 C1O54_00015 NONE
 C1O54_00020 NONE
 C1O54_00025 NONE
 C1O54_00030 NONE
 C1O54_00035    9097 ..    9113 +  -3.5  -3.98816   ATGCAAGAAGAATCC              GCGGCGG AGA CCTCCCC              TTTAATCTTGATTTG  59 311
 C1O54_00040 NONE
 C1O54_00045   12034 ..   12051 +  -4.9  -2.78405   ATTTTTTCCACTCAT             TTTTCCT ATGG AGGAAGA              CCTTTTTTCCCTGGC  45 43
 C1O54_00050 NONE
        pgsA   15192 ..   15220 +  -4.5   -4.7629   TACTGCGCGGGCGCC        CGCAAATTTCTGC AGC GCTGAAAATTGCC        TTTTTCCATTCATCA  74 5
 C1O54_00065   17686 ..   17697 +  -2.2  -3.68351   GTTCCAGCCGGGAAG                CTTC AACC GGAG                 TTTCAATCATGAAAA  50 92
 C1O54_00070 NONE
 C1O54_00075   18670 ..   18694 +  -7.2  -2.56773   GGCGGCGGCATACCC          TCCTGATTCT CTTCA GGAATCAGGG          ATATTCCGTTTTTAC  55 20
 C1O54_00080   20338 ..   20361 +  -3.9   -5.4833   CTCTTTGCAAAAAAA         CAGGCCCAGCT TGCA AGC-G-GCCTG          TTTTTTATTGCGTCA  85 110
 C1O54_00085 NONE
 C1O54_00090   22669 ..   22689 +  -5.3  -3.03661   TCCTGACGTTTCCCT            CTCTCCCCG TTA CCGGGACAG            CTTTCTCCTTCCGTG  51 35
 C1O54_00105   26420 ..   26431 +  -7.2  -3.14963   CAATTCATTTTTCCC                GGCG GCTC CGCC                 TTGAATGCTTATGAG  59 213
 C1O54_00110 NONE
 C1O54_00115 NONE
 C1O54_00120 NONE
 C1O54_00125 NONE
 C1O54_00130   32110 ..   32138 + -13.9  -5.00616   CACAACCTTCATTAA        GGCAGGACATTCC TAA GGGATTTCCTGCC        TTTTTTACGGAGGGA 100 72
 C1O54_00165   39126 ..   39138 + -10.5  -3.65812   TCCGAGTTTCCTTCG                CGGGC CCT GCCCG                TTCTATTCAACAAAC  80 47
 C1O54_00170   40703 ..   40750 + -14.4  -5.04385   GACACCCCCTTTCAA CGGGATTGTTCCAAGACAGGC AAAACGG GCCT-TTTCGGAACAATCCCG TTTTTTACGCCTCTC 100 46
 C1O54_00175   41052 ..   41070 +  -7.4  -3.08032   TCCATTTTTTGTCTT             CGGGGTTA TTG TAACCCCC             TCATTTTACAAAGCC  59 37
 C1O54_00180   42016 ..   42050 +  -2.9  -4.59853   TTTGTGGACCTATTT     TCGGGGGATAGATTA ACTGA TAATATATCAACCGA     TTTTTGGAGAATTAC  66 325
 C1O54_00215 NONE
 C1O54_00220   55721 ..   55737 +  -6.6  -4.86621   GGCATGATTTCAAGA              TACAGG TAGTC CCTGTA              TTTTTCCTTAACCAT  84 370
 C1O54_00235   57924 ..   57940 +  -4.3  -3.54146   TCAAATAATTCTTGC              CTTTCGG CTT CCGGTAG              TATTTACTTCGCCGC  54 60
 C1O54_00240   58064 ..   58085 +  -4.5  -4.28049   GCCAGCTTTACCGCC           GCGGCAGTTA CGA TAATT-CCGC           TTTTCCCCTTTTCAG  66 37
 C1O54_00245 NONE
        prmC NONE
        priA NONE
 C1O54_00260   63442 ..   63455 +  -6.7  -2.80493   GAAAAGGCGGACTCC               TTCCC ATCA GGGAA                ATTATCTGTTCAGCA  53 54
 C1O54_00270   64830 ..   64862 +  -3.5  -3.09516   GAGGACGGGTAATGT     CTGCCG-CACCA CAACACTAAA TGGTGTCGGTAG      TTCAATGGTAGAGCC  46 174
 C1O54_00275   64948 ..   64964 + -10.9  -5.21709   TTTCCTTCATAAAAA              GAGCACT TAT AGTGCTC              TTTTTTACTATCCCC 100 46
 C1O54_00285 NONE
 C1O54_00290   67368 ..   67394 + -11.7  -5.10033   GCCTACCAAAATAAA         GCCTTACAAGT TAACC ACTTGTGAGGC         TTTTCTTTCTCTTCC 100 33
 C1O54_00300   73249 ..   73273 +  -3.6  -3.78022   GTCTTGTTTCGTTGA          TCTTTCCGAT TTTTT ATCGGAGAAA          TTTGCTAAATATCAA  54 87
 C1O54_00305 NONE
 C1O54_00310   74557 ..   74584 +  -4.8  -4.74215   TTTGTTTATCAAACA        GTTACTGTAGCA AACT TGCAACAGCAGC         TTTTGTTGCTCCTAT  70 173
 C1O54_00345 NONE
 C1O54_00350 NONE
 C1O54_00355 NONE
 C1O54_00360 NONE
 C1O54_00365 NONE
 C1O54_00370 NONE
 C1O54_00375   89386 ..   89411 + -13.3  -5.27335   GGCTTTTCAACCAGG         ACCCCTGCATG CTGG CATGCAGGGGC          TTTTTCTTTGACGGA 100 50
 C1O54_00380   92442 ..   92466 +  -9.9  -4.07568   ACCATGGCGGCGGGA          GCAGGGGCGCG TTC CGCATTCCTGC          TTTTCAGCCAGACGA  79 433
 C1O54_00395 NONE
 C1O54_00400   96404 ..   96434 + -11.2  -4.81249   TATTCCCCTTATCCG      GGCCGCC-GCGGCA TTTCC TG-CGCTGGCGGCC      TTTTTCAATTTACGG 100 59
 C1O54_00405 NONE
        ispD NONE
 C1O54_00415   98606 ..   98621 +  -2.5  -3.71645   GAAAAAAATCCAGCC              GACGG CCCCTC CTGTC               TTTGACTCTCCCCTT  50 144
        trpS NONE
 C1O54_00425 NONE
 C1O54_00430 NONE
 C1O54_00435 NONE
 C1O54_00440 NONE
 C1O54_00445 NONE
 C1O54_00450  102869 ..  102894 +  -9.9  -4.54727   GCACCAATTGATAAA         CCTCTTAATTT GAAA GAATTAAGAGG          TTTTCCTTTACCCGG  90 35
 C1O54_00455  104853 ..  104865 +  -2.7  -3.68366   GACAAATGCACCTTC                TATGA TTT TCATG                TTACTTTTAGGATAA  52 377
 C1O54_00495  114377 ..  114387 +    -4  -3.14931   CGTACTGCCGGGGCA                 TGAT CGA ATCA                 TTCATCCGCCATGCA  46 48
 C1O54_00500  116060 ..  116073 +  -2.4  -4.51743   ATTCAACGGGCATTC               TGGA AAAGGC TCCA                TTTATTTGGTCATCC  62 65
 C1O54_00525  125008 ..  125028 +  -8.3  -3.36327   GTCTTGGAAGGCATA            TCTCATCGT CGG GCGATGAGG            TTGTAAATAGCCTGC  65 107
 C1O54_00570 NONE
 C1O54_00575  136033 ..  136059 +  -4.4  -3.84674   CCGGGAGATTTACCT         GTGTCTTCCT GAAGAAG GGGAGGGCAC         TTATTCTCGTGAACT  57 437
 C1O54_00585  136920 ..  136949 + -12.9  -4.54727   CCATCCTCTTTCATA       CCGCAAGTTGCTGG TTT CCAGCT-CTTGCGG       TTTTCGTTTGCCGCC 100 372
 C1O54_00595  139406 ..  139422 +  -2.1  -3.57462   AGGAATTGCTCCGGA              CGCCTGC ATC GCAGAGG              TTTCCCCATGGCGTC  48 356
         kbl NONE
 C1O54_00610  143774 ..  143795 +  -2.1  -3.86524   ATTCCAACAGCTCCC           TGACGCCGT ATCT ACGGCAGCG            TTTCTCCCCCGCTCT  53 23
 C1O54_00615  144801 ..  144811 +  -4.6  -3.69684   TTCCTTCTTCATTTT                 GCCT TCC GGGC                 TTGTTGCGTCCATTT  56 117
 C1O54_00620 NONE
 C1O54_00625  148692 ..  148717 +  -2.6  -4.57569   TTCAAATTCACCTGG         GGGTTTGATC CATGAC GATAAAATCC          TTTTTCCCCACATAC  62 350
 C1O54_00645 NONE
 C1O54_00650  152219 ..  152233 +   -10   -2.7458   GAATCTTTTTTATGC               CATCCC CGC GGGATG               ATTCTGGATTTTTTC  65 67
        thiS  152481 ..  152496 +  -3.2  -3.86524   TCTCCATCGTCGCCG              GCGG CTAGGGTT CCGC               TTTCTGGAACAGTCT  54 18
 C1O54_00660  154592 ..  154607 +    -9  -3.21099   AAGGGGCAGAAACTC              TCCCTG GCAA CAGGGA               TCATTTTATCCTGTC  67 185
 C1O54_00665 NONE
 C1O54_00670  156977 ..  156996 +  -3.6  -4.57569   AGCGGCAGCCTCTCC            GGAACAGA ATCG TTTGTTTC             TTTTTCCCCCAATCG  66 289
 C1O54_00675  157448 ..  157459 +  -4.4  -3.18264   GAGGGATTACCTTTT                GCAA CGGT TTGC                 TTCATAAATAGAAGC  48 7
 C1O54_00680  157777 ..  157799 + -15.6  -5.69262   TTTTCGCCTGATTCA           GGCTCCGGAT CCG GTCCGGAGCC           TTTTTATTTTTCTCC 100 52
 C1O54_00720 NONE
 C1O54_00725  164930 ..  164942 +  -4.9  -3.14211   TAAAGGCATGGCCCA                TTCAT GCC ATGAA                TTGCTGAAAAAAGAT  48 6
 C1O54_00730 NONE
 C1O54_00735  166190 ..  166202 +  -3.4  -4.94902   TGAATCCAGAAAGCT                CGTT CTTTC AACG                TTTTTCTCCTCCTTG  73 346
 C1O54_00740 NONE
 C1O54_00745 NONE
 C1O54_00750 NONE
 C1O54_00755  171573 ..  171592 +  -3.6  -3.85698   GACAGGGCAGCAAGG            GAATGACT GAAG AATCATTC             TTTGTACCCCCCACG  57 108
 C1O54_00780  178400 ..  178414 +  -4.2  -3.01712   AGGCCGTAAACCCGT               TCCGGA TCA TCCTGA               TATTGGGGACGGGGA  46 168
 C1O54_00830 NONE
 C1O54_00835 NONE
 C1O54_00840 NONE
 C1O54_00845 NONE
 C1O54_00850  191499 ..  191520 +  -4.3  -4.19953   ATGCCTGGTTTCCAT           GCCCCTTTC CGCG GAACCGGGC            TTTTAGGCTTGCCTG  63 103
 C1O54_00855  193270 ..  193301 +  -4.3  -2.80492   CCCTCAGACAGCCCC      GCGCC-CCCGTCCG CGGAC CGGAAGGACGGTGC      TCATTAATCGTCATC  44 470
 C1O54_00865  195551 ..  195574 + -13.9  -4.13767   CCCGCACATAAAAAA          CCGGAGGGA TTATTT TCCCTCCGG           TTTTCGGATACGGCC 100 122
 C1O54_00875  198689 ..  198721 + -14.9  -4.86731   CCTTCCTTTTCCGGA      AAACCGGCTTCCCCT GAC AAGGGAAGCCGGTTA      TTTTCTTTACGGAGA 100 52
 C1O54_00880  200898 ..  200909 +  -5.8  -3.68351   GATCCGCCGCTGGAA                CAGG GCTC CCTG                 TTTGACTCCTGAAAC  62 2
 C1O54_00885  201102 ..  201136 + -15.1  -4.37886   ACAAGCGGCTCCATC     ATAACCCGCTCAAGG TCAAT CCTTGAGCGGGTTGC     TTTTATGAGGCGTGC 100 28
 C1O54_00890 NONE
 C1O54_00895  202108 ..  202139 + -11.6  -3.90291   CCGGATGCCATGAAA      GAGCCTCCGTGC AAACATCC GCACGGAAGCTC       TTTCATTAACAGGAT  84 118
 C1O54_00910 NONE
 C1O54_00915 NONE
 C1O54_00920 NONE
 C1O54_00925 NONE
 C1O54_00930  209405 ..  209418 +  -3.8  -5.10461   GCAGGTTTCCCACAC               CTCC CCGGCA GGAG                TTTTTCTTCCCTCCC  78 44
 C1O54_00940  211367 ..  211380 +  -4.5  -3.90048   GTTCATCATCGGAAT               GCC-GG TAG CCAGGC               TCTTTTTGGAGCCGC  59 197
 C1O54_00990  220788 ..  220815 + -15.7   -4.4267   GTAGGCCCCCTCAAA        GCCGGACATTG AATTTC CAATGTCCGGC         TTTTCCGTTTTCAGC 100 56
 C1O54_00995  222119 ..  222134 +  -6.8   -2.6914   TTTTTCTATCGTGCT              GGC-GCC CCC GGCCGCC              CTTATATAAAAACTC  50 198
 C1O54_01045 NONE
 C1O54_01050  237004 ..  237014 +  -6.8  -3.16683   TCCTCAACTCGTTCT                 TCCC CAT GGGA                 TTCATGAGATAGCCT  56 3
 C1O54_01055 NONE
 C1O54_01060  238971 ..  238986 +  -3.3  -4.56597   TGTGAGAGGCGAAAA              CATGT AAGTCG ACATG               TTTTTCAACAGGAAC  64 326
 C1O54_01065  239371 ..  239395 + -17.2  -2.73542   TCTCATCTCATTCCG          CGCCATGCGC GCCGA GCGCATGGCG          TCCTTCCCCCTTCAA  95 44
 C1O54_01070  239860 ..  239870 +  -4.6  -2.56596   AGAAAAGCTCGCACT                 CCTG ATG CGGG                 TAGCTTCCTCCCGGC  44 21
 C1O54_01075  240516 ..  240546 +  -4.1  -4.48333   ATAGAAATCGGTTCC       CAGACATTTTTTG CTGGT CAAAAAAGCTCTG       TTTTCGTTAATATGT  66 333
 C1O54_01080 NONE
 C1O54_01085 NONE
 C1O54_01090  243957 ..  243969 +  -2.6  -4.18018   TCCGGCTTTCAGACC                GGGG CGTTC CTCC                TTTTCCGTAAAAGCC  57 92
 C1O54_01100 NONE
 C1O54_01105  245884 ..  245896 +  -3.3  -3.54459   CTGGACTAATTCAAA                GGGAG TTG CTACC                TTTCGGGGCGGTTCC  49 83
        kdsB NONE
        pyrG  248305 ..  248338 + -16.9  -3.81488   CTTCATCAAGCCCGG     GGCCTTTTCCGGAAT TTCC ATTCCAGAAAAGGCC      TTCTCTTTCCAGGCA 100 44
 C1O54_01120  250271 ..  250287 +  -7.9  -3.02511   CATGTTGACCTGCCG              GGCCGGA GTT TCCGGGC              TGTTCACCGGATCCA  56 381
 C1O54_01130  257346 ..  257376 + -16.9  -4.54047   TTTCCATTCCGTTTC       ACGCCGCTTTCCC TTTCC GGGAAAGCGGCGC       TTTTGTGTCCGGTAG 100 54
 C1O54_01135  258524 ..  258539 + -10.4  -5.73978   GATTATTCAGAAAAA              CGGGCA TTTC TGCCCG               TTTTTTATTTCTCGT 100 90
 C1O54_01150 NONE
 C1O54_01155  265571 ..  265599 +  -3.8  -3.67597   CAGGCAGAATATGGC       GCACCA-GCGG CACCGTAA CCGCATGGGGC        TTGTTGGATAAAACG  52 512
 C1O54_01180 NONE
 C1O54_01185 NONE
 C1O54_01190 NONE
 C1O54_01195  275690 ..  275706 +  -2.2  -3.03701   TAATGCCTTTATTTT              GTTCTC TGTAT GCGAAC              TATGATTTGCTGGGG  42 114
 C1O54_01200  277489 ..  277511 +  -3.5  -3.76174   TATTCGCAGTCCAAT           GGATCATAT CATTT ATATTATCC           TCTTTTGCTGAATTT  54 312
 C1O54_01205  278100 ..  278124 +    -3  -3.29544   AATTACTGGCTGCTC          GTTATATTTT AAGAA AAAATGTGAC          TATATTCTTCCTGGT  46 66
 C1O54_01210  278804 ..  278815 +    -3  -3.93875   TCGTCATTTTAATTC                GTAA TTGT TTAC                 TCTTGTTTTTTCATC  54 124
 C1O54_01215 NONE
 C1O54_01225  281645 ..  281657 +  -9.1  -3.14132   CTTCGGCAGGAACAA                CGGAG TTT CTCCG                TTGCTGAAAGAAACA  65 76
 C1O54_01230 NONE
 C1O54_01235 NONE
 C1O54_01240 NONE
 C1O54_01245  286685 ..  286706 +  -4.4  -3.23708   GCCGCACCGCAGGGT           TGACCGGA ACCGGG TCCGGTGA            TACTTTTTCCGGGCA  50 61
 C1O54_01250 NONE
 C1O54_01255 NONE
 C1O54_01260 NONE
 C1O54_01265 NONE
 C1O54_01270 NONE
 C1O54_01275  294429 ..  294443 +  -3.5  -3.35679   AAAGGCCCTGATGCA               GGGGA CTGTT TCTCC               TTGTCCATGCAAGGC  50 30
 C1O54_01280 NONE
 C1O54_01285  297110 ..  297145 +  -4.6  -3.39895   GAATACGCGTTCCAC    GCCTTCACCGTAGGAA ATTT TGCGGACGGTGAAAGC     TTCATTGATGCCGGA  52 285
         mce NONE
 C1O54_01305 NONE
 C1O54_01310 NONE
 C1O54_01315 NONE
 C1O54_01320 NONE
 C1O54_01325  304659 ..  304676 +  -4.8  -5.00234   AGAATGAGCCTACCG             CTCCGT TTTTAC ACGGGG              TTTCTTTCTTTTTTC  76 34
 C1O54_01330  306261 ..  306287 + -15.9  -4.90477   CACGTTAACCCCTCA         GGACCGCTTCC GCAAA GGGAGCGGTCC         TTTTCCTTTTTTCTA 100 78
 C1O54_01335 NONE
 C1O54_01340  307667 ..  307685 +    -3   -4.7497   CCGTCACCGCAATAT             CCGATTTG GGC CGGAGCGG             TTTTTCCTCAATGGA  70 357
 C1O54_01360  311224 ..  311238 +  -3.4  -2.67423   ATCACCAGAGCAACA               GGCCGG AAA TCGGCA               GTTCATCTTGTTCCC  40 86
 C1O54_01365  313249 ..  313267 +  -3.1  -3.89346   AGAACATGTTCACCA             TCTGGTC CACCT GACTGGA             TTTGTCCAATAAAAA  56 280
 C1O54_01380  318746 ..  318772 +   -18  -3.60048   TTGGAAAAATATATT         GAGGGAGGCGGG TAT CCCGCCTCCCTG         CTTTTTTCCCGCCCG 100 80
 C1O54_01390 NONE
 C1O54_01395 NONE
 C1O54_01400  327106 ..  327117 +  -7.2  -3.02043   GCGGGGCCACCAGGG                CGGC GCTG GCCG                 TATTGGAACAGAATT  56 314
 C1O54_01410  328621 ..  328642 +  -3.5  -4.56775   GGTTTCAGTCTTTTT           GGCCGGGGC CTTG GCCGCAGTC            TTTTTGGCGGGAGCT  66 160
 C1O54_01425  330823 ..  330848 +  -5.4  -3.85698   CCCAGCAACCCCATG         GCAGCCGGATG TTCCT CATCCGCC-GC         TTTGTGCCACAGCCC  59 491
 C1O54_01435  332585 ..  332614 +  -4.2  -2.94232   ATGCGGGGAAATCCG       GTAAACGGGCTG CAACAC CAGTCCGTACAC        ATTCTTTGCCCCGGG  46 327
 C1O54_01465  337396 ..  337421 + -13.3  -5.03314   CCGGGACATAAACAA         GGGCCA-CTCCG TTC CGGGGATGGCCC         TTTTTTGGAGGTAAA 100 53
         def  340917 ..  340927 +  -6.8  -2.71712   CCTTCAGGCAGGACG                 GAGC GCC GCTC                 ATTTCCAGGCACACG  50 439
 C1O54_01495  343600 ..  343634 + -19.4  -4.57073   CTTGTCCCTCTTACG     CAACGGCCGCCTTTCT TTG GGAAAGGCGGCCGTTC     TTTTTGAAACCGGTG 100 49
 C1O54_01530  349835 ..  349864 +  -5.6  -3.61398   CCTATGGCTCCCTGT       GCTTCGCGGCTG CACACA TACCCGCGGGGC        TTGTTCAACAGCACC  56 473
 C1O54_01570  356002 ..  356013 +  -5.8  -3.06183   ATCCATGTAGATGCC                GGGA GAGC TCCC                 TTCAATAGGCATCGC  52 136
 C1O54_01580  356627 ..  356642 + -11.8   -4.9445   TCGACCAATTTCCAA              GCCGCC TCCG GGCGGC               TTTTTGATTACTTAT 100 34
 C1O54_01595  359934 ..  359964 +  -4.7  -4.37658   CAACGTTTTTCCTTT      TCTTCCGAGGACGG CTGA CTG-CCTGGGAGGA       TTTTATCCAAAGCTT  66 57
 C1O54_01675  374670 ..  374683 +  -3.7  -3.17763   GCCGCAAACTTTTTA               CGCAC AGAT GAGCG                TTCGTAAAATATCGG  46 234
 C1O54_01680  375300 ..  375314 +  -7.8  -4.04071   GGTTCTCCGCCAGCC               TGGCCT TCC GGGCCA               TTCTTCTTAATCTTT  71 136
 C1O54_01685  376444 ..  376473 +  -9.3  -5.07652   CACTGAACACAGAAA       CGCCCCG-GACG AGCAAAA CGTTGCGGGGCG       TTTTCTTTTGGGCGA 100 48
 C1O54_01710  379831 ..  379849 +  -4.4  -3.76224   AACGGCAGACACGCG             GCGGGCCA GTT TCGCCAGC             TTTGATAACTGGCCA  57 156
 C1O54_01795  395588 ..  395605 +  -5.5   -3.1577   GGCATCTGGGAACAG             CTCTGGC TGGA GCTGGAG              TATTAACTCTTCCAT  51 2
        msrB  396271 ..  396306 +  -8.3  -3.60627   AATATCCGGCCGCCC   TTCCGT-GCG-CTGCCG GATG CGGCCGCCGCGGCGGAA    TTTACCCTGAAATCC  67 59
        fabF  397782 ..  397827 + -24.9  -5.37593   GGCCTCTCCTTTCCG GCGGAAGCGCTGATGTTTGCGG CCA CCGCAGCCATC-GCGCTTCCGC TTTTTTCATTTAAAA 100 49
 C1O54_01810 NONE
 C1O54_01815  399139 ..  399163 +  -4.9  -5.60993   CCGGTCGCCCGGTTT          GAGCAGTTCCC TCA GGGAAGCGTTC          TTTTTTTCTACAAAA  91 268
 C1O54_01835  403443 ..  403469 + -15.1  -5.14563   CCGGCAATATTTCAA         GGCCGCTCCCC TCTCC GGGGAACGGCC         TTTTTTCATCCCCGC 100 50
 C1O54_01840  404590 ..  404609 +    -3  -3.50746   CCTCCGGAGAAAAAT            CAATAAAGA ATC TCTTT-TTG            CTTTCTTTTTGCCCC  49 20
 C1O54_01845 NONE
 C1O54_01850 NONE
 C1O54_01855  406377 ..  406396 +  -3.5  -3.28924   CCCTGTTCTTCCCTG            GCGTGCCT TGTAC GGGC-CGC            TTCTCCAAAAGCGTA  48 51
 C1O54_01860  406788 ..  406803 +  -6.8  -3.06696   GAAAAACGTTTCCCC              GGCAGCC ACA GGC-GCC              TGTCTTCCGAAGCCA  56 153
 C1O54_01865 NONE
 C1O54_01870  407948 ..  407962 +  -5.6  -3.78934   CATCTGGAGACCTTT               GAACGC ATG GCGTCC               TTCTTATCCGGCCAC  59 431
 C1O54_01880  409839 ..  409868 +  -7.9  -2.78505   TGAAGAATTTCACGT       CTTCTCCGCGTAT CGCC ATACGCGGAAAAA        TAATATTCCCTTGTC  54 511
 C1O54_01905  414804 ..  414829 + -19.1  -4.36914   TAACATAAATAAGAA         CCCTTGCCGGA ACCT TCCGGCAAGGG          TTTTCTCCGCCGGAA 100 54
 C1O54_01910 NONE
 C1O54_01915  416446 ..  416458 + -10.5  -3.83026   CGGCACTTCAACAGC                GCCCG CTG CGGGC                TTTCCTGTACAGGCA  82 76
 C1O54_01930  419289 ..  419334 + -15.4  -2.69545   CGTGCCATAAACACA TGCCGGGGCAGGACTCCGGC CCGCCC GCCGGAGTCCTGCCCTCCAA CTTCTCCTCTCTGCC  83 53
 C1O54_01935 NONE
        pstA  423464 ..  423475 +  -2.2  -3.30338   CTGCGCAAAAAATAC                GC-GG CCT CCAGC                TTCTAACCCCATTCT  44 8
        pstB NONE
 C1O54_01950  425470 ..  425484 +  -5.8  -3.63901   TAAAAACACAAATAA               TGAAAT AAT ATTTCA               TATTCTTTGATTCAT  59 512
        cysK NONE
 C1O54_01960 NONE
 C1O54_01965 NONE
 C1O54_01970 NONE
 C1O54_01975 NONE
 C1O54_01980 NONE
 C1O54_01985 NONE
 C1O54_01990  434257 ..  434294 +  -8.3  -3.25204   GCATAAACACCCGGA   GCCGTTTTTGCCGCGGA CGGC TCCGGGGCAAATCCTGC    TATCTTTGAAAATCA  64 43
 C1O54_02055 NONE
 C1O54_02060 NONE
 C1O54_02065 NONE
 C1O54_02070  464795 ..  464821 +    -3  -3.70446   TATTTTTGTTGACAA         TTCATCATCTTG TCG CCATATGATGGA         TTATATTAGGTATGG  52 144
 C1O54_02075 NONE
 C1O54_02080 NONE
 C1O54_02085  468628 ..  468650 +  -4.8  -2.83403   TTCTCCATATAATCA           TCTTCATCTG CCT CGGATGGAGC           CTTTCCTCCGCGGAG  45 117
 C1O54_02095  470647 ..  470657 +  -2.4  -4.59773   CTCCGGCTATCATGC                 GGGC ATG GGCC                 TTTTTCAGGATCAAA  65 145
 C1O54_02100  471527 ..  471552 +  -8.9  -3.32946   TGCATTTTTCAAAAA         GCCGTCCCCCA AAAA TGCGGAACGGC          TCTTCTGATTCGGAA  67 65
 C1O54_02110 NONE
 C1O54_02115  473486 ..  473497 +  -7.2  -3.59979   ATCTACTCGCAAAAC                GGGC ACGG GCCC                 TTTACCATGGCAACG  64 47
        trxB  474484 ..  474494 +  -6.8  -3.55622   GGGAAGGGCCGGAAT                 TCCC AGC GGGA                 TTTCCGGCCCTTCCC  62 52
 C1O54_02125  476005 ..  476020 +  -4.6  -4.89852   CAAAGGTAGGGTGCG              GGCATG CTTT CACGCC               TTTTTCTCGCTCTGG  74 123
 C1O54_02130  476727 ..  476751 + -14.3  -4.75309   CCTTTCCTTTAAAGA          CAGGCTCCCTA AAA TCGGGAGCCTG          TTTTGTTGCCTTTCA 100 55
 C1O54_02135  477620 ..  477646 + -10.9  -5.18355   CCCGTTTTTCAACAA         CTGTCCGGGGT GTAAA ATCTCGGACAG         TTTTTCATTTTTAAG 100 60
 C1O54_02140  478750 ..  478764 +  -5.7  -3.44848   AATCGCGGAATTGCT               GGTCA ACCGC TGACC               TGTTTCCTCCACACC  57 13
 C1O54_02145 NONE
        nadC NONE
        pdxH NONE
 C1O54_02160  482113 ..  482124 +    -3  -3.90291   TTACCTCTCAAATAA                TGTT CCGG AACA                 TTTCCTTGCCGCCCT  54 55
 C1O54_02175  486391 ..  486410 +  -3.5  -4.11484   AAAAGTCTCTTTTAA            GGTTTGG TATGTT CCGAGCC             TTTTGGCGCGTTCCC  59 68
 C1O54_02180  488552 ..  488576 +  -2.1  -3.01416   TTCTGTAAAGCAGGC          GGGCTTTTCTG GAA TAGAAAAACAC          TGTCTATCAATCATA  41 33
 C1O54_02185  488926 ..  488936 +  -2.4  -3.14132   AAGCGCCACACCATC                 CAGC ACG GCCG                 TTAATCCAGCCGCCA  42 11
        rnpA NONE
 C1O54_02195 NONE
 C1O54_02200  491595 ..  491620 + -11.8  -4.72272   CTTCCGCCTCTGCAA         GTGCGTCCGC CCCTCC GCGGCCGCAC          TTTTTCATGAAAAGG 100 56
 C1O54_02215  499392 ..  499406 +    -7  -3.33696   AAAAACTTTCCTCCG               GAGCCC GGC GGGCAC               TTAATTCCCCCGGCG  58 207
        carB NONE
 C1O54_02225  503882 ..  503920 +  -3.2  -4.82998   GGGAAAAATGCGTTA  TTTATGCCCGGAGCC-CA TGAAT TGCGGCTCCGGG-AGAGG  TTTCTTTTCATTTCA  70 90
         gmd NONE
 C1O54_02235 NONE
 C1O54_02240  507502 ..  507516 +    -7   -5.4505   CCCATACGGAGAAAG               GACGGC AAG GCCGCC               TTTTTTGTTACCGAC 100 45
 C1O54_02245  508869 ..  508892 + -16.8  -4.41494   GTCTTCCTCTCTCCA          TGCCCACAGG AAAC CCTGTGGGCA           TTTTGCTTGCCCGTC 100 54
 C1O54_02250  509890 ..  509908 +  -3.8  -2.80589   CAAAAAGAGCGAAGA             ATTCGGCA CAA TGCTGAAG             CTTTCACACTTTTTC  44 55
 C1O54_02255  510726 ..  510736 +  -6.8  -2.62184   TGGATTATTATTACC                 GCTG CAT CAGC                 TGATATCAGGCAACA  52 12
 C1O54_02295 NONE
 C1O54_02300  520119 ..  520142 +   -11  -4.07568   TCCTGCAACAAAAAA          GGAGCACTCC ACAG GGAGTACTCC           TTTTCCGAGAAAGAA  86 181
 C1O54_02315  521814 ..  521837 +   -11  -5.15969   CTTCTTTTGCAAAAA          CCTTCTCCGG CTTG CAGGAGAAGG           TTTTTTAGCTTACAG 100 56
 C1O54_02320 NONE
 C1O54_02325  524159 ..  524182 + -16.8  -3.14564   TCCTATCGAAAATAA          GAGCCTCGTC TTCC GACGAGGCTC           TTACTGAAAAACTGG 100 74
 C1O54_02345 NONE
 C1O54_02350  529033 ..  529043 +  -4.6  -2.69545   GGCTTGGGTCTCCCT                 CCCG GCA TGGG                 CTTCTAATCTGTCAC  44 8
 C1O54_02355  530122 ..  530132 +  -8.2  -3.21099   ATACCCCTTACAGCA                 CGGC AAC GCCG                 TTCCTCCTCAGGAAA  64 44
 C1O54_02375  534569 ..  534582 +  -3.7  -3.28791   AGCCAGAAATTACTT               CCCGC GGGA GCAGG                TTATCGGGAGAGCGT  48 47
 C1O54_02380  535395 ..  535409 +  -4.2  -4.86731   CCTAGGCCATCCAGT               GGAACG ACT CCTTCC               TTTTCTTTACAGGAG  74 36
 C1O54_02385  536432 ..  536463 + -18.8  -5.00616   CATGCCATCTTTCAA      GGAAGAAAGGGGGG AAAT CCCCCCCTTCTTCC       TTTTTTCGGCGAGGG 100 51
 C1O54_02430  545833 ..  545852 +  -3.6  -3.40878   CACCCAGGACAAGAA            CGCATT AAAAGGAG AATGCG             TCTTCTTCGCCTCAT  50 18
        aroB  547221 ..  547236 +  -4.7  -4.86385   GTAGTAATTACCCAA              TTCCC GGCACG GGGAA               TTTATTTTTACGGCT  74 218
 C1O54_02445 NONE
 C1O54_02450  550046 ..  550056 +  -2.4  -4.43879   GCTGCGTCATAAAAA                 GACC AAA GGGC                 TTTTCATTAAATGAT  62 100
 C1O54_02455  553350 ..  553361 +  -2.2  -3.53811   CCACAATTTGCTCCA                CGGT CGTA ATCG                 TTTCCACCACGTCGA  47 156
 C1O54_02475  558808 ..  558834 + -19.5  -4.67982   AAAACTCTTAAGGCA         GAGGCCGCCCT TTGAC AGGGCGGCCTC         TTTTATTCCATAGCA 100 61
 C1O54_02480  559829 ..  559855 + -12.4   -5.4505   CCTCCTTTAATGCCA         GCCGTTCCTT TCTTCCC AAGGAACGGC         TTTTTTATTGCGCCA 100 50
 C1O54_02500  563326 ..  563358 + -19.9  -4.86033   GCATCCCTTTTCCGG      CAGGCCCGGTTCCCA CCT TGGGGACCGGGCCTC      TTTTTGTCACCCTTT 100 48
 C1O54_02505  564449 ..  564460 +  -5.8  -3.53224   TGGTTTACTTCAGAA                GCAG ACGC CTGC                 TTTGAACGGGGCCTG  59 9
        argB NONE
 C1O54_02515  566105 ..  566119 +  -4.2  -4.09864   AATTCATCATGGGTC               CCGTCT AGC AGACAG               TTTTCCCGCCTGCAT  61 332
 C1O54_02525 NONE
        cbiQ NONE
 C1O54_02535 NONE
 C1O54_02555 NONE
 C1O54_02560  575243 ..  575256 +  -3.1  -2.75708   GCAGAAAACGCCGTT               TCGGA GCGC TCTGA                CCTTTTTTAACCCCC  41 12
 C1O54_02565 NONE
 C1O54_02570  577246 ..  577266 +  -6.7  -2.91264   GGCTCCGTACGTCAC            CATGCTCCC GCC GGGAGCCAG            TATATCCATCAGGCG  53 502
 C1O54_02580  578799 ..  578813 +  -4.2  -4.64334   TGCTTAAGTGAGGCA               CCTCCA AGT TGAAGG               TTTTATTGAAACATT  70 144
 C1O54_02585  579158 ..  579180 + -16.3   -5.7946   TCTCTTTTATAAGAA           CCGCTCCGG ATCTG CCGGAGCGG           TTTTTTTATTACACA 100 78
 C1O54_02605 NONE
 C1O54_02610  586138 ..  586151 +  -6.7  -3.25823   GCGGAGCGCGGTCCG               GTACC AGCA GGTAC                TTCATATCACCGGCC  56 356
 C1O54_02660 NONE
 C1O54_02685 NONE
 C1O54_02690 NONE
 C1O54_02695 NONE
 C1O54_02700  604755 ..  604773 +    -6  -2.94872   CCAGAAACCGGGAAA             TTCCCG CAGGGAA CGGGAA             TAGTTCTTGCCTGCC  52 4
 C1O54_02705 NONE
 C1O54_02710 NONE
 C1O54_02715  610076 ..  610109 +  -8.7  -3.31196   ACCACACGGCATCTC     CACCGCGGGCCGGACG AGC CCCCCGGCC-GCCGTG     TTCCTGTCCATTTCC  65 67
 C1O54_02730 NONE
 C1O54_02735  613628 ..  613640 +  -5.5  -3.83561   CCCGTGGTAAAAGCC                CAGCT CCC GGCTG                ATTTTTTTCCGCAGC  59 497
 C1O54_02765  619001 ..  619014 +  -4.5  -2.78816   ATGGTAACGGAAAAC               GCC-CC CGG GGAGGC               TATAATGGAAACTGC  45 34
 C1O54_02885 NONE
 C1O54_02890  647301 ..  647335 + -16.6  -3.72576   ACATCATAAAACCAG     TAAGGCCCTGCAAG CAGTTAA CTTGCAGGGCCTTG     TTTGGTGCGCCCGAA 100 450
 C1O54_02900  649055 ..  649074 + -10.6  -4.07568   TTCCTTGAGTTCCTC            CCCCAGCG AGTT CGCCGGGG             TTTTCACGACAGGGG  84 201
 C1O54_02905  651133 ..  651156 +    -4  -5.67529   TCCTGATATCTTCGA          TTATGTATCA TATA TAATACATAA           TTTTTGTTTTTGCTT  88 275
 C1O54_02920  654345 ..  654381 + -22.7  -3.10236   CTGTTGTTGTCCCTC    TGATGGAACTGTAAAGA AAT TCTTTACAGTTCCATCA    TATTGAAGTTCAATT 100 201
 C1O54_02935  658288 ..  658302 +  -5.8  -3.42124   AAACAACATAATATA               TTGATA TTA TATCAA               TTATAAATAATTTTC  57 392
 C1O54_02945  660609 ..  660622 +  -5.2  -3.16088   CCGCTCAGCTGACCC               GGGG CATTAC CCCC                ATTTTCATGACATGT  51 29
 C1O54_02950  662371 ..  662388 +  -4.1  -4.49311   CTTCGGAATCCCGTT             CCTCTTC CGGA GAAGAAG              TTTTCTCCTGCTGCT  66 316
        galE  666802 ..  666828 + -14.5  -4.63993   GCCACCCTCTTTTCC         GTCCTGCCATG CCCTC CATGGCAGGGC         TTGTTTTTTCAAATT 100 59
 C1O54_02980  668783 ..  668808 +  -7.7   -4.7629   CTGTACAGGGCAATT         CTCCC-CATTTT TCA GAAATGCGGGAG         TTTTTGCCTTGATGC  85 115
 C1O54_02985 NONE
 C1O54_02990 NONE
 C1O54_02995  672574 ..  672607 +  -9.5  -2.95409   GGTCCGGGATAAAAA     AGGCTTCCAGCCCTT ACGA AAGGACCGGAAGCCA      TGATTATGTTGCGTT  67 187
 C1O54_03005  676400 ..  676447 + -10.5  -2.68886   CCTGAACGCATTTTC CGTGCGCGG-GCGGAGGCCG CCACAATCA CGGCCTCCGCACCTTGCGGG TACCTTATTCCTTCA  68 36
 C1O54_03020  681077 ..  681091 +  -4.2  -5.15969   ATGTTCCGGCGTCAG               TTCCCG GAC CGGAAA               TTTTTTCAATTCCGG  81 417
 C1O54_03035 NONE
 C1O54_03040  688398 ..  688428 + -22.8  -4.57569   GCGATTATTTATTTA       TCATCCGGCATGCA ATC TGCATGCCGGATGA       TTTTTAGGGCAATAA 100 140
