTTTATGATGATC 100 46
 C1O47_03040  649925 ..  649935 +  -2.4  -3.14602   AAAAGCATTGATAGG                 GAGG GAA CCGC                 TGTTACTGAGCTCCG  42 112
 C1O47_03050  651972 ..  651996 +    -5  -2.71712   TTGCCCCACGATCCA         AT-GCCGGCAT ATAA ATGCCGGCCAC          CTTTCCCAGAACCAC  48 54
        rsgA  653153 ..  653164 +  -2.2  -3.31144   CATGACTGATTCGCC                GTCA AAAT TGGC                 TTGTCAAACTGCAAA  44 32
 C1O47_03060 NONE
 C1O47_03065  654291 ..  654301 +  -4.6   -4.2558   TCTCCTTGAGCACGT                 CTGC CAG GCGG                 TTTTCATCACACCTG  65 149
 C1O47_03085  657365 ..  657404 + -14.2   -4.9725   TGGCACGGAATGCGC  CGGCGCAGCAGAAGGAGG GCAA TCTCCCGCTGATGCGCCG   TTTTTCTCTCCGCGT 100 61
 C1O47_03105 NONE
 C1O47_03110  664228 ..  664238 +    -4  -4.53034   TGCCATTCGCTCATT                 TTTC CAT GAAA                 TTTTGCTTGTCTAAA  66 485
        rplU NONE
 C1O47_03125  664949 ..  664978 + -19.3  -5.05079   CTCTATCTCCCTGCA       GGGGCGGCCATCC ACAG GGATGACCGCCCC        TTTTTCTGTCCTTCT 100 52
 C1O47_03130 NONE
        sufC NONE
        sufB NONE
 C1O47_03145  669045 ..  669068 +    -3  -4.21908   GAAACCCAAAAAGAC          GGAGAGACGG TCCC CTATCCCTCC           TTTTCCGTCCTGATA  59 53
 C1O47_03155 NONE
        bioB NONE
        bioA  676158 ..  676196 + -15.2  -4.79352   ATAATTTGACAAAAG   CCGGGATGCGGCAGCT ACAATAC AGCCGCCGCGCCCCGG   TTTTCTTATGAATGC 100 113
 C1O47_03170  677109 ..  677127 +  -8.2  -2.78596   CTTCGGGACAGGGGT             TTGTAAGG ATA CCTTGCAA             TCTAATACCGCCATG  59 80
 C1O47_03175  678246 ..  678278 + -19.9  -3.17075   CAACCTCCCTCCTTT      CATCCCCCGTTGCGT AAC GCGCATCGGGGGATG      TTACATTGCGGAGAG 100 58
 C1O47_03215 NONE
 C1O47_03280  699843 ..  699859 + -10.8  -3.31726   CGGGCGGCGGAACTC              CCGGCC AGGGC GGCCGG              TGTTCTCTGAAAAAA  73 42
 C1O47_03285 NONE
 C1O47_03290  703188 ..  703201 +  -2.3  -3.63515   ACCATAAACGCGCTC               CAGCT ATTG AGCAG                TTGTTCAAAATAGGC  48 154
 C1O47_03300 NONE
 C1O47_03305 NONE
 C1O47_03310 NONE
 C1O47_03315  707415 ..  707455 +  -9.9   -4.8622   TTCCCATTCTTTTCA  GGCATCCGTGATTCA AAAGTAACAAA TCAATCACGGATGCC  TTTTTCATTGAACGG 100 50
 C1O47_03320 NONE
 C1O47_03325  709499 ..  709534 + -19.1  -4.18018   CATGCTGATTTCCCG    GGCCGGAAGGGGAGG CAATGA CCTCCTTTTCCGGCC     TTTTCCGTACCCGGA 100 49
 C1O47_03330  710140 ..  710150 +    -4  -4.23892   ATTCTGGTATCTATG                 GAAA GGC TTTC                 TTTTGCCTCGTTAAC  61 101
        cysE  711127 ..  711149 +  -2.7   -4.2018   ATAGTTTCAACCTCA           ATGCATTGA AATTC TCAATGCGC           TTATTTTGAACATTT  59 149
 C1O47_03340  717062 ..  717092 + -19.8  -3.90744   GGAGTATATATCAAC       GGAAGCATCGCGGC CAT GCCGCGGTGCTTTC       TTGTTTACGGCGGGC 100 53
         tkt  721639 ..  721669 + -16.2   -4.7497   CTTCATCTCCTTTCA       GGGGCTGTTCCG CATCCGC CGGGACAGCCCC       TTTTTCATGCCTCCC 100 56
 C1O47_03365  724921 ..  724948 + -10.5   -5.0925   CTTTCCCCCCTCCCA        TGGGAGCCGGT CTTTCC GCCGGCCCCCA         TTTTTCATTTTACCA 100 45
 C1O47_03370 NONE
        purL  727851 ..  727864 +  -2.3  -3.01712   CCCCTATTATTGATC               TCCCG AAAC CGGCA                TCTTACCAAACAAAC  41 28
 C1O47_03380 NONE
 C1O47_03385  729452 ..  729480 + -13.1  -5.06414   AAAAACTTTTTCCAG        GCCCCGTCTGC TTCCTGC GCAGTCGGGGC        TTTTTATTCCCCGCC 100 52
 C1O47_03390  730698 ..  730737 + -10.8  -2.75183   GGACATGAACCGTCC TGCCGGGGAAA-GGCGCG CAAAAA CG-GCCATTTCCCCGGCC  TGCTTCCATGCGGCT  69 75
 C1O47_03405  735474 ..  735495 +  -5.7  -3.12999   GACTAAAGACGGAAT           CTCCGGAGC AAGC GCTCCGGCC            TTGCGTCTGCCGTAC  53 35
 C1O47_03410  737282 ..  737306 + -18.6  -5.00616   AAATCCGGCTTTCCG          GGCCGGGCGA TACCC TCGCCCGGCC          TTTTTTACGCCGCCA 100 51
 C1O47_03415  738838 ..  738869 + -23.1  -3.62224   AAAAACTCAACACAA      GGGCCGTCTCCCC CCTTAC GGGGAGACGGCCC       TTATTAAAGAAATAT 100 421
 C1O47_03435  744517 ..  744527 +  -2.4  -5.15969   TTGGTGCCTACAGCG                 CTGG CCT CCTG                 TTTTTTGGCTTCCAG  75 231
 C1O47_03465  747929 ..  747947 +    -9  -2.69964   AAAACATGCCGCATT             TTTGTCAT ATC ATGACAAA             TAATATACTTCCCGA  61 56
 C1O47_03470  748564 ..  748580 +  -2.2  -3.09878   TCACCCGGCAGACAG              GCACAT ACCGA ATGGGC              TGTTGCATCCATCCG  42 119
 C1O47_03475 NONE
 C1O47_03480  750566 ..  750595 +  -5.1  -3.20164   TCCTTCGCCCCGAAT      GCCCCGCGGATAT GCCGGA AT-TCCG-GGGGC       TTCCCTTCCCTGTAC  53 209
 C1O47_03525  755970 ..  755995 + -14.8  -5.64421   CCGCTCTTTATCAAA         CCGTCCGGAA AAGGTA TTCCGGACGG          TTTTTTCTTTGCAAT 100 56
 C1O47_03530  757612 ..  757641 +  -4.9  -4.62471   GTGAAAACCGGAGCT       GGCCCGGCG TCCCCCTTTTTC CGCCGGGCG        TTTTTGCAGGTTGAA  70 37
 C1O47_03535  758958 ..  758969 +    -3  -3.26449   AACAATGCGTGTTCC                TGAT TAAT ATCA                 TTCCATTATGTCCCG  46 59
 C1O47_03540  759769 ..  759792 +   -16   -4.8048   ACCCCCCTTTCTACA          GGCCGGTCCT TCAC GGGACCGGCC           TTTTTCATCTCCGGA 100 53
 C1O47_03545 NONE
 C1O47_03550  761412 ..  761422 +  -2.4  -3.12304   CGCAGGACGGATTTT                 TCCG GAA CGGC                 CTGTTTTTTCCTCCT  42 123
 C1O47_03555  763234 ..  763258 +  -6.3  -3.68798   CCACGGCAACATTCC          TGCCTCCCGGG CAT TCCGGGAACCA          TTCATTATTTTCACA  62 194
 C1O47_03560  764774 ..  764799 +  -8.3  -3.53091   ACAAGAAAGAAAAAA         CCCTGTAAACT ATTG GGTCTACAGGG          TTTCAAAAAAGGAAT  67 226
 C1O47_03585  767615 ..  767627 +  -6.2  -4.62904   TCAGGGTAAGCTGGC                GCCC CTGCC GGGC                TTTTTGAACCTGTTT  75 217
 C1O47_03595  768926 ..  768942 +  -2.1  -4.61527   ACCCTGTTGAACTGG              CAGAGGG AAG CCCTGGG              TTTTTAAGCGGTTTT  65 2
 C1O47_03605  770207 ..  770220 +  -3.8  -3.53012   AGTTGCCACCGCATC               CTCC ACTGAA GGAG                TTTCCAGGAACGCCG  52 17
        lpxK  771512 ..  771526 +  -3.6  -2.91735   ACATGCGTTGCCCTT               TTTCTT GAA AAGAAG               TATCTAAAATGTTCC  45 85
 C1O47_03615  772095 ..  772115 +  -2.5   -2.6162   GCCTGAAATGAAAAA            GGCAGTTTC CTC GAAAATGCG            GTCTTTACGCCCTTC  39 35
 C1O47_03620  776862 ..  776885 + -12.4  -2.96405   TTTTTCCCCTTCCGT          CGGCGGCC AAATATCC GGCCGCCG           CTCTTTTTCCATAGA  76 68
 C1O47_03625 NONE
 C1O47_03630 NONE
 C1O47_03635  779350 ..  779362 +  -9.1  -3.30798   AACCTAACGGGCAGA                TGGCG AAA CGCCA                TATTGATTCATTATC  67 85
 C1O47_03640 NONE
 C1O47_03645  781065 ..  781080 +  -3.2  -3.40899   GGCGATGCCGGCATC              CCGCAT TGCG ATGGGG               TTATGCTCAAACCTT  48 163
 C1O47_03660 NONE
 C1O47_03665  784595 ..  784622 +   -20  -3.73402   ATTTTTTACTGGAAA        GCCGCTTCATCC ACCC GGATGAAGCGGC         TTTCGTCCAAGGTCT 100 4
 C1O47_03675  785946 ..  785968 + -13.5   -5.1356   GCGGGCCTTCCTTTA           TCCTCCGGT CCTCA ACCGGAGGA           TTTTTATTGCTCCAC 100 94
 C1O47_03700  797565 ..  797580 + -11.8  -5.14563   TGTCCAGAAGAAACA              GCCGCC TCCG GGCGGC               TTTTTTCGTCCAGAA 100 44
 C1O47_03705  799261 ..  799289 +  -5.3   -4.7254   TGACAGCCCATCATC        CAGGGAGCT TGAGAAAGATT GGCTCCCTG        TTTTTCATGACCGCT  73 38
         maf  800000 ..  800014 +  -4.2  -4.30719   GGATTACCTGTCTGC               CAGGAA TGA TTCCAG               TTTATTGTAAAAGGC  66 141
 C1O47_03730 NONE
 C1O47_03735  807733 ..  807755 +  -7.6  -4.37067   AGAGCCACGCAAAAC           GCCTGCGGAA TTA TTCCGCCGCC           TTTTCCTCCTCTTTC  76 60
 C1O47_03745  810357 ..  810378 +  -2.9   -3.2241   AACAAAAACTCTCCT           CCAGATGAA CTCT TTCTACTGG            GTTTTCTACACGCTC  46 18
 C1O47_03750 NONE
 C1O47_03755  812079 ..  812100 +  -5.8  -2.54098   CAACGAACAGGCGTC           CGCCTGCGG CATTT CCG-GGGCG           CTATTCCTTCACCCA  49 58
         rnc  813515 ..  813525 +  -2.4  -3.72576   TAAGCCTTGGACACT                 CCTG TGG CTGG                 TTTGATAGACAGAAG  50 77
 C1O47_03770  815091 ..  815108 + -12.7  -5.14563   AATCAGCTTGGGCAG             GGCCGTG TATT CACGGCC              TTTTTTCATCAGGCC 100 178
 C1O47_03780  816860 ..  816895 +  -5.3  -2.87243   AAGCTTTCTCCGCCG    GCCG-CGCGCGCCG CAATTTCCC CGGCACGCGGCTGC    TCATTGTGGTCATGC  47 519
 C1O47_03805  820411 ..  820423 +  -3.3  -3.70571   CCCGAAGGAACAGTT                CGGGA AAA TACCG                TTTAAGGTATTTATG  53 226
 C1O47_03820  825080 ..  825116 + -18.9  -3.21099   CTCCGGCTGTTTAAA    CAAAACCCCGCGTGC CTGAGGC GCATGCGGGGTTTTG    TTCATCATCCGGCAG 100 51
 C1O47_03840  829639 ..  829659 +    -6  -3.56594   TACAGGCGGCGAATT            TGCCGGGC CCAGT GCCGGGCG            TTTGAGAAAGTTTGA  58 335
 C1O47_03850  830367 ..  830382 +  -4.6  -3.42996   CAGCAATTTCTTCAC              CGGCCA GGTC TTGCCG               TTGTCATAGCTCATG  52 308
 C1O47_03865  833450 ..  833475 + -11.9  -5.07011   AACTCCCTCACCAAA         GGGTGGAATCA TTTC TGATTCCTCCC          TTTTTCATTTCTATA 100 166
 C1O47_03875 NONE
 C1O47_03880  838188 ..  838213 +  -8.3  -5.07011   AGAACAGTCATCAAG         GGATGGAATCA GCAA TGGTTCCACCC          TTTTTCATTTCTATA  93 50
 C1O47_03910  846096 ..  846111 +  -6.8  -3.31501   CGCGCCGCCCGCCAA              CGGCCA GGGG TGGCTG               TTGTAAGCCATTCAT  58 4
 C1O47_03915 NONE
 C1O47_03920  848447 ..  848475 + -14.7  -5.61881   CCTGAACCTGTCACC        GCGCCTTTCCA TCTTTTC TGGAAAGGCGC        TTTTTCTTTTTCCGG 100 55
 C1O47_03930 NONE
 C1O47_03935  852325 ..  852349 +  -2.7  -3.06796   TGGGGAAATGCCAGA          GCCGGCTATTT TTT AACAAGCCGAC          TTAACTCCCCTCCGG  44 103
 C1O47_03940  853872 ..  853884 +  -3.3  -2.52464   CATGCCGCGCATGCC                CTGCG TAC CGCAA                TACATTAAAAGAACC  40 155
 C1O47_03950 NONE
 C1O47_03955 NONE
 C1O47_03960  858735 ..  858763 +  -5.1  -3.44848   TTGAGCATTTCCCCT        GCCTGCCTCAGGG GGC TCCAAAGGCAGAC        TCTTTCATGACACCG  54 37
 C1O47_03965 NONE
 C1O47_03970  860578 ..  860588 +  -2.4  -4.14392   TCCAACAGCTTTTAA                 GCAG GAG CAGC                 TTTTAGGGCTTCACA  57 9
        miaA  861727 ..  861737 +  -6.8  -3.80573   CACATAGTCTATCTT                 TCCG CGG CGGA                 TTTCCTGATACTGAC  63 190
 C1O47_03985 NONE
 C1O47_03990  865993 ..  866006 +  -2.5  -2.98122   CTATAGACTTATTTC               TATAA ACAT TTATA                ATTATTTCAATAATA  41 64
 C1O47_03995 NONE
 C1O47_04010  869366 ..  869378 +  -6.9  -4.08394   GCGCATTGTCTTCCG                GCCTG AAC CGGGC                TTTTGACGACCATAT  69 309
 C1O47_04015 NONE
 C1O47_04020 NONE
 C1O47_04025 NONE
 C1O47_04030 NONE
 C1O47_04035 NONE
        mraY NONE
        murD NONE
 C1O47_04050 NONE
 C1O47_04055 NONE
        murG NONE
 C1O47_04065  883861 ..  883873 +  -4.7  -4.11751   CCAGGTCATCGGAGA                CCGGG ACC CCCAG                TTTTAACCCATTCAT  61 7
 C1O47_04070 NONE
 C1O47_04075 NONE
        recA  887138 ..  887161 + -15.3  -5.36441   TACTGCCATTTCAGG          GCGGCTCCC CTTCCC GGGAGCCGC           TTTTTTCTCTCCGGA 100 62
 C1O47_04085  888265 ..  888277 +  -6.2  -2.55213   CCTGGGCCGGCAAGT                GCGC AGAAC GCGC                TGAGTTCCCTAACTG  49 10
 C1O47_04090  889093 ..  889107 +  -2.1   -2.7898   ATGTAAGACACAGAC               CGTGT CAGCA ATACG               TCCTTGCATCTTGAC  39 164
        leuC NONE
 C1O47_04100  891183 ..  891194 +  -5.8  -2.73542   GAACTGCCCCAGGTC                GCAG CCTC CTGC                 TGATTCAGCATTCAC  51 11
 C1O47_04105 NONE
 C1O47_04110 NONE
 C1O47_04115  895574 ..  895584 +  -3.2   -2.7263   GGACTAGGAATCCGC                 GAGC CAT GTTC                 ATTTGCAGCCCTCCT  41 34
        aroB  896911 ..  896925 +  -5.6   -3.9093   TCCTGTTCCGGCAGT               TCCCGC AGG GCGGCA               TTATTATGTGCTGCC  62 170
 C1O47_04155  902294 ..  902304 +  -2.4  -3.10715   ACGCCTTCAGTCCAT                 CCAC CAG GCGG                 TTCAGTCATGATGAA  42 4
 C1O47_04160  902799 ..  902812 +  -2.5  -2.85996   ACAAGTAACCATTCC               TTTTT ATGA AAAAA                CTTTCCTCCCTGCTG  39 33
 C1O47_04165 NONE
        lptB NONE
 C1O47_04175 NONE
         mpl  906900 ..  906910 +  -2.4  -4.46404   CCTGGTCGTAGGCAG                 CCTG GCC CTGG                 TTTTCCTGTTCCTTG  62 106
 C1O47_04185 NONE
 C1O47_04190  910244 ..  910263 +  -6.4  -2.62933   CTGGTGGAAGAGTGG            GAGGTGGA ATAA TCCAGCTC             TCCTCTCCCGGGTTG  50 14
 C1O47_04195  910960 ..  910983 +  -2.6  -4.62336   CAAAAAAATACTAAA          TTAAATAATT TCTA AATAATTTAA           TTTTTCCAATAAAAT  65 524
 C1O47_04200  914439 ..  914465 + -18.1  -4.29981   CTTGGTTATGGTAGG         CCCTTTCCCGC CCCAC GCGGGAAAGGG         TTTTCCGTATGTTTC 100 70
 C1O47_04205  915486 ..  915515 + -10.8  -5.08255   GCATGTCTGATTCCA       CCCCGGCTTATTC CTCAA GGA-AAGCCGGGG       TTTTCTTTTGCCGCT 100 49
 C1O47_04230 NONE
 C1O47_04235 NONE
 C1O47_04240 NONE
 C1O47_04245 NONE
 C1O47_04250 NONE
 C1O47_04255  926095 ..  926110 +  -4.6  -3.71848   AGGATCGTCCGGATA              AGGAGC ATAA GCTCCG               TTATTGGTGGAAACC  57 304
 C1O47_04265 NONE
 C1O47_04270  928478 ..  928497 +  -9.2  -3.53012   CTCCTGCGGAAAGAG            GGCAAGGC CTAC GCCCTGCC             TTTCCGAACAGGAGA  70 56
 C1O47_04275  929905 ..  929919 +  -5.6  -4.11692   GAAGCTCAAATAAGC               GAGGCC CCT GCCCTC               TTTTCCGGCTCCGTC  63 28
 C1O47_04280 NONE
 C1O47_04285 NONE
 C1O47_04290  933114 ..  933150 + -21.7  -4.15703   AACCTGCTTTTCAGA    CCGCCCGCTTCCTTC ATCTCCG GAGGGAAGCGGGCGG    TTCTTATTTCTGCCA 100 63
 C1O47_04295  934318 ..  934330 +  -5.5  -2.70932   AAGGAAGCACCCGCC                TTCCC TCA GGGAG                TCGTTGACGGACGGC  47 73
 C1O47_04300  935551 ..  935573 +    -9  -3.23452   AGCGCGGGCATCAAT           GCCGCCGGAC ATC GTGCGGCCGC           TTCCCTTGTCAGCGT  65 516
 C1O47_04315  940171 ..  940186 +    -9  -3.15999   CGAGGAAAAAACCTG              GGAAGC GCCG GCTTCC               TTCAGTATATCCACG  63 291
 C1O47_04325  943292 ..  943321 +    -5  -3.13403   ATGCATCTGATGGTC       TTCTATCCTGTC CGCCTT GACGGGACGGAA        TGTTCCTACCCCCAC  50 431
 C1O47_04335  945080 ..  945112 + -13.6  -4.17701   ATAAATAAATTCCCT      GGTTTCCGGAAAGG CCTGC TTTTTCCGGAAACC      TTTATCCTTTATGGA 100 37
 C1O47_04340  945769 ..  945785 +  -3.6  -3.14878   GCGGTGAATAAAGAA              TGGCCC TTCCC GGACCA              TGTTCCGTTCAGCCG  46 30
 C1O47_04345  946657 ..  946673 +  -6.5  -4.36914   TCCTGCATTAAAAGG              CCGGG AAAAAGC CCCGG              TTTTCTCCCGCACCC  74 30
 C1O47_04355 NONE
 C1O47_04360 NONE
        lysA  951308 ..  951339 +  -7.9  -4.06055   CGCCCATCTTTAGAA      TGCCCTTCCAGCG GTAAAA CGAAGGAGGGGCA       TTTCCTTTCAACCGT  71 52
 C1O47_04370  952637 ..  952664 + -18.6  -5.24129   ACGAGTTTAATGCCA        TGCCCGGTTTCT TAAA AGAAACCGGGCA         TTTTTTCTGGAAAAA 100 55
        ilvE  955935 ..  955958 +   -16  -5.46629   TTGGACCAACGAAAA          CGGCTCCGTC ATCC GGCGGAGCCG           TTTTTTTGCGCTATT 100 58
 C1O47_04390  957925 ..  957939 +    -5  -3.98826   AGGCAGCAATTCACC               CGTTAC CCT GTAATG               TTTGTAGGTTAATCC  63 149
 C1O47_04400  958620 ..  958631 +  -5.8  -4.20084   AAGCAATTACAGTGG                CCTC CAGA GAGG                 TTTTCCATAAGTAAT  68 39
 C1O47_04405 NONE
 C1O47_04410  961585 ..  961609 +  -7.7  -5.57729   TCCATTCCACTACCT          CCGGGGACGGC TAT GCCGTCCCTTC          TTTTTTATATTATTT 100 59
 C1O47_04415  962876 ..  962889 +  -2.3  -4.26903   GTCTTCCCGGTAGTG               GGGCT CCCA AGCCA                TTTTAGTGGCGTACG  60 197
 C1O47_04455  976224 ..  976234 +  -4.6  -2.78816   AAGCCTGAATGTCCC                 CGTC TTG GGCG                 TGTGCTACGGCATGC  45 265
 C1O47_04465 NONE
 C1O47_04470  979948 ..  979959 +  -4.4  -3.01497   GTAACGTTGAGAGAC                TCTG ATGG CAGA                 TATAGTTTCCCCTGA  47 21
 C1O47_04475  980439 ..  980449 +  -3.2  -3.90048   TAGACCATAGAATAA                 TGGA TAA TCCG                 TATTTTTAGAAACAG  54 60
 C1O47_04480 NONE
 C1O47_04485 NONE
 C1O47_04490 NONE
 C1O47_04495  982605 ..  982621 +  -6.6  -5.26316   GATTCCATCTTGGAA              CAGGAA ATAAA TTCCTG              TTTTTTATACGCTCA 100 76
 C1O47_04500  983632 ..  983642 +  -5.4  -3.65991   CTCTTGGTTCCACCT                 TGGT CGT ACCA                 TTGTATTAACGGGAT  59 6
 C1O47_04505  984517 ..  984533 +  -5.8  -3.53224   CACGCTTACGCTTCC              TGCCGT TTGGC ACGGCG              TTTGCGGACAGCGTC  59 157
 C1O47_04550  991786 ..  991815 + -15.7  -3.02144   AAAGCCGCTTCCACC       G-CCTGGCGCGGCG TGA CGCCGCGCCAGAAC       TGTTCCCGGGGATCG  83 386
 C1O47_04575  997019 ..  997033 +  -5.6   -4.6468   CTTATCCTCCCATTC               CGGATC AAT GAACCG               TTTTCTCTCATTTGC  73 46
 C1O47_04580  998116 ..  998126 +  -8.2  -2.74501   ACAGTTATGCTGTCA                 CCGG AAT CCGG                 CTTTCCCCCATTCAT  59 309
 C1O47_04585  999605 ..  999617 +  -3.3  -4.05446   TGTTCCAGTACATCA                GGACG TAT CTTCC                TTTGTCATTGACAAG  56 71
 C1O47_04590 NONE
 C1O47_04595 NONE
 C1O47_04600 1004414 .. 1004429 +    -6  -3.21416   CTGCTTTGCGGGAAG              CGTGCC TCTT GGCCCG               TTCCTCCTCCCGCTG  55 417
 C1O47_04640 1011807 .. 1011820 +  -2.3  -4.96106   CGCACCAGCATTACC               ACTGG TTGT CCAGG                TTTTTGGTATTTATC  70 401
 C1O47_04655 NONE
 C1O47_04660 1016183 .. 1016193 +  -4.6   -4.4078   TGGGGATGCTGCTGG                 GGGG AAT CCTC                 TTTTACTTCCAGGGG  66 466
 C1O47_04670 1018711 .. 1018723 +  -4.8  -3.25223   CTTCACGGTGACGGA                GGTG CGGCC CACC                TTGATAATATCCGTA  49 243
 C1O47_04680 1019455 .. 1019491 +  -3.7  -5.42862   AGGAAAGCGAAACTG    GAACAGGAAGAAAGCTG ATT CCGTTTTCTTTCATTTC    TTTTTTTCCGCCTGT  85 8
 C1O47_04685 1021052 .. 1021063 +  -2.2  -2.77233   TCTGCAAGGAAATCA                GG-GC ATT GCTCC                ATTTCCCGGTTGTCC  39 142
 C1O47_04690 1022366 .. 1022382 +  -6.6  -2.70788   TTCAAGAGAAACGAG              TTTCCG GCTAG CGGAAA              AATTTTTATAAATCC  50 261
 C1O47_04700 1023124 .. 1023143 +  -7.1  -4.25859   CTCATTTTTTCAATT            CTTCGGC TATTCT GCCGAGG             TTCTTTTCCGTTACC  71 111
        leuB 1027364 .. 1027383 +  -9.2  -3.61398   GTGACGCCATCATCG            CCGCCCTG TAAA CAGGGCCG             TTCTTCCGGCGCCGC  70 15
 C1O47_04735 1028560 .. 1028584 +  -4.4  -3.85296   TGATACGGAACATCA         GCTGT-CC-TTC CTT GAACGGAACAGC         TATTTTCCTTGTCAA  59 38
 C1O47_04740 NONE
 C1O47_04745 1031109 .. 1031129 +    -4  -4.63218   TCGAGCAATCACTGA            GGGATTAA CATCA TTAACCCC            TTTTCTTGCGCGGCG  68 18
        nifJ 1045786 .. 1045815 + -17.2  -5.14563   GCCGCTTAATTTCAA       CGCCCCTGTCCGG CTTAT CCGG-CAGGGGCG       TTTTTTACTGCCGGA 100 48
 C1O47_04815 1047388 .. 1047400 +  -3.3  -4.56597   TTTCAAATTCCTCCA                GTCCG TCC CGGAG                TTTTTCAAACCGCAG  67 303
 C1O47_04830 NONE
 C1O47_04835 NONE
 C1O47_04840 1052946 .. 1052958 +  -9.1  -2.64155   CTCCGCGAGCAGGCT                GAGGG TAT CCCTC                TCCATTTCAGAAAAA  61 47
        holA NONE
 C1O47_04865 1062187 .. 1062201 +  -2.2   -3.7108   CATCCTTGAGCCGTA               TATGAT CCC ATTATA               TTTCCCTGTCGCCAT  50 121
        dnaN 1065356 .. 1065381 + -15.5   -5.8187   GTTCATACAGAGGAA         CAGGCGTCGTG GAGA CATGACGCCTG          TTTTTTTATTGGCTG 100 59
 C1O47_04910 1072442 .. 1072456 +  -5.7   -3.9344   TAAACGCAACAGCAG               CTTGC AAAGG GCAAG               TTTGCTGTTAGAATT  64 64
 C1O47_04915 1076363 .. 1076394 + -15.9  -4.63486   TACCGTTTGAACAGG      CGCCCCGC-CGCTC TTTCC GAGTGCGCGGGGCG      TTTTATTGCCGGGCT 100 54
 C1O47_04930 1081344 .. 1081364 +  -2.5  -2.84229   GTTCCTGAAGAGTAA            TTCCTCCTG CCT CATGAGCAA            CTTTCCTGCAGATAT  39 26
 C1O47_04935 1082188 .. 1082204 +  -9.5  -3.89614   CTGTGTAGGCTCCAA              GACGTAT TCA ATACGTC              TTTATGAAGATTAAG  78 158
 C1O47_04940 1083010 .. 1083054 +  -4.9  -4.20516   TCGGCGTTAAAAAAC GGGCTTCCGGAGAGAAATTAA TAA TTTCTTAATGTCCGGAGGCCC TTTGTTAACTACCCG  63 48
        kdpA 1084889 .. 1084909 +  -4.5  -4.06502   CTTATCAGGGATTTG            GCTGCCGGG CAA CCCTTCGGC            TTTACTTTGCAAATC  61 225
 C1O47_04955 1087509 .. 1087529 +  -3.1  -4.91987   CCTTGGTTCCGCGTC            TTTCTCCGG TTA CCGGGGCGG            TTTTCTTATTGGATT  73 99
        clpB 1092137 .. 1092166 +   -15  -2.63631   TGCCGGAAAAACAAT       GAAGGGCGTCCC CTGAGA GGGCCGCCCTTC        TGATATAAAGATTCC  83 59
 C1O47_04980 1094606 .. 1094623 +  -2.7  -3.73072   GAAGCATGGCGCAAA             TGAAATC GCAA GATTCCA              TTTGGTCCAGCAATT  52 177
 C1O47_04985 1096285 .. 1096305 +  -2.4  -2.75708   CGCCTGGAGCGAAGC            CCGGCACG ACGTG CGTGACGA            CCTTTTTTCACCGAG  39 141
 C1O47_04990 NONE
 C1O47_04995 1096562 .. 1096581 + -10.8  -2.71924   GCGTGGCAAAGAAAA            CGATTGCT GAGA AGCAATCG             CTTTCCAACAAAGTG  69 80
 C1O47_05000 1099576 .. 1099592 +  -2.3  -2.95942   CTCCCCGTCGTGAAT              GACAA CTTGCTC TTGTC              TCATTTACCTGTGCA  41 50
         rrf 1099914 .. 1099953 + -16.4  -4.72497   GCCGGGATTTTTTTC  CATCAGGCCCCGCCAGTC CCTC GACTCGCGGGGCCTGTTC   TTTTCTTGCTCGGTC 100 34
 C1O47_05010 1100226 .. 1100248 +  -9.9  -5.65496   ATTGTTTGAAGAAAT           CCGGGAGAA AATAA TTCTTCCGG           TTTTTATTTTTCCTG 100 104
 C1O47_05015 1101986 .. 1101999 +  -2.3  -4.20707   AGACCTGGTACGGTC               CGGAA TGCT TGCCG                TATTTTTTAGTGGAG  57 46
        nrdR NONE
 C1O47_05025 1103525 .. 1103551 + -10.9  -4.08692   CGGAGATGAGCCGGA         TGAGGGAATGC AAGGG GCCTTCCCTCA         TTTTCCCCGAGGTTG  84 274
 C1O47_05040 NONE
 C1O47_05045 1107893 .. 1107909 +  -5.1  -4.68593   ATGATGCTCGCCCGG              GTGGAGA ATG TTTCCGC              TTTTTCCATGATGCA  76 183
 C1O47_05065 NONE
 C1O47_05070 NONE
 C1O47_05075 1117346 .. 1117356 +  -2.4  -4.60041   CCTGCACGGTGCCTA                 CCAG ATC CCGG                 TTTTTCCGGATGGCT  65 182
 C1O47_05095 1120893 .. 1120922 +  -4.3  -3.34716   AATGATGAAGCGGAA       CGGTTTTAAACGG TTAT CCGTTGAAAAGTG        ATTTTTGACGCGTAA  52 86
 C1O47_05100 NONE
 C1O47_05105 NONE
 C1O47_05110 NONE
 C1O47_05115 1127479 .. 1127493 + -11.4  -3.05046   TTTAATACCTGCACA               CGGGCA AGC TGCCCG               ATTTTGCCGCCCTCA  74 36
 C1O47_05125 1129442 .. 1129454 +  -5.5   -3.1149   GTAGGGAAGCCGTTC                GGCAG TTC CTGTC                ATTTTGCCATTGACT  51 37
 C1O47_05130 1132205 .. 1132219 +  -5.6  -4.81551   CTGCTGCTGTGCGTC               CGGCTG CCG CGGCTG               TTTTTCCTGTGCCTC  76 517
 C1O47_05185 1146247 .. 1146275 +  -8.7  -4.06419   CCATCCTCTGCAAGT        CCGGGTGCGGTAG GAG CCGCCGCATCCTG        TTGTTTCTCGCGGAG  77 13
 C1O47_05205 1149532 .. 1149559 + -16.4  -5.60993   TTTCAGGATTGTCTC        TCCTCCGGCATT GCGA GATGCCGGAGGA         TTTTTTTATGGAAGG 100 48
 C1O47_05220 1153957 .. 1153977 +  -3.8   -3.8709   CAGGCCGCAGCCTTG            ACCGGGCG CCTAA CGCACGGG            TTTGTCCGCACCTTT  57 25
 C1O47_05235 NONE
 C1O47_05240 1157540 .. 1157554 +  -3.4  -5.09521   CAGCAGGACCTCAGC               CGGTAG GAA CAGCCG               TTTTTCCTTTCTTCC  76 20
         efp 1158263 .. 1158289 + -17.3  -5.14563   TCTGTTCTTTGAAGA         GCCCCGTCCGG TTTGT CCGGATGGGGC         TTTTTTCATGCCGCA 100 53
 C1O47_05255 1162050 .. 1162071 +  -2.1  -4.25104   ACCAGCAGGGGGGTG           GCATCCTTG TGGG CCAGGGCGC            TTTTAATCGCCAGCA  60 360
 C1O47_05265 NONE
 C1O47_05270 1165081 .. 1165099 +  -2.2  -4.39226   TTTTCCGGTGTGCGT             CCCGGAGT AGA GCCGCGGG             TTATTTTATCCTTGT  60 47
 C1O47_05275 NONE
 C1O47_05280 NONE
 C1O47_05285 NONE
 C1O47_05290 1167033 .. 1167062 + -20.1  -4.82901   GTGCGCGGGATGACC       TCCCCTTGTCCGG ATTT CCGGACGAGGGGA        TTTTTATGCGGGCCG 100 84
 C1O47_05325 NONE
 C1O47_05330 1177177 .. 1177191 +  -8.6  -3.92832   GCGCCATTTGAACAG               CGGATT CGA AATCCG               TTATTTAGCGGCTTT  72 394
 C1O47_05335 1180253 .. 1180270 +  -2.5  -3.85698   CTACCACCGCGTGAA             CGCAGGG GTGT CCCGGAG              TTTCTAAAAGAAAGC  53 1
 C1O47_05340 1180792 .. 1180843 + -17.4  -4.13014   AACCGTCTACAGCCG GAAACAGGCGCCGCCCTGCCAGG TAAAAAC CCTGGCAGGGCGGCGT-TCTTCC TTTTCGGAATATCCA 100 49
 C1O47_05365 1187391 .. 1187414 +  -5.2  -3.09648   AAGATTGGGAAAAGA          GCAGGGAAAA AGCT TCTTCCCGGC           TGTTCCCGTATGTTA  51 69
 C1O47_05370 1188760 .. 1188773 +  -3.1  -4.59109   AAGGCTGATTATTTA               TTCCT GCCG GGGAA                TTTTTCAGAACTATC  64 153
 C1O47_05395 1195110 .. 1195130 + -13.3  -3.04398   ACGATTGTACAGTAA            TGCCCGGAA AAT TTCCGGGCG            CTTTTCCGGAAGAAA  81 26
 C1O47_05415 1199950 .. 1199978 + -11.9  -3.57263   CGGCCTGCGCCGTGC        GGAGATGAGGAAT TGA ATTCTTCATTTCC        TTTGCCGATGCAGAT  79 327
 C1O47_05425 1202117 .. 1202134 +  -2.7  -3.55444   GGTGGCCGCGGTCCG             CCATG TTCAGTTT CATGG              TTTGGAACGTGGGGA  50 258
 C1O47_05440 1204673 .. 1204686 +  -8.1   -2.7263   AGGAGAAAAGGCCCA               GGCCT GAGC AGGCC                GTTTCCGCCCGTCCT  59 19
 C1O47_05455 NONE
 C1O47_05460 NONE
 C1O47_05465 NONE
 C1O47_05470 1212949 .. 1212970 +  -8.1  -2.82516   GTGCAGAACACGCAA           TGCTCCATGT GAA ACATGG-GCA           TATGCTGATGCAGAG  57 421