 C1O54_03045 NONE
 C1O54_03050  693164 ..  693191 + -17.2  -4.39002   TAAAAAAATTAATTT        TGTCACCTCTGA TTTT TCAGAGGTGACA         TTTTATAAAAAATTT 100 377
 C1O54_03055  696240 ..  696251 +    -3  -4.62302   AGAAGACTATGAACA                TCTA TCTG TAGA                 TTTTTACAAATGTTG  67 102
 C1O54_03065  698759 ..  698777 +  -2.4  -3.41051   TCCTTTTAGAAGAAA             TGATGGAC GTT GTCTATAA             TTCTACTGAAACTAC  46 7
 C1O54_03070  699333 ..  699348 + -10.4  -2.87527   GGTAGGTCTCCAATC              CGCACG GCGG CGTGCG               ATTTCCTCCTCGCTC  66 203
 C1O54_03080  701808 ..  701833 +  -2.5   -3.1247   CCGGGACGCCGCATC         CCGGAG-GAAAA GGC TTAACACTCCGG         TTCCATGTCGGCCAT  42 8
 C1O54_03085  703151 ..  703167 +  -2.3  -4.61873   CCTTTAAATAGAAGG              TTTGC TTGTTGC GCAAA              TTTTCCTTTCTGGAA  65 61
 C1O54_03120  710185 ..  710195 +  -8.2  -2.74192   TGGAGAAGGGGGAAT                 CCGG CTC CCGG                 TACTCTTCGCAAATA  57 195
 C1O54_03135 NONE
 C1O54_03140  715314 ..  715328 +   -10  -2.82516   ATGAACTGAAAACAT               TCAGGG ATT CCCTGA               TCTCCTCCTGCAAGA  65 383
 C1O54_03150 NONE
 C1O54_03155  719805 ..  719837 + -26.5  -4.03234   ATAACGTCCATATTG      GAGCGGGTGAAAGGG TAA CCCTTTCACCCGCTC      TTTATATCCCAGAAG 100 50
 C1O54_03180 NONE
        lipA  726730 ..  726740 +  -2.6  -3.56985   GAAAGGCTGGCGAAC                 TTTA GAA TAAA                 TCTTGATTTTTTATC  47 21
 C1O54_03190  728205 ..  728234 + -22.3  -5.22039   AAAGCTCTTTTTCCA       GCCGCGCCAATGA ACAT TCATTGGCGCGGC        TTTTTTGCATTTCCC 100 50
 C1O54_03195 NONE
 C1O54_03200 NONE
        feoB  731295 ..  731306 +    -3  -2.78463   AACTCTACTGAACAA                TATG GGAA CATA                 TATCATCGCCACCCT  41 59
 C1O54_03210  731507 ..  731541 + -14.5  -3.40403   CGGTTATCCCATTCA     GAACCTGCAAACC ATTTTCTGC GGTTTGCAGGTTC     TTCTGCTACGGCGCC  88 51
 C1O54_03230  734629 ..  734660 + -15.9  -5.34655   TGGACCGCCCCCAAC      GGGGGAAACGCAC GGAGAA GGGCGTTTCCCCC       TTTTCTTTTTCCTTA 100 99
 C1O54_03235  737239 ..  737254 +    -4  -3.78234   TGGAAAATTTTTCAT              GTATCA TGAT TGATGC               TTATTAGGTTTAACT  55 489
 C1O54_03245  737687 ..  737700 +  -2.3  -2.66316   TCAATCAGCGGAGAA               TTGCC TCCG GGCCA                TCATATCCTCCGGGC  39 109
 C1O54_03260 NONE
 C1O54_03265 NONE
 C1O54_03270 NONE
 C1O54_03275  744605 ..  744622 +  -3.3  -4.11484   GGCAGGCGGAAGACG             TCAGCGT AGAA ACGCAGG              TTTTCCAGCGTTCCA  58 366
 C1O54_03290  747932 ..  747950 + -13.1  -6.11229   AAACTGCCTTTCCAA             GCGCCGG TTTTT CCGGCGC             TTTTTTTATTTTCGT 100 53
 C1O54_03310  753310 ..  753330 +  -8.9  -2.52516   GCTTGCACCCTATCT            TGGCGAGGT GCA GCCGCGCCA            CTTCCTCATCCAGCA  58 264
 C1O54_03325  756788 ..  756801 +  -3.8  -3.28188   CCGCCTGGAAACCGT               GACG TACAGC CGTC                TTAATCCATTTTCCT  48 24
 C1O54_03335  757818 ..  757829 +  -2.2  -4.56914   AACCGTCTATGCTAT                TCGC AGTA GTGA                 TTTTCCTTTCCGTGG  62 46
 C1O54_03340  758484 ..  758498 +  -5.6  -2.71712   GATGAAGCGCATTTT               TCCGGT CAA ACCGGC               CTTTGGGAGAAAAAA  48 54
 C1O54_03345 NONE
 C1O54_03350 NONE
 C1O54_03355  761653 ..  761682 +  -2.8  -5.18866   TTAAGGGCGTTTCCT       GCGGTACGCTG CCTTTAATA CGGCG-GCCGC       TTTTATTTGTTTCCG  76 62
 C1O54_03360 NONE
 C1O54_03365 NONE
 C1O54_03370  767762 ..  767795 + -14.6  -4.56597   TTCAGGACTCCGGCG     GCGGGACCGGGG AGAGGATGAG CCCCGGTTCCGC      TTTTTACAGCAACAG 100 45
 C1O54_03375  768890 ..  768901 +  -7.2  -3.06796   AAATAAGGATTAACA                CCGG CAGC CCGG                 TTACATCCGGTAAGC  59 414
         tig  775691 ..  775725 + -12.9  -4.35581   ACAAAACACCTTACC    AGGGGGAGTTGGCGCA CACA TGC-CCGACTCCCCCG     TTTTGCATCTTTTGG 100 53
 C1O54_03410 NONE
 C1O54_03415 NONE
        tsaD  779095 ..  779121 +  -9.4  -3.63305   GGAGGATGCTATTTA         TCCGCTAGAACC GCA GGTTTGGGCGGA         TTTACGACTTCTCTA  70 162
 C1O54_03425 NONE
         tuf  780509 ..  780536 + -17.1  -3.53012   CTACATCAGGTTTAA        TGAGGGGGCCT CCCCGC AGGCCCCCTCA         TTTCCCACGAAAGAA 100 66
 C1O54_03435 NONE
 C1O54_03440 NONE
        nusG NONE
        rplK NONE
 C1O54_03455 NONE
        rplJ  783381 ..  783391 +  -6.8  -3.02144   CCGGAGAACTGAAAT                 GCCA AGT TGGC                 TCTTGGCGCGACTCG  54 135
 C1O54_03465  783819 ..  783855 + -23.3  -3.27923   AGCTTTTTACTTCCC    GCGCAACAGGAGAAAAG CCG TTTTTCTCCTGTTGCGC    TTCCTCGTCTTCACA 100 40
        rpoB NONE
        rpoC  792240 ..  792267 + -18.4  -5.48787   CACCCACACTTCAAG        GGCCGCTCCCCG TTTC CGGGGGGCGGTC         TTTTTTATGTCTTCT 100 52
        lepA  802098 ..  802122 +  -4.3  -3.05596   GTTCATCAAGGTGCT          GAAAACGGG GGATTAA CCCATTTTC          TTCCCTCAAGGCATC  48 10
 C1O54_03500  803543 ..  803561 +  -6.7  -4.25458   ACGGCTTTTCCCCTG            CCG-TCCG GCTG CGGAACGG             TTTATTCATGGGCTT  71 41
 C1O54_03505 NONE
 C1O54_03510  807212 ..  807243 + -14.5  -4.66535   TCTGATTTCTTCAAA     GCCGGGGA-C-GCGG ACAA CCGCGGATCCCCGGC      TTTCTTTTCCCGCTT 100 64
 C1O54_03515 NONE
 C1O54_03520 NONE
 C1O54_03525  810401 ..  810443 + -10.6  -3.57792   TCCAGCAGCTCCAGT TTCTCCTGAAGAGGACGC AGCAGGC GCGTCTTCTTCTGGCGGA TTTCCGCCTCCATGC  74 462
 C1O54_03540  813808 ..  813825 +  -5.5  -2.83822   AAGTGTTTACATAAT             TTCCACC GCGG GGCGGAA              TCATTGTGCCCTCAC  48 122
 C1O54_03545 NONE
 C1O54_03550 NONE
 C1O54_03555  816427 ..  816447 +  -2.5   -5.1356   ATGACGCCGGCAAGA            AACCGGA CCCATCT TCCGGTG            TTTTTCTTCATAGAA  74 37
 C1O54_03560  816932 ..  816960 +  -8.9  -3.44444   CCGGACGCCAGGCGC       GGCTCCCG-TCT CCAGAC AGATCGGGGGCC        TTCCTATCTTTCTCC  69 67
 C1O54_03565 NONE
 C1O54_03570 NONE
 C1O54_03575  818994 ..  819012 +  -5.2  -4.16279   TCAAGCGCTTGAATG             CCGTCCCT CAC ACGGATGG             TTTTCCCGTCGTCTG  64 251
 C1O54_03625 NONE
 C1O54_03630 NONE
 C1O54_03635  833234 ..  833249 +  -7.5  -2.71712   GTGCGTGCTGGCTCT              GGCGG CAAATT CCGCC               CTTTCCAGCCAGGAA  56 97
 C1O54_03645  835699 ..  835720 +  -2.9  -3.05844   ACGGACCTCTGACCC           TGACCGCAC GGCT GTTCCGTCA            TCTTGGCATCCAGCC  43 178
 C1O54_03660 NONE
        raiA  837216 ..  837247 +   -13  -4.57353   ATAACGCATCAAAAA      GAGCAGGACTTCAG AAAC CGGGGGTCCTGCTC       TTTTCTGTAATGCCG 100 75
 C1O54_03675  840195 ..  840229 +  -2.9  -4.93661   TTTTTCCTTGCCGTG    GATTTCATCCTGCCTC AAAA GAA-CAGGATGAAGGC     TTTTCTTGTTCCTCT  73 62
 C1O54_03680  840839 ..  840851 +  -4.8  -2.89602   TCAAGCTTGCCGGAA                CCGT GAAAA ACGG                GTTTACTGTGGGCAG  47 125
        fabG NONE
 C1O54_03690  843107 ..  843124 +  -6.3  -2.77344   GAATATGAAGTGCTG             GGC-ATGG GGC CCATTGCC             GTTCTTCCGGAATAC  51 289
 C1O54_03705 NONE
 C1O54_03710  847649 ..  847662 +  -3.9  -3.52472   TGAAAAGAAAAAGGA               TTGTT TGAT AACAA                TTAATTTAAACATAT  52 439
 C1O54_03715  849254 ..  849264 +  -2.6  -4.18018   CCTAGTAATCATCTA                 TATT TCC AATA                 TTTTAGATACAAGGC  57 376
 C1O54_03725  850753 ..  850765 +  -6.3  -4.44797   CGCGCCGGGCTTCCC                GGAAA ACA TTTCC                TTTTCCTCTTCCTCC  73 53
 C1O54_03740  853122 ..  853134 +  -6.9  -4.08394   GCGCATTGTCTTCCG                GCCTG AAC CGGGC                TTTTGACGACCATAT  69 309
 C1O54_03745 NONE
 C1O54_03750 NONE
 C1O54_03755 NONE
 C1O54_03760 NONE
 C1O54_03765 NONE
        mraY NONE
        murD NONE
 C1O54_03780 NONE
 C1O54_03785 NONE
        murG NONE
 C1O54_03795  867618 ..  867630 +  -4.7  -4.11484   CCAGGTCATCGGAGA                CCGGG ACC CCCAG                TTTTAACCCATTCAC  61 7
 C1O54_03800 NONE
 C1O54_03805 NONE
        recA  870895 ..  870918 + -15.3  -5.36441   TACTGCCATTTCAGG          GCGGCTCCC CTTCCC GGGAGCCGC           TTTTTTCTCTCCGGA 100 62
 C1O54_03815  872022 ..  872034 +  -6.2  -2.55213   CCTGGGCCAGCAAGT                GCGC AGAAC GCGC                TGAGTTCCCTAACTG  49 10
 C1O54_03820  872850 ..  872864 +  -2.1   -2.7898   ATGTAAGACACAGAC               CGTGT CAGCA ATACG               TCCTTGCATCTTGAC  39 164
        leuC NONE
 C1O54_03830  874940 ..  874951 +  -5.8  -2.73542   GAACTGCCCCAGGTC                GCAG CCTC CTGC                 TGATTCAGCATTCAC  51 11
 C1O54_03835 NONE
 C1O54_03840 NONE
 C1O54_03845 NONE
 C1O54_03850 NONE
        aroB  880753 ..  880777 +    -7  -3.13403   CGTTTACAGACGCGG          CACGGCGGCG AGAAG CGCCCGCGTG          TATTCGTGGGCAGGG  56 254
 C1O54_03880  885527 ..  885537 +  -2.4  -3.10715   ACGCCTTCAGTCCAT                 CCAC CAG GCGG                 TTCAGTCATGATGAA  42 4
 C1O54_03885  886032 ..  886045 +  -2.5  -2.85996   ACAAGTAACCATTCC               TTTTT ATGA AAAAA                CTTTCCTCCCTGCTG  39 33
 C1O54_03890 NONE
        lptB NONE
 C1O54_03900 NONE
         mpl  890133 ..  890143 +  -2.4  -4.46404   CCTGGTCGTAGGCAG                 CCTG GCC CTGG                 TTTTCCTGTTCCTTG  62 106
 C1O54_03910 NONE
 C1O54_03915  893477 ..  893496 +  -6.4  -2.62933   CTGGTGGAAGAGTGG            GAGGTGGA ATAA TCCAGCTC             TCCTCTCCCGGGTTG  50 14
 C1O54_03920  894193 ..  894216 +  -2.6  -4.62336   CAAAAAAATACTAAA          TTAAATAATT TCTA AATAATTTAA           TTTTTCCAATAAAAT  65 524
 C1O54_03925  897672 ..  897698 + -13.8  -4.29981   CTTGGTTATGGTAGG         CCCTTTCCCG ACCCGCG CGGGAAAGGG         TTTTCCGTATGTTTC 100 70
 C1O54_03930 NONE
 C1O54_03935  898707 ..  898736 + -10.8  -5.07652   GCACGACTGACTTCA       CCCCGGCTTATTC CTAAA GGA-AAGCCGGGG       TTTTCTTTTGCCGCC 100 49
 C1O54_03965 NONE
 C1O54_03970 NONE
 C1O54_03975 NONE
 C1O54_03980 NONE
 C1O54_03985  908782 ..  908801 +  -4.8  -4.35483   TTCCATCCGCTGCCC            GCACTGCG GAAA CGCCGGGC             TTTATTCTGCTCCGC  66 251
 C1O54_03990  909328 ..  909343 +  -4.6  -3.71848   AGGATCGTCCGGATA              AGGAGC ATAA GCTCCG               TTATTGGTGGAAACC  57 304
 C1O54_04000 NONE
 C1O54_04005  911964 ..  911979 +  -3.2  -4.11216   CTCTCTTTGCTTTCT              CC-GCTG CTG CGGCAGG              TTTTCCCGGTAAGGC  56 309
 C1O54_04010  913140 ..  913150 +  -2.4  -3.65542   AGCTCAAATAAGCCA                 GGCC CCT GCCC                 TCTTTTCCGGCTCCG  50 30
 C1O54_04015 NONE
 C1O54_04020 NONE
 C1O54_04025  916347 ..  916383 + -21.7  -4.15703   AACCTGCTTTTCAGG    CCGCCCGCTTCCTTC ATCTCCG GAGGGAAGCGGGCGG    TTCTTATTTCTGCCA 100 63
 C1O54_04030  917551 ..  917563 +  -5.5  -2.70932   AAGGAAGCACCCGCC                TTCCC TCA GGGAG                TCGTTGACGGACGGC  47 73
 C1O54_04035  918784 ..  918806 +    -9  -3.23452   AGCGCGGGCATCAAT           GCCGCCGGAC ATC GTGCGGCCGC           TTCCCTTGTCAGCGT  65 516
 C1O54_04050  923404 ..  923419 +    -9  -3.15999   CGAGGAAAAAACCTG              GGAAGC GCCG GCTTCC               TTCAGTATATCCACG  63 291
 C1O54_04060  926193 ..  926205 +  -4.9  -2.60496   TTTAAAACATCCGCG                CTTTT TCC AAAAG                ATATTTGAAAAACCG  44 48
 C1O54_04070  928370 ..  928403 +   -14  -4.63048   TCAAATAAATTCCCC     GGCTTCCGGAAAGG CAGGTT CTTTTTCGGAAGCC      TTTATTCTTTATGGA 100 33
 C1O54_04075 NONE
 C1O54_04080  929958 ..  929974 +  -6.5  -4.36914   TTCTGCATTAAAAGG              CCGGG AAAAAGC CCCGG              TTTTCTCCCGCACCC  74 30
 C1O54_04090 NONE
 C1O54_04095 NONE
        lysA  934689 ..  934705 +  -3.5  -2.94232   CAGAATTTTCAAGTC              CGCCGAG CCA CGCGGAG              CTTCTTTCCGGAGAC  45 131
 C1O54_04105  935938 ..  935965 + -18.6  -5.24129   ACGAATTTGATGCCA        TGCCCGGTTTCT TTTA AGAAACCGGGCA         TTTTTTCTGGAAAAA 100 55
        ilvE  939235 ..  939258 +   -16  -5.46629   TTGGACCAACGAAAA          CGGCTCCGTC ATCC GGCGGAGCCG           TTTTTTTGCGCTATT 100 58
 C1O54_04125  941225 ..  941239 +    -5  -3.98826   AGGCAGCAATTCACC               CGTTAC CCT GTAATG               TTTGTAGGTTAATCC  63 149
 C1O54_04135  941920 ..  941931 +  -5.8  -4.20084   AAGCAATTGCAGTGG                CCTC CAGG GAGG                 TTTTCCATAAGTAAT  68 39
 C1O54_04140  942554 ..  942567 +  -6.7   -2.5032   CACCGTGGAAAAACC               GTGCA GCCC TGCAC                ATGTCTTGCGTTTTG  52 101
 C1O54_04145 NONE
 C1O54_04150  944884 ..  944908 +  -7.7  -5.57729   TCTATTCCACCACCT          CCGGGGACGGC TAT GCCGTCCCTTC          TTTTTTATATTATTT 100 59
 C1O54_04155  946100 ..  946114 +  -6.4  -3.14132   AAACACCTCCTGCCA               GCTTTC CAT GGAAGC               TTCCTGGCCGCCCAG  52 120
 C1O54_04190 NONE
 C1O54_04195  959704 ..  959720 +  -5.9  -3.54424   GGCTTCCATTGAGTG              GGAATGA AGA TTATTCC              TTTGGAAACATCGGA  59 19
 C1O54_04200  962754 ..  962764 +  -5.4  -3.11192   GTCATCCGAAACAGC                 TTCC ACA GGAA                 TTGCATCATCATATA  51 42
 C1O54_04205 NONE
 C1O54_04210 NONE
 C1O54_04215 NONE
 C1O54_04220  964912 ..  964939 +    -2  -2.63644   CTTCTATAACCATAT        TCACCTGATTCCA TCT TGGAA-CAGGAAA        TAAATTCCTGTTTTT  39 55
 C1O54_04225  965960 ..  965970 +  -5.4  -3.65991   CTCTTGGTTCCACCT                 TGGT CGT ACCA                 TTGTATTAACGGGAT  59 6
 C1O54_04230  966856 ..  966872 +  -5.8  -3.53224   CACGCTTACGCTTCC              TGCCGT TTGGC ACGGCG              TTTGCGGACAGCGTC  59 157
 C1O54_04275  974151 ..  974180 +  -6.3  -3.02144   AAAGCCGCTTCCACC       G-CCTGGCGTGGCG TGA CGCCGCGCCAAAAC       TGTTCCCGGGGATCG  51 386
 C1O54_04300  979383 ..  979397 +  -5.6   -4.6468   CTTATCCTCCCATTC               CGGATC AAT GAACCG               TTTTCTCTCATTTGC  73 46
 C1O54_04305  980480 ..  980490 +  -8.2  -2.74501   ACAGTTATGCTGTCA                 CCGG AAT CCGG                 CTTTCCCCCATTCAT  59 309
 C1O54_04310 NONE
 C1O54_04315 NONE
 C1O54_04320 NONE
 C1O54_04325  986574 ..  986589 +    -6  -3.21416   CCGCTTTGCGGGAAG              CGTGCC TCTT GGCCCG               TTCCTCCTCCCGCTG  55 212
 C1O54_04365  993967 ..  993980 +  -2.3  -4.96106   CGCACCAGCATCACC               ACTGG TTGT CCAGG                TTTTTGGTATTTATC  70 402
 C1O54_04380 NONE
 C1O54_04385  997885 ..  997915 +  -2.3  -3.34715   TGATCAACCGCGTCA       CGCTCCAGTCACG CTGAA CGTGTCCGGCGGG       TATTTCACGGAAATA  46 9
 C1O54_04390  999219 ..  999236 +    -4  -2.66695   CCCCGGATAGAGCCA             GGCCGG ATACTG CCGGCG              GTCTTTCATGGAAAA  43 63
 C1O54_04395 1001093 .. 1001106 +  -5.2  -3.53811   TGGTTCCACGCGCAG               GGCG GGAACG CGCC                TTTCCGGAAGCTGGG  54 465
 C1O54_04405 1001615 .. 1001651 +  -3.7  -5.42862   AGGAAAGCGAAACTG    GAACAGGAAGAAAGCTG ATT CCGTTTTCTTTCATTTC    TTTTTTTCCGCCTGT  85 8
 C1O54_04410 1003222 .. 1003248 +  -6.5   -3.2827   AATCAGGGCATTGCT         CCATTTCCCGG TTGTC CCGGCAAAAGG         TTCCTGCTTGAATAG  58 152
 C1O54_04415 1004584 .. 1004603 +    -5  -3.31601   CCAGCATCTTTTCCA            GGTAACTG CTAG CAATTACC             ATTTTCTAACTTTTC  53 319
 C1O54_04425 1005797 .. 1005820 +   -11   -3.0782   CGGTGAATTAACTGA          CCTCCTTCCT TTCG GGGAAGGGGG           TATATTCAGAACTTA  74 50
 C1O54_04435 1008258 .. 1008295 +  -2.6  -3.21276   CCGCACTGTTCACAC   GGCCGGAAACAGATGA ATGCGG TCATCTGTGGACAGCC    TGTTCTGGAACAGGC  44 510
        leuB 1012883 .. 1012908 +  -4.6  -4.64024   ACGCCTTTCCTCCGG         GGGGAGCGGT ACCGCC ACCCCTCCGC          TTTCTTCTTTCATTT  70 86
 C1O54_04475 1014039 .. 1014051 +  -3.4  -3.29461   CGGAACAGCTATTTT                CCTT GTCAA AAGG                TTCTGAACGCGATTA  46 69
 C1O54_04480 NONE
 C1O54_04485 1016555 .. 1016579 +  -2.2  -2.91144   TTTCGAGCAATCATT          GAGGGATT AGCACTATG AATCTCTC          TCCTTTCGCAACTAC  41 16
        nifJ 1031232 .. 1031261 + -17.2  -5.14563   GCCGCTTAATTTCAA       CGCCCCTGTCCGG CTTAT CCGG-CAGGGGCG       TTTTTTACTGCCGGA 100 48
 C1O54_04560 1032833 .. 1032845 +  -3.3  -4.56597   TTTCAAATTCCTCCA                GTCCG TCC CGGAG                TTTTTCAAACCGCAG  67 301
 C1O54_04575 NONE
 C1O54_04580 1038391 .. 1038403 +  -9.1  -2.64155   CTCCGCGAGCAGGCT                GAGGG TAT CCCTC                TCCATTTCAGAAAAA  61 47
        holA NONE
 C1O54_04605 1047632 .. 1047646 +  -2.2   -3.7108   CATCCTTGAGCCGTA               TATGAT CCC ATTATA               TTTCCCTGTCGCCAT  50 121
 C1O54_04615 1050342 .. 1050377 + -13.3  -3.56568   TCTTAATACTGAAAA    GGCCGCATGCGGAAA AACGTC TTCCCGCATGCAGCC     TTTGGCGAATGGTTA  86 58
        dnaN 1052711 .. 1052736 + -15.5   -5.4833   GTTCATACAGAGGGA         CAGGCGTCGTG GAGA CATGACGCCTG          TTTTTTATTGGCTGA 100 59
 C1O54_04645 NONE
 C1O54_04650 1057284 .. 1057307 +   -11  -4.52047   TGATTGAGCGAGGAA          GTCCGGGCAG AAAA CTGTTCGGAC           TTTTCTCATATAGTC  95 34
 C1O54_04655 NONE
 C1O54_04665 NONE
 C1O54_04670 NONE
 C1O54_04675 1060099 .. 1060143 + -20.5  -3.23216   ATCACAAATCACTTA TCACAAATCACAAGTGATT AATCACA AATCACTTGTGATTTGTGA TTCCTAATGATACAA 100 77
 C1O54_04690 NONE
 C1O54_04695 1062688 .. 1062726 + -13.2  -5.60993   GAATACCGAAAATCA   GACCGTTGACTGGTCGCA CTA TGCGAAAAGTTGACGGTC   TTTTTTTATCCGCAA 100 73
 C1O54_04700 NONE
 C1O54_04705 NONE
 C1O54_04710 1066547 .. 1066573 +  -4.3  -4.98531   CCTCATACCGACCAC         CGCCCGATGAT GAAAA GTCACCGGGCA         TTTTTCATTTACAGG  76 117
 C1O54_04715 1066740 .. 1066761 +  -4.5  -4.82855   CGTCTGCTCCGTGAA           GAAGTCCGCA GAA TGTG-ACTTC           TTTTTGAATTTGATG  74 8
 C1O54_04740 1071636 .. 1071650 +  -5.7   -3.9344   TAAACGCAACAGCAG               CTTGC AAAGG GCAAG               TTTGCTGTTAGAATT  64 64
 C1O54_04745 NONE
 C1O54_04750 1075554 .. 1075584 +  -7.6  -4.86731   TACCGTTTGAACAGG      CGCCCCGC-CGCTC TTTCC GAGTGCGCGG-GCG      TTTTATTTGCCGGGC  85 54
 C1O54_04765 NONE
 C1O54_04770 1080532 .. 1080552 +  -2.5  -2.84229   GTTCCTGAAGAGTAA            TTCCTCCTG CCT CATGAGCAA            CTTTCCTGCAGATAT  39 26
 C1O54_04775 1081377 .. 1081393 +  -9.5  -3.87815   CTGTGTAGGATCCAA              GACGTAT TCA ATACGTC              TTTATGAAGATCAAG  78 159
 C1O54_04780 1082199 .. 1082243 +  -4.9  -4.20516   CCGGCGTTAAAAAAC GGGCTTCCGGAGAGGAATTAA TAA TTTCTTAATGTCCGGAGGCCC TTTGTTAACTACCCG  63 48
 C1O54_04785 1084189 .. 1084209 +  -4.5  -4.06502   CTTATCAGGGATTTG            GCTGCCGGG CAA CCCTTCGGC            TTTACTTTGCAAATC  61 225
 C1O54_04795 1086778 .. 1086791 +  -9.5  -2.60244   TGGCGGAAAAATCGT               CCGGC ATCA GCCGG                TGCCTTGGTTCCGCG  65 68
 C1O54_04810 1088755 .. 1088768 +  -6.7  -4.74103   AAAATTTTTAGATAA               CAGGA AAAA TCCTG                TTTTTCCATTCAACG  79 78
        clpB 1091437 .. 1091466 +   -15  -2.63631   TGCCGGAAAAACAAT       GAAGGGCGTCCC CTGAGA GGGCCGCCCTTC        TGATATAAAGATTCC  83 59
 C1O54_04825 1093536 .. 1093553 +  -2.7  -3.73072   GAAGCATGGCGCAAA             TGAAATC GCAA GATTCCA              TTTGGTCCAGCAATT  52 133
 C1O54_04830 NONE
 C1O54_04835 NONE
 C1O54_04840 1095492 .. 1095511 + -10.8  -2.71924   GCGTGGCAAAGAAAA            CGATTGCT GAGA AGCAATCG             CTTTCCAACAAAGTG  69 80
 C1O54_04845 1098506 .. 1098522 +  -2.3  -2.95942   CTCCCCGTCGTGAAT              GACAA CTTGCTC TTGTC              TCATTTACCTGTGCA  41 50
         rrf 1098835 .. 1098874 + -16.4  -4.72497   GCCGGGATTTTTTCC  CATCAGGCCCCGCCAGTC ACTT GACTCGCGGGGCCTGTTC   TTTTCTTGCTCGGTC 100 34
 C1O54_04855 1099147 .. 1099169 +  -9.9  -5.65496   ATTGTTTGAAGAAAT           CCGGGAGAA AATAA TTCTTCCGG           TTTTTATTTTTCCTG 100 104
 C1O54_04860 NONE
 C1O54_04865 1100906 .. 1100919 +  -2.3  -4.20707   AGACCTGGTACGGTC               CGGAA TGCT TGCCG                TATTTTTTAGTGGAG  57 46
        nrdR NONE
 C1O54_04875 1102445 .. 1102471 + -10.9  -4.08692   CGGAGATGAGCCGGA         TGAGGGAATGC AAGGG GCCTTCCCTCA         TTTTCCCCGAGGTTG  84 274
 C1O54_04890 NONE
 C1O54_04895 1106702 .. 1106719 +  -2.6   -4.7373   TTGAATAGCCAGGAG             GGAAGG GGATGG CCGTCC              TTTTTCATGAACTGG  69 75
 C1O54_04915 NONE
 C1O54_04920 NONE
 C1O54_04925 NONE
 C1O54_04930 1116261 .. 1116271 +  -2.4  -4.60041   CCTGCACGGTGCCTA                 CCAG ATC CCGG                 TTTTTCCGGATGGCT  65 182
 C1O54_04950 1119850 .. 1119866 +  -2.2  -3.81195   GATTTTTGACACGTA             GC-GCCG GGAA TGGCAGC              TTATGGTTTTTGTTG  53 139
 C1O54_04955 NONE
 C1O54_04960 NONE
 C1O54_04965 NONE
 C1O54_04970 1127039 .. 1127053 + -11.4  -3.05046   TTTAATACCTGCACA               CGGGCA AGC TGCCCG               ATTTTGCCGCCCTCA  74 36
 C1O54_04985 1129001 .. 1129013 +  -5.5   -3.1149   GTAGGGAAGCCGTTC                GGCAG CTC CTGTC                ATTTTGCCATTGACT  51 37
 C1O54_04990 1131462 .. 1131475 +  -5.2  -3.95988   CCCTCCCTGATGAGC               CGGG CCGCTT CCCG                TTCTATTTCCTTTTG  62 215
 C1O54_05020 NONE
 C1O54_05025 1135210 .. 1135224 +  -3.4  -4.67904   AGCAAGGCGAGTTTT               CTCCGG TCG CTGGCG               TTTTTGGCCTTGATA  67 349
 C1O54_05070 NONE
 C1O54_05075 1148134 .. 1148162 +  -8.7  -4.06419   CCATCCTCTGCAAGT        CCGGGTGCGGTAG GAG CCGCCGCATCCTG        TTGTTTCTCGCGGAG  77 13
 C1O54_05095 1151419 .. 1151446 + -16.4  -5.60993   TTTCAGGATTGTCTC        TCCTCCGGCATT GCGA GATGCCGGAGGA         TTTTTTTATGGAAGG 100 48
 C1O54_05125 NONE
 C1O54_05130 1159425 .. 1159439 +  -3.4  -5.09521   CAGCAGGACCTCAGC               CGGTAG GAA CAGCCG               TTTTTCCTTTCTTCC  76 20
 C1O54_05145 1163934 .. 1163955 +  -2.1  -4.25104   ACCAGCAGGGGGGTG           GCATCCTTG TGGG CCAGGGCGC            TTTTAATCGCCAGCA  60 360
 C1O54_05155 NONE
 C1O54_05160 1166975 .. 1167002 +  -3.4  -4.30034   CGCGTCCCGGAGCTG        CGCCGCAGGGTAT TTT AT-CCTTGTGCCG        TTTTCGTGCGGTTTT  61 57
 C1O54_05165 1167832 .. 1167862 + -19.1  -3.01712   GGGAGGAACCGCTTT      CCCCCTT-CCGGCC GGAT GGCCGGGAAGGGGG       TCTTGACCCGGAAAG 100 62
 C1O54_05170 NONE
 C1O54_05175 1168618 .. 1168630 +  -4.8  -3.36289   AGGCCGTAGGAGACG                CCGT GAAAA ACGG                TTAATTCAAATGATC  52 9
 C1O54_05180 1168917 .. 1168946 + -17.9  -5.24129   TATGCGGGAATGGTC       TCCCCTTGTCCGG ATTT CCGGGCGAGGGGA        TTTTTTATGCAGGCC 100 85
 C1O54_05210 NONE
 C1O54_05215 1178739 .. 1178768 +  -9.2  -2.76696   ACGCTTGTTTTCCCC       ATGGCAGGGGCC GTGAAA GGCTCCTGCCGC        CTTGTTGCGGCAGGA  62 67
 C1O54_05220 1181991 .. 1182001 +  -2.6  -4.01902   AAACGGAATGAAAAA                 TAAT GAT ATTA                 TTATTTGATGAATCT  55 55
 C1O54_05225 1182476 .. 1182527 + -17.4  -4.13014   AACCGTCTACAGCCG GAAACAGGCGCCGCCCTGCCAGG TAAAAAC CCTGGCAGGGCGGCGT-TCTTCC TTTTCGGAATATCCA 100 49
        cobA 1186013 .. 1186023 +  -3.2  -4.59773   AGCAGAACCGCCATG                 GGAG ACA TTCC                 TTTTTCCAGCTCCCC  67 359
 C1O54_05250 1189076 .. 1189099 +   -11  -3.09648   AAGATTGGGAAAAGA          GCCGGGAAAA AGCT TCTTCCCGGC           TGTTCCCGTATGTTG  74 69
 C1O54_05255 1190445 .. 1190458 +  -3.1  -4.59109   AAGGCTGATTATTTA               TTCCT GCCG GGGAA                TTTTTCAGAACTATC  64 153
 C1O54_05280 1196794 .. 1196814 + -13.3  -3.04398   ACGATTGTACAGTAA            TGCCCGGAA AAT TTCCGGGCG            CTTTTCCGGAAGAAA  81 26
 C1O54_05295 1201634 .. 1201662 + -11.9  -3.57263   CGGCCTGCGCCGTGC        GGAGATGAGGAAT TGA ATTCTTCATTTCC        TTTGCCGATGCAGAT  79 327
 C1O54_05305 1203800 .. 1203817 +  -2.7  -3.55444   GGTGGCCGCGGTCCG             CCATG TTCAGTTT CATGG              TTTGGAACGTGGGGA  50 258
 C1O54_05320 1206356 .. 1206369 +  -8.1   -2.7263   AGGAGAAAAGGCCCA               GGCCT GAGC AGGCC                GTTTCCGCCCGTCCT  59 19
 C1O54_05335 NONE
 C1O54_05340 NONE
 C1O54_05345 NONE
 C1O54_05350 1214650 .. 1214671 +  -8.1  -2.82516   GTGCAGAACACGCAA           TGCTCCATGT GAA ACATGG-GCA           TATGCTGGTGCAGAG  57 421
 C1O54_05375 1221114 .. 1221130 +  -5.7  -4.36914   GCCCGATGCGGTAGG              CCCGGTC CGT GGCCTGG              TTTTCTACAGCGGGG  72 296
 C1O54_05395 1226694 .. 1226736 + -11.9  -3.43151   AGCCCGGCTCCCGGC GGGCTGTTCCCCCCTGCGG AATTC CCGCATCCGGGAACGGTCC TTCGTTCATCGTTCC  80 52
 C1O54_05400 NONE
 C1O54_05405 NONE
 C1O54_05410 NONE
 C1O54_05415 NONE
 C1O54_05420 NONE
 C1O54_05425 NONE
 C1O54_05430 1230347 .. 1230381 + -18.6  -3.00128   AGCCTAATCACATTT     GGCGAACCGGGTCATG CAG CTTGACCCGGTTCGCA     TCATTGTGTTTACTG 100 34
 C1O54_05435 NONE
 C1O54_05440 NONE
         map NONE
 C1O54_05450 NONE
 C1O54_05455 1236273 .. 1236285 +  -4.8  -2.73159   GTCGTGCTGGCGCCC                CAGC GGTAG GCTG                ATTTAAAAAACTTCC  45 17
        ppk1 1238654 .. 1238671 +  -5.5  -4.56702   AATCGCATCCAGTTC             CTTCCGG AACG CGGGAAG              TTTCTTTGCTTCCGG  73 275
 C1O54_05500 1246980 .. 1247008 + -11.7  -3.38812   AAGGCACCTGATGAA        GTGAAAAGGGGGA GAT TCCCCCCTTTCCC        TGTTGTTCCGGCGCC  80 22
 C1O54_05535 NONE
 C1O54_05540 NONE
 C1O54_05545 1259203 .. 1259213 +  -2.4  -5.00616   CCGGCCCTGCTGCCT                 CCCG TTA CGGA                 TTTTTTCCGGAAGCG  70 101
         xth 1264208 .. 1264224 +  -4.3  -4.41241   GTCAGCCTGGAAATT              GACTGCT GAG AGCGGAC              TTTTATGCGAGTTTA  66 17
 C1O54_05570 1265254 .. 1265275 +  -8.7  -3.29144   AAGATGGAGCCGGAC           GGAAGGGGT GAGC AGCCCTTCC            TTCTCCAGACGCTCC  65 405
 C1O54_05580 1266540 .. 1266571 +  -7.9  -2.84298   TTTCCAGGCTTCATA      TCCGCCGTATCAG CATGGC CTGACGCGGCGGC       TCCTTCTCCCGTCTG  56 3
 C1O54_05585 1268381 .. 1268391 +  -6.8  -4.07885   ATCCGGTGGGGGATG                 CGGA TTT TCCG                 TTTTAAAAACGGCTG  69 9
 C1O54_05590 1270461 .. 1270471 +  -2.4  -4.10953   GGGAATCCGCCGTTC                 GCGC TGG GAGC                 TTTAATTTAATGCGT  55 10
 C1O54_05595 NONE
 C1O54_05600 1272899 .. 1272912 +  -2.3  -2.98127   CGCCGGACGGCGCGC               CTGCG GAGA CGGAG                TAATTGCTTTTCTTC  41 53
 C1O54_05605 1273802 .. 1273812 +  -6.8  -3.40867   GTGCGGCTCCCGTGC                 CGTG CTG CACG                 TTCGTTGCTGCCTGG  60 138
 C1O54_05615 1276318 .. 1276336 +  -5.2  -2.53581   CGTCCCGGCAGTGCT             TTTCGCCC GTG GGGCAAAG             TAGCTTCCAGGTCTC  47 4
        galK NONE
 C1O54_05625 1280067 .. 1280090 + -14.6  -4.62069   GTCCCGTATTTTCAA          TCCTCCCGGT TCAG GCCGGGAGGA           TTTTTCACGTCCGGA 100 58
 C1O54_05640 NONE
 C1O54_05645 1285294 .. 1285306 +  -4.7  -2.71011   GAACGGCCAAAATCG                GCTGG AAA CCTGC                TGCTTCCGGCGCCGT  44 42
 C1O54_05650 1285683 .. 1285713 + -17.6  -4.72272   TCCTTTATTACAAAA       GCGGCTTCCCTGTC CAA GGCAAGGAAGCCGC       TTTTTCATGGAAAGC 100 57
 C1O54_05655 NONE
 C1O54_05660 NONE
 C1O54_05665 1287538 .. 1287569 +  -3.8  -3.22774   CCCCGATCTCCTGCT      TGCTCTCTATTTTC GTAT GAACATAGAAAGTA       TTGATGATAAATCTG  48 92
 C1O54_05700 NONE
 C1O54_05705 1300097 .. 1300111 +  -5.7  -4.62872   ATACCGGCACAGACG               CAGCA ACAGC TGCTG               TTTTTGAAGGTTCAT  75 256