 C1O47_05495 1219414 .. 1219430 +  -5.7  -4.36914   GCCCGATGCGGTAGG              CCCGGTC CGT GGCCTGG              TTTTCTACAGCGGGG  72 296
 C1O47_05530 1224991 .. 1225034 +  -8.1  -3.43151   AGCCCGGCTCCTGGC GGGCTGTTCCCTCCCTGCGG AATTC CCGCATCC-GGGAACAGTCC TTCGTTCATCGTTCC  65 52
 C1O47_05535 NONE
 C1O47_05540 NONE
 C1O47_05545 NONE
 C1O47_05550 NONE
 C1O47_05555 NONE
 C1O47_05560 NONE
 C1O47_05565 1228645 .. 1228679 + -18.6  -3.00128   AGCCTAATCACATTT     GGCGAACCGGGTCATG CAG CTTGACCCGGTTCGCA     TCATTGTGTTTACTG 100 34
 C1O47_05570 NONE
 C1O47_05575 NONE
         map NONE
 C1O47_05585 NONE
 C1O47_05590 1234570 .. 1234582 +  -4.8  -2.73159   GTCGTGCTGGCGTCC                CAGC GGTAG GCTG                ATTTAAAAAACTTCC  45 17
        ppk1 1237152 .. 1237174 +  -3.3   -5.5112   CGGAACGTTTTCAAA           TTCGGTTCC GCGCA GGAGCCGTG           TTTTTTCTTCATCCC  88 476
 C1O47_05640 1245622 .. 1245671 +  -5.5  -3.83561   GGCCCGCTTTGGCCA GCACGATGGGGGCGGCGCAGATGG CGG CCACCAGC-TTGCCCGCTTCATGC ATTTTTTTGACCAGA  59 350
 C1O47_05690 NONE
 C1O47_05695 NONE
 C1O47_05700 1257582 .. 1257592 +  -2.4  -5.00616   CCTGCTGCCTTGCCG                 CCCG TTA CGGA                 TTTTTTCCGGAAGCG  70 106
         xth 1262610 .. 1262626 +  -5.8  -3.66424   GTCAGCCTGGAGATT              GACTGC TGAGC GCGGTC              TTTCAGATGATTTTC  62 17
 C1O47_05725 1263657 .. 1263678 +  -8.7  -3.29144   AAGATGGAGCCGGAC           GGAAGGGGT GAGC AGCCCTTCC            TTCTCCAGACGCTCC  65 405
 C1O47_05735 1265016 .. 1265030 +  -9.2  -3.98661   GTGGAGGGCCAACTT               TCCGCC TCC GGCGGG               TTTATGATAAATATG  77 76
 C1O47_05740 1266860 .. 1266886 +  -4.2  -4.57341   CTTCAAACTTCCCTT         TCGGGAGGGCTG TGT CTGTCCATCCGG         TTTTTCGGGGGAATT  71 164
 C1O47_05750 1268862 .. 1268872 +  -2.4  -4.10953   GGGAATCCGCCGTTC                 GCGC TGG GAGC                 TTTAATTTAATGCGT  55 10
 C1O47_05755 NONE
 C1O47_05760 1271328 .. 1271340 +  -3.3  -3.41051   TAATTGCTTTTCTTC                CGGAA CGG TGCCG                TTATGCTACGGCTCA  47 87
 C1O47_05765 1272202 .. 1272212 +  -6.8  -3.40867   GTGCGGCTCCCGTGC                 CGTG CTG CACG                 TTCGTTGCTGCCTGG  60 138
 C1O47_05780 NONE
 C1O47_05785 1274716 .. 1274734 +  -5.2  -2.53581   CGTCCCGGCAGTGCT             TTTCGCCC GTG GGGCAAAG             TAGCTTCCAGGTCTC  47 4
        galK NONE
 C1O47_05795 1278465 .. 1278488 + -14.6  -4.62069   GTCCCGTATTTTCAA          TCCTCCCGGT TCAG GCCGGGAGGA           TTTTTCACGTCCGGA 100 58
 C1O47_05810 NONE
 C1O47_05815 1283692 .. 1283704 +  -4.7  -2.71011   GAACGGCCAAAATCG                GCTGG AAA CCTGC                TGCTTCCGGCGCCGT  44 42
 C1O47_05820 1284081 .. 1284111 + -17.6  -4.72272   TCCTTTATTACAAAA       GCGGCTTCCCTGTC CAA GGCAAGGAAGCCGC       TTTTTCATGGAAAGC 100 57
 C1O47_05825 NONE
 C1O47_05830 1285447 .. 1285465 + -10.2  -3.34398   AACGCGTCAGTAAGG             CCGCCGTT CAT ATCGGCGG             TGTTTGCGCGGGGCC  75 28
 C1O47_05835 1286352 .. 1286362 +  -2.4  -4.22346   ACCGTTCGTGGCTGG                 CGAC CGT GCCG                 TTTTGAGTCACTTTC  57 510
 C1O47_05860 NONE
 C1O47_05865 NONE
 C1O47_05870 1296701 .. 1296715 +  -6.4  -4.62872   ATACCGGCACAGGCG               CAGTAG CAG CTGCTG               TTTTTGAAGATTCAT  75 263
 C1O47_05885 1298931 .. 1298959 + -11.1  -5.36441   CGAAAAATCGGCGGA        TGAGAGCTGTTCT TGC GGAACAGCTCTTG        TTTTTTATATCCAGA 100 53
 C1O47_05900 1301036 .. 1301046 +  -5.4  -3.58731   GCGATATCTTCCACG                 GAAC CTT GTTC                 TTTCAAAGGTATTTT  56 139
 C1O47_05915 1302820 .. 1302830 +  -2.4  -4.27316   CCAGCACGGTATTTT                 CCGG ATT CAGG                 TTTTCCGTTCGCGCC  60 494
 C1O47_05925 1305303 .. 1305334 +  -8.6  -4.77759   CGGCATTACAGAAAA      GAGCAGGACCCCCG GTTT CTGAAGTCCTGCTC       TTTTTGATGCGTTAT  87 496
 C1O47_05935 1306411 .. 1306435 + -12.2  -5.26875   GTAACCATTTGAAAA          CCCTGCAAGT TCATT GCTTGCAGGG          TTTTTTCGTTACGGA 100 34
 C1O47_05940 1306910 .. 1306930 +  -2.6   -5.6473   TAACATGAGAAACGT           CG-CCA-CCA ATG TGGCTGGTCG           TTTTTTTCATGTTGT  84 33
 C1O47_05970 1313949 .. 1313974 + -11.9  -3.33696   GCCTGCGGCATTCTG         TCCGGAGCGGA ACGG TTCGTTCCGGA          TTGATTGCCGGGCCG  79 64
 C1O47_05975 NONE
 C1O47_05980 1320115 .. 1320140 +  -2.6  -4.54727   ATGGAACGGCATGGT         TCC-CTCTTCC CATCC GAAAGAGTGGA         TTTTGGTTTCAGAAG  62 184
 C1O47_05985 NONE
 C1O47_05990 NONE
 C1O47_05995 NONE
 C1O47_06000 NONE
 C1O47_06005 NONE
 C1O47_06010 1323800 .. 1323817 +  -2.5  -5.86061   TCATTTTCAAAATCC             CACACGC GGCG GCGGGCG              TTTTTTTTCGTCCGC  95 80
 C1O47_06055 1330337 .. 1330371 + -17.9  -4.41353   ATTCCGGCATTTACT    CGGCGGAGCGCGGCGC GGGG GCGCC-CGTTCCGCTG     TTTTCCTCTCTCTGC 100 45
 C1O47_06060 1332855 .. 1332873 +    -3  -4.46757   CGTATACATTTCTGA             GCAAAGAC AAG GACATTGC             TTTTCTCCGTGTATT  64 494
 C1O47_06085 1337448 .. 1337483 + -19.9  -2.66748   ATCGAATACATAATT    CAGTGCCCATCGGTT TTCTTT GACCGATGGGCACTG     CTCTCTTTATTGTAG  95 330
 C1O47_06160 NONE
 C1O47_06165 1355250 .. 1355274 + -10.1  -2.82606   CCAATTTTTTTTATT          GATACCGGATT CAA AATCCGCTATC          TCCGTTTTATAGTTA  65 157
 C1O47_06170 1356027 .. 1356050 + -14.6  -5.95286   ACAAATTAATCATAG          GACGGTCTCC GCAT GGAGGCCGTC           TTTTTTATTTTTACT 100 57
        bamA NONE
 C1O47_06260 1383767 .. 1383787 +  -5.3  -3.34398   CGGTGATGATTCCCA            TGGAGCCGT GAT GCGGATCCG            TATTTAGCCAAGCCA  54 15
        metF NONE
 C1O47_06270 1385588 .. 1385620 +  -9.3  -3.76373   TGAACGCTTTTTCCA     TCCGCATGT-CTGT TTTTTT ACAGTGCATGCGGA      TTTCCGTATTCAGGA  73 74
 C1O47_06275 1386197 .. 1386210 +  -2.3  -3.59315   GAGCGCCCAGGTCAT               GCGTT GTCT GGCGC                TTTCCGGATCATTGA  48 154
 C1O47_06325 1398260 .. 1398278 +  -8.8  -3.48593   CAGCTCCTGCCCCAG             CTCCACCA TGC TGGGGGAG             TTGTCTACGGCGATC  66 520
 C1O47_06335 NONE
 C1O47_06340 1401475 .. 1401507 + -12.1  -5.79595   GGTTTTCTTTTCCTG     GCCGTTCCGCGCAGG CCTGT CC-G-GCGGAACGGC     TTTTTTGTTTTCCCG 100 50
 C1O47_06350 1404057 .. 1404074 +  -3.5  -2.87468   GTCCATAAATTGTTT             TTTTATC CCAT GATGAAA              TATGCTGTGATCGGA  45 45
 C1O47_06355 1405363 .. 1405384 +  -5.9  -4.58685   TGTGGTGTATTTGAA           CGGG-GGATT GTA AATCCGCCTG           TTTTTAAAAAAGTTT  73 57
 C1O47_06360 1406768 .. 1406778 +  -6.8  -4.81551   TCTTGTAGGCGGGAT                 CGTC AAT GACG                 TTTTTCATCTGCATG  79 288
 C1O47_06370 1410511 .. 1410556 +  -9.6  -3.28712   GCAGGCAGTTCAGCT GGGGTGTGAGGCGGGGCC-CT ACGAC AGAGGCCCCGGCGCACAACGC TTCTGCGGAGGCAAG  68 255
 C1O47_06400 1415992 .. 1416007 +  -2.4  -2.75891   ATGCCTGTATGAAAT              GGTGCG GCAG CGTTCC               TGATTCCATGACTGT  39 7
 C1O47_06405 1417105 .. 1417121 +  -7.9   -4.4448   ACTCCATTCTGACGG              GTGCGCC GCC GGAGCAC              TTTCTTTCACCGTTT  77 265
 C1O47_06415 1417739 .. 1417760 +  -9.5  -5.27477   CAAGGGATGGTTCAT           GAG-GGGATG GGC CATCCCTCTC           TTTTTTGCTTCAGGT 100 62
 C1O47_06430 NONE
 C1O47_06435 1422162 .. 1422202 + -21.3   -4.0825   CTGCATGACCTGGCG  GCAACGCCGCATTCTCGAT CAG GTAGAGGATGCGGCGTTGC  TTATTTGATTACGGA 100 181
 C1O47_06440 1423053 .. 1423067 +  -6.4  -4.78107   TGGGATAACCGGGGC               CGGGAT TTA ATCCTG               TTTTTCGTGGTCGTG  78 118
 C1O47_06480 NONE
        cadA 1432684 .. 1432696 +  -2.7  -4.07568   TTCCGCGTTATTCTG                TGTCT TGG AGATA                TTTTGCAGGAGAGCC  58 230
 C1O47_06520 NONE
         lgt 1444568 .. 1444582 +  -7.1  -3.60234   TGTTTTGGGAATACT               GCTGG CGGGA CCAGC               TTTGAAAATATCTGC  60 64
 C1O47_06535 NONE
 C1O47_06540 1447757 .. 1447773 +  -6.5  -3.86795   AGGCATCATTGAATA              CCCGCTT AAC AAGCTGG              TTTACTAGATTTTTT  67 1
 C1O47_06545 1447983 .. 1448012 + -12.9  -5.51046   ATTTCCGGAAAATTC       CGGCGTCC-TCCTT ATC ACGGAAGGACGCCG       TTTTTTATGTATTTG 100 80
 C1O47_06550 1449571 .. 1449593 +  -3.4   -4.0162   TTTTCTCTGTATTTT           TTATCAGTGG TTG CTGCTGAAAA           TTTATCCTATCAGCG  56 282
 C1O47_06555 1451722 .. 1451736 +  -7.8  -4.07568   CCGTGACGGTGATGA               CGCAGG CGT CCTGTG               TTTTGGCGGCGGCCA  71 464
        ilvD 1455551 .. 1455577 +  -6.6   -3.7282   AGGGTGCGGCGCCCG        CG-CGCTTCCC CGAAGA GGGAAGTGACG         TTCTTCATCGCGTCG  63 263
 C1O47_06580 1456397 .. 1456427 + -17.2  -3.36749   TCTAATAAATAGAAA       GAGTGAAAGTAATT GCA AATTACTTTCACTC       TTAGTATTCAGACTA 100 246
 C1O47_06610 1464365 .. 1464376 +    -3  -2.52516   AGGCTTTTTCTCTAA                TCTT GACA AAGA                 ATTAATAGTAAAGGC  39 522
 C1O47_06640 1473746 .. 1473756 +  -3.2  -4.85599   TCCCTGGGCAGGAAG                 TAGC CGC GCTG                 TTTTTCTGAGATGGG  70 346
 C1O47_06650 1476068 .. 1476083 +    -4  -3.61894   CTGTCATATTTCCGG              TAGCGA TGAT TCGTTA               TTATTGGGGGAGGTT  52 124
 C1O47_06655 1478307 .. 1478327 +  -9.7  -3.53811   GCTTGTATAATTGCC            GGAAACCAG AAT CTGGTCTCC            TTTGAAGGAGATGGC  70 373
 C1O47_06665 1481812 .. 1481843 + -14.5  -5.31275   ACTAAAAATAGTCAT      GGCTTCCAGTCCT TTCGTT AGGGCTGGGAGCC       TTTTTTATCCTGGAC 100 75
        rsmA NONE
 C1O47_06700 1490800 .. 1490811 +  -3.6  -2.96031   CTGGAAGCAGGAACT                TGCC GGGT GGCG                 GTTATTTCCAATAAA  45 72
 C1O47_06705 1491249 .. 1491260 +    -3  -4.36914   ATTCATAATCCTTTC                TTTC ACTT GAAA                 TTTTATGGCAAAAAA  61 66
 C1O47_06725 1495909 .. 1495937 + -16.8   -3.3972   GGGCGCACCAAACAA        GGCCCTGCAAGT TAACT GCTTGCAGGGCC        TTACTGGTTTTATGA 100 31
 C1O47_06745 NONE
 C1O47_06750 1499888 .. 1499925 + -25.1   -4.7261   AGACCCTCCCCATGA   GCGGCTAGCTGGATGAA CTTA TTCGTCCAGCTAGCCGC    TTTCTTTTGATAAAT 100 57
 C1O47_06755 NONE
 C1O47_06760 NONE
 C1O47_06765 NONE
 C1O47_06770 NONE
 C1O47_06775 1505019 .. 1505037 +  -8.8  -3.49048   AGTCCGTGTCCTGAC             GGGCATGG TCT CCATTCCC             TGTTCTTCCTTCCCC  69 27
 C1O47_06780 NONE
 C1O47_06785 1511736 .. 1511766 + -22.8  -4.57569   GCGATTATTTATTTA       TCATCCGGCATGCA ATC TGCATGCCGGATGA       TTTTTAGGGCAATAA 100 140
 C1O47_06790 1513016 .. 1513033 +  -5.7  -2.75064   ATATATTAGCGATAT             TTATGAT TTAG ATCATAA              TAGTTGGCTGCAAAC  51 287
 C1O47_06795 1513603 .. 1513629 +  -8.7  -5.75538   ATAATTAAATTCAAA         CCTCTCCTGTC CTAGT GGTGGGAGAGG         TTTTTATTTTTTGAA 100 145
 C1O47_06800 1516779 .. 1516813 + -13.8  -5.14965   ATTTTCTACGAATTA    CAACCACTCAG-GGA CTGTTA TCCTCTGAGTGGTTG     TTTTTTAATAAGCAT 100 343
 C1O47_06805 NONE
 C1O47_06810 1518571 .. 1518597 + -12.4  -5.48303   TATTTTTATTAAAAA         CTCCTTCCAAAA TCA TATTGGAAGGAG         TTTTTTTGAAATTAT 100 104
 C1O47_06815 1519987 .. 1520004 +  -3.5  -3.34398   CTTTGAGGTGTATCA             CTTTTTT AGAT AAAGAAG              TATTTGAAAAAGCGC  50 135
 C1O47_06820 1520398 .. 1520420 +    -2  -2.78679   TGTGGGAATCGGCTA           TTCTGACG CCACGCC TGTCAGAG           CTTTACATACAACCA  39 20
 C1O47_06825 1521120 .. 1521136 +  -5.2  -3.57651   TATATTTTTTTTGAA              TGCAAA AATGG TTTGCA              TTATATGCTGTCCAA  56 354
 C1O47_06835 1522718 .. 1522742 +  -6.4  -5.09895   TTTAATTTTATAAAA          GCTCCTTCTG TTTAT CGGAAGGAAC          TTTTTTACATAAATG  86 84
 C1O47_06840 1524077 .. 1524087 +  -5.4  -3.02371   TTCTCTTTTTGTATG                 TCCA GTG TGGA                 TGATTATTTCAGCAA  49 505
 C1O47_06845 NONE
 C1O47_06850 1525159 .. 1525184 + -12.6  -4.96848   TGTATGGGATTCAAG         CTGCATCCGG TATGTT CCGGGTGCAG          TTTTTGTGTAAACGG 100 268
        kdpF NONE
 C1O47_06860 NONE
        kdpB 1529512 .. 1529522 +  -4.6  -4.37763   CAAACTGATTGATAT                 GGTC GTC GGCC                 TGTTTTTTTAACTGA  66 4
 C1O47_06870 1530208 .. 1530247 +   -13  -3.81137   CTTGAAAAAATGAAA  TCGATTGCGGGC-TTCACG TCA TGGGAACGCCCGCAATTGA  TTTACATCTTTAAAG  87 96
 C1O47_06875 1531602 .. 1531612 +  -2.4  -5.55855   TTACCATTCCCGGGC                 GGTG CGG CCCC                 TTTTATTTTTTTCCG  84 184
 C1O47_06885 1532861 .. 1532882 +  -2.3  -2.77344   ATTCCGGCCGAATTG           GTAGATTTCC CTA GGGAA-CTGC           ATTCTTGAAAAGTGA  39 104
 C1O47_06890 1533170 .. 1533196 + -17.3  -4.14739   CGCCGCCATCTTATC         TGCTGCCGGGC CTGCA GCCCGGCAGCG         TTTTCCCATCAATAA 100 42
 C1O47_06895 NONE
 C1O47_06900 NONE
 C1O47_06905 1537201 .. 1537219 +    -6  -4.64861   GCAGGCGGAGTGTCA             GATGCGTT CCT GATGCATC             TTTGTTTTCCGAGCC  76 146
 C1O47_06910 1538811 .. 1538851 +  -2.6  -5.15969   TATGCCTCGCAGCAC  TGGCCGATATACTCCA TTTTGATTT TGGAGTATTTCAGGCA  TTTTTTCAGTTCCCG  75 338
 C1O47_06925 1540438 .. 1540454 +  -6.5  -2.81966   CGTACGGGAATTGAT              GGCGG ATATCGC CCGCC              TGTGCTGAAATTTCC  53 1
 C1O47_06930 1542337 .. 1542357 +  -6.8  -4.29738   GATATTTCCGGCATG            CGTTCCGC CAGGC GCGGGATG            TTTTCCTCACTGTAG  71 475
 C1O47_06970 1553905 .. 1553926 +  -5.1  -3.04517   GGCGTGCCGCTGCCC           TCTCCGG TCCGTGTT CCGGAGG            CTTTTCCGACGGACT  51 307
 C1O47_06975 1555072 .. 1555087 +  -2.6  -3.88766   TGTTCTAACATTTTT              GGTATGT CCG AC-TACC              TTTCCTCTCTGGGCT  53 101
 C1O47_06980 1555907 .. 1555940 +  -5.1  -4.43477   CAGCATGTTTTCAAA     GGCCTTGGCGCGGAG CATG TTCGGTCCCATGGCC      TTTTCCTTCAATGCC  70 174
 C1O47_06990 NONE
 C1O47_06995 NONE
 C1O47_07000 1558802 .. 1558830 + -16.3  -3.33696   ATGGATATGTTGGCA        TTCATCCAAACAT TGG ATGTTTGGATGAA        TTACTTAAAGAAGGA 100 60
 C1O47_07005 1559851 .. 1559889 + -20.3  -3.03903   TTCTTTTATCTGGAA   CGCGTGCCGTTCCGCCG GAATG CGGCGGAACGGCACGGA   TATTCCCGGGCTTTT 100 44
 C1O47_07010 1560719 .. 1560729 +  -2.6  -4.72272   GGCGTCTCTGGACCG                 TTAT CCG ATAA                 TTTTTCATGAAGCAG  65 15
 C1O47_07015 1561443 .. 1561470 +  -3.4  -6.09196   TTAAATTAACGGAAC        AGGCGATTCC-CA TCA TGCGGAATCGGCA        TTTTTTTCTTTTCGG 100 37
 C1O47_07020 1563495 .. 1563528 +  -8.2  -3.06515   CGCGTGACCCTTCCG     AGGGAGCTGGAA GGGGCGAAGG TTCCAGCTCCCC      ATTTTGAAAATGACA  62 34
 C1O47_07025 1564484 .. 1564496 +  -5.5  -3.53012   CAAAGTCATGGAACG                CCGGA GGA TCTGG                TTTGCGGAAACGAAG  56 64
 C1O47_07030 1566132 .. 1566146 +  -2.7  -3.32997   CGGAGAATGTGCTCT               CCGGG AAGGG CCAGG               TTGCCTTTATCCCGG  46 184
 C1O47_07045 1568147 .. 1568187 +  -8.4  -3.36273   CGGCATGCCGGAACG GGGCCTTGATTCCGT-CCCG TTC CGGGTATGGAAT-GAGGCGC TTACTATTAAAACCA  65 134
 C1O47_07050 1569468 .. 1569496 + -16.7  -3.53855   TTTGGACAGACTGCC        CAGGTCGCGGTGT CTT GCGCCGCGGCCTG        TATATTTTTACCGGG 100 50
 C1O47_07055 NONE
 C1O47_07060 1572699 .. 1572728 + -20.1  -3.29461   TATTTGTAATAAAAA       GAACCGCTCCGGG AATC TCCGGAGCGGTTC        TTATAAAAGAGATTG 100 265
 C1O47_07080 1574946 .. 1575001 + -11.2  -3.05715   AGGAAGTTTTTGCGC TTTCCCGTACTGCGGAATGCTGGAAG GACG TTTTCAGCGTTCCGTGGTTAGGGGAG TTGGCTGGCGGCGTT  74 50
        ispE 1580209 .. 1580245 +  -2.2  -2.74782   GCAGGAGGCCTTGCC   TTGACGGAGGGGGA-GG CATG CCGTTACACTCCGTCCA    TGATTAAGAGTTTGT  39 53
 C1O47_07110 NONE
 C1O47_07115 1582835 .. 1582847 +  -7.7  -3.14468   TTTTTCAGAATGCTC                CGGAA TTG TTCCG                TTGCCTCTCCTGCCG  59 44
 C1O47_07135 1586300 .. 1586320 +    -9  -2.54896   ATGTTGATGGAAACG           GC-CCTGCC GTCC GGCAGGAGC            TGCATTCCCTGGACA  58 253
        purH 1590808 .. 1590818 +  -2.4  -3.80516   GCCATGGTATTTACG                 GGGC ACC GCCA                 TTTCCTCCATTAATT  50 2
 C1O47_07165 NONE
        acpS 1592322 .. 1592339 +  -7.7  -2.57931   GATAGAAACGGTTGC             GGTGCTG GCAG CAGTACC              ATTATCAAGAGTAAC  53 315
 C1O47_07185 NONE
 C1O47_07190 NONE
 C1O47_07195 1598003 .. 1598015 +  -7.7  -3.28791   GTTTTTCTGCCGTTT                GCTGA CGG TCAGC                TTGTAAGAGGCGCAT  61 45
 C1O47_07200 1598596 .. 1598625 + -16.5  -5.00616   AAGACCTTTGACTGG       TAAGGCCGCCTCC TGAA GAAGGCGGCCTTA        TTTTTTAAGGAAGGG 100 57
 C1O47_07220 1604973 .. 1604987 +   -10  -5.00895   AGAACAAAGCGGATG               GTTCCG GCC CGGAAC               TTTTTGTCTGATGCC 100 351
 C1O47_07235 1607344 .. 1607361 +  -2.7  -3.73072   GAAGCATGGCGCAAA             TGAAATC GCAA GATTCCA              TTTGGTCCAGCAATT  52 177
 C1O47_07240 1609023 .. 1609043 +  -2.4  -2.75708   CGCCTGGAGCGAAGC            CCGGCACG ACGTG CGTGACGA            CCTTTTTTCACCGAG  39 141
 C1O47_07245 NONE
 C1O47_07250 1609300 .. 1609319 + -10.8  -2.71924   GCGTGGCAAAGAAAA            CGATTGCT GAGA AGCAATCG             CTTTCCAACAAAGTG  69 80
 C1O47_07255 1612314 .. 1612330 +  -2.3  -2.95942   CTCCCCGTCGTGAAT              GACAA CTTGCTC TTGTC              TCATTTACCTGTGCA  41 50
         rrf 1612652 .. 1612691 + -16.4  -4.72497   GCCGGGATTTTTTTC  CATCAGGCCCCGCCAGTC CCTC GACTCGCGGGGCCTGTTC   TTTTCTTGCTCGGTC 100 34
 C1O47_07265 1615453 .. 1615468 + -11.8   -4.3255   GAAAAAAGGAAGAAG              GGGGGG ATTT CCCCCC               TTTCTTCCTTGAAAG  95 134
        pyrF 1619158 .. 1619177 +  -4.3  -3.28712   AAATGATAACGGCCT            GCTTATG GCTGTG CATGAGC             TTGTCAAAGGGAGGG  50 68
 C1O47_07285 NONE
 C1O47_07290 1621775 .. 1621785 +  -8.2  -2.62735   TTTCCTGAGGAGGAA                 CGGC GTT GCCG                 TGCTGTAAGGGGTAT  58 75
 C1O47_07310 NONE
 C1O47_07315 1627277 .. 1627316 +   -13  -4.56775   TTGCCACGTATTTTC  CTTGAACCCCGTTGTGTC GTCC GGCATAATGGGGTTCAAC   TTTTTAAAAGGAAAT 100 45
 C1O47_07320 1627722 .. 1627741 +  -7.8  -5.42198   CGCCAGTTTTTTTAA            GCCCCG TGGGATGT CGGGGC             TTTTATTTTTTGACA 100 36
 C1O47_07340 NONE
 C1O47_07345 1631762 .. 1631785 + -14.6   -5.4505   TTCTTTCTCGGAAAA          GGAGCGCTCC CTGT GGAGTGCTCC           TTTTTTGTTGCAGAA 100 75
 C1O47_07360 NONE
 C1O47_07365 1635337 .. 1635349 +  -3.4  -3.14792   GTTTCCAATTCCCAG                GCTT CATGA AAGC                GTTCTTTTCCATTAA  44 17
 C1O47_07370 NONE
 C1O47_07375 NONE
 C1O47_07380 NONE
 C1O47_07385 1640898 .. 1640935 +  -6.3  -3.32997   GCGGCTATTCTGATG   CCGGAGGATTTGGCCATG CCG TAAGGC-GAATGCTCCGG   TTCCGTTTCTGGAAG  55 2
 C1O47_07435 1659703 .. 1659732 + -14.9  -5.14965   TTGTTTGGGGTAAGG       CAGGGGCCTCCGC GGGT GCGGAGGCCCCCA        TTTTTTGATAGGCCT 100 64
 C1O47_07470 1666492 .. 1666502 +  -2.4  -3.05844   AGAAGGCCGGGAATC                 CCGG GTT CAGG                 TATTCCGGTGACGGC  42 114
 C1O47_07475 1668056 .. 1668066 +  -5.4  -4.08945   TATGGCTGATATTGC                 GTTC AAG GAAC                 TTTTGAAGAAGTAGT  63 1
 C1O47_07480 1669647 .. 1669679 + -17.1  -5.79588   GAGCCTCCTGTTTAT      CCGCGGAAGGGCATT ATT GATGTTCTTCCGCGG      TTTTTTTCCTTTTGC 100 41
 C1O47_07540 1680662 .. 1680687 + -11.1  -4.58395   TTCCGAATCAGAAGA         GCCGTTCCGCA TTTT TGGGGGACGGC          TTTTTGAAAAATGCA  95 188
 C1O47_07590 1691620 .. 1691639 + -10.7  -3.28712   CCTGATTCTCCTTCT            GGCCGGA AAGCAA TCCGGCC             TTCTGCCGGGAGAGG  73 41
 C1O47_07595 1692599 .. 1692622 + -18.2  -5.71295   AATAGTTCAAGCCAG          GGCCGTTCCC GGGA GGGAACGGCC           TTTTTGTTTTTGTCT 100 47
 C1O47_07605 1693586 .. 1693603 +  -4.1  -3.10701   GTCTACAGGGGCCGA             TTTAGGG GCAT CCCTGGA              TTCCCTGCGTATTTA  46 120
 C1O47_07610 1701985 .. 1702019 + -24.5  -3.14132   TTCCTCCGGGTCCTC     CAGAGCCGTTCCGGA ACAAC TCCGGAACGGCTCTG     TTGCTCAAAGAAAAC 100 78
        gyrB NONE
 C1O47_07620 1707467 .. 1707501 + -12.8  -3.16323   AGAATAATATTCAGG     TTTTCCTGCTCCGGCG TCA TGCCGGAGCAGGGGGC     TTCATGGGCCGTTTT  79 34
 C1O47_07625 NONE
 C1O47_07630 1709512 .. 1709534 + -11.2  -3.27525   AATTTTTCCGTTTCC           TGCCCGGCTG GGC CGGCTGGGCG           TTCGGTTTCAGCCGG  76 112
 C1O47_07635 NONE
 C1O47_07640 NONE
 C1O47_07645 1716247 .. 1716263 +  -4.3  -3.93695   GTTAATGGAGCCGGA              GAGGCAG CCT TTGCCCC              TTTGTAAATCCTGCC  59 2
 C1O47_07650 1716927 .. 1716959 + -13.3  -3.71907   GGTAGCAAGATTTAC      CCCGGAGGCGTCCGC GGC GAGAACGGCTCCGGG      TGTTTATGCTTTTTA  90 219
        pstB 1733956 .. 1733969 +  -3.7  -2.60813   TTCCAAAGGAGGAGC               CGGGC GTGT GCCCC                ATGTTTCCGGCACTG  43 74
 C1O47_07730 1734773 .. 1734789 +  -5.8  -4.36592   GGAAGAACGGCGGGG              GGCGTT GTTGA AGCGCC              TGTTTTTTGTTCGGA  71 58
 C1O47_07750 1739574 .. 1739613 +  -5.8  -5.60993   CTCCTTGTCCTGCTG  CCTGTTTTT-CCGGCTTTT TCC AAATGCCGGCAGGAAAAGG  TTTTTTTGTGGAAGG 100 150
 C1O47_07755 NONE
 C1O47_07760 NONE
 C1O47_07765 1742041 .. 1742053 +  -3.3  -4.00476   CCAGTTTTTCCCAGT                AGCAG CGG CTGCC                TTTCTGGTAAATTTC  56 236
 C1O47_07785 NONE
 C1O47_07790 1745053 .. 1745067 +  -4.2   -4.3208   CTTGATTTGGGCGGT               TTCACC GAT GGTGAC               TTTTCCCTTGTCGGA  65 205
 C1O47_07820 1750264 .. 1750275 +  -2.2  -3.55071   GCGCGGAAAGGACTG                CGCGG ATG CC-CG                TTTCCCGCAGTCTGC  47 41
 C1O47_07825 NONE
 C1O47_07830 1752607 .. 1752625 +  -8.8  -3.06183   GGCAGTGGTACAATC             CGCGGTAG GCG CTGCTGCG             TTCAATGGGGATGAC  63 483
 C1O47_07860 1758185 .. 1758199 + -11.4  -2.65894   CGAGGAAAGGAATAA               TCCCCG TGA CGGGGA               ATTCTCCGTCTTGTC  70 26
 C1O47_07865 1758565 .. 1758576 +  -4.4  -4.07687   GAGGATCCCTGGCAC                GGAA GGAT TTCC                 TTTTGGAGGAGAAAT  61 176
 C1O47_07870 1759646 .. 1759672 + -13.8  -5.72254   CCTGTTTCCATTCAG         CTCCCTTCCG CGGTTAA CGGAAGGGAG         TTTTTTATTATTTCC 100 56
 C1O47_07900 NONE
        pssA 1769010 .. 1769040 +  -7.4  -5.00616   GGCGGTGTTTCCGCG       GCCCGGTTCCGGGA ATG TCCCTGGGTCCGGC       TTTTTTAAGGGCGGG  87 110
        folP NONE
 C1O47_07920 1773327 .. 1773343 +  -4.4  -4.10429   CGGTGGCCGGATTGG              CGGGAA AAGGC TTTCCG              TTTTGAAGGATGGTT  61 138
        ispG NONE
 C1O47_07930 1776042 .. 1776053 +  -4.4   -5.4833   GGAAACCGGATATCC                CTGA ACCG TCAG                 TTTTTTCTTAAATCA  87 241
 C1O47_07935 1777334 .. 1777350 +  -3.5  -5.27938   AGGGAATGCCCTGTT              CCGGCGG TTC CGGGCGG              TTTTTGTTTGGAGCT  82 46
 C1O47_07945 NONE
 C1O47_07950 1781349 .. 1781360 +  -4.4  -4.18197   GGGAAAGAATGAAGG                TTCC CAAA GGAA                 TTTTCACTGAACCCT  63 238
 C1O47_07955 1781870 .. 1781897 +  -4.8  -2.50113   TTTTTAGGAAGATCG        GCGATGAATGGC GGGC GCTCTTCATGGC         GTTCATGCCGTGATA  44 51
 C1O47_07960 1782479 .. 1782492 +  -2.3  -3.71848   GGTTGAGCGTTTTGC               CGGAG GGAG CTGCG                TTGTTCCTGAAAAGG  50 254
 C1O47_07965 NONE
 C1O47_07970 1783976 .. 1783986 +  -2.4  -5.19251   TCTGCGGAGAGTTCC                 CCGC TGA GCAG                 TTTTTGTTCGTCTTC  79 417
 C1O47_07985 1787155 .. 1787167 +  -4.1  -2.87294   ACGGATGAGTTTTTT                TTCTC TTT GGGAA                TCTAATATCAGTATT  45 114
        hypB NONE
        hypF NONE
        hypC NONE
 C1O47_08005 NONE
        hypE 1793103 .. 1793119 +  -6.5  -5.40072   ATTTTCTGGTGTATT              CATCCGC CAG GCGCATG              TTTTTTTCCACGCCG  91 510
 C1O47_08030 1799005 .. 1799047 + -15.7   -3.0792   ATAAATAAGCAACCC TCTTCCCGCCGGAGTGGGAA GCAA TTCCCCCTCCGGC-GGAACA TTACATCCCGTATTA  93 33
 C1O47_08035 NONE
        groL 1801122 .. 1801146 + -18.6   -5.2422   GGCAATCGGCTTCAA          GGCTCCCCGG TTTTT CCGGGGAGCC          TTTTTTAATATGCTT 100 66
 C1O47_08045 1801740 .. 1801769 + -20.1  -5.00616   CATTTAATGAAAGCG       GGAGGAGGGCGGA TGAA TCCGCTCTCCTCC        TTTTTTGAGGACCGG 100 56
 C1O47_08050 1804130 .. 1804165 + -20.4  -3.02263   TCTCCCTGTAATTCA    CGTCCGTGCCGGAAGC ATTC GCCGCCGGCACGGACG     TATTGCCCGGACTGT 100 43
 C1O47_08060 NONE
 C1O47_08065 NONE
 C1O47_08070 1806635 .. 1806672 + -17.3   -5.1244   CCATTAATGCCTTTA   CTCCTCTAATTGCGAAT TTTC ATTCACAATTAGAGGAG    TTTTTATCTTACTGC 100 52
 C1O47_08075 NONE
 C1O47_08080 1809541 .. 1809565 + -13.6   -5.4505   GGCATTTTTCCCATA          CCCGGCTTTC CGCAA GGAAGCCGGG          TTTTTTATTGGGCCG 100 41
 C1O47_08085 1810650 .. 1810666 +  -2.1  -4.74103   AAAAGATGACGGAAG              CGGTTCC GGA GGATGCG              TTTTTAGCTTGCGCG  65 32
 C1O47_08090 1811354 .. 1811383 + -13.7  -3.34715   TTTTGATTTTCATGA       GGGAACATGTCCGC TTG GCGGA-GTGTTCCC       TGTTTGCGGAAGCTG  84 77
         gap 1812666 .. 1812687 + -15.9   -5.5604   GGCGGGGATTTATCC           GGGAGGGCA GAAA TGCCCTCCC            TTTTTTATTCATTGA 100 136
         pgk 1813990 .. 1814017 +   -17  -5.37593   AATGGGCTTTTTTAT        TCCCTGCGCCCG TTTT CGGGTGCGGGGA         TTTTTTGATTTGCCG 100 81
 C1O47_08105 1815189 .. 1815228 + -15.8  -3.53012   TTTTTCGAGACGGGC  GGTGTAGCGGCGGATGAAC ATG GTTT-TCCGCCGCTCCGCC  TTTGAAGAGGGAAGA 100 53
 C1O47_08115 1816876 .. 1816903 + -15.5  -4.40804   CTAACATTTTTTATC        CTGGCCGCGGC GTGAAA GCCGCGGCCTG         TTTTGTGCCATCATG 100 42
 C1O47_08120 1817749 .. 1817763 +  -2.1  -3.87994   ACGATTTTTCAAAAT              TGACCC TTAC GGG-CA               TTTATGGGCGTAACT  53 131
 C1O47_08125 1818658 .. 1818678 +  -4.7  -4.73108   TTTCCACCATGGAGA            TGTTGGCAT GGG ATGCCAGGA            TTTTGATTTTGTGGG  74 302