 C1O54_05720 1303224 .. 1303249 +  -6.7  -4.08064   TGGCGTATTGCCGGG         TGGCGAGGGCC AGCT GGCCCTGGCAG          TTTTCACGGGAGATT  68 150
 C1O54_05755 1311312 .. 1311347 +  -8.9  -2.53346   GGATAACCGTTATTG    GAAGACGTCTCCGGC GCGAGG GCCTGCGTCGTCTTC     ATCTTCCATTTCTGC  58 477
 C1O54_05775 1316202 .. 1316212 +  -3.2  -4.36914   CACATATGCCGCGGC                 TTCC TCC GGAG                 TTTTATGGCCCCAGG  64 213
 C1O54_05795 1320259 .. 1320289 + -10.6  -4.99043   GCCATCAATTTTCCG       CTGCAATATATTCG TGA TGAGTATATTGCGG       TTTTGTTTGTAGGGG 100 37
 C1O54_05825 1328621 .. 1328643 +    -9  -3.55061   TGTACAGGACAGAGG           CGGGATTCCG ACC CGGATGCCCG           TGTTGTTCTGTATGA  68 305
 C1O54_05835 1329421 .. 1329433 +  -4.8   -3.4582   GTGCAGGATTTTATC                CGGT TCCGC ACCG                TATTTAATGAAGTGG  52 324
 C1O54_05845 1332322 .. 1332340 +  -3.8  -3.25166   AATATAGCCGGGTTT             GTGGGC ATCAAGA GTCCAC             TCCTTTTTGAGATGG  48 155
 C1O54_05855 1333845 .. 1333871 + -16.6  -4.65916   GGATGATGAATAAAA         CCCCGCATGCGT TTC AGGCATGCGGGG         TTTTATTGAAATAGC 100 110
 C1O54_05865 NONE
 C1O54_05870 1339098 .. 1339108 +  -6.8  -4.77036   CTTCATCTTTCAGAG                 CCTG GTT CAGG                 TTTTTGGTGATGGCG  79 435
 C1O54_05880 1340302 .. 1340336 + -12.2  -4.57057   GCCATTAACTCCTTT     TGCGCGTCAATCTG CGTTCGC CGGATTGACGCGCC     TTCTTTTTCTGCTGT 100 33
 C1O54_05885 NONE
 C1O54_05890 NONE
        rsmI 1342726 .. 1342742 +  -2.1  -3.60048   CAATGCATTCCTTCG              GATGCCC GGC GGGAAAC              GTTTTTTGGGCCGGA  48 178
 C1O54_05905 1344053 .. 1344078 +  -4.6  -4.03769   TATTGATGTAGCTTC         CGTCCAGGAG AAAGTA CTCCTTGCCG          TTCTTTCCCTTCTGT  61 160
 C1O54_05945 1352620 .. 1352632 +  -3.3  -3.17392   GGAATTCAGCGCATG                CTGGA ATC TCCCG                TTGACTTCCAGCGTC  44 9
 C1O54_05950 NONE
 C1O54_05955 1353373 .. 1353396 + -16.7   -4.7373   AACATTTCTTATCCT          GGCCGCGGC GTGAAA GCCGCGGCC           TTTTTCATGCCATGA 100 44
 C1O54_05960 1354628 .. 1354638 +  -4.6  -4.28049   AATAAGTGGAGTTCT                 GCGT ATA GCGC                 TTTTCCCATTTTACG  65 515
 C1O54_05975 1357282 .. 1357295 +  -8.1  -3.67305   GCCCCGGAAATGCCG               CAGGC GGAC GCCTG                TTCGTTGTTTCTGTC  70 42
 C1O54_05995 1362087 .. 1362106 +   -10   -3.6682   AGATCCCCCGCCCGC            GCCGTGCT GCGC AGTACGGC             TTTGCCTGCCTCCAC  72 491
 C1O54_06010 1365061 .. 1365081 +  -6.7  -4.81685   TGCTCATATTCGGAG            GGGGGCGGA CAA TCCGCGCCA            TTTTTCCTCCTTCCT  82 88
 C1O54_06015 1367825 .. 1367849 +  -5.8  -3.53444   AAAAAAGGAAAACCG         TCCGG-GCAAA TGCC TTTGTTCCGGA          TTTGGAGAAAAGTAA  59 138
        hflX 1369429 .. 1369441 +  -6.2  -4.63218   CGAAGGCCGTTTCGG                GGCG GGAAA CGCC                TTTTCTTCCGGAGAC  76 79
 C1O54_06040 1380002 .. 1380012 +  -2.4  -4.15044   TCCTGACCCTTCAGA                 GCCG TTC CGGA                 TTTATTCCGGAACGG  57 87
 C1O54_06050 1381658 .. 1381691 +  -4.5   -2.8805   ATAAAGGAAGGCCCG     CAGAA-CAGGGGCG GCAGGAG CGCCCCTGATACCG     TGTGTCCGGAATGCT  47 66
 C1O54_06060 1382966 .. 1382993 +   -20  -3.60098   AGACCTTGGACGAAA        GCCGCTTCATCC GGGT GGATGAAGCGGC         TTTCCAGTAAAAAAT 100 53
 C1O54_06075 NONE
        metF 1386980 .. 1387004 +  -7.2  -2.74701   AAAGGAATTATAGGT         TCCCTG-CTCA AAAC TGAGGCAGGGG          TAATCTTCCAGATCT  54 340
 C1O54_06130 1399689 .. 1399723 + -10.7  -3.63266   CTGGAGCATGGGAGG     CAGCCCCTTGCCTGT TCCAT GCAGGTACGGGGTTG     TTTCCGCTCCCTTTT  74 401
 C1O54_06140 NONE
 C1O54_06145 1401293 .. 1401327 + -10.1   -3.7557   GGACGCATCATGCAT    GGCGCGGCTGAACCGGA ATT TCCT-TTCAGCC-CGCC    TGTTTCCTTTTTACA  77 15
 C1O54_06150 NONE
 C1O54_06155 1401950 .. 1401975 +  -9.8  -5.82036   ATTCCTTTTTTGAAA         CCCTGTAGAC CCAATA GTTTACAGGG          TTTTTTCTTTCTTGT 100 40
 C1O54_06200 NONE
 C1O54_06205 NONE
 C1O54_06210 NONE
 C1O54_06215 1413420 .. 1413448 + -12.5   -4.3467   TTATAAAGATTTTGA        CGCTAGGCTGATT TTT ATTTAGCCTAGCG        TTTTGCTATGCCCAT 100 62
 C1O54_06220 1413728 .. 1413742 +  -2.8  -2.53449   GTGAGACAAGTGCCG               GGCA ATATCTC TGCC               ATCTTATCCGAATAT  40 37
 C1O54_06225 NONE
 C1O54_06230 NONE
 C1O54_06235 1416586 .. 1416604 +  -8.2  -2.55074   TGGAGAGTGTGCGGG             TCTGCATT GTT GATGCAGA             TGAATTCCGCTTCCA  55 398
 C1O54_06260 1419719 .. 1419744 + -16.2  -5.79595   ATGTTTTTCATCCCG         GCGCCGCCAT CGCTGC ATGGCGGCGC          TTTTTTATTTTCCGC 100 44
 C1O54_06265 1420451 .. 1420474 +    -6  -3.72893   AGGGTCTAAAATGAT          GCTTGCAAGT CTGA ATTTGCATGC           TTTAATACACCAGTA  62 50
 C1O54_06270 1421333 .. 1421346 +  -2.3  -2.87132   AACAGACGGCCCGGC               CCGGA AGCA TCCGC                TCTGTCGGAACCGGG  41 48
 C1O54_06275 NONE
 C1O54_06280 1422401 .. 1422428 + -17.1  -5.29445   TTTCATTGACTCTCA        GCTTCCGCTCC CCAAGA GGAGCGGAAGC         TTTTTGTTATTGACG 100 61
 C1O54_06290 1423161 .. 1423171 +  -6.8  -3.01712   GCGCCATGTTAAATA                 TGCC TCT GGCA                 TCTTGACAGACGGGA  54 293
 C1O54_06295 NONE
 C1O54_06300 1427868 .. 1427917 + -18.8  -5.42164   CGCCGGCCGATATTT CTTTA-ATAAGGGCCGTCTCCCC GTAAG GGGGAGACGGCCCTTGTGTTGAG TTTTTCTTGTTTCTG 100 63
 C1O54_06325 1436294 .. 1436312 +  -5.2  -4.08992   CGGTGCGGCGTCCGG             CGGCTTCA TGC TGGAGCGG             TATTTTATTCTTGTC  64 509
 C1O54_06360 1444672 .. 1444697 + -15.5  -5.00339   CCAAGGTCTTTAAAA         CCGCCCCTTTT TTCG GAAAGGGGCGG          TTTTTCATTGTTGAT 100 61
        proB NONE
 C1O54_06375 1449647 .. 1449669 + -14.8  -3.23235   GCCGTAAACAAGAAA           GCACCGCGGC ATG GCCGCGATGC           TTCCGTTGATATATA  90 52
 C1O54_06430 1463650 .. 1463687 +  -2.5  -4.12942   TCCCGGAAGGCGCTG   CATGCGGAAAGGCTGTT TTCT ATCTGCCTCCCAGCATG    TTTTCCCGGATTTCC  57 65
 C1O54_06450 1468773 .. 1468797 +  -3.5  -2.54325   AGGAATAAGCGTGAG          CGCGAATAATC GTT GATTCCTTGCG          GTATATTTGCCACAC  42 33
 C1O54_06455 1471488 .. 1471504 +  -7.2  -3.27022   CGCTGATGAGACTGT              TGCCGC AAGGA GCGGCG              TTCCTGTCAGATGAC  61 220
 C1O54_06460 1473775 .. 1473801 + -14.5   -5.5112   CCAGTTTTTCCTGCA         GGCTTCCGGGA GTTTA TTCCGGAAGCC         TTTTTTGTTGATGGA 100 55
        atpB NONE
 C1O54_06470 1475274 .. 1475288 +  -7.8  -4.13767   TAAAACGGAAGTTCC               GTTCCC GGA GGGAGC               TTTTCCGCTCCGGGG  74 38
 C1O54_06475 NONE
 C1O54_06480 NONE
        atpA NONE
        atpG NONE
        atpD NONE
        atpC NONE
 C1O54_06505 1481301 .. 1481315 +  -8.6    -3.786   TGCTGGAGAATACCG               GAAACG GCT CGTTTC               TTTCAGCTTTTGTGG  70 75
 C1O54_06515 1483215 .. 1483238 +  -7.4  -3.30007   CCTCCCGCACGGGAT          CGGCATGCCTG CGC CGGGCGT-CCG          TTATGGGCCGGTCTT  61 98
 C1O54_06520 NONE
 C1O54_06525 NONE
 C1O54_06530 NONE
 C1O54_06535 NONE
 C1O54_06540 1486559 .. 1486587 +  -4.4  -3.23481   GTTTGCAGCCTTTTA        GCCCCTCCGGTT TGTTC ATCCGGATCGGC        TCTTGACTTTCATTT  50 47
 C1O54_06545 1488615 .. 1488635 +  -2.4  -4.57073   AAGAAGCAGGAATTC            CAGGTCGC GGATG GCGCGCTG            TTTTTCAGAAGGCTC  65 178
 C1O54_06615 1503974 .. 1503988 +  -4.2  -3.90112   CCAGGATGACGTCGT               CCGG CGTTCTT CCGG               TTTCCTTCAGCACGG  59 414
 C1O54_06630 1507269 .. 1507282 +  -4.5  -3.03203   CCCCATCAGATCAGG               TCCGC TTTG GTGGA                TAAGTTTTTTATTTT  48 9
 C1O54_06635 1507484 .. 1507500 +    -8   -3.1352   GTAAAAAAGCAGGCG              GCGGAT ATACA ATCCGC              TATGTTGCCTTGCAC  62 37
 C1O54_06640 1508960 .. 1508972 +  -6.3  -4.07568   TATTGATGTTTTTGC                TGTTG TTT CAACA                TTTTGAGAAGAGACA  66 35
 C1O54_06645 1509991 .. 1510002 +  -5.8  -3.07994   TTGCCCTCCTTCTGC                TGCG CCGG CGCA                 TTCCGTGCCATTGGG  53 88
 C1O54_06655 1511312 .. 1511326 +  -2.8  -4.07246   CAAGGCCCGCCAGTA               GGGATA TGA TGTTCC               TTTCATTTCCGGTAA  56 25
 C1O54_06660 NONE
 C1O54_06665 1513406 .. 1513416 +  -2.4  -2.84051   CATGCGGAGCGTGGA                 GGGG ATA CCCA                 GTTTCATGACAGTAC  39 219
 C1O54_06685 1517807 .. 1517824 +    -7  -3.16261   TGCCCTCGATTCCCA             CAAGCG ACTTCA CGCTTG              TATAGTTTTCTGATT  54 464
 C1O54_06695 1521568 .. 1521603 +  -8.2  -4.24948   GCCCCCTGTAAAGCA    GGCCGGCGTCAGGCGAG TTC CAC-CTTGACGCCGCTC    TTTTCAATCTGGTCG  76 214
 C1O54_06780 1540563 .. 1540617 +  -8.7  -4.11484   AAGAAGCGTTTCTGA TGCCTTCGCTA-TTCCGG-ACAGGGTT ATT AACGCTGTTCCGGAATTGGCGCGGACA TTTTGGAACGTTCCG  77 26
 C1O54_06785 1540824 .. 1540840 +  -3.6  -3.16564   CGGGGTGTAGTTGTT              CCGGCT GTGAA GGCTGG              TTCCCTGATGTTTTT  46 31
 C1O54_06790 NONE
 C1O54_06795 1543828 .. 1543839 +  -3.6   -2.7263   CTACAAAGTTTTTGA                CTGC GTTT GCGG                 ATTTGAGGGAATCAT  44 72
        queG 1556666 .. 1556692 +  -5.2  -3.00918   TAAAAATAGAAAAAA         TGATGTTTTGGT CTT GTCAAAACCTCA         ATTTATGGTATCCAT  49 38
 C1O54_06850 NONE
 C1O54_06855 NONE
 C1O54_06860 1558408 .. 1558433 + -12.5  -4.14392   GGATTTGCTTCAAAA         CCCCGGTTGCC TTTT GGCGGTCGGGG          TTTTGGGCATTCAGG 100 55
 C1O54_06865 1559460 .. 1559482 +  -8.5  -3.72324   CTTTGCCGGAGCCGC          TCTTG-CGGG GACT CCCGTCAAGA           TTGTTGCTCCGACTC  70 211
 C1O54_06875 1561943 .. 1561972 + -12.7  -2.87344   AGTTCCCTGAGGGGG       GCGGGCGGGGGCC ATAC GGCCGTCTCCCGC        TCTATAGGAAAGGTG  74 476
 C1O54_06890 1564843 .. 1564865 +   -12  -3.01924   CTGGAAAATAAAACA           GCCTGTACGC GGG GCATACAGGC           TGTTGAGAAAAGATA  76 101
 C1O54_06935 1576216 .. 1576259 +  -2.5  -5.26875   TATTTTCACCATTTG AACGCATTTCCGGGTAGGAA ATTTG TTTTTGCCCGGGAA-GTGTC TTTTTTGGTTGCGGA  78 265
 C1O54_06940 1578256 .. 1578281 +  -3.3  -3.04517   GCGAAGGCATAGAAG         CAGAGGAATAA TTCT TTCTTCCTGTG          GTTTTCAAGGCCGCT  44 15
 C1O54_06945 1578489 .. 1578499 +  -2.4  -5.37345   GCATCCGCTATTTAG                 CGGG TTT CCCC                 TTTTTTCTGCTTGGA  78 26
 C1O54_06970 NONE
        gmhA NONE
 C1O54_06980 1584154 .. 1584165 +  -5.8  -5.61881   AGTTTCGTGAACCTG                GCCT GTAC AGGC                 TTTTTATTTTTACAC 100 186
 C1O54_06985 1587220 .. 1587259 +  -8.5  -4.62872   GTGGTGTCCTCTGGC  CCTGGGGCGGCTGTTTC TTCCGT GGAATGGCCGCCCTGGA   TTTTTAGCCCTTGGT  86 69
 C1O54_06995 NONE
 C1O54_07000 NONE
 C1O54_07005 1590977 .. 1590990 +  -2.3  -4.07568   GTTTTCCGGAATGTC               CGAGA TGAC TCCCG                TTTTAGCGCCCAGCG  56 233
 C1O54_07020 NONE
 C1O54_07025 1594192 .. 1594208 +  -5.8  -4.93877   TCTGAGGCTGCCGGG              CGTAGG GGCCG CCTGCG              TTTTATTTGATGCCC  81 36
 C1O54_07030 1594564 .. 1594575 +  -4.4  -2.52464   ATGCCGTGCGGGAGG                CTCA CCGG TGAG                 TCGGTTGCGGACGGC  44 15
 C1O54_07040 1596195 .. 1596206 +  -4.4  -2.95717   ACTGCTATTGCTTAA                TTGG CCTG CCAA                 GTTGTTCTGTCTGGT  47 26
        bioD 1596954 .. 1596968 +  -2.1  -3.61178   TTACATGGACATGGA              CG-TCC TGCT GGAACG               TTTGCACTGACTGGA  47 1
 C1O54_07050 1599761 .. 1599772 +  -5.8  -3.75898   CCGCGGAAGAAAGGC                CGGA GAAG TCCG                 TTTCCCTGATTTCTT  61 445
 C1O54_07060 1601613 .. 1601632 + -12.1  -4.07687   AGGATTTTCCCCCAT            GGCCCGG TATTTT CCGGGCC             TTTTGCAGGGGGGCT  90 39
 C1O54_07065 1602576 .. 1602599 + -18.2  -4.75372   AGCATGATTTGTACA          GGGCGCATCC AAAA GGATGCGCCC           TTTTTCATGCCTGAT 100 51
 C1O54_07075 NONE
        nadD 1606847 .. 1606883 +   -11  -2.52946   GCGTTATTTTTCCCC   GTGCGGCTTCATGGGCGG CTC CCG-TCATGAGGC-GCAC   CATTTTGTAGAGGAA  67 192
 C1O54_07090 NONE
 C1O54_07095 NONE
 C1O54_07100 1615800 .. 1615813 +  -2.3  -2.78813   GCCTCCAGCTGTCTA               ACGCA GTGA TGCGA                CTTATTGAGATGAAA  39 119
 C1O54_07105 1616744 .. 1616760 +  -4.3   -4.3208   GGCTGCCGCCCGGCT              CAGGGCG CGC CGGCTTG              TTTTCCGTTATAACC  66 83
        rpsO 1617685 .. 1617718 + -10.1  -4.82901   GCATATTCCCGTTTG     ATTCGGCCGTTGCGG TTTT CCGCAGCGGCCGTTG      TTTTTATGGGAGGGG 100 49
 C1O54_07120 1620716 .. 1620746 + -20.5  -4.30014   GCCTTTAAATTCTCA       GCCCCGTTTCCGG TTATT CCGGGAACGGGGC       TTTTCGATTGCTGGA 100 54
 C1O54_07125 NONE
 C1O54_07130 NONE
 C1O54_07135 NONE
 C1O54_07140 1626738 .. 1626749 +  -3.6  -3.63515   GTTGGTAAAAGCCAT                CGGT TCAA GCCG                 TTCTTCCCGCTAGGC  52 1
 C1O54_07145 1627685 .. 1627699 +  -7.8  -3.08327   GCTTGCGATGTCTTC               CAGGCC AAT GGCTTG               TCTTCCCGGTTTGGT  57 246
 C1O54_07155 NONE
 C1O54_07160 NONE
 C1O54_07165 1633621 .. 1633632 +  -3.6  -4.03043   TTTTTGATGGAAATT                CGGG TTAA TCCG                 TATTTTTCCCTTTCT  59 253
 C1O54_07170 1635501 .. 1635547 + -15.3  -3.80551   GTGTGTGTAAGCGCA GCTCCGCAGTTGTCAAGGTTTG TGCG TGGACCT-GACGGCTGCGGAGC TTTAATAAGTGTTTA  95 81
 C1O54_07175 NONE
 C1O54_07180 1639795 .. 1639830 + -14.1  -3.61398   ATTCACGGTTGTTCA    GTCTCCGGAGGTTCGT AAGCA ACGA-CCTCCGGAGCC    TTGTTAAGGCAAGGC  89 81
 C1O54_07190 NONE
 C1O54_07195 1645062 .. 1645072 +    -4  -4.84761   GAACGAAACAAGGGA                 TGTA TAT TACA                 TTTTTGTAAAAATCT  72 45
 C1O54_07200 NONE
 C1O54_07205 1647739 .. 1647751 +  -6.9   -4.6902   CGCGGGCTTGTTCCC                GGGGG CTT CCTCC                TTTTTCCGCTTATCC  79 102
 C1O54_07225 NONE
 C1O54_07230 NONE
 C1O54_07235 NONE
 C1O54_07240 NONE
 C1O54_07245 1658073 .. 1658089 +  -7.9  -4.57474   GTAAGTGATGGAGCT              TCGGGGG CTG CTCCCGG              TTTTGTCTGCGTTCC  79 37
 C1O54_07265 NONE
 C1O54_07270 1661816 .. 1661864 + -10.2  -4.07885   TCATTGCCCGGCAGG GCATCCGGTGATTGCGGAAGGCC CTGC GGCCTTCCGCTA-CAGCGTGCGC TTTTGCGGAGGCGTC  84 61
 C1O54_07285 NONE
 C1O54_07290 1666067 .. 1666101 +  -7.2  -2.82142   GTACAGGAAGGAAAT    TCAGC-CGAAGGTGG AAATGA CCCCCTTTGCGCTGA     CTTATTCCATGTCCC  56 492
 C1O54_07295 NONE
        rsfS 1668613 .. 1668644 + -18.8  -2.96183   CATGCCTGAAATTTG      GGGCCGCG-CCGGAA TTT TTCCGGATGCGGCCC      TGTAGTATTGTCTGC 100 51
 C1O54_07335 1674186 .. 1674211 +  -5.3  -4.15006   GCTTCCATGTATTGT         AGCCAGCGATT TCTT GATCGCAGGCC          TTTTCGAATAAATCT  64 436
 C1O54_07355 1678488 .. 1678504 +  -7.3  -4.56775   GTTTTATTGGGCAGG              GAAAGCG CAT CGTTTTC              TTTTTAGCAAAAAGT  79 46
 C1O54_07360 NONE
 C1O54_07365 1680508 .. 1680525 +  -8.5  -3.36341   GGGGAGGGAACTAAT             CCTGTTT CAAG AAACAGG              TGTTTGCAGGATATT  65 43
 C1O54_07370 NONE
 C1O54_07375 1683712 .. 1683745 +  -7.3  -3.01791   TGAGAACATGATTTT     CCCGGCAGGGGAAAG AATG CTTTTCCGGGCCGCG      TATTCGGAAAAAGAT  57 30
 C1O54_07380 1684478 .. 1684500 +  -4.1  -3.78775   GCTGCCGCTGTTGAA           CGGGGAAGG GTAAG TTTTCTCCG           TTTCCTGCTGCCCGG  54 13
 C1O54_07390 1687392 .. 1687411 + -13.6  -6.00086   CGTGTTTTCTTGAGA            CCGCCTGT GAAA ACAGGCGG             TTTTTTTTGTGATGT 100 48
 C1O54_07395 1688213 .. 1688223 +  -5.4  -3.55592   ACAGGTTGATTTCCG                 CATG CAG CATG                 TATTTCTGGCGTTCT  56 276
 C1O54_07410 NONE
 C1O54_07415 1693105 .. 1693115 +  -2.4  -3.33162   ATTGGGTTTGTGAAA                 GGGC GGG GCCG                 TTCTGCCATCAGATG  44 28
 C1O54_07420 1695446 .. 1695459 +  -2.3  -2.52896   GACCACGTTTTAACC               TTGCG TTTC CGCCA                TGAGTTCCCCCGTCA  38 28
 C1O54_07425 NONE
 C1O54_07430 1699155 .. 1699167 +  -3.3  -3.23247   GAATATTGTTGCTTT                GACTG CTT CTGTC                CTGTTTTTTTGCTGC  46 153
 C1O54_07435 1700360 .. 1700374 +    -5  -3.40112   AAGGGCGGTGGTGGG               TTCATC CGC GATGAG               TATTTCCGGTCTGGT  54 509
 C1O54_07490 NONE
 C1O54_07495 1713629 .. 1713657 + -17.6  -5.74122   AGTTCATTGATGAAA        TCCGTTTCCGGA TGCGT TCCGGAAACGGA        TTTTTTTATGTCATG 100 51
 C1O54_07500 NONE
 C1O54_07505 NONE
        fusA NONE
 C1O54_07515 NONE
 C1O54_07520 1718325 .. 1718336 +  -4.4  -2.98942   ACCTCACATTGATTA                TAGG AAAA CCTA                 TCTATGTCCGCAAAT  47 52
 C1O54_07525 NONE
 C1O54_07530 NONE
 C1O54_07535 NONE
 C1O54_07540 NONE
 C1O54_07545 NONE
 C1O54_07550 NONE
 C1O54_07555 1722287 .. 1722301 +  -2.8  -3.72576   CACTTAACACAAGGA               GGAATA AGA TATGCC               TTTAATGCCCAAGAG  52 68
 C1O54_07560 NONE
 C1O54_07565 NONE
 C1O54_07570 NONE
 C1O54_07575 1723685 .. 1723711 + -19.5  -5.55769   CCTCAGGATTTTGAA         CGCCGTCCTCC GAAAA GGAGGACGGCG         TTTTTTATTGTCCGC 100 49
 C1O54_07600 NONE
 C1O54_07605 NONE
 C1O54_07610 NONE
 C1O54_07615 NONE
 C1O54_07620 1735597 .. 1735607 +  -8.2   -3.1552   CCACGTTGGTGTATT                 CCCC CAT GGGG                 TATTCGTCAATGACC  60 349
 C1O54_07645 1738279 .. 1738298 +  -2.7  -5.22039   GGGAATCAGGCCGGA            GTGGCGC AAGGGG GCGCTTC             TTTTTTCCATTTCCC  80 40
 C1O54_07655 1739769 .. 1739797 + -13.1  -3.93216   TTCCGTTTTTCCGGG        CCTCTTCCCGCCA TGT TTGCGGGGAGGGG        TTCTTCTCGTTTGAC  87 68
        trmB NONE
 C1O54_07665 NONE
        yajC 1741947 .. 1741981 + -12.1  -4.85782   TCCGTACGTTTCCTG     CATCCGCCCGTGTCG CCCGT CGGCAGGGGAGGATG     TTTATTTTTGAAACC 100 53
 C1O54_07675 1742890 .. 1742902 +  -2.7  -3.21595   AAGGATAAAGGTACG                GAGTA ATT TATTC                TTCATGATGGGGATT  46 20
 C1O54_07680 NONE
 C1O54_07685 NONE
 C1O54_07690 1744888 .. 1744911 +  -6.6  -5.08731   TATTATTTTCCTGAA          GGCGTTCCTT TAAT GGGGATCGCC           TTTTGTTGTTTCTTG  91 56
 C1O54_07700 NONE
 C1O54_07705 1747328 .. 1747344 +    -8  -3.14026   TGAATGGTGCCGCCC              TGCCTG CTTGT CAGGCA              TTAAGTATGCCTGTA  62 94
 C1O54_07710 1747840 .. 1747854 +  -2.8  -2.79291   GTGGGACGCCCTCAA               TGAACT GGG AGATCA               TCATTAATCACCTTT  41 4
 C1O54_07715 1748141 .. 1748172 + -12.4  -2.60075   CTATCATATAGACTT      TCCAGCCGCTTTTGC TTC GCAAA-GCGGCTGAA      CTTGCTTGAAGCGGA  73 90
 C1O54_07720 NONE
 C1O54_07725 NONE
        ybeY 1751513 .. 1751528 +  -5.4  -4.09685   CATGACCGCTGCTCC              G-GCGCT TAA AGCGCGC              TTTTCAAAGATCCGG  63 17
 C1O54_07735 1751668 .. 1751703 +  -7.6   -5.2894   GTTGGACGTGCCATT    ATAAACCCCGTAAACT GAAA GGTTTGCGGGGTTTCC     TTTTCTTTTGTCTTT 100 28
 C1O54_07740 1753346 .. 1753357 +  -2.2  -3.96483   ACCTTTACTTAGAAC                GCTT AAAG GAGC                 TTCTTTACGTGCAAT  54 511
 C1O54_07760 1755849 .. 1755901 + -18.8  -4.07455   TGTGATACTAAGTCA C-GTTTTGGACTTGTCAATAGCCAC AGTT GTGGCTATTGACAAGTCCAAGTTAG TTTGTAGTATTACTC 100 117
 C1O54_07765 1756411 .. 1756430 +  -2.8    -4.254   ATTTGAAATACTTGT            CCATCTAT TTCC ATGGAGGG             TTTGTTCAATATTGA  59 35
 C1O54_07770 1757088 .. 1757111 + -12.4  -3.13403   ATGGCAATAAAAAAC          CGCCCGCGTT TCCC AACGCGGACG           TATTACTAGAAAAAA  77 163
 C1O54_07785 1759188 .. 1759208 +    -4  -3.53091   TGAGCTTGTCGGCGG           CGGCCTGGA TTTT TTCAG-CCG            TTTCCACGGGGAGCT  50 92
 C1O54_07795 NONE
 C1O54_07800 NONE
 C1O54_07805 1760895 .. 1760912 +  -4.3  -3.22298   GTCGATTGAACCTGA             TTAAATA ATAA TATTTAA              TTGATAATAAATAAG  50 70
 C1O54_07810 1761442 .. 1761461 +  -6.4  -2.88249   GAAAAAACTGACGCT            TGTCAGTC AAAT GACGGACA             TGTGTCAGACATATG  52 60
 C1O54_07815 NONE
 C1O54_07820 1763608 .. 1763625 +  -4.9  -4.26351   GCATTCAGGATGCAG             GAAG-TCC CCA GGAGCTTC             TTTCTTCCGTTGCTG  65 401
 C1O54_07855 NONE
        pssA 1773795 .. 1773825 +  -7.4  -5.00616   TGTGTTGTTGCCGCG       GCCCGGTTCCGGGA ATG TCCCTGGGTCCGGC       TTTTTTAAGGGCGGG  87 112
        folP NONE
 C1O54_07875 1778112 .. 1778128 +  -4.4  -4.10429   CGGTGGCCGGATTGG              CGGGAA AAGGC TTTCCG              TTTTGAAGGATGGTT  61 138
        ispG NONE
 C1O54_07885 1780729 .. 1780752 +  -3.8   -3.5936   ACATGGAATTCCAAA          CACGGAAAGA GGAA TCTATCCATG           TTTACACACTTTCCA  52 143
 C1O54_07890 1781839 .. 1781850 +  -4.4  -3.72893   CAGCGTTTATGTGCT                GCAT TGTA ATGC                 TTTGATAGGAAAATG  56 17
 C1O54_07895 1782121 .. 1782137 +  -3.5   -4.9725   AGGGAATGTCCTGTT              CCGGCGG TTC CGGGCGG              TTTTTGTCTGGAGCT  74 46
 C1O54_07905 NONE
 C1O54_07910 1785921 .. 1785934 +  -3.1  -4.93365   CTGCTGCATGGGAAG               TAACG CAGG CGTTG                TTTTTGGTTCTCCGC  73 23
 C1O54_07915 1786657 .. 1786684 +  -4.8  -2.50113   TTTTTAGGAAGATCG        GCGATGAATGGC GGGC GCTCTTCATGGC         GTTCATGCCGTGATA  44 51
 C1O54_07920 1787262 .. 1787275 +  -2.3  -3.71848   GGTTGAGTGTTTTGC               CGGAG GGAG CTGCG                TTGTTCCTGAAAAGG  50 250
 C1O54_07925 1788119 .. 1788132 +  -3.8  -4.77165   GGATTGTCCCAGATA               CCAG TTTATC CTGG                TTTTATTCTGAAGAC  72 47
 C1O54_07930 1788749 .. 1788759 +  -2.4  -5.19251   TCTGCGGAGAGTTCC                 CCGC TGA GCAG                 TTTTTGTTCGTCTTC  79 417
        hypB NONE
        hypF NONE
        hypC NONE
 C1O54_07960 NONE
        hypE 1797881 .. 1797897 +  -6.5  -5.40072   ATTTTCTGGTGTATT              CATCCGC CAG GCGCATG              TTTTTTTCCACGCCG  91 510
 C1O54_07985 1803783 .. 1803823 +   -17   -3.0792   AAATAAGCAACCCCC T-TCCCGCCGGAGGGGGAA GCAA TTCCCTCTCCGGCGGAACA  TTACATCCCGTATTA 100 35
 C1O54_07990 1804185 .. 1804195 +  -2.6  -3.69621   ACACACATTCAACAT                 TATT TTA AATA                 TTTAACATTATGGCT  50 51
        groL 1805897 .. 1805920 + -19.6  -5.50925   GGCAATCGGCTTCAA          GGCTCCCCGG TTTT CCGGGGAGCC           TTTTTTATATTGCTT 100 65
 C1O54_08000 1806513 .. 1806542 + -20.1  -5.00616   CATTTAATGAAAGCG       GGAGGAGGGCGGA TGAA TCCGCTCTCCTCC        TTTTTTGAGGACCGG 100 56
 C1O54_08005 1808903 .. 1808938 + -20.4  -3.02263   TCTCCCTGTAATTCA    CGTCCGTGCCGGAAGC ATTC GCCGCCGGCACGGACG     TATTGCCCGGACTGT 100 43
 C1O54_08015 NONE
 C1O54_08020 NONE
 C1O54_08025 1811408 .. 1811445 + -17.3   -5.1244   CCATTAATGCCTTTA   CTCCTCTAATTGCGAAT TTTC ATTCACAATTAGAGGAG    TTTTTATCTTACTGC 100 52
 C1O54_08030 NONE
 C1O54_08035 1814314 .. 1814338 + -13.6   -5.4505   GGCATTTTTCCCATA          CCCGGCTTTC CGCAA GGAAGCCGGG          TTTTTTATTGGGCCG 100 41
 C1O54_08040 1815424 .. 1815440 +  -2.1  -4.74103   AAAAGATGACGGAAG              CGGTTCC GGA GGATGCG              TTTTTAGCTTGCGCG  65 32
 C1O54_08045 1816128 .. 1816157 + -13.7  -3.34715   TTTTGATTTTCATGA       GGGAACATGTCCGC TTG GCGGA-GTGTTCCC       TGTTTGCGGAAGCTG  84 77
         gap 1817440 .. 1817461 + -15.9   -5.5604   GGCGGGGATTTATCC           GGGAGGGCA GAAA TGCCCTCCC            TTTTTTATTCATTGA 100 136
         pgk NONE
 C1O54_08060 NONE
 C1O54_08065 1819971 .. 1820010 + -15.8  -3.53012   TTTTCCGGGACGGGC  GGTGTAGCGGCGGATGAAC ATG GTTT-TCCGCCGCTCCGCC  TTTGAAGAGGGAAGA 100 63
 C1O54_08075 1821677 .. 1821704 + -15.5  -4.40804   CTAACATTTTTTATC        CTGGCCGCGGC GTGAAA GCCGCGGCCTG         TTTTGTGCCATCATG 100 42
 C1O54_08080 1822550 .. 1822564 +  -2.1   -3.9279   ACGATTTTTCAAAAT              TGACCC TTAC GGG-CA               TTTATGGGCTTAACT  53 131
 C1O54_08085 1823476 .. 1823496 +  -4.7  -4.73108   TTTCCACCATGGAGA            TGTTGGCAT GAG ATGCCAGGA            TTTTGATTTTGTGGG  74 319
 C1O54_08110 1832389 .. 1832400 +  -4.4  -3.43774   TACAGAAGTTAAAGA                TGCT CCGG AGCA                 TTCCCTTTTCTGTCC  52 29
 C1O54_08120 1834555 .. 1834571 +  -2.2  -4.15044   CCACCTGTTGTATCC             GCAGGGG GTTG CTCC-GC              TTTATTGACCGGGCG  57 1
 C1O54_08135 1836931 .. 1836943 +  -3.3  -2.75064   GAGCGGTATTCTGGC                GCAGG CTT CCTCC                TGATTGGCTGGGCGG  41 10
 C1O54_08140 NONE
 C1O54_08145 1837275 .. 1837298 +    -6  -5.42198   CCGACCATTTTAAAG          CCTGTGGATC AAAT GATTTACGGG           TTTTGTTTTTTGAGC  95 34
 C1O54_08155 NONE
 C1O54_08160 1839816 .. 1839846 + -17.6   -4.2349   CGAATACATGACAAA       GGCCTCCGGTGCGT TGA GTGTACCGGAGGCC       TTTTACATATGGGGA 100 58
 C1O54_08170 1842408 .. 1842435 + -19.2  -5.39721   TGATTTGCTCTTGCG        CCGGGTTTCCCG TTTT CGGGAAGCCCGG         TTTTTTATGTCCTGA 100 44
 C1O54_08175 NONE
 C1O54_08180 NONE
 C1O54_08185 1849118 .. 1849130 +  -4.1  -4.58283   TGCGGGGTTTTTCCC                GGAAG CTT TTTCC                TTTTTCAGAGGATTC  69 64
 C1O54_08195 1850367 .. 1850384 +  -9.1  -3.12142   AATGCACCGGACCAG             CGCCAGGG GGC CCC-GGCG             TGTATTCCATGTCCG  63 321
 C1O54_08210 1853131 .. 1853154 + -16.8  -3.83026   GCCGCCGTGTTCAAA          GCCTTTGCCG GAAA CGGCAAAGGC           TTTGCTGTAGGAAGG 100 69
 C1O54_08215 NONE
 C1O54_08220 1854410 .. 1854433 +  -5.3  -4.13767   GGATTCATGACTAGG         GC-GCGCA-CG ATGG CGATGCGCTGC          TTTTGGCCTCCGGAA  64 429
 C1O54_08240 1858065 .. 1858081 +  -3.7  -3.10612   AAGACACTTTCAAGA              CGATGAA TGA TTCATCC              TATATTCCGGTTGAC  46 57
 C1O54_08245 NONE
 C1O54_08250 1860017 .. 1860030 +  -3.7  -5.08601   AAGCCAGATGGCGCA               GGGCG CTGG CGGCC                TTTTTGTTGCCGTGC  79 210
 C1O54_08280 1867805 .. 1867818 +  -5.2  -2.74144   AAACGGCCTGCCCTG               CCGC AGGTAC GCGG                ATTTCGCCATGCAGG  47 378
        hisA NONE
 C1O54_08295 1869162 .. 1869179 +  -2.5  -3.59305   CCGGAGCTTAGGAAA             GCCGGGC GGAA GGCAGGC              ATTTTCTTTATGCGT  47 30
        grpE NONE
        dnaJ NONE
 C1O54_08310 NONE
 C1O54_08315 NONE
 C1O54_08320 1873227 .. 1873239 +  -4.8  -4.08216   GATATGGACGGATGG                CGTC CATGT GACG                TTTTCCACAACATCA  61 452
 C1O54_08350 1879717 .. 1879734 +  -7.7  -3.20723   TTCCGGACTGAACTG             CCGG-AGC CGT GCTACCGG             TTCAGTTCATCCCAC  61 30
 C1O54_08365 NONE
 C1O54_08370 1883197 .. 1883224 +   -17  -5.93809   TTCTTCTTTTACCGG        GTCCGGAGCCGT TTTT GCGGCTCCGGGC         TTTTTTTTGTCGCCA 100 56
 C1O54_08375 1884582 .. 1884636 +  -5.9  -3.55801   GATATAGCGGAAATG GCGTTTACGGACGGGATGG-ATCAA GTATGTG TTGATTCCATCCTGCCCGTCAG-GC TTTCCGGCCGTTGAT  59 73
 C1O54_08380 NONE
 C1O54_08385 1886340 .. 1886365 +  -5.4  -4.72272   TAATCTATAAAAAAA         GAACCG-CCCC TTCAC GGAGACGGTTC         TTTTTGATAAGAAAG  73 344
 C1O54_08395 1887050 .. 1887062 +  -6.3   -5.0538   ACGCCGCAGATGAAT                TAACG ATG CGTTA                TTTTTTGGAATCAGG  81 93
 C1O54_08415 NONE
 C1O54_08420 1891238 .. 1891267 + -13.7  -5.00616   GTTTTGATTGCTTTT       CAACCGTATCCTG GAAT CAGGATACGGTTA        TTTTTTGCGGAAGCA 100 84
 C1O54_08445 NONE
 C1O54_08450 NONE
 C1O54_08455 1898847 .. 1898871 +  -7.9  -3.67611   TTCGGGATGGCGGCT          CCAGTTCCGAG ACA TTTGGAATTGG          TTCTCTTCCCGTGCC  67 102
 C1O54_08470 1902462 .. 1902489 +  -7.7  -3.81154   GCGGCCAGGGTGAGC        CATACC-GCCGG AAGTA CCGGCAGGAATG        TTTCATGGATGTTTT  67 338
 C1O54_08495 1906331 .. 1906341 +  -4.6  -3.53012   TCCATATGCCAAACT                 GGGC CTT GCTC                 TTTACCCAGGCCAGG  52 384