 C1O47_08150 1828021 .. 1828031 +  -2.4  -3.68658   CAGGTCTCCAGAAGG                 GCGG AAG CCGA                 ATTTTTTAATCAGGT  48 480
 C1O47_08160 1829736 .. 1829752 +  -2.2  -4.15044   CCACCTGTTGTATCC             GCAGGGG GTTG CTCC-GC              TTTATTGACCGGGCG  57 1
 C1O47_08175 1832112 .. 1832124 +  -3.3  -2.75064   GAGCGGTATTCTGGC                GCAGG CTT CCTCC                TGATTGGCTGGGCGG  41 10
 C1O47_08180 NONE
 C1O47_08185 1832456 .. 1832479 +    -6  -5.42198   CCGACCATTTTAAAG          CCTGTGGATC AAAT GATTTACGGG           TTTTGTTTTTTGAGC  95 34
 C1O47_08195 1833954 .. 1833965 +  -7.2  -3.08344   TATCTTTTGATTGAC                CGCG TGCG CGCG                 TATGTATACTTTCCG  59 54
 C1O47_08200 1834997 .. 1835027 + -17.6   -4.2349   CGAATACATGACAAA       GGCCTCCGGTGCGT TGA ATGTGCCGGAGGCC       TTTTACATATGGGGA 100 58
 C1O47_08210 1837589 .. 1837616 + -19.2  -5.39721   TGATTTGCTCTTGCG        CCGGGTTTCCCG TTTT CGGGAAGCCCGG         TTTTTTATGTCCTGA 100 44
 C1O47_08215 NONE
 C1O47_08220 NONE
 C1O47_08225 1844299 .. 1844311 +  -4.1  -4.58283   TGCGAGGTTTTTCCC                GGAAG CTT TTTCC                TTTTTCAGAGGATTC  69 64
 C1O47_08235 1845547 .. 1845564 +  -9.1  -3.12142   AATGCACCGGACCAG             CGCCAGGG GGC CCC-GGCG             TGTATTCCATGTCCG  63 320
 C1O47_08250 1848311 .. 1848334 + -16.8  -3.83026   GCCGCCGTGTTCAAA          GCCTTTGCCG GAAA CGGCAAAGGC           TTTGCTGTAGGAAGG 100 69
 C1O47_08255 NONE
 C1O47_08260 1849590 .. 1849613 +  -5.3  -4.13767   GGATTCATGACTAGG         GC-GCGCA-CG ATGG CGATGCGCTGC          TTTTGGCCTCCGGAA  64 429
 C1O47_08280 1853245 .. 1853261 +  -3.7  -3.10612   AAGACACTTTCAAGA              CGATGAA TGA TTCATCC              TATATTCCGGTTGAC  46 57
 C1O47_08285 NONE
 C1O47_08290 1855197 .. 1855210 +  -3.7  -5.08601   AAGCCAGATGGCGCA               GGGCG CTGG CGGCC                TTTTTGTTGCCGTGC  79 210
 C1O47_08320 1862986 .. 1862999 +  -5.2  -2.74144   AAACGGCCTGCCCTG               CCGC AGGTAC GCGG                ATTTCGCCATGCAGG  47 378
        hisA NONE
 C1O47_08335 1864343 .. 1864360 +  -2.5  -3.59305   CCGGAGCTTAGGAAA             GCCGGGC GGAA GGCAGGC              ATTTTCTTTATGCGT  47 30
        grpE NONE
        dnaJ NONE
 C1O47_08350 NONE
 C1O47_08355 1868291 .. 1868302 +  -7.2  -4.36914   CTTCCACCAGGATGG                CGGG CATG CCCG                 TTTTCTCAAACCGGC  77 334
 C1O47_08385 1874899 .. 1874916 +  -7.7  -3.20723   TTCCGGACTGAACTG             CCGG-AGC CGT GCTACCGG             TTCAGTTCATCCCAC  61 30
 C1O47_08400 NONE
 C1O47_08405 1878379 .. 1878406 +   -17  -5.93809   TTCTTCTTTTACCGG        GTCCGGAGCCGT TTTT GCGGCTCCGGGC         TTTTTTTTGTCGCCA 100 56
 C1O47_08410 1879811 .. 1879828 +  -2.5  -3.51411   TGATTCCATCCTGCC             CGTCAGG CTTT CCGGCCG              TTGATTTCGCGCAAT  47 120
 C1O47_08415 NONE
 C1O47_08420 1881543 .. 1881568 +  -5.4  -4.72272   GTACATAAGAAAAAA         GAACCGC-CCC TTCAC GGGAGCAGTTC         TTTTTGGTGAAAAGC  73 365
 C1O47_08445 NONE
 C1O47_08450 1886384 .. 1886413 +  -9.3  -5.00616   GTTTTGATTGCCTTT       CAACCGTATCCTG GAAT CAGGATACGGTCA        TTTTTTGCGGAAGCA  93 84
 C1O47_08475 NONE
 C1O47_08480 NONE
 C1O47_08485 1893948 .. 1893972 +  -5.7  -3.67611   TCCGGGATGGAGGCT          CCGGTTCCGAG ACA TTTGGAATTGG          TTCTCTTCCCGTGCC  62 102
 C1O47_08495 1897304 .. 1897321 +  -3.3  -4.56597   CCGGGAAAGGCAGGG             GGCAGGC TGTG GCTTGCG              TTTTTCCAGCAGCCG  67 81
 C1O47_08525 1901428 .. 1901438 +  -4.6  -3.53012   TCCATATGCCAAACT                 GGGC CTT GCTC                 TTTACCCAGGCCAGG  52 383
 C1O47_08540 1904005 .. 1904016 +  -2.2   -2.8315   CCGGTTCCCGTTCCA                TTCC CCGC GGAG                 CTTTCGGATTATTCT  39 45
 C1O47_08545 1905123 .. 1905146 + -16.8  -3.84278   TCCTTTTCCTTTCAA          CCCGGTTTCC CTGT GGAAACCGGG           TTATTCATTGCCTTT 100 54
 C1O47_08550 1907750 .. 1907784 + -22.2  -4.15044   TGAGCCGTTAAATCT     CTGACCGGGGAAGGCG GAA TGCCTTCCCCGGTCTG     TTTCTTGGAAAGAGA 100 51
 C1O47_08575 NONE
 C1O47_08580 1913475 .. 1913506 +   -18  -5.45652   ACATCCTGTTAATAC      CCCGCTCCGGCCTT TTGT GAGGCCGGAGCGGA       TTTTTTATTGGCAAT 100 55
        fabD 1914541 .. 1914566 +   -14  -5.46657   ATAAAAGGGGGTAAG         CCGCCGGC-CC GTTGG GGAGCCGGCGG         TTTTTTGTTGGCGTG 100 50
 C1O47_08595 1915198 .. 1915219 + -11.6  -3.57144   GGTTTGACGGGGAGG           CCGTCGTC GCGGCA GACGACGG            TTTGAAAATAGGGCA  77 239
 C1O47_08610 NONE
 C1O47_08615 NONE
 C1O47_08620 NONE
 C1O47_08625 1922828 .. 1922851 +    -3  -3.31322   GTTCCGGAACAGGGG          GGGAG-GAGGC GTT GCCGCACTCGC          TTCTGGACGGTTCCG  46 45
 C1O47_08630 1924591 .. 1924608 +  -5.5  -4.07568   GCAGTCCCAGGGCGA             TGCCTCT GGGC AGCGGCA              TTTTGCGGGCGACCC  64 473
 C1O47_08645 1928052 .. 1928077 +    -4  -4.63218   GGCGGAAGCAGGGAT         TTCCG-CATGG CGATT CCTTGCCGGAA         TTTTGTTGGACAGGA  69 197
 C1O47_08655 NONE
 C1O47_08660 1929720 .. 1929738 +  -2.3  -3.48593   TACGCGCAATCTCGC             TTTCCGC CGTTA GCGGGCA             TTATCTGAAGACCTC  46 13
 C1O47_08665 1930859 .. 1930872 +  -5.2  -3.52689   GGGAAACCGGGGAGG               GCGG AATCGG CCGC                TGTTGCTTTTTGTCT  56 51
 C1O47_08670 1931648 .. 1931662 +  -2.8  -3.03811   GTACGGCATGGGCGT               CCGT CTCAATC ACGG               TAATTTCCCTTTTTC  44 8
 C1O47_08675 1932725 .. 1932735 +  -2.4  -5.46657   GTGAATTTTCTCGTT                 CCGG ACA CAGG                 TTTTTTCTTGGAGTA  80 80
 C1O47_08680 1935059 .. 1935087 + -21.1  -5.64274   TTCACGGAAAACGGA        GGGAGTCCCGCTG TTC TAGCGGGACTCCC        TTTTTTTCTGGCTGA 100 54
 C1O47_08685 NONE
 C1O47_08690 1937692 .. 1937721 + -11.6  -6.09196   ACCATTTTTCAAGAA       CTGCTTTGATTC CTCCGA GAGTCAAAGCAG        TTTTTTTATTTTCAA 100 498
 C1O47_08695 NONE
        trpD NONE
 C1O47_08705 NONE
 C1O47_08710 NONE
        trpB NONE
 C1O47_08720 1944156 .. 1944183 +   -20  -5.58522   GCGGCTTTTAAGGAT        GGGCCTGCACAA CTTA TTGTGCAGGCCC         TTTTTATTTTATCTG 100 56
 C1O47_08725 NONE
 C1O47_08730 1953991 .. 1954016 + -20.5   -5.1675   TCAGCCAATTGGAAA         GCCGCTGCGGA ATCA TCCGCAGCGGC          TTTTTTCATGAATGG 100 52
 C1O47_08750 1958505 .. 1958531 +  -5.7  -3.76759   AAGAGGGACTCTCAT         CCGGAAGAGGG GGATG CCTGCGTCCGG         TTTGCTGCGGTTGGT  62 208
 C1O47_08775 NONE
 C1O47_08780 1967590 .. 1967600 +  -2.4   -4.3534   CCATGAGGGGAGTCT                 CTCC GGC GGCG                 TTTTGATGGTTGACG  60 385
 C1O47_08790 1970157 .. 1970176 +  -5.7  -3.97947   AGGGGATTCCTGTAC            GCTTTCC GTGAGG GGAGAGC             TTTCTGATGGCTGGG  66 280
 C1O47_08795 1970924 .. 1970949 + -15.5  -5.36441   GTTCCCTTTTACCAA         CGCCGTGTTCC ATGA GGAATACGGCG          TTTTTTATGTGAAAG 100 49
 C1O47_08800 1972647 .. 1972659 +  -3.4  -3.71255   TTGTCTGCCGGTAAA                GGAT GGAAA ATCC                TTGTTAGCTGATTCT  52 391
 C1O47_08815 1975742 .. 1975757 +  -4.8  -3.99324   CTTTGTTCCAGTCTT              TTCTTA TATA TAAGAA               TTTCTCATGATAAGC  61 276
        rpmI 1976230 .. 1976247 +  -6.9  -3.53811   CTAAACCGCGGAAAC             GCTCGAC TAAT GCCGAGC              TTTCCCCCCGCTGAA  62 37
 C1O47_08825 1976792 .. 1976821 + -20.9   -4.3467   GTAAACGTTAACCGA       CAGCCTCCGGAAA TAAT TTTCCGGAGGCTG        TTTTCATGTCCGGAT 100 66
        rseP 1978801 .. 1978826 +  -5.4  -3.73995   GCCCCGGTATTCAAG         GCCGTCGCGGA TTAGT TGCG-GACGGC         GTTTTTTATCCCGGC  59 11
 C1O47_08835 1980217 .. 1980238 +  -4.3  -4.31835   GAAAGCATCCGGGTG           GCTGTTCCG GAAC CGTGACGGC            TTTATTCTGGCCGTT  66 8
 C1O47_08840 1981305 .. 1981329 + -10.7  -5.95539   CCTTTGTTATCAACG          CCGCTCCGT AATTCAC GCGGAGCGG          TTTTTTTATTTGGCG 100 54
 C1O47_08870 1997327 .. 1997342 +  -4.6  -2.84687   AACGCAGGGATTTTG              CCTCTC TTGT GCGAGG               TATCGTCGTGGTTGA  45 76
 C1O47_08875 1998257 .. 1998271 + -11.4  -3.23532   AGCTTCCGCGTTTGC               GCCGGA ATT TCCGGC               TGTCTTCGTTTAAAT  76 121
        tsaB NONE
 C1O47_08900 2002399 .. 2002444 + -17.1  -2.56761   GCGGTGACAGGTTTT AAT-CAGGAAAGGCGCCGGA TATTACT TCCGGCGCCTTTCCTGCATC TGCCTTCCGCTTTTC  95 34
 C1O47_08905 2002832 .. 2002846 +  -5.6  -3.14132   GACTCGTCAAATGCC               GGTCTG GCG CAGTCC               TTCATAAAGGACGAC  51 209
 C1O47_08915 2003954 .. 2003967 +  -9.5  -4.17048   TGCGGGCATGCCTGG               CCGGC TGTG GCCGG                TTCTTTTCCCGGGCG  83 48
 C1O47_08935 2006414 .. 2006428 +  -4.3  -3.86346   GCGGAACCGGTGCGA               TTCCT ATAAG AGGAA               TTTGTGACGAAGTCC  59 4
 C1O47_08940 2007258 .. 2007297 +  -2.8  -3.65351   GGAATGGCCGTAAAT  GCGCTTGATGGCGGCAT CCTCTCC GTGCTGCT-TCTGGCGC  TTTAACTCAGCGTCC  50 289
 C1O47_09025 2027139 .. 2027150 +  -2.2  -4.07568   GTCCTTATGTAATTG                TGTC TTCC GGCA                 TTTTCCCAAAAGGAA  55 70
        sufT NONE
 C1O47_09045 2032011 .. 2032023 +  -4.8  -3.49102   TGTTGCCTGTCTGCC                GGGA AATAC TCCC                TTATATCCGCCCTGT  52 132
 C1O47_09110 2048608 .. 2048621 +  -2.3    -5.055   ATCCGCCAGCGGTCC               GTGTC CTTG GTCAC                TTTTTTGGGGATTAC  75 507
 C1O47_09125 2051394 .. 2051419 + -13.3  -2.73622   TTTATTTTCTTCACC         TGCTTCGGCCA TTAA TGGCCGGAGCG          TGCTATCATTCTTAT  79 11
 C1O47_09130 NONE
 C1O47_09135 2052644 .. 2052660 +  -7.3  -4.84017   TCCGCAGCCTATGTC              CGTCATG CTC CATGATG              TTTTTCTGCGGGATT  83 411
 C1O47_09145 2053320 .. 2053330 +  -5.4  -3.12892   TGTAAGAAGAGGAAG                 GAAC CTT GTTC                 TATTCCAATCTTTTT  51 36
 C1O47_09150 NONE
 C1O47_09155 2056657 .. 2056683 +   -13  -4.77036   CACGGATAGAAAAAA         GGGCACGTTTCC TTC GAAAGCGTGCCC         TTTTTGATACTACGG 100 51
 C1O47_09165 2060028 .. 2060044 + -10.9   -2.7965   ATTCCTCGATAAACT              CCATCAG TTC CTGATGG              TCGTCTTCCGTTTCT  66 481
        dnaG 2064492 .. 2064511 +  -7.2  -2.83641   GTACAATGTAGTGCC            TCGATACC TCCG GGTATTGA             TATAATGGTGAATTG  56 30
        rpoD 2066624 .. 2066681 +  -7.1  -2.55437   CCTGACCGGATTTGC GCCGCATGCCGT-GCTACGCTTCGT GGTCATGAAG ACTT-GCGTAGCTGCGGTATGCGGC ATGTTCATGTTACTG  52 36
 C1O47_09190 2067408 .. 2067427 +  -6.6   -4.2123   AAGAATTTTACATAT            CAAATTTT TGTA AAAATTTG             TTTGTTAGCTGAGTG  71 41
 C1O47_09195 2068108 .. 2068122 +  -2.8  -3.03338   ACGAAGTAATATCTG               GAGG ATGAATG CCTC               TCTTAAAACGCTTCT  44 98
 C1O47_09200 2068744 .. 2068759 +  -4.6  -4.25104   GCCGCGCGTATCGGG              GGCCGT AAAT ACGGAC               TTTTGATGAAAAGGC  63 142
 C1O47_09220 NONE
        hrpB NONE
 C1O47_09230 2079530 .. 2079557 + -17.8  -5.47159   AGGTAGTTAGTTGGA        GCGGCTACGGGA GAAA TTCCGTAGCCGC         TTTTTTGTCTTCCCG 100 181
 C1O47_09235 NONE
 C1O47_09240 2082571 .. 2082581 +    -4  -3.94634   TTAGCATTATAAGCG                 TCAA AAT TTGA                 TTATTTCAACTCATG  57 29
 C1O47_09245 2084357 .. 2084370 +  -5.3  -3.05384   GCTGGAACTGTCTGC               CGTTT AAAG AAACG                TTCCCTCCGGAGGGA  51 19
 C1O47_09250 NONE
 C1O47_09255 NONE
 C1O47_09260 NONE
 C1O47_09265 2090262 .. 2090272 +  -2.4  -2.81584   GAGCCTGACGAAAAT                 GCCG TGA CGTC                 CGTTTTTCTTGTCAA  39 33
 C1O47_09270 2091137 .. 2091167 + -21.3  -4.15841   CTTTCTTCCTGTTCA       CAAGCCGTACCGG TTTTT CCGGTACGGCTTG       TTTATGGTTTCATGG 100 58
 C1O47_09290 2095632 .. 2095642 +  -8.2  -5.08824   GTTCTCTTTCAACGG                 CGGC ACG GCCG                 TTTTTTCCGTAACAC  93 77
 C1O47_09305 2097033 .. 2097046 +  -8.1   -2.8742   GCGTACAGGTCCGGC               GGCCA TCCC TGGCC                TGATTCCTCTTTCCG  60 9
        ilvB 2099086 .. 2099113 + -19.2  -3.05384   CTATTGAGCCTTAAA        CAGGAGCCGTCC GTAA GGGCGGCTCCTG         TTGCATGGCGGCGCA 100 59
 C1O47_09315 NONE
 C1O47_09320 2104406 .. 2104428 +  -7.6  -5.14965   CGGTTTCAAAGGGTG           TGGCCGGGTT GAG AGCCAGGCCG           TTTTTTACTCCGGCT  88 454
 C1O47_09335 2109299 .. 2109320 +  -3.7    -4.652   CGGGCGGACCGGGTC           GAGGCTGGGG TGC CCTCA-CTTC           TTTTTCCAGTAGTTT  68 102
        nspC NONE
 C1O47_09350 2113712 .. 2113723 +  -3.6  -4.67942   AGGGAGCGTCTGTCC                CGTG CCGG CGCG                 TTTTCCTTTGTTGCG  68 67
 C1O47_09360 NONE
 C1O47_09365 2121240 .. 2121267 +  -7.6  -3.94877   TGGAGAAGTTTTCCA        GCCGTGAGCCTT TTCC GGGGTGCACGGC         TTGTTGTTACGGGCT  69 74
 C1O47_09370 2123969 .. 2123985 +  -4.3  -3.41988   TCCTGTTACTGCGCG              TACCGGA GTT TCCGGCG              TCTTCTTCCGTCCGC  52 73
 C1O47_09380 2127524 .. 2127534 +  -6.8  -3.15544   TGGTAACGGCGCTTC                 TCCC TCC GGGA                 TTGATCAAAATGGCG  54 438
 C1O47_09390 NONE
 C1O47_09395 2128729 .. 2128739 +  -3.2  -4.18762   TCGCGAAGCGGGGCA                 GGGA ATA TTCC                 TTTTGCATGGCCGTT  58 44
        hxsB NONE
        hxsC 2134505 .. 2134530 + -14.9  -5.18995   AAGAAATAGTACCTA         GGCATTTTCCT AATT AGGAAAATGCC          TTTTTGTGTTATATT 100 339
 C1O47_09430 NONE
 C1O47_09435 2137152 .. 2137176 + -11.4  -4.34737   ACTGGTAATAGAAAA          CCCTGGGAGC GTTTA GCTACCAGGG          TTTATTGATTGGTAC  91 256
 C1O47_09485 2147062 .. 2147079 +  -2.7  -4.26079   GTGAACGGTTCCGCG             CGGAAGA TGGG TTTTCTG              TTTTCCGTAGTTTCC  59 106
 C1O47_09490 2149260 .. 2149287 +  -4.9  -3.46141   ATAAAACCGGGTCAC        CGTCTCCTTTT TAAATT GAAAGGAGGTG         ATTTTTCATCATAAT  52 40
 C1O47_09495 2151711 .. 2151746 + -16.9  -3.05596   AATTGTTGAACTTTT    CAGGGCCGCTTCCTC CAGGAT GAGGGGGCGGCCTTG     TTGCGTCCGGACATC 100 50
 C1O47_09505 2154129 .. 2154142 +  -2.4  -3.01802   ATTCCTTCTTTACCC               GCAT GGGGGG ATGC                CTTTATAGTAATTTC  41 143
        lpdA 2155559 .. 2155595 +   -16  -3.63228   CACATGTAACGGTTT    TCAATGGAAGGGCCCC CATCC GGGGCTCTTCCATTCA    TTCCTTTGTCATGCA 100 32
 C1O47_09565 2169844 .. 2169854 +  -5.4   -3.1811   AAATACTCCATTACA                 GATG ACG CATC                 ATTTGTTATCGGCAC  50 134
 C1O47_09585 NONE
 C1O47_09590 2173371 .. 2173389 +  -9.5  -5.50723   ATTATGTAAATTAAA             GGCTCGC TGTTT GCGGGCC             TTTTTGTTTTGCTGC 100 60
 C1O47_09595 2174680 .. 2174698 +  -3.8  -4.26076   TTGGAAAAAACACTC             TGGAACAG GTT CTGTTGCG             TTTTGATGCGGCTGA  61 390
 C1O47_09605 NONE
 C1O47_09610 2177374 .. 2177409 +   -12  -4.15565   GTTCTATAAAAACAA    CAACCGCAAGCCTT GTTTTTCA AAGACTTGCGGTTG     TTTTGAAATGGTGGA  95 128
 C1O47_09625 2180541 .. 2180569 +  -4.6  -3.10343   TCAAATGAATGGCTG       TCTATCCCGATCC AGTA GGGTCGAGA-AGA        TTGCCTGATCAATAT  48 267
 C1O47_09630 2180769 .. 2180795 +  -7.3  -5.27335   GCCTTTCTTTTTTAA         GAGTCTGCACT TTAAC GGTGTAGGCTC         TTTTTCTTTGCAAAC 100 43
 C1O47_09635 2182279 .. 2182307 +  -9.5   -2.7782   GCGGCTCCCATCTGA        GCCGGTGTCTTGG CAA CCACAATACCGGC        GTTCTTCAAGGCTTC  63 270
        hisD 2186009 .. 2186042 + -11.9   -2.8372   TTGCGAGATTTGTCG     GGATGGAAC-GCTCAT CGG ATGGGCGGTTTCATCC     ATTTGCTCGGAAATC  74 214
 C1O47_09660 NONE
 C1O47_09665 NONE
 C1O47_09670 2188876 .. 2188899 +  -3.8  -4.78981   AGGTAGGATGCGAGG          GGCTTCGTAA GACG TTGCGAGGCG           TTTATTTTGCTTGAT  72 35
 C1O47_09675 2190875 .. 2190887 +  -4.8  -3.29461   ATATTCTCAAGCAGA                GCTG AAAAA CAGC                TTCTGCAGAACCTTC  50 364
 C1O47_09680 2191456 .. 2191477 +  -8.1  -4.36914   CACCTGGTTTGTCTG           CC-GGATAAG CTG CTTATCCTGG           TTTTCTACCAGGGCA  79 338
 C1O47_09695 2195404 .. 2195424 +  -3.9  -4.11033   TGCTCAGTAAACGGG            ACGTATCAG CTA CTGCTACGA            TTTCTGGTCTTTGCT  59 31
 C1O47_09700 NONE
 C1O47_09705 2201419 .. 2201448 + -23.7  -2.78384   CCTCCTGACCCTCCA       GGGCCGTTCCGGA CAAC TCCGGAACGGCCC        TCTGCTGCCCGAAAA 100 85
 C1O47_09745 NONE
 C1O47_09750 NONE
 C1O47_09755 2212183 .. 2212212 + -11.5   -5.4505   ATACGTCTTAACGAA       CCTTCCTCCTC-TG CAA CATGAGGTGGAAGG       TTTTTTATTAACGAC 100 60
 C1O47_09760 NONE
 C1O47_09765 NONE
 C1O47_09770 2217903 .. 2217921 +  -9.6  -2.80816   ATTGTATAATATCTG             GCGAAAGG AGG TCTTTCGC             TATGATAGATAAAGA  65 47
 C1O47_09775 2218740 .. 2218771 + -14.6  -3.68709   ATTGGTAAAAAGACG      GGCATACACTTCGG ATGA TTGAAGTGTATGCC       TTATGCTTTATATTG  93 33
        coaD 2224086 .. 2224114 + -10.1  -3.80881   GCTGTCCGGTGGAGA        GGGGGCAGGGGCG GAA CGCCTGCGCCTCC        TTCTGTCTTTCTGCT  77 71
 C1O47_09825 2228187 .. 2228236 +   -18  -2.71712   GTTTACCGTTTTTAA GCGG-ATGC-TCCGCGGCCCTTTC ACCG GGAAGGGCCGCGGAAGCGTTCCCC CTTTCCGGGGGCGCA 100 26
 C1O47_09830 2229095 .. 2229111 +  -2.3  -3.72363   TGTTACCATTTTTCC              GCATT TAATAAT AATGC              TTTGCCGTTTCCATG  50 238
 C1O47_09835 NONE
 C1O47_09840 2231864 .. 2231883 +  -9.4   -4.8143   TGACGGCATCTGTTC            CATCAATG AGGC CATTGATG             TTTTTCACTTCTTCA  86 421
 C1O47_09855 2235756 .. 2235781 +  -6.8  -4.42238   TACGGGGCGCCTTCC         CGGGCGCG GGTAAAGGAG CGCGCCTG          TTTTCCTTCCCCTCC  74 13
 C1O47_09860 2238047 .. 2238094 +  -3.6  -4.17023   GAAGTTCCCGCAAGG GGGGCGCTCCTGA--ATCCGCCT TTTTC AGGCGGATGGTCAGGA-TGTCCG TTTTGAAGTCCTTGG  60 181
 C1O47_09900 2246326 .. 2246340 +  -2.8  -5.24129   GCGCCGCCTGGGGCA               GATCAA GCA TTGACC               TTTTTTATGGACCAG  80 13
 C1O47_09905 NONE
 C1O47_09910 2247903 .. 2247926 +  -2.2  -3.62096   CACCCCTCCGGCTAC          CTGGCCGCGG ATGT CCGCATACAG           TTTCCGGTAGTCGGA  48 146
 C1O47_09940 2254340 .. 2254353 +  -5.3  -2.87132   GGCTCTGGCCCCTGT               GGAAT CATA ATTCC                TCTCTCCGGCAGGCA  49 16
 C1O47_09945 NONE
 C1O47_09950 NONE
 C1O47_09955 2258314 .. 2258324 +  -4.6  -4.25283   TTTTACAAAAACGGG                 CGGT CTT GCCG                 TTTTCATGCCGAGAT  63 294
 C1O47_09965 NONE
 C1O47_09970 NONE
 C1O47_09975 NONE
 C1O47_09980 NONE
 C1O47_09985 2267173 .. 2267197 + -17.9  -5.27335   GAAAATATCTTCAGA          GCCGTCCCGTT TAC AGCGGGACGGC          TTTTTATTTCCCAGA 100 64
 C1O47_09995 2268885 .. 2268908 +  -3.1  -5.08824   GCGCCGGGCTGTTCA          TGTCC-GCAG CGTGT CTGCCGGGCG          TTTTTTGGGTAACGA  77 99
 C1O47_10060 NONE
 C1O47_10065 NONE
 C1O47_10070 NONE
 C1O47_10075 2284872 .. 2284897 +  -4.1  -4.28018   GTACAGCTTCTTCCG         TACCGGGAAAAT AAA ATGTT-CCGGTA         TTTTCCTGAGCTATT  64 92
 C1O47_10090 2287243 .. 2287272 +  -2.8  -4.76075   CCAGCCGGATATCTT       GTTTGCAGCG GGGCCTTGTG CGCTGCCAGC        TTTTGTTGATCTCCT  70 174
 C1O47_10100 2289410 .. 2289425 +  -3.2  -4.56597   AATCCGTCAGCCACT              GGCG GAGGGGGA CGCC               TTTTTCAGAGGCGGC  67 525
 C1O47_10115 2290999 .. 2291033 +  -4.9  -4.58395   TGAATGAAGAAAGAA     GAAGGCATGGTACGC GGCCG GCGTCCTTTCCCTTC     TTTTTCCGGAATCCG  68 148
 C1O47_10120 NONE
 C1O47_10125 NONE
 C1O47_10130 2294221 .. 2294236 +  -3.9  -3.20111   GCTGAAACCGCAGCA              GGCCG TTTAGT CGGTC               ATTTCCTTTTTAGTA  48 16
 C1O47_10135 NONE
 C1O47_10140 2296227 .. 2296239 +  -3.3  -2.64155   AGCATCTGAAATAAG                GAGGC CCC GCATC                TGAATTTGGGAAAGA  40 27
 C1O47_10145 2297402 .. 2297448 +  -2.3  -3.12892   TTTTGCCGGCGCGTT TCCTTCCGCTCCGGAAAAATGCC GCG GGACTGTTTGCGG--CGGAAGGA TGTTAAGCTATTTTT  42 41
 C1O47_10150 2298644 .. 2298663 +    -2  -3.62224   CAGTTTAGGAAGTGA            TGCGGGCA GGAT TGCCGGAA             TTGTTGAAAAAATAT  47 56
 C1O47_10155 NONE
 C1O47_10160 2299826 .. 2299836 +  -2.6  -3.69395   GAATCCTCTAAACAG                 TATT ACT AATA                 TTATTAAATAATACA  50 4
 C1O47_10165 2300695 .. 2300732 + -17.2    -3.737   TACTTCCATGTGAAA   CAATTACAGCGCAAGC TGTCGT GCTGGCGCTGTAATTG    TTTGATACAAAATTA 100 47
 C1O47_10170 2301528 .. 2301567 + -10.2   -3.0806   GCAAATAAGAACGCA GA-G-CGGCCGGGA-TTCC TCATT GGAAATCCCGGCCGACGTC TGTTGAGGATTTAAG  71 126
 C1O47_10180 2302754 .. 2302802 + -15.3  -4.29326   TGATTAAAGTCAGAA CGGCCTGAACCTCATTCCGGA AAAACAG TCCGGAATGGAGAACAGGCCG TTTCTTCAATTTGCG 100 18
 C1O47_10190 2304649 .. 2304661 +  -5.5  -4.57569   TCCCGTGCCGGGAAC                CAGGT AGT GCCTG                TTTTTCAGCCGGTAG  71 19
 C1O47_10200 2306668 .. 2306678 +  -2.4  -3.53761   TTGCAAAAAATGCTG                 CCGG AAC CCCG                 TTTCCCGGCAAGTTG  47 59
 C1O47_10205 NONE
 C1O47_10210 2309179 .. 2309196 +  -2.7  -4.08394   ATGAAAGCCGGGTAA             TTCTGTA TTGT TACAGTA              TTTTCCAGGGAATAT  56 46
 C1O47_10220 NONE
 C1O47_10225 NONE
 C1O47_10230 2315001 .. 2315012 +  -5.8   -3.6106   ATGTGGAATTATAGG                CGCA GGAG TGCG                 TTTACGGCTGTTCAG  59 27
 C1O47_10240 2315876 .. 2315899 +  -5.2  -5.73978   GTGGATTTCCTTATA          TCCGCGCATG GCGT CATGCACAGA           TTTTTTGTTTCTGGT 100 342
        nagB 2317763 .. 2317795 + -10.6  -5.26316   TTTTAGTAACGGAAA     TGCCGTCTTTCC-CG GTTT CGTGGGAAGGCGGCG      TTTTTTATGGGATGA 100 48
 C1O47_10260 2319354 .. 2319364 +  -3.2  -3.01712   GAAGCAGCCGATGTC                 TGGA AGC TCCG                 TATTGAGGGAGCGGA  42 455
 C1O47_10270 2321169 .. 2321189 +  -7.5  -2.71011   TCTGGAGGGCTTCTA            TGGAGACGG TTT CCGTATCCG            TAATTCCGGCACCGT  53 137
 C1O47_10280 2325281 .. 2325291 +    -4  -3.63367   CCTCAGGAAAAGGAG                 TTCT CGG AGAA                 ATTTTTCTTAAACCA  52 178
 C1O47_10310 2332942 .. 2332954 +  -9.1  -3.53012   CCCGTGATTTCCGTG                GAGCC GGC GGCTC                TTTCCGGAGGAAAAA  70 34
 C1O47_10315 2335201 .. 2335228 + -17.8  -5.95539   CGGTAACATGTTCAA        CGGGCCGTTTTC GTTG GAGAACGGCCCG         TTTTTTTGTTTCCGG 100 51
 C1O47_10325 2336545 .. 2336559 +  -4.2  -3.21934   GCGTCAGGGGAATAG               CCGG GGTGGTG CCGG               ATTTTGTGAGGAAGG  50 211
 C1O47_10335 2337162 .. 2337177 +  -6.2  -2.91383   TTTTTTTCTTGAAAA              CCTATA CCCC TATAGG               TATATAAATGCCCGT  52 94
 C1O47_10340 2339151 .. 2339163 +  -3.3  -4.59773   TGATTGCCGGGAGGG                AACGG AGT CCGTC                TTTTTGGCGCTCCGG  66 74
 C1O47_10350 2342298 .. 2342347 + -19.4  -5.79595   GAAGTAAAAATTGTT CCGAAAGGCATGGCCGTCTTCC GTCGAA GGGGGAGGGCCATGCCTTTCCG TTTTTTATTTTAAAC 100 34
 C1O47_10355 NONE
 C1O47_10360 2343729 .. 2343741 +  -4.7  -3.90112   ATTGTGCGATCTGCT                GCGGC ATT GCGGC                TTTCCTTGGCAGGCA  59 68
 C1O47_10365 2344880 .. 2344899 +   -15   -5.4833   ATGAAGTTGACGACA            GCTGCCCC GTGC GGGGCAGC             TTTTTTATTCAGTGA 100 74
         alr 2350314 .. 2350327 +  -5.9  -2.93549   GAGAGGGGACGTCTC               CCGGC AGAG GCTGG                TGCTTGTTGGCCCTG  51 329
 C1O47_10460 NONE
 C1O47_10465 NONE
 C1O47_10470 NONE
         def 2367979 .. 2367991 +  -6.2   -4.1466   ACGCTTTTTCCGGAT                CCGG CTGAA CCGG                TTTTCCGGATTCCCT  68 206
 C1O47_10490 2373527 .. 2373543 +  -7.9  -3.41051   CAGGGTGCCCAGGTT              CAGCACG CTG CGTGCCG              TTCTGGTGACGCTGC  61 440
 C1O47_10505 NONE
 C1O47_10510 NONE
 C1O47_10515 NONE
 C1O47_10520 NONE
 C1O47_10525 2380880 .. 2380895 +  -6.8   -3.9712   TTAAAGTAGGGAATT              CCTGCG TTTC CGTAGG               TTTCTAGTCCAATAC  69 300
 C1O47_10535 2383207 .. 2383231 +  -4.9  -4.11216   GTAATCCCCGTTCAG          ATTCAGCGTGG CTA CCACGTCGAAG          TTTTCCGGATGGAGC  61 460
 C1O47_10555 NONE
         tmk 2388038 .. 2388052 + -11.4  -3.53012   CCGCAATGACGAGCT               GCTGCG CCC CGCAGC               TTTCCGCAACCCCGG  75 403
        tatC NONE
 C1O47_10590 2395027 .. 2395044 +  -5.5  -4.09685   GCGAGGCGGTTCTCT             CCCGC AGCGGAAA GCGGG              TTTTGAACAATCCCG  63 85
 C1O47_10600 NONE
 C1O47_10605 2397446 .. 2397457 +  -5.8  -3.95073   TGATGCATTCCGCAT                CCGT CACT ACGG                 TTTCTCCCTGTGCGC  64 172
        rnpB 2399544 .. 2399559 +  -3.9   -3.4149   AACATCCGGGAAATT              GTCCC GTTCCG GGGGC               TCTTTGGGGTTGCAT  50 90
        murA NONE
 C1O47_10625 2401287 .. 2401313 + -16.6  -5.36441   GTACTTTTCTTTCAG         CACCCCCGTCCT TTG AGGACAGGGGTG         TTTTTTATGTCCCGG 100 64
 C1O47_10630 NONE
 C1O47_10635 2403526 .. 2403560 +  -9.3  -3.65542   TTTTTTCAGGAAAAA    GCGCTTCCTCC-AGAC GTTC GTCCCGGAAGAAGCGC     TCTTTTGAGGATAAG  73 159
 C1O47_10655 NONE
 C1O47_10660 2407533 .. 2407563 +   -22  -4.14392   GAGCAAAAAATCGCA       GAGCCGCTTTCCCG ATT TGGGAAAGCGGCTC       TTTTAGCAATTGAAA 100 51
 C1O47_10670 2409509 .. 2409526 +  -7.7  -4.07568   AACGTGACGGAATTC             CTGTTCC TAGT GGAACGG              TTTTAACAGACAACA  71 2
 C1O47_10675 2410571 .. 2410583 +  -2.7  -2.72461   TGGCATTACATATAT                TATGC GAA GTATA                GTTTAGGCAGCATTC  41 151
 C1O47_10680 NONE
 C1O47_10685 2412836 .. 2412846 +    -4  -4.68506   TTTTTAGTTTGCAGG                 GATA TTT TATC                 TTTTTGAGATTCCTT  68 68
 C1O47_10690 2414214 .. 2414269 +  -4.7   -4.4715   AAGATGCTGCCCGAA CGGCGGTTTCCCTGTTCATGGAATGC ACAGA GCATTCT-TGACGACCGGAGCCGCCG TTTTATACATTAAGG  68 54
 C1O47_10695 2415467 .. 2415500 +  -7.9  -5.27779   AAGCCGCCGGGGATC     CCATGCCGGGCTGGC TACC GCCCGCCCGGCAGAA      TTTTTTGCTGTTCCA 100 45
 C1O47_10705 2417405 .. 2417430 + -12.6  -3.64703   GCGGAACATGAAAAA         CCCCGGCCGTG CAAGC CACG-CCGGGG         TTTCCGTAAAAACAG  81 147
 C1O47_10720 NONE
 C1O47_10725 2420691 .. 2420717 +  -5.8  -4.25256   AACAAACCAGGACGG        CCCAGT-CGCC CAGCAT GGCGTACAGGG         TTATTTTCGTACAGC  69 117
 C1O47_10735 2422851 .. 2422882 + -15.2  -5.07652   TATATTATTTTAATC      GCCCGGGGCTGTTGG CAT TCAAC-GCTCCGGGC      TTTTATTTTCCCCCA 100 50
 C1O47_10740 2423317 .. 2423337 +  -6.2  -3.20028   AAAGACGCCGTTCAT           TCC-ATCCG CATA CGGATAGGA            TAATTTTATACTGCG  55 2
 C1O47_10745 2425438 .. 2425456 +  -6.7  -3.62046   AACATGGAACACTCC            CGG-CGGA GCTT TCCGTCCG             TTGTTCCAAAGGTCA  62 46
 C1O47_10820 2442497 .. 2442509 +  -6.3  -4.16146   AATTATGCAGAATAG                TCTTG TCG CAAGA                TTTTCAGAATATTTT  68 51
 C1O47_10845 2450412 .. 2450426 +  -4.2  -3.17688   TCCGCGCAGGAAAAG               CCGTTT CCG AATCGG               TTCCTGACGTCATTC  48 4
 C1O47_10850 NONE
 C1O47_10855 2453107 .. 2453120 +  -8.1  -5.23316   AGAATTCTCTGCATC               TGCGC TCAC GCGCA                TTTTTTCATGTGGTC 100 264
 C1O47_10860 NONE
 C1O47_10865 2455367 .. 2455396 + -20.1  -4.85599   AATGTTTCCTGCCGG       GCGGCCATTCCGT ATCT ACGGAGTGGCCGC        TTTTTATGCCCTCAA 100 51
 C1O47_10880 NONE
 C1O47_10885 NONE
 C1O47_10905 NONE
 C1O47_10910 2463480 .. 2463508 + -17.6  -4.49556   TCCGGCAAAGGAAAA        GGCCTTAAAGCG TTAAC CGCTTTAAGGCC        TTTATTTGGTGGAGC 100 208
 C1O47_10920 NONE
 C1O47_10925 2464867 .. 2464901 +  -9.9  -4.52703   TTTCCAATACGAAAA     AACCGGACCTCCCCC CCTAT GGGAGAAGTCCGGTC     TTTTCTCGTCGTTTA  90 148
 C1O47_10935 2466893 .. 2466921 +  -5.2  -2.52742   TATTCTGGATATTCA       CCGCCGCTTTCTG GACA CGGGACG-GGCGG        ATATTCTGGAAACCT  47 267
 C1O47_10945 NONE
 C1O47_10950 NONE
 C1O47_10955 2471896 .. 2471912 +  -6.5  -5.52096   GGGCTGCCAATCCAA              CCCTCCT TCA AGGAGGA              TTTTTTGTTGCCTTT 100 32
 C1O47_10960 NONE
 C1O47_10965 2474748 .. 2474773 + -13.3  -4.72272   AACTCTTTTTTCCGC         GCCGGTTCACG TTCC CGTGAACCGAC          TTTTTCATGCGGCAA 100 58
 C1O47_10975 2476774 .. 2476797 +  -8.8  -3.09004   ATGGAGTAGGCAATA          TTCGGGTGCC TCCG GGCTTCCGAA           TCCTTTTCCGGGTCG  63 342
 C1O47_10985 2482200 .. 2482242 + -22.9  -3.53224   ATTCCAGACCCGCTC TTT-CCGGGCGGAATCCGGC TGCT GCCGGGTTCCGCCCGGTGAA TTTACGGAAAAGGTA 100 55
 C1O47_10990 NONE
 C1O47_10995 NONE
 C1O47_11000 2485275 .. 2485300 + -19.1  -3.10017   CCCATCCGCTAAAAA         GCCCGTGGTTC CGAA GAACCACGGGC          TGTCTATTAACCCTT 100 336
 C1O47_11045 NONE
 C1O47_11050 NONE
 C1O47_11055 NONE
 C1O47_11060 NONE
 C1O47_11065 2505071 .. 2505084 +  -9.5  -4.08767   CTCCATTTCCTCCGC               GCGCC GTAC GGCGC                TTTTCACCGCCTGAA  80 115
 C1O47_11085 NONE
 C1O47_11090 2510088 .. 2510112 + -12.2  -3.05384   CCTTGCCGTTTTCGT         CGCGG-ACGCT GGAA AGCGTGCCGCG          TTCCATGCCGCGCAC  74 412
 C1O47_11100 2512351 .. 2512370 +  -2.8  -4.24204   TTTTTTCCGCAAACC            CCAGAAAG GCCT TTTTCAGG             TTTTCCCTGTCAATG  61 338
 C1O47_11125 2518531 .. 2518546 +  -2.4  -4.99861   GGAAATATAGTAAAT              GACGGG GCTT TCCGGC               TTTTTGTACTTCCTG  72 333
 C1O47_11135 2522145 .. 2522167 +  -9.8  -5.64873   GCCTCTTTTCCCCAA           GCCGCTCCCT AAC AAGGAGTGGC           TTTTTTCTTATTAAC 100 58
 C1O47_11155 2525953 .. 2525978 +  -2.3  -3.91164   AAAGACGGACAATCC         TCTGCGCCGGG AATG TCCGGCGCCCC          TCTTTTTCCAACCTT  53 68
         alr 2527127 .. 2527141 +  -4.2  -2.72344   TATTAAACTTTCAAC               CGGG GAAGAAG CCCG               TCATTCCGCGTGGAA  45 35
 C1O47_11165 2527696 .. 2527735 +  -2.8  -4.27965   CCTTTTCCCATTCCG  GCCCATGTCCCGTTTT TTTTACCC GGAGCTTGACATGGGC   TTTCCTTTTCATTAT  61 71
 C1O47_11170 NONE
        cysK NONE
        thiE NONE
 C1O47_11185 NONE
 C1O47_11190 2532414 .. 2532434 +  -2.4  -3.06501   TTCCGCTTTAATGCG            CCCGCGCT GCAAA AGCGCCCG            TTACATAGCCCTATA  42 133
 C1O47_11195 2532523 .. 2532556 + -21.3  -5.48028   GGCTACCACTTCTAA     TAAAAGAGCCGTCTC TCCA GAGACGGCTCTTTTA      TTTTCTTTTTATTTC 100 33
 C1O47_11200 NONE
 C1O47_11205 NONE
 C1O47_11210 2537057 .. 2537071 +   -10  -3.53811   CAATCTCGCGCCGCA               CGGCTT CCA AAGCCG               TTTCCCCCGGATCAA  70 332
 C1O47_11220 2539254 .. 2539283 +  -2.9  -4.29981   AGAGCTGATATTAAA       TAGAAAGCATGAA ACGA TTCTTCCTTTCTG        TTTTAGCTCTATTTG  61 255
 C1O47_11225 2539840 .. 2539851 +  -3.6  -4.63928   ATTTCAATTCGCGGG                CTGC AAGT GCGG                 TTTTTACGCTCATCT  68 82
 C1O47_11255 NONE
 C1O47_11260 NONE
 C1O47_11265 2548791 .. 2548816 + -18.3  -5.37345   AACTGCTCCATGAAG         GACGGGGCGGC CCTG GCCGCTCCGTC          TTTTTTATGCTTCAG 100 52
         cls 2551755 .. 2551778 +    -6  -3.61715   CTCTGCAACCTGGCG          CGACT-GACGG CCC CCGTCCAGTAG          TTCTTCCGGGGAATC  59 2
 C1O47_11285 2553438 .. 2553469 + -17.3  -4.14652   CTGCTCAAACCGTTT      GCGGGCAGCCCCT CCATAA AGGGACTGCCCGC       TTTGCTGTTTTTACT 100 55
 C1O47_11320 NONE
 C1O47_11325 2561889 .. 2561899 +  -2.6  -3.04864   TATTATACATTTGTT                 TAAT TAA ATTA                 TCCTTTCATTATGCA  42 98
 C1O47_11330 2563308 .. 2563322 +  -2.1   -3.2916   AAATAACCTCCCTTC              T-CCGG AGAC CCGGCA               TCTTCCCTTTTTCCC  44 35
 C1O47_11335 2566571 .. 2566581 +  -2.4  -2.72829   CCATGAATCATTAAA                 AGGG TAA CCCC                 CTTTGCAACCATCTG  39 19
 C1O47_11340 2568094 .. 2568122 + -18.9  -4.64861   CTGACTGTTTTTTCT        CCCTCCGGCAAGC ACA GCTTGCCGGAGGA        TTTGTTTTCCGGCCC 100 71
 C1O47_11345 2568455 .. 2568469 +  -8.6  -3.55622   TGTGCCGCCTCCCGC               CGGATT TCT AATCCG               TTTGCGGCAATTCGA  67 96
 C1O47_11350 2569468 .. 2569498 + -13.4   -4.7268   ACTTTTTCCTTACCG       CGTCCATTCCTG CTCCGTT CAGGGATGGACG       TTTTCTTCACTCTTT 100 40
 C1O47_11355 2572663 .. 2572673 +  -2.4  -4.72272   GAAAAGCATCCATCC                 CTCC CCG GGCG                 TTTTTCATGGAACGG  65 140
 C1O47_11375 NONE
 C1O47_11380 2576439 .. 2576455 +  -2.2  -3.10012   ACATCCGTTGAAATA              GCGG AAAAAAACG CCGC              TTCCATCCTCGGATT  42 60
 C1O47_11385 NONE
 C1O47_11390 2578063 .. 2578077 +  -2.7  -3.86015   TACTGAAAAAGCCAT               GGCGG CAATT CCGGC               TTTCTGCCACCAATG  54 214
 C1O47_11395 2579872 .. 2579901 + -17.9   -4.3739   CAATGTAAAACACAC       CAGAAGCGCCGGG TTCG CCCGGCGCTTCTC        TTTTCTACGGAAATG 100 64
 C1O47_11400 2580295 .. 2580307 +  -9.1  -4.07568   TTTCATTTCCTTCAG                CAGGG CAT CCCTG                TTTTCCGGAACAAGC  75 128
 C1O47_11410 NONE
 C1O47_11415 2582927 .. 2582949 +  -6.3  -3.78087   ATGAACCGGATGGCT           CTCACCAAT TCGCC ATGGGTGAG           TTTCCGGTTTTCCTT  61 317
 C1O47_11430 2584279 .. 2584312 + -15.3  -4.84359   GAAACAATGACTATT     AAAAGCCCGGCGGAA AGCA TTCCGCCGGGCTTGC      TTTTTATGAGACTCC 100 375
 C1O47_11455 NONE
 C1O47_11460 NONE
 C1O47_11465 2588925 .. 2588945 +  -3.4  -5.43866   TTAACTGACAAGCCT           TCCA-GATT CAAA AATCCTGGA            TTTTTTTGGAAATTG  83 50
 C1O47_11485 NONE
       cas5c NONE
       cas8c NONE
       cas7c 2601372 .. 2601414 +  -9.9  -3.65522   TTAAATCTCTGAAAC TG-ACAGAGGCACCTTCCGC GGCT GTGGGAGGTGCCTCTACGCA TTATTAACGTCCATC  77 46
 C1O47_11525 2609387 .. 2609397 +  -2.6   -4.7373   ATATTAATCACCAGT                 TTTT ATA AAAA                 TTTTTCATCCGCTCC  65 42
 C1O47_11530 2611802 .. 2611831 + -11.3  -4.65895   ACCGCTTCCATTTAC       GGGCTGCCCCGCC GAAA GGTGCGGCAGCCG        TTTTTCACTAAAAAA 100 60
 C1O47_11555 2616550 .. 2616568 +  -3.1  -4.07687   CGGATACCTCCGCAT             CCGGT CACCTTTCC ACCGG             TTTTCCGGAGAAAGT  56 96
 C1O47_11570 2620846 .. 2620874 + -18.3  -5.32882   CAGTTAAAAATGTTG        TTGCCTGCAAGGT TCT GCCTTGCAGGCAA        TTTTTTGTAATCATC 100 56
 C1O47_11580 2623019 .. 2623042 +  -3.1  -3.34398   ACGGTCCGATTGCAT          C-GGACCGCT TCCCC AGGGGTCCAG          TATTTCCAAACAACA  47 99
 C1O47_11585 NONE
 C1O47_11590 NONE
 C1O47_11595 NONE
 C1O47_11600 NONE
 C1O47_11605 NONE
 C1O47_11610 2630325 .. 2630335 +  -2.6  -4.79223   GCAGGAATTCCCCTT                 TATT TAA AATA                 TTTTTCATAATCTCC  68 5
 C1O47_11615 NONE
 C1O47_11620 2632230 .. 2632249 +  -3.6  -3.87116   AAATATCCTTTATTA            GAAAAATC CATC GTTTTTTC             TTTAGATTATATTTA  57 72
 C1O47_11625 NONE
 C1O47_11630 NONE
 C1O47_11635 NONE
 C1O47_11640 NONE
 C1O47_11645 NONE
 C1O47_11650 NONE
 C1O47_11655 NONE
 C1O47_11660 NONE
 C1O47_11665 NONE
 C1O47_11670 2642503 .. 2642515 +  -4.7  -3.51633   TGCCTCAGGATTGTG                CCGGG AGA CACGG                TTCTGTCAGGTATAT  54 419
 C1O47_11675 NONE
 C1O47_11680 2644664 .. 2644676 +  -6.3  -2.65139   AAAACATTTTGAAAA                TCTTG CGC CAAGA                CTATTCTTGCATAAT  50 137
 C1O47_11685 NONE
 C1O47_11690 2647022 .. 2647035 +  -2.3  -3.10164   TATAGAGTTCTCTTT               GGGAA AAAA TGCCC                TTGCATGATGAATAA  42 106
 C1O47_11695 2648118 .. 2648149 + -13.1  -4.67982   ACTCAACCAACGCAA      GCTCCGGCATG TGCCATCAAT CATGCCGGAGC       TTTTCTTAACTCCCC 100 58
 C1O47_11700 NONE
 C1O47_11705 2649783 .. 2649793 +  -2.4  -3.45592   ATCATCCTGAAAAAA                 GGCG TTA CCCC                 TCTTTCCTGACCATT  46 5
 C1O47_11710 2651107 .. 2651117 +  -8.2  -3.87977   TTTCCAGGGGACATC                 CGGC CCC GCCG                 TATTTTCTCCTGTTG  72 101
 C1O47_11715 NONE
        menD 2654849 .. 2654873 +  -8.5  -4.56597   ACGGGCATGCAAAAA          CCGGGCGGA ACATCAG TCCACCCGG          TTTTTGCAACCGCCC  82 363
 C1O47_11730 2660979 .. 2660991 +  -4.7  -2.69458   TGTCTATTGACACTC                AGCGG CGC CCGCC                CTATATTTTCTCATG  44 199
 C1O47_11735 2662010 .. 2662028 +  -8.8  -3.21276   CCGCGGAAATAAATC             TTCCGGGA CAT TCCCGGCA             TATTCTCAGGCAAAA  67 69
 C1O47_11750 2664525 .. 2664543 +  -2.2  -3.92324   CGCAGAAATGCCACA             CTTTCCGG AAA CCGGCGTG             TTTCGTATTCCCGCC  53 64
 C1O47_11760 2668706 .. 2668717 +  -2.2   -4.2693   ATCGCGGCGGAACTG                TGCT GAAT GGCA                 TTATTTTCCTAACTT  57 20
 C1O47_11765 NONE
 C1O47_11770 2671382 .. 2671394 +  -4.9  -3.17622   GGTCTGAGTCCAGAA                GATTT GAA AAATC                TCTCTTATGACCCTC  48 130
 C1O47_11775 NONE
 C1O47_11780 2672614 .. 2672628 +  -8.6  -3.53761   GGCCTGAAACTCCAT               CTGCTT AAA AAGCAG               TTTACAGCAGAATTG  67 18
 C1O47_11785 2673807 .. 2673822 +  -3.2  -5.40072   CGTATTTAATCAATC              TGGAAC TGGC GTGCCA               TTTTTTTCAACCACC  83 518
 C1O47_11800 2677387 .. 2677411 + -18.7  -5.02476   TTCATTTCTTCCCAT          GCCGCCGTTTT TCA AAAACGGCGGC          TTTTTTACGCCATCT 100 52
 C1O47_11815 NONE
 C1O47_11820 2680957 .. 2680987 +  -8.9  -4.90217   GATGCAGGATGCACC       CGGACGCTCCCCG GATTG CAGGAAGCGTCTG       TTTTTCATCTCTTTC  91 84
 C1O47_11825 2681624 .. 2681649 +  -3.2  -5.14563   CCATTTGCGCCATGA         CGCATCCCTGG ACGGG CCGGAGA-GCG         TTTTTTCCTGAAGAC  76 61
 C1O47_11830 NONE
 C1O47_11835 2685951 .. 2685961 +  -2.4  -3.68619   ATTGAAAATCAAAAA                 TCGG TTC CCGC                 TTTCCATGAGTTCCA  50 36
 C1O47_11840 2687463 .. 2687482 +  -4.2   -2.9175   CAATTCCGTAAGATT            GTCTTGCC ATAA GGCAGGAA             TCTCATTAAGGTCTC  47 133
 C1O47_11845 2688820 .. 2688846 + -13.8  -5.55769   ATTATTTCCTTCAAA         GCAGTTCCGC ATACATG GCGGAACTGC         TTTTTTATTGTCAGC 100 59
 C1O47_11860 2692014 .. 2692030 +  -3.7  -2.91383   TGGAAAATATTGATC              GCATTTC CCG GAAATCC              TGTCTAAATGGAAAT  45 58
 C1O47_11865 NONE
 C1O47_11870 NONE
 C1O47_11875 NONE
 C1O47_11880 NONE
 C1O47_11885 NONE
 C1O47_11890 2698249 .. 2698271 + -11.2  -5.27399   GCCCTCATCAAAAAA           CCGCCGGCAT TCC GTACCGGCGG           TTTTTTCATCTGTTG 100 61
 C1O47_11900 2699692 .. 2699712 +  -3.9  -4.34402   GAATAAGGGGGAAGA            CATCGGGAA ACA TTCCGGAAG            TTTTCCTCTCCCCCC  64 87
 C1O47_11910 2702686 .. 2702715 +  -4.2  -3.63744   GGAACCCCACGGCAA       TGTACACCTGGC AATCCA GCCAGGCATGCA        TCTTTTCCGGAGCCA  54 252
 C1O47_11925 2704588 .. 2704611 +   -16  -2.78384   TTTTACGGCTGCGGC          CCCTGCGCGG GCGG CTGCGCAGGG           TCTGGTACCCGGCCA  88 73
 C1O47_11935 2705724 .. 2705738 +  -7.2  -4.39748   AAAGTTCTATTTCCG               TTGACT GTG AGTCAA               TTATTTTATCTACTG  76 191
 C1O47_11945 2707354 .. 2707368 +  -3.5  -4.62069   GCGCCATGCTGCGCT               TGCCG CCGGC CGGTA               TTTTTCACATGGGCC  69 64
 C1O47_11955 2710209 .. 2710232 +   -16  -4.77036   ACAAAATGATTCGCG          GCCGGAGTCC TTCG GGGCTCCGGC           TTTTTAATGCTCCGG 100 54
 C1O47_11965 NONE
 C1O47_11970 2711596 .. 2711623 + -15.5  -4.40804   CTAACATTTTTTATC        CTGGCCGCGGC GTGAAA GCCGCGGCCTG         TTTTGTGCCATCATG 100 42
 C1O47_11975 2712469 .. 2712483 +  -2.1  -3.87994   ACGATTTTTCAAAAT              TGACCC TTAC GGG-CA               TTTATGGGCGTAACT  53 131
 C1O47_11985 2714126 .. 2714138 +  -3.3  -4.24342   TCAGGCGGCCCGCCA                TGGCA ATG TGCCC                TTTCTTGATGAACCG  61 345
 C1O47_12005 NONE
 C1O47_12010 2720530 .. 2720552 +  -9.8  -2.90496   CCGTCCATCGTTCTG           CCGTTCCCGG CTA CCGGAAATGG           TACTTTGGAGCCGGC  67 453
        lepB NONE
 C1O47_12025 2727657 .. 2727667 +  -5.4  -3.09313   TTGGCTTATTGGAAT                 TGGA TAT TCCA                 TATGTGTATCTAATT  51 84
 C1O47_12030 2728822 .. 2728841 +  -3.6  -4.12599   AACACATATTTAATG            CAATCTTA TGGT TTAGATTG             TTTTGGCGCATTATT  61 253
 C1O47_12035 NONE
 C1O47_12040 2731415 .. 2731440 + -18.3  -4.24342   TAGTTGGATAAAAAA         CCCGCACGGGG GAAA CCCTGTGCGGG          TTTATTCATCCCCCC 100 223
 C1O47_12045 2732158 .. 2732169 +    -3  -3.14686   ATGCCCCTTGAATAA                GTTT TTTC AAAC                 GTTTCTTCCGTTCAC  44 26
 C1O47_12050 NONE
 C1O47_12055 NONE
 C1O47_12060 NONE
 C1O47_12065 2735204 .. 2735214 +  -4.6  -3.15249   AAGCCATTTTCCTCC                 GCCT TGC GGGC                 TTCCTCACGCGTCTC  47 155
 C1O47_12075 2738366 .. 2738387 +  -6.5  -3.28791   TCTAATCCGGGGCCA           TGCCGCTCCG GGC CGG-GAGGCA           TTCTCAAAAAAACGT  58 251
 C1O47_12115 2749245 .. 2749259 +  -2.8  -3.30203   AAAATTCCGCTTCCT               CCTTGA CAC TCAATG               TTGAATTCTTCATCA  46 150
 C1O47_12120 2750311 .. 2750332 + -10.1  -4.61482   AGCCATTTCCTGCCG           GCAGGCGTC TAAG GGTGCCTGC            TTCTTTTTTCACCGG 100 55
 C1O47_12130 2751655 .. 2751702 +  -4.9  -3.53012   TCATCAGCCTCCTGC CGGGAGAATTCCTGCCCTGATGCC GTG GGAA-CAGG-C-GGAAGCCTCCCG TTTGAAAAAACAGGC  54 6
 C1O47_12135 2752299 .. 2752312 +  -8.1  -3.73072   AGGTACAGGTCTCCG               GGCAG TTCC CTGCC                TTTCATCAGGGCGTT  69 433
        secA 2761142 .. 2761153 +  -3.6  -4.07568   ACAGGCCGGGGGAAA                CGGG AATG TCCG                 TTTTCCCCGGCCCCA  59 59
 C1O47_12150 2762777 .. 2762804 + -13.6  -3.58343   CTCTAAAAGTAACAA        GCCCCTTAAA-CC GTT GGATTTAAGGGGC        TTTAAAGATGGTAGC  86 518
 C1O47_12160 NONE
 C1O47_12155 2762777 .. 2762804 -   -15    -3.965   CTCTAAAAGTAACAA        GCCCCTTAAACC GTTG GATTTAAGGGGC         TTTAAAGATGGTAGC  95 34
        uvrA 2751944 .. 2751963 -  -4.8  -5.10767   CACGGAACAGAAAAA            GGCAGGCG AATA CGACGGCC             GCCCCGGCATTCCCG  80 78
 C1O47_12125 2750010 .. 2750024 -    -7  -4.08216   TCATGCGCCTCAAAA               CGGCGG TTC CCTCCG               TCAAGGAATTTGACG  68 320
 C1O47_12110 2747474 .. 2747510 -    -8  -3.85698   GCCGCGCGCCATAAA   GCGGGCTGCCGGA-AACG ATA CGCTGCCCGGAAGCCC-C   AACAGCCCCGCACCC  72 95
 C1O47_12105 NONE
 C1O47_12100 2743167 .. 2743179 -  -4.8  -4.68645   TATTGAAAATGAAAA                CGGA CGCGT TCCG                GTATTTGCCGCAACA  70 366
 C1O47_12095 NONE
 C1O47_12090 2739619 .. 2739645 - -18.1  -5.03994   TTTTATATACAAAAA         GGCGCAGGCAT TTTGG ATGCCTGCGCC         TTTTCCTCTCCCACA 100 56
 C1O47_12085 NONE
 C1O47_12080 2738162 .. 2738179 -  -4.8  -3.53012   TTCCCGTTCCGGAAA             TGCCAC GGAATG GCGGCA              GAACACAAATTTTTG  54 237
 C1O47_12070 2735020 .. 2735051 -  -4.2  -4.05322   AAAGCTGGACAGAAA      CCGGCTGCGCTCCC AGTT GAGCGGACATCCGG       AAAAGTTGAAGGGAA  61 45
 C1O47_12000 2716528 .. 2716551 - -17.4  -4.05788   GTTCCGGAAAGCAAA          GGCGCGGCCG TATT CAGCCGCGCC           TGCCAGTTTCCATCC 100 51
 C1O47_11995 2714735 .. 2714773 -  -6.4  -4.63218   CCTCTGTCAATAAAA   CCTGCGGGTGAACATCCG GGG CGGCGGTCCTCCCGCCGT   GCGGAAGGGGCCAAA  76 51
 C1O47_11990 2713705 .. 2713722 - -10.5  -4.57073   CACGCGCTGGAAAAA             GCCAGGG AGAA CCCCGGC              GAATATCCTGTGCGG  93 208
 C1O47_11980 2712469 .. 2712483 -  -2.1  -3.05775   ACGATTTTTCAAAAT              TGACCC TTAC GGG-CA               TTTATGGGCGTAACT  42 184
 C1O47_11950 2706989 .. 2707014 -  -4.7  -4.62069   GGGGCATGGGAAAAA         GCGTTTGCTTT CATG AAGGCAAACCC          TGCGGGCCAGGTGGA  71 247
 C1O47_11940 2705379 .. 2705395 -  -5.7   -3.1505   ATGACGGTGGAGGAA              TGGGCGG AAG CCACCCT              GATCAAGGATGCCCA  52 378
 C1O47_11930 2704522 .. 2704560 -  -6.5  -4.57073   CATTTCCCTTAAAAA   GCGGGACGGCATTCCGT GACGG ACGGTAAACCGGCCCCC   TGCCCTCCTATTTTT  76 167
 C1O47_11920 NONE
 C1O47_11915 2702411 .. 2702448 - -16.3   -5.0538   CCCCACGGCAAAAAA   CGGGAACCGGCCGTCCCT ATT AGGG-CGGCCCGTTCCGG   ACAAAAAATAAAATC 100 39
 C1O47_11905 2699743 .. 2699772 - -18.7  -4.96501   TTCCATAAAAAGAAA       CCCGGCATCCCATG CGG CA-GGGATGCCGGG       CTGCAGGCCGCCCCG 100 73
 C1O47_11895 2698249 .. 2698271 - -12.7  -5.14563   GCCCTCATCAAAAAA           CCGCCGGCA TTCCG TACCGGCGG           TTTTTTCATCTGTTG 100 64
 C1O47_11855 NONE
 C1O47_11850 2688820 .. 2688846 - -13.8   -3.5393   ATTATTTCCTTCAAA         GCAGTTCCGC ATACATG GCGGAACTGC         TTTTTTATTGTCAGC  86 159
 C1O47_11810 2677983 .. 2678002 -  -9.2  -2.75562   ATAAACCGGGCAAAG            GGGGAAGG TTCA CCTGCCCC             AGCGTTCCGTAATGC  62 15
 C1O47_11805 2677000 .. 2677022 -  -4.6  -3.75505   CGTGAAAAAGGACAA           CGGCGGCCGC CTG GCGGACTTCG           TCTTTCAGTGCACGG  57 463
 C1O47_11795 NONE
 C1O47_11790 2673630 .. 2673641 -    -3  -5.41143   CATCCCGCAAAAAAA                GATA CCGG TATC                 TGCGTATTCGGATTT  83 181
        pyrE NONE
 C1O47_11740 2662008 .. 2662030 -  -6.2  -4.41348   TGCCGCGGAAATAAA           TCTTCCGGGA CAT TCCCGGCATA           TTCTCAGGCAAAAAC  71 58
 C1O47_11725 2654849 .. 2654873 - -10.7  -4.66163   ACGGGCATGCAAAAA          CCGGGCGGA ACATCAG TCCACCCGG          TTTTTGCAACCGCCC 100 91
 C1O47_11565 NONE
 C1O47_11560 2616469 .. 2616493 -  -3.5  -4.41348   TCCGTTTCAAAGAAA          CTGGTATTTGA ATT CCCAATACCCG          GCCTCATCTTCTAGA  64 86
 C1O47_11550 2614942 .. 2614979 - -12.8  -4.62069   TCCGTAGTCTAAAAA   GAGGGCCGATTGCACGA TCAGC TCGTGAAACCGGCCC-C   AATCATATTCCTAGG 100 51
 C1O47_11545 NONE
 C1O47_11540 NONE
 C1O47_11535 2611959 .. 2611984 -  -9.7  -5.07652   CTTCTTAAAAGAAAA         CCCCGCAAGCC TTTA AACTTGCAGGG          TTTATTAATGGTACA 100 34
 C1O47_11520 NONE
 C1O47_11515 2607472 .. 2607507 -  -6.8  -4.29396   AATCACGGAGGAAAA    CGCATCCCTTGATTCCG TGA CGGAAGCAGGGGA-GCC    TTCCTGTCCATTTCC  74 61
 C1O47_11510 2603357 .. 2603371 -  -3.4  -5.42259   TTACGTGGAAAAAAA               GCGCCG CGT CATCGC               AAACGTTCCTGGTAA  83 457
 C1O47_11505 2602048 .. 2602075 -  -2.6  -4.59853   CTAACCGTTGAAAAA        TTCCCACAG-GGC TTG GCGGCGGCGGGAA        AATTGGATAGGGAAT  65 135
        cas4 NONE
 C1O47_11475 NONE
        cas2 2593206 .. 2593225 - -13.6  -2.53911   GCAAGTTTCAATCCA            CGCACTCC TTGC GGAGTGCG             ACGCAACCGACTTTA  77 228
 C1O47_11450 NONE
 C1O47_11445 NONE
 C1O47_11440 NONE
 C1O47_11435 2584283 .. 2584308 - -20.5  -4.33105   CAATGACTATTAAAA         GCCCGGCGGAA AGCA TTCCGCCGGGC          TTGCTTTTTATGAGA 100 67
 C1O47_11425 2583119 .. 2583144 - -10.4   -5.7946   GCCGGAACAAAAAAA         GAGCGCCGGA TTCTCG TCCGCCGCTC          CTGTTAATCAAGCTC 100 59
 C1O47_11420 2582601 .. 2582627 - -12.3   -3.7574   GGCATCATGAAAATA        CCCGGC-CCCCT TTGC AGGGGAACCGGG         CGCTTTAACCATACG  85 51
 C1O47_11405 2579874 .. 2579899 - -20.5  -2.85987   ATGTAAAACACACCA         GAAGCGCCGGG TTCG CCCGGCGCTTC          TCTTTTCTACGGAAA 100 328
 C1O47_11370 NONE
 C1O47_11365 NONE
 C1O47_11360 2572584 .. 2572618 -   -33  -4.42386   CCCTGATGGACAAAA     GAAGCCCCCGCCGGCG CAA CGCCGGCGGGGGCTTC     CCATGCGGAAAAACG 100 103
 C1O47_11315 NONE
 C1O47_11310 2557567 .. 2557592 - -11.3   -4.8622   GCCGGGAAGCAAAAA         CCGGAAAAATA ACGG TATTTTCCCGG          CAGGGCATCCGTTCT 100 89
 C1O47_11305 2557191 .. 2557215 -  -7.7  -4.29106   CCGGATACTAAGAAA          TGGCGGGACGG CCG CAGCCCCGCTA          TTGGTGAAATAAAGA  76 61
 C1O47_11300 2555889 .. 2555915 -  -9.3  -3.16742   TTTAAGGGTTACCAA         CCGTACCGGGC CTTCC GCCCCGTCCGG         GACATTCAGCGGTCA  65 31
 C1O47_11295 2554250 .. 2554290 - -13.5  -3.28309   ATAGACATAATTCAA TAATGATGGCGTG-GGGA TTCATT TCCCGCACGCCGTCATTA  CATCGTGAAAGCACA  83 127
 C1O47_11290 2553141 .. 2553151 -  -2.4  -4.08692   GAAGCTTGCGGAAAA                 GGGG CTC CCCA                 CGGACGACGAACACT  56 361
 C1O47_11275 NONE
 C1O47_11270 2548790 .. 2548817 - -12.6   -3.1506   AAACTGCTCCATGAA        GGACGGGGCGGC CCTG GCCGCTCCGTCT         TTTTTATGCTTCAGC  79 70
 C1O47_11250 2543689 .. 2543704 - -11.8  -5.15969   TCCGAATGCAAAAAA              GCCGCC CGGA GGCGGC               TGTTTTTCCTGAACA 100 44
 C1O47_11245 NONE
 C1O47_11240 2541660 .. 2541690 -  -8.3  -3.56837   TGCTAAAGAGTAGAA      CACGATTCC-GCAC AGCG GCGCAGGAACCGCG       GTCAGGAGATGAACG  67 27
 C1O47_11235 2540404 .. 2540422 -  -8.2  -2.79796   TTTCATTCCATCAGA             GAGAAACA TCA TGTTTCCC             CCTTCTTAGCGCCTG  59 31
        ruvC 2539369 .. 2539384 -  -4.7  -3.44527   CACGGATGACTACAA              CCAGA GCCAGT TCTGG               ATAGGCAATTTTCCG  52 518
 C1O47_11215 2536506 .. 2536529 -    -3  -4.22375   ACACCATTGAAGAAA          CGCTCTTCCG CTTC CGGGACAGCA           TGAAGGAATCCGGAT  61 221
 C1O47_11150 2523866 .. 2523876 -  -4.6  -4.06904   CCAGTTAAGCACAAA                 GCCA AAG CGGC                 TTGTACTGTAGACAC  61 226
 C1O47_11145 NONE
 C1O47_11140 2521959 .. 2521983 - -12.9  -4.56597   CCCGCTGGTGAAAAA          GCTTTCCGCCC TGC GGACGGAAAAC          CCGGAACTGGCGCAA  95 380
 C1O47_11130 2518175 .. 2518202 - -20.6  -4.72272   CCCTGTCATGAAAAA        GCGCCGCCGTCC CGGA GAACGGCGGCGC         CCGAACACGCTAACC 100 51
 C1O47_11120 2516683 .. 2516706 -  -7.4  -2.52946   TTCCTTCATAAAATT          TGACGGGCAA GAGC TTACCCGTCC           CCCCCGCCAGCGTCA  55 162
 C1O47_11115 NONE
        pheT 2513063 .. 2513101 - -18.9  -5.65496   CATGAAAAATAAAAA   GCAGGCCGCGCGTTCCA GCTCA TGAAACGCGCGGCCCGT   TAACGGAGGTTACCT 100 35
 C1O47_11105 2511562 .. 2511578 - -12.3  -3.68222   CGCCAACCGGAACAA              TCCTGGC CCA GCCAGGA              GGAAGTGCGCTCCGG  79 475
 C1O47_11095 2509767 .. 2509796 - -18.7  -3.17075   CGCCCCCCAACGCAA       CAAGGGCTGAACC TGAC GGTCCAGCCCTTG        CCAATACGGAATTGA 100 57
 C1O47_11080 NONE
 C1O47_11075 2505917 .. 2505932 -  -5.4   -2.6296   GAAATGCCAATTAAG              GCCCAT GGCT ATGGAC               GAGAATGCCCCATTT  47 18
        proC 2504983 .. 2505032 -    -5  -4.55295   TCCGGTACAAATAAA GGCTCTCCACCAGGCCGTCCTTTC CGGA GAAAGC-CGGCTCCG-GGAAAGCC AGAAGAAGCATCCGT  71 40
 C1O47_11040 NONE
 C1O47_11035 2493284 .. 2493308 - -15.8  -5.00616   TCCGCCCGCAAAAAA          GAGGCCGGAT TTTTC ATCCGGCCTC          TCGCAACAGGTATTT 100 64
 C1O47_11030 2492224 .. 2492252 - -16.1  -5.25893   AGAGACATTAAAAAA        TCGCCTGCAAGGC TGG ACCTTGCAGGCAA        AAACGCCTTTAACTG 100 58
 C1O47_11025 2491127 .. 2491161 -  -2.9  -3.72576   CGGCTTTCTATCAAA     GCGGAAGCATTTT CAAAAGGAT AAAATGCGTCAGC     CACAGAAAGGAAAAT  52 55
 C1O47_11020 2489977 .. 2489993 -  -5.1  -2.57132   TGTTGTGCGTATAAG              CTCATGA TGG TCATGGG              TTGGAAAAAGAATTA  47 38
         pgi 2488391 .. 2488419 - -17.6  -5.45802   CCCGGAAAAGAAAAA        CGGACGCTTATC AACCG GATAAGCGTCCG        CCGAATATTATATGC 100 49
 C1O47_11010 2488073 .. 2488089 -  -3.7  -2.87881   GAATTGGTGGACATA              TCGATTA TTG TAGTCGA              ATTAATGATTCTGCC  45 83
 C1O47_11005 2485275 .. 2485300 - -19.1  -4.58395   CCCATCCGCTAAAAA         GCCCGTGGTTC CGAA GAACCACGGGC          TGTCTATTAACCCTT 100 52
 C1O47_10980 2476460 .. 2476475 -  -4.7  -3.64703   GTTCCGCCATTGAAA              GGGAA TCTTTC TTCCC               TGCCCCGCCGCTTCC  54 101
 C1O47_10970 2474984 .. 2475003 -  -4.2  -4.52857   AGCGTTCACATAAAA            TCCATGCC TCCA GGAACGGA             ATTCTCCGGGGGAAA  68 149
 C1O47_10930 2465750 .. 2465767 -  -4.1  -4.47888   GGAAGGTAAAAACAA             TCAGACA TTAA TGTCTGC              GGCGCCTTGCCAGAA  66 15
 C1O47_10915 2463480 .. 2463508 - -17.6  -4.54727   TCCGGCAAAGGAAAA        GGCCTTAAAGCG TTAAC CGCTTTAAGGCC        TTTATTTGGTGGAGC 100 32
 C1O47_10900 2460211 .. 2460258 -  -4.1  -5.09895   CATTCATCCAAAAAA CGGCATGTTCGTCCG-GCAGAA AACCA TTCCGCACGGAAGAACAGGGAG AATCCGCCTGAATGT  78 249
 C1O47_10890 2458677 .. 2458693 -  -4.3  -4.15854   AAACTTACCGGAAAA              CCCACGA TTT CCGTCGG              CTCTGTGGGGCTTAA  61 311
 C1O47_10875 NONE
 C1O47_10870 2455034 .. 2455054 -  -7.5  -2.78816   GCATGCTGTACTACA            CGGACGTGT ACA ACAAGCCCG            TCCAGGAATACTGGC  54 379