 C1O54_08510 1908902 .. 1908958 +  -2.2  -3.88001   GAATAGCCTTCCGGT TCCCGTCCCATTCCCCGCAGAG CTTTCGGATTATT CTTTCCGGGGCATGGGGGCGGA TTCCTTTTTATGCCG  53 35
 C1O54_08515 1910030 .. 1910053 + -16.8  -3.84278   TCCTTTTCCTTTCAA          CCCGGTTTCC CTGT GGAAACCGGG           TTATTCATTGCCTTT 100 54
 C1O54_08520 1912657 .. 1912691 + -24.4  -4.15044   TGAGCCGTTAAATCT     CTGACCGGGGAAGGCA GAA TGCCTTCCCCGGTCTG     TTTCTTGGAAAGAGA 100 51
 C1O54_08525 1913225 .. 1913255 +  -7.5  -3.70902   CTTCACTGCCTCTGC      GGCCTTC-CGGTCC TCTG GGAGCGCGGGGGCC       TTTAGCTCTGGGGCC  67 330
 C1O54_08545 NONE
 C1O54_08550 1918388 .. 1918419 + -12.2  -5.45652   AACATCCTGTTATAC      CCCGCTCCGGCCTT TTAT GAGGCCGGAGCGAA       TTTTTTATTGGAAAT 100 54
        fabD 1919454 .. 1919479 +   -14  -5.46657   ATAAGAGGGGGTAAA         CCGCCGGC-CC GTTGG GGAGCCGGCGG         TTTTTTGTTAGCGTG 100 50
 C1O54_08575 NONE
 C1O54_08580 NONE
 C1O54_08585 NONE
 C1O54_08590 NONE
 C1O54_08595 1929491 .. 1929508 +  -5.5  -4.07568   GCAGTCCCAGGGCGA             TGCCTCT GGGC AGCGGCA              TTTTGCGGGCGACCC  64 473
 C1O54_08610 1932951 .. 1932976 +    -4  -4.63218   GGCGGAAGCAGGGAT         TTCCG-CATGG CGATT CCTTGCCGGAA         TTTTGTTGGACAGGA  69 202
 C1O54_08620 NONE
 C1O54_08625 1934619 .. 1934637 +  -2.3  -3.48593   TACGCGCAATCTCGC             TTTCCGC CGTTA GCGGGCA             TTATCTGAAGACCTC  46 13
 C1O54_08630 1935758 .. 1935771 +  -5.2  -3.52689   GGGAAACCGGGGAGG               GCGG AATCGG CCGC                TGTTGCTTTTTGTCT  56 51
 C1O54_08635 1936547 .. 1936561 +  -2.8  -3.03811   GTACGGCATGGGCGT               CCGT CTCAATC ACGG               TAATTTCCCTTTTTC  44 8
 C1O54_08640 1937624 .. 1937634 +  -2.4  -5.46657   GTGAATTTTCTCGTT                 CCGG ACA CAGG                 TTTTTTCTTGGAGTA  80 80
 C1O54_08645 1939958 .. 1939986 + -21.1  -5.64274   TTCACGGAAAACGGA        GGGAGTCCCGCTG TTC TAGCGGGACTCCC        TTTTTTTCTGGCTGA 100 54
 C1O54_08650 NONE
 C1O54_08655 1942591 .. 1942620 + -11.6  -6.09196   ACCATTTTTCAAGAA       CTGCTTTGATTC CTCCGA GAGTCAAAGCAG        TTTTTTTATTTTCAA 100 498
 C1O54_08660 NONE
        trpD NONE
 C1O54_08670 NONE
 C1O54_08675 NONE
        trpB NONE
 C1O54_08685 1949054 .. 1949083 + -17.3  -5.23292   CCTGGCTTTTAAGGA       TAGGCCTGCGCAA CTTA TTGTGCAGGCCTA        TTTTATTTTATCTGG 100 55
 C1O54_08690 1958891 .. 1958916 + -20.5   -5.1675   TCAGCCAATTGGAAA         GCCGCTGCGGA ATCA TCCGCAGCGGC          TTTTTTCATGAATGG 100 52
 C1O54_08710 1963507 .. 1963525 +    -3  -4.18702   CCCAGGAGCGCCGCA             TGGCGGGA GAG TCCCTCAA             TTTCTTCCAGATTAT  58 310
 C1O54_08725 NONE
 C1O54_08730 NONE
 C1O54_08735 1969986 .. 1969996 +  -2.4   -4.3534   CCATGAGGGGAGTCT                 CTCC GGC GGCG                 TTTTGATGGTTGACG  60 275
 C1O54_08745 1972740 .. 1972759 +  -5.7  -3.97947   AGGGGATTCCTGTAC            GCTTTCC GTGAGG GGAGAGC             TTTCTGATGGCTGGG  66 280
 C1O54_08750 1973507 .. 1973532 + -15.5  -5.36441   GTTCCCTTTTACCAA         CGCCGTGTTCC ATGA GGAATACGGCG          TTTTTTATGTGAAAG 100 49
 C1O54_08755 1975134 .. 1975161 +  -7.7  -3.22653   TCCGCGCTGACCTTG        GGCTTCGCCAGC TTTTC GCAGGC-AAGCC        TGTTCTCAAGCTCGT  59 295
 C1O54_08780 1978660 .. 1978692 + -17.2  -2.76941   CCTAAAACAGCATGG      CAAAAGGGGATGGT CGACC GCCATCCCCTTTTG      TGCGTTTATTCAGTT  95 76
 C1O54_08800 1982359 .. 1982374 +  -4.8  -3.99324   CTTTGTTCCAGTCTT              TTCTTA TGTA TAAGAA               TTTCTCATGATAAGC  61 275
        rpmI 1982848 .. 1982865 +  -6.9  -3.53811   CTAAACCGCGGAAAC             GCTCGAC TAAT GCCGAGC              TTTCCCCCCGCTGAA  62 37
 C1O54_08810 1983410 .. 1983439 + -20.9  -4.34402   GTAAACGTTAACCGA       CAGCCTCCGGAAA ATTA TTTCCGGAGGCTG        TTTTCATGTCCGGAC 100 66
        rseP 1985426 .. 1985451 +  -5.4  -3.63768   AGCCCGGTATTCAAG         GCCGTCGCGGA TTAGT TGCG-GACGGC         GTTTTTATTCCGGCT  56 11
 C1O54_08820 1987080 .. 1987096 +  -4.3  -4.01493   GACAACCGGCACTCA              CCGGATT GTT GAACCGG              TTTACTCTCTTTTGT  61 247
 C1O54_08825 1987933 .. 1987956 +  -6.7  -5.95539   GCCTTGTTATCAACG          CCGCTCC TAATTCACAC GGAGCGG           TTTTTTTATTTGGCG 100 57
 C1O54_08860 2004942 .. 2004955 +  -3.8  -3.22102   CAGCATTAAAAACGC               GAGG ATTTTG CCTC                TCTTGTGCGAGGTAT  48 66
 C1O54_08865 2005881 .. 2005895 + -11.4  -3.23532   AGCTTCCGCGTTTGC               GCCGGA ATT TCCGGC               TGTCTTCGTTTAAAT  76 120
        tsaB NONE
 C1O54_08890 2010033 .. 2010057 + -14.3  -4.56358   GTTTTAATCAGGAAA          GGCGCCGGA TATTACT TCCGGCGCC          TTTTCTGTAAGTGTC 100 44
 C1O54_08900 NONE
 C1O54_08905 2012190 .. 2012200 +  -2.4   -5.5112   TCCAGAATTTCGTAA                 TCCC GGC GGGC                 TTTTTTGTTGGTGGA  86 445
 C1O54_08925 2014068 .. 2014082 +  -4.3  -3.88583   GTGGAACCGGTGCGA               TTCCT ATAAG AGGAA               TTTGTGACGAATTTC  59 4
 C1O54_08930 2014912 .. 2014951 +  -2.8  -3.65351   GGAATGGCCGTAAAT  GCGCTTGATGGCGGCAT CCTCTCC GTGCTGCT-TCTGGCGC  TTTAACTCAGCGTCC  50 289
 C1O54_08995 2029633 .. 2029671 +  -7.2  -3.10894   GCTGCGGGAGTAGTT   GACCTGCGCCGCTATTTC AGA GGCGGGGCGGCCCGGGTC   TTCGCTGCTCATGAT  57 400
 C1O54_09020 2034796 .. 2034807 +  -2.2  -4.07568   TCCTTATGTAATTTG                TGTC TTCC GGCA                 TTTTCCCAAAAGGAA  55 71
        sufT NONE
 C1O54_09040 2039596 .. 2039617 + -10.9  -2.80354   TCCTGTGGACCGGTG           CG-GCCCGAA TGA TTCGGGCGCG           GTTTGCGTGCATATC  69 61
 C1O54_09110 2056268 .. 2056281 +  -2.3    -5.055   ATCCGCCAGCGGTCC               GTGTC CTTG GTCAC                TTTTTTGGGGATTAC  75 508
 C1O54_09120 2059054 .. 2059079 + -13.3  -2.73622   TTTATTTTCTTCACC         TGCTTCGGCCA TTAA TGGCCGGAGCG          TGCTATCATTCTTAT  79 11
 C1O54_09125 NONE
 C1O54_09130 2060304 .. 2060320 +  -7.3  -4.84017   TCCGCAGCCTATGTC              CGTCATG CTC CATGATG              TTTTTCTGCGGGATT  83 411
 C1O54_09140 2064318 .. 2064344 +   -13   -5.1861   CACGGATAGAAAAAA         GGGCACGTTTTC GAA GGAAACGCGCCC         TTTTTTGATACTGCG 100 51
 C1O54_09150 2067694 .. 2067710 + -10.9   -2.7965   ATTCCTCGATAAACT              CCATCAG TTC CTGATGG              TCGTCTTCCGTTTCT  66 481
        dnaG 2072158 .. 2072177 +  -7.2  -2.83641   GTACAATGTAGTGCC            TCGATACC TCCG GGTATTGA             TATAATGGTGAATTG  56 30
        rpoD 2074290 .. 2074347 +  -7.1  -2.55437   CCTGACCGGATTTGC GCCGCATGCCGT-GCTACGCTTCGT GGTCATGAAG ACTT-GCGTAGCTGCGGTATGCGGC ATGTTCATGTTACTG  52 36
 C1O54_09175 2075074 .. 2075093 +  -6.6   -4.2123   AAGAATTTTACATAT            CAAATTTT TGTA AAAATTTG             TTTGTTAGCTGAGTG  71 41
 C1O54_09180 2075774 .. 2075788 +  -2.8  -3.03338   ACGAAGTAATATCTG               GAGG ATGAATG CCTC               TCTTAAAACGCTTCT  44 98
 C1O54_09185 2076410 .. 2076425 +  -4.6  -4.25104   GCCGCGCGTATCGGG              GGCCGT AAAT ACGGAC               TTTTGATGAAAAGGC  63 142
 C1O54_09205 NONE
        hrpB NONE
 C1O54_09215 2087196 .. 2087223 + -17.8  -5.47159   AGGTAGTTAGTTGGA        GCGGCTACGGGA GAAA TTCCGTAGCCGC         TTTTTTGTCTTCCCG 100 181
 C1O54_09220 NONE
 C1O54_09225 2090237 .. 2090247 +    -4  -3.94634   TTAGCATTATAAGCG                 TCAA AAT TTGA                 TTATTTCAACTCATG  57 29
 C1O54_09230 2092023 .. 2092036 +  -3.1  -3.05384   GCTGGAACTGTCTGC               CGTTT AGAG AAGCG                TTCCCTCCGGAGGGA  44 19
 C1O54_09235 NONE
 C1O54_09240 NONE
 C1O54_09245 NONE
 C1O54_09250 NONE
 C1O54_09255 2097927 .. 2097937 +  -2.4  -2.81584   GAGCCTGACGAAAAT                 GCCG TGA CGTC                 CGTTTTTCTTGTCAA  39 33
 C1O54_09260 NONE
 C1O54_09265 2099188 .. 2099200 +  -3.3  -2.52543   AGAAGTTAAGCGGCC                CGCCA TAC TTGCG                TCCATTGCCGAAGAT  39 265
 C1O54_09285 2103296 .. 2103306 +  -8.2  -5.08824   GTTCTCTTTCAACGG                 CGGC ACG GCCG                 TTTTTTCCGTAACAC  93 77
 C1O54_09300 2104697 .. 2104710 +  -8.1   -2.8742   GCATACAGGTCCGGC               GGCCA TCCC TGGCC                TGATTCCTCTTTCCG  60 9
        ilvB 2106750 .. 2106777 + -19.2  -3.05384   CTATTGAGCCTTAAA        CAGGAGCCGTCC GTAA GGGCGGCTCCTG         TTGCATGGCGGCGCA 100 59
 C1O54_09310 NONE
 C1O54_09315 2109975 .. 2109997 +  -7.6  -5.14965   CGGCTTCAAAGGATG           TGGCCGGGTT GAG AGCCAGGCCG           TTTTTTACTCCGGCT  88 455
 C1O54_09330 2115177 .. 2115187 +  -6.8  -3.17194   GCAGCGCTGTCCGCA                 GAGG GTT CCTC                 TTCCGTTCCGGCAGT  54 411
        nspC NONE
 C1O54_09345 2119280 .. 2119291 +  -3.6  -4.67942   AGGGAGCGTTTGTCC                CGTG CCGG CGCG                 TTTTCCTTTGTTGCG  68 67
 C1O54_09355 2122943 .. 2122957 +  -7.8  -3.06261   TCTGGCTCCGGCTCT               TCCCCT GCT GGGGGA               TGTTCCGGATTGGGA  59 101
 C1O54_09360 2123380 .. 2123407 +   -17  -3.94877   TGGAGAAGTTTTCCA        GCCGTGCGCCCT TTCC GGGGTGCACGGC         TTGTTGTTGCGGGCT 100 74
 C1O54_09365 2126109 .. 2126125 +  -4.3  -3.41988   TCCTGTTACTGCGCG              TACCGGA GTT TCCGGCG              TCTTCTTCCGTCCGC  52 73
 C1O54_09375 2129664 .. 2129674 +  -6.8  -3.15544   TGGTAACGGCGCTTC                 TCCC TCC GGGA                 TTGATCAAAATGGCG  54 438
 C1O54_09385 NONE
 C1O54_09390 2130869 .. 2130879 +  -3.2  -4.18762   TCGCGAAGCGGGGCA                 GGGA ATA TTCC                 TTTTGCATGGCCGTT  58 44
 C1O54_09410 NONE
 C1O54_09415 2135291 .. 2135315 + -11.4  -4.34737   ACTGGTAATAGAAAA          CCCTGGGAGC GTTTA GCTACCAGGG          TTTATTGATTGGTAC  91 256
 C1O54_09465 2145202 .. 2145219 +  -2.7  -4.26079   GTGAACGGTTCCGCG             CGGAAGA TGGG TTTTCTG              TTTTCCGTAGTTTCC  59 106
 C1O54_09470 2147400 .. 2147427 +  -4.9  -3.46141   ATAAAACCGGGTCAC        CGTCTCCTTTT TAAATT GAAAGGAGGTG         ATTTTTCATCATAAT  52 40
 C1O54_09475 2149851 .. 2149886 + -16.9  -3.05596   AATTGTTGAACTTTT    CAGGGCCGCTTCCTC CAGGAT GAGGGGGCGGCCTTG     TTGCGTCCGGACATC 100 50
 C1O54_09485 2152195 .. 2152225 +    -7  -4.08216   TTGTCGCCCTGTTGC       CCGTTAATAGTTAA CTG TTACCTATTAACTG       TTTTCCGGGGCGTCG  69 65
        lpdA 2153693 .. 2153720 + -14.2   -3.5013   TGTAATGGTTTTCAA        TGGAAGGGCCCC AGCC GGGGTTCTTCCA         TTAATTCCTTTGCCA  89 36
 C1O54_09560 NONE
 C1O54_09565 2171523 .. 2171541 +  -9.5  -5.54338   ATTATGTAAATTAAA             GGCTCGC TGTTT GCGGGCC             TTTTTGTTTTGCTTC 100 60
 C1O54_09570 2172831 .. 2172849 +  -7.4  -4.26076   TTGGAAAAAACACTC             CGGAACAG GTT CTGTTGCG             TTTTGATGCGGCTGA  74 359
 C1O54_09590 2177545 .. 2177561 +  -4.4  -3.55622   ATTGACTTCATTTTG              GGAAGC GTGTA GTTTCC              TTTCCACACATTACC  54 348
 C1O54_09595 2177693 .. 2177719 + -10.9  -5.27335   ACCTTTCTTTTTTAA         GAGCCTGCATT TCCAT GGTGCAGGCTC         TTTTTCTTTGCAAGC 100 43
 C1O54_09600 2179146 .. 2179160 +  -7.8   -4.4831   AAAAGGTGAAAAAGG               GGGGGT TAC ATCCCC               TTGTTTTTCATGGCT  79 216
        hisD 2182734 .. 2182748 +  -2.7  -4.69622   GCGCCGCCCGTGTGG               ACCGG TAATT CCGGA               TTTTTCCAATTCTCT  66 18
 C1O54_09620 NONE
 C1O54_09625 2185797 .. 2185820 +  -3.8  -4.78981   AGGTAGGATGCGAGG          GGCTTCGTAA GACG TTGCGAGGCG           TTTATTTTGCTTGAT  72 35
 C1O54_09630 2187841 .. 2187870 +  -5.6  -4.65895   TTCAGCTGCGGACTT       TGGCTTTCTGCC TTACAT GGCTGAGAGCCC        TTTTTCCATGAACCA  73 409
 C1O54_09640 2188382 .. 2188403 +  -8.1  -4.07568   CACCTGGTTTGTCTG           CC-GGATAAG CTG CTTATCCTGG           TTTTCCACCAGGGCA  73 338
 C1O54_09660 2198730 .. 2198764 + -24.5  -3.05596   TTCCTCCTGACCCTC     CAGAGCCGTTCCGGA ACAAC TCCGGAACGGCTCTG     TTGCCTGAGAGAATC 100 89
 C1O54_09665 2205059 .. 2205093 + -20.1  -3.05384   TTCCTCCTGACCCTC     CAGAGCCGCTCCGGA ACAAC TCCGGAACGGCTCTG     TTGCCTGAGGAAAAC 100 84
 C1O54_09670 2205574 .. 2205586 + -10.5  -2.57985   TTGAAATCCGTATCC                CGGCG TTC CGCCG                TCCATTCCCTTATCA  64 287
 C1O54_09710 NONE
 C1O54_09715 NONE
 C1O54_09720 2215829 .. 2215857 + -10.4  -5.00616   TTTTTTTCTTTTTCA        GGCTTTCCAC CCTTATAAA GTGGAAAGCC        TTTTTTACGGGCAGA 100 48
 C1O54_09740 NONE
        coaD 2219619 .. 2219643 +  -7.7  -3.93262   ATGCGCTGGATGACG          CGGGCTCTTGC GGC GCATCGGCCCG          TTTGCATTTGTTCCA  69 135
 C1O54_09770 2223656 .. 2223705 +   -18  -2.71712   GTTTACCGTTTTTAA GCGG-ATGC-TCCGCGGCCCTTTC ACCG GGAAGGGCCGCGGAAGCGTTCCCC CTTTCCGGGGGCGCA 100 26
 C1O54_09775 2224446 .. 2224464 +  -2.4  -5.00616   CTTCCCTTTTTTTCT             TATTCTGC GCT GGGGAATA             TTTTTTAAGGCCGCC  70 120
 C1O54_09780 NONE
 C1O54_09785 2227332 .. 2227351 +  -9.4   -4.8143   TGACGGCATCTGTTC            CATCAATG AGGC CATTGATG             TTTTTCACTTCTTCA  86 421
 C1O54_09800 NONE
 C1O54_09805 2233457 .. 2233481 + -11.4   -3.0806   ATGAATAGGCGCTTT          CCCTGCCGGA ACGTG TCCGGCAGGC          TGTTACCAATTTGCG  74 123
 C1O54_09845 2241792 .. 2241806 +  -2.8  -5.24129   GCGCCGCCTGGGGCA               GATCAA GCA TTGACC               TTTTTTATGGACCAA  80 13
 C1O54_09850 NONE
 C1O54_09855 2243369 .. 2243392 +  -2.2  -4.21194   CACCCCTCCGGCTAC          CTGGCCGCGG ATGT CCGCATACAG           TTTTCGGTAGTCGGA  60 146
 C1O54_09885 2249806 .. 2249819 +  -5.3  -2.87132   GGCTCTGGCCCCTGT               GGAAT CATA ATTCC                TCTCTCCGGCAGGCA  49 16
 C1O54_09890 NONE
 C1O54_09895 NONE
 C1O54_09900 2253780 .. 2253790 +  -4.6  -4.25283   TTTTACAAAAACGGG                 CGGT CTT GCCG                 TTTTCATGCCGAGAT  63 294
 C1O54_09910 NONE
 C1O54_09915 2259417 .. 2259427 +    -4  -2.66695   CAACCGCATGGAACA                 TTTC GTG GAAA                 CTCTTTCCTGACCGG  43 4
 C1O54_09920 NONE
 C1O54_09925 NONE
 C1O54_09930 2262636 .. 2262660 + -16.5  -5.45802   CGAAATTCCTTCAGA          GCCGTTCCGTT GAC AGCGGAACGGC          TTTTTATTTTCAAAA 100 64
 C1O54_09935 2264023 .. 2264041 +  -6.6  -4.81249   TCTTCTGACGCGTTT             CCGGAAGG GGA CTTCCCGG             TTTTTCCCTTTGAAC  82 213
 C1O54_09995 NONE
 C1O54_10000 NONE
 C1O54_10005 NONE
 C1O54_10010 2280170 .. 2280195 +  -4.1  -4.28018   GTACAGCTTCTTCCG         TACCGGGAAAAT AAA ATGTT-CCGGTA         TTTTCCTGAGCTATT  64 92
 C1O54_10025 2282541 .. 2282570 +  -2.8  -4.76075   CCAGCCGGATATCTT       GTTTGCAGCG GGGCCTTGTG CGCTGCCAGC        TTTTGTTGATCTCCT  70 174
 C1O54_10040 2285424 .. 2285445 +  -4.4  -3.53343   GGACGCATGAAAGGT           TCCGGC AGGAATGGGC GCCGGA            TTTCCAGAGGGGCTT  54 154
 C1O54_10045 2285759 .. 2285770 +  -7.2  -3.06969   CATTCTGGCGTGGCC                GCCG GGAC CGGC                 TGTTGAAGTAGCTTC  59 144
 C1O54_10050 2286164 .. 2286198 +  -4.9  -4.58395   TGAATGAAGAAAGAA     GAAGGCATGGTACGC GGCCG GCGTCCTTTCCCTTC     TTTTTCCGGAATCCG  68 148
 C1O54_10055 NONE
 C1O54_10060 NONE
 C1O54_10065 2289386 .. 2289399 +  -5.2   -2.5038   CTGAAACCGCTGCAG               GCCG TTTAAT CGGC                AATTTCCTTTTTAGC  47 17
 C1O54_10070 NONE
 C1O54_10075 NONE
 C1O54_10080 NONE
 C1O54_10085 2293803 .. 2293816 +  -2.3  -2.77013   TAGGAAGTGATGCGG               TCAGG CTTG CCGGA                ATTGTTGAAAAAATA  39 61
 C1O54_10090 NONE
 C1O54_10095 NONE
 C1O54_10100 2295891 .. 2295925 + -22.2  -4.20025   AGATAAGAACGCAGA     GCGGCCGGGATTCCTC ATT GGGAAATCCCGGCCGC     TTTCTGTTGCGGATT 100 89
 C1O54_10110 2297114 .. 2297162 +  -9.5  -4.29326   TGATTAAAGTCAGAA CAGCCTGAACCTCATTCCGGA AAAACAG TCCGGAATGGAGAACAGGCCG TTTCTTCAATTTGCG  87 18
 C1O54_10125 2301027 .. 2301037 +  -2.4  -4.08692   TTGCAAAAAATGCTG                 CCGG AAC CCCG                 TTTTCCGGCAAGTTG  55 59
 C1O54_10130 NONE
 C1O54_10135 2303538 .. 2303555 +  -2.7  -4.08394   ATGAAAGCCGGGTAA             TTCTGTA TTGT TACAGTA              TTTTCCAGGGAATAT  56 46
 C1O54_10145 NONE
 C1O54_10150 NONE
 C1O54_10155 2309367 .. 2309380 +  -8.1  -2.52516   AGCAGGAGCGGCTTA               CGGCT GTTC AGCCG                CTTCCTCATGGGAAA  58 42
        nagB 2312115 .. 2312147 + -16.3    -5.626   TTGTAGCAACGGAAA      CGCCGTCTTTCCCTG TTT CGTGGAAAGGCGGCG      TTTTTTTATGGGATG 100 48
 C1O54_10175 2314350 .. 2314371 +  -4.5  -3.52652   AACACACCTCAGACG           TGATGAAAA GAGA TTTTCACCA            TTCTCATTGAATCCA  54 270
 C1O54_10190 2316569 .. 2316587 +  -2.4  -2.89475   GGTGAAAATATTTTT             TTTGGGAA ACT TTCCTGAG             TATGATGTCTCCCTC  41 150
 C1O54_10195 2317762 .. 2317772 +  -3.2  -3.02263   CCCAGTAGTATCAAA                 TCCT TAA GGGA                 TGTTCCGGAAGATAT  42 140
 C1O54_10200 2318749 .. 2318761 +  -9.1  -2.91735   CCGGCTCCGTCCCGG                CGGTG CAG CACCG                TGTCTCCGATCTTGA  63 233
 C1O54_10210 2322841 .. 2322856 +    -6  -3.72576   CTGTAAATTCAGAAT              GCCCCG TTTA CGGTGC               TTTCCTGCAGGAAAA  62 143
 C1O54_10240 2330696 .. 2330712 +  -7.2  -2.98823   TGCTCCGGGCAAGAT              TGCCGC GGGGG GCGGCG              TATATATCCCGCGAA  57 124
 C1O54_10245 2332818 .. 2332845 + -17.8  -5.95539   CGGTAACATGTTCAA        CGGGCCGTTTTC GTTG GAGAACGGCCCG         TTTTTTTGTTTCCGG 100 51
 C1O54_10255 2334163 .. 2334177 +  -4.2  -3.21934   GCGGCAGGGGAATAG               CCGG GGTGGTG CCGG               ATTTTGTGAGGAAGG  49 211
 C1O54_10265 2334781 .. 2334796 +  -6.2  -2.91383   TTTTTTCTTGAAAAA              CCTATA CCCC TATAGG               TATATAAATGCCCGT  52 95
 C1O54_10270 2336770 .. 2336782 +  -3.3  -4.59773   TGATTGCCGGGAGGG                AACGG AGT CCGTC                TTTTTGACGCTCCGG  66 74
 C1O54_10275 NONE
 C1O54_10280 2339920 .. 2339969 + -19.4  -5.79595   GAAGTAAAAATTGTT CCGAAAGGCATGGCCGTCTTCC GTCGAA GGGGGAGGGCCATGCCTTTCCG TTTTTTATTTTAAAC 100 34
 C1O54_10285 NONE
 C1O54_10290 2341354 .. 2341366 +  -4.7  -3.90112   ATTGTGCGATCTGCT                GCGGC ATT GCGGC                TTTCCTTGGCAGGCA  59 68
 C1O54_10295 2342505 .. 2342524 +   -15   -5.4833   ATGAAATTAACGGCA            GCTGCCCC GCAT GGGGCAGC             TTTTTTATTCAGTGA 100 74
         alr 2346766 .. 2346786 +  -8.9  -3.81488   CAGAGCGCAGGGATC            CGGGGCTAC CCA GTGGCCCGG            TTCTATTTCCACAGG  71 213
 C1O54_10380 NONE
 C1O54_10385 NONE
 C1O54_10390 NONE
         def 2364568 .. 2364580 +  -6.2   -4.1466   ACGCTTTTTCCGGAT                CCGG CTGAA CCGG                TTTTCCAGATTCCCT  68 204
 C1O54_10410 2369964 .. 2369985 +  -2.1  -5.08824   CGGAGACGTGAACGC           CAGTCGTCC AGTT GGGCGAGCG            TTTTTTCCGTGCGGG  75 288
 C1O54_10420 NONE
 C1O54_10425 NONE
 C1O54_10430 NONE
 C1O54_10435 NONE
 C1O54_10440 2377300 .. 2377319 +    -5  -3.40403   AGATGATACGTCCGC            CCTTTCTG CGGA CAGAAACG             TTGTAATCGGAACAA  54 120
 C1O54_10445 2378030 .. 2378051 +  -6.5  -4.86133   TTTAAAACCAAGCTT           GTCCCGGTA AAAT TGCAGGGAC            TTTTTCATGTCTATG  84 250
 C1O54_10455 2379807 .. 2379831 +  -4.9  -4.11216   GTAATCCCCGTTCAG          ATTCAGCGTGG CTA CCACGTCGAAG          TTTTCCGGATGGAGC  61 460
 C1O54_10475 NONE
         tmk 2384638 .. 2384652 + -11.4  -3.53012   CCGCAATGACGAGCT               GCTGCG CCC CGCAGC               TTTCCGCAACCCCGG  75 403
        tatC NONE
 C1O54_10510 2391618 .. 2391635 +  -5.5  -4.09685   GCAAGGCGGTTCTCT             CCCGC AGCGGGAA GCGGG              TTTTGAACAATCCCG  63 85
 C1O54_10520 NONE
 C1O54_10525 2394020 .. 2394031 +  -5.8  -3.95073   TGATGCATTCCGCAT                CCGT CACT ACGG                 TTTCTCCCTGTGCGC  64 173
        rnpB 2396116 .. 2396131 +  -3.9   -3.4149   AACATCCGGGAATTT              GTCCC GTTCCG GGGGC               TCTTTGGGGTTGCAT  50 90
        murA NONE
 C1O54_10545 2397859 .. 2397885 + -16.6  -5.36441   GTACTTTTCTTTCAG         CACCCCCGTCCT TTG AGGACAGGGGTG         TTTTTTATGTCCCGC 100 64
 C1O54_10555 2400097 .. 2400131 +  -7.8  -3.65542   TTTTTTTAGGAAAAA     GCGCTTCCTCCAGG CGTTCGT CCCGGAAGAAGTGC     TCTTTTGAAGATAAG  67 160
 C1O54_10575 NONE
 C1O54_10580 2404105 .. 2404135 + -21.3  -4.14392   ATCAAAAAAACCGCA       GAGCCGCTTTCCC GATTA GGGAAAGCGGCTC       TTTTAGCAATTGAAA 100 52
 C1O54_10590 2406080 .. 2406097 +  -7.7  -4.07568   AACGTGACGGAATTC             CTGTTCC TGGT GGAACGG              TTTTAACAGACAACA  71 2
 C1O54_10595 2407097 .. 2407118 +  -4.5  -2.89687   ATTTAAATATTAACG           TCTGG-AGAA TTA TTCTACCGGA           ATTATATTTGGCATT  47 106
 C1O54_10600 NONE
 C1O54_10605 2409575 .. 2409587 +  -2.7  -4.69464   AATTATGTAGAATAG                TCTTG CCG TAAGA                TTTTTAAAATATTTT  66 231
 C1O54_10610 2410802 .. 2410812 +    -4  -4.68506   TTTTTAGTTTGCAGG                 GATA TTT TATC                 TTTTTGAGATTCCTT  68 68
 C1O54_10615 2412180 .. 2412235 +  -4.7   -4.4715   AAGATGCTGCCCGAA CGGCGGTTTCCCTGTTCATGGAATGC ACAGA GCATTCT-TGACGACCGGAGCCGCCG TTTTATACATTAAGG  68 54
 C1O54_10620 2413434 .. 2413451 +  -2.5  -4.38927   AGCCGTCGAGGAAAC             GCAGGCC GGGC GGGCAGC              TTTCTTGTATGGCAG  60 46
 C1O54_10630 2415384 .. 2415409 + -12.6  -3.64703   GCGGAACATGAAAAA         CCCCGGCCGTG CAAGC CACG-CCGGGG         TTTCCGTAAAAACAG  81 147
 C1O54_10645 NONE
 C1O54_10650 2418670 .. 2418696 +  -5.8  -3.96216   AACAAACCAGAACGG        CCCAGT-CGCC CAACAT GGCGTACAGGG         TTATTTCCGTACAGC  64 117
 C1O54_10660 NONE
 C1O54_10665 2421299 .. 2421319 +  -6.2  -3.20028   AAAGACGCCGTTCAT           TCC-ATCCG CATA CGGATAGGA            TAATTTTATACTGCG  55 2
 C1O54_10670 2423420 .. 2423438 +  -6.7  -3.62046   AACATGGAACACTCC            CGG-CGGA GCTT TCCGTCCG             TTGTTCCAAAGGTCA  62 46
 C1O54_10745 2440527 .. 2440564 +  -2.7  -4.57073   TTCCGGCCGTATCGG   TTTCCAGTTTG-TGGACG AGT TGTCCCTCCAACGGGAAA   TTTTTGAAAAGAATG  64 117
 C1O54_10770 2448261 .. 2448272 +  -4.4  -3.77832   CCGTTTCCGAATCGG                TTCC TGAT GGAA                 TTCTTCCCTTTCCCA  56 19
 C1O54_10775 NONE
 C1O54_10780 2450804 .. 2450830 +  -3.8  -3.28712   GTGCAATGTTCTATC        TTCA-CGGCAT CACAAA ATGCCGATGAG         TTCTCCCCGGAAGCC  48 127
 C1O54_10785 NONE
 C1O54_10790 2453251 .. 2453280 + -12.9  -5.26316   GCTTTTTCCCGTCAG       GCGGTCATTCCAT ATCC ATGGAACGGCCGC        TTTTTTATGCCCTCA 100 52
 C1O54_10805 NONE
 C1O54_10810 2456927 .. 2456953 +  -4.9  -3.35832   GAGGTAGAAAAACGC         CAGGCCGCCCC AAAAC GGAGGGGCCGG         ATTTTTACCCCATTT  52 93
 C1O54_10840 2462010 .. 2462038 + -17.6  -4.49556   TCCGGCAAAGGAAAA        GGCCTTAAAGCG TTAAC CGCTTTAAGGCC        TTTATTTGGTGGAGC 100 208
 C1O54_10850 NONE
 C1O54_10855 2463396 .. 2463430 +  -9.9  -4.52703   TTTCCAATACGAAAA     AACCGGACCTCCCCC CCTAT GGGAGAAGTCCGGTC     TTTTCTCGTCGTTTA  90 148
 C1O54_10875 NONE
 C1O54_10880 2470318 .. 2470334 +  -6.5  -3.55563   TATCACCGGGGCGTT              GAAAGCC AAA GGCGTTC              TTTCAAGGATAAAAT  62 85
 C1O54_10890 2472837 .. 2472861 +  -4.3  -3.66356   AACTATCGACAACCG          TACCATCTTCT CCC AAAAGAAGGTA          TTTGCCGTTAAAGAT  54 396
 C1O54_10915 2479841 .. 2479869 +  -7.5   -3.1085   AATGGAATCCGCATC       TGCCTGTTCCGG ACATCG CCGGAG-AGGCA        TATTCCCTCCGTTCG  59 71
 C1O54_10920 2480039 .. 2480055 + -12.3  -5.52096   GGGCTGCCAATCCAA              CCCTCCT TCA AGGAGGG              TTTTTTGTTGCCTTT 100 32
 C1O54_10925 NONE
 C1O54_10930 2482891 .. 2482916 + -16.9  -4.72272   AACTCTTTTTTCCGC         GCCGGTTCACG TTCC CGTGAGCCGGC          TTTTTCATGCGGCAA 100 58
 C1O54_10940 2484585 .. 2484609 +  -2.7  -5.09173   GGCCGCACGGGCAGT          TCCCTGTTCCG CCA CTGAAATGGGA          TTTTTTCCCCTGTTC  76 8
 C1O54_10950 2490334 .. 2490375 + -24.5  -2.71791   ATTCCAGACCCGCTC TTTCCGGGCGGAATCCGGC TGCT GCCGGGTTCCGCCCGGTGA  ATTTACGGAAAAGGT 100 55
 C1O54_10960 NONE
 C1O54_10965 NONE
 C1O54_10970 2493420 .. 2493445 + -19.1  -3.10017   TCCATCCGCTAAAAA         GCCCGTGGTTC CGAA GAACCACGGGC          TGTCTATTAACCCTT 100 351
 C1O54_10980 2496702 .. 2496727 +  -4.5  -3.53761   TTCCTGGTCCGCATC         CAGCCGGGCAG CCAT CTGGGCGGCGG          TTTCCGGGGCGGTTC  52 153
 C1O54_11015 NONE
 C1O54_11020 NONE
 C1O54_11025 NONE
 C1O54_11030 NONE
 C1O54_11035 2513217 .. 2513230 +  -9.5  -4.08767   CTCCATTTCCTCCGC               GCGCC GTAC GGCGC                TTTTCACCGCCTGAA  80 115
 C1O54_11055 NONE
 C1O54_11060 2517928 .. 2517949 +  -3.7  -3.12668   AAAATTTTTCCGGCA           TTTAGTCAG AAGT CTGCCTGAA            TATTAAGATTTCGGG  46 107
 C1O54_11065 2518488 .. 2518517 + -20.9  -3.06183   GCCGCTTCAACGCAA       CAAGGGCTGAACC ATCC GGTTCAGCCCTTG        TTGGATAAGGATGCG 100 71
 C1O54_11075 2521071 .. 2521090 +  -2.8  -4.24204   TTTTTTCCGCAAACC            CCAGAAAG GCCT TTTTCAGG             TTTTCCCTGTCAATG  61 338
 C1O54_11110 2530867 .. 2530897 + -13.2  -5.08367   GCTTCCTTCCCCAAC       GCCGCTCCCTGC CCACCCC GCCGGGGGCGGC       TTTTTCATTTCTCTT 100 57
 C1O54_11115 2531817 .. 2531829 +  -2.7  -2.50471   CAAATACTCAACCGT                TTTTC AGT GAGAA                GATTTTAAGTCTTTA  40 96
 C1O54_11135 2537126 .. 2537141 +  -3.3  -3.91897   AAATAAGGCACAGTA              CAATC ATACCG GATTG               TTTCTGCATAAAACA  54 327
         alr NONE
 C1O54_11160 2544988 .. 2544998 +  -2.4  -3.01966   ACCTTTTCCCATTCC                 GGCC CAT GTCC                 CGTTTTTTTTACCCG  41 70
 C1O54_11165 NONE
        cysK NONE
        thiE NONE
 C1O54_11180 NONE
 C1O54_11185 NONE
 C1O54_11190 2549692 .. 2549704 +  -7.7  -2.54896   GCTTTAATGCGCCCG                CGCTT TCA AAGCG                TCCGTTACATAGCCC  55 137
 C1O54_11195 2549798 .. 2549829 +    -8  -5.80817   GCTACCACTTCTAAT      AAAAAGGCCATCTC TCCG GAGGCGGCCTTTTA       TTTTTTTCTATTACC 100 34
 C1O54_11200 2551512 .. 2551523 +  -5.8  -4.56597   AACTGCCCCTCATCC                TGGC CTGC GCCA                 TTTTTCCCGCCCACA  73 115
 C1O54_11205 NONE
 C1O54_11210 2554316 .. 2554330 +   -10  -3.53811   CAATCTCGCGCCGCA               CGGCTT CCA AAGCCG               TTTCCCCCGGGTCAA  70 332
 C1O54_11220 2556438 .. 2556451 +  -2.4  -3.28712   GGGATGACATTTATC               CATG AACAGA CATG                TTCTCCCCCGCAAAC  44 181
 C1O54_11225 2557097 .. 2557108 +  -3.6  -4.63928   ATTTCAATTCGCGGG                CTGC AAGT GCGG                 TTTTTACGCTCATCT  68 82
 C1O54_11255 NONE
 C1O54_11260 NONE
 C1O54_11265 2566048 .. 2566073 + -21.9   -5.8096   AACTGCTCCATGAAG         GACGGGGCGGC CTTG GCCGCCCCGTC          TTTTTCTTTTTTATG 100 52
         cls 2569018 .. 2569041 +    -6  -3.61715   CTCTGCAACCTGGCG          CGACT-GACGG CCC CCGTCCAGTAG          TTCTTCCGGCGAATC  59 2
 C1O54_11285 2570698 .. 2570731 + -16.7  -3.65351   CTGCTCAAACCGTTT     GCGGGCAGTTCCCTT CATG GAGGGGACCGCCCGC      TTTGCATGAACGTCC 100 55
 C1O54_11295 NONE
 C1O54_11300 2574400 .. 2574423 +  -9.5  -2.79273   TACCCTACCTTGAGG          CCGGAAGGG AAGAAA CCCTACCGG           GTTATCTTCGCGGAA  65 214
 C1O54_11335 NONE
 C1O54_11340 2584557 .. 2584567 +  -2.6  -3.04864   TATTATACATTTGTT                 TAAT TAA ATTA                 TCCTTTCATTATGCA  42 95
 C1O54_11345 2585976 .. 2585990 +  -2.1   -3.2916   AAATAACCTCCCTTC              T-CCGG AGAC CCGGCA               TCTTCCCTTTTTCCC  44 35