        pepT 2446268 .. 2446286 -    -3  -3.62597   CTTATTCCCGAATAA             CGGAATCG CAA CACCTCCG             CTTACCGCCATGTTC  49 43
 C1O47_10835 2444549 .. 2444580 - -14.4  -5.26316   GGACGGCATAAAAAA      TACAGACGCCGTCC GAAA GGGCGGCGTCTGGA       AAAAACGCGTGCGCC 100 71
 C1O47_10830 NONE
 C1O47_10825 2442808 .. 2442823 -  -5.4  -4.12947   AAATGAATTAAAGAA              TCAGAG CGTC CCCTGA               CTGGAATTCCGGAAC  66 2
 C1O47_10815 NONE
 C1O47_10810 2438260 .. 2438285 -  -5.3  -5.30575   GAAAAAGTGAAAAAA         GGCCGGAGTCC ATAG AGAATCCGGTC          TTTTGGAAAGGATAG  86 67
 C1O47_10805 2437283 .. 2437296 -  -3.9  -4.87291   GATGTCAATTAAAAA               TTAGT TTAA ACTAA                CTTTGCAACAAAAAA  72 127
 C1O47_10800 2436040 .. 2436051 -  -4.4  -2.90615   ATGCGGGTTAAATTA                CTTC ACAA GAAG                 TTCCTGAACCTTGTC  47 11
 C1O47_10795 NONE
 C1O47_10790 NONE
 C1O47_10785 NONE
 C1O47_10780 NONE
 C1O47_10775 NONE
 C1O47_10770 2429383 .. 2429439 -  -4.2  -4.86621   ATCCTGAATGAAAAA GGGCCGCACGCCTCTGCCGCTCCAGCC GGGA AACGGAAGCAT-AGGGTCGTGCGGCCT GCTTCGTGATGAATA  74 53
 C1O47_10765 NONE
 C1O47_10760 2426695 .. 2426709 -  -2.8  -3.92075   ACCTGCATTGATAAA               TGATGA AAT TCATCT               GCCATATTGCAGTGC  54 139
 C1O47_10755 NONE
 C1O47_10750 2425334 .. 2425345 -  -7.2  -5.00884   ATTCCGGTGAAAAAA                GCGG GAGA CCGC                 TGGATTGCCGACCCA  86 149
         lnt 2420064 .. 2420076 -  -4.7  -4.30844   AGGCCATGAGGAAAA                GCCCC TGC GTGGC                CGGAGTCAACGGAGG  66 515
 C1O47_10715 NONE
 C1O47_10710 2417018 .. 2417038 - -12.5  -4.08767   CCTATCCTCTGAAAA            CGCTGGTGG ACC CCACCGGCG            CGGGGGATACGTTCC  91 267
        crcB 2415630 .. 2415656 -  -8.6  -4.07687   AGTTCCCCTGTAAAA         CAGCGCGGCG GGCCATG CGCAGCGCCG         GGTTTCCATGTTTTT  74 42
 C1O47_10665 2407587 .. 2407598 -  -7.2  -5.96894   ATTGAAAGAAAAAAA                GGGG ATGT CCCC                 CATTTCCGGCCCCCT 100 62
 C1O47_10650 2404668 .. 2404680 -  -4.9  -2.87683   ACATGGTTGCACATA                TTGTT GTG AACAA                TATGTAAATATAATG  47 95
 C1O47_10645 2404097 .. 2404113 -  -3.6  -4.29176   ACAGGCAAGGCAAAA              CAGCAG GACGA CGGCTG              AATTTTTCTTCCTTG  64 89
 C1O47_10640 2403526 .. 2403560 - -13.7  -4.72272   TTTTTTCAGGAAAAA    GCGCTTCCTCC-AGAC GTTC GTCCCGGAAGAAGCGC     TCTTTTGAGGATAAG 100 64
        aroA 2397204 .. 2397219 -    -6  -3.55801   ATCAATCCCGTTAAA              CCCCGC CAGT GCCGGG               ATTTTCCCAACAAAT  58 190
 C1O47_10595 2395096 .. 2395132 -  -8.8  -2.83409   GACGAAGCCATGATA   CAGGGCCGTTTTGCATC CCCG GA-ACAGAACAGCCCTG    CGATGAATAGCGGTT  62 50
 C1O47_10580 2391454 .. 2391476 - -14.9  -2.67021   TCCGTAAACAGGAAC           CGCACCGGA GAATT TCCGGTGCG           TTTGAAAAGATGAAT  83 54
 C1O47_10575 2388837 .. 2388855 -    -3  -2.54523   GTATATGGTAATGGA             TGTTCAGG TCC CCTGGACG             GGGGCTCCGCCGGGG  40 10
 C1O47_10570 NONE
        queC 2387514 .. 2387531 -  -8.3  -3.12351   GCTTTTGAGACGGAA             GCGGGCC TGGC GGCCTGC              CGCAGCGTGTTTGCA  60 218
 C1O47_10550 NONE
 C1O47_10545 NONE
 C1O47_10540 2382795 .. 2382825 - -15.5  -5.38047   CATGGAGACAAAAAA      CTGCCCTCCGCACC GTGT GGCG-GGAGGGCAG       TCCGGATGGAAAAAG 100 56
 C1O47_10530 2380736 .. 2380761 -  -6.8  -4.20918   TGTAATCGGAACAAA         TGCCAGTGCC GCCAAT GGCACGGACA          ATGTTGTGATAGGTT  71 490
 C1O47_10500 2374183 .. 2374196 -  -2.3  -4.15453   CAATTCATGTTAAAA               TGCCG CCGC CGGGA                ATTCCAGCTATTTGA  57 77
 C1O47_10495 NONE
 C1O47_10485 NONE
 C1O47_10480 2367451 .. 2367477 -  -3.8  -2.51815   CCGAAGGAGGAAGAG        TCCG-TCACCT GGCTTA AAGTGAACGGA         GAGGACAAGGAGCTT  41 507
 C1O47_10455 2364149 .. 2364176 -    -9  -4.62302   GAAGATGTGTAAAAA        GACCGCCTGACC CGGA GGAAAGGCGGCC         TGTAAAAGGAAAAGG  90 53
 C1O47_10450 2362730 .. 2362741 -  -2.2  -3.92694   GAAAATCAGACGAAA                CTGGC AAA GCC-G                ATGTCCGGCCGGCGC  53 4
 C1O47_10445 NONE
 C1O47_10440 NONE
 C1O47_10435 NONE
 C1O47_10430 2358334 .. 2358344 -  -2.4  -3.91911   GGTATTGTAAGCAAA                 GAGC ATA GCAC                 TTTGGGGAGGTTTTG  53 124
 C1O47_10425 NONE
 C1O47_10420 NONE
 C1O47_10415 NONE
 C1O47_10410 NONE
 C1O47_10405 NONE
 C1O47_10400 2351161 .. 2351171 -  -5.4  -2.95449   AAAAAGAAGTTAAAG                 GTTG GCG CAAC                 GGGGGCAGGCTTCCA  49 9
 C1O47_10395 2350016 .. 2350026 -  -6.8  -3.41051   TTACGTGTAGGATAA                 TGCC GGG GGCA                 TGGTGATTAAAAGCT  60 128
 C1O47_10385 2348586 .. 2348612 - -10.9  -5.19879   TTCTAAATATAAAAA         CACCCCGGAAT ATTGA ATTCTGGGGTG         TTTAGAAAAATGGTA 100 36
 C1O47_10380 2347402 .. 2347413 -  -5.8  -3.21925   AGACGTGATCAGCAA                CGCA GACA TGCG                 GGCGGAGCATACGGA  55 134
 C1O47_10375 NONE
 C1O47_10370 2344880 .. 2344899 -   -15  -2.81173   ATGAAGTTGACGACA            GCTGCCCC GTGC GGGGCAGC             TTTTTTATTCAGTGA  84 91
 C1O47_10330 2336365 .. 2336378 -  -2.4  -4.25458   AAGTTTATGAAGAAA               GCAT GAAGGA ATGC                ATGGAGCGGAAAACA  57 146
 C1O47_10320 2335317 .. 2335347 -  -7.5  -3.22491   AAACTGTACCAGGAA      CCGGATC-CCCACC CTTT GGCGGGAAAGCCGG       CGGTGTGTTCTTAAC  61 61
 C1O47_10305 NONE
 C1O47_10300 2328460 .. 2328474 -  -2.8  -3.51958   ACTGCGAAAGAAAAG               CTTTTC GCG GAAACG               GGACTTTCTGCCATG  49 91
 C1O47_10295 NONE
 C1O47_10290 NONE
 C1O47_10285 2325803 .. 2325832 - -17.9  -4.56597   TGGGTCCGTTAAAAA       CGGGGCGGCTGAA CTGC TCCAGCCACCCCG        TTGAAAAAGGGAGTT 100 39
 C1O47_10275 2321066 .. 2321085 -  -3.5   -4.4261   GTTGTAATAGCAAAA            CTGCCGT CTGTGT AAGGCAG             GGCGGAACCGGAAAG  64 59
 C1O47_10265 2319335 .. 2319347 -  -3.3  -3.53811   GTGACGGCGTGTAAA                GGATG AAG CAGCC                GATGTCTGGAAGCTC  49 283
 C1O47_10245 2315384 .. 2315414 -   -24  -4.85782   TCCCTGAAAAAGAAA       GTCGCCCCGGCCGT AAA ACGGCCGGGGCGCC       CCAACTACCCTATGA 100 238
 C1O47_10235 2314805 .. 2314817 -  -7.7   -3.6003   GAAAGCACCCTGAAA                TTCCG CTA CGGAA                CGGGAACTCCGGAGG  63 222
 C1O47_10215 2308991 .. 2309021 - -20.6  -5.19212   ATCATCATTAAAAAA       GAAGCCGCGCTTCT GGC AAAAGCGCGGCTTC       TGATTGCATGCAAAG 100 193
 C1O47_10195 2304487 .. 2304497 -  -6.8  -4.57073   TATGTCCTGCAAAAA                 TGCC AGC GGCA                 AAACGGTAGGCGGGA  76 153
 C1O47_10185 2302754 .. 2302802 - -15.3  -3.48807   TGATTAAAGTCAGAA CGGCCTGAACCTCATTCCGGA AAAACAG TCCGGAATGGAGAACAGGCCG TTTCTTCAATTTGCG  91 54
 C1O47_10175 2301524 .. 2301571 -  -7.8  -4.15884   GGAAGCAAATAAGAA CGCAGA-G-CGGCCGGGATTCC TCATTG GAAATCCCGGCCGACGTCTGTT GAGGATTTAAGGGAG  74 44
 C1O47_10110 2289714 .. 2289726 -  -7.7  -2.78596   CATGGCTTGATGATA                CACGA TTT TCGTG                AATTGTCGATAGAAA  56 89
 C1O47_10105 2288819 .. 2288831 -  -7.7  -3.54424   TCCGATTTCCGGAAA                CAGGA GTT TCCTG                TCCGCTTTTCTGCGC  63 89
 C1O47_10095 2286888 .. 2286903 -  -5.4   -2.6176   AATTTCATTGATAAG              CCGCAT TTTG ATGCAG               TTCGGCAGAGCGGGG  47 425
 C1O47_10085 NONE
 C1O47_10080 2284679 .. 2284697 -  -5.8  -4.93296   GCAGTACTATAAAAA             GGTGGTGG GAG CCCCCTCC             ATGGTCTTTCTTCCG  82 236
 C1O47_10055 NONE
 C1O47_10050 NONE
 C1O47_10045 2279091 .. 2279122 -  -4.3  -2.62579   TGCGGAAAAGAAAGG      GGGCTGCCTACTG TTGTTC CAGTAGGCGGACG       ATCCAGCAGAAGGAA  44 1
 C1O47_10040 NONE
 C1O47_10035 NONE
 C1O47_10030 2276228 .. 2276249 - -12.9  -2.70298   GGCCTGAAGGATAAG           GGCGGGCGC GGAA GCGTCCGCC            TTCCTGCCGTCACGG  76 35
 C1O47_10025 2275650 .. 2275662 -  -3.3  -3.60151   TCTGGGAAAGGACAA                GTTGC CGT GCTAC                ATCGGAAATGTTCTG  49 64
 C1O47_10020 NONE
 C1O47_10015 NONE
 C1O47_10010 NONE
 C1O47_10005 NONE
 C1O47_10000 2268677 .. 2268717 -  -6.2  -3.85698   TGCGGCTGTGAGAAA GCCGCCCTTTCTGGGGAATA CGG CATTCCCG-GAGAGG-CGGC TCCAGAAAAGGGGCG  64 56
 C1O47_09960 2258377 .. 2258395 -  -3.1  -4.26903   GTCATGTTACTAAAA             CCTTATC TGGAC GATGAGG             TGTAGACCAACTTTA  59 103
 C1O47_09935 NONE
 C1O47_09930 2250909 .. 2250925 -  -3.6  -3.36823   GCGGCGAAAACGGAA              CTCCGG AAAAA CAGGAG              GGAAGGGGAGCTTTT  50 39
 C1O47_09925 NONE
 C1O47_09920 2249561 .. 2249573 -  -3.3   -4.4078   TCTGTCCAACTAAAA                TCACG AAG CGGGA                GCGTACGAGCGGCCG  61 13
 C1O47_09915 2247774 .. 2247789 -  -4.6  -3.29511   GTGATTGCGCCAGAA              GGGGAG TGAC CTCTCC               GGAGAAAGGGAAAGA  50 43
        hprK 2243820 .. 2243834 -  -4.2  -3.31501   AGTAAGGGGTGATAA               CGGTTG CTA CAACGG               TAAGTACACTAATTA  50 71
 C1O47_09890 NONE
        ptsP NONE
 C1O47_09880 2239808 .. 2239865 -  -9.3  -2.79212   AAGGGAATAAAAACG GGAAAGCCGCACCATACTCCCTGTTTTC TTA AAAGAAAAGG-GAATAATGCGGCTTTCC AGGGAGGGATGGAGA  62 46
        argF 2238856 .. 2238876 -  -6.8   -3.4072   GATTGGGTAGGATAA            GCCGGG CGGATTATC CCCGGC            GGGCGTCTGCAAGCG  60 15
 C1O47_09870 2238417 .. 2238429 -  -3.3  -3.93166   TCTGGAAAAAATCAA                TGGTG TTC CGCCA                TTTTTATGGCGGCCT  54 9
 C1O47_09865 2237943 .. 2237972 -  -9.2  -2.66695   CCGTCCATGAAAGAG       GCGTGCGGTACG GGCCTG CGTACCGGGCGC        GGGATGAATAGGCGC  61 71
 C1O47_09850 NONE
 C1O47_09845 2231151 .. 2231164 -  -6.7  -2.53876   CTTTATTCCAATGCA               GTAGC CACC GCTAC                GGCAGCCATAGGAGC  50 330
 C1O47_09820 2226361 .. 2226373 -  -2.6  -3.21934   GCTTTTGTACAAAAT                GCCC GGAGG AGGC                TCAAGCATTATCAGC  44 91
 C1O47_09815 2224949 .. 2224976 -  -6.2  -3.06737   GAGGAAGCGGGAATA        TGGCGTTCAGGC TCCG GCATAAACGCCC         GGGAGGATTTCCTTC  53 4
 C1O47_09810 NONE
 C1O47_09805 NONE
 C1O47_09795 NONE
 C1O47_09790 2220786 .. 2220796 -  -4.6  -3.91506   TGAGCGTGAAAAATA                 CCCC ATG GAGG                 AACAACTTTTGCCTC  59 93
 C1O47_09785 NONE
 C1O47_09780 2218739 .. 2218772 -  -9.7  -2.94422   GATTGGTAAAAAGAC     GGGCATACACTTC GGATGATT GAAGTGTATGCCT      TATGCTTTATATTGA  67 32
 C1O47_09740 NONE
 C1O47_09735 NONE
 C1O47_09730 2206198 .. 2206211 -  -3.7  -2.55061   ACAATGCCATAACAG               GCCGG CTTC CCGGG                GCATCCTCAGTTATG  42 32
 C1O47_09725 NONE
 C1O47_09720 2203658 .. 2203669 -  -5.8  -2.64794   GGCAAGCGTATAGCA                TCCC GGAC GGGA                 TATTACAGGGATGTC  50 129
 C1O47_09715 2202461 .. 2202477 -  -2.9  -4.67755   AGAGCCAGTTAAAAA              CGGGTAA TAT TCAACCG              TTTGGCATGCCACCT  66 149
 C1O47_09710 2201524 .. 2201542 -    -3   -5.2112   AACAGCAGCAAAAAA             GGAAAGCG CCG CCCCTCCC             ACCCCCCGGAGCCAT  76 149
 C1O47_09690 NONE
        xseA 2190875 .. 2190887 -  -4.8  -2.90901   ATATTCTCAAGCAGA                GCTG AAAAA CAGC                TTCTGCAGAACCTTC  47 507
 C1O47_09655 NONE
 C1O47_09645 NONE
 C1O47_09640 2182177 .. 2182200 - -13.9   -5.1861   TTTATCATGAAAAAA          GCGCCTTCC GGCAAG GGAAGGCGC           TGGATATGAAAAGGT 100 55
 C1O47_09620 2177806 .. 2177829 -  -8.2  -5.43414   AGTAGAGACAAAAAA          TCCCGCCATGA TGT TCA-GGCAGGA          ATCATTTTATTTGCT 100 55
        ssrA 2177371 .. 2177412 - -12.5  -4.82901   GCGGTTCTATAAAAA CAACAACCGCAAGCCTT GTTTTTCA AAGACTTGCGGTTGTTT  TGAAATGGTGGAGGC 100 31
 C1O47_09580 2170866 .. 2170894 - -18.3  -4.77173   CTTCTACAAAACAAA        GTCCGCAGGATCA AGA TAATCCTGCGGAC        TGTATGACGGGAAGG 100 57
 C1O47_09575 2170113 .. 2170131 - -10.3  -4.76802   CTGAAAAATAAGAAA             GACGGCA TTGCT TGCCGTC             CCAGCTGCCGCAATA 100 208
 C1O47_09570 2169575 .. 2169598 -  -9.6  -3.95772   AAGAACAAACGGAAA          CCTGCCCCAT ACTG ATGGAGCAAG           CGCCGTTACAGACCC  77 159
 C1O47_09560 2168427 .. 2168437 -  -3.2  -3.26042   TCAGGCAAAAACAAT                 CTCC CCG GAAG                 CCCTTTTAAAAAAGA  46 114
        trpB 2167084 .. 2167119 -   -17  -2.71011   AGCCTTGCGTAAGGA    TGGCGTATGAAGGATG ACGG CACCCTTCATACGCCG     AAAATGAGGAAAGGC  95 48
 C1O47_09550 2166108 .. 2166120 -  -6.3  -3.23708   GGCTGGGAAAAATCA                TGCTA GCA TAGCA                GCCAGCGGTTCTGCA  55 10
 C1O47_09545 NONE
 C1O47_09540 NONE
 C1O47_09535 2162138 .. 2162152 -  -2.8  -3.04515   AAAGAGGGGTGAAGA               TTAGTC TTT GACAAA               AGGAACCTGGAGTTT  44 11
        cydB NONE
        sucA NONE
        sucB 2156821 .. 2156831 -  -2.6  -3.93262   GCGCAACAGACGAAA                 TTTT TTG AAAA                 TACAGCGGTTTTAGA  53 336
 C1O47_09515 2155883 .. 2155894 -  -7.2  -4.30014   GGGAGTAAGCCAAAA                CGGC TCAT GCCG                 CATTGAAGTACGGAA  76 189
 C1O47_09500 2151880 .. 2151907 - -10.5  -5.03314   TCCATGCGCAAAAAA        GGCGGTTCCGC AGTATA ACGGAGCCGCC         GGAAGACCGTAATAA 100 57
 C1O47_09480 NONE
 C1O47_09475 NONE
        cobD NONE
        cobT 2139484 .. 2139499 -  -3.2  -4.59773   CGCCAGGTTGAAAAA              CAG-GGC CGT GCCGCCG              AAGGTCCCCAGGCGG  66 373
 C1O47_09455 NONE
 C1O47_09450 2137687 .. 2137705 -  -5.2  -3.14132   TCTTTTCCTGACTAA             CGGGAGAA CCG CTCTCCGG             GCGTTTCAGCCTTTT  51 31
 C1O47_09445 NONE
 C1O47_09440 2137152 .. 2137176 - -11.4  -4.66938   ACTGGTAATAGAAAA          CCCTGGGAGC GTTTA GCTACCAGGG          TTTATTGATTGGTAC 100 35
 C1O47_09425 2134753 .. 2134765 -  -6.3  -4.16146   AAAATATTCTGAAAA                TCTTG CGA CAAGA                CTATTCTGCATAATT  68 399
 C1O47_09410 NONE
 C1O47_09405 2130002 .. 2130014 -  -4.8  -2.67244   TGATAGTCAAACCTA                TCCG CAGCC CGGA                GGGATGTCAAACATT  44 10
 C1O47_09400 2128575 .. 2128601 - -12.2  -3.06815   ATCCTTTTCAAGAGA         CCGGGCGGGG AGAAGAG CCCCGGCCGG         ATTTTATCTGCAAGA  74 100
 C1O47_09385 2127071 .. 2127095 -  -8.5  -5.14563   CGGGGTATGAAAAAA          TTCTGGATGCC CTG GGCATCCGGCA          CGGGGAAAAGGAATA  93 107
 C1O47_09375 2123541 .. 2123551 -  -6.8   -4.0492   GAATCCGGAGAGAAA                 GCCA ATT TGGC                 TGTATTGAGGCCCTG  68 390
 C1O47_09355 2113553 .. 2113572 -  -7.8   -3.7282   GGAGTTGATCAACAA            GTTCCGCA CGTT TGCGGAGC             AAGCCGTAGCCGAGG  67 194
 C1O47_09340 2109472 .. 2109498 - -16.6  -5.28176   GGGAGGGATAAAAAA         CGCCCCGACG GATATGG CGTCGGGGCG         TGACAAGGGTTAAAT 100 66
 C1O47_09330 NONE
         rpe 2104048 .. 2104064 -    -5  -3.10796   CCTGATGACGGAATA              CCGGGG ATGGA CTCCGG              CGTTTCAGGGCGGAT  51 77
        rpsT 2095954 .. 2095982 - -15.3  -5.20781   GAGTAGAAAATAAAA        CAAGCCGCTCAGC AGA ACAGAGCGGCTTG        CCATAAAGAATCGTC 100 60
 C1O47_09295 2095657 .. 2095676 -  -9.2  -3.01712   GTTTTTTCCGTAACA            CGGCGCAG TTGC CTGGGCCG             CGGAAGAAAGCATAG  63 64
 C1O47_09285 2093251 .. 2093262 -    -3  -3.61764   TCATGAACGTTGAAA                TTCA TACC TGAA                 TTCCGGGAGGGAGAC  49 15
 C1O47_09280 NONE
 C1O47_09275 2091140 .. 2091164 - -17.2  -3.28712   TCTTCCTGTTCACAA          GCCGTACCGG TTTTT CCGGTACGGC          TTGTTTATGGTTTCA 100 107
 C1O47_09215 2073004 .. 2073016 -  -4.8   -4.4009   GTCTATCTTATAAAA                CGTC CACAT GACG                CTATTTTGCTCTCCT  66 215
 C1O47_09210 2070635 .. 2070660 -  -8.2  -4.61482   CCTCGGAAAAAAGAA         CCCCGGTTCCC TGAAT GGGG-CCGGGG         CGGCAAGGAGGTTCG  86 55
        rpiB 2068772 .. 2068800 - -17.5   -4.2558   GACTTTTGATGAAAA        GGCCGTTCCGC GGTAAAG GCGGAACGGCC        TGAAAAGCGTTTATA 100 52
 C1O47_09175 NONE
        rimO 2059589 .. 2059601 -  -3.3  -3.21934   GCCTTTGCAGAAAAT                CCGGA AAG TCGGG                CGGAAAACAGGAGGC  46 111
 C1O47_09160 2056657 .. 2056683 -   -13  -5.38047   CACGGATAGAAAAAA         GGGCACGTTTCC TTC GAAAGCGTGCCC         TTTTTGATACTACGG 100 65
 C1O47_09140 2052058 .. 2052074 -  -8.7  -2.70298   GCCCGTAAGGAGAAT              CACATGC CGG GCATGCG              GGCTGGTTTTTCCTG  59 181
 C1O47_09120 2048445 .. 2048457 -  -4.7  -3.87815   TGGCAGCCGGATAAA                CGGGC TGG GCCGG                GGCCGGGTAGGAATT  59 40
 C1O47_09115 2048120 .. 2048130 -  -2.4  -4.56597   GCTGGTGGTGAAAAA                 GCCC TGA GGGA                 AAATGGCTATTTGAC  62 32
 C1O47_09105 NONE
 C1O47_09100 NONE
 C1O47_09095 NONE
 C1O47_09090 NONE
 C1O47_09085 NONE
 C1O47_09080 NONE
 C1O47_09075 NONE
 C1O47_09070 NONE
 C1O47_09065 NONE
 C1O47_09060 2034979 .. 2034990 -  -5.8  -4.95806   AAATCAGGAGAAAAA                CTGG AGCA CCAG                 CGTGGGGAAGAAGCC  81 2
 C1O47_09055 2033235 .. 2033254 -  -3.7  -3.70902   TGGGGGACAGGCAAA            TAATTAG GACAGG CTAATTA             CGTTTGGCCTGGGGG  54 305
 C1O47_09050 2031833 .. 2031847 -  -6.4  -4.58283   GAAGCCCTGGAAAAA               TCCCTG TGG CAGGAA               TGCGCCAGATACGGC  75 470
 C1O47_09035 NONE
 C1O47_09030 2026983 .. 2026996 -  -3.7  -4.83169   AGCTCTGGAGAAAAA               CGAGG CGGC CCGCG                AAATTCTGTGGCTAC  72 297
 C1O47_09020 NONE
 C1O47_09015 NONE
 C1O47_09010 NONE
 C1O47_09005 2021510 .. 2021525 -  -3.2  -4.13561   GTTGTTCAAAAAACA              GGAACC TCGG GGTTCT               ATTTTTCTTCTTGTA  59 64
 C1O47_09000 2020639 .. 2020666 - -10.5  -5.10077   AAATACGTTAAAAAA        CGGCGCGGACT ACAGAA AGCCCGTGCCG         TTTGGGGATAGGAAA 100 62
 C1O47_08995 NONE
        mviN 2017870 .. 2017881 -  -5.8  -3.05384   CCTCCCTCTATGGAA                GGGA TTTT TCCC                 GTCAGCATTTCAGGA  53 27
 C1O47_08985 2016500 .. 2016524 - -11.4  -4.86621   ATCCGGAAGTAAAAA          GGCGTTCCGC TTGAC GTGGAACGCC          TTTTTATGGTGATCA 100 48
 C1O47_08980 2015832 .. 2015856 - -12.2   -5.4505   TTCGGGAAGAAAAAA          CGGCTTCACC TTTTG AGTGAAGCCG          TTTGGCAAAAGCTGA 100 50
 C1O47_08975 2014586 .. 2014602 -  -3.6  -2.75294   CCAAACCTGCGAAAT              CTCCCG GAAAG CGGGAT              TTTTCCTGTTCTCAG  44 37
 C1O47_08970 NONE
 C1O47_08965 NONE
 C1O47_08960 NONE
 C1O47_08955 2008981 .. 2009009 - -17.5  -3.91897   CCCTCCATGCACAAA        GCCTTCCTCCACT GGA AGGGGAGGAAGGC        TGCCGGAAAAGAAGC 100 191
 C1O47_08950 NONE
 C1O47_08945 2007029 .. 2007058 - -13.5  -2.54193   CATCAGGTTAATTGA       GGGCCGCAGCTGT AATA ACGGCTGTGGCCC        TTGCCGTTGCGAGGC  77 108
 C1O47_08930 2004961 .. 2004977 -  -2.2   -3.6328   GAGAGATATAAAAAC              GGTTCC TGCTC GGAATC              AAGCCTATATTACGG  47 35
 C1O47_08925 2004602 .. 2004626 - -17.1  -4.37527   GGAGAAGGATGAAAA          GGCCCCGGGCT GGG AGACCGGGGCC          TGGCCGGATAGAGAG 100 90
 C1O47_08920 2004088 .. 2004115 -  -7.6  -2.76696   GCTTCCGGGAAGAAG        CGGACGGCAACC GCAT GGTTGCCGCTTG         ACTTACCGGCGGTTG  56 28
 C1O47_08910 2002404 .. 2002438 - -21.6  -2.72049   GACAGGTTTTAATCA     GGAAAGGCGCCGGA TATTACT TCCGGCGCCTTTCC     TGCATCTGCCTTCCG 100 410
 C1O47_08890 1999483 .. 1999493 -  -2.4   -3.2614   TATTTTTTACAGGAA                 CAGC CCG GCAG                 CCAGCATGGCGAGGT  44 6
 C1O47_08885 NONE
 C1O47_08880 1998068 .. 1998078 -  -5.4  -3.15544   CGTCATCGGCAGCAA                 TCAG AAA CTGA                 CAGGTTATGGCGGGG  50 255
 C1O47_08865 1995364 .. 1995388 -  -3.6  -4.03995   GCCGCCAGAAAAAGA         GCGGAAAAGAA TCTG TTCATT-CCGC          CAGACTACTTCCAAG  59 158
 C1O47_08860 NONE
 C1O47_08855 1987538 .. 1987552 -  -3.4  -3.06796   GTTCATGGCAGGGAA               GCAGGA TCC CCCGGC               AAGGGGGAAAGCGGA  44 224
 C1O47_08850 NONE
 C1O47_08845 1981466 .. 1981477 -  -5.8  -4.20883   GAAAAAGCGGGAAAA                CGGA GTTG TCCG                 GGAAGAGGGGGTTAT  68 37
 C1O47_08810 1972383 .. 1972399 -  -6.5  -3.14132   TGGCGCGTCTACCAA              TTTCGCC ACA GGCGCAA              CGAATGGGCGGACGC  56 503
 C1O47_08805 1971841 .. 1971851 -  -8.2  -4.10453   GAAAGCGTGGTAAAA                 CCCG GTC CGGG                 GCTGGTGCAGATGGG  73 487
 C1O47_08785 1966898 .. 1966908 -  -5.4   -4.8622   CTGGTCAATGAAAAA                 TCCA ATG TGGA                 TTACCGGAACGCTGG  80 468
 C1O47_08770 NONE
 C1O47_08765 NONE
        pflB NONE
        pflA 1958306 .. 1958316 -    -4  -3.53343   AAGCCTTGCGGGAAA                 TTTC CGG GAAA                 GAATAATCTGGGAAG  52 279
 C1O47_08745 1955893 .. 1955917 - -13.5  -5.52384   TGGTCAGCAAAAAAA          GACCGGCACCC GGC GGGCGGCGGTC          TTCTTGAAATCTGTG 100 53
 C1O47_08740 NONE
 C1O47_08735 1953991 .. 1954016 - -20.5   -3.6715   TCAGCCAATTGGAAA         GCCGCTGCGGA ATCA TCCGCAGCGGC          TTTTTTCATGAATGG 100 95
 C1O47_08650 1927787 .. 1927799 -  -4.7  -4.62302   CAATACTCTGAAAAA                GCGCC TCG GCCGC                AAGCCTCCCATGGGC  71 125
 C1O47_08640 1925990 .. 1926004 -  -7.2  -3.81954   GGCAAAATAAAGGAA               TCCTTT CTG AAAGGA               GGTCTGGCCGGAGGG  69 81
 C1O47_08635 1924174 .. 1924201 -  -2.6  -4.14243   TACGGCAGGTGAAAA        CCGCCGGTCCGCA TTC TGCGGAAAAG-GG        AGTGCATGGGGGCTT  57 116
 C1O47_08605 NONE
 C1O47_08600 1914771 .. 1914797 -  -4.4  -4.53034   TCCATATAAGGAAAA        GTGCGG-GCAT GATGGA ATGCGCCGCTC         CTCAGGTCAGAAGAA  71 209
 C1O47_08590 1914532 .. 1914545 -  -3.7  -4.63218   TTTCCCTGAATAAAA               GGGGG TAAG CCGCC                GGCCCGTTGGGGAGC  68 63
 C1O47_08570 1910523 .. 1910550 -  -5.5  -2.74756   AAACCACGGGAATCA        CCCATGCGGGA AAGGCG TCAGGCATGGG         TGGGCGGGGAATAGG  48 15
 C1O47_08565 1909188 .. 1909201 -  -2.3  -3.53224   GATGCGTTTCGGAAA               GGAGC GTGC GCTGC                GGTGTTTCAAACAGG  47 256
 C1O47_08560 NONE
 C1O47_08555 1907950 .. 1907975 - -18.3  -4.79352   TCAGGCATAAGAAAA         CCCCGCCTGCC GTTA GGCAGACGGGG          CCGTATCTCTGGTTT 100 67
 C1O47_08535 1902361 .. 1902387 - -11.6  -4.49337   CTACAAGGCAGAAAA         GCGCACCACG GCAGAAT CGTGATGCGC         TGTATAAGGAATGAA  95 59
 C1O47_08530 1901208 .. 1901231 - -19.6  -4.67641   ATCTCAAAAGCAAAA          CCCCGGACCG CAGG CGGTCCGGGG           CGGCTCCCTTTTTCC 100 70
 C1O47_08520 1899942 .. 1899955 -  -2.4  -2.73701   TCCCAGCAAAGGAAG               GAAG GTCAAT CTTC                TATTGATGAGTTCCA  39 63
 C1O47_08515 NONE
        menA 1898228 .. 1898241 -  -6.7  -3.22298   CGGATTCATGATGAA               CGTAG TTAA CTACG                CTGGCGGGGTTAAGC  58 46
 C1O47_08505 NONE
 C1O47_08500 1896681 .. 1896717 -  -6.3  -2.72991   TCAGACGCTGAAGGA    CCGGGGCGTGCTGTACC CCT GTTTCTGTACGCGCCGG    GAGATTGCGGAGGAG  51 493
 C1O47_08490 1894118 .. 1894129 -  -5.8  -3.96216   CCTCTAGGCAAAGAA                CCTC GGAA GAGG                 TGTCCCGGTAGGTCA  64 293
 C1O47_08470 1890250 .. 1890262 -  -6.2  -3.44527   CACTGATGACGATAA                GGGC GAACA GCCC                CAGGCAGAGGTTCCA  57 295
 C1O47_08465 1888417 .. 1888432 -  -3.2  -3.54424   TGTGATCGGCGGAAA              GGTCCA TGCG TGCACC               TGCCGGGCAGGGATG  49 67
 C1O47_08460 NONE
 C1O47_08455 1885997 .. 1886018 -  -7.2  -3.73042   TGCTGGATGAAAAGA           CCCAGGGG GAAGTT CGCCTGGG            AGGCATCGGCAAGGT  67 407
 C1O47_08440 1883534 .. 1883549 -  -7.5  -3.24598   AAGAAATTATCAAGA              CCGCC TGCGTG GGCGG               GCAAACGCCGTTAAC  61 122
 C1O47_08435 NONE
        pdxA 1882335 .. 1882354 -    -2  -3.81503   CGAAAGAAGAAAAAC            GTTAACGC GTCT GCGCCATC             TGTACGGCCAGCTGG  53 7
        rpsF 1881543 .. 1881568 -    -9  -5.60689   GTACATAAGAAAAAA         GAACCGCCCC TTCACG GGAGCAGTTC          TTTTTGGTGAAAAGC 100 74
 C1O47_08395 NONE
 C1O47_08390 1874838 .. 1874863 -    -4  -3.61398   CCGCCTGGGGAAGAA         GCATGCAGCCT TTTTC AAGCCGC-TGC         CTCCTGGCTGGAAAG  52 72
 C1O47_08380 NONE
 C1O47_08375 1872135 .. 1872151 -  -2.2  -2.79098   GCTATTCATGAAGTA              CGGCAT TCATG ATGCCC              CGTCCGGAGGCGTCA  39 58
        lepB NONE
 C1O47_08365 NONE
 C1O47_08360 1867557 .. 1867575 -  -5.3  -3.66178   CTTTCCAAGGCCAAA            CCGG-ACA TGAT TGTTCCGG             ACCTGCTTGTTCTGC  56 445
 C1O47_08325 1862187 .. 1862200 -  -6.7  -3.27298   TTTTTCAAGGATGAA               CAGGA TGGT TCCTG                GAAGCTGGACTGGCA  56 509
 C1O47_08315 NONE
 C1O47_08310 NONE
        uvrA 1857524 .. 1857550 -    -3   -4.3078   AAGGAGACGAATAAA         CTCCGGGA GGCAGATTTTT TCCCGAAG         ACGCCGGGAACGGGA  61 87
 C1O47_08300 NONE
 C1O47_08295 1854815 .. 1854833 -  -6.6  -3.19463   TGCATGATTTATGAA             GGCAGGCC GTT AGCGTGCC             GCACTCATTTCTGCG  54 288
 C1O47_08275 1851940 .. 1851980 - -16.3  -3.72302   CGCAGAGCAAAAAAG  TTTGAGGCCTTGCAGAATA CTT CATTCTGCAAGGCCTCACG  AATGGGAAAATGGTC 100 36
 C1O47_08270 NONE
 C1O47_08265 1848819 .. 1848853 -  -8.6  -3.53012   CTTTCTCCCCTGAAA    GCCCC-GATGAAGAG CTGACT CCCTTCCTCTGGGGC     ATTATCAAAGAAATA  64 488
 C1O47_08245 NONE
 C1O47_08240 1845198 .. 1845210 -  -6.2  -2.83449   AGAGGCGGATAAGTA                CGCC CGTCT GGCG                AAAGTACGTTTTGAC  49 80
 C1O47_08230 1844122 .. 1844132 -  -5.4  -3.71998   CATTCAGGAATACAA                 TGTG TAC CACA                 ATATGGGATCCTGGT  59 129
 C1O47_08205 1834997 .. 1835027 -   -11  -4.06505   CGAATACATGACAAA       GGCCTCCGGTGCGT TGA ATGTGCCGGAGGCC       TTTTACATATGGGGA  86 72
 C1O47_08190 1832777 .. 1832802 -  -6.1  -4.87133   ACGGTGTAAAGAAAA         CCGCCGC GGGGTGGGAGGT GCGGCGG          AATGGAGAAAATGAT  78 58
 C1O47_08170 1830775 .. 1830800 -  -9.8  -5.27335   GCCTGCAAATAAAAA         CCCCGTTTTCC GGGAA GGAAA-CGGGG         TTGGAAAATTGCTGA 100 50
        tilS 1829259 .. 1829292 -  -9.8  -2.78508   CACGGTGGAAAATAT    GGCCTATTTT-GCCGT AGAG ACGGCCAAAAT-GGCC     CGCCATATGCTGGGT  63 447
 C1O47_08155 1827653 .. 1827671 -  -7.3  -3.06315   GGAATACGGGGAACA             GGCCGCC CGTGC GGCTGCC             GCCAAGGCCTGCCGG  59 69
 C1O47_08145 1825694 .. 1825724 -  -2.4  -3.53811   TTCACGGCCGCGAAA       CGATCCTGCCACGC GCA ACACGGAAGGACAG       CCCTGGGCGCGGCGA  47 62
 C1O47_08140 NONE
 C1O47_08135 NONE
         mfd 1818372 .. 1818392 -    -4  -3.84017   CAACGGTAAAGAGAA            GCAGATTT GATGG AAAGCTGC            CGGAGCGGTCTGGCG  57 145
 C1O47_08110 1814824 .. 1814842 -  -5.8  -4.36914   CCCTGGTTGAGAAAA             CCGGGACG AAC CGGGCCGG             GGAATTAGGATTGAT  72 350
 C1O47_08055 1804332 .. 1804359 -  -5.7  -5.92399   CAAGAAAACAAAAAA        CGCAAGCT-TTG ATAAA CAATAACTTGCG        GAACAAACTGGTACG 100 33
 C1O47_08020 1794222 .. 1794241 -  -4.8  -3.96337   TGAAAAAGGAGGAAA            GGCGCGTC TGTT GTCCCGCC             TCATTCTTCCGTTTT  59 192
 C1O47_08015 1792657 .. 1792670 -  -5.2  -3.05384   TTTTGTGGCAGGGAA               GCGG TGGAAC CCGC                TTCCCTGCCGGTCCG  51 132
        hisS NONE
 C1O47_07975 1783547 .. 1783574 - -15.6  -5.14563   TTCTGCATGAAAAAA        CCCCGGATGGAA TGAT TGCCATCCGGGG         TTTTGTTTGAAGATT 100 45
 C1O47_07910 1768900 .. 1768910 -  -6.8  -3.01712   GCCGCTGGCGGAACA                 GGCT GGA AGCC                 CGCGATGGAGAATAG  54 311
 C1O47_07895 NONE
 C1O47_07890 NONE
 C1O47_07885 NONE
 C1O47_07880 NONE
 C1O47_07875 1759860 .. 1759882 -   -10  -3.14344   TATTGCCGGGAGTAA           CCACTTTCTT TCA AAAAAAGTGG           TAGGCCCGGTAGGAA  68 23
 C1O47_07855 1755533 .. 1755551 -  -6.1  -3.55444   TGCTCATTCCTGAAA             CAATATC TTGTG GATATTG             CCGTTTTTAAGGGGA  59 73
 C1O47_07850 1754768 .. 1754804 -  -6.5  -3.22448   GGAAAGTCAAGCTAA    TCCCCCCTGTTTCCC GGCACGG GGGAAACAGGTTGGG    CTGAAAGGCGTATCC  58 194
        fabF 1753383 .. 1753428 - -24.9  -5.37593   TTTTAAATGAAAAAA GCGGAAGCGC-GATGGCTGCGG TGG CCGCAAACATCAGCGCTTCCGC CGGAAAGGAGAGGCC 100 49
 C1O47_07840 NONE
 C1O47_07835 1752047 .. 1752071 -  -3.6  -5.60993   TTTTGTAGAAAAAAA         GAAC-GCTTCCC TGA GGGA-GCTGCTC         AAGCCGGGCGACCGG  89 268
 C1O47_07815 1747730 .. 1747756 - -15.1  -5.14563   GCGGGGATGAAAAAA         GGCCGTTCCCC GGAGA GGGGAGCGGCC         TTGAAATATTGCCGG 100 49
 C1O47_07810 1746612 .. 1746631 -    -3  -3.50746   GGGGCAAAAAGAAAG            CAA-AAAGA GAT TCTTTATTG            ATTTTTCTCCGGAGG  49 20
 C1O47_07805 NONE
 C1O47_07800 NONE
 C1O47_07795 1744571 .. 1744592 -   -13  -5.49234   AGACTCAATAAAAAA           CGCAGGCG GCGATG CGCCTGCG            CGGTATCCGGCGATG 100 303
 C1O47_07780 NONE
 C1O47_07775 NONE
 C1O47_07770 1741353 .. 1741382 -  -7.9  -2.78505   GACAAGGGAATATTA       TTTTTCCGCGTAT GGCG ATACGCGGAGAAG        ACGTGAAATTCTTCA  54 511
 C1O47_07745 1736392 .. 1736417 - -19.1  -4.36914   TTCCGGCGGAGAAAA         CCCTTGCCGGA AGGT TCCGGCAAGGG          TTCTTATTTATGTTA 100 54
 C1O47_07740 NONE
 C1O47_07735 1734437 .. 1734457 -  -3.2  -3.65201   CAACAGGCTGAATAA           GCGTCCGCG CATC CG-GGAGGC            TGCCTTGGCGGATCC  50 394
 C1O47_07720 1731885 .. 1731930 - -15.4  -2.69545   GGCAGAGAGGAGAAG TTGAAGGGCAGGACTCCGGC GGGTGG GCCGGAGTCCTGCCCCGGCA TGTGTTTACGGCACG  83 53
 C1O47_07715 NONE
        pstA 1727731 .. 1727742 -  -2.2  -3.30338   AGAATGGGGTTAGAA                GCTGG AGG CC-GC                GTACTTTTTGCGCAG  44 8
        pstB NONE
 C1O47_07700 1726200 .. 1726210 -  -2.4  -3.18728   ATGGGCAACAGGGAA                 TCGC CGT GCGG                 GCAGGAATTGTTTTA  44 38
 C1O47_07695 NONE
        cysK NONE
 C1O47_07685 NONE
 C1O47_07680 NONE
 C1O47_07675 NONE
 C1O47_07670 NONE
 C1O47_07665 NONE
 C1O47_07660 NONE
 C1O47_07655 1716793 .. 1716805 -  -9.1  -2.98508   TTAATGAAAATATTA                TGCCG TTG CGGCA                GAGGAGGGCTGAATG  63 192
 C1O47_07600 1692598 .. 1692623 - -14.7  -2.55267   AAATAGTTCAAGCCA         GGGCCGTTCCC GGGA GGGAACGGCCT          TTTTGTTTTTGTCTG  83 101
 C1O47_07585 NONE
 C1O47_07580 NONE
 C1O47_07575 NONE
 C1O47_07570 1686409 .. 1686419 -  -5.4  -2.81786   CATACCTAATATAAT                 CCAT CAT ATGG                 CAAAAAGATGATGAA  48 160
 C1O47_07565 NONE
 C1O47_07560 NONE
 C1O47_07555 1682578 .. 1682600 -  -4.8  -2.83403   CTCCGCGGAGGAAAG           GCTCCATCCG AGG CAGATGAAGA           TGATTATATGGAGAA  45 117
 C1O47_07550 1681557 .. 1681567 -  -2.4  -4.59773   TTTGATCCTGAAAAA                 GGCC CAT GCCC                 GCATGATAGCCGGAG  65 145
 C1O47_07545 1680662 .. 1680687 -  -8.9  -3.32946   TTCCGAATCAGAAGA         GCCGTTCCGCA TTTT TGGGGGACGGC          TTTTTGAAAAATGCA  67 65
 C1O47_07535 NONE
 C1O47_07530 NONE
        trxB 1677724 .. 1677734 -  -6.8  -3.55622   GGGAAGGGCCGGAAA                 TCCC GCT GGGA                 ATTCCGGCCCGTTCC  62 52
 C1O47_07520 1676197 .. 1676212 -  -4.6  -4.89852   CCAGAGCGAGAAAAA              GGCGTG AAAG CATGCC               CGCACCCTACCTTTG  74 124
 C1O47_07515 1675466 .. 1675490 - -14.3  -4.75309   TGAAAGGCAACAAAA          CAGGCTCCCGA TTT TAGGGAGCCTG          TCTTTAAAGGAAAGA 100 55
 C1O47_07510 1674284 .. 1674310 - -12.3  -5.18355   CTTAAAAATGAAAAA         CTGTCCGGGGT GTAGA ATCCCGGACAG         TTGTTGAAAAACGGG 100 60
 C1O47_07505 1673167 .. 1673181 -  -5.7  -3.44848   GGTGTGGAGGAAACA               GGTCA GCGGT TGACC               AGCAATTCCGCGATT  57 13
 C1O47_07500 NONE
        nadC NONE
        pdxH NONE
 C1O47_07485 1669589 .. 1669601 -    -2  -3.55145   AATCATTAATGATAA                TACT TATTC AGTA                AGGAAGGGGGATACT  48 272
 C1O47_07465 1665518 .. 1665537 -  -3.5  -4.11484   GGGAACGCGCCAAAA            GGCTCGG AACATA CCAAACC             TTAAAAGAGACTTTT  59 60
 C1O47_07460 1663352 .. 1663376 -  -2.1  -3.01416   TATGATTGATAGACA          GTGTTTTTCTA TTC CAGAAAAGCCC          GCCTGCTTTACAGAA  41 33
 C1O47_07455 1662992 .. 1663002 -  -2.4  -3.14132   TGGCGGCTGGATTAA                 CGGC CGT GCTG                 GATGGTGTGGCGCTT  42 11
        rnpA NONE
 C1O47_07445 NONE
 C1O47_07440 1660197 .. 1660224 - -18.5  -4.32436   ATATGACGAGGAAAA        CCGGCCCTCTC TATCAG GAGAGGGCCGG         TTTTTTGCAGGATTT 100 168
 C1O47_07430 1652499 .. 1652513 -    -7  -3.33696   CGCCGGGGGAATTAA               GTGCCC GCG GGGCTC               CGGAGGAAAGTTTTT  58 204
        carB NONE
 C1O47_07420 1647986 .. 1648024 -  -6.8  -4.98352   ATGAAATAAAAGAAA  CCTCT-CCCGGAGCCGCA ATTCA TG-GGCTCCGGGCATAGA  TAATGCATTTTTCCC  86 88
         gmd NONE
 C1O47_07410 1645776 .. 1645788 -  -5.5  -4.08216   GGATCTGGCCGAAAA                GTCAG TTG CCGAC                GGCTTCCATCCGGCT  63 14
 C1O47_07405 1644393 .. 1644403 -  -2.4  -2.91061   CGGTAACAAAAAAGG                 CGCC CTT GCCG                 TCCTTTCTCCGTATG  41 47
 C1O47_07400 1643015 .. 1643038 - -16.8  -4.41494   GACGGGCAAGCAAAA          TGCCCACAGG GTTT CCTGTGGGCA           TGGAGAGAGGAAGAC 100 54
 C1O47_07395 1641999 .. 1642017 -  -3.8  -2.80589   GAAAAAGTGTGAAAG             CTTCAGCA TTG TGCCGAAT             TCTTCGCTCTTTTTG  44 55
 C1O47_07390 1640970 .. 1640980 -  -2.4  -3.93166   TTTTCAAAAAAGGAA                 GCCG GTA CGGG                 GCTTTAAACAAGGAA  53 213
 C1O47_07350 1631762 .. 1631785 - -12.4  -4.07568   TTCTTTCTCGGAAAA          GGAGCGCTCC CTGT GGAGTGCTCC           TTTTTTGTTGCAGAA  90 185
 C1O47_07335 1630067 .. 1630090 -   -11  -5.15969   CTTTAAGCTAAAAAA          CCTTCTCCTG CAAG CCGGAGAAGG           TTTTTATAAAAGGAG 100 56
 C1O47_07330 NONE
 C1O47_07325 1627678 .. 1627688 -  -6.8  -4.07687   ACGTGGGCTTTAAAA                 CCCA CCG TGGG                 TTCGAATCCCACTCT  69 131
 C1O47_07305 NONE
 C1O47_07300 1622864 .. 1622874 -  -4.6  -2.69545   GTGACAGATTAGAAG                 CCCA TGC CGGG                 AGGGAGACCCAAGCC  44 8
 C1O47_07295 1621775 .. 1621785 -  -8.2  -3.21099   TTTCCTGAGGAGGAA                 CGGC GTT GCCG                 TGCTGTAAGGGGTAT  64 44
 C1O47_07275 1616134 .. 1616170 -  -7.4  -4.26188   GGCACATAGCCAAAA   TTCCGTCCTCAGAAAAC TCCT GCTTCCCGAAG-CGGAA    TGGTCAGCCTACACA  74 196
 C1O47_07270 1615445 .. 1615476 - -18.8  -5.00616   CCCTCGCCGAAAAAA      GGAAGAAGGGGGGG ATTT CCCCCCTTTCTTCC       TTGAAAGATGGCATG 100 51
 C1O47_07230 1606040 .. 1606059 -  -3.6  -3.40878   ATGAGGCGAAGAAGA            CGCATT CTCCTTTT AATGCG             TTCTTGTCCTGGGTG  50 18
        aroB 1604655 .. 1604670 -  -4.7  -4.86385   AGCCGTAAAAATAAA              TTCCC CGTGCC GGGAA               TTGGGTAATTACTAC  74 219
 C1O47_07215 NONE
 C1O47_07210 1601835 .. 1601845 -  -2.4  -4.43879   ATCATTTAATGAAAA                 GCCC TTT GGTC                 TTTTTATGACGCAGC  62 100
 C1O47_07205 1598585 .. 1598635 -  -2.5  -3.73756   CAGCTTATCAAAAGA CCTTTGACTGGTAAGGCCGCCTCC TGAA GAAGGCGGCCTTATTTTTTAA-GG AAGGGCCGTTTTTTA  50 62
 C1O47_07180 1593058 .. 1593084 - -19.5  -4.67982   TGCTATGGAATAAAA         GAGGCCGCCCT GTCAA AGGGCGGCCTC         TGCCTTAAGAGTTTT 100 61
 C1O47_07175 1592037 .. 1592063 - -10.2   -5.4505   TGGCGCAATAAAAAA         GCCGTTCCCT GGGAAGA AAGGAACGGC         TGGCATTAAAGGAGG 100 50
 C1O47_07155 1588529 .. 1588561 - -19.9  -4.86033   AAAGGGTGACAAAAA      GAGGCCCGGTCCCCA AGG TGGGAACCGGGCCTG      CCGGAAAAGGGATGC 100 48
 C1O47_07150 1587427 .. 1587438 -  -5.8  -3.54741   CAGGACCCGTTCAAA                GCAG GCGC CTGC                 TTCTGAAGTAAACCA  59 9
        argB NONE
 C1O47_07140 1585768 .. 1585782 -  -4.2  -4.09864   ATGCAGGCGGGAAAA               CTGTCT GCT AGACGG               GACCCATGATGAATT  61 332
 C1O47_07130 NONE
 C1O47_07125 NONE
 C1O47_07120 NONE
 C1O47_07100 1577350 .. 1577360 -  -2.4  -3.05647   TGGTAAGCATAGACA                 GGCG TTG CTCC                 TTTACTCTAATCCAT  42 32
 C1O47_07095 1576623 .. 1576639 -  -2.9  -2.72461   GAATGGGGGTTAAAG              GAAGGTC AGA GAGCTCC              GAAACGGCGTTTTCT  41 14
 C1O47_07090 NONE
 C1O47_07085 1574780 .. 1574804 -  -3.4  -3.40403   GGCCGCCTATGACAA         GCTGGCGAGCC TGAT GGCG-GCCGGC          AGGTTGAAGCAGGCC  48 335
 C1O47_07075 1573544 .. 1573564 -  -4.6  -3.77607   AACAACCGGACGAAA            GCCCTGGA ATTTA TCCTGGAC            TGTACGGAAGCATGC  56 15
 C1O47_07070 1573070 .. 1573084 -  -4.2  -4.64334   AATGTTTCAATAAAA               CCTTCA ACT TGGAGG               TGCCTCACTTAAGCA  70 143
 C1O47_07065 1572699 .. 1572728 - -19.4  -5.07486   TATTTGTAATAAAAA       GAACCGCTCCGG GAATCT CCGGAGCGGTTC        TTATAAAAGAGATTG 100 75
 C1O47_07040 NONE
 C1O47_07035 1565745 .. 1565758 -  -6.7  -3.25823   GGCCGGTGATATGAA               GTACC TGCT GGTAC                CGGACCGCGCTCCGC  56 356
 C1O47_06985 NONE
 C1O47_06965 NONE
 C1O47_06960 NONE
 C1O47_06955 NONE
 C1O47_06950 1547120 .. 1547138 -    -6  -2.94045   GGAGGGCAAGAACTA             TTCCCG TTCCCTG CGGGAA             TTTCCCGGTTTCTGG  52 4
 C1O47_06945 NONE
 C1O47_06940 NONE
 C1O47_06935 1541786 .. 1541819 -  -8.7  -3.31196   GGAAATGGACAGGAA     CACGGC-GGCCGGGGG GCT CGTCCGGCCCGCGGTG     GAGATGCCGTGTGGT  65 86
 C1O47_06920 NONE
 C1O47_06915 1538490 .. 1538501 -  -3.6  -2.82602   CAGCAAAGGCAAGTA                GGGC ATTA ACCC                 GATTTGTTTGCCGGG  44 250
 C1O47_06880 1531565 .. 1531578 -  -4.5  -2.78816   GCAGTTTCCATTATA               GCCTCC CCG GG-GGC               GTTTTCCGTTACCAT  45 34
 C1O47_06830 1520658 .. 1520679 -    -3  -4.17491   ATGAAAGCGCCAAAA           CCGT-GGTG GAATG CACCTACGA           CTACATGGGCAGGCG  58 295
 C1O47_06740 NONE
 C1O47_06735 1495906 .. 1495940 - -16.6  -3.72576   TTCGGGCGCACCAAA     CAAGGCCCTGCAAG TTAACTG CTTGCAGGGCCTTA     CTGGTTTTATGATGT 100 450
 C1O47_06720 1493800 .. 1493813 -  -5.2  -3.16088   ACATGTCATGAAAAT               GGGG GTAATG CCCC                GGGTCAGCTGAGCGG  51 29
 C1O47_06715 1492034 .. 1492051 -  -4.1  -4.49311   AGCAGCAGGAGAAAA             CTTCTTC TCCG GAAGAGG              AACGGGATTCCGAAG  66 316
        galE 1487594 .. 1487620 - -14.5  -4.63993   AATTTGAAAAAACAA         GCCCTGCCATG GAGGG CATGGCAGGAC         GGAAAAGAGGGTGGC 100 59
 C1O47_06685 1485614 .. 1485639 -  -7.7   -4.7629   GCATCAAGGCAAAAA         CTCCCGCATTTC TGA AAAATG-GGGAG         AATTGCCCTGTACAG  85 115
 C1O47_06680 NONE
 C1O47_06675 NONE
 C1O47_06670 1481999 .. 1482009 -  -2.4   -4.0825   GTCTTAAGGAAAGAA                 GGGC TGC GCTC                 TCATTTCTTTTCCAT  55 26
 C1O47_06660 1477964 .. 1478011 - -10.5  -2.68886   TGAAGGAATAAGGTA CCCGCAAGGTGCGGAGGCCG TGATTGTGG CGGCCTCCGC-CCGCGCACG GAAAATGCGTTCAGG  68 36
 C1O47_06645 1473321 .. 1473335 -  -4.2  -5.15969   CCGGAATTGAAAAAA               TTTCCG GTC CGGGAA               CTGACGCCGGAGCAT  81 417
 C1O47_06635 NONE
 C1O47_06630 NONE
 C1O47_06625 1466259 .. 1466277 -  -3.1  -2.70354   GCCGTTAGAAATGCA             TGAAGGA TCAGT TCCCCCA             GAACATATAAATATA  40 14
 C1O47_06620 1465645 .. 1465675 - -15.5  -3.28323   AAAAATCTGATAAGA       GACACCCGGCAAG TGTAG CTTACCGGGTGCC       CAAAAGAATCTCTAT  95 169
 C1O47_06615 1463615 .. 1463627 -  -7.7  -2.60496   GCCGTGCCGAAATAG                CCAAG GCT CTTGG                AGTCCAAACCACCGT  53 454
 C1O47_06605 1462639 .. 1462662 -   -11   -3.0782   TAAGTTCTGAATATA          CCCCCTTCCC CGAA AGGAAGGAGG           TCAGTTAATTCACCG  74 50
 C1O47_06600 NONE
 C1O47_06595 1460654 .. 1460668 -  -2.2  -4.13767   TTTCGTATTCTAAAA               TTTTAA TAA TCAAAA               TCGAATTCTCTTTGA  57 13
 C1O47_06590 1458524 .. 1458561 - -19.5  -3.40597   TCTGGCATCCAAACA   CAAATAGGCCTGCAATT ATTT AATTGCAGGCCTATTTA    AATTTATTAAATCAT 100 70
 C1O47_06585 1456397 .. 1456427 - -17.2  -4.46072   TCTAATAAATAGAAA       GAGTGAAAGTAATT GCA AATTACTTTCACTC       TTAGTATTCAGACTA 100 107
 C1O47_06575 1455346 .. 1455385 -  -2.7  -3.91911   CTTATCCCAACCAAA  TTTCAGCCGCCTTCCTCC TTAAT GG-GGATCGCGGCTGATC  CACCTGCCGTCGCGC  54 4
 C1O47_06565 1452708 .. 1452733 -  -2.5   -3.1247   ATGGCCGACATGGAA         CCGGAGTGTTAA GCC TTTTC-CTCCGG         GATGCGGCGTCCCGG  42 8
 C1O47_06560 1451374 .. 1451390 -  -2.3  -4.61873   TTCCAGAAAGGAAAA              TTTGC GCAACAA GCAAA              CCTTCTATTTAAAGG  65 61
 C1O47_06530 1444346 .. 1444356 -  -8.2  -2.74192   TATTTGCGAAGAGTA                 CCGG GAG CCGG                 ATTCCCCCTTCTCCA  57 195
 C1O47_06515 NONE
 C1O47_06510 1439213 .. 1439227 -   -10  -2.82516   TCTTGCAGGAGGAGA               TCAGGG AAT CCCTGA               ATGTTTTCAGTTCAT  65 383
 C1O47_06500 NONE
 C1O47_06495 1434704 .. 1434736 - -26.5  -4.03234   CTTCTGGGATATAAA      GAGCGGGTGAAAGGG TTA CCCTTTCACCCGCTC      CAATATGGACGTTAT 100 50
         rho 1432588 .. 1432614 - -13.7  -5.61596   ATCCTGATAAAAAAA         CCTCCGTGCCG GCGGG CGGAACGGAGG         ACGGGGGAAAAACAG 100 56
 C1O47_06475 NONE
        lipA 1427800 .. 1427810 -  -2.6  -3.56985   GATAAAAAATCAAGA                 TTTA TTC TAAA                 GTTCGCCAGCCTTTC  47 21
 C1O47_06465 1426306 .. 1426335 - -22.3  -5.22039   GGGAAATGCAAAAAA       GCCGCGCCAATGA ATGT TCATTGGCGCGGC        TGGAAAAAGAGCTTT 100 50
 C1O47_06460 NONE
 C1O47_06455 NONE
        feoB 1423234 .. 1423245 -    -3  -2.78463   AGGGTGGCGATGATA                TATG TTCC CATA                 TTGTTCAGTAGAGTT  41 59
 C1O47_06445 1422999 .. 1423033 - -14.5  -3.40403   GGCGCCGTAGCAGAA     GAACCTGCAAACC GCAGAAAAT GGTTTGCAGGTTC     TGAATGGGATAACCG  88 51
 C1O47_06425 1419880 .. 1419911 - -15.9  -5.34655   TAAGGAAAAAGAAAA      GGGGGAAACGCCC TTCTCC GTGCGTTTCCCCC       GTTGGGGGCGGTCCA 100 99
 C1O47_06420 1417286 .. 1417301 -    -4  -3.78234   AGTTAAACCTAATAA              GCATCA ATCA TGATAC               ATGAAAAATTTTCCA  55 459
 C1O47_06410 1416841 .. 1416854 -  -2.3  -2.66316   GCCCGGAGGATATGA               TGGCC CGGA GGCAA                TTCTCCGCTGATTAA  39 109
 C1O47_06395 NONE
 C1O47_06390 NONE
 C1O47_06385 NONE
 C1O47_06380 NONE
 C1O47_06375 1410054 .. 1410064 -  -6.8  -3.67597   GCGGCCATGGAAGAA                 GAGG CTC CCTC                 CCCGTTACCGGAAGA  60 239
 C1O47_06365 1406591 .. 1406609 - -13.1  -5.83211   GACGAAAATAAAAAA             GCGCCGG AAAAA CCGGCGC             TTGGAAAAGTGGTTT 100 53
 C1O47_06345 1401332 .. 1401352 -  -8.9  -2.52516   TGCTGGATGAGGAAG            TGGCGCGGC TGC ACCTCGCCA            AGATAGGGTGCAAGC  58 264
 C1O47_06330 1397861 .. 1397874 -  -3.8  -3.28188   AGGAAAATGGATTAA               GACG GCTGTA CGTC                ACGGTTTCCAGGCGG  48 24
 C1O47_06320 1396833 .. 1396844 -  -2.2  -4.56914   CCACGGAAAGGAAAA                TCAC TACT GCGA                 ATAGCATAGACGGTT  62 46
 C1O47_06315 1396164 .. 1396178 -  -5.6  -2.71712   TTTTTTCTCCCAAAG               GCCGGT TTG ACCGGA               AAAATGCGCTTCATC  48 54
 C1O47_06310 NONE
 C1O47_06305 NONE
 C1O47_06300 1392980 .. 1393009 -  -2.8  -5.18866   CGGAAACAAATAAAA       GCGGC-CGCCG TATTAAAGG CAGCGTACCGC       AGGAAACGCCCTTAA  76 62
 C1O47_06295 NONE
 C1O47_06290 NONE
 C1O47_06285 1386867 .. 1386900 - -16.8  -4.56597   CTGTTGCTGTAAAAA     GCGGAACCGGGG CTCATCCTCT CCCCGGTTCCGC      CGCCGGAGTCCTGAA 100 45
 C1O47_06280 1385761 .. 1385772 -  -7.2  -3.06796   GCTTACCGGATGTAA                CCGG GCTG CCGG                 TGTTAATCCTTATTT  57 414
         tig 1378936 .. 1378970 - -12.9  -4.35581   CCAAAAGATGCAAAA    CGGGGGAGTCGG-GCA TGTG TGCGCCAACTCCCCCT     GGTAAGGTGTTTTGT 100 53
 C1O47_06245 NONE
 C1O47_06240 NONE
        tsaD 1375540 .. 1375566 -  -9.4  -3.63305   TAGAGAAGTCGTAAA         TCCGCCCAAACC TGC GGTTCTAGCGGA         TAAATAGCATCCTCC  70 162
 C1O47_06230 NONE
         tuf 1374125 .. 1374152 - -17.1  -3.53012   TTCTTTCGTGGGAAA        TGAGGGGGCCT GCGGGG AGGCCCCCTCA         TTAAACCTGATGTAG 100 66
 C1O47_06220 NONE
 C1O47_06215 NONE
        nusG NONE
        rplK NONE
 C1O47_06200 NONE
        rplJ 1371270 .. 1371280 -  -6.8  -3.02144   CGAGTCGCGCCAAGA                 GCCA ACT TGGC                 ATTTCAGTTCTCCGG  54 135
 C1O47_06190 1370806 .. 1370842 - -23.3  -3.27923   TGTGAAGACGAGGAA    GCGCAACAGGAGAAAAA CGG CTTTTCTCCTGTTGCGC    GGGAAGTAAAAAGCT 100 40
        rpoB NONE
        rpoC 1362394 .. 1362421 - -18.4  -5.48787   AGAAGACATAAAAAA        GACCGCCCCCCG GAAA CGGGGAGCGGCC         CTTGAAGTGTGGGTG 100 52
 C1O47_06175 1356420 .. 1356459 - -24.6  -5.38054   TCCGATAAACAAAAA  CT-CAGAGCCGTTCCGGAA TTA TTCCGGAACGGCTCTGGAG  GGCCAGGAGGAAGGC 100 86
        lepA 1352464 .. 1352492 -  -4.7  -4.10007   AGAACCCCGGGAAAA       CAGTCTCTCCAT GTTCAA ACGGAGA-ACTG        ATATAAAACCGGGAG  61 87
 C1O47_06150 1352222 .. 1352249 -  -3.4  -2.84265   TAACAGGAAAAAATG        CGCAACCG-GGAA TTG TTCAACGACTGCG        GCGGTTTCAGTGTTT  41 32
 C1O47_06145 1351173 .. 1351191 -  -6.7  -4.25458   AAGCCCATGAATAAA            CCGTTCCG CAGC CGGA-CGG             CAGGGGAAAAGCCGT  71 41
 C1O47_06140 NONE
 C1O47_06135 1347491 .. 1347522 - -14.5  -4.66535   AAGCGGGAAAAGAAA     GCCGGGGATCCGCGG TTGT CCGC-G-TCCCCGGC      TTTGAAGAAATCAGA 100 64
 C1O47_06130 NONE
 C1O47_06125 1345443 .. 1345455 -  -6.9  -3.48024   TTCCAGCAGGAAATA                CAGGG TAA CCCCG                GTCAATCCCGCTCCG  60 257
 C1O47_06115 NONE
 C1O47_06110 NONE
 C1O47_06105 NONE
 C1O47_06100 1339379 .. 1339392 -  -3.8  -4.09739   GCAATGCCTGCAAAA               TGGC TGTTTT GCCA                GCTTCATTAGGTCCG  59 192
 C1O47_06090 NONE
 C1O47_06050 1328704 .. 1328739 -  -4.6  -4.65895   TTTTCCAGGGAAAAA    CCGCAGTGAGGGCACAA TGA TTCCGCCC-CACGGTGG    AAATTATGTAAACAC  70 124
 C1O47_06045 NONE
 C1O47_06040 NONE
 C1O47_06035 1326102 .. 1326122 -  -2.5   -5.1356   TTCTATGAAGAAAAA            CACCGGA AGATGGG TCCGGTT            TCTTGCCGGCGTCAT  74 37
 C1O47_06030 1325589 .. 1325617 -  -8.9  -3.42257   GGGGAAAGATAGGAA       GGCCCCCGATCT GTCTGG AGA-CGGGAGCC        GCGCCTGGCGTCCGG  69 67
 C1O47_06025 NONE
 C1O47_06020 NONE
 C1O47_06015 1323537 .. 1323555 -  -5.2  -4.16279   CAGACGACGGGAAAA             CCATCCGT GTG AGGGACGG             CATTCAAGCGCTTGA  64 251
 C1O47_05965 NONE
 C1O47_05960 NONE
 C1O47_05955 1309300 .. 1309315 -  -7.5  -2.71712   TTCCTGGCTGGAAAG              GGCGG AATTTG CCGCC               AGAGCCAGCACGCAC  56 97
 C1O47_05945 1306829 .. 1306850 -  -2.9  -3.05844   GGCTGGATGCCAAGA           TGACGGAAC AGCC GTGCGGTCA            GGGTCAGAGGTCCGT  43 178
        raiA 1305303 .. 1305334 -   -13  -4.57353   CGGCATTACAGAAAA      GAGCAGGACCCCCG GTTT CTGAAGTCCTGCTC       TTTTTGATGCGTTAT 100 75
 C1O47_05920 1302321 .. 1302355 -  -2.9  -4.93661   AGAGGAACAAGAAAA    GCCTTCATCCTG-TTC TTTT GAGGCAGGATGAAATC     CACGGCAAGGAAAAA  73 62
 C1O47_05910 1301699 .. 1301711 -  -4.8  -2.89602   CTGCCCACAGTAAAC                CCGT TTTTC ACGG                TTCCGGCAAGCTTGA  47 125
        fabG 1300597 .. 1300613 - -10.1  -3.06302   ACCATGCGCAGGGAA              GCTCCCG CCG CGGGAAC              CGTTTCCGTGTAGGA  68 348
 C1O47_05895 1299428 .. 1299445 -  -6.3  -2.77344   GTATTCCGGAAGAAC             GGCAATGG GCC CCAT-GCC             CAGCACTTCATATTC  51 390
 C1O47_05880 1297103 .. 1297130 - -18.5  -4.50661   AACGGATAAGGAAAA        GGCCGGCTCAC GATTTT GTGAGCCGGCC         TTTGAATATAGGGAG 100 56
 C1O47_05875 1296409 .. 1296446 -  -5.8  -4.07568   TCTTCTCCTGGAAAA  TCCGGAGACATTCATGGGA CAG TCCC-CGAA-GT-TCCGGA  AAGTGTCGTCCCGCT  66 76
 C1O47_05855 1294317 .. 1294327 -  -3.2  -3.44319   CGGAACCTACCACAA                 GCAC CGT GTAC                 TTGCGCTTGTTGTTC  47 169
 C1O47_05845 1291626 .. 1291651 - -14.7  -5.68023   TGATAATGAAAAAAA         CTCCCGACAGC CGAT GCCGCCGGGAG          TTTTTACAGAGCGTC 100 58
 C1O47_05805 NONE
 C1O47_05800 1278626 .. 1278652 -  -5.9  -4.10925   AGACATGGTTGAAAA        GAGGCTGGCA AAACGCCA TGCC-GCCTC         TTATTCCTCTTCCAG  66 26
 C1O47_05775 NONE
 C1O47_05770 1272246 .. 1272284 - -22.7  -3.53012   TCCCTTTCCCGTAAA  TGCAGGAAGCCGGCCTTT CTTC AAAGGCCGGCTTCC-GCA   TGGTAAAATGGTTAT 100 37
 C1O47_05745 1266691 .. 1266701 -  -8.2  -2.72043   AAGGCGGCGGGAAAT                 GCCC CCC GGGC                 GCTGGTGGTCCGTGC  59 64
 C1O47_05730 1262971 .. 1262987 -  -5.1  -3.62046   CCATGCGCGGAATAA              CCTCC GCATGAT GGAGG              AACTGCGGCGCGCCG  56 350
 C1O47_05715 1260321 .. 1260331 -  -2.4  -3.49475   GTTATTGGGAGATAA                 GGTC CCG GGCC                 TTGTCCAGAATTTGG  46 1
 C1O47_05710 1258137 .. 1258191 - -16.5  -2.99849   GAATAAGGGAAAGGA CAGGGACGGAGGTTTCCTGGACGCCC GGAG GAGCGTGCAAGGAGC-TCCGTCCCTG TTGGATGATTTTTGT  95 47
        rbfA 1257457 .. 1257472 -  -4.6  -4.07568   GTCGCGCTGGGAAAA              GGCTCT CCGG AGCGCC               GGTTTCTGAGATTAA  61 139
 C1O47_05685 1252290 .. 1252307 -  -5.6  -4.35524   CCGCTAAACGGAAAA             GGTTGA TACCAT TCAACC              TTCCCCAGTTATGAA  69 20
 C1O47_05680 NONE
 C1O47_05675 1249551 .. 1249570 -  -4.9  -2.90496   GGCGGCGGCAAATCA            CGGAGGC GAGAAT GCCCCCA             GCACCGTTCCCCCGC  47 3
 C1O47_05670 1249087 .. 1249103 - -13.7  -3.32844   GCCCTGACGGGAGAA              TGGCGCG GGG CGCGCCA              ATGCGGGAAGGTTTT  83 90
        nagA 1247079 .. 1247117 - -17.5   -3.4158   GGTAAAAAGGAGGAA  GGCGCGCCGGAAGG-G-CG GGA CGTCTCCTTCCGGCGCGCG  GAAACGCGGTTACGC 100 35
 C1O47_05655 NONE
 C1O47_05650 NONE
 C1O47_05645 1245301 .. 1245317 -  -7.9  -4.30014   CTGATGAAGTGAAAA              GGAGGAG ATT CCCCCCC              TTTCCCTGCTGTTCC  76 85
 C1O47_05635 1243961 .. 1243971 -    -4    -4.254   TGAATACTTAATAAA                 TTCA TAC TGAA                 AAGCAATATCAAAAA  61 34
 C1O47_05630 NONE
 C1O47_05625 NONE
 C1O47_05620 NONE
 C1O47_05615 NONE
 C1O47_05610 1237980 .. 1237993 -  -3.8  -3.64703   GGCCGGGGAGGGAAA               GAGC ATGGAG GCTC                CGTTCAGGCCGGAAA  52 169
 C1O47_05605 NONE
 C1O47_05600 1236741 .. 1236780 - -15.1  -3.01712   GGTCCTCCGGGAACA GCCTCCGGAGTACG-CCGG TTTT CCGGCCGT-CTGCGGAGGC  TGCCCATGTTTCCCG  86 58
 C1O47_05525 NONE
 C1O47_05520 NONE
 C1O47_05515 NONE
 C1O47_05510 NONE
 C1O47_05505 NONE
 C1O47_05500 1218768 .. 1218801 -  -8.7  -2.55213   GATCCAGGGAACGGA     GGGCACGCTGGCTGG TTTC CCAACCCGCGTGGCG      GGTGAAAAGCTGGGC  58 441
 C1O47_05490 1216542 .. 1216561 -  -7.2  -2.80821   CCTTCAAAGACATCA            TCTCCTTC TGGC GAAAGAGA             GCAGAATGGAGATCA  56 3
         ffs 1216394 .. 1216408 -  -3.4   -2.8919   AGAGCCATAAAATAC               CGCCGG GAA CAGACG               CGGCAAACACGAACA  42 10
 C1O47_05480 NONE
 C1O47_05475 1212277 .. 1212322 -  -9.8  -3.69437   GAATTCCAAAATGAA GAGCAAAACCAGCAAAGCTT TTCAAC AGGCGTTGCTGGTTTTGACC GGCAAGGAAAAAACT  72 282
 C1O47_05450 1205219 .. 1205245 -   -18  -4.56597   GGCTTCCGGGAAAAA         GGTCCGCTCCAG ACC CGGGAGCGGACC         TTGGCATTCAGCATT 100 244
 C1O47_05445 1204461 .. 1204473 -  -4.7  -3.54129   GACATCCGTTTCAAA                GGCTG GGC CCGCC                CGGGCAAGGAAGGAT  52 391
 C1O47_05435 NONE
 C1O47_05430 1201533 .. 1201546 -  -3.8  -3.61398   GGCGCGGGGGAAGAA               GGAG GATTTT CTCC                GCCTGCTGGAAATGT  52 375
 C1O47_05420 1199673 .. 1199701 - -11.7  -4.08692   GAAGGTTTGGGAAAA        GCCTCCCGGAAAA TCA TATTCCGGGAGGG        GCGGGTATTGGGACG  90 45
 C1O47_05410 1196602 .. 1196614 -  -4.1  -3.34398   GGTCCGTGGTAAATA                CGCTT CAT AAACG                CTGTATGGAGTCGCC  50 161