 C1O54_11350 2589239 .. 2589249 +  -2.4  -2.72829   CCATGAATCATTAAA                 AGGG TAA CCCC                 CTTTGCAACCATCTG  39 19
 C1O54_11355 2590762 .. 2590790 + -18.9  -4.64861   CTGACTGTTTTTTCT        CCCTCCGGCAAGC ACA GCTTGCCGGAGGA        TTTGTTTTCCGGCCC 100 71
 C1O54_11360 2591123 .. 2591137 +  -8.6  -3.55622   TGTGCCGCCTCCCGC               CGGATT TCT AATCCG               TTTGCGGCAATTCGA  67 96
 C1O54_11365 2592136 .. 2592166 + -13.4   -4.7268   ACTTTTTCCTTACCG       CGTCCATTCCTG CTCCGTT CAGGGATGGACG       TTTTCTTCACTCTTT 100 40
 C1O54_11370 2595331 .. 2595341 +  -2.4  -4.72272   GAAAAGCATCCATCC                 CTCC CCG GGCG                 TTTTTCATGGAACGG  65 140
 C1O54_11385 NONE
 C1O54_11390 2599217 .. 2599229 +  -3.3  -3.17392   GGAATTCAGCGCATG                CTGGA ATC TCCCG                TTGACTTCCAGCGTC  44 171
 C1O54_11395 NONE
 C1O54_11400 2599968 .. 2599991 + -16.7  -5.26316   AACATTTTTTATCCT          GGCCGCGGC GTGAAA GCCGCGGCC           TTTTTTGTGCCATGA 100 44
 C1O54_11405 NONE
 C1O54_11410 2601679 .. 2601702 +  -3.2  -3.92522   CACCAATGCGGAAAT          CAA-GATGGCT CCC ACCCATCGTTG          TTTGTAACATTCCAG  54 251
 C1O54_11415 2603450 .. 2603479 + -17.9   -4.3739   CAATGTAAAACACAC       CAGAAGCGCCGGG TTCG CCCGGCGCTTCTC        TTTTCTACGGAAATG 100 63
 C1O54_11420 2603873 .. 2603885 +  -9.1  -4.07568   TTTCATTTCCTTCAG                CAGGG CAT CCCTG                TTTTCCGGAACAAGC  75 128
 C1O54_11430 NONE
 C1O54_11435 2606605 .. 2606615 +    -4  -3.32385   AGACCGCAATGAATA                 CATT CAA AATG                 TTCCTGTCATATATT  48 416
 C1O54_11455 2608484 .. 2608517 + -15.3  -4.84359   GAAACAATGACTATT     AAAAGCCCGGCGGAA AGCA TTCCGCCGGGCTTGC      TTTTTATAAGACTCC 100 375
 C1O54_11480 NONE
 C1O54_11485 NONE
 C1O54_11490 2613308 .. 2613364 +  -5.8  -2.98719   ACAGGCCGCCCCAGC CCACCGCCTCGTCGTC-CTCTTCATGCA CTC TGCAAGGAGTGCGACTAC-AGGCGGCGA TGTGTGATGTACTGA  52 229
 C1O54_11515 NONE
 C1O54_11520 2623969 .. 2623998 + -11.3  -4.65895   ACCGCTTCCATTTAC       GGGCTGCCCCGCC GAAA GGTGCGGCAGCCG        TTTTTCACTAAAAAA 100 60
 C1O54_11530 2624634 .. 2624655 +  -2.2  -3.54424   TGCTGAAGTGGAGCA           GCCAGGAAG ACAGC CATCC-GGC           TTTCCGGGCATGCAA  48 221
 C1O54_11545 2628718 .. 2628736 +  -3.1  -4.07687   CGGATACCTCCGCAT             CCGGT TATCTTTCC ACCGG             TTTTCCGGAGAAAGT  56 96
 C1O54_11560 2633012 .. 2633040 + -18.3  -5.32882   CAGTAAAAAATGTTG        TTGCCTGCAAGGT TCT GCCTTGCAGGCAA        TTTTTTGTAATCATC 100 56
 C1O54_11570 2635191 .. 2635214 +  -3.1  -3.34398   ACGGTCCGATTGCAT          C-GGACCGCT TCCCC AGGGGTCCAG          TATTTCCAAACAACA  47 99
 C1O54_11575 NONE
 C1O54_11580 NONE
 C1O54_11585 NONE
 C1O54_11590 NONE
 C1O54_11595 NONE
 C1O54_11600 2642498 .. 2642508 +  -2.6  -4.79223   GCAGGAATTCCCCTT                 TATT TAA AATA                 TTTTTCATAATCTCC  68 5
 C1O54_11605 NONE
 C1O54_11610 2644403 .. 2644422 +  -3.6  -3.87116   AAATATCCTTTATTA            GAAAAATC CATC GTTTTTTC             TTTAGATTATATTTA  57 72
 C1O54_11615 NONE
 C1O54_11620 NONE
 C1O54_11625 NONE
 C1O54_11630 NONE
 C1O54_11635 NONE
 C1O54_11640 NONE
 C1O54_11645 NONE
 C1O54_11650 NONE
 C1O54_11655 NONE
 C1O54_11660 2654676 .. 2654688 +  -4.7  -3.51633   TGCCTCAGGATTGTG                CCGGG AGA CACGG                TTCTGTCAGGTATAT  54 419
 C1O54_11665 NONE
 C1O54_11670 2656837 .. 2656849 +  -6.3  -2.65139   AAAACATTTTGAAAA                TCTTG CGC CAAGA                CTATTCTTGCATAAT  50 137
 C1O54_11675 NONE
 C1O54_11680 NONE
 C1O54_11685 2660291 .. 2660322 + -13.1  -4.67982   ACTCAACCAACGCAA      GCTCCGGCATG TGCCATCAAT CATGCCGGAGC       TTTTCTTAACTCCCC 100 58
 C1O54_11690 NONE
 C1O54_11695 2661956 .. 2661966 +  -2.4  -3.45592   ATCATCCTGAAAAAA                 GGCG TTA CCCC                 TCTTTCCTGACCATT  46 5
 C1O54_11700 2663280 .. 2663290 +  -8.2  -3.87977   TTTCCAGGGGACATC                 CGGC CCC GCCG                 TATTTTCTCCTGTTG  72 101
        menD 2667021 .. 2667045 +  -8.5  -4.56597   ACGGGCATGCAAAAA          CCGGGCGGA ACATCAG TCCACCCGG          TTTTTGCAACCGCCC  82 363
 C1O54_11720 NONE
 C1O54_11725 2674178 .. 2674196 +  -8.8  -3.21276   CCGCGGAAATAAATC             TTCCGGGA CAT TCCCGGCA             TATTCTCAGGCAAAA  67 69
 C1O54_11740 2676693 .. 2676711 +  -2.2  -3.92324   CGCAGAAATGCCACA             CTTTCCGG AAA CCGGCGTG             TTTCGTATTCCCGCC  53 64
 C1O54_11755 NONE
 C1O54_11760 2680943 .. 2680955 +    -2   -5.1383   CATGAATTTGGTTTC                TTGA CATTT TCAA                TTTTTGTATATTATT  74 83
 C1O54_11765 2681885 .. 2681899 +  -2.8  -3.63868   TCCCGATGTTTCTCT               CAAATG CCG CTTTTG               CTTTTATTTTCCAGC  49 84
 C1O54_11770 2683543 .. 2683555 +  -4.9  -3.17622   GGTCTGAGTCCAGAA                GATTT GAA AAATC                TCTCTTATGACCCTC  48 130
 C1O54_11775 NONE
 C1O54_11780 2684775 .. 2684789 +  -8.6  -3.53761   GGCCTGAAACTCCAT               CTGCTT AAA AAGCAG               TTTACAGCAGAATTG  67 18
 C1O54_11785 2685969 .. 2685984 +  -3.2  -5.40072   CGTATCTAATCAATC              TGGAAC TGGC GTGCCA               TTTTTTTCAACCACC  83 519
 C1O54_11800 2689549 .. 2689573 + -18.7  -5.02476   TTCATTTCTTCCCAT          GCCGCCGTTTT TCA AAAACGGCGGC          TTTTTTACGCCATCT 100 52
 C1O54_11815 NONE
 C1O54_11820 2693118 .. 2693148 + -11.1  -4.90217   GATGCAGGATGCACC       CAGACGCTCCCCG GATTG CAGGAAGCGTCTG       TTTTTCATCTCTTTC 100 84
 C1O54_11825 2693785 .. 2693810 +  -3.2  -5.14563   CCATTTGCGCCATGA         CGCATCCCTGG ACGGG CCGGAGA-GCG         TTTTTTCCTGAAGAC  76 61
 C1O54_11830 NONE
 C1O54_11835 2698112 .. 2698122 +  -2.4  -3.68619   ATTGAAAATCAAAAA                 TCGG TTC CCGC                 TTTCCATGAGTTCCA  50 36
 C1O54_11840 2699547 .. 2699574 +  -9.1  -2.95884   GCCGCCCCTTCCTCC        CCGCGGCA-CGG CCCTC CCAATGCCGCGG        TCTCTCCGTTCCTGA  63 56
 C1O54_11845 2701033 .. 2701059 + -13.8  -5.55769   ATTATTTCCTTCAAA         GCAGTTCCGC ATACATG GCGGAACTGC         TTTTTTATTGTCAGC 100 59
 C1O54_11860 2704063 .. 2704079 +  -3.7  -2.91383   TGGAAAATATTGATC              GCATTTC CCG GAAATCC              TGTCTAAATGGAAAT  45 58
 C1O54_11865 NONE
 C1O54_11870 NONE
 C1O54_11875 NONE
 C1O54_11880 NONE
 C1O54_11885 NONE
 C1O54_11890 2710298 .. 2710320 + -11.2  -5.27399   GCCCTCATCAAAAAA           CCGCCGGCAT TCC GTACCGGCGG           TTTTTTCATCTGTTG 100 61
 C1O54_11900 2711978 .. 2711996 +  -6.7  -3.29461   ACGATGCTTGAATTT             GTCCGAG AAATC CTTGGAC             TTGTCGGAAAAATTC  56 325
 C1O54_11910 2714733 .. 2714762 +  -4.2  -3.63744   GGAACCCCACGGCAA       TGTACACCTGGC AATCCA GCCAGGCATGCA        TCTTTTCCGGAGCCA  54 252
 C1O54_11925 2716635 .. 2716658 +   -16  -2.78384   TTTTACGGCTGCGGC          CCCTGCGCGG GCGG CTGCGCAGGG           TCTGGTACCCGGCCA  88 73
 C1O54_11935 2717610 .. 2717641 +  -5.9   -2.8805   CGCGGCAATAAATCC      TGGAGGACAT-GGC ATCCC GCTGATGTCCTCCC      TGTCTGCCGGCTGCT  52 30
 C1O54_11940 2717988 .. 2718002 +  -7.1  -3.38046   GCACTGCGCCGCTCT               TGCCG CCGGC CGGCA               TGTTTCACATGGGCC  60 140
 C1O54_11950 2720841 .. 2720864 +   -16  -4.77036   ACAAAATGATTCGCG          GCCGGAGTCC TTCG GGGCTCCGGC           TTTTTAATGCTCCGG 100 54
 C1O54_11960 2722437 .. 2722449 +  -3.3  -4.24342   TCAGGCGGCCCGCCA                TGGCA ATG TGCCC                TTTCTTGATGAACCG  61 344
 C1O54_11980 NONE
 C1O54_11985 2728841 .. 2728863 +  -9.8  -2.90496   CCGTCCATCGTTCTG           CCGTTCCCGG CTA CCGGAAATGG           TACTTTGGAGCCGGC  67 453
 C1O54_11995 2733194 .. 2733227 + -21.9  -3.14931   AATATAGTTGGATAA     TAAACCCGCACGGGG GAAA CCCTGTGCGGGTTTA      TTCATCCCCCCTCCC 100 219
 C1O54_12000 NONE
 C1O54_12005 NONE
 C1O54_12010 NONE
 C1O54_12015 NONE
 C1O54_12020 2736994 .. 2737016 +  -5.5  -3.01712   GAAGCCATTTTCCTC          CGCCTTGCGG GCTT CCGCACG-CG           TCTTCGGAACCACCC  48 154
 C1O54_12030 2740138 .. 2740159 +  -6.5  -3.28791   TCTAATCCGGGGCCA           TGCCGCTCCG GGC CGG-GAGGCA           TTCTCAAAAAAACGT  58 251
 C1O54_12065 2750835 .. 2750858 +  -5.2  -2.88366   GGCCGTTGAACCCTT          CGGAAACTCC AGTT GGAAATTCCG           CTTCTTCCTTGACAC  49 122
 C1O54_12070 2751943 .. 2751964 + -11.6  -4.61482   AGCCATTTCCTGCCG           GCAGGCGT CTAAGA ACGCCTGC            TTCTTTTTTCACCGG 100 55
 C1O54_12080 2753339 .. 2753384 +  -2.6  -2.71712   CATCAGCCTCCTGCC GGGAGAATTCCTGCCCTGATGCC GCG GGAA-CAGG-C-GGCAGTCTCCC ATTTGGGAAAACGGG  39 7
 C1O54_12085 2753631 .. 2753658 + -16.4  -3.61517   GGGAATTATGAATAG        GGTTCGCGTAGG TTTT CTTACGCGAACC         TTATTACAAAACCAT 100 82
 C1O54_12105 2757754 .. 2757781 +   -20  -2.72558   ATTTAAAAACAATTA        CCCCGTTTCGTC AATT GACGAAACGGGG         TAATTAGGAAATTCT 100 102
        secA NONE
 C1O54_12120 2768325 .. 2768344 +  -5.7  -3.72363   TTTTAATCCGTCCCC            GGCTACGG CTTCT CCG-AGCC            TTTCGGGTTTAGCTG  62 275
 C1O54_12135 NONE
 C1O54_12130 2768735 .. 2768762 - -11.4  -3.98107   CACTAAAAGTAACAA        GCCCCTTAAACC GTTG GATTTAAGAGGC         TTTGAAGATGGTAGC  86 34
 C1O54_12125 2768239 .. 2768263 -  -2.3  -5.40072   GCCCGCCGAAAAAAA          TATCATCAA CAATAAT TTGATAATA          AAAATCTTATAAAAT  80 233
 C1O54_12100 NONE
 C1O54_12095 NONE
 C1O54_12090 2753628 .. 2753661 - -12.5   -3.2827   GTAGGGAATTATGAA     TAGGGTTCGCGTAGG TTTT CTTACGCGAACCTTA      TTACAAAACCATTAC  81 261
 C1O54_12075 2751642 .. 2751656 -    -7  -4.08216   TCATGCGCCTCAAAA               CGGCGG TTC CCTCCG               TCAAGGAATTTGACG  68 320
 C1O54_12060 2748699 .. 2748721 - -14.2  -3.80746   CCGGTAAAAACAACA           GGACGGAGAT GAC ATCCCCGTCC           CAGCCGGCGAACCGG  93 503
 C1O54_12055 NONE
 C1O54_12050 2745195 .. 2745205 -  -4.6  -4.27316   GTTTCCAATCCAAAA                 CCGG GCG CCAG                 AACCGTTTCCACCGC  63 51
 C1O54_12045 NONE
 C1O54_12040 2741390 .. 2741416 - -18.1  -5.03994   TTTTATATACAAAAA         GGCGCAGGCAT TTTGG ATGCCTGCGCC         TTTTCCTCTCCCACA 100 56
 C1O54_12035 2740288 .. 2740308 - -11.9  -5.41359   AATGAAAGTAAAAAA            GAGGGGATA ATT CATCCCCTC            CTCACATAAAACCGG 100 85
 C1O54_12025 2736811 .. 2736842 -    -3  -4.05322   AAAGCTGGACAGAAA     CCGGCTG--CGCTC CCAGTT GAGCGATCATCCGG      AAAAGTTGAAGGGAA  56 45
 C1O54_11975 2724839 .. 2724862 - -13.8  -4.05788   GTTCCGGAAAGCAAA          GGCGCGGCCG TATT CAGCCGCACC           TGCCAGTTTCCATCC  93 51
 C1O54_11970 2723046 .. 2723084 -  -6.4  -4.63218   CCTCTGTCAATAAAA   CCTGCGGGTGAACATCCG GGG CGGCGGTCCTCCCGCCGT   GCGGAAGAGGCCAAA  76 51
 C1O54_11965 2722017 .. 2722034 - -10.5  -4.57073   CACGCGCTGGAAAAA             GCCAGGG AGAA CCCCGGC              GAATATCCTGTGCGG  93 207
 C1O54_11955 2720524 .. 2720534 -  -3.2  -4.25104   CCTGTTCCAGGAAAA                 CGGA GGC TCCA                 TGATCATGATTGCCA  61 445
 C1O54_11945 2717426 .. 2717442 -  -5.7   -3.1505   ATGACGGTGGAGGAA              TGGGCGG AAG CCACCCT              GATCAAGGACGCCCA  52 453
 C1O54_11930 2716569 .. 2716607 -  -2.9  -4.57073   CATTTCCCTTAAAAA   GCGAGACGGCATTCCGT GACGG ACGGTAAACCGGCCCCC   TGCCCTCCTATTTTT  64 167
 C1O54_11920 NONE
 C1O54_11915 2714458 .. 2714495 - -16.3   -5.0538   CCCCACGGCAAAAAA   CGGGAACCGGCCGTCCCT ATT AGGG-CGGCCCGTTCCGG   ACAAAAAATAAAATC 100 39
 C1O54_11905 2711790 .. 2711819 - -18.7  -4.96501   TTCCATAAAAAGAAA       CCCGGCATCCCATG CGG CA-GGGATGCCGGG       CTGCAGGCCACTCCG 100 73
 C1O54_11895 2710298 .. 2710320 - -12.7  -5.14563   GCCCTCATCAAAAAA           CCGCCGGCA TTCCG TACCGGCGG           TTTTTTCATCTGTTG 100 64
 C1O54_11855 NONE
 C1O54_11850 2701033 .. 2701059 - -13.8   -3.5393   ATTATTTCCTTCAAA         GCAGTTCCGC ATACATG GCGGAACTGC         TTTTTTATTGTCAGC  86 159
 C1O54_11810 2690144 .. 2690163 -  -9.2  -2.75562   ATAAACCGGGCAAAG            GGGGAAGG TTCA CCTGCCCC             AGCGTTCCGTAATGC  62 15
 C1O54_11805 2689162 .. 2689184 -  -4.6  -3.75505   CGTGAAAAAGGACAA           CGGCGGCCGC CTG GCGGACTTCG           TCTTTCAGTGCACGG  57 462
 C1O54_11795 2686770 .. 2686783 -  -3.8  -2.61831   GGGACGGGAAAAACG               CAGG TTCAAG CCTG                TTCAGGACGGATGCA  43 17
 C1O54_11790 2685792 .. 2685803 -    -3  -5.75945   ATCCCGCAAAAAAAA                GATA CCGG TATC                 TGCGTATTCGGATTT  91 181
 C1O54_11750 NONE
 C1O54_11745 2676450 .. 2676463 -  -8.1  -3.41527   CAACGGGGATTACAA               CGCCA GGGC TGGCG                GAGCGCCGGCAGGAA  64 404
        pyrE NONE
 C1O54_11730 2673970 .. 2673999 -   -13  -3.10018   AATAAAGGAGATACA       GGAATTGACCAG AATACG CTGGCCAATTCC        GGAGCCGCATTCGAC  75 257
 C1O54_11715 2667021 .. 2667045 - -10.7  -4.66163   ACGGGCATGCAAAAA          CCGGGCGGA ACATCAG TCCACCCGG          TTTTTGCAACCGCCC 100 91
 C1O54_11555 NONE
 C1O54_11550 2628701 .. 2628716 -    -9  -2.60496   CGCCCTGGGAAACAT              TGCGGA TACC TCCGCA               TCCGGTTATCTTTCC  61 31
 C1O54_11540 2627110 .. 2627147 - -12.8  -4.62069   TCCGTAGTCCAAAAA   GAGGGCCGATTGCACGA TCAAC TCGTGAAACCGGCCC-C   AATCATATTCCTGGA 100 51
 C1O54_11535 2624346 .. 2624360 -  -4.3   -4.0162   TCCGGACACCACAAA               TTCCA GAAAA TGGAA               AGAAGGCAGACAAGG  59 96
 C1O54_11525 2624126 .. 2624151 -  -9.7  -5.07652   CTTCTTAAAAGAAAA         CCCCGCAAGCC TTTA AACTTGCAGGG          TTTATTAATGGTACA 100 34
 C1O54_11510 NONE
 C1O54_11505 2619639 .. 2619674 -  -2.4  -4.69656   AATCACGGAAGAAAA    CGCATCCCTTGATTCCG TGA CGGAAGCAGGGGG-GCC    TTCCTGTCCATTTCC  65 61
 C1O54_11500 2615937 .. 2615949 - -10.5  -3.07895   TTTATGGCTAAGATA                CCCGG AAG CCGGG                ATTCAGGCCTTCCCT  71 46
 C1O54_11495 2613932 .. 2613949 - -11.3  -2.53015   ACATGTTTCAATCCA             CGCACTC GTGA GAGTGCG              ACTCCTGAACGTCTA  70 426
 C1O54_11475 NONE
 C1O54_11470 NONE
 C1O54_11465 NONE
 C1O54_11460 2608488 .. 2608513 - -20.5  -4.33105   CAATGACTATTAAAA         GCCCGGCGGAA AGCA TTCCGCCGGGC          TTGCTTTTTATAAGA 100 67
 C1O54_11450 2607324 .. 2607349 -  -8.2   -5.7946   GCCGGAACAAAAAAA         GAGCGCCGGA TTTTCT CCCGCCGCTC          CTGTTAATCAAGTTC 100 59
 C1O54_11445 2606801 .. 2606830 -  -7.9  -5.47159   CCGGAACAGAAAAAA       CGCCCGG-CTTCTC CTG AAGAAAACCGGACG       TTTTACAGCAAAGGA 100 53
 C1O54_11440 2606178 .. 2606208 - -13.2  -4.25104   CCGGCGTCACGAAAA       TACCCGGCCCCCCT TGC AGGGGAACCGGGCG       CTTTAACCATGAGCA 100 49
 C1O54_11425 2603452 .. 2603477 - -20.5  -2.85987   ATGTAAAACACACCA         GAAGCGCCGGG TTCG CCCGGCGCTTC          TCTTTTCTACGGAAA 100 328
 C1O54_11380 2596063 .. 2596080 -  -3.3  -3.14132   CCCTTCCTTCAGGAA             GGCGCGGG CTG CCC-CTCC             GCATCAGGAGGCATC  44 29
 C1O54_11375 2595252 .. 2595286 -   -33  -4.42386   CCCTGATGGACAAAA     GAAGCCCCCGCCGGCG CAA CGCCGGCGGGGGCTTC     CCATGCGGAAAAACG 100 103
 C1O54_11330 2580545 .. 2580603 -  -3.8  -5.10208   GAACGGGAAGAAAAA GGAAAAGCCATGAGG-GGCGCCCACGTCC CCTG GGAAG-GAGCGCCGCCCCTCAGCATT-CC GCACGCCATCTGGCC  78 16
 C1O54_11325 NONE
 C1O54_11320 2579895 .. 2579919 -  -7.7  -4.29106   CCGGATACTAAGAAA          TGGCGGGACGG CCG CAGCCCCGCTA          TTGGTGAAATAAAAA  76 61
 C1O54_11315 2578593 .. 2578619 -  -9.3  -3.16742   TTTAAGGGTTACCAA         CCGTACCGGGC CTTCC GCCCCGTCCGG         GACATTCAGCGGTCA  65 31
 C1O54_11310 2577089 .. 2577110 -  -4.3  -4.83169   ACCTCTCCATAAAAA           CAGGAGGGG GCGT CCCTTACTG            TTCATGGAGCCGCAT  74 20
 C1O54_11290 2570404 .. 2570414 -  -2.4  -4.08692   GAAGCTTGCGGAAAA                 GGGG CTC CCCA                 CGGACGACGAACACT  56 400
 C1O54_11275 NONE
 C1O54_11270 2566047 .. 2566074 - -18.4   -3.1506   AAACTGCTCCATGAA        GGACGGGGCGGC CTTG GCCGCCCCGTCT         TTTTCTTTTTTATGC 100 76
 C1O54_11250 2560946 .. 2560961 - -11.8  -5.15969   TCCGAATGCAAAAAA              GCCGCC CGGA GGCGGC               TGTTTTTCCTGAACA 100 44
 C1O54_11245 NONE
 C1O54_11240 2558917 .. 2558947 -  -4.7  -3.56837   TGCTAAAGAGTAGAA      CACGATTCC-GTAC AGCG GCGCGGGAATCGCG       GTCAGGAGATGAACG  54 27
 C1O54_11235 2557661 .. 2557679 -  -8.2  -2.79796   TTTCATTCCATCAGA             GAGAAACA TCA TGTTTCCC             CCTTCTTAGCGCCTG  59 31
        ruvC 2556626 .. 2556641 -  -4.7  -3.44527   CACGGATGACTACAA              CCAGA GCCAGT TCTGG               ATAGGCAATTTTCCA  52 518
 C1O54_11215 2553765 .. 2553788 -    -3  -4.22375   ACACCATTGAAGAAA          CGCTCTTCCG CTTC CGGGACAGCA           TGAAGGAATCCGGAT  61 221
 C1O54_11150 NONE
 C1O54_11145 NONE
        cas2 2538300 .. 2538330 - -13.5  -4.27316   GCCTTGAATCCAAAA       TAAGGCACAGTAC AATAG ATACTGTGCCTTA       TTTTTATGTTCAGCG 100 71
 C1O54_11130 2534576 .. 2534591 -  -2.6  -5.05712   ATAAATAAGGAAAAA              TAAACG CCCG CATTTA               ATATCATACTGTTAT  70 425
 C1O54_11125 NONE
 C1O54_11120 2531776 .. 2531796 -  -8.3  -5.23316   TATTACATCAAAAAA            TGCCCTG TCCGTCC CAGGGCA            AATACCAAATACTCA 100 63
 C1O54_11105 2526893 .. 2526920 - -20.6  -4.72272   CCCTGTCATGAAAAA        GCGCCGCCGTCC TAGA GAACGGCGGCGC         CCGAACACGCTAACC 100 51
 C1O54_11100 2525402 .. 2525425 -  -7.4  -2.52946   TTCCTTCATAAAATT          TGACGGGCAA GAGC TTACCCGTCC           CCCCCGCCAGCGTCA  55 162
 C1O54_11095 NONE
        pheT NONE
 C1O54_11085 2521783 .. 2521821 - -18.9  -5.65496   CATGAAAAATAAAAA   GCAGGCCGCGCGTTCCA GCTCA TGAAACGCGCGGCCCGT   TAACGGAAGTTACCT 100 35
 C1O54_11080 2520401 .. 2520452 -  -2.1  -4.41348   GGCGTGGGAAACAAA CACGACCGTTTCCACCATGCGCT GCCACA AGCTGGTGGCGGAACCGCTCGTC CGCATCTTCCAGGCT  63 321
 C1O54_11070 2518488 .. 2518517 - -20.9  -3.17075   GCCGCTTCAACGCAA       CAAGGGCTGAACC ATCC GGTTCAGCCCTTG        TTGGATAAGGATGCG 100 56
 C1O54_11050 NONE
 C1O54_11045 2514062 .. 2514077 -  -5.4   -2.6296   GAAATGCCAATGAAG              GCCCAT GGCT ATGGAC               GAGAATGCCTTATTT  47 18
        proC 2513129 .. 2513178 -    -5  -4.55295   TCCGGTACAAATAAA GGCTCTCCACCAGGCCGTCCTTTC CGGA GAAAGC-CGGCTCCG-GGAAAGCC AGAAGAAGCATCCGT  71 40
 C1O54_11010 NONE
 C1O54_11005 2501430 .. 2501454 - -15.8  -5.00616   TCCGCCCGCAAAAAA          GAGGCCGGAT TTTTC ATCCGGCCTC          TCGCAACAGGTATTT 100 64
 C1O54_11000 2500370 .. 2500398 - -16.1  -5.60864   GAGACATTAAAAAAA        TCGCCTGCAAGGC TGG ACCTTGCAGGCAA        AAACGCCTTTAACTG 100 58
 C1O54_10995 2499272 .. 2499306 -  -2.9  -3.72576   CGGCTTTCTATCAAA     GCGGAAGCATTTT CAAAAGGAC AAAATGCGTCAGC     CACAGAGAGGGAAAT  52 61
 C1O54_10990 2498122 .. 2498137 -  -2.6  -2.57132   TGTTGTGCGTATAAG              CTCATGA TGG TCATG-G              ATTGGAAAAAGAATT  39 39
         pgi 2496536 .. 2496564 -   -19  -5.45802   CCCGGAAAAGAAAAA        CGGCCGCTTATC AACCG GATAAGCGGCCG        CCGGAAATAATATGC 100 49
 C1O54_10975 2493420 .. 2493445 - -19.1  -4.58395   TCCATCCGCTAAAAA         GCCCGTGGTTC CGAA GAACCACGGGC          TGTCTATTAACCCTT 100 52
 C1O54_10955 2490162 .. 2490188 - -11.6  -3.53012   CGGCCCTGCCGGAAA         TTCCCGCCGGAA AGG TTCCGGAAGGAA         CGATGCTCAACGGCG  79 72
 C1O54_10945 2484606 .. 2484618 -  -4.8  -2.78679   TTCCGCCACTGAAAT                GGGA TTTTT TCCC                CTGTTCCGTCTGAAT  45 92
 C1O54_10935 2483127 .. 2483146 -  -4.2  -4.52857   AGCGTTCACATAAAA            TCCATGCC TCCT GGAACGGA             ATTCTCCGGGGGAAA  68 149
 C1O54_10910 2475741 .. 2475774 -  -4.6  -3.23274   TCTTTCATAACCCAA     TTTCCGCTGTATTT ATGGGA AAACACGGCGGAAG      ACAATACCCGCGATA  50 88
 C1O54_10905 2474708 .. 2474721 -  -6.7  -2.72344   TGGCACGGTTAAGGA               GCCTT ATGA AAGGC                TCTCCTGCCATGAAG  53 45
 C1O54_10900 NONE
 C1O54_10895 2472071 .. 2472082 -  -5.8   -4.1711   ATGATTTCTAACAAA                GGTG GCAT CACC                 TCAGCATCCTCACTC  66 406
 C1O54_10865 2464277 .. 2464294 -  -4.1  -4.47888   GGAAGGTAAAAACAA             TCAGACA TTAA TGTCTGC              GGCGCCTTGCCAGAA  66 15
 C1O54_10860 2462918 .. 2462932 -  -7.1  -2.71924   CAGCCCTTCTGAAAG               TCCCG GCAAG CGGGA               AGTACCGCCTTTACC  53 471
 C1O54_10845 2462010 .. 2462038 - -17.6  -4.54727   TCCGGCAAAGGAAAA        GGCCTTAAAGCG TTAAC CGCTTTAAGGCC        TTTATTTGGTGGAGC 100 32
 C1O54_10830 NONE
 C1O54_10825 NONE
 C1O54_10820 NONE
 C1O54_10815 2456617 .. 2456633 -  -4.3  -4.15854   AAACTTACCGGAAAA              CCCACGA TTT CCGTCGG              CTCCGTGGGGCTTAA  61 396
 C1O54_10800 NONE
 C1O54_10795 2452917 .. 2452937 -  -7.5  -2.78816   GCATGCTGTACTACA            CGGACGTGT ACA ACAAGCCCG            TTCAGGAATACTGGC  54 436
        pepT 2444102 .. 2444120 -    -3  -3.62597   CTTATTCCCGAATAA             CGGAATCG CAA CACCTCCG             CTTACCGCCATGTTC  49 43
 C1O54_10760 2442383 .. 2442414 - -14.4  -5.26316   GGACGGCATAAAAAA      TACAGACGCCGTCC GAAA GGGCGGCGTCTGGA       AAAAACGCGTGCGCC 100 71
 C1O54_10755 NONE
 C1O54_10750 2440642 .. 2440657 -  -5.4  -4.12947   AAATGAATTAAAGAA              TCAGAG CGTC CCCTGA               CTGGAATTCCGGAAC  66 2
 C1O54_10740 NONE
 C1O54_10735 2436223 .. 2436248 - -11.1  -5.30575   GAAAAAGTGAAAAAA         GGCCGGAGTCC ATAG AGAATCCGGCC          TTTTGGAAAGGATAG 100 67
 C1O54_10730 2435274 .. 2435287 -  -2.3  -5.06816   ACTTTGCAACAAAAA               GTCCC CCTT GTGAC                CGCATGCCGGAACAT  74 99
 C1O54_10725 2434003 .. 2434014 -  -4.4  -2.90615   ATGCGGGTTAAATTA                CTTC ACAA GAAG                 TTCCTGAACCTTGTC  47 11
 C1O54_10720 NONE
 C1O54_10715 NONE
 C1O54_10710 NONE
 C1O54_10705 NONE
 C1O54_10700 NONE
 C1O54_10695 2427359 .. 2427415 -  -4.2  -4.86621   ATCCTGAATGAAAAA GGGCCGCACGCCTCTGCCGCTCCAGCC GGGA AACGGAAGCAT-AGGGTCGTGCGGCCT GCTTCGTGATGAATA  74 53
 C1O54_10690 NONE
 C1O54_10685 2424677 .. 2424691 -  -2.8  -3.92075   ACCTGCATTGATAAA               TGATGA AAT TCATCT               GCCATATTGCAGTGC  54 139
 C1O54_10680 NONE
 C1O54_10675 2423316 .. 2423327 -  -7.2  -5.00884   ATTCCGGTGAAAAAA                GCGG GAGA CCGC                 TGGATTGCCGACCCA  86 149
         lnt 2418239 .. 2418259 -  -6.7  -4.78764   GAAACGCATGAAAAA            GCTTCCGGC CAT GCAGGCAGC            CATCCAGGGAGGGCC  79 311
 C1O54_10640 NONE
 C1O54_10635 2414997 .. 2415017 -  -6.7  -4.08767   CCTATCCTCTGAAAA            CGCTGGTGG ACC CAACCGGCG            CGGGGGATACGTTTC  68 267
        crcB 2413402 .. 2413415 -  -5.3  -4.58663   AGCATCCTGGAAAAA               TCCTA TTCC TAGGA                ACAAGCCGTCGAGGA  71 262
 C1O54_10585 2404100 .. 2404140 - -10.4  -5.52986   AGCTGATCAAAAAAA  CCGCAGAGCCGCTTTCCC GATTA GGGAAAGCGGCTCTTTTA  GCAATTGAAAGAAAA 100 91
 C1O54_10570 2401225 .. 2401266 -  -2.5  -3.90318   GCAGGATTCCAGAAA CATGGC-TGCACATATTGTT GTG AACAATATGTAAATACAATG TGAATAAGAAATAAA  53 80
 C1O54_10565 NONE
 C1O54_10560 2400097 .. 2400131 -   -10  -4.72272   TTTTTTTAGGAAAAA     GCGCTTCCTCCAGG CGTTCGT CCCGGAAGAAGTGC     TCTTTTGAAGATAAG 100 64
        aroA 2393609 .. 2393623 -   -10  -3.05596   GATGTGTGCATTGAA               GCGGAT GAA ATCCGC               GAGATTTCCCGTTTC  66 360
 C1O54_10515 2391687 .. 2391723 - -13.2  -2.85446   GACAAAGCCATGACA   CAGGGCCGTTTTGCATC CCCG GA-ACAAAACAGCCCTG    CGATGAATAGCGTTT  79 50
 C1O54_10500 2388044 .. 2388066 - -17.8  -4.00532   TTCGTAAACAGGAAA           CGCTCCGGAA ATC TTCCGGAGCG           TTTGAAGAGAAAGCT 100 55
 C1O54_10495 2385437 .. 2385455 -    -3  -2.54523   GTATATGGTAATGGA             TGTTCAGG TCC CCTGGACG             GGGGCTCCGCCGGGG  40 10
 C1O54_10490 NONE
        queC 2384114 .. 2384131 -  -8.3  -3.12351   GCTTTTGAGACGGAA             GCGGGCC TGGC GGCCTGC              CGCAGCGTGTTTGCA  60 218
 C1O54_10470 NONE
 C1O54_10465 NONE
 C1O54_10460 2379395 .. 2379425 - -15.5  -5.38047   CATGGAGACAAAAAA      CTGCCCTCCGCACC GTGT GGCG-GGAGGGCAG       TCCGGATGGAAAAAG 100 56
 C1O54_10450 2377336 .. 2377361 -  -6.8  -4.20918   TGTAATCGGAACAAA         TGCCAGTGCC GCCAAT GGCACGGACA          ATGTTGTGATAGGTT  71 490
 C1O54_10415 2369749 .. 2369763 -  -5.6  -3.06831   GGAACTGTCATGGAA               GGCGGA AAC TGCGCC               TGACCGTATCCCTCT  51 3
 C1O54_10405 2365771 .. 2365790 -  -2.2  -3.41134   AGAGTTATTAAGTAA            GGTAAAAA GGCG TTTTTAGC             GGTTCAGCACATGTT  46 21
 C1O54_10400 2364042 .. 2364068 -  -3.8  -2.51815   CCGAAGGAGGAAGAG        TCCG-TCACCT GGCTTA AAGTGAACGGA         GAGGACAAGGAGCTT  41 505
 C1O54_10375 2360737 .. 2360764 - -12.6  -4.70266   AAGATGATGTAAAAA        GGCCGCCTGACC CGGA GGAAAGGCGGCC         TGTAAAAGGAAAGGG 100 53
 C1O54_10370 2359316 .. 2359327 -  -2.2  -2.62398   AAAAATCAGACGAAG                CTGGC AAA GCC-G                ATGTCCGGCCGGCGC  39 4
 C1O54_10365 NONE
 C1O54_10360 NONE
 C1O54_10355 NONE
 C1O54_10350 2354920 .. 2354930 -  -2.4  -3.91911   GGTATTGTAAGCAAA                 GAGC ATA GCAC                 TTTGGGGAGGTTTTG  53 124
 C1O54_10345 NONE
 C1O54_10340 NONE
 C1O54_10335 NONE
 C1O54_10330 NONE
 C1O54_10325 NONE
 C1O54_10320 2346490 .. 2346530 -  -7.6  -3.27525   TGGGGCCAAATGTAA GCTGGG-A-GGAGTTGACGC GCC GCGCCAATACCATTCCCAGC AACGTACTGACCAGC  59 210
 C1O54_10310 2345154 .. 2345180 - -16.7  -4.74103   TTCTGAATGTAAAAA         CACCCCGGAAT ATTGA ATTCCGGGGTG         TTTAGGAAAATGGTA 100 36
 C1O54_10305 NONE
 C1O54_10300 2342394 .. 2342407 -  -3.8  -4.77438   ACGCAGGAGGAAAAA               TCCG CCGTGC CGGA                AGCCGTCAGGGAGCG  72 208
 C1O54_10260 2333983 .. 2333996 -  -2.4  -4.25458   AAGTTTATGAAGAAA               GCAT GAAGGA ATGC                ATGGAGCGGAAAACA  57 118
 C1O54_10250 2332935 .. 2332965 - -13.3  -3.22491   AAACTGTACCAGGAA      CCGGCTC-CCCACC CTTT GGCGGGAAAGCCGG       CGGTGTGTTCTTAAC  83 61
 C1O54_10235 NONE
 C1O54_10230 2325930 .. 2325940 -  -5.4  -4.07568   GCGGGTTTTGGAAAA                 GAAG TCC CTTC                 TGCGGCTACCGTAGA  63 241
 C1O54_10225 NONE
 C1O54_10220 2323428 .. 2323457 - -17.9  -4.58395   CGGATCCGTTAAAAA       CGGGGCGGCTGAA CTGC TCCAGCCACCCCG        TTGAAAAAGGGAGTT 100 39
 C1O54_10215 2322794 .. 2322810 -  -5.1  -4.26461   AGCAATTGAAAATAA              CAGACGC CGG ACATCTG              ATAGAAGACAAGGAG  66 63
 C1O54_10205 2318206 .. 2318216 -  -2.4   -4.8269   CAGAACTATCAAAAA                 GCGG TTG CCGA                 ACGCATGGAAAAAGC  69 467
 C1O54_10185 2314811 .. 2314851 -  -3.9  -3.01712   CCTTGTTCGTGAACA  CCAGTTTGAAGTCAGGGAA CGT CTCTCTTGCGTCAAACCGG  GTCTTTTCCATCACC  45 142
 C1O54_10165 2309735 .. 2309765 - -20.4  -5.04249   CCCTGAAAAAAGAAA       GTCGCCCCGACCGT AAA ACGGCCGGGGCGCC       CCAACTACCCTATGA 100 239
 C1O54_10160 2309116 .. 2309128 -  -4.7  -3.23708   TTGCTTTAAAAAGCA                GCTCG GTG CGCGC                GTCCTGCTTCATGAA  49 261
 C1O54_10140 2303350 .. 2303380 - -20.6  -4.49311   ATCATCATTACAAAA       GAAGCCGCGCTTTC GGC AAAAGCGCGGCTTC       TGATTGCATGCAAAG 100 193
 C1O54_10120 2298847 .. 2298857 -  -6.8  -4.57073   TATGTCCTGCAAAAA                 TGCC AGC GGCA                 AAACGGTAGGCGGGA  76 153
 C1O54_10115 2297114 .. 2297162 - -11.7  -3.48807   TGATTAAAGTCAGAA CAGCCTGAACCTCATTCCGGA AAAACAG TCCGGAATGGAGAACAGGCCG TTTCTTCAATTTGCG  80 54