 C1O47_05405 1195450 .. 1195464 -  -3.5  -3.44792   AAGATTAATGGAGAA               GAAGG ATTGG CCTCC               CCTGCTTTTTCTCCG  50 43
 C1O47_05400 1195111 .. 1195129 - -14.6  -2.55999   CGATTGTACAGTAAT             GCCCGGAA AAT TTCCGGGC             GCTTTTCCGGAAGAA  81 57
        acnA 1191444 .. 1191482 - -12.3  -2.78384   CCGGTGCGGATGAGA   CGGACGGGGCCGCGCCT TCGGG AGGAAGGGGCCCGTCCG   CGAGGGGAAGCCGTA  74 66
 C1O47_05385 1190355 .. 1190375 -  -2.4  -3.94188   ATTCAGGTCAAATAA            CCTGTTCC GGGGT GGTTCAGG            AGGCATCAAAAGCTT  53 317
 C1O47_05380 NONE
 C1O47_05375 1188411 .. 1188447 -    -3  -4.05446   GGCTTGAAGGAGAAA   GGCCGT-TACTACCA TGTGGCGC TGGCTGCAGACGGCC    TGCCCGTGTATTATC  58 432
 C1O47_05360 1184001 .. 1184034 -  -8.7    -4.323   GGCAAATAGGGAAAA     CGGCGCGG-ACGGCGT GAA ACGCCGGGCCGGGCAG     ATGGGAAATACAAGG  83 54
 C1O47_05350 1181868 .. 1181886 -  -3.8  -4.58685   AAATGTGCGGAAAAA             CGGAGAAT TCA ATCATCCG             TTTTTTGGGAGAGGA  66 15
 C1O47_05345 1180796 .. 1180841 - -16.9  -3.59262   GTCTACAGCCGGAAA CAG-GCGCCGCCCTGCCAGG TAAAAAC CCTGGCAGGGCGGCGTTCTT CCTTTTCGGAATATC 100 187
 C1O47_05320 NONE
 C1O47_05315 1171184 .. 1171202 -  -5.2  -3.14211   AGCCCGCGCCAGCAA             CATGGCCT TGA AAGCCCTG             ACGGCATTTTCCTTT  51 82
 C1O47_05310 NONE
 C1O47_05305 NONE
 C1O47_05300 NONE
 C1O47_05295 1166605 .. 1166619 -  -7.1  -3.59867   GAAAAAATGAAGGAA               GGCAG GCAGG CTGCC               AGGGACGCCTATGAA  60 472
        recN 1161459 .. 1161477 -  -4.4  -4.25104   TCGTGCTGATGAAAA             GCAACCCC GCA GGCGTGGC             GGAAGCTGTCCAGCT  65 294
        mscL 1155157 .. 1155184 - -17.8  -5.32699   GTAAAGAGGAAAAAA        CATGCCGGTCCC GCAT GGAACCGGCATG         AACCGTTCAAAAGAA 100 42
 C1O47_05225 1153866 .. 1153876 -  -8.2  -3.14051   TGATCTGGATGAATA                 CGGG CGG CCCG                 CAAGCGGTGTTCCTG  60 115
 C1O47_05215 1150945 .. 1150965 -    -9  -2.59564   TGGCTAGCCCATAAT           GCGGCCTCC GGAA GGAGGC-GC            CGCAGGACCCCGTCT  61 48
 C1O47_05210 1149685 .. 1149721 - -15.8  -4.12902   GAAGGAGGCTGAAAA   CAGGCAGGCCGCCTCCG TTTC CGGTG-CGGCCTGCCGG    GTAGTGATGAATGAA 100 53
 C1O47_05200 1148252 .. 1148264 -  -4.8  -3.53012   CCTCCGGTGCTCAAA                CGGA ATTTA TCCG                ATGACGAGGAATTTT  54 19
 C1O47_05195 NONE
 C1O47_05190 NONE
 C1O47_05180 NONE
 C1O47_05175 NONE
 C1O47_05170 1140132 .. 1140156 -  -7.8  -2.59068   CAAAATCCAGAAGAG          CGCCGCCATG ACGAA CATGGCGATG          ACGCGGATTTCAATA  55 223
 C1O47_05160 NONE
 C1O47_05155 NONE
 C1O47_05150 1134743 .. 1134775 - -17.9  -4.35461   GCAAGATGATGAAAA      CGGGGTTCCATTC GGAAAAA GAATGGAACCCCG      TGCTGAAGCGGTAAA 100 82
 C1O47_05145 1132746 .. 1132760 -  -4.2  -3.41936   CAGGAAGCTGAAAGA               GCAAAG GAT CATTGC               CGCGATATATGGCCA  52 158
 C1O47_05140 NONE
 C1O47_05135 1131650 .. 1131662 -  -3.3  -4.57073   CATCCGCTGGAAAAA                GGCCT TCC AGTCC                GTCTGCCTGGAGGTG  67 232
 C1O47_05120 1127164 .. 1127177 -  -2.3  -3.95852   ATTTTATCAATGAAA               CGGAT TTGG AACCG                ATTCGAGATAAGACT  54 382
 C1O47_05090 NONE
 C1O47_05085 NONE
 C1O47_05080 1116737 .. 1116769 -  -9.7  -2.57274   CTGGAGAAGGAATAT      CCCGGAATCCGGAAC TGG GGCGCGGAGTCCGGG      GAATGTACCGTCCGG  62 408
 C1O47_05060 1110787 .. 1110809 -  -3.4  -3.07994   CCGAAGCGGATGCAA           GCTTTTTCTC CGG GAGAAAGACC           GGAGTTCAATCAGTA  44 62
 C1O47_05055 1109339 .. 1109367 - -10.2  -4.93365   CCGGAGAATGAAAAA       GCCCCGCACCGCC TAGC GGCGGC-CGGGGG        TTGGCGTTGCTTGAT 100 60
 C1O47_05050 1107650 .. 1107670 -    -9  -2.74144   TTTTGATTCCGAAAG            CTCCGGAA CCCGT TCCCGGAG            GAGAAGACGCACTGG  62 91
        argH NONE
 C1O47_05030 1103484 .. 1103504 -  -5.3  -3.24423   CCCAATAAGAGTTAA            CAGGCCGTA TTG TGCCGCCTG            ATTCCCGGAGATGAG  53 193
 C1O47_04975 1092136 .. 1092167 - -12.2  -4.40561   TTGCCGGAAAAACAA      TGAAGGGCGTCCCC TGAG AGGGCCGCCCTTCT       GATATAAAGATTCCC  95 96
 C1O47_04965 NONE
 C1O47_04960 1087197 .. 1087218 -  -4.3  -4.36914   GTCTGCCGGAGAAAA           CGCCTGTCC CTGC GGACATGCT            TTTTGCTTCCGGCAG  68 516
 C1O47_04925 NONE
 C1O47_04920 1076475 .. 1076503 - -14.6  -5.55769   TGGCAGAACAAAAAA        CCACTGTACGGG AAATA CCCGTACAGGGG        TTTGATGAAAAGGGA 100 46
 C1O47_04905 NONE
 C1O47_04900 1069767 .. 1069803 - -10.7  -3.04144   GCCGGAGTGGGAACA    GGACACCCACCCCATGA GCA CCACGGGGAAGGCGGCC    AGAACAAGGAGAGGC  71 75
 C1O47_04895 1068849 .. 1068892 - -16.9  -5.63517   CCGGGAAACAAAAAA TGCCGGATAAGGTGATTGG TTTTAC CCAGTCATCTTATCCGGCA TTTTTATTTGCCCTC 100 225
 C1O47_04890 1067287 .. 1067297 -    -4  -4.82901   GTTTTCCCAGAAAAA                 CTTT GTT AAAG                 AAATATCTTTTGTTT  72 151
 C1O47_04885 1066089 .. 1066099 -  -3.2  -2.97109   CGAAGTCAATGAAAC                 GTCA AAC CGAC                 CATGGAATAATAAGT  42 96
 C1O47_04880 1065356 .. 1065381 - -13.3  -3.35197   GTTCATACAGAGGAA         CAGGCGTCGTG GAGA CATGACGCCTG          TTTTTTTATTGGCTG  84 271
        ribD NONE
 C1O47_04855 1057357 .. 1057372 -    -9  -2.52464   GTTTTTCCTAACGGA              GGTTCC GGCA GGAACC               GCTCAGGCCGGATCA  61 38
 C1O47_04850 1056732 .. 1056754 - -14.2  -5.70829   AAGATGAGAAAAAAA           CCCTGCAAGA ACG TCCTGCAGGG           TTGAAGAAGAAAACC 100 52
        hrpA 1052974 .. 1052991 -    -4  -4.85599   TCCATTTCAGAAAAA             GGCGCC GGATAA GCCGCC              TGTGCAAACAGCCTC  72 51
 C1O47_04825 1049370 .. 1049380 -  -2.4  -5.07652   TCTCTCAAAAGAAAA                 GCTG TTT CCGC                 TACTCCGCCAAAGGA  74 25
 C1O47_04820 1047036 .. 1047058 -  -7.6  -3.06501   TATACTCTTACGGAA           CTGGGGCGCA GTC TGCGTCCCAT           CCTGGCCTCCATGGC  57 161
 C1O47_04810 1046158 .. 1046185 - -17.7  -2.62184   TTCCTCCCCATAGGA        GCGCGGCCCGC TTTCCT GCGGACCGCGC         CGGTGGAAAAACCGG 100 69
 C1O47_04800 NONE
        lysS NONE
 C1O47_04790 1039468 .. 1039481 -  -4.5  -4.07568   CCGGTCTGCGGAAAA               GCCCT GTTT AAGGC                GCAATAAGAACAGCG  61 99
        plsY NONE
 C1O47_04780 NONE
 C1O47_04775 1037102 .. 1037129 - -18.5  -5.23316   CACTATATGAAAAAA        GGGCTGTCCGC AAACAA GCGGACAGCCC         TTTTGAAATCTTAAC 100 50
 C1O47_04770 NONE
 C1O47_04765 NONE
 C1O47_04760 1033679 .. 1033714 -  -2.6  -3.16068   TTCCCAATGTAAAAC   CCCCTGTTC-C-CGGT AAATCA ACCGCAAGGACAGGGG    CGTTTTACCTGCGCG  42 133
 C1O47_04755 1032228 .. 1032252 -  -8.5  -5.22137   AATGATAAAAGAAAA          GCCGCCTCA GCAACAG TGGGGCGGC          TCTCTCCAAGAAGAA 100 44
 C1O47_04750 1031187 .. 1031208 - -14.5  -5.79595   GCGGAAAATAAAAAA           GAGGCAGCT TTTC AGCTGCCTC            CCTAATAACGAAAGT 100 45
 C1O47_04725 1025981 .. 1026014 -  -9.7  -5.53079   AAAACAGACAAAAAA     GAAGCCCTGTAATCC ATTA AAATTACAGGGCTTA      GAAAATTAGTGGCTC 100 35
 C1O47_04720 1025131 .. 1025141 -    -4  -3.29829   GATATGTTTTCACAA                 CTTT TCC AAAG                 CCTGTCTTTCGCCAT  48 9
 C1O47_04715 NONE
 C1O47_04710 NONE
 C1O47_04705 1023066 .. 1023076 -  -2.4  -3.81503   TTAAATAAGAAAAAC                 CGGG CTC CCTG                 CAACATTCAACGGCA  53 59
 C1O47_04695 1021973 .. 1021984 -  -7.2  -4.13945   ACCGTTACCGGAAAA                CCCC CGCC GGGG                 CTTCCATTCAAAAAG  71 266
 C1O47_04675 1018503 .. 1018528 -  -8.3   -4.4261   GCTTGAAGAGGAAAA         TTCCCGCCCCT GTTC AGGAACAGGAA          GAGGAATCTCCCGTC  79 13
 C1O47_04650 1011691 .. 1011703 -  -6.9  -3.65426   GGAGAAATGTTCAAA                CCGGA ATT CCCGG                GAAACTGCGGCGCCA  64 124
 C1O47_04645 1011106 .. 1011127 -  -2.1  -4.21936   TTTACAAGCCGAAAA           CCCACCGGC TGAA GCAAGTGGT            TCAGAGCGACATGCG  60 311
 C1O47_04635 1008243 .. 1008253 -  -2.4  -4.20806   CACCCGAAAATGAAA                 GGCC GCA GGCA                 CCTCCGCACTAATTT  57 34
 C1O47_04630 1007613 .. 1007628 -  -4.6  -3.38378   TCACATGTTAAAAAC              CGGGAT TAAT AACCCG               TTCCGTATAGCGGGC  52 2
 C1O47_04625 1007042 .. 1007052 -  -4.6  -3.13743   AAACCCCATATGCAA                 CAGC CAT GCCG                 CCGGAAGGAAAGCGG  48 73
 C1O47_04620 1006820 .. 1006840 -  -9.7  -5.72254   GGAAACAATAAAAAA            CGCGCTCTC TGA AAGAACGCG            CCATAAAATGAAAAG 100 41
 C1O47_04615 NONE
 C1O47_04610 1004329 .. 1004365 - -11.6  -3.29263   ATACCGTCCCGACAA    CCCCGTCCGGTCTGAA ATCGA TTCAAACCGGCCGGAA    AACAGGCAATTAATA  76 54
 C1O47_04605 1003786 .. 1003798 -  -2.6  -4.90906   GGAGAATATGAAAAA                CGGC TCCCC GCCA                TCCGTGAGGCAAGGC  72 209
        rfaD NONE
 C1O47_04565 NONE
 C1O47_04560  992551 ..  992561 -  -2.4  -3.14564   TCAGCGGCGCAGCAA                 CCGG GCT CCCG                 CCTTGCGCATTTTCT  42 0
 C1O47_04555  991120 ..  991140 -  -2.4  -4.42788   CGCAATGTCAGAAAA            CGGCTGCC CAAAC GCCAGTCG            CCGGACATCCCCCAT  63 424
 C1O47_04545  990155 ..  990183 - -13.9  -4.96848   GTTTTTATAGAAAAA        GCCGCACCTGG ACAATCA CCAAGTGCGGC        TTGAAAAGTCGTACT 100 57
 C1O47_04540 NONE
        truB NONE
        ribF NONE
 C1O47_04525 NONE
        secG  986489 ..  986517 - -18.2  -3.85817   ACCCCGGTGCACAAA       CACCCCGGC-GCC TTCC GGCAGCCGGGGTG        TTAAAAAGAATGCTC 100 43
 C1O47_04515  985653 ..  985690 - -12.7  -3.07344   TTATGCCTGAATATA   CCGCGGGACCTCACGGCC ATA AGCCG-GAAGCCCCGCAA   AATGAAGCGGCCGCG  79 68
 C1O47_04510  984239 ..  984249 -  -2.4  -4.36914   CCGGCCGGGAGAAAA                 GGCG GCA CGCA                 AAACTCCGTTTTCGA  63 283
 C1O47_04450  973423 ..  973435 -  -4.1  -3.67296   GATTAGCTATTGAAA                CGCAA ACA TTGCA                TCATCCCAATCTTGG  54 440
 C1O47_04440 NONE
 C1O47_04435  966167 ..  966185 -    -9   -4.4846   TAATGCAATAATAAA             TAGAATTC CTT GAATTCTA             CTCTCTTCTACAGAT  86 186
 C1O47_04430  965313 ..  965329 -  -3.1  -2.99762   ATTAAAAATTCAAAT              TAAAAAA TTG TTTTTCA              TAAAAATATATAACT  42 145
 C1O47_04425  963875 ..  963885 -    -4  -2.75803   AGAACACTTTAACTA                 TTGA CAT TCAA                 TAAATTGATCCGAAA  44 182
 C1O47_04420  962559 ..  962607 -  -8.1  -3.33151   TTCTGGAAATGAACA TCTGCTGCCACCTGGGCAAAAG CGGCTC CATCTG-CCTGGCGGCCGCAGA ACACGGCTACTCCCA  62 171
 C1O47_04395  957330 ..  957340 -  -8.2  -4.09685   CGTGATTGTGGAAAA                 CGGC ACA GCCG                 TCACCCATCTTTTCT  73 511
 C1O47_04385  955935 ..  955958 - -13.8  -4.45544   TTGGACCAACGAAAA          CGGCTCCGTC ATCC GGCGGAGCCG           TTTTTTTGCGCTATT 100 259
        typA  952680 ..  952701 -  -6.5  -4.56597   TTTTTTCTGGAAAAA           CCCGCC-AAC AGG GTAAGGCGGG           AAACGCTTTCACCGA  76 317
 C1O47_04350  946655 ..  946687 -  -5.6  -4.25104   CTTCCTGCATTAAAA     GGC-CGGGAAAAAGC CCCG GTTTTCTCCCGCACC      CATGGGTCAAGAAAC  66 32
 C1O47_04330  942682 ..  942694 -  -3.3  -2.57132   GGCCTCCCGCAGAAG                CCGCA TCA TCCGG                AACAAATGGAACGCT  40 266
 C1O47_04320  939959 ..  939985 -  -3.6  -4.05446   TTCGGGAAGGAGAAA         CGGTTTCCATTC CGG GCATGGGAACCT         CTGCCCGGACAAAGC  59 52
 C1O47_04310  937157 ..  937169 -  -4.8   -3.6849   ATTGAACTGCAACAA                CAGG CGTCT CCTG                AAGGACAACAGCGTT  56 39
 C1O47_04305  934694 ..  934709 -  -6.8  -3.59293   GGAAATGGAAACCAA              CGGCAC CATC ATGCCG               GATACGGAACTGCTG  60 468
 C1O47_04260  925749 ..  925784 - -12.7  -2.94232   CTGCCCGTAAACAAG   CCGGGCCCGC-TTCCTC CGGA GAGGAACGCAGGCC-GG    AAAGGTCTTTCGTCA  75 54
 C1O47_04225 NONE
        trxA  918549 ..  918581 - -20.6  -5.40072   TGCCCGGTAAAAAAA      CCGGCCTGCCGCAG TAAAT CCGCAGCAGGCCGG      CTTGAATGAATAAAC 100 53
 C1O47_04215  917060 ..  917076 -  -6.5  -3.33792   ACCACGGAGAGAATA              TTCCGGA TTT TCCGGCA              GAGAAGGAGGGGATA  58 52
 C1O47_04210  915386 ..  915406 - -11.1  -3.85704   TGATTAACTACGAAA            CCGTTCCGG AAC CCGCAACGG            CCACGCTGAGCCTCC  80 246
 C1O47_04150  900390 ..  900406 -    -8  -2.97667   TGATTTACGAAACTA              TTCCGC CGTTC GCGGAA              CCTTGTCGCAAGCAA  60 76
        rpsB NONE
 C1O47_04140  898565 ..  898592 - -16.4  -4.97158   CCATATCAAACAAAA        GAACCGTTCCCC GCAA AGGGAACGGTTC         CAGAGATACTCTGAC 100 48
 C1O47_04135  898098 ..  898114 -  -2.9  -3.65046   CCGCCACCCTAACAA              GCCTTCC GAT GCAAGAC              AAGACCCCAGCCGCG  49 56
 C1O47_04130  897250 ..  897262 -  -5.5    -3.737   TAACTCCGCAGGAAA                CGGAA CTT TCCCG                TATTCGTCCAAACTG  59 59
 C1O47_04125  896683 ..  896703 -  -8.3  -4.08394   ATAGGCCGGGGAAAA            GACGTCCAT GAG ATAGACGCC            GCTCTGATGGAGGAA  73 79
 C1O47_04005 NONE
 C1O47_04000  866721 ..  866732 -  -4.4   -4.7497   CTTATTGACGAAAAA                TTCC TCTT GGAA                 GATATCAAAAAATTA  74 304
 C1O47_03980  861409 ..  861434 -  -6.7  -4.08064   AATCTCCCGTGAAAA         CTGCCAGGGCC AGCT GGCCCTCGCCA          CCCGGCAATACGCCA  68 150
 C1O47_03925  848582 ..  848610 -  -5.3  -4.47707   CTCCATCAAAAACAA       CGC-CGGACCGGG GAGAA CCCG-TCCGAGCA       AAAGTTCCCCTCCTT  71 61
 C1O47_03905  844269 ..  844299 -  -8.4  -5.38054   CCCTATAAATAAAAA       CTGCAATATACTCA TCA CGAATATATTGCGG       TGGAAAATTGATGGC 100 37
 C1O47_03900 NONE
 C1O47_03895 NONE
 C1O47_03890  841590 ..  841601 -    -3  -4.77157   GCAAGTTATGAAAAA                TATG GTCT CATA                 CAATGTATATTAAAG  70 485
 C1O47_03885  838470 ..  838498 - -11.1  -5.38054   GGTCACAAATAAAAA        GGTCGTTTCCCTT GAG AAAGGAAACGACT        TCAGAAGAGCATCTC 100 226
 C1O47_03870  833732 ..  833760 - -11.1  -5.38054   GGTCACAAATAAAAA        GGTCGTTTCCCTT GAG AAAGGAAACGACT        TCAGAAGAGCATCTC 100 227
 C1O47_03860 NONE
 C1O47_03855  829876 ..  829898 -    -9  -3.55061   TCATACAGAACAACA           CGGGCATCCG GGT CGGAATCCCG           CCTCTGTCCTGTACA  68 305
 C1O47_03845  829086 ..  829098 -  -4.8   -3.4582   CCACTTCATCAAATA                CGGT GCGGA ACCG                GATAAAATCCTGCAC  52 324
 C1O47_03835 NONE
 C1O47_03830  825991 ..  826020 -  -7.9  -3.41738   CATGGTAATACAACA       CTATACCACGGCA GGAC TGCCGTAATAAAG        CAAGAATAACGAAAG  62 147
 C1O47_03825  825080 ..  825116 - -16.7  -3.53012   CTCCGGCTGTTTAAA    CAAAACCCCGCGTGC CTGAGGC GCATGCGGGGTTTTG    TTCATCATCCGGCAG 100 108
 C1O47_03815 NONE
 C1O47_03810  819850 ..  819860 -  -6.8  -4.77036   CGCCATCACCAAAAA                 CCTG AAT CAGG                 CTCTGAAAGATGAAG  79 436
 C1O47_03800  818621 ..  818657 -  -2.9  -4.09649   TACAGCAGAAAAAGA    GGGCGCGTCAACCCG GAGAACG CAGATTGACGCACAA    AAGGAGTTAATGGCC  56 32
 C1O47_03795 NONE
 C1O47_03790  817092 ..  817103 -  -2.2  -2.82623   CTTTCTCCATAAGCA                CAGA TTTT CCTG                 AACCGGGCGGAATCA  39 38
        rsmI  816168 ..  816192 -  -7.2  -2.59564   TTCGGAGCCGATAAC          CCGGATGAAA AAATA TTTCATCCTG          CTGAGCGATCCGGCC  53 218
 C1O47_03775  814854 ..  814876 -  -7.6  -3.08679   GGCGGGCATCGAATA           CGCCCATTCC AAC GGCACGGACG           CCAGCCGGCAGAAAG  57 186
 C1O47_03760  812071 ..  812084 -  -8.1  -3.67305   GACAGAAACAACGAA               CAGGC GTCC GCCTG                CGGCATTTCCGGGGC  70 42
 C1O47_03740  807258 ..  807277 -   -10  -3.78329   GTGGAGGAAGGCAAA            GCCGTACT GCGC AGCACGGC             GCGGGCGGGGGATCT  75 491
 C1O47_03725  804315 ..  804347 - -15.6  -2.73875   CCCCTCCGAATATGA     GCAGGGAGGGACCCC AGCC AGGGCCCCTCCC-GC      AAATTTGATTAATCC  88 43
 C1O47_03720  801401 ..  801419 -  -8.8  -3.38951   GCATGAAGAGAGGAA             GCCGGC CACGCAT GCCGGC             GTCAGAAAGCTGATC  69 257
        hflX  799579 ..  799622 -  -4.5  -4.03167   GAAGATGAAGAAGAA GCCCGGTCCATGC-TCCGGA AGCTG TCCGGACGCACGCACCATGT CTGCACGGCGGTTGC  61 391
 C1O47_03695  790656 ..  790668 -  -3.4  -3.28924   TACCGGTTTTCAGAA                GGTT GCCTG AACC                GGTGAAGGCGCCGTT  46 7
 C1O47_03690  787453 ..  787463 -  -2.4  -4.15044   CCGTTCCGGAATAAA                 TCCG GAA CGGC                 TCTGAAGGGCCAGGA  57 93
 C1O47_03680  785898 ..  785931 -  -4.5   -2.8805   AGCATTCCGGACACA     CGGTATCAGGGGCG CTCCTGC CGCCCCTG-TTCTG     CGGGCCTTCCTTTAT  47 66
 C1O47_03670  784595 ..  784622 -   -20  -3.60098   ATTTTTTACTGGAAA        GCCGCTTCATCC ACCC GGATGAAGCGGC         TTTCGTCCAAGGTCT 100 54
        metF  780585 ..  780609 -  -7.2  -2.74701   AGATCTGGAAGATTA         CCCCTGCCTCA GTTT TGAG-CAGGGA          ACCTATAATTCCTTT  54 340
 C1O47_03600  768902 ..  768913 -  -3.6  -4.74453   GAAGACAGGGAAAAA                GGCG TTTC CACC                 CTGTTGAACTGGCAG  72 285
 C1O47_03590  767026 ..  767060 - -10.7  -3.55203   AAAAGGGGGCGGAAA     CAACCCCATACCTGC ATGGA ACAGGCAAGGGGCTG     CCGCCCATGCTCCAG  74 401
 C1O47_03580 NONE
 C1O47_03575  765422 ..  765456 - -10.1   -3.7557   TGTAAAAAGGAAACA    GGCG-GGCTGAA-AGGA AAT TCCGGTTCAGCCGCGCC    ATGCATGATGCGTCC  77 15
 C1O47_03570  764925 ..  764963 -  -3.1  -3.50722   CGCAAGCAGTAAACA   CCACCCCCCCTTTCATG GCAAG CGTAAAATGGAAGATGG   ACAAAAAAAGATCAG  49 37
 C1O47_03565  764774 ..  764799 -  -9.8  -5.82036   ACAAGAAAGAAAAAA         CCCTGTAAAC TATTGG GTCTACAGGG          TTTCAAAAAAGGAAT 100 40
 C1O47_03520 NONE
 C1O47_03515 NONE
 C1O47_03510 NONE
 C1O47_03505  753302 ..  753330 - -12.5   -4.3467   ATGGGCATAGCAAAA        CGCTAGGCTAAAT AAA AATCAGCCTAGCG        TCAAAATCTTTATAA 100 62
 C1O47_03500  753006 ..  753020 -  -2.8  -3.80174   ATATTCGGAGAAGAA               GGCA GAGATAT TGCC               CGGCACTTTGTCATC  52 39
 C1O47_03495 NONE
 C1O47_03490 NONE
 C1O47_03485  750144 ..  750162 -  -8.2  -2.55074   TGGAAGCGGAATTCA             TCTGCATC AAC AATGCAGA             CCCGCACACTCTCCA  55 398
 C1O47_03460  747002 ..  747027 - -16.2  -5.79595   GCGGAAAATAAAAAA         GCGCCGCCAT GCAGCG ATGGCGGCGC          CGGGATGGAAAACAT 100 44
 C1O47_03455  746272 ..  746295 -    -6  -3.72893   TACTGGTGTATTAAA          GCATGCAAAT TCAG ACTTGCAAGC           ATCATTTTAGACCCT  62 50
 C1O47_03450 NONE
 C1O47_03445 NONE
 C1O47_03440  744318 ..  744345 - -17.1  -5.29445   CGTCAATAACAAAAA        GCTTCCGCTCC TCTTGG GGAGCGGAAGC         TGAGAGTCAATGAAA 100 61
 C1O47_03430  743575 ..  743585 -  -6.8  -3.01712   TCCCGTCTGTCAAGA                 TGCC AGA GGCA                 TATTTAACATGGCGC  54 293
 C1O47_03425 NONE
 C1O47_03420  738828 ..  738878 - -17.8  -5.42164   CAGAAACAAGAAAAA CTCAACACAAGGGCCGTCTCCCC CCTTAC GGGGAGACGGCCCTTAT-TAAAG AAATATCGGCCGGCG 100 63
 C1O47_03400 NONE
 C1O47_03395  730912 ..  730932 -  -6.8  -4.19238   TCCCGAACCGGAAAA            CGGCAGGA GTCTT TCCTTCCG            GTCACATTTCACTAA  71 27
 C1O47_03360  722039 ..  722064 - -15.5  -5.00339   ATCAACAATGAAAAA         CCGCCCCTTTC CGAA AAAAGGGGCGG          TTTTAAAGACCTTGG 100 61
        proB NONE
 C1O47_03345  717066 ..  717088 - -14.8  -3.23235   TATATATCAACGGAA           GCATCGCGGC CAT GCCGCGGTGC           TTTCTTGTTTACGGC  90 52
 C1O47_03295  703041 ..  703078 -  -2.5  -4.12942   GGAAATCCGGGAAAA   CATGCTGGGAGGCAGAT AGAA AACAGCCTTTCCGCATG    CAGCGCCTTCCGGGA  57 65
 C1O47_03275  697933 ..  697957 -  -3.5  -2.54325   GTGTGGCAAATATAC          CGCAAGGAATC AAC GATTATTCGCG          CTCACGCTTATTCCT  42 33
 C1O47_03270  695226 ..  695242 -  -7.2  -3.27022   GTCATCTGACAGGAA              CGCCGC TCCTT GCGGCA              ACAGTCTCATCAGCG  61 220
 C1O47_03265  692937 ..  692961 - -15.8   -5.5112   TCCATCAACAAAAAA          GCTTCCGGGA ATCCA TCCCGGAAGC          CTGCAGGAAGAACTG 100 49
 C1O47_03260 NONE
 C1O47_03255  691405 ..  691450 -  -5.4  -3.57615   TGAACATGCCGGAAA TTTTCCGGACCGGCAGGGGACG GGCG CGCCGCC--CCGGAGCGGAAAA GCTCCCTCCGGGGTC  56 53
 C1O47_03250 NONE
 C1O47_03245 NONE
        atpA NONE
        atpG NONE
        atpD NONE
        atpC NONE
 C1O47_03220  685425 ..  685439 -  -8.6    -3.786   CCACAAAAGCTGAAA               GAAACG AGC CGTTTC               CGGTATTCTCCAGCA  70 75
 C1O47_03210  683502 ..  683525 -  -7.4  -3.30007   AAGACCGGCCCATAA          CGG-ACGCCCG GCG CAGGCATGCCG          ATCCCGTGCGGGAGG  61 98
 C1O47_03205 NONE
 C1O47_03200 NONE
 C1O47_03195 NONE
 C1O47_03190 NONE
 C1O47_03185  680153 ..  680181 -  -4.4  -3.23481   AAATGAAAGTCAAGA        GCCGATCCGGAT GAACA AACCGGAGGGGC        TAAAAGGCTGCAAAC  50 47
 C1O47_03180  678106 ..  678126 -  -2.4  -4.58283   GAACCTTCTGAAAAA            CAGCGCGC CATCC GCGACCTG            GAATTTCTGCTTCTT  65 193
 C1O47_03150  669044 ..  669069 -  -2.5  -4.02139   TGAAACCCAAAAAGA         CGGAGAGAC-GG TCC CCTATCCCTCCT         TTTCCGTCCTGATAT  55 15
 C1O47_03115  663374 ..  663388 -  -4.2  -3.90112   CCGTGCTGAAGGAAA               CCGG AAGAACG CCGG               ACGACGTCATCCTGG  59 414
 C1O47_03100  659862 ..  659878 -    -8   -3.1352   GTGCAAGGCAACATA              GCGGAT TGCAT ATCCGC              CGCCTGCTTTTTTGC  62 224
 C1O47_03095  658390 ..  658402 -  -6.3  -4.07568   TGTCTCTTCTCAAAA                TGTTG AAA CAACA                GCAAAAACATCAATA  66 35
 C1O47_03090  657360 ..  657371 -  -5.8  -3.06796   CCCTATGGCACGGAA                TGCG CCGG CGCA                 GCAGAAGGAGGGCAA  53 88
 C1O47_03080  656037 ..  656051 -  -2.8  -4.07246   TTACCGGAAATGAAA               GGAACA TCA TATCCC               TACTGGCGAGCCTTG  56 25
 C1O47_03075 NONE
 C1O47_03070  653947 ..  653957 -  -2.4  -2.84051   GCACTGTTATGAAAC                 TGGG TAT CCCC                 TCCACGCTCCGCATG  39 219
 C1O47_03045  649540 ..  649557 -    -7  -3.16261   AATCAGAAAACTATA             CAAGCG TAAAGT CGCTTG              TGGGAATCGAGGGCA  54 464
 C1O47_03035  645761 ..  645796 -  -8.2  -4.24948   CGACCAGATTGAAAA    GAGCGGCGTCAAG-GTG GAG CTCGCCTGACGCCGGCC    TGCTTTACAGGGGGC  76 214
 C1O47_02950  626747 ..  626801 -  -8.7  -4.11484   CGGAACGTTCCAAAA TGTCCGCGCCAATTCCGGAACAGCGTT AAT AACCCTGT-CCGGAA-TAGCGAAGGCA TCAGAAACGCTTCTT  77 26
 C1O47_02945  626524 ..  626540 -  -3.6  -3.16564   AAAAACATCAGGGAA              CCAGCC TTCAC AGCCGG              AACAACTACAACCCG  46 31
 C1O47_02940 NONE
 C1O47_02935  623525 ..  623536 -  -3.6   -2.7263   ATGATTCCCTCAAAT                CCGC AAAC GCAG                 TCAAAAACTTTGTAG  44 72
        queG  610654 ..  610680 -  -5.2  -3.00918   ATGGATACCATAAAT         TGAGGTTTTGAC AAG ACCAAAACATCA         TTTTTTCTATTTTTA  49 38
 C1O47_02880 NONE
 C1O47_02875 NONE
 C1O47_02870  608912 ..  608937 - -12.5  -4.14392   CCTGAATGCCCAAAA         CCCCGGCCGCC GAAA AGCAACCGGGG          TTTTGAAGCAAATCC 100 56
 C1O47_02865  607993 ..  608007 -  -5.8  -3.76373   TTGCTAACATGGAAA               GAAAAA TGC TTTTTC               CCCCCTTGTTAAGAA  62 88
 C1O47_02860  607003 ..  607026 -   -16  -5.65513   CAGCAATTAAAAAAA          GCGCGGCGGA TTTC TCCGCCGCAC           CTGAAAATATAATTC 100 59
 C1O47_02855 NONE
 C1O47_02850  604681 ..  604697 -    -5  -5.02074   TTACGTCGCAAAAAA              CTGCGG GACTG CCGCCG              GAGTCATTGTTATCC  84 369
 C1O47_02835 NONE
 C1O47_02785  589628 ..  589671 -  -2.5  -5.26875   TCCGCAACCAAAAAA GACAC-TTCCCGGGCAAAAA CAAAT TTCCTACCCGGAAATGCGTT CAAATGGTGAAAATA  78 265
 C1O47_02780  587570 ..  587597 - -18.5  -5.24129   TCCTGTTATAAAAAA        GCCGCTTCCCC AATTCA GGGGAAGCGGC         CTTGAAACCACAGGA 100 49
 C1O47_02755 NONE
        gmhA NONE
 C1O47_02745  581723 ..  581734 -  -5.8  -5.61881   GTGCAAAAATAAAAA                GCCT GTAC AGGC                 CAGGTTCACGAGACT 100 186
 C1O47_02740  578629 ..  578668 - -10.7  -4.62872   ACCAAGGGCTAAAAA  TCCAGGGCGGCTATTCC ACGGAA GAAACAGCCGCCCCAGG   GCCAGAGGACACCAC 100 69
 C1O47_02730 NONE
 C1O47_02725 NONE
 C1O47_02720  574898 ..  574911 -  -2.3  -4.07568   CGCTGGGCGCTAAAA               CGGGA GTCA TCTCG                GACATTCCGGAAAAC  56 232
 C1O47_02705 NONE
 C1O47_02700  571680 ..  571696 -  -5.8  -4.93877   GGGCATCAAATAAAA              CGCAGG CGGCC CCTACG              CCCGGCAGCCTCAGA  81 36
 C1O47_02695  571313 ..  571324 -  -4.4  -2.52543   ACCGTCCGCAACCGA                CTCA CCGG TGAG                 CCTCCCGCACGGCAT  44 15
 C1O47_02685  569682 ..  569693 -  -4.4  -2.95717   ACCAGACAGAACAAC                TTGG CAGG CCAA                 TTAAGCAATAGCAGT  47 26
        bioD  568920 ..  568934 -  -2.1  -3.61178   TCCAGTCAGTGCAAA              CGTTCC AGCA GGA-CG               TCCATGTCCATGTAA  47 1
 C1O47_02675  566116 ..  566127 -  -5.8  -3.75898   AAGAAATCAGGGAAA                CGGA CTTC TCCG                 GCCTTTCTTCCGCGG  61 445
 C1O47_02665  564255 ..  564275 - -19.7  -4.07568   CGCCCCCTTGCAAAA            GGCCCGGGG AAC CCCCGGGCC            ACAGGGAAAATTCCT 100 39
 C1O47_02660  563288 ..  563311 - -18.2  -4.75372   ATCAGGCATGAAAAA          GGGCGCATCC TTTC GGATGCGCCC           TGTACAAATCATACT 100 51
 C1O47_02655  562758 ..  562774 -  -3.7  -4.03413   ACTCCTGCAGACAAA              TAAACCT CCC AGGTTTT              CCCCACCAGGGCATT  59 173
 C1O47_02645 NONE
        nadD  559022 ..  559058 -   -11  -2.52946   TTCCTCTACAAAATG   GTGC-GCCTCATGA-CGG GAG CCGCCCATGAAGCCGCAC   GGGGAAAAATAACGC  67 192
 C1O47_02630 NONE
 C1O47_02625 NONE
 C1O47_02620  550092 ..  550105 -  -2.3  -2.78813   TTTCATCTCAATAAG               TCGCA TCAC TGCGT                TAGACAGCTGGAGGC  39 119
 C1O47_02615  549145 ..  549161 -  -4.3   -4.3208   GGTTATAACGGAAAA              CAAGCCG GCG CGCCCTG              AGCCGGGCGGCAGCC  66 83
        rpsO  548187 ..  548220 - -10.1  -4.82901   CCCCTCCCATAAAAA     CAACGGCCGCTGCGG AAAA CCGCAACGGCCGAAT      CAAACGGGAATATGC 100 49
 C1O47_02600  545160 ..  545190 - -20.5  -4.30014   TCCAGCAATCGAAAA       GCCCCGTTCCCGG AATAA CCGGAAACGGGGC       TGAGAATTTAAAGGC 100 54
 C1O47_02595 NONE
 C1O47_02590 NONE
 C1O47_02585 NONE
 C1O47_02580  539157 ..  539168 -  -7.2  -3.63515   GCCTAGCGGGAAGAA                CGGC TTGA GCCG                 ATGGCTTTTACCAAC  64 1
 C1O47_02575  538207 ..  538221 - -11.4  -3.08327   ACCAAACCGGGAAGA               CAGGCC ATT GGCCTG               GAAGACATCGCAAGC  71 246
 C1O47_02565 NONE
 C1O47_02560 NONE
 C1O47_02555  532274 ..  532285 -  -3.6  -4.03043   AGAAAGGGAAAAATA                CGGA TTAA CCCG                 AATTTCCATCAAAAA  59 253
 C1O47_02550  530359 ..  530405 - -15.3  -3.80551   TAAACACTTATTAAA GCTCCGCAGCCGTC-AGGTCCA CGCA CAAACCTTGACAACTGCGGAGC TGCGCTTACACACAC  95 81
 C1O47_02545 NONE
 C1O47_02540  526076 ..  526111 - -13.4  -3.61398   GCCTTGCCTTAACAA    GGCTCCGGAGG-TCG TTGCTTG CGAACCTCCGGAACC    TGAACAACCGTGAAT  86 81
 C1O47_02530 NONE
 C1O47_02525  520827 ..  520837 -    -4  -4.84761   AGATTTTTACAAAAA                 TGTA ATA TACA                 TCCCTTGTTTCGTTC  72 45
 C1O47_02520 NONE
 C1O47_02515  518148 ..  518160 -  -6.9   -4.6902   GGATAAGCGGAAAAA                GGAGG AAG CCCCC                GGGAACAAGCCCGCG  79 102
 C1O47_02495 NONE
 C1O47_02490  510635 ..  510664 -  -3.5   -3.4268   CCATAATTTCAAACA       GGC-CTGCCTCCAT TTC ACGGCAGCAAAGCC       CCGTCATAAATGATC  50 46
 C1O47_02485 NONE
 C1O47_02480 NONE
 C1O47_02475  507804 ..  507820 -  -7.9  -4.57474   GGAACGCAGACAAAA              CCGGGAG CAG CCCCCGA              AGCTCCATCACTTAC  79 37
 C1O47_02450 NONE
 C1O47_02445 NONE
 C1O47_02440  504029 ..  504077 -  -6.6  -4.07885   GACGCCTCCGCAAAA GCGCACGCTG-TAGCGGAAGACC GCAG GGCCTTCCGCAATCACCGGATGC CCTGCCGGGCAATGC  69 60
 C1O47_02425 NONE
 C1O47_02420 NONE
 C1O47_02415  499791 ..  499825 -  -7.2  -2.82142   GGGACATGGAATAAG    TCAGCGCAAAGGGGG TCATTT CCACCTTCG-GCTGA     ATTTCCTTCCTGTAC  56 492
 C1O47_02410 NONE
        rsfS  497258 ..  497283 - -16.2  -5.86976   CCAGAAAAGAAAAAA         CCGTGCCGCA ACCGGA TGCGGCACGG          TGTGAAGTCAGATTG 100 47
 C1O47_02400 NONE
 C1O47_02395 NONE
 C1O47_02390  493855 ..  493888 -  -7.3  -3.01791   ATCTTTTTCCGAATA     CGCGGCCCGGAAAAG CATT CTTTCCCCTGCCGGG      AAAATCATGTTCTCA  57 30
 C1O47_02385  493100 ..  493122 -  -4.1  -3.78775   CCGGGCAGCAGGAAA           CGGAGAAAA CTTAC CCTTCCCCG           TTCAACAGCGGCAGC  54 13
 C1O47_02375  490189 ..  490208 - -13.6  -6.00086   ACATCACAAAAAAAA            CCGCCTGT TTTC ACAGGCGG             TCTCAAGAAAACACG 100 48
 C1O47_02370  489377 ..  489387 -  -5.4  -3.55592   AGAACGCCAGAAATA                 CATG CTG CATG                 CGGAAATCAACCTGT  56 276
 C1O47_02350 NONE
 C1O47_02345  484485 ..  484495 -  -2.4  -3.33162   CATCTGATGGCAGAA                 CGGC CCC GCCC                 TTTCACAAACCCAAC  44 28
 C1O47_02340  482140 ..  482153 -  -2.3  -2.52896   TGACGGGGGAACTCA               TGGCG GAAA CGCAA                GGTTAAAACGTGGTC  38 28
 C1O47_02335  481392 ..  481403 -  -2.2  -3.36749   CAGTTTGAACATCAA                CGTC ATAA GACA                 TCATTCAGCGTACGT  46 16
 C1O47_02330 NONE
 C1O47_02325 NONE
 C1O47_02320  478434 ..  478446 -  -3.3  -3.25657   GAAGCAAAAAAACAG                GACAG AAG CAGTC                AAAGCGACAATATTC  46 153
 C1O47_02315  477227 ..  477241 -    -5  -3.40112   ACCAGACCGGAAATA               CTCATC GCG GATGAA               CCCACCACCGCCCTT  54 510
 C1O47_02260 NONE
 C1O47_02255  463943 ..  463971 - -17.6  -5.05601   CATGACATAGAAAAA        TCCGTTTCCGGA ACGCA TCCGGAAACGGA        TTTCATCAATGAACT 100 51
 C1O47_02245 NONE
 C1O47_02240 NONE
        fusA NONE
 C1O47_02230 NONE
 C1O47_02225  459264 ..  459275 -  -4.4  -2.98942   ATTTGCGGACATAGA                TAGG TTTT CCTA                 TAATCAATGTGAGGT  47 52
 C1O47_02220 NONE
 C1O47_02215 NONE
 C1O47_02210 NONE
 C1O47_02205 NONE
 C1O47_02200 NONE
 C1O47_02195 NONE
 C1O47_02190  455299 ..  455313 -  -2.8  -3.72576   CTCTTGGGCATTAAA               GGCATA TCT TATTCC               TCCTTGTGTTAAGTG  52 68
 C1O47_02185 NONE
 C1O47_02180 NONE
 C1O47_02175 NONE
 C1O47_02170  453889 ..  453915 - -18.1  -5.55769   GGGGACAATAAAAAA         CGCCATCCTCC TTTTC GGAGGATGGCG         TCCAAAATCCTGAGA 100 49
 C1O47_02140 NONE
 C1O47_02135 NONE
 C1O47_02130 NONE
 C1O47_02125 NONE
 C1O47_02120  441863 ..  441873 -  -8.2   -3.1552   GGTCATTGACGAATA                 CCCC ATG GGGG                 AATACACCAACGTGG  60 349
 C1O47_02095  439172 ..  439191 -  -2.7  -5.22039   GGGAAATGGAAAAAA            GAAGCGC CCCCTT GCGCCAC             TCCGGCCTGATTCCC  80 40
 C1O47_02085  437673 ..  437701 - -13.1  -3.93216   GTCAAACGAGAAGAA        CCCCTCCCCGCAA ACA TGGCGGGAAGAGG        CCCGGAAAAACGGAA  87 68
        trmB  436725 ..  436766 -  -5.1  -2.82933   TGGCAAGGGACCAGA CCTGGAACCCGCCGGAATCC GTC AAAATAGGGCG-GTTCCAGG AGGAAAATTTGTGTA  48 278
        yajC  435490 ..  435524 - -17.9  -4.85782   GGTTTCAAAAATAAA     CATCCGCCCCTGCCG ACGGG CGACACGGGCGGATG     CAGGAAACGTACGGA 100 53
 C1O47_02065 NONE
 C1O47_02060  434570 ..  434582 -  -2.7  -3.21595   AATCCCCATCATGAA                GAATA AAT TACTC                CGTACCTTTATCCTT  46 20
 C1O47_02055  433616 ..  433628 -  -5.5  -3.90922   ATGCCTGGGAAAGAA                GCAGA ATA CCTGC                GAATATAAGTTCTTC  62 61
 C1O47_02045 NONE
 C1O47_02040  432561 ..  432584 -  -6.6  -5.08731   CAAGAAACAACAAAA          GGCGATCCCC ATTA AAGGAACGCC           TTCAGGAAAATAATA  91 56
 C1O47_02030 NONE
 C1O47_02025  430128 ..  430144 -    -8  -3.14026   TACAGGCATACTTAA              TGCCTG ACAAG CAGGCA              GGGCGGCACCATTCA  62 94
 C1O47_02020  429618 ..  429632 -  -2.8  -2.79291   AAAGGTGATTAATGA               TGATCT CCC AGTTCA               TTGAGGGCGTCCCAC  41 4
 C1O47_02015  429300 ..  429331 - -12.4  -2.60075   TCCGCTTCAAGCAAG      TTCAGCCGC-TTTGC GAA GCAAAAGCGGCTGGA      AAGTCTATATGATAG  73 90
 C1O47_02010 NONE
 C1O47_02005 NONE
        ybeY  425944 ..  425959 -  -5.4  -4.09685   CCGGATCTTTGAAAA              GCGCGCT TTA AGCGC-C              GGAGCAGCGGTCATG  63 17
 C1O47_01995  425774 ..  425799 - -11.9  -5.40279   CAAAAGAAAAGAAAA         CCCCGCAAACC TTTC AGTTTACGGGG          TTTATAATGGCACGT 100 33
 C1O47_01990  424566 ..  424581 - -10.4  -4.18494   CATCTTCAGGGAAAA              TCCGCC AGTA GGCGGA               CACATCTTCTGGGTT  88 56
 C1O47_01965  419292 ..  419316 - -10.1  -2.81413   GAGGAATCAACAGGA          CTCTATCAAGC CTG GCTTGATAGAC          CTCATACAATCTAGA  63 227
 C1O47_01955  418709 ..  418725 -  -2.3  -2.57881   TAATCCGTTCATAAT              TCACTAA GAT TTAACGA              TGAAATAAATGATCG  39 12
 C1O47_01950 NONE
 C1O47_01945 NONE
 C1O47_01940 NONE
 C1O47_01935  415442 ..  415457 -  -3.2    -3.794   GTCGAATTCATCAAA              GGCCAT GCGG ACAGCC               TCAAGGATAGTCTCC  52 76
 C1O47_01930 NONE
 C1O47_01925 NONE
 C1O47_01920  414437 ..  414454 -  -2.7  -3.63569   GGAACTCTGGAAGAA             GC-AGTTG TAG CAACCAGC             AACCCAATTGGTTGT  49 109
 C1O47_01915 NONE
 C1O47_01910  413296 ..  413319 -  -7.4  -2.73994   ATTTCGGCAAGATCA          CCGAGGACTC TGGC AAGTCCTCGT           CCCACAAGCAAAGGT  56 387
 C1O47_01900 NONE
 C1O47_01895 NONE
 C1O47_01890 NONE
 C1O47_01885 NONE
 C1O47_01880 NONE
 C1O47_01875 NONE
 C1O47_01870 NONE
 C1O47_01865  405777 ..  405791 -  -4.2  -2.76315   CGAACAGTCCTAAAT               GGGATA AAA TTTCCC               CGTATGTTTGACGGC  45 5
 C1O47_01860 NONE
 C1O47_01855 NONE
 C1O47_01850 NONE
 C1O47_01845 NONE
 C1O47_01840  401875 ..  401887 -  -3.5  -3.15548   ATGAACGAATAGAGA                TTTAA GGA TTAAA                CAAGCTCCTGCGCCA  46 21
 C1O47_01835 NONE
 C1O47_01830 NONE
 C1O47_01825  399436 ..  399451 -  -4.8  -5.07567   TTATATTTTAAAAAA              GAAATA AAAC TATTTC               TATAACAAATCTTTT  80 110
 C1O47_01815 NONE
 C1O47_01810 NONE
 C1O47_01805 NONE
 C1O47_01800 NONE
 C1O47_01795 NONE
 C1O47_01790 NONE
 C1O47_01785  394515 ..  394534 -    -7  -2.52464   GGGGGTTTCAATCCA            CGCACACC TTGC GGAGCGCG             ACTGGCCGCCCCCCA  52 67
 C1O47_01780 NONE
 C1O47_01775 NONE
 C1O47_01770  391154 ..  391164 -  -2.4  -2.79878   TTCATGGATTCAAAC                 GGGC GTC GCAC                 AGGGCAAGCATGACT  39 1
 C1O47_01765  388380 ..  388409 -  -7.1  -4.21811   CACTGAACACAGAAA       CGCCCCG-GACG AGCAAAA CGTTGCGGGGCG       TTTTCTTTTGGGCGA  71 176
 C1O47_01745  385669 ..  385680 -  -2.2  -3.23235   CAGAGAGGAATTTAA                CATG GTAA CACG                 GTACTATCGTAACCT  44 10
 C1O47_01740  383426 ..  383448 - -12.8   -5.4505   TTTTCTAATAAAAAA           GCCTCTTTCA CCA CGAAAGAGGC           CTAAACGTTTCAGAA 100 56
 C1O47_01735  382942 ..  382959 -  -2.7  -3.73072   AATTGCTGGACCAAA             TGGAATC TTGC GATTTCA              TTTGCGCCATGCTTC  52 23
 C1O47_01730  381260 ..  381280 -  -2.4  -2.75708   CTCGGTGAAAAAAGG            TCGTCACG CACGT CGTGCCGG            GCTTCGCTCCAGGCG  39 141
 C1O47_01725 NONE
 C1O47_01720  380984 ..  381003 - -10.8  -2.71924   CACTTTGTTGGAAAG            CGATTGCT TCTC AGCAATCG             TTTTCTTTGCCACGC  69 80
 C1O47_01715  377973 ..  377989 -  -2.3  -2.95942   TGCACAGGTAAATGA              GACAA GAGCAAG TTGTC              ATTCACGACGGGGAG  41 50
         rrf  377612 ..  377651 - -16.4  -4.72497   GACCGAGCAAGAAAA  GAACAGGCCCCGCGAGTC GAGG GACTGGCGGGGCCTGATG   GAAAAAAATCCCGGC 100 34
 C1O47_01705  376725 ..  376744 -    -5  -2.81905   AGAATACAGAAATAT            GGCACGCCT GTC AGGCAT-CC            TGAAATACCATTCGT  48 16
 C1O47_01700 NONE
 C1O47_01695  374980 ..  375017 - -17.9   -5.1861   TTCATCAGTAAAAAA   CATCGTGGCCGTTCC GGAAAAGA AGAACGGCCACGATG    CCGAAAAAGTTATAA 100 35
        folK NONE
        panB NONE
 C1O47_01680 NONE
 C1O47_01675  371732 ..  371744 -  -4.8  -2.99458   CACCAGAAAACAGGA                GGAG CTGGT CTCC                AAAAATCAAAACTCC  47 65
 C1O47_01660  368814 ..  368840 - -11.6  -5.24129   CTCCTCCACAAAAAA         GCCCCGTTCATA TTT CATGAACGGGGA         TGAGTCAAATGAAGT 100 64
 C1O47_01650  367799 ..  367811 -  -4.1  -4.65263   AGTCCGGAAAAGAAA                CCATC AGA AATGG                AAATGAATTCCACAA  68 50
 C1O47_01640 NONE
 C1O47_01635  365125 ..  365152 - -17.8  -5.37345   TGGAATGAGAAAAAA        CCGCCGCGAATA TGAC CATTCGCGGCGG         TTAAATTAATCAGCG 100 57
 C1O47_01630  364338 ..  364350 -  -3.3  -4.18494   TACCTGGACGGAAAA                GGGCA AAA TGCCG                TTTCTCCAAGTCATC  59 322
 C1O47_01625  363180 ..  363199 -  -6.4  -5.88565   GCCATAAGAAAAAAA            CATCAGCG TTCG CGCTTATG             GCCGCGCAGCATGGC 100 8
 C1O47_01620  362428 ..  362445 -  -5.6  -4.19177   ACTTGGCAAGAGAAA             TTTGGC GCAATA GCCAAA              TATATCACTCTGTGG  66 30
 C1O47_01615  362073 ..  362101 - -10.3   -5.4505   TGCCGGAAGAAAAAA        GCCTCTCGGTT CATAGAC ATCCGAGAGGC        TTCCTGTATTAGGAA 100 97
 C1O47_01610 NONE
 C1O47_01605  359051 ..  359063 -  -3.4  -3.32832   TCCAAAAATAGCTAA                CATG TTCAT CATG                GAGTACTACAGTATT  46 82
 C1O47_01600  358709 ..  358739 -   -17  -4.18018   GCCTTTCAGCTAAAA       TGAACAGGACAGGA AAT TCCCGCCCTGTTCA       TAATGCCGTTCAATT 100 49
 C1O47_01595 NONE
 C1O47_01590  356806 ..  356820 -  -2.7  -4.00526   AACCTGAGAACGAAA               GCCCG GAATG CGTGC               GGATACCGCAGAAAT  56 57
 C1O47_01585  356333 ..  356346 -  -2.3  -2.56164   GCGGGAATTAGGAAC               GATGG GCGG CCTTC                CACTCGTCAGCCTTG  39 4
 C1O47_01580  355471 ..  355499 - -20.4  -3.05384   GTCCCTCTTACGCAA        CGGCCGCCTTTC TTCGG GAAAGGCGGCCG        TTCTTTTTGAAACCG 100 72
 C1O47_01570  352420 ..  352450 - -17.6  -5.00616   CCCTTCCCTAAAAAA       CGCCCCGGTCTCCC TCC AGGAAACCGGGGCA       TCCATAATCACATGG 100 57
 C1O47_01560  349969 ..  349984 -  -2.6  -4.23434   CAAAACATTCCAAAA              CCTTTT CCGC AAAAGA               TCGCACGTCCTCTTC  57 297
 C1O47_01550  348905 ..  348923 -  -2.5  -3.71848   CCTCTTCAGGAACAA             TTTTCCT TCATC AAGAAAA             TGCTGTCATGGAAAC  51 323
 C1O47_01540  348452 ..  348473 -  -4.3  -3.28791   ATTCCCCCGCGACAA           GCACCACCC ATGA AGATGGAGC            CACTGGTCGGAATTG  50 20
 C1O47_01535  348344 ..  348364 -  -3.2  -3.71848   TCCTTGCAGGAACAA           CCG-GATGG TACC CCGTCACGG            GCTCGAACCGTGGAC  52 10
 C1O47_01530  348199 ..  348224 - -10.5  -5.09762   TTGGAATAAATAAAA         TCCGGCTTTGCC ATC AGCA-AGCCGGA         CTAAAAAAGAAATGG 100 38
 C1O47_01525  345619 ..  345629 -  -4.6  -3.08327   AGCAAACGGCCAACA                 GGGA CAT CCCC                 GGAAAAACAAGCTTC  48 303
 C1O47_01520  344381 ..  344397 -  -4.4  -3.88137   AGAAGTGGGCAGAAA              GCCTCA GAACT TGAAGC              GGACAGCCCCGAAAA  59 12
 C1O47_01510  342227 ..  342241 -    -7  -4.08767   GCCAGGCGTTCAAAA               GGGACG GCG CGGCCC               TCCGGCAGATAGGGA  69 222
        thiD  340924 ..  340943 -  -7.2  -3.06737   TACTAATTCTTAAGA            GCTCCATGT GGC ACATGG-GC            GTGGATACAACTACC  59 155
 C1O47_01495  340540 ..  340561 - -15.1   -5.4492   CAGACATACAAAAAA           CCGCCGCGC AATT GCACGGCGG            TTTGTCAAAACTGTT 100 79
 C1O47_01490  338914 ..  338934 - -12.5  -4.29432   GAAACTTCAGGAAAA            GGAGCAGGG AGC CCCCGCCCC            CGCGAAGCAGGCCGA 100 91
 C1O47_01470  330829 ..  330853 - -11.4   -4.4784   GAAAGGTTAAATAAA          TCAGCCGGCC CACAC GGCCGGCCAA          AGCCGGAACGGCGTT  95 109
 C1O47_01460  327027 ..  327053 - -17.3  -4.24183   TATAAGAAATAATAA         GGCCGCCGCCT TTATC AGGCAGCGGCC         TGTGAATTGACCAGT 100 58
 C1O47_01455  325029 ..  325060 -  -5.1   -4.8622   GGGGGCAATGAAAAA      CTCCTGAACTGGC TTACCG GCCAGGTCATGAA       GGCCGCCAAAGGCAA  80 150
 C1O47_01440  321453 ..  321489 - -16.6  -4.64861   TTTTTTCAAAACAAA    TCCGCCCATGCCGC GGGAACGTG GCGGCATGGGCGGG    AAAAAGCGGGTTCCG 100 56
        rfbB NONE
        rfbA  319393 ..  319404 -  -3.6  -3.90112   TCGCCGGGAAGCAAA                CCGC CCCC ACGG                 AAAACCGCGGGATTT  58 84
 C1O47_01380  309548 ..  309564 -  -3.7  -4.12198   CATAATCCCCTAAAA              GGCAA TCCAAAT TTGCC              GTACGTCCTTAATTT  59 39
        rplS  309070 ..  309096 - -17.3  -5.63517   TCCGGAAATAAAAAA        CCCGGCGCCGCC TCAC GGCGG-GCCGGG         CCAGCAAAATAGCAA 100 50
 C1O47_01300  291698 ..  291708 -    -4  -4.43669   AGTTAAAAAATTAAA                 TTTG GAA CAAA                 AGAAGGAATTAGCGA  66 511
 C1O47_01235 NONE
 C1O47_01230  274933 ..  274952 -  -3.4  -2.78384   CGCCTTTTTATCACA            TTTGGCCG GAAG CGGCCGCA             TAAGCCTCCATCTCA  41 1
 C1O47_01225  274094 ..  274107 -  -2.3  -3.36968   GATTCAATGGCAGAA               CCCCC GTTC GGAAG                TTTCCACGAATTGGA  46 0
 C1O47_01220  273040 ..  273052 -  -9.1  -3.01712   CCTCTCTGGGCAAGA                GCCTG AAC CAGGC                GGTAGCCCAGTACAA  61 349
 C1O47_01205 NONE
 C1O47_01200  266751 ..  266766 - -10.4  -4.88736   GATTATTCAGAAAAA              CGGGCA TTGC TGCCCG               TTTTTTTATTTTTCT 100 212
 C1O47_01185  258319 ..  258349 - -16.9  -4.52589   CTCCCGGACACAAAA       GCGCCGCTTTCCC GGAAA GGGAAAGCGGCGT       GAAACGGAATGGAAA 100 54
 C1O47_01140  247976 ..  247998 -  -7.7  -3.09933   GCCGAACCCATGTAA          CGCCTATCGC TCCG GCGAC-GGCG           GAAGAACTTAAAACG  57 425
 C1O47_01100 NONE
 C1O47_01095 NONE
 C1O47_01090  237013 ..  237048 - -16.4  -4.87892   TGGCAAGAAAATAAA    TTTCCCCCGTCCAC-AT TAC ATGGTAGACGGGGGAAA    GAAATCAGCAATATT 100 40
 C1O47_01085  236396 ..  236412 -  -6.5  -4.46757   AACATACGCAGAAAA              CGCGG TTTTCCT CCGCG              CTGCCCCGGTTCAAA  76 36
        ftsA NONE
 C1O47_01075 NONE
 C1O47_01070 NONE
 C1O47_01065 NONE
 C1O47_01060  231161 ..  231173 -  -2.7  -3.64755   ACAGACGGTTAACAA                CATTA TTT TAACG                AACGGATTCATGATG  49 20
 C1O47_01055  229969 ..  229996 -  -3.4  -4.57341   AATCCCGGGTAAAAA        CCCTGCAATACCG CTC CGGCATTAC-GGC        CTACTATATCCTGAC  67 287
 C1O47_01040  226468 ..  226496 - -15.3  -5.07011   GAGAGAAAGCAAAAA        CCCCGCAACGG AAGAAAA CCGTCGCGGGG        CCATTTTCCCAAATC 100 66
 C1O47_01035 NONE
 C1O47_01030 NONE
 C1O47_01025  222539 ..  222551 -  -5.5  -3.02902   TACTTAAAAACATCA                GTCCC TGG AGGAC                TTGGGATCCAGGGCG  51 10
 C1O47_01020  222121 ..  222134 -  -3.7  -3.08813   CTTCATGGTAAGACA               GCCCG GCGA CGGGA                ATGCGAACGGAAAAA  46 46
 C1O47_01015  221822 ..  221848 -  -2.2  -2.62184   GCCTGTTCCATATCA         CAAGAATGATAC CCG GCCTCCTTCCTG         CTGCGGAAGCTCCCC  39 48
 C1O47_01010 NONE
 C1O47_01005  220409 ..  220422 -  -3.7   -4.0964   AAGAAAAAAGGTAAA               TGCCG CCTC CGGCG                TTCTATTTGAAACGC  59 28
 C1O47_01000  219330 ..  219348 -  -8.8  -2.64616   GCGGCAGCCACATCA             TTGTCCCG GGC CGGGACAT             GCAATACGACGGAGT  61 86
 C1O47_00990  217441 ..  217457 -  -7.3  -3.14683   ACAGCGGCTCATTAA              GGAAATC AGG GATCTCC              CGGTGCCGCCGCCCA  57 198
 C1O47_00955  210816 ..  210862 -   -10  -3.53012   CCGTTTTTCCTGAAA CCGCCGGGGCAAAAGATCGGAC GGC GCCCAGTCATTTACCCTGCCGG ATTTTCCGGATAACC  74 10
 C1O47_00950  210299 ..  210330 - -15.2  -3.74693   CCGGATGCCATGAAA      GAGCCTCCGTGCAA ACAT CCGCACGGAAGCTC       TTTCATTAACAGGAT  95 40
 C1O47_00920  203742 ..  203765 - -13.9  -5.36441   CCCGCACATAAAAAA          CCGGAGGGA TTATTT TCCCTCCGG           TTTTCGGATACGGCC 100 52
 C1O47_00900 NONE
 C1O47_00895  201042 ..  201052 -  -2.4  -4.57482   CCAGCCATAAAGAAA                 CCGG AAG CAGG                 AAATATCCCCCGGAA  62 111
 C1O47_00865 NONE
 C1O47_00860 NONE
 C1O47_00855  191293 ..  191317 -  -2.8  -5.00616   CCTTCCCGGAAAAAA          CAAGCCTG CCCCCATTC CCGGCTTG          ATGGCATCCGGTTCC  73 126
 C1O47_00850  190519 ..  190561 -  -4.1  -3.66401   GGGAGAAAGGAAACA CAGGAGTTCCGGAACCGTTCC GGG GAATCGGC-CCGGCA-TCCCG GTCATTCCTCCAACC  54 27
 C1O47_00845 NONE
 C1O47_00840 NONE
 C1O47_00835 NONE
 C1O47_00830 NONE
        tsaA  186298 ..  186315 -  -3.5   -3.9122   TATTTTCTGAAACAA             TTTCTCT ATTG AAAGAAA              AATACCCTAGATTTG  58 153
 C1O47_00810  184119 ..  184131 -  -2.7   -5.0133   TATGCTCCTAAAAAA                TTTCC GCT AGAAA                CCGATAATAATTCTT  73 248
 C1O47_00795  182762 ..  182786 - -14.4  -5.00642   TAACTTAGACAAAAA          CGCTGACTAG GTATT CTAGTCAGCG          TTTTTCATAATATAT 100 55
 C1O47_00785  181943 ..  181955 -  -2.6  -3.55071   TCATATTTTTCCAAA                CCCG TTCCC CGGA                AAAAAGCACGGGCTT  47 44
 C1O47_00780  180250 ..  180260 -  -6.8   -3.0263   AGCACCTGGTCAATA                 TCCG TAT CGGA                 ACCCGGTTCAAAAAT  54 320
 C1O47_00770  175603 ..  175623 -  -9.7  -2.91593   TACGCGCCCAGAAAG            CCGCAGC GGAACAA GCTGCGG            AAACTTACCGCAAAA  65 516
 C1O47_00725 NONE
        rpmG  166153 ..  166164 -  -2.2  -4.02532   TAATAATAAAGATAA                TCGA TAAG CCGA                 ACCAGTTAACGCATT  55 31
        rpsR  165816 ..  165848 - -16.3  -4.86731   TGGGTGGAAATAAAA      CGGGAGTCTGCCCTG TTA CCGGACAAACTCCCG      CCTGCAAAGACAATT 100 70
 C1O47_00710  164974 ..  164984 -  -6.8  -3.86897   GTTATCGTTCATAAA                 TCCG GCG CGGA                 AATGGTTCAGGAACG  67 32
 C1O47_00705 NONE
 C1O47_00700 NONE
 C1O47_00695  162091 ..  162124 -  -5.1  -4.51174   CTACCACAAGCAAAA     CCGGGCGGCGCATCA AACG CGATGCTTCAACCGG      GCAGTTTATGAGCGA  70 124
 C1O47_00655 NONE
 C1O47_00650 NONE
 C1O47_00645  153058 ..  153084 - -17.4  -5.24129   CCCCTCCACAAAAAA         GCCCCGTTCATA TTT CATGAACGGGGC         TATATTAATTTTTCA 100 44
 C1O47_00615  143619 ..  143632 -  -5.9  -3.37259   AAGGAGGGGGAAACA               GCACC GCCC GGCGC                TCCAGAAAAGATTCC  57 109
 C1O47_00605  141298 ..  141322 -  -2.7  -3.86897   TCTAGTGGTGATAAA          CCGTAGGGG TTCGAGT CCCCTCCCG          AGCACCATCCTCTTT  54 246
 C1O47_00600  139931 ..  139941 -  -3.2  -2.65139   AGCAGGGAAGAAGAC                 GAAG GTC CCTC                 CAAAGCTGCCGATTT  40 373
 C1O47_00585  137460 ..  137473 -  -6.7  -3.19602   TGGTTTAGATTAAGA               TGAGG CCTT CCTCA                GGCAAGAAGCAAAAT  58 248
 C1O47_00580 NONE
 C1O47_00575  133864 ..  133892 - -15.3  -4.05714   ATGGTTAATGATAAA        GGCCTCTGCACGC AAT GCATGTAGAGGCC        GGGAAATGGCGGATA 100 322
 C1O47_00570  133216 ..  133268 - -15.5  -4.54449   ATACGGCAGATAAAA CAAGACTCCGTTGCCGGAGCCCTCC ATG GAAAGGCTCCGGCAACAGGGATATG CAGATGTTTACCGCA 100 33
 C1O47_00565 NONE
 C1O47_00560 NONE
 C1O47_00555  131224 ..  131254 - -12.6  -4.54727   GGGTTGAAACGAAAA       CACCCGCTCCCC TGCGAAT GGGAAACGGGTG       TTGAGGGATGAAGAC 100 279
 C1O47_00550 NONE
 C1O47_00545  129828 ..  129840 -  -3.3  -3.21099   CCCTGCCATTATCAA                GCCGA AGG CCAGC                ACGATTCCCCATTTG  46 99
 C1O47_00505  116609 ..  116623 -  -3.5  -2.95307   GAACACAGAGGAAAG               CGGCT ATCAA AGCCA               TGAGGGAGACGCAAA  45 47
 C1O47_00495  115646 ..  115667 -  -5.1  -4.11235   CAATGAGCATAGAAA           GGAAGACGT AACA ACATCTGCC            ATAAAAATATCCCGG  63 45
 C1O47_00490  114946 ..  114958 -  -2.7  -3.97622   CTATTCAAAATATAA                GAAAT TCC ACTTC                CCAGTAGGGCTGCTG  56 383
 C1O47_00485 NONE
 C1O47_00480  111298 ..  111311 -  -2.3  -3.99374   CTTGAGCAAGAAGAA               CGGGA GCCT TCCCT                CCTTCCTCCTGTGAT  55 464
 C1O47_00475  108982 ..  108994 -  -5.5  -2.80575   AAAAGGGTTATCAGA                GACAG CAC CTGCC                GTGAATGATGAGCTT  48 208
 C1O47_00470  108321 ..  108340 -    -3  -2.97925   ATTTTATATCATACA            TTTTTAAT TTTC ATCAAAAA             ATATGATATAATTAT  42 270
 C1O47_00400   95841 ..   95869 - -12.6  -3.28712   GCTCCGTCCGCAGAA       GCGGGAAGGGAAA GAAC TTTCCCTTCCC-C        ACCATATTCGGAAAG  81 58
 C1O47_00395   95265 ..   95291 -  -6.4   -4.4009   TTTTACGTTAGAAAA         CTCCGCCGTCCG AAC CAGAAGGCGGCA         TGGCCGGCGCCTCCC  71 73
 C1O47_00350 NONE
 C1O47_00345   82026 ..   82051 -   -14  -5.75342   CCCTTTCAAAAAAAA         CTCCGCCCGG TTCGTT CCGGACGGAG          TTCGGCGTAAGGCGC 100 56
        recJ   80118 ..   80147 - -13.7  -3.24245   TTATTCACAACTCAA       CGGCCTATTGCTA TTCA CAACAATAGGCCG        TTTTCTACATTTCCC  83 30
 C1O47_00330 NONE
 C1O47_00325   78293 ..   78306 -  -3.9  -4.09108   TTCAACTCACACAAA               TTCAA TGTA TTGAA                TGACACAAAGTAAAA  59 392
 C1O47_00320   77998 ..   78008 -  -5.4  -3.53855   TTCTTGAAAAATATA                 GAGA TCA TCTC                 CTATTAGGGTTAGAC  56 19
 C1O47_00275   65500 ..   65511 -  -5.8  -3.64703   GCCTTTTCACCCAAA                GGCA CCAA TGCC                 AACTTCGCCAGAATC  58 336
 C1O47_00240   58434 ..   58445 -  -7.2  -3.48276   GTCGCGGCCACACAA                CCGC CTGA GCGG                 GAAACGCCTTTCCCT  62 39
 C1O47_00235   57867 ..   57889 -    -4  -5.28176   TTCAGCCATAAAAAA           CAGCCTTCCG GAA CAGTATGCTG           AAAAACGGATATATC  82 107
 C1O47_00215   48728 ..   48745 -  -2.1  -2.64274   ACGCTCTTAAAGTGA             TTTATTC TGTA AAATAAA              TTTTCAGAATTTTTC  39 9
 C1O47_00210   47041 ..   47054 -  -3.9  -3.87373   TATATCGTGCATAAA               CATAA TGGT TTATG                GATGGATATATTCCA  57 165
 C1O47_00205 NONE
 C1O47_00200   45261 ..   45271 -  -4.6  -3.35046   GTATGCCGGGAAAGA                 GGGA TAT CCCC                 AACTGCCGCAGGAAG  52 145
 C1O47_00195   42928 ..   42942 -  -3.6  -3.32022   CGGGGGATAGATTAA               CTGATA ATA TATCAA               CCGATTTTTGGAGAA  48 206
 C1O47_00190   42286 ..   42313 -  -4.8  -3.96148   GCTGTCGAGCATAAA        GGCTC-GGGGGAA TGT TTCCGCAAGAGCC        GTGAGGCCTTTCTTC  59 358
 C1O47_00165   38458 ..   38472 -  -2.1   -4.4261   TTGGCAACAGGAAAA              TGCCGG AAAA CCGG-A               GAAATCCGCCCGTTA  60 38
 C1O47_00160 NONE
 C1O47_00155 NONE
 C1O47_00150   35378 ..   35408 - -17.7  -5.24129   GTTTCCCATAAAAAA       GACTGCCTCCGCT GCAGG AGCGGAGACAGTC       GGGGGCAATATAAAG 100 58
 C1O47_00145   34599 ..   34614 -  -3.2  -3.53811   TTTACCCGGTTGAAA              GGCC GGAGAAAA GGCC               AATCCCCGGAATCCT  49 93
 C1O47_00140   33011 ..   33039 - -16.1  -3.17219   CACAACCTTCACGAA        GGCAGGACATTCC CAA GGAATTTCCTGCC        TTTTTTCCGATGGGA  93 181
        rpoN   24879 ..   24897 -  -4.5  -3.45395   ACAATTCAAAATATA             GGGGACT GTCAT ATTCCCC             GGCGCAGGGAAGCGG  52 15
 C1O47_00100   23516 ..   23552 -  -7.8  -2.83822   GGTAGCGGACAACGA    CGCGCCCGAACCGGCA AAAAA CACCGGCCAGGGCGAG    AAAGCATCCTGACGT  56 56
 C1O47_00080   18976 ..   18991 -    -4  -4.00782   TGAGAGGATGAGAAA              GATGGCG GAC CGC-ATC              AAGAACCTGATGGAG  59 260
 C1O47_00070   18431 ..   18467 -  -9.4   -4.7497   TCCATGCAGGAAAAA   CGTTCCGCTCCCCGCAG GAAG CCGCGGAAAG-GGTACG    GAAGGAACGGCAGCC  86 57
 C1O47_00060   15228 ..   15263 -  -2.5  -4.09685   CTGCAGCGTTGAAAA    TTGCCTTTTCCCCCA TCCGTC CGGAGACAGAGGCAA     CATTGTTCATTCTCC  55 212