 C1O54_10105 2295885 .. 2295931 - -15.8  -4.00323   GGAAACAGATAAGAA CGCAGAGCGGCCGGGATTCCTC ATT GGGAAATCCCGGCCGCTTTCTG TTGCGGATTTAAGGC 100 46
 C1O54_10035 2284031 .. 2284043 -  -4.7  -3.09987   GGAAGATGCAGGCAA                CCGGG AAA CCCGT                CAGGATGGAACGAAT  48 43
 C1O54_10030 2282186 .. 2282201 -  -5.4   -2.6176   AATTTCATTGATAAG              CCGCAT TTTG ATGCAG               TTCGGCAGAGCGGGG  47 425
 C1O54_10020 NONE
 C1O54_10015 2279977 .. 2279995 -  -5.8  -4.93296   GCAGTACTATAAAAA             GGTGGTGG GAG CCCCCTCC             ATGGTCTTTCTTCCG  82 236
 C1O54_09990 NONE
 C1O54_09985 NONE
 C1O54_09980 NONE
 C1O54_09975 NONE
 C1O54_09970 NONE
 C1O54_09965 2271527 .. 2271548 - -12.9  -2.70298   GGCCTGAAGGATAAG           GGCGGGCGC GGAA GCGTCCGCC            TCCTGCCGTCACGGC  76 34
 C1O54_09960 NONE
 C1O54_09955 NONE
 C1O54_09950 NONE
 C1O54_09945 NONE
 C1O54_09940 2264125 .. 2264162 - -13.5  -4.41348   TGCGGCTGAAAGAAA   GCCGCCCTTCCGGGAATA CGG CATTC-CGGAGAGGCGGC   TCCAGAGGAGGCGGG 100 52
 C1O54_09880 NONE
 C1O54_09875 2246375 .. 2246391 -  -3.6  -3.36823   GCGGCGAAAACGGAA              CTCCGG AAAAA CAGGAG              GGAAGGGGAGCTTTT  50 39
 C1O54_09870 NONE
 C1O54_09865 2245027 .. 2245039 -  -3.3   -4.4078   TCTGTCCAACTAAAA                TCACG AAG CGGGA                GCGTACGAGCGGCCG  61 13
 C1O54_09860 2243240 .. 2243255 -  -4.6  -3.29511   GTGATTGCGCCAGAA              GGGGAG TGAC CTCTCC               AGAGAAAGGGAAAGA  50 43
        hprK 2239286 .. 2239300 -  -4.2  -3.31501   AGTAAGGGGTGATAA               CGGTTG CTA CAACGG               TAAGTACACTAATTA  50 71
 C1O54_09835 NONE
        ptsP NONE
 C1O54_09825 2235274 .. 2235331 -  -9.3  -2.79212   AAGGGAATAAAAACG GGAAAGCCGCACCATACTCCCTGTTTTC TTA AAAGAAAAGG-GAATAATGCGGCTTTCC AGGGAGGGATGGAGA  62 46
        argF NONE
 C1O54_09815 2233883 .. 2233895 -  -3.3  -3.93166   TTTGGAAAAAATCAA                TGGTG TTC CGCCA                TTTTTATGGCGGCCT  54 9
 C1O54_09810 2233313 .. 2233327 -  -3.4  -4.07568   CCCTGGTCCTGAAAA               GGGCAG GTT CCGCCG               TCATGGCCCGCCGCC  58 182
 C1O54_09795 NONE
 C1O54_09790 2226619 .. 2226632 -  -6.7  -2.53876   CTTTATTCCAATGCA               GTAGC CACC GCTAC                GGCAGCCATAGGAGC  50 330
 C1O54_09765 2221814 .. 2221832 -  -3.1  -2.51312   AACGTACTCATTAAC             GGCTTTT GTACA AAATGCC             CGGAGGCGGCTCAAG  40 100
 C1O54_09760 NONE
 C1O54_09755 NONE
 C1O54_09750 NONE
 C1O54_09735 NONE
 C1O54_09730 2215904 .. 2215921 -  -9.1  -2.96274   TTTTCTATAATGATA             CCAGGGA ATTT TCCCCGG              AGGCGCTGGAGGAAT  63 419
 C1O54_09705 NONE
 C1O54_09700 NONE
 C1O54_09695 2209848 .. 2209861 -  -3.7  -2.55061   ACAATGCCATAACAG               GCCGG CTTC CCGGG                GGCATCCTCAGTTAT  42 33
 C1O54_09690 NONE
 C1O54_09685 2207279 .. 2207317 -    -6  -2.91681   GTTCAATGTCACATA  TCCGTCACGGGAAGGCA AGCGCA TAGCATCCCG-GACGGA   ATATTACAGGAATGT  52 131
 C1O54_09680 2206116 .. 2206128 -  -3.3  -4.67353   TGAGCCAGTCAAAAA                CGGGT AAT ATCCG                GCTGTTTGGCATGCC  66 147
 C1O54_09675 2205018 .. 2205034 -  -5.7  -4.14927   AGAAAGAAAACACAA              GGAGGGG GGG CCACCCC              CGAAAGGCCTTCCTC  68 312
 C1O54_09655 2191844 .. 2191854 -  -5.4  -3.85088   AAAAGGATAAAAAAT                 TGCT TAG AGCA                 TTTTAGCAACTTAAA  61 36
 C1O54_09650 NONE
        xseA 2187801 .. 2187813 -  -4.8  -2.90901   ATACTCTCAAGCAGA                GCTG AAAAA CAGC                TTCCGCGGAACCTTC  47 507
 C1O54_09635 2187365 .. 2187381 -  -3.6   -4.8622   TGCCTCAAGCAAAAA              CGAACC ACAGA GGCCCG              CAGGGTGCTGGGGAA  76 115
 C1O54_09610 NONE
 C1O54_09605 2179099 .. 2179122 - -13.9   -5.9873   TTATCATAAAAAAAA          GCGCCTTCC GGCAAG GGAAGGCGC           TGGATATGAAAAGGT 100 54
 C1O54_09585 2174730 .. 2174753 -  -8.2  -5.43414   AGTAGAGACAAAAAA          TCCCGCCGTGA TGT TCA-GGCAGGA          ATCATTTTATTTGCT 100 55
        ssrA 2174295 .. 2174336 - -12.5  -4.82901   GCGGTTCTATAAAAA CAACAACCGCAAGCCTT GTTTTTCA AAGACTTGCGGTTGTTT  TGAAATGGTGGAGGC 100 31
 C1O54_09555 2169019 .. 2169047 - -18.3  -4.77173   CTTCTACAAAACAAA        GTCCGCAGGATCA AGA TAATCCTGCGGAC        TGTATGACGGGAAGG 100 57
 C1O54_09550 2168246 .. 2168264 -  -7.4  -4.76802   CTGAAAAATAAGAAA             GACGGC GTTGCTT GCCGTC             CCAGCTGCCGCCATA  85 228
 C1O54_09545 2166600 .. 2166617 -    -7  -2.65994   GGAAAGAAAAAGGAC             TTCCCC GCAACA GGGGAA              CGGTTTCTCCGGGAG  52 64
        trpB 2165214 .. 2165249 -   -17  -2.71011   AGCCTTGCGTAAGGA    TGGCGTATGAAGGATG ACGG CACCCTTCATACGCCG     AAAATGAGGAAAGGC  95 48
 C1O54_09535 2164238 .. 2164250 -  -6.3  -3.23708   GGCTGGGAAAAATCA                TGCTA GCA TAGCA                GCCAGCGGTTCTGCA  55 10
 C1O54_09530 NONE
 C1O54_09525 NONE
 C1O54_09520 NONE
 C1O54_09515 2160267 .. 2160281 -  -2.8  -3.04515   AAAGAGGGGTGAAGA               TTAGTC TTT GACAAA               AGGAACCTGGAGTTT  44 11
        cydB NONE
        sucA NONE
        sucB 2154950 .. 2154960 -  -2.6  -3.93262   GCGCAACAGACGAAA                 TTTT TTG AAAA                 TACAGCGGTTTTAGA  53 336
 C1O54_09495 2154012 .. 2154023 -  -7.2  -4.30014   GGGAGTAAGCCAAAA                CGGC TCAT GCCG                 CATTGAAGTACGGAA  76 189
 C1O54_09480 2150020 .. 2150045 - -16.2  -5.03314   TCCATGCGCAAAAAA         GCGGCTCCGT AGTGTA ACGGAGCCGC          CGGAAGACAGTAATA 100 58
 C1O54_09460 NONE
 C1O54_09455 NONE
        cobD NONE
        cobT 2137624 .. 2137639 -  -3.2  -4.59773   CGCCAGGTTGAAAAA              CAG-GGC CGT GCCGCCG              AAGGTCCCCAGGCGG  66 373
 C1O54_09435 NONE
 C1O54_09430 2135829 .. 2135843 -  -6.4  -3.13403   TTTTCCTGACTAACA               GGAGAA CCG CTCTCC               GGGCGTTTCAGCCTT  53 33
 C1O54_09425 NONE
 C1O54_09420 2135291 .. 2135315 - -11.4  -4.66938   ACTGGTAATAGAAAA          CCCTGGGAGC GTTTA GCTACCAGGG          TTTATTGATTGGTAC 100 35
 C1O54_09405 2133177 .. 2133191 -  -4.3  -3.53563   ATACGTTTCCGGAAA               GAAGA TTCAG TCTTC               TGGAGGAATTCTTCT  54 112
 C1O54_09395 2130715 .. 2130741 - -12.2  -3.06815   ATCCTTTTCAAGAGA         CCGGGCGGGG AGAAGAG CCCCGGCCGG         ATTTTACCTGCAAGA  74 100
 C1O54_09380 2129211 .. 2129235 -  -8.5  -5.14563   CGGGGTATGAAAAAA          TTCTGGATGCC CTG GGCATCCGGCA          CGGGGAAAAGGAATA  93 107
 C1O54_09370 2125681 .. 2125691 -  -6.8   -4.0492   GAATCCGGAGAGAAA                 GCCA ATT TGGC                 TGTATTGAGGCCCTG  68 390
 C1O54_09350 2119121 .. 2119140 -  -7.8   -3.7282   GGAGTTGATCAACAA            GTTCCGCA CGTT TGCGGAGC             AAGCCGTAGCCGAGG  67 194
 C1O54_09335 2115040 .. 2115066 - -16.6  -4.87665   CGGGAGGGATAAAAA         CGCCCCGACG GATATGG CGTCGGGGCG         TGACAGAGGTTAAAT 100 66
 C1O54_09325 NONE
         rpe 2109614 .. 2109635 -  -7.2  -2.66435   AGCCTGATGACAGGA           TGCCGGAG ATGGAA CTCCGGCG            TTTTAGGGCGGATGT  55 75
        rpsT 2103618 .. 2103646 - -15.3  -5.20781   GAGTAGAAAATAAAA        CAAGCCGCTCAGC AGA ACAGAGCGGCTTG        CCATAAAGAATCGTC 100 60
 C1O54_09290 2103321 .. 2103340 -  -9.2  -3.01712   GTTTTTTCCGTAACA            CGGCGCAG TTGC CTGGGCCG             CGGAAGAAAGCATAG  63 64
 C1O54_09280 2100915 .. 2100926 -    -3  -3.61764   TCATGAACGTTGAAA                TTCA TACC TGAA                 TTCCGGGAGGGAGAC  49 15
 C1O54_09275 NONE
 C1O54_09270 2098805 .. 2098829 - -17.2  -3.28712   TCTTCCTGTTCACAA          GCCGTACCGG TTTTT CCGGTACGGC          TTGTTTACGGTTTCA  91 124
 C1O54_09200 2080670 .. 2080682 -  -4.8   -4.4009   GTCTATCTTATAAAA                CGTC CACAT GACG                CTATTTTGCTCTCCT  66 215
 C1O54_09195 2078301 .. 2078326 -  -8.2  -4.61482   CCTCGGAAAAAAGAA         CCCCGGTTCCC TGAAT GGGG-CCGGGG         CGGCAAGGAGGTTCG  86 55
        rpiB 2076438 .. 2076466 - -17.5   -4.2558   GACTTTTGATGAAAA        GGCCGTTCCGC GGTAAAG GCGGAACGGCC        TGAAAAGCGTTTATA 100 52
 C1O54_09160 NONE
        rimO 2067255 .. 2067267 -  -3.3  -3.21934   GCCTTTGCAGAAAAT                CCGGA AAG TCGGG                CGGAAAACAGGAGGC  46 111
 C1O54_09145 2064318 .. 2064344 -   -13  -5.38047   CACGGATAGAAAAAA         GGGCACGTTTTC GAA GGAAACGCGCCC         TTTTTTGATACTGCG 100 70
 C1O54_09135 2059718 .. 2059734 -  -8.7  -2.70298   GCCCGTAAGGAGAAT              CACATGC CGG GCATGCG              GGCTGGTTTTTCCTG  59 181
 C1O54_09115 2055779 .. 2055789 -  -2.4  -4.65895   GCTGGTAGTGAAAAA                 GCCC TGA GGGA                 AAATGGCTATTTGAC  65 32
 C1O54_09105 NONE
 C1O54_09100 NONE
 C1O54_09095 NONE
 C1O54_09090 NONE
 C1O54_09085 NONE
 C1O54_09080 NONE
 C1O54_09075 NONE
 C1O54_09070 NONE
 C1O54_09065 NONE
 C1O54_09060 NONE
 C1O54_09055 2042635 .. 2042646 -  -5.8  -4.95806   AAATCAGGAGAAAAA                CTGG AGCA CCAG                 CGTGGGGAAGAAGCC  81 2
 C1O54_09050 2041023 .. 2041034 -  -7.2   -3.6106   CTCAAGATTCTGAAA                CGGC TGAA GCCG                 TAAGTCCGGAAGGCC  64 181
 C1O54_09045 2039489 .. 2039503 -  -6.4  -4.58283   GAAGCCCTGGAAAAA               TCCCTG TGG CAGGAA               TGCGCCAGATACGGC  75 470
 C1O54_09030 NONE
 C1O54_09025 2034639 .. 2034652 -  -3.7  -4.83169   AGCTCTGGAGAAAAA               CGAGG CGGC CCGCG                AAATTCTGTGGCTAC  72 298
 C1O54_09015 NONE
 C1O54_09010 NONE
 C1O54_09005 2030717 .. 2030729 -  -6.2   -3.1855   TTCCGGAACATTTAA                CGCC TATTC GGCG                GATCTGTCCATGACG  55 74
 C1O54_09000 2029165 .. 2029180 -  -3.2  -4.13561   GTTGTTCAAAAAACA              GGAACC TCGG GGTTCT               ATTTTTCTTCTTGTA  58 64
 C1O54_08990 2028294 .. 2028321 - -10.5  -5.10077   AAATACGTTAAAAAA        CGGCGCGGACT ACAGAA AGCCCGTGCCG         TTTGGGGATAGGAAA 100 62
 C1O54_08985 NONE
        mviN 2025525 .. 2025536 -  -5.8  -3.05384   CCTCCCTCTATGGAA                GGGA TTTT TCCC                 GTCAGCATTTCAGGA  53 27
 C1O54_08975 2024155 .. 2024179 - -11.4  -4.86621   ATCCGGAAGTAAAAA          GGCGTTCCGC TTGAC GTGGAACGCC          TTTTTATGGTGATCA 100 48
 C1O54_08970 2023487 .. 2023511 - -12.2   -5.4505   TTCGGGAAGAAAAAA          CGGCTTCACC TTTTG AGTGAAGCCG          TTTGGCAAAAGCTGA 100 50
 C1O54_08965 2022242 .. 2022258 -  -3.6  -2.75294   CCAAACCTGCGAAAT              CTCCCG GAAAG CGGGAT              TTTTCCTGTTCTCAG  44 37
 C1O54_08960 NONE
 C1O54_08955 NONE
 C1O54_08950 NONE
 C1O54_08945 2016635 .. 2016663 - -17.5  -3.91897   CCCTCCATGCACAAA        GCCTTCCTCCACT GGA AGGGGAGGAAGGC        TGCCGGAAAAGAAGC 100 66
 C1O54_08940 NONE
 C1O54_08935 2014683 .. 2014712 - -13.5  -2.54193   CATCAGGTTAATTGA       GGGCCGCAGCTGT AATA ACGGCTGTGGCCC        TTGCCGTAGCGAGGC  77 108
 C1O54_08920 2012615 .. 2012631 -  -2.2   -3.6328   GAGAGATATAAAAAC              GGTTCC TGTCC GGAATC              AAGCTTATATTACGG  47 35
 C1O54_08915 2012256 .. 2012280 - -11.3  -4.37527   GGAGAAGGATGAAAA          GGCCCCGGGCT GGG AGAACGGGGCC          TGGCTGGATAGAGAG  91 90
 C1O54_08910 2011742 .. 2011769 -  -7.6  -2.76696   GCTTCCGGGAAGAAG        CGGACGGCAACC GCAT GGTTGCCGCTTG         ACTTACCGGCGGTTG  56 28
 C1O54_08895 2010033 .. 2010057 - -14.3  -3.84246   GTTTTAATCAGGAAA          GGCGCCGGA TATTACT TCCGGCGCC          TTTTCTGTAAGTGTC  93 445
 C1O54_08880 2007107 .. 2007117 -  -2.4   -3.2614   TATTTTTTACAGGAA                 CAGC CCG GCAG                 CCAGCATGGCGAGGT  44 6
 C1O54_08875 NONE
 C1O54_08870 2005693 .. 2005703 -  -5.4  -3.15544   CGTCATCGGCAGCAA                 TCAG AAA CTGA                 CAGGTTATGGCGGGG  50 254
 C1O54_08855 NONE
 C1O54_08850 1996309 .. 1996332 -  -2.6  -2.71483   ATATTTTTGTAATTA          TATAAAATTA TTGT TATTTTTATA           AGAATGTGAGGTATC  39 330
 C1O54_08845 NONE
 C1O54_08840 NONE
 C1O54_08835 NONE
 C1O54_08830 1988091 .. 1988102 -  -5.8  -3.80569   GAAAATACAGGGAAA                CGGA TTTG TCCG                 GAAAGAAAGGCTTAT  62 37
 C1O54_08795 1979199 .. 1979215 -  -6.5  -3.14132   TGGCGCGTCTACCAA              TTTCGCC ACA GGCGCAA              CGAATGGGCGGACGC  56 305
 C1O54_08790 1979078 .. 1979120 -  -9.4  -4.87892   CTCGAAGAAAACAAA TAATCCGAACCCA-TCTCC GATTAA GAAGATTTGGTTCGGATTA TATTGGTTTGGTGCG  91 34
 C1O54_08785 1978665 .. 1978687 - -10.6  -4.16681   AACAGCATGGCAAAA           GGGGATGG TCGACCG CCATCCCC           TTTTGTGCGTTTATT  88 40
 C1O54_08775 NONE
 C1O54_08770 NONE
 C1O54_08765 NONE
 C1O54_08760 1974424 .. 1974434 -  -8.2  -4.10453   GAAAGCGTGGTAAAA                 CCCG GTC CGGG                 GCTGGTGCAGATGGG  73 439
 C1O54_08740 1969293 .. 1969303 -  -5.4   -4.8622   CTGGTCAATGAAAAA                 TCCA ATG TGGA                 TTACCGGAACGCTGG  80 469
        pflA 1962880 .. 1962905 - -10.3  -3.38812   GGCTCTGGAAGAAGA         CCGGGAGCGCG CCGC CGCGCTGGCGG          AACATTTGAATGTGG  72 443
 C1O54_08705 1960793 .. 1960817 - -13.5  -5.52384   TGGTCAGCAAAAAAA          GACCGGCACCC GGC GGGCGGCGGTC          TTCTTGAAATCTGTG 100 53
 C1O54_08700 NONE
 C1O54_08695 1958891 .. 1958916 - -20.5   -3.6715   TCAGCCAATTGGAAA         GCCGCTGCGGA ATCA TCCGCAGCGGC          TTTTTTCATGAATGG 100 95
 C1O54_08615 1932687 .. 1932699 -  -4.7  -4.62302   CAATACGCTGAAAAA                GCGCC TCG GCCGC                AAGCCTCCCATGGGT  71 124
 C1O54_08605 1930890 .. 1930904 -  -7.2  -3.81954   GGCAAAATAAAGGAA               TCCTTT CTG AAAGGA               GGTCTGGCCGGAGGG  69 81
 C1O54_08600 1929074 .. 1929101 -  -2.6  -4.14243   TACGGCAGGTGAAAA        CCGCCGGTCCGCA TTC TGCGGAAAAG-GG        AGTGCATGGGGGCTT  57 116
 C1O54_08570 NONE
 C1O54_08565 NONE
 C1O54_08560 1919454 .. 1919479 - -15.4  -3.57883   ATAAGAGGGGGTAAA         CCGCCGGCCC GTTGGG GAGCCGGCGG          TTTTTTGTTAGCGTG  91 435
 C1O54_08540 1915437 .. 1915464 -  -5.5  -2.74756   AAACCACGGGAATCA        CCCATGCGGGA AAGGCG TCAGGCATGGG         AGGGGGGGGAATAGG  48 15
 C1O54_08535 1914304 .. 1914326 - -10.5  -2.62442   AGGGAATACAGCAAT           CGGGCGGGA GCGCG TGCCGCCCG           TGTCATAGCGGAAAA  68 45
 C1O54_08530 1912856 .. 1912881 - -18.3  -4.77165   TCCGGCATAAGAAAA         CCCCGCCTGCC GTTA GGCAGACGGGG          CCGTATCTCTGGTTT 100 67
 C1O54_08505 1907264 .. 1907290 - -11.6  -4.49337   CTACAAGGCAGAAAA         GCGCACCACG GCAGAAT CGTGATGCGC         TGTATAAGGAATGAA  95 60
 C1O54_08500 1906111 .. 1906134 - -19.6  -4.67641   ATCTCAAAAGCAAAA          CCCCGGACCG CAGG CGGTCCGGGG           CGGCTCCCTTTTTCC 100 70
 C1O54_08490 NONE
        menA 1903131 .. 1903144 -  -6.7  -3.22298   CGGATTCATGATGAA               CGTAG TTAA CTACG                CTGGCGGGGTTAAGC  58 46
 C1O54_08480 NONE
 C1O54_08475 1902094 .. 1902118 -  -3.5  -3.73224   TGAGCCTTCAGGAAA         TGCGTGCCGC CGGGAT GCGGC-CGGA          AGACGTGTTCCGACT  55 113
 C1O54_08465 NONE
 C1O54_08460 1898583 .. 1898600 -  -6.2  -4.15833   AGGAGGAGCTTAAAA             GCCGCC TTTGCG GACGGC              AGACGGATGGCGCTG  66 326
 C1O54_08440 1895149 .. 1895161 -  -6.2  -3.44527   CACTGATGACGATAA                GGGC GAACA GCCC                CAGGCAGAGGTTCCA  57 295
 C1O54_08435 1893316 .. 1893331 -  -3.2  -3.54424   TGTGATCGGCGGAAA              GGTCCA TGCG TGCACC               TGCCGGGCAGGGATG  49 67
 C1O54_08430 NONE
 C1O54_08425 1890851 .. 1890872 -  -7.2  -3.73042   TGCTGGATGAAAAGA           CCCAGGGG GAAGTT CGCCTGGG            TGGCATCGGCAAGGT  67 407
 C1O54_08410 1888388 .. 1888403 -  -7.5  -3.24598   AAGAAATTATCAAGA              CCGCC TGCGTG GGCGG               GCAAACGCCGTTAAC  61 122
 C1O54_08405 NONE
        pdxA 1887083 .. 1887099 -  -7.3  -3.77722   TGGAATCAGGAAGAA              GGAGAAA GGG CTTCTCC              CTGATGGGAGTGATA  67 116
        rpsF 1886340 .. 1886365 -    -9  -5.66684   TAATCTATAAAAAAA         GAACCGCCCC TTCACG GAGACGGTTC          TTTTTGATAAGAAAG 100 76
 C1O54_08360 NONE
 C1O54_08355 1879656 .. 1879681 -    -4  -3.61398   CCGCCTGGGGAAGAA         GCATGCAGCCT TTTTC AAGCCGC-TGC         CTCCTGGCTGGAAAG  52 72
 C1O54_08345 NONE
 C1O54_08340 1876953 .. 1876969 -  -2.2  -2.79098   GCTATTCATGAAGTA              CGGCAT TCATG ATGCCC              CGTCCGGAGGCGTCA  39 58
        lepB NONE
 C1O54_08330 NONE
 C1O54_08325 1872375 .. 1872393 -  -5.3  -3.66178   CTTTCCAAGGCCAAA            CCGG-ACA TGAT TGTTCCGG             ACCTGCTTGTTCTGC  56 445
 C1O54_08285 1867006 .. 1867019 -  -6.7  -3.27298   TTTTTCAAGGATGAA               CAGGA TGGT TCCTG                GAAGCTGGACTGGCA  56 509
 C1O54_08275 NONE
 C1O54_08270 NONE
        uvrA 1862268 .. 1862282 -  -4.3  -4.81551   GAGTCATAGGAAAAA               GGAAT ACGTA ATTCC               TTTTTTGTTAAAAAA  74 174
 C1O54_08260 NONE
 C1O54_08255 1859635 .. 1859653 -  -6.6  -3.19463   TGCATGATTTATGAA             GGCAGGCC GTT AGCGTGCC             GCACTCATTTCTGCG  54 288
 C1O54_08235 1856760 .. 1856800 - -16.3  -3.72302   CGCAGAGCAAAAAAG  TTTGAGGCCTTGCAGAATA CTT CATTCTGCAAGGCCTCACG  AATGGGAAAATGGTC 100 36
 C1O54_08230 NONE
 C1O54_08225 1853639 .. 1853673 -  -8.6  -3.53012   CTTTCTCCCCTGAAA    GCCCC-GATGAAGAG CTGACT CCCTTCCTCTGGGGC     ATTATCAAAGAAATA  64 488
 C1O54_08205 NONE
 C1O54_08200 1850017 .. 1850029 -  -6.2   -2.8751   AGAGGAGGATAAGTA                CGCC CGTCT GGCG                AAAGTACGTTTTGAC  49 81
 C1O54_08190 1848941 .. 1848951 -  -5.4  -3.84389   CATCCAAGAATACAA                 TGTG TAC CACA                 ATATGGGATCCTGGT  59 129
 C1O54_08165 1839816 .. 1839846 -   -14  -4.06505   CGAATACATGACAAA       GGCCTCCGGTGC GTTGAGT GTACCGGAGGCC       TTTTACATATGGGGA 100 72
 C1O54_08150 1837380 .. 1837400 -  -3.2  -4.93696   TGGAAAGATGAAAAA            CACCCC TGTTGCGGC GGGGCG            GCCGAACCTGCAGCC  73 280
 C1O54_08130 1835594 .. 1835619 -  -9.8  -5.27335   GCCTGCAAATAAAAA         CCCCGTTTTCC GGGAA GGAAA-CGGGG         TTGGAAAATTGCTGA 100 50
        tilS 1834078 .. 1834111 -  -9.8  -2.78508   CACGGTGGAAAATAT    GGCCTATTTT-GCCGT AGAG ACGGCCAAAAT-GGCC     CGCCACATGCTGGGT  63 447
 C1O54_08115 1832473 .. 1832486 -  -9.5  -2.64299   GAATACGGGAAACAG               GCCGC CCGT GCGGC                TGCCGCCATGGCCTG  65 73
 C1O54_08105 NONE
 C1O54_08100 NONE
 C1O54_08095 NONE
         mfd 1823173 .. 1823193 -    -4  -3.84017   CAACGGTAAAGAGAA            GCAGATTT GATGG AAAGCTGC            CGGAGCGGTCTGGCG  57 162
 C1O54_08070 1819596 .. 1819614 -  -5.8  -4.36914   CCTTGGTTGAGAAAA             CCGGGACG AAC CGGGCCGG             TGAATTTGGATTGAT  72 478
 C1O54_08010 1809105 .. 1809132 -  -5.7  -5.92399   CAAGAAAACAAAAAA        CGCAAGCT-TTG ATAAA CAATAACTTGCG        GAACAAACTGGTACG 100 33
 C1O54_07975 1799305 .. 1799322 -  -4.8  -3.60098   ACTGCGGATTTGAAA             TGCGCA GATGAA CGCGCA              TGGATTGAGAGCGTT  54 47
 C1O54_07970 1797435 .. 1797448 -  -5.2  -3.05384   TTTTGTGGCAGGGAA               GCGG TGGAAC CCGC                TTCCCTGCCGGTCCG  51 132
        hisS NONE
 C1O54_07935 1788320 .. 1788347 - -15.6  -5.93809   CCTGCATAAAAAAAA        CCCCGGATGGAA TGAT TGCCATCCGGGG         GTTTGTTTAAGGGAT 100 45
 C1O54_07900 NONE
 C1O54_07865 1773683 .. 1773693 -  -6.8  -3.01712   GCCGCTGGCGGAACA                 GGCT GGA AGCC                 CGTGATGGAGAATAG  54 313
 C1O54_07850 NONE
 C1O54_07845 NONE
 C1O54_07840 1765684 .. 1765709 -  -3.1  -3.29043   AATGTTGCGGGAGAA         GTCCGGGGGAT GGTG AGCCCCACGAC          GATTTCCCGGTTGTC  46 321
 C1O54_07835 NONE
 C1O54_07830 1764628 .. 1764649 - -12.3  -5.17786   GAATAAAATCAAAAA           GGCCGTCTC CGGA GAGACAGCC            TTTTTCTTGAAACTG 100 39
 C1O54_07825 1763163 .. 1763173 -  -2.4  -3.61715   CATCGTCGGCAAGAA                 CCGC TTC GGGG                 AGATTGGTTACATTG  48 112
 C1O54_07790 1758948 .. 1758964 -  -2.2  -4.06678   ATCGACTTAGACAAA              TTGCCG GACGG CTGCAA              GAGCCATCTGCTGGC  56 184
 C1O54_07780 NONE
 C1O54_07775 1757127 .. 1757150 - -11.1  -5.32882   TATTACTAGAAAAAA          GCCCTTGAT TTTGAT ATCAAGGGC           AGAACAGTTTTTTGA 100 53
 C1O54_07755 1755247 .. 1755272 - -16.9  -5.07486   TATGCCCAACAAAAA         GGAGCTGCCCC GATA GAGGCAGCTCC          TGAATATGGTAGGGG 100 47
 C1O54_07750 NONE
 C1O54_07745 1752634 .. 1752646 -  -3.3   -4.0371   TATTTTCTATAGAAA                GCCCC CGG AAGGC                TCTCACAAACGCGTG  58 449
 C1O54_07695 1744992 .. 1745009 -  -6.3  -4.84918   GTCAGAAAGAGAAAA             TTTCCCG CTCA CGGAAAA              ACGGGTCGGCATTAT  78 37
 C1O54_07650 1738172 .. 1738184 -  -4.8  -3.57561   GGCCAAGTGGTGAAA                GCTG CGCGC CAGC                TGGTGGCCCTGCATG  54 110
 C1O54_07640 1736801 .. 1736828 - -17.1  -5.29846   AATTGCAAACAAAAA        GGCGCCTCCAT TGCTTG ATGGAGGCGCC         CGGAGTAATCTGTCT 100 55
 C1O54_07635 1736112 .. 1736126 -  -2.1  -2.61144   TCACGTCCGAAACAT              CGGCAC ATCA GT-CCG               TGCGTCCCATCATTT  39 18
 C1O54_07630 NONE
 C1O54_07625 1735267 .. 1735281 -  -2.1  -5.06414   TGCGGCCAATAAAAA               GAGCT GAAAA AACTC               CGGGCAGGAAATGGC  74 63
 C1O54_07595 1731033 .. 1731068 - -16.9  -3.80026   GAATGAAAGAGAGAA    CGCCGGACCGGCC TTGTTGAATG GGCCGGTCCGGCA     ATGGGGAAAGGAGAA 100 44
 C1O54_07590 1727775 .. 1727804 - -17.1  -4.74801   TAATGTGATGAAAAA       GCCGCCGAGTTCC TGAT GGAGCCCGGCGGC        AGGAACGGAGTTTTT 100 51
 C1O54_07585 1724980 .. 1724996 -  -3.7  -2.74192   TACTTTTGAATATTA              TTCATTC CCG GAATGAT              AGATGGTTAGGAAAG  44 32
 C1O54_07580 1724102 .. 1724113 -  -7.2  -4.28069   AGAGAAGGCAAGAAA                CCGG GAAC CCGG                 GAAGTCTGGCGCAGG  76 54
 C1O54_07485 NONE
 C1O54_07480 NONE
 C1O54_07475 NONE
        xseB NONE
         dxs NONE
 C1O54_07460 NONE
 C1O54_07455 NONE
 C1O54_07450 NONE
         der NONE
 C1O54_07440 1699720 .. 1699744 -  -2.8  -3.13403   GTTCCGGGATCAATA          CTTTCCCC TTATCCATT GGGGGAAG          GTGGAGGAGGATGCT  43 206
 C1O54_07405 NONE
 C1O54_07400 1687755 .. 1687782 -    -4  -3.31248   CAATAGCGGGGAGAA        TGCCGGCGTATT GAAT ATTGCTCCGGCA         GCCAACAGCAGCTCC  48 217
 C1O54_07385 NONE
 C1O54_07350 1677419 .. 1677448 -  -4.8  -3.39327   CCTGTACATGGATAA       CGCGTCGCCCTT ATCAAA AGGGGCGCCGGG        GATATCCCCCCCTGA  52 9
 C1O54_07345 NONE
 C1O54_07340 1673722 .. 1673756 - -12.9  -5.33866   GAAATGGATAAAAAA    TGCCCGCCCCG-GCAA ATTA TTGATCGGAGCGGGCA     GAGGCACTGTGACTC 100 69
 C1O54_07330 NONE
 C1O54_07325 NONE
 C1O54_07320 1671846 .. 1671858 -  -3.3  -4.30978   TGGAAGTGATTAAAA                TGTGG TTT CCACT                TGAATCCGCAGACAG  61 61
 C1O54_07315 NONE
 C1O54_07310 NONE
 C1O54_07305 1668431 .. 1668449 -  -5.9  -4.07687   AGCCGTTCGGGAAAA             GGCGGGA GCCCT CCCCACC             TATGTGGAAGATACG  66 269
 C1O54_07280 NONE
 C1O54_07275 1661797 .. 1661809 -  -6.2  -3.53012   TGCCGGGGTTGGAAA                GGGC TCATT GCCC                GGCAGGGCATCCGGT  59 68
 C1O54_07260 1659257 .. 1659271 -  -2.8  -4.37886   GGACGCGTCATAAAA               GGATAA TAA TTTTCC               GATAAACTGTGATAT  61 84
 C1O54_07255 NONE
 C1O54_07250 1658180 .. 1658208 - -13.2  -5.06451   GATCAGGGTAAAAAA        TCCCTTCCCGCC ATGGG AGCAGGAAGGGA        GGTATGAATAAAGGG 100 49
 C1O54_07220 1650262 .. 1650287 - -11.8   -5.4505   CGCTCCAATAAAAAA         CCGCCTGCCG GATGAA CGGTAGGCGG          TTTGATGGAAAGGGG 100 48
 C1O54_07215 NONE
 C1O54_07210 1647419 .. 1647436 -  -5.5  -2.62184   GCCCGCCCCAGATGA             CCGTCCA TGGC TGGACCG              TGCGGAACGCTGGCT  46 253
 C1O54_07185 1640019 .. 1640039 -  -6.8  -3.72576   GTTTGTCGGAGTAAA            GGGGGTTC TGTGT GAAGCCCC            TGCTGTTTCTGGTAT  64 58
        thiE 1627036 .. 1627057 -  -6.5  -3.61328   ATGAAGATGCTGAAA           GAGGCGGAT CTTC ATCCGTCCC            TGAGGGCGTATGCCC  60 458
 C1O54_07085 1606239 .. 1606251 -  -3.3  -2.70932   GTCTCCGCTGAAGGA                GCAGG CCC CCTCC                GTGACGGATGACCAG  40 469
 C1O54_07070 1603088 .. 1603117 - -12.2  -5.00616   TCGTGCCGCAAAAAA       GGCATTCCGGCC GCAAAA AACCGGAATGCC        CTGGTGAGAAAAATC 100 52
 C1O54_07055 1599010 .. 1599026 -  -6.5  -3.92324   CCCCTGAACAGGAAA              GCTGGGA TTT TTCCAGC              GGGGACGTATGGTTG  66 353
 C1O54_07035 1594398 .. 1594411 -  -3.1  -4.46926   GAGGTGATGAGAAAA               GTTGA TGCA CCAAC                TTTTGATGTCCGCAG  64 214
 C1O54_07015 NONE
        lpxD NONE
 C1O54_06990 1587104 .. 1587131 -  -6.2  -4.60924   GAAATCCGTCAAAAA        GCCGGTGAGGGCC CTC GGC-CTGACCGGG        AAGAAGGGAAGTTTC  75 157
 C1O54_06965 NONE
        rpsU 1580896 .. 1580921 - -11.9  -4.89009   AGAGGGAAGCAAAAA         GGGCAATCCTT GAGA AAGGGTTGCCC          TCATGGAAATTGGGT 100 65
        hemL 1579513 .. 1579527 -  -2.8  -2.78816   CGACTGCTGAGGACA               GAAGCA GCA TGGTTC               CTGTCATTTGTCTCA  41 94
 C1O54_06950 1578454 .. 1578467 -  -8.1  -2.83271   CCAGTGGGAGAAGGA               GGGCT GCAA AGCCC                ACGATGGCATCCGCT  59 43
 C1O54_06930 NONE
 C1O54_06925 NONE
        ribH NONE
        nusB NONE
 C1O54_06910 NONE
        rlmN 1567654 .. 1567674 - -12.6  -4.17089   TGCAAATTCGGAAAA            GCCCCGTT CCGTC AACGGGGC            GTCCATCCGTTCTTT 100 16
        dnaB 1566003 .. 1566014 -  -3.6  -4.85599   TTCATTTCATAAAAA                CGCC TCTT GGCA                 TGGAAGGAAACGCCA  72 121
 C1O54_06895 1564841 .. 1564867 - -17.4  -5.08255   ATCTGGAAAATAAAA         CAGCCTGTACGC GGG GCATACAGGCTG         TTGAGAAAAGATAGG 100 53
         pyk NONE
 C1O54_06880 1561455 .. 1561474 -  -7.8  -3.09492   TGGTGAAGGGTAATA            GCTGGGTC ACGG GAGCCAGC             CTGGTTTATGCTTTC  59 31
 C1O54_06840 NONE
 C1O54_06835 NONE
        dprA 1551843 .. 1551866 - -14.6  -5.52384   GCCGGACGAAAAAAA          GCCGCGGATC AAAC AATCCGCGGC           CTTTTTTCTCTATTA 100 492
 C1O54_06825 1550773 .. 1550793 -  -9.7  -3.26722   GGGAGACCTACAATA            CCTGCCTGT AAC ATAGGCAGG            ACTGATAGCGGGTCA  70 77
 C1O54_06820 NONE
        gcvT NONE
        gcvH 1548009 .. 1548034 - -14.1  -4.86731   GCGGGCCAAACAAAA         TGCCCCGG-GAT GGA ATCACCGGGGCA         GGGGGAGGAAGGAAT 100 44
 C1O54_06805 1545058 .. 1545083 - -11.2  -5.64873   TTTAACAATAAAAAA         GGCTGTCCCA TTTATT TGGAACAGCC          TTTTTGAAAGGTGGG 100 51
 C1O54_06800 1543427 .. 1543437 -  -6.8  -3.15249   GATACGCGTCATCAA                 GGCA TGG TGCC                 GTTTTGAGGGCCGTG  54 401
 C1O54_06775 NONE
 C1O54_06770 NONE
 C1O54_06765 1535088 .. 1535102 -  -4.2  -3.56643   GGGATAGCGGGGAAA               CTGCCT GTG ACGCAG               TCATGCCGCCTGCCG  54 128
 C1O54_06760 1534459 .. 1534471 -  -4.8  -3.22388   CATTGAACGGATGAA                CTGG GTGTA CCAG                CATCCTAGAGGAAGG  50 104
        purM NONE
 C1O54_06750 1531459 .. 1531472 -  -3.1  -2.99859   ACCCAAAAAAAGGGA               GCCGCT ACA AG-GGC               AAATCGTATGCACGG  42 16
 C1O54_06745 NONE
 C1O54_06740 NONE
 C1O54_06735 1529206 .. 1529223 -  -5.5   -2.7419   AGACGATTTGAAGCA             CGCCCTT TTTT AAGTGCG              CCGGCGGGCGAGTTC  48 121
 C1O54_06730 NONE
 C1O54_06725 1528202 .. 1528215 -  -2.4   -2.9043   CGAAGAAGAACAGGA               GCAT TTTCAT ATGC                GTCCATGATAGAAGA  41 95
 C1O54_06720 1527625 .. 1527649 -  -2.8  -2.62983   TGCATGCTGATACGA         GGGGTGCTGGCT CAG ATCC-GC-CCCC         GGCGGGTGCTGATCA  40 12
 C1O54_06715 NONE
 C1O54_06710 NONE
 C1O54_06705 NONE
 C1O54_06700 1521530 .. 1521555 - -17.7  -5.32882   GATCATCATAAAAAA         GGCGGAAGTTC CGAT GAACTTCCGCC          CCCTGTAAAGCAGGC 100 46
 C1O54_06690 1517269 .. 1517293 -  -3.4  -3.04792   GGAGGAGGTGGAACA         GGCTGCCGCCC TGGT GGGCTCC-GCC          GTTCGGAAGGTGCGC  42 258
 C1O54_06680 1515368 .. 1515393 -  -7.5  -2.72144   GTAGTTTTGGGAAAG         GCCGCCGGCAT TTAC ATGCCGACATC          GGATCGTGGGGCAAA  56 53
        rsgA 1514200 .. 1514211 -  -2.2  -3.31144   TTTGCAGTTTGACAA                GCCA ATTT TGAC                 GGTGAATCAGTCATG  44 32
 C1O54_06670 1513062 .. 1513072 -  -8.2  -4.27617   CAGATGTGATGAAAA                 CCGC TTG GCGG                 ACGTGCTCAAGGAGA  77 149
 C1O54_06650 1509958 .. 1509997 - -14.2   -4.9725   ACGCGGAGAGAAAAA  CGGCGCGTCAGAGGGAGA TTGC CCTCCTTCTGCTGCGCCG   GCGCATTCCGTGCCA 100 62
 C1O54_06625 NONE
 C1O54_06620 1503124 .. 1503134 -    -4  -4.53034   TTTAGACAAGCAAAA                 TTTC ATG GAAA                 AATGAGCGAATGGCA  66 485
        rplU NONE
 C1O54_06605 1502384 .. 1502413 - -19.3  -5.05079   AGAAGGACAGAAAAA       GGGGCGGTCATCC CTGT GGATGGCCGCCCC        TGCAGGGAGATAGAG 100 52
 C1O54_06600 NONE
        sufC NONE
        sufB NONE
 C1O54_06585 1498271 .. 1498291 -  -4.1  -3.53012   TTTTCTCTGCGGAAA            GAAAAAAGA ACC TGTTTTTTC            CATTCTTCCATTCCC  52 80
 C1O54_06580 NONE
 C1O54_06575 1494666 .. 1494677 -    -3  -4.26903   GTTATTTCATGAAAA                GTTT CCTG AAAC                 GGAAAGGAATATGAA  59 102
 C1O54_06570 1493025 .. 1493055 -  -3.9  -3.35597   CTCATGCGTGAAAGA       CTAACCCCGGCGC CGTTC ACGTCAAGGTCAG       AATGGTGAAGGAGGC  50 69
        bioB NONE
        bioA 1490545 .. 1490583 -  -9.4  -4.79352   GCATTCATAAGAAAA   CCTGGGCGCGGCGGCT GTATTGT AGCTGCCGCATCCCGG   CTTTTGTCAAATTAT  91 113
 C1O54_06555 1489614 .. 1489632 -  -8.2  -2.78596   CATGGCGGTATTAGA             TTGCAAGG TAT CCTTACAA             ACCCCTGTCCCGAAG  59 80
 C1O54_06550 1488463 .. 1488495 - -19.9  -3.17075   CTCTCCGCAATGTAA      CATCCCCCGATGCGC GTT ACGCAACGGGGGATG      AAAGGAGGGAGGTTG 100 58
 C1O54_06510 NONE
 C1O54_06445 1466871 .. 1466887 -  -6.5  -3.31726   TTTTTTCAGAGAACA              CCGGC AGCCATG GCCGG              GAGTTCCGCCGCCCG  58 42
 C1O54_06440 NONE
 C1O54_06435 1463527 .. 1463540 -  -2.3  -3.63515   GCCTATTTTGAACAA               CTGCT CAAT AGCTG                GAGCGCGTTTATGGT  48 154
 C1O54_06425 NONE
 C1O54_06420 NONE
 C1O54_06415 NONE
 C1O54_06410 1459274 .. 1459314 -  -7.7   -4.8622   CCGTTCAATGAAAAA  GGCATCCGTGACTGA TTTGTTACTTT TGAATCACGGATGCC  TGAAAGGAATGGGAA  85 50
 C1O54_06405 NONE
 C1O54_06400 1457195 .. 1457230 - -19.1  -4.18018   TCCGGGTACGGAAAA    GGCCGGAAAAGGAGG TCATTG CCTCCCCTTCCGGCC     CGGGAAATCAGCATG 100 49
 C1O54_06395 1456579 .. 1456589 -    -4  -4.23892   GTTAACGAGGCAAAA                 GAAA GCC TTTC                 CATAAATACCAGAAT  61 101
        cysE 1455580 .. 1455602 -  -2.7   -4.2018   AAATGTTCAAAATAA           GCGCATTGA GAATT TCAATGCAT           TGAGGTTGAAACTAT  59 149
 C1O54_06385 NONE
 C1O54_06380 1449643 .. 1449673 - -19.8  -3.90744   GCCCGCCGTAAACAA       GAAAGCACCGCGGC ATG GCCGCGATGCTTCC       GTTGATATATACTCC 100 53
         tkt 1445067 .. 1445097 - -10.4   -4.7497   GGGAGGCATGAAAAA       GGGTCTGTCCCG GCGGATG CGGAACAGCCCC       TGAAAGGAGATGAAG 100 56
 C1O54_06355 1441788 .. 1441815 - -10.5   -5.0925   TGGTAAAATGAAAAA        TGGGGGCCGGC GGAAAG ACCGGCTCCCA         TGGGAGGGGGGAAAG 100 45
 C1O54_06350 NONE
        purL NONE
 C1O54_06340 NONE
 C1O54_06335 1437259 .. 1437287 -  -5.7  -4.64334   AAGCGGGGAATAAAA        GCTCTGCCTGCAC AGG GAGCTGGCGGGGC        CTGGAGACGGGAGCC  76 51
 C1O54_06330 1435880 .. 1435890 -  -4.6  -2.53164   TGACGGAGGAGGAAG                 CCAG GGC CCGG                 TGAACGGGAAGCGCT  44 226
 C1O54_06315 1431250 .. 1431271 -  -5.7  -3.12999   GTACGGCAGACGCAA           GGCCGGAGC GCTT GCTCCGGAG            ATTCCGTCTTTAGTC  53 35
 C1O54_06310 1429439 .. 1429463 - -18.6  -5.00616   TGGCGGCGTAAAAAA          GGCCGGGCGA GGGTA TCGCCCGGCC          CGGAAAGCCGGATTT 100 51
 C1O54_06305 1427877 .. 1427907 - -24.1  -3.62224   ATATTTCTTTAATAA       GGGCCGTCTCCCC GTAAG GGGGAGACGGCCC       TTGTGTTGAGTTTTT 100 421
 C1O54_06285 1422219 .. 1422229 -  -2.4  -5.15969   CTGGAAGCCAAAAAA                 CAGG AGG CCAG                 CGCTGTAGGCACCAA  75 231
 C1O54_06255 1418456 .. 1418469 -  -8.1  -2.68942   ATTGCCCGACAGAAT               CCGGA CTTT TCCGG                TTTTCCCTTACAAGA  58 422
 C1O54_06250 NONE
 C1O54_06245 NONE
 C1O54_06240 1415806 .. 1415817 -  -4.4  -3.85698   CGCCGGTTTCACAAA                TGGA ACTG TCCA                 TCCCTGAGCAGGGGT  59 325
 C1O54_06195 1410755 .. 1410780 - -14.8  -5.64421   ATTGCAAAGAAAAAA         CCGTCCGGAA TACCTT TTCCGGACGG          TTTGATAAAGAGCGG 100 56
 C1O54_06190 1409109 .. 1409139 -  -4.7  -4.62471   TTCAACCTGCAAAAA      CG-CCCGGCG GAAAAAGGGGGA CGCCGGGTCG       GTTCCGGTTTTCACC  70 36
 C1O54_06185 1407780 .. 1407791 -    -3  -3.26449   CGGGACATAATGGAA                TGAT ATTA ATCA                 GGAACACGCATTGTT  46 59
 C1O54_06180 1406957 .. 1406980 -   -16   -4.8048   TCCGGAGATGAAAAA          GGCCGGTCCC GTGA AGGACCGGCC           TGTAGAAAGGGTGGC 100 53
 C1O54_06175 1405982 .. 1406003 -  -3.7  -2.78463   ACGGTTCCCAGGATA           TACC-CCGCC ACA GACAGTGGTA           TCATTCCATCGTACG  44 199
 C1O54_06170 1405327 .. 1405337 -  -2.4  -3.12304   AGGAGGAAAAAACAG                 GCCG TTC CGGA                 AAAATCCGTCCTGCG  42 123
 C1O54_06165 1403491 .. 1403515 -  -6.3  -3.68798   TGTGAAAATAATGAA          TGGTTCCCGGA ATG CCCGGGAGGCA          GGAATGTTGCCGCGG  62 194
 C1O54_06160 1401950 .. 1401975 -  -8.3  -3.53091   ATTCCTTTTTTGAAA         CCCTGTAGACC CAAT AGTTTACAGGG          TTTTTTCTTTCTTGT  67 226
 C1O54_06135 1399122 .. 1399134 -  -6.2  -4.62904   AAACAGGTTCAAAAA                GCCC GGCAG GGGC                GCCAGCTTACCCTGA  75 217
 C1O54_06125 1397807 .. 1397823 -  -2.1  -4.60255   AGAACCGCTTAAAAA              CCCAGGG CTT CCCTCTG              CCAGTTCAACAGGGT  65 2
 C1O54_06120 1396540 .. 1396553 -  -3.8  -3.53012   CGGCGTTCCTGGAAA               CTCC TTCAGT GGAG                GATGCGGTGGCAACT  52 17
        lpxK NONE
 C1O54_06110 1390704 .. 1390727 - -12.4  -2.96405   TCTATGGAAAAAGAG          CGGCGGCC GGATATTT GGCCGCCG           ACGGAAGGGGAAAAA  76 68
 C1O54_06105 NONE
 C1O54_06100 NONE
 C1O54_06095 1388227 .. 1388239 -  -9.1  -3.30798   GATAATGAATCAATA                TGGCG TTT CGCCA                TCTGCCCGTTAGGTT  67 85
 C1O54_06090 NONE
 C1O54_06085 1386509 .. 1386524 -  -3.2  -3.40899   AAGGTTTGAGCATAA              CCCCAT CGCA ATGCGG               GATGCCGGCATCGCC  48 163
 C1O54_06070 NONE
 C1O54_06065 1382966 .. 1382993 -   -20  -3.73402   AGACCTTGGACGAAA        GCCGCTTCATCC GGGT GGATGAAGCGGC         TTTCCAGTAAAAAAT 100 4
 C1O54_06055 1381621 .. 1381643 - -13.5   -5.1356   GTGGAGCAATAAAAA           TCCTCCGGT TGAGG ACCGGAGGA           TAAAGGAAGGCCCGC 100 94
 C1O54_06035 1371784 .. 1371799 - -11.8  -5.14563   TTCTGGACGAAAAAA              GCCGCC CGGA GGCGGC               TGTTTCTTCTGAACA 100 44
 C1O54_06030 1370074 .. 1370102 -  -5.3   -4.7254   AGCGGTCATGAAAAA        CAGGGAGCC AATCTTTCTCA AGCTCCCTG        GATGATGGGCTGTCA  73 38
         maf 1369200 .. 1369211 -  -7.2   -3.5936   TGGAAATGCTGGAAA                GCCG TGTC CGGC                 GCGCCCGGTTCCTGA  63 293
 C1O54_06005 NONE
 C1O54_06000 1361609 .. 1361631 -  -7.6  -4.37067   GAAAGAGGAGGAAAA           GGCGGCGGAA TAA TTCCGCAGGC           GTTTTGCGTGGCTCT  76 60
 C1O54_05990 1358986 .. 1359007 -  -2.9   -3.2241   GAGCGTGTAGAAAAC           CCAGTAGAA AGAG TTCATCTGG            AGGAGAGTTTTTGTT  46 18
 C1O54_05985 NONE
 C1O54_05980 1357266 .. 1357287 -  -5.8  -2.54098   TGGGTGAAGGAATAG           CGCCC-CGG AAATG CCGCAGGCG           GACGCCTGTTCGTTG  49 58
         rnc 1355841 .. 1355851 -  -2.4  -3.72576   TTTCTGTCTATCAAA                 CCAG CCA CAGG                 AGTGTCCAAGGCTTA  50 77
 C1O54_05965 1354097 .. 1354114 -  -9.1  -2.57132   CTTTCCCCGGATAAT             GTCCGCA TTGC CGCGGAC              CGCCTGGGCGTTCCC  61 339
 C1O54_05940 1350738 .. 1350767 - -14.9  -3.01712   TGTTTGTGGTGAACA       GGCCGCGGACCGG ATTC CCGGCCCACGGCT        GGTGGGCAGCAGCTT  86 39
 C1O54_05935 NONE
 C1O54_05930 NONE
 C1O54_05925 1347266 .. 1347286 -  -6.9  -4.07687   AGTGCTGCTGCAAAA            GGCTACA TGTTTGC TGTAGCC            GTTTTTCCCAATAGA  69 381
 C1O54_05920 NONE
 C1O54_05915 1345366 .. 1345381 -  -3.2  -3.62775   AGTATCGCTCAATAA              GGATGC GAAT GGATCC               TCTGGGCTTTTCCTG  49 212
 C1O54_05910 1343850 .. 1343867 - -12.7  -5.14563   GGCCTGATGAAAAAA             GGCCGTG AATA CACGGCC              CTCCCCAAGCTGATG 100 149
 C1O54_05900 1342066 .. 1342095 -   -10  -3.30783   TGACCATAATGAACA       GCCGCGCGCCG GGGAAATTG CGGCGCGCG-C       GGCGGGCGGAGAAAG  68 522
 C1O54_05875 1338533 .. 1338545 -  -3.3  -3.70571   CATAAATACCTTAAA                CGGTA TTT TCCCG                AACTGTTCCTTCGGG  53 228
 C1O54_05860 1333840 .. 1333876 - -21.1  -3.21099   CTGCCGGATGATGAA    TAAAACCCCGCATGCGT TTC AGGCATGCGGGGTTTTA    TTGAAATAGCCGGAG 100 51
 C1O54_05850 1332226 .. 1332240 -  -2.8  -3.04398   TGGCCTCCGGAAAAG               GAAAGG CCT CTTTTC               GGTTCAGGAACTGAA  44 29
 C1O54_05840 1328860 .. 1328880 -    -6  -3.56594   TCAAACTTTCTCAAA            CGCCCGGC ACTGG GCCCGGCA            AATTCGCCGCCTGTA  58 335
 C1O54_05830 1328137 .. 1328152 -  -4.6  -3.42996   CATGAGCTATGACAA              CGGCAA GACC TGGCCG               GTGAAGAAATTGCTG  52 308
 C1O54_05820 1325041 .. 1325066 - -10.5  -5.18355   TGTAAAAATGAAAAA         GGATGGAACCA TTAC TGATTCCACCC          TTTGGTGAGAGAGTT 100 167
 C1O54_05815 1323991 .. 1324006 -  -4.8  -2.60688   GAACCATTTTAGAAT              TAATTG CTTC CAATTA               TTTTAATTAAAAATG  44 32
 C1O54_05810 1323260 .. 1323270 -    -4  -3.53012   TTTGTTGCTTTTAAA                 GAAT AAA ATTC                 TCATCCACTCCCTCT  52 10
 C1O54_05805 NONE
 C1O54_05800 1320073 .. 1320091 -  -2.5   -4.1964   GGGAAGACGGGAAAA             TTTCTTC CGGAT GAAAAAA             AGATTGCCAAACCTC  57 259
 C1O54_05790 1318384 .. 1318401 -  -4.7  -4.67651   ACAGTCTAAAAGAAA             GCGGGCC TGAT GACCAGC              ACAAAACGCAGGACT  70 65
 C1O54_05785 NONE
 C1O54_05780 1316084 .. 1316112 - -14.7  -5.61881   CCGGAAAAAGAAAAA        GCGCCTTTCCA GAAAAGA TGGAAAGGCGC        GGTGACAGGCTCAAG 100 55
 C1O54_05770 NONE
 C1O54_05765 1312311 .. 1312335 -  -2.7  -3.06796   CCGGAGGGGAGTTAA          GTCGGCTTGTT AAA AAATAGCCGGC          TCTGGCATTTCCCCA  44 102
 C1O54_05760 1310776 .. 1310788 -  -3.3  -2.52464   GGTTCTTTTAATGTA                TTGCG GTA CGCAG                GGCATGCGCGGCATG  39 155
 C1O54_05750 NONE
 C1O54_05745 NONE
 C1O54_05740 1305895 .. 1305923 -  -5.1  -3.44848   CGGTGTCATGAAAGA        GTCTGCCTTTGGA GCC CCCTGAGGCAGGC        AGGGGAAATGCTCAA  54 37
 C1O54_05735 NONE
 C1O54_05730 1304070 .. 1304080 -  -2.4  -4.14392   TGTGAAGCCCTAAAA                 GCTG CTC CTGC                 TTAAAAGCTGTTGGA  57 9
        miaA 1302921 .. 1302931 -  -6.8  -3.80573   GTCAGTATCAGGAAA                 TCCG CCG CGGA                 AAGATAGACTATGTG  63 190
 C1O54_05715 1300493 .. 1300520 - -14.9  -4.51777   AGAGGATAAGGAAAA        GGCCGACTCAC GATTTT GTGAGCCGGCC         TTTGAATATAGGGAG 100 56
 C1O54_05710 1299812 .. 1299841 -  -7.1  -4.07568   TCTTCTCTTGGAAAA       TCCGGAGACATTC ATGG GACAGTCTCCGAA        GTTCCGGAAAGTGTC  68 47
 C1O54_05695 NONE
        sdhA NONE
 C1O54_05685 1295028 .. 1295053 - -14.7   -5.7946   CCGGTAATAAAAAAA         CTCCCGACAGC CGAG GCCGCCGGGAG          TTTTTGTAGAGCGTC 100 58
 C1O54_05680 NONE
 C1O54_05675 1289672 .. 1289685 -  -2.5  -3.92522   CGGCAATTTTATAAA               TTTAT TTTA ATAAA                ATAGCTAAATAAAAT  53 67
 C1O54_05670 1288334 .. 1288350 -  -3.7  -4.37013   AATGAAGGAGGAAAA              CCTGT GGCGTAG ACAGG              AATCAATGCGGATTG  64 360
 C1O54_05635 NONE
 C1O54_05630 1280228 .. 1280254 -  -5.9  -4.10925   AGACATGGTTGAAAA        GAGGCTGGCA AAACGCCA TGCC-GCCTC         TTATTCCTCTTCCAG  66 26
 C1O54_05610 1273846 .. 1273884 - -22.7  -3.53012   TCCCTTTCCCGTAAA  TGCAGGAAGCCGGCCTTT CTTC AAAGGCCGGCTTCC-GCA   TGGTAAAATGGTTAT 100 37
 C1O54_05575 1264568 .. 1264584 -  -5.1  -3.62046   CCATGCGCGGAATAA              CCTCC GCATGAT GGAGG              AACTGCGGCGCGCCG  56 350
 C1O54_05560 1261919 .. 1261929 -  -2.4   -2.7035   GTTATTGAGAGATGA                 GGTC CCG GGCC                 TTGGCCAGGATTTGG  39 1
 C1O54_05555 1259759 .. 1259813 - -14.3  -2.99849   GAATAAGGGAAAGGA CAGGGACGGAGGTTTCCCGGACGCCC GGAG GAGCGTGCAAGGAG-CTCCGTCCCTG TTGGATGATTTTTGT  83 47
        rbfA 1259083 .. 1259098 -  -4.6  -4.07568   GTTGCGCTGGGAAAA              GGCTCT CCGG AGCGCC               GGTTTCTGAGATTAA  61 243
 C1O54_05530 NONE
 C1O54_05525 1250775 .. 1250791 - -13.7  -3.32844   GCCCTGACGGGAGAA              TGGCGCG GGG CGCGCCA              ATGCGGGAAGGTTTT  83 90
 C1O54_05520 NONE
        nagA 1248764 .. 1248803 -   -20  -3.27786   GGTAAAAGGGAGGAA  GGCGCGCCGGAAGG-GGCG GGA CGTCTCCTTCCGGCGCGCG  GAAACGCGGTTACGC 100 35
 C1O54_05510 NONE
 C1O54_05505 1246987 .. 1247001 - -11.4  -4.30014   CTGATGAAGTGAAAA               GGGGGA GAT TCCCCC               CTTTCCCTGTTGTTC  91 85
 C1O54_05495 1245647 .. 1245657 -    -4    -4.254   TGAATACTTAATAAA                 TTCA TAC TGAA                 AAGCAATATCAAAAA  61 34
 C1O54_05490 NONE
 C1O54_05485 NONE
 C1O54_05480 NONE
 C1O54_05475 NONE
 C1O54_05470 1239657 .. 1239670 -  -3.8  -3.64703   GGCCGGGGAGGGAAA               GAGC ATGGAG GCTC                CGTTCAGACCGGAAA  52 171
 C1O54_05465 1238294 .. 1238305 -  -3.6  -5.00616   GTCGTCCGGAAAAAA                GGCC AGAA AGCC                 TTCCGTTTGCAGCAG  76 209
 C1O54_05390 NONE
 C1O54_05385 NONE
 C1O54_05380 1220468 .. 1220501 -  -8.7  -2.55213   GATCCAGGGAACGGA     GGGCACGCTGGCTGG TTTC CCAACCCGCGTGGCG      GGTGAAAAGCTGGGC  58 441
 C1O54_05370 1218242 .. 1218261 -  -7.2  -2.80821   CCTTCAAAGACATCA            TCTCCTTC TGGC GAAAGAGA             GCAGAATGGAGATCA  56 3
         ffs 1218091 .. 1218113 -  -3.4  -4.13767   GTGGGGACTGTAAAA           TGCCGC CGGGAACGGAC GCGGCA           AACACGAACAAGCTA  59 5
 C1O54_05360 NONE
 C1O54_05355 1214037 .. 1214057 -  -4.1  -5.26875   CCGGCAAGGAAAAAA            TTTTCATTA AAA TGATGAAAA            GCTACCGCCGGTTTC  83 248
 C1O54_05330 1206920 .. 1206946 -   -18  -4.56597   GGCTTCCGGGAAAAA         GGTCCGCTCCAG ACC CGGGAGCGGACC         TTGGCATTCAGCATT 100 244
 C1O54_05325 1206144 .. 1206156 -  -4.7  -3.54129   GACATCCGTTTCAAA                GGCTG GGC CCGCC                CGGGCAAGGAAGGAT  52 391
 C1O54_05315 NONE
 C1O54_05310 1203216 .. 1203229 -  -3.8  -3.61398   GGCGCGGGGGAAGAA               GGAG GATTTT CTCC                GCCTGCTGGAAATGT  52 375
 C1O54_05300 1201357 .. 1201385 - -11.7  -4.08216   GGAGGTTTGGGAAAA        GCCTCCCGGAAAA TCA TATTCCGGGAGGG        GCGGGTATTGGGACG  90 45
 C1O54_05290 1198286 .. 1198298 -  -4.1  -3.34398   GGTCCGTGGTAAATA                CGCTT CAT AAACG                CTGTATGGAGTCGCC  50 161
 C1O54_05285 1196795 .. 1196813 - -14.6  -2.55999   CGATTGTACAGTAAT             GCCCGGAA AAT TTCCGGGC             GCTTTTCCGGAAGAA  81 378
        acnA 1193084 .. 1193099 -    -4  -3.39895   GTTCGGATGAACTAA              TCA-GGC CGT GCCGTGA              AGTTGCAGGTATATC  50 133
 C1O54_05270 1192040 .. 1192060 -  -2.4  -3.94188   ATTCAGGTCAAATAA            CCTGTTCC GGGGT GGTTCAGG            AGGCATCAAAAGCTT  53 317
 C1O54_05265 NONE
 C1O54_05260 1190096 .. 1190132 -    -3  -4.05446   GGCTTGAAGGAGAAA   GGCCGT-TACTACCA TGTGGCGC TGGCTGCAGACGGCC    TGCCCGTGTATTATC  58 432
 C1O54_05245 1185686 .. 1185719 -  -8.7    -4.323   GGCAAATAGGGAAAA     CGGCGCGG-ACGGCGT GAA ACGCCGGGCCGGGCAG     ATGGGAAATACAAGG  83 54
 C1O54_05235 1183552 .. 1183570 -  -3.8  -4.58685   AAATGTGCGGAAAAA             CGGAGAAT TCA ATCATCCG             TTTTTTGGGAGAGGA  66 15
 C1O54_05230 1182480 .. 1182525 - -16.9  -3.59262   GTCTACAGCCGGAAA CAG-GCGCCGCCCTGCCAGG TAAAAAC CCTGGCAGGGCGGCGTTCTT CCTTTTCGGAATATC 100 187
 C1O54_05205 1173069 .. 1173087 -  -5.2  -3.14132   GGCCCGCGCCAGCAA             CATGGCCT TGA AAGCCCTG             ACGGCATTTTCCTTT  51 237
 C1O54_05200 NONE
 C1O54_05195 NONE
 C1O54_05190 NONE
 C1O54_05185 1168828 .. 1168838 -  -5.4  -3.69354   CGCGACAAGGCCAAA                 TCCA TGA TGGA                 CAAGGATAAGAATTC  59 138
        recN 1163343 .. 1163361 -  -4.4  -4.25104   TCGTGCTGATGAAAA             GCAACCCC GCA GGCGTGGC             GGAAGCTGTCCAGCT  65 294
        mscL 1157042 .. 1157069 - -17.8  -5.32699   GTAAAGAGGAAAAAA        CATGCCGGTCCC GCAT GGAACCGGCATG         AACCGTTCAAAAGAA 100 42
 C1O54_05115 1155751 .. 1155761 -  -8.2  -3.14051   TGATCTGGATGAATA                 CGGG CGG CCCG                 CAAGCGGTGTTCCTG  62 115
 C1O54_05110 NONE
 C1O54_05105 1152831 .. 1152851 -    -9  -2.59564   TGGCTAGCCCATAAT           GCGGCCTCC GGAA GGAGGC-GC            CGCAGGACCCCGTCT  61 48
 C1O54_05100 1151571 .. 1151607 - -15.8  -4.12902   GAAGGAGGCTGAAAA   CAGGCAGGCCGCCTCCG TTTC CGGTG-CGGCCTGCCGG    GTAGTGATGAATGAA 100 53
 C1O54_05090 1150139 .. 1150151 -  -4.8  -3.53012   CCTCCGGTGCTCAAA                CGGA ATTTA TCCG                ATGACGAGGAATTTT  54 19
 C1O54_05085 NONE
 C1O54_05080 NONE
 C1O54_05065 NONE
 C1O54_05060 NONE
 C1O54_05055 NONE
 C1O54_05050 1140396 .. 1140412 -  -4.4  -3.01924   CATGCCGGGGCAACA              TGTCCC GGCAT GGAACA              TTACCTTACTTAAAA  47 35
 C1O54_05045 NONE
 C1O54_05040 NONE
 C1O54_05035 1136629 .. 1136661 - -17.9  -4.35461   GCAAGATGATGAAAA      CGGGGTTCCATTC GGAAAAA GAATGGAACCCCG      TGCTGAAGCGGTAAA 100 82
 C1O54_05030 1134787 .. 1134801 -  -2.8   -3.7511   GCGTCGAGAATACAA               CGAAGA GCG TCCTCA               CGGTTCCTGTGGCAA  53 139
 C1O54_05015 NONE
 C1O54_05010 NONE
 C1O54_05005 NONE
 C1O54_05000 NONE
 C1O54_04995 1131209 .. 1131221 -  -3.3  -4.57073   CATCCGCTGGAAAAA                GGCCT TCC AGTCC                GTCTGCTTGGAGGTG  67 232
 C1O54_04980 1127496 .. 1127514 -    -3   -2.7122   AAAGAAAGGCAGAAT             CAGGCCGG TTG CCAGCGTA             CAGATGAAGAGGGGA  40 6
 C1O54_04975 1126724 .. 1126737 -  -2.3  -3.95852   ATTTTATCAATGAAA               CGGAT TTGG AACCG                ATTCGAGATAAGACT  54 382
 C1O54_04945 NONE
 C1O54_04940 NONE
 C1O54_04935 1115869 .. 1115879 -  -8.2  -5.00616   CGCGCGCGGAAAAAA                 CGCC GCG GGCG                 GATGTATTGCTCATC  89 213
 C1O54_04905 NONE
 C1O54_04900 1106567 .. 1106587 -    -9  -2.74144   TTTTGATTCCGAAAG            CTCCGGAA CCCGT TCCCGGAG            GAGAAGACGTACTGG  60 91
 C1O54_04880 1102404 .. 1102424 -  -5.3  -3.24423   CCCAATAAGAGTTAA            CAGGCCGTA TTG TGCCGCCTG            ATTCCCGGAGATGAG  53 193
 C1O54_04820 1091436 .. 1091467 - -12.2  -4.40561   TTGCCGGAAAAACAA      TGAAGGGCGTCCCC TGAG AGGGCCGCCCTTCT       GATATAAAGATTCCC  95 96
 C1O54_04805 NONE
 C1O54_04800 1086497 .. 1086518 -  -4.3  -4.36914   GTCTGCCGGAGAAAA           CGCCTGTCC CTGC GGACATGCT            TTTTGCTTCCGGCAG  68 516
 C1O54_04760 NONE
 C1O54_04755 1075666 .. 1075692 - -14.5  -5.55769   TGGCAGAACAAAAAA         CCCTGTACGGA AAATA CCCGTACAGGG         GGTTGATGAAAAGGG 100 47
 C1O54_04735 1069482 .. 1069499 -  -8.3  -3.06087   AAGAGAGGGGGAATA             CCAGCGC GGCA GCGCAGG              CGCAGGTTAAAATGA  62 123
 C1O54_04730 1068964 .. 1069000 -  -4.9  -3.04144   GCCGGAGCGGGAACA    GGACATCCACCCCATGA GAA CCACGGGGAAGGCGGCC    AGAACAAGGAGAGGC  48 74
 C1O54_04725 1068046 .. 1068089 - -16.9  -5.63517   CCGGGAAACAAAAAA TGCCGGATAAGGTGATTGG TTTTAC CCAGTCATCTTATCCGGCA TTTTTATTTGCCCTC 100 225
 C1O54_04635 1053443 .. 1053453 -  -3.2  -2.97109   CGAAGTCAATGAAAC                 GTCA GAC CGAC                 CATGGAACAATAAGT  42 96
 C1O54_04630 1052785 .. 1052800 -  -3.3   -4.0641   TGTTATTCACATAAA              TGTTC TACGTG GAACA               TTTTTTATTTTCCAT  56 206
 C1O54_04620 1050342 .. 1050377 - -18.4  -4.28254   TCTTAATACTGAAAA    GGCCGCATGCGGAAAA ACGT CTTCCCGCATGCAGCC     TTTGGCGAATGGTTA 100 49
        ribD NONE
 C1O54_04595 1042786 .. 1042799 -  -2.4  -4.09685   GGCGATGCTGGAAAA               CGTT TTTCCT AACG                GGGGTTCCGGCAGGA  55 56
 C1O54_04590 1042177 .. 1042199 - -14.2  -5.70829   AAGATGAGAAAAAAA           CCCTGCAAGA ACG TCCTGCAGGG           TTGAAGAAGAAAACC 100 52
        hrpA 1038419 .. 1038436 -    -4  -4.85599   TCCATTTCAGAAAAA             GGCGCC GGATAA GCCGCC              TGTGCAAACAGCCTC  72 51
 C1O54_04570 1034815 .. 1034825 -  -2.4  -5.07652   TCTCTCAAAAGAAAA                 GCTG TTT CCGC                 TATTCCGCCAAAGGA  74 25
 C1O54_04565 1032483 .. 1032504 - -12.3  -3.06501   TATACTCTTACGGAA           CTGGGGCGCA GTC TGCGCCCC-G           TCCTGGCCTCCATGG  74 160
 C1O54_04555 1031604 .. 1031631 - -17.7  -2.62184   TTCCTCCCCATAGGA        GCGCGGCCCGC TTTCCT GCGGACCGCGC         CGGTGGAAAAACCGG 100 69
 C1O54_04550 1031175 .. 1031196 - -10.9  -2.96873   ACCTGTACCAAAGCA           TTGCCGGCA TGGG TGCCGACAA            ACCTGCGGAATAAGG  70 108
 C1O54_04540 NONE
        lysS NONE
 C1O54_04530 1024914 .. 1024927 -  -4.5  -4.56597   CCGGCCTGCGAAAAA               GCCCT GTTT AAGGC                GCAATAAGAACAGCG  68 99
        plsY NONE
 C1O54_04520 NONE
 C1O54_04515 1022548 .. 1022575 - -18.5  -5.23316   CACTATATGAAAAAA        GGGCTGTCCGC AAACAA GCGGACAGCCC         TTTTGAAATCTTAAC 100 50
 C1O54_04510 NONE
 C1O54_04505 NONE
 C1O54_04500 1019047 .. 1019062 -  -2.4  -3.53012   CGCCTGCCTTGTAAA              GCCGGG AAAA CCAGAC               GTATGGCCAAATTCG  47 231
 C1O54_04495 1017669 .. 1017705 - -15.3  -4.05714   ATCCTTAATGATAAA    GAAAAAGCCGCCTCA GCAACAG TGAGGCGGCTCTCTC    CAAAAAGAATTTTTA 100 38
 C1O54_04490 1016637 .. 1016654 - -11.3  -6.34616   CGAAAATAAAAAAAA             GGCAGCT TTTC AGCTGCC              TCCCAAATAACGAGG 100 48
 C1O54_04465 1011429 .. 1011462 -  -9.7  -5.53079   AAAACAGACAAAAAA     GAAGCCCTGTAATCC ATTA AAATTACAGGGCTTA      GAAAATTAGTGGCTC 100 35
 C1O54_04460 1010579 .. 1010589 -    -4  -3.29829   GATATGTTTTCACAA                 CTTT TCC AAAG                 CCTGTCTTTCGCCAT  48 9
 C1O54_04455 NONE
 C1O54_04450 NONE
 C1O54_04445 1008267 .. 1008286 -  -6.5  -3.55071   TCACACGGCCGGAAA            CAGATGA ATGCGG TCATCTG             TGGACAGCCTGTTCT  62 297
 C1O54_04440 1007746 .. 1007758 -    -2  -4.39426   TAGACTGTTAGAAAA                TTCT ACGGA AGAA                GAAACGAAAAAATAA  60 80
 C1O54_04420 1004201 .. 1004225 -  -7.1  -3.38314   GCCAACCCTGAAACA          TGGCCCTGG CAAGGCT CCAGGGCAA          ACACTCCGCTGCCCG  58 392
 C1O54_04400 1000663 .. 1000688 -  -8.3   -4.4261   GCTTGAAGAGGAAAA         TTCCCGCCCCT GTTC AGGAACAGGAA          GAGGAATCTCCCGTC  79 13
 C1O54_04375  993956 ..  993971 -  -3.2  -2.76291   CAAGCGGAAAACGCA              CCAGCA TCAC CACTGG               TTGTCCAGGTTTTTG  41 16
 C1O54_04370  993661 ..  993690 -  -7.1  -4.59109   CATACCTGCGAAAAA       CCGTCATGGGAAC CGCT GTTCCCATGGAGA        TAAAAACGCCAGGAA  76 56
 C1O54_04360 NONE
 C1O54_04355  990403 ..  990413 -  -2.4  -4.20806   CACCCGAAAATGAAA                 GGCC GCA GGCA                 CCTCCGCACTAATTT  57 34
 C1O54_04350  989773 ..  989788 -  -4.6  -3.38378   TCACATGTTAAAAAC              CGGGAT TAAT AACCCG               TTCCGTATAGCGGGC  52 2
 C1O54_04345  989202 ..  989212 -  -4.6  -3.12847   AACCCCTATATGCAA                 CAGC CAT GCCG                 CCGGAAGGAAAGCGG  48 73
 C1O54_04340  988980 ..  989000 -  -9.7  -5.72254   TGAAACAATAAAAAA            CGCGCTCTC TGA AAGAACGCG            CCATAAAATGAAAAG 100 41
 C1O54_04335  986901 ..  986934 -  -2.3  -3.85698   TTTCCGCCGCATAAA     CTCCCCCCGGTCAAG CCTT CCCGAACGGGAAAAA      TAGCGGAATCACCAC  53 2
 C1O54_04330  986447 ..  986468 -  -2.9  -5.75342   TGCCGGTAAAAAAAA           TAGGCGG CCAATATT CCGCCAA            CTGCCTTGCGGCAGA  91 111
        rfaD NONE
 C1O54_04290 NONE
 C1O54_04285  974916 ..  974926 -  -2.4  -3.14564   TCAGCGGCGCAGCAA                 CCGG GCT CCCG                 CCTTGCGTATTTTCT  42 0
 C1O54_04280  973485 ..  973505 -  -2.4  -4.42788   CGCAATGTCAGAAAA            CGGCTGCC CAAAC GCCAGTCG            CCGGACATCCCCCAT  63 424
 C1O54_04270  972520 ..  972548 - -13.9  -4.96848   GTTTTTATAGAAAAA        GCCGCACCTGG ACAATCA CCAAGTGCGGC        TTGAAAAGTCGTACT 100 57
 C1O54_04265 NONE
        truB NONE
        ribF NONE
 C1O54_04250 NONE
        secG  968831 ..  968855 -   -15  -4.06419   CCGGTGCACAAACAA         CCCCGGC-GCC TTCT GGCAGCCGGGG          TGTTTAAAAAGAATG 100 46
 C1O54_04240  967992 ..  968029 - -16.3  -3.07344   TTATGCCTGAATATA   CCGCGGGGCCTCACGGCC ATA AGCCG-GAAGCCCCGCAA   AATGAAGAGGCCGCG 100 68
 C1O54_04235  966578 ..  966588 -  -2.4  -4.36914   CCGGCCGGGAGAAAA                 GGCG GCA CGCA                 AAACTCCGTTTTCGA  63 283
 C1O54_04185  955613 ..  955625 -  -4.1  -3.67296   GATTAGCTATTGAAA                CGCAA ACA TTGCA                TCATCCCAATCTTGG  54 440
 C1O54_04180  949672 ..  949692 -  -9.1  -3.63762   ATACAGGATATATAA            CCTTCATTG CAT CAATAAAGG            ATTGATAGGATAGGA  70 100
 C1O54_04175  949190 ..  949203 -  -2.5  -3.46965   AAGAGAGGATGACAA               TATAA ATTA TTATA                TCTAATTATTCATAA  46 27
 C1O54_04170 NONE
 C1O54_04165  947434 ..  947456 -  -3.6   -3.2794   TTTCATTTATATGAA           TTTATTATAA TGT TTATAATTAA           TTTTTATTTTTAATT  48 22
 C1O54_04160  945881 ..  945905 -  -3.5  -4.08767   GCCACCTGGGCAAAA         GCGG-CTCCA TTTGCC TGGCGGCCGC          GGAACACGGTTACTC  60 175
 C1O54_04130  940630 ..  940640 -  -8.2  -4.09685   CGTGATTGTGGAAAA                 CGGC ACA GCCG                 TCACCCATCTTTTCT  73 511
 C1O54_04120  939235 ..  939258 - -13.8  -4.45544   TTGGACCAACGAAAA          CGGCTCCGTC ATCC GGCGGAGCCG           TTTTTTTGCGCTATT 100 259
        typA  935981 ..  936002 -  -6.5  -4.56597   TTTTTTCTGGAAAAA           CCCGCC-AAC AGG GTAAGGCGGG           AAACGCTTTCACCGA  76 316
 C1O54_04085  929956 ..  929988 -  -5.6  -4.25104   CTTTCTGCATTAAAA     GGC-CGGGAAAAAGC CCCG GTTTTCTCCCGCACC      CATGGGTCAAGAAAC  66 32
 C1O54_04065  925914 ..  925924 -  -3.2  -3.28712   GGGCTTCCCGCAGAA                 GACG CAT CATC                 CGGAATAAATGGAAC  46 330
 C1O54_04055  923192 ..  923218 -  -3.6  -4.05446   TTCGGGAAGGAGAAA         CGGTTTCCATTC CGG GCATGGGAACCT         CCGCCCGGACAAAGC  59 52
 C1O54_04045  920390 ..  920402 -  -4.8   -3.6849   ATTGAACTGCAACAA                CAGG CGTCT CCTG                AAGGACAACAGCGTT  56 39
 C1O54_04040  917927 ..  917942 -  -6.8  -3.59293   GGAAATGGAAACCAA              CGGCAC CATC ATGCCG               GATACGGAACTGCTG  60 468
 C1O54_03995  908982 ..  909017 - -12.7  -2.94232   CTGCCCGTAAACAAG   CCGGGCCCGC-TTCCTC CGGA GAGGAACGCAGGCC-GG    AAAGGTCTTTCGTCA  75 54
 C1O54_03960 NONE
        trxA  901770 ..  901802 - -20.6  -5.40072   TGCCCGGTAAAAAAA      CCGGCCTGCCGCAG TAAAT CCGCAGCAGGCCGG      CTTGAATGAATAAAC 100 53
 C1O54_03950 NONE
 C1O54_03945  900282 ..  900298 -  -6.5  -3.33792   ACCACGGAGAGAATA              TTCCGGA TTT TCCGGCA              GAGAAGGAGGGGATA  58 52
 C1O54_03940  898607 ..  898627 - -11.1  -3.85704   TGATTAACTACGAAA            CCGTTCCGG AAC CCGCAACGG            CCACGCTGGGCCTCC  80 247
 C1O54_03875  883622 ..  883638 -    -8  -2.97667   TGATTTACGAAACTA              TTCCGC CGTTC GCGGAA              CCCTGTCGAGCGCAG  60 75
        rpsB NONE
 C1O54_03865  881796 ..  881823 - -16.4  -4.97158   CCATATCAAACAAAA        GAACCGTTCCCC GCAA AGGGAACGGTTC         CAGAGATATTTCTGA 100 49
 C1O54_03860  880441 ..  880461 -  -8.3  -4.08394   ATAGGCCGGGGAAAA            GACGTCCAT GAG ATAGACGCC            GCTCTGATGGAGGAA  73 305
 C1O54_03735 NONE
 C1O54_03730  850597 ..  850607 -  -2.4  -4.72272   TCCCTTCATGAAAAA                 CGGG GAA CCCT                 GGACGTAACAAATGT  69 150
 C1O54_03700  843593 ..  843621 - -11.1  -5.36441   TCTGGATATAAAAAA        CAAGAGCTGTTCC GCA AGAACAGCTCTCA        TCCGCCGATTTTTCG 100 53
 C1O54_03670  837216 ..  837247 -  -8.6  -4.77759   ATAACGCATCAAAAA      GAGCAGGACTTCAG AAAC CGGGGGTCCTGCTC       TTTTCTGTAATGCCG  87 496
 C1O54_03655  836115 ..  836139 - -12.2  -5.26875   TCCGTAACGAAAAAA          CCCTGCAAGC AATGA ACTTGCAGGG          TTTTCAAATGGTTAC 100 34
 C1O54_03650  835619 ..  835639 -  -2.6   -5.6473   ACAACATGAAAAAAA           CGACCAGCCA CAT TGG-TGG-CG           ACGTTTCTCATGTTA  84 58
 C1O54_03620  828575 ..  828600 - -11.9  -3.33696   CGGCCCGGCAATCAA         TCCGGAACGAA CCGT TCCGCTCCGGA          CAGAATGCCGCAGGC  79 64
 C1O54_03615 NONE
 C1O54_03610  822409 ..  822434 -  -2.6  -4.54727   CTTCTGAAACCAAAA         TCCACTCTTTC GGATG GGAAGAG-GGA         ACCATGCCGTTCCAT  62 184
 C1O54_03605 NONE
 C1O54_03600 NONE
 C1O54_03595 NONE
 C1O54_03590 NONE
 C1O54_03585 NONE
 C1O54_03580  818732 ..  818749 -  -2.5  -5.86061   GCGGACGAAAAAAAA             CGCCCGC CGCC GCGTGTG              GGATTTTGAAAATGA  95 80
 C1O54_03535  812178 ..  812212 -  -7.2  -4.87592   GCAGAGAGAAGAAAA    CAGCGGAACG-AACA GCCCCG TGCCGCGCTCCGCTG     AATGAATGCCGGAAT  85 45
 C1O54_03530  810137 ..  810153 -  -2.3  -4.44667   TCCGGCAACAACAAA              GTTTTTT GAA AAAAATC              CTCTCAGCTTCCGGA  62 29
 C1O54_03490  799743 ..  799770 - -11.4  -3.72324   TACCGGTATCAAGAA        GAATGACGCCGCT ATG AACGGCG-CATTC        CTTCCGCAACCTCAG  82 118
 C1O54_03485  798617 ..  798640 - -14.6  -5.95286   AGTAAAAATAAAAAA          GACGGCCTCC ATGC GGAGACCGTC           CTATGATTAATTTGT 100 57
        bamA NONE
 C1O54_03395  770874 ..  770894 -  -5.3  -3.34398   TGGCTTGGCTAAATA            CGGATCCGC ATC ACGGCTCCA            TGGGAATCATCACCG  54 15
        metF NONE
 C1O54_03385  769042 ..  769074 -  -9.3  -3.76373   TCCTGAATACGGAAA     TCCGCATGCACTGT AAAAAA ACAG-ACATGCGGA      TGGAAAAAGCGTTCA  73 73
 C1O54_03380  768452 ..  768465 -  -2.3  -3.59315   TCAATGATCCGGAAA               GCGCC AGAC AACGC                ATGACCTGGGCGCTC  48 154
 C1O54_03330  756384 ..  756402 -  -8.8  -3.48593   GATCGCCGTAGACAA             CTCCCCCA GCA TGGTGGAG             CTGGGGCAGGAGCTG  66 520
 C1O54_03320 NONE
 C1O54_03315  753155 ..  753187 - -12.1  -5.79595   CGGGAAAACAAAAAA     GCCGTTCCGC-C-GG ACAGG CCTGCGCGGAACGGC     CGGGAAAAGAAAACC 100 50
 C1O54_03305  750468 ..  750485 -  -3.5  -2.87468   TCCGATCACAGCATA             TTTCATC ATGG GATAAAA              AAACAATCGGAACTG  45 165
 C1O54_03300  749158 ..  749179 -  -5.9  -4.58685   AAACTTTTTTAAAAA           CAGGCGGATT TAC AATCC-CCCG           TTCAAATACACCACA  73 57
 C1O54_03295  747763 ..  747773 -  -6.8  -5.00138   CATGCAAATGAAAAA                 CGTC ATT GACG                 ATCCTGCCTACAAGG  84 289
 C1O54_03285 NONE
 C1O54_03280  743986 ..  743996 -  -8.2  -3.28712   CTTGCCTCCGCAGAA                 GCGC TGT GCGC                 CGGGGCCTCTGTCGT  62 290
 C1O54_03255  738534 ..  738549 -  -2.4  -2.75891   ACAGTCATGGAATCA              GGAACG CTGC CGCACC               ATTTCATACAGGCAT  39 7
 C1O54_03250  737420 ..  737436 -  -7.9   -4.4448   AAACGGTGAAAGAAA              GTGCTCC GGC GGCGCAC              CCGCCAGAATGGAGT  77 265
 C1O54_03240  736780 ..  736801 -  -3.7  -5.26875   TTCCGAAGTAAAAAA           GAGAGGGATG AGC CATTCC-CTC           ATGAACCGTCCCCCC  82 62
 C1O54_03225 NONE
 C1O54_03220  732338 ..  732378 - -21.3   -4.0825   TCCGTAATCAAATAA  GCAACGCCGCATCCTCTAC CTG ATCGAGAATGCGGCGTTGC  CGCCAGGTCATGCAG 100 181
 C1O54_03215  731473 ..  731487 -  -6.4  -4.78107   CACGACCACGAAAAA               CAGGAT TAA ATCCCG               GCCCCGGTTATCCCA  78 118
 C1O54_03175 NONE
        cadA  721844 ..  721856 -  -2.7  -4.07568   GGCTCTCCTGCAAAA                TATCT CCA AGACA                CAGAATAACGCGGAA  56 230
 C1O54_03130 NONE
         lgt  709959 ..  709973 -  -7.1  -3.60234   GCAGATATTTTCAAA               GCTGG TCCCG CCAGC               AGTATTCCCAAAACA  60 64
 C1O54_03115 NONE
 C1O54_03110  706768 ..  706784 -  -6.5  -3.86795   AAAAAATCTAGTAAA              CCAGCTT GTT AAGCGGG              TATTCAATGATGCCT  67 1
 C1O54_03105  706529 ..  706558 - -12.9  -5.51046   CAAATACATAAAAAA       CGGCGTCCTTCCGT GAT AAGGA-GGACGCCG       GAATTTTCCGGAAAT 100 80
 C1O54_03100 NONE
 C1O54_03095  704948 ..  704970 -  -3.4   -4.0162   CGCTGATAGGATAAA           TTTTCAGCAG CAA CCACTGATAA           AAAATACAGAGAAAA  56 282
 C1O54_03090  702805 ..  702819 -  -7.8  -4.07568   TGGCCGCCGCCAAAA               CACAGG ACG CCTGCG               TCATCACCGTCACGG  71 464
        ilvD  699158 ..  699193 - -11.1  -3.83998   CGACGGCAGATGAAA    TCAGCCGCGATCCCC ATTAAG GAGGAAGGCGGCTGA     AATTTGGTTGGGATA  84 60
 C1O54_03060  695777 ..  695802 -  -3.4  -4.41177   CAGAGAAACGGAAAA         GTAATCGTCAA ACATA TCGACGAT-AC         TTCCGCTTACAATTT  64 414
 C1O54_03030  681212 ..  681230 -  -3.8  -3.14848   GCCTCCGATCAAAAG             CGAAATCC ATC GGGTTTCA             GATACCTGAGGAAGA  46 0
 C1O54_03025  680656 ..  680666 -  -3.2  -4.85599   CCCATCTCAGAAAAA                 CAGC GCG GCTA                 CTTCCTGCCCAGGGA  70 379
 C1O54_03015  678354 ..  678375 -  -3.7  -3.36515   CGCTACCGCGAAATA           TGACAGC-CG GAG CATGCCGTCA           ATGCTCCATCACAAC  50 93
 C1O54_03010  676084 ..  676104 -  -9.7  -3.53811   GCCATCTCCTTCAAA            GGAGACCAG ATT CTGGTTTCC            GGCAATTATACAAGC  70 373
 C1O54_03000  672575 ..  672606 - -17.4  -5.24129   GTCCGGGATAAAAAA      GGCTTCCAGCCCTT ACGA AAGGACCGGAAGCC       ATGATTATGTTGCGT 100 75
        rsmA NONE
 C1O54_02965  663611 ..  663622 -  -3.6  -2.96031   TTTATTGGAAATAAC                CGCC ACCC GGCA                 AGTTCCTGCTTCCAG  45 72
 C1O54_02960  663162 ..  663173 -    -3  -4.36914   TTTTTTGCCATAAAA                TTTC AAGT GAAA                 GAAAGGATTATGAAT  61 66
 C1O54_02940  658480 ..  658516 - -10.3  -3.90744   CTCCCCCTGAAACAA    GTAACCCCTTCCAAGCT GTT AACTTAAAAGGGGTTAT    ATGGTGCGCCCGAAA  82 27
 C1O54_02930 NONE
 C1O54_02925  654353 ..  654373 - -11.3  -3.05384   GTCCCTCTGATGGAA            CTGTAAAGA AAT TCTTTACAG            TTCCATCATATTGAA  74 213
 C1O54_02915 NONE
 C1O54_02910  651270 ..  651283 -  -4.5  -3.61715   CAGTTGCGGTAATAA               TGCCG GCTT CGACA                GCATTCGTGATGCTG  54 150
 C1O54_02880 NONE
 C1O54_02875  643316 ..  643353 - -22.9   -4.7261   ATTTACCAAAAGAAA   GCGGCTAGCTGGACGAA TAAG CTCATCCAGCTAGCCGC    TCATGGGGAGGGTCT 100 57
 C1O54_02870 NONE
 C1O54_02865 NONE
 C1O54_02860 NONE
 C1O54_02855 NONE
 C1O54_02850  638204 ..  638222 -  -8.8  -3.40611   CGGATGGGAAGAACA             GGGAATGG AGG CCATGCCC             GTCAGGACACGGACT  69 27
 C1O54_02845 NONE
 C1O54_02840  633799 ..  633833 - -13.8  -5.14965   ATGCTTATTAAAAAA    CAACCACTCAGAGGA TAACAG TCC-CTGAGTGGTTG     TAATTCGTAGAAAAT 100 343
 C1O54_02835 NONE
 C1O54_02830  632015 ..  632041 - -12.4  -5.48303   ATAATTTCAAAAAAA         CTCCTTCCAATA TGA TTTTGGAAGGAG         TTTTTAATAAAAATA 100 104
 C1O54_02825  630622 ..  630639 -  -3.5  -3.34398   GCGCTTTTTCAAATA             CTTCTTT ATCT AAAAAAG              TGATACACCTCAAAG  50 135
 C1O54_02820  630206 ..  630228 -    -2  -2.78679   TGGTTGTATGTAAAG           CTCTGACA GGCGTGG CGTCAGAA           TAGCCGATTCCCACA  39 20
 C1O54_02815  629550 ..  629586 - -16.2  -2.83639   AATTTTACGAATAAG    TATAATCTGCGCATTA AAAAA CAATGCGCAGATTATA    TCATTTTTATATAAC  91 274
 C1O54_02810  627839 ..  627863 -  -6.4  -5.09895   CATTTATGTAAAAAA          GTTCCTTCCG ATAAA CAGAAGGAGC          TTTTATAAAATTAAA  86 84
 C1O54_02805  626493 ..  626503 -  -5.4  -3.02371   TTGCTGAAATAATCA                 TCCA CAC TGGA                 CATACAAAAAAGAGA  49 506
 C1O54_02800 NONE
 C1O54_02795  625396 ..  625421 - -12.6  -4.96848   CCGTTTACACAAAAA         CTGCACCCGG AACATA CCGGATGCAG          CTTGAATCCCATACA 100 268
        kdpF NONE
 C1O54_02785 NONE
        kdpB  621058 ..  621068 -  -4.6  -4.37763   TCAGTTAAAAAAACA                 GGCC GAC GACC                 ATATCAATCAGTTTG  66 4
 C1O54_02775  620333 ..  620372 -   -13  -3.81137   CTTTAAAGATGTAAA  TCAATTGCGGGCGTTCCCA TGA CGTGAA-GCCCGCAATCGA  TTTCATTTTTTCAAG  87 96
 C1O54_02760  617697 ..  617718 -  -2.3  -2.77344   TCACTTTTCAAGAAT           GCAG-TTCCC TAG GGAAATCTAC           CAATTCGGCCGGAAT  39 104
 C1O54_02755  617383 ..  617409 - -17.3  -4.14739   TTATTGATGGGAAAA         CGCTGCCGGGC TGCAG GCCCGGCAGCA         GATAAGATGGCGGCG 100 42
 C1O54_02750 NONE
 C1O54_02745 NONE
 C1O54_02740  613360 ..  613378 -  -3.8  -4.64861   GGCTCGGAAAACAAA             GATGCACC AGG AACGCATC             TGACACTCCGCCTGC  68 146
 C1O54_02725  611440 ..  611456 -  -6.5  -2.81966   GGAAATTTCAGCACA              GGCGG GCGATAT CCGCC              ATCAATTCCCGCACG  53 1
 C1O54_02720  609601 ..  609630 -    -5  -4.64861   TCTCCGGAAAAGAAA       GCTCCCATACAC AAAACG GTATCTGGGAAC        ACCTGCAGCCGGGAA  73 403
 C1O54_02680  598213 ..  598228 -    -9  -3.28712   CCGGCTTTGGCAGAA              GACGCT AAAA AGCGTC               CCGCAAGTATCGGGA  67 67
 C1O54_02675 NONE
 C1O54_02670  596807 ..  596822 -  -2.6  -3.88766   AGCCCAGAGAGGAAA              GGTA-GT CGG ACATACC              AAAAATGTTAGAACA  53 101
 C1O54_02665  595954 ..  595987 -  -5.1  -4.43477   GGCATTGAAGGAAAA     GGCCATGGGACCGAA CATG CTCCGCGCCAAGGCC      TTTGAAAACATGCTG  70 174
 C1O54_02655 NONE
 C1O54_02650 NONE
 C1O54_02645  593065 ..  593093 - -16.3  -3.33696   TCCTTCTTTAAGTAA        TTCATCCAAACAT CCA ATGTTTGGATGAA        TGCCAACATATCCAT 100 65
 C1O54_02640  592006 ..  592044 - -20.3  -3.03903   AAAAGCCCGGGAATA   TCCGTGCCGTTCCGCCG CATTC CGGCGGAACGGCACGCG   TTCCAGATAAAAGAA 100 44
 C1O54_02635  591166 ..  591176 -  -2.6  -4.72272   CTGCTTCATGAAAAA                 TTAT CGG ATAA                 CGGTCCAGAGACGCC  65 15
 C1O54_02630  590425 ..  590452 -  -3.4  -6.09196   CCGAAAAGAAAAAAA        TGCCGATTCCGCA TGA TG-GGAATCGCCT        GTTCCGTTAATTTAA 100 37
 C1O54_02625  588211 ..  588244 -  -6.1  -4.58663   ACCACTTTTCAAAAA     CAGGAAAAAAAGGAC GTCG GTCTTTCTCTTCCTA      CACAATCCGGCTTCA  73 192
 C1O54_02620  587400 ..  587412 -  -5.5  -3.53012   CTTCGTTTCCGCAAA                CCAGA TCC TCCGG                CGTTCCATGACTTTG  56 64
 C1O54_02615  585750 ..  585764 -  -2.7  -3.32997   CCGGGATAAAGGCAA               CCTGG CCCTT CCCGG               AGAGCACATTCTCCG  46 184
 C1O54_02600  582401 ..  582437 - -16.6  -4.42806   CCACCCGGAAAGAAA    TACACAGGCCGCGGTG TTTTG CACCGCGGCCTGGACA    TCTGTCTGAAAACGC 100 45
 C1O54_02595 NONE
 C1O54_02590  579158 ..  579180 - -16.3  -3.78934   TCTCTTTTATAAGAA           CCGCTCCGG ATCTG CCGGAGCGG           TTTTTTTATTACACA 100 288
 C1O54_02575  576896 ..  576927 - -14.6  -2.71681   CAACGCCCCCAACCA      CGGAACGCTGAAAA CGTC CTTTCAGCATTCCG       CAGTACGGGAAAACA  82 59
        ispE  571642 ..  571678 -  -3.6  -2.74782   ACAAACTCTTAATCA    TGGACGGAGTGTAACG GCATG CATCCCCCTCCGTCAA    GGCAAGGCCTCCTGC  44 53
 C1O54_02545 NONE
 C1O54_02540  569040 ..  569052 -  -7.7  -3.30701   CGGCAGGAAAGGCAA                CGGAA CAA TTCCG                GGGCATTCTGAAAAA  61 44
 C1O54_02520  565567 ..  565587 -    -9  -2.54896   TGTCCAGGGAATGCA           GCTCCTGCC GGAC GGCAGG-GC            CGTTTCCATCAACAT  58 253
        purH  561074 ..  561084 -  -2.4  -3.80516   AATTAATGGAGGAAA                 TGGC GGT GCCC                 CGTAAATACCATGGC  50 2
 C1O54_02490  560284 ..  560306 -    -7  -2.72855   GAAACGGCGCAATCA          GCTCAGGCG GTCGAT CGCCTG-GC           GCATTTCCCTCACGG  53 0
        acpS  559553 ..  559570 -  -7.7  -2.57931   GTTACTCTTGATAAT             GGTACTG CTGC CAGCACC              GCAACCGTTTCTATC  53 315
 C1O54_02470 NONE
 C1O54_02465  553876 ..  553888 -  -7.7  -3.28791   ATGCGCCTCTTACAA                GCTGA CCG TCAGC                AAACGGTAGAAAAAC  61 45
 C1O54_02460  553266 ..  553295 - -16.5  -5.00616   CCCTTCCTGAAAAAA       TAAGGCCGCCTTC TTCA GGAGGCGGCCTTA        CCAGTCAAAGGTCTT 100 57
 C1O54_02440  546905 ..  546919 -   -10  -5.00895   GGCATCAGACAAAAA               GTTCCG GGC CGGAAC               CATCCGCTTTGTTCT 100 350
 C1O54_02425  544540 ..  544557 -  -2.7  -3.73072   AATTGCTGGACCAAA             TGGAATC TTGC GATTTCA              TTTGCGCCATGCTTC  52 133
 C1O54_02420 NONE
 C1O54_02415 NONE
 C1O54_02410  542582 ..  542601 - -10.8  -2.71924   CACTTTGTTGGAAAG            CGATTGCT TCTC AGCAATCG             TTTTCTTTGCCACGC  69 80
 C1O54_02405  539571 ..  539587 -  -2.3  -2.95942   TGCACAGGTAAATGA              GACAA GAGCAAG TTGTC              ATTCACGACGGGGAG  41 50
         rrf  539217 ..  539256 - -16.4  -4.72497   GACCGAGCAAGAAAA  GAACAGGCCCCGCGAGTC AAGT GACTGGCGGGGCCTGATG   GGAAAAAATCCCGGC 100 34
 C1O54_02395 NONE
 C1O54_02390  536440 ..  536455 - -11.8   -4.3255   CTTTCAAGGAAGAAA              GGGGGG AAAT CCCCCC               CTTCTTCCTTTTTTC  95 134
        pyrF  532730 ..  532749 -  -4.3  -3.28712   CCCTCCCTTTGACAA            GCTCATG CACAGC CATAAGC             AGGCCGTTATCATTT  50 69
 C1O54_02365 NONE
 C1O54_02360  530122 ..  530132 -  -8.2  -2.62735   ATACCCCTTACAGCA                 CGGC AAC GCCG                 TTCCTCCTCAGGAAA  58 75
 C1O54_02340 NONE
 C1O54_02335  524590 ..  524628 -   -14  -4.56775   ATTTCCTTTTAAAAA   GTTGAACCCCATTATGCC GGA GACACAACGGGGTTCAAG   GAAAATACGTGGCAA 100 47
 C1O54_02330  524156 ..  524185 - -19.5  -4.18018   TCTTCCTATCGAAAA       TAAGAGCCTCGTC TTCC GACGAGGCTCTTA        CTGAAAAACTGGCGG 100 35
 C1O54_02310  520614 ..  520627 -  -2.3  -2.60685   CAATTAGAGAGTAAT               GGCAG TGGG CTGCT                GGGCTTCATGCGGAT  39 0
 C1O54_02305  520119 ..  520142 - -13.2   -5.4505   TCCTGCAACAAAAAA          GGAGCACTCC ACAG GGAGTACTCC           TTTTCCGAGAAAGAA 100 75
 C1O54_02290 NONE
 C1O54_02285  516558 ..  516570 -  -3.4  -3.14792   TTAATGGAAAAGAAC                GCTT TCATG AAGC                CTGGGAATTGGAAAC  44 17
 C1O54_02280 NONE
 C1O54_02275 NONE
 C1O54_02270 NONE
 C1O54_02265 NONE
 C1O54_02260  510800 ..  510810 -  -8.2  -4.67353   TTATGCAGCCAAAAA                 CGGC TTT GCCG                 CCAGGGAACGGTTAA  86 202
 C1O54_02210  492170 ..  492199 - -14.9  -5.00884   AGGTCTCTGAAAAAA       TGGGGGCCTCCGC ACCC GCGGAGGCCCCTG        CCTTACCCCAAACAA 100 64
 C1O54_02205  491453 ..  491471 -  -6.1  -4.56597   TTCCCCCGCCAAAAA             GAAAAAG TCGGG CTTTTTC             CAAAAGATGATGGAG  75 108
 C1O54_02170 NONE
 C1O54_02165  482244 ..  482280 -  -7.9   -5.0925   CGGCAAAAGGAAAAA    CCCCGCGGAAGAACATC AAT GACGCCCTTCCGTGGAT    AAACAGAAGGTCCTT  91 39
 C1O54_02105  471527 ..  471552 - -11.1  -4.58395   TGCATTTTTCAAAAA         GCCGTCCCCCA AAAA TGCGGAACGGC          TCTTCTGATTCGGAA  95 188
 C1O54_02050  459515 ..  459536 -  -2.9  -3.63744   CTTTCTTTGAAAAGA           GGACTCCTT TTTA ACGGATTCC            GTTCATATCACAAGA  49 115
 C1O54_02045  458609 ..  458632 -   -16  -5.71295   AGATAAAAACAAAAA          GGCCGCTCCC TCCC GGGAACGGCC           CTGACTTGAACTATT 100 47
 C1O54_02040  449201 ..  449235 - -27.4  -3.05384   GCTTTCCTCAGGCAA     CAGAGCCGTTCCGGAA TTA TTCCGGAACGGCTCTG     GAGGGCCAGGAGGAA 100 89
 C1O54_02035  448919 ..  448932 -  -3.7  -3.93236   GACTAATGTTATAAA               CCGCG TGCG CGCGC                GTAGGGCCTAGCCTT  57 74
        gyrB NONE
 C1O54_02025  443620 ..  443654 - -12.8  -3.16323   AAAACGGCCCATGAA     GCCCCCTGCTCCGGCA TGA CGCCGGAGCAGGAAAA     CCTGAATATTATTCT  79 34
 C1O54_02020  442923 ..  442939 -  -7.9   -3.6682   CGCCAGGGATTCAAA              CGACCCC GCC GGGGCCA              TGATTTCTATCCGGT  67 57
 C1O54_02010 NONE
 C1O54_02005 NONE
 C1O54_02000  434769 ..  434784 -  -3.3  -2.92157   TATTAAGGCGATAGA              TCATG CGCTTT CATGA               TACCATTTCCGTGCA  42 93
 C1O54_01995  434251 ..  434283 - -13.5  -3.70401   ATAAAAGCATAAACA      CCCGGAGCCGT TTTTGCCGCGG ACGGCTCCGGG      GCAAATCCTGCTATC  90 131
        pstB NONE
 C1O54_01920  416431 ..  416449 -  -2.3   -5.7946   TTCCGAACAAAAAAA             CGGCACT TCAAC AGCGCCC             GCTGCGGGCTTTCCT  89 57
 C1O54_01900  411608 ..  411647 -  -5.8  -5.60993   CCTTCCACAAAAAAA  CCTTTTCCTGCCGGCATTT GGA AAAAGCCGG-AAAAACAGG  CAGCAGGACAAGGAG 100 150
 C1O54_01895 NONE
 C1O54_01890 NONE
 C1O54_01885  409168 ..  409180 -  -3.3  -4.00476   GAAATTTACCAGAAA                GGCAG CCG CTGCT                ACTGGGAAAAACTGG  56 236
 C1O54_01830  400912 ..  400936 -  -2.7  -3.54424   CCGGATTGCCGCAAA          CTGCGGGGA ACGGGCA TCCGCGCGG          CAGGCCTTCCCCGCC  49 40
 C1O54_01825 NONE
 C1O54_01820  398585 ..  398603 -  -8.8  -3.06183   GTCATCCCCATTGAA             CGCAGCAG CGC CTACCGCG             GATTGTACCACTGCC  63 483
 C1O54_01790  393011 ..  393025 - -11.4  -2.65894   GACAAGACGGAGAAT               TCCCCG TCA CGGGGA               TTATTCCTTTCCTCG  70 26
 C1O54_01785  391538 ..  391564 - -13.8  -5.72254   GGAAATAATAAAAAA         CTCCCTTCCG TTAATCG CGGAAGGGAG         CTGAATGGAAACAGG 100 56
 C1O54_01780 NONE
 C1O54_01775  389774 ..  389789 -  -4.6  -3.53012   GTTCCTCTCCGGAAA              GAGCTG AGTA CTGCTC               CAGGATAGAGGAGTT  54 75
 C1O54_01770  388778 ..  388801 -   -16  -5.24129   GCGTTGCACAAAAAA          CCGCCCCGGA CAAA TCCGGGACGG           TAAACACCAGCATGA 100 53
 C1O54_01765 NONE
 C1O54_01760 NONE
 C1O54_01755  387149 ..  387174 -   -14  -4.06502   CACCTCTAAATCAAA         CCCCCCGGAG TGGCTG CTCCGAGGGG          TTTTTCCTTTAGTTG 100 222
 C1O54_01750 NONE
 C1O54_01745 NONE
 C1O54_01740  385613 ..  385628 -    -9  -3.34715   CAGGCTTGTTAAACA              GAGCGT CCAA ACGCTC               CAAATCAGCATGATC  69 145
 C1O54_01735  383440 ..  383454 -  -3.4  -3.65902   TTCATGTCAGCTAAA               GAGGGC AAC GCCGCC               TTTCTCGGCCTTTTC  52 2
 C1O54_01730 NONE
 C1O54_01725 NONE
 C1O54_01720  380452 ..  380467 -  -3.4  -3.15663   ATTCATTTTTATTAA              TTTATT GGTG AATAAA               TTTTGGAAGTCACAA  44 6
 C1O54_01715  379670 ..  379683 -  -6.7  -4.25283   ACGTTTTGAGGAAAA               CCAGA TGAT TCTGG                ATCTGTTCAAAGCCT  71 32
 C1O54_01705 NONE
 C1O54_01700  378323 ..  378355 -  -4.6   -2.7127   AATAAATGAATGAAC      GGGATCGCCCCGCG GAGGG CGCTGGACATGCCC      AGGATGCGCGTTGCC  44 42
 C1O54_01695 NONE
 C1O54_01690  376444 ..  376473 -  -7.1  -4.21811   CACTGAACACAGAAA       CGCCCCG-GACG AGCAAAA CGTTGCGGGGCG       TTTTCTTTTGGGCGA  71 61
 C1O54_01670  373801 ..  373812 -  -2.2  -3.23235   CAGAGAGGAATTTAA                CATG GTAA CACG                 GTACTATCGTAACCT  44 10
 C1O54_01665  371558 ..  371580 - -12.8   -5.4505   TTTTCTAATAAAAAA           GCCTCTTTCA CCA CGAAAGAGGC           CTAAACGTTTCAGAA 100 56
 C1O54_01660  371072 ..  371089 -  -2.7  -3.73072   AATTGCTGGACCAAA             TGGAATC TTGC GATTTCA              TTTGCGCCATGCTTC  52 133
 C1O54_01655 NONE
 C1O54_01650 NONE
 C1O54_01645  369114 ..  369133 - -10.8  -2.71924   CACTTTGTTGGAAAG            CGATTGCT TCTC AGCAATCG             TTTTCTTTGCCACGC  69 80
 C1O54_01640  366103 ..  366119 -  -2.3  -2.95942   TGCACAGGTAAATGA              GACAA GAGCAAG TTGTC              ATTCACGACGGGGAG  41 50
         rrf  365749 ..  365788 - -16.4  -4.72497   GACCGAGCAAGAAAA  GAACAGGCCCCGCGAGTC AAGT GACTGGCGGGGCCTGATG   GGAAAAAATCCCGGC 100 34
 C1O54_01630  364861 ..  364880 -    -5  -2.81905   AGAATACAGAAATAT            GGCACGCCT GTC AGGCAT-CC            TGAAATACCATTCGT  48 16
 C1O54_01625 NONE
 C1O54_01620  363116 ..  363153 - -17.9   -5.1861   TTCATCAGCAAAAAA   CATCGTGGCCGTTCC GGAAAAGA AGAACGGCCACGATG    CCGAAAAAGTTATAA 100 35
        folK NONE
        panB NONE
 C1O54_01605 NONE
 C1O54_01600  359866 ..  359878 -  -4.8  -2.99458   CACCAGAAAACAGGA                GGAG CTGGT CTCC                AAAAATCAAAACTCC  47 65
 C1O54_01585  356948 ..  356974 - -11.6  -5.24129   CTCCTCCACAAAAAA         GCCCCGTTCATA TTT CATGAACGGGGA         TGAGTCAAATGAAGT 100 64
 C1O54_01575  355932 ..  355944 -  -4.1  -4.65263   AGTCCGGAAAAGAAA                CCATC AGA AATGG                AAATGAATTCCACAA  68 50
 C1O54_01565 NONE
 C1O54_01560  353258 ..  353285 -   -20  -6.02345   GAATGAGAAAAAAAA        CCGCCGCGAATA TGAT TATTCGCGGCGG         TCAAATTAATCAGCG 100 57
 C1O54_01555  352469 ..  352481 -  -3.3  -4.24204   TACCTAGACGGAAAA                GGGCA AAA TGCCG                TTTCTCCCAGTCATC  59 322
 C1O54_01550  351311 ..  351330 -  -6.4  -5.88565   GCCATAAGAAAAAAA            CATCAGCG TTCA CGCTTATG             GCCGCGCAGCATGGC 100 8
 C1O54_01545  350559 ..  350576 -  -5.6  -4.19177   ACTTGGCAAGAGAAA             TTTGGC GCAATA GCCAAA              TATATCACTCTGTGG  66 30
 C1O54_01540  350204 ..  350232 - -10.3   -5.4505   TGCCGGAAGAAAAAA        GCCTCTCGGTT CATAGAC ATCCGAGAGGC        TTCCTGTATTAGGAA 100 97
 C1O54_01535  349119 ..  349138 -  -4.3  -4.32034   CCACGACGATGAAAA            TCTCCGTG GCGGT CACGG-GA            ACGGAAGCTGGAATC  65 268
 C1O54_01525  347183 ..  347195 -  -3.4  -3.32832   TCCAAAAATAGCTAA                CATG TTCAT CATG                GAGTACTACAGTATT  46 82
 C1O54_01520  346841 ..  346871 - -13.4  -4.18018   GCCTTTCAGCTAAAA       TGAACAGGACAGAA AAT TCCCGCCCTGTTCA       TAATGCCGTTAAATT 100 49
 C1O54_01515 NONE
 C1O54_01510  344950 ..  344962 -  -9.1  -2.53392   AAAGCCCCGAATGCA                TGCGG ATA CCGCA                GAAATTCTATATTCC  61 47
 C1O54_01505  344465 ..  344478 -  -2.3  -2.56164   GCGGGAATCAGGAAC               GATGG GCGG CCTTC                CACTCGTCAGCCTTG  39 4
 C1O54_01500  343603 ..  343631 - -20.4  -3.05384   GTCCCTCTTACGCAA        CGGCCGCCTTTC TTTGG GAAAGGCGGCCG        TTCTTTTTGAAACCG 100 72
 C1O54_01490  340553 ..  340583 - -17.6  -5.00616   CCCTTCCCTAAAAAA       CGCCCCGGTCTCCC TCC AGGAAACCGGGGCA       TCCATAATCACATGG 100 57
 C1O54_01480  338103 ..  338118 -  -2.6  -4.23434   CAAAACATTCCAAAA              CCTTTT CCGC AAAAGA               TCGCACGTCCTCTTC  57 297
 C1O54_01470  337039 ..  337057 -  -2.5  -3.71848   CCTCTTCAGGAACAA             TTTTCCT TCATC AAGAAAA             TGCTGTCATGGAAAC  51 323
 C1O54_01460  336586 ..  336607 -  -4.3  -3.28791   ATTCCCCCGCGACAA           GCACCACCC ATGA AGATGGAGC            CACTGGTCGGAATTG  50 20
 C1O54_01455  336478 ..  336498 -  -3.2  -3.71848   TCCTTGCAGGAACAA           CCG-GATGG TACC CCGTCACGG            GCTCGAACCGTGGAC  52 10
 C1O54_01450  336333 ..  336358 - -10.5  -5.09762   TTGCAATAAATAAAA         TCCGGCTTTGCC ATC AGCA-AGCCGGA         CTAGAAAAGAAATGG 100 38
 C1O54_01445  333535 ..  333545 -  -4.6  -3.08327   AGCAAACGGCCAACA                 GGGA CAT CCCC                 GGAAAAACAAGCTTC  48 303
 C1O54_01440  332297 ..  332313 -  -4.4  -3.88137   AGAAGTGGGCAGAAA              GCCTCA GAACT TGAAGC              GGACAGCCCCGAAGA  59 12
 C1O54_01430  330143 ..  330157 -    -7  -4.08767   GCCAGGCGTTCAAAA               GGGACG GCG CGGCCC               TCCGGCAGATAGGGA  69 222
        thiD  328840 ..  328859 -  -7.2  -4.15106   TACTAATTCTTAAAA            GCTCCATGT AGC ACATGG-GC            GTGGATACAACTACC  74 155
 C1O54_01405  326778 ..  326798 - -12.5  -4.29432   GAAACTTCAGGAAAA            GGAGCAGGG AGC CCCCGCCCC            CGCGAAGCAGGCCGA 100 91
 C1O54_01385  318693 ..  318717 - -11.4   -4.4784   GAAAGGTTAAATAAA          TCAGCCGGCC CACAC GGCCGGCCAA          AGCCGGAACGGCGTT  95 109
 C1O54_01375  314891 ..  314917 - -17.3  -4.24183   TATAAGAAATAATAA         GGCCGCCGCCT TTGTC AGGCAGCGGCC         TGTGAATTGACCAGT 100 58
 C1O54_01370  312893 ..  312924 -  -5.1   -4.8622   GGGGGCAATGAAAAA      CTCCTGAACTGGC TTACCG GCCAGGTCATGAA       GGCCGCCAAAGGCAA  80 150
 C1O54_01355  309292 ..  309328 - -16.6  -4.64861   TTTTTTCAAAACAAA    TCCGCCCATGCCGC GGGAACGTG GCGGCATGGGCGGG    AAAAAGCGGGTTCCG 100 56
        rfbB NONE
        rfbA  307232 ..  307243 -  -3.6  -3.90112   TCGCCGGGAAGCAAA                CCGC CCCC ACGG                 AAAACCGCGGGATTT  58 84
 C1O54_01295  297393 ..  297409 -  -3.7  -4.12198   CATAATCCCCTAAAA              GGCAA TCCAAAT TTGCC              GTACGTCCTTAATTT  59 39
        rplS  296915 ..  296941 - -17.3  -5.72622   TCCAGAAATAAAAAA        CCCGGCGCCGCC TCAC GGCGG-GCCGGG         CCAGCAAAATAGCAA 100 50
 C1O54_01220  279771 ..  279794 -  -2.5  -4.55004   AATACAAAATATAAA          TATGCTAAA TATATT TTTAGCAAA           TGCCAAATGCAATCA  62 270
 C1O54_01175 NONE
 C1O54_01170  266799 ..  266818 -  -3.4  -2.78384   CGCCTTTTTATCACA            TTTGGCCG GAAG CGGCCGCA             TAAGCCTCCATCTCA  41 1
 C1O54_01165  265960 ..  265973 -  -2.3  -3.36968   GATTCAATGGCAGAA               CCCCC GTTC GGAAG                TTTCCACGAATTGGA  46 0
 C1O54_01160  264906 ..  264918 -  -9.1  -3.01712   CCTCTCTGGGCAAGA                GCCTG AAC CAGGC                GGTAGCCCAGTACAA  63 349
 C1O54_01145 NONE
 C1O54_01140  258524 ..  258539 - -10.4  -4.88736   GATTATTCAGAAAAA              CGGGCA TTTC TGCCCG               TTTTTTATTTCTCGT 100 306
 C1O54_01125  250092 ..  250122 - -16.9  -4.54047   CTACCGGACACAAAA       GCGCCGCTTTCCC GGAAA GGGAAAGCGGCGT       GAAACGGAATGGAAA 100 54
 C1O54_01095  243586 ..  243609 -   -11  -2.62522   TCAGTGAAGACGAAC          GTTCCGCTCC CGCA GGAGGGGAAC           TCGGCTGGATAAACC  67 366
 C1O54_01040 NONE
 C1O54_01035 NONE
 C1O54_01030  228822 ..  228857 - -16.4  -4.87892   TGGCAAGAAAATAAA    TTTCCCCCGTCCAC-AT TAC ATGGTAGACGGGGGAAA    GAAATCAGCAATATT 100 40
 C1O54_01025  228205 ..  228221 -  -6.5  -4.46757   AACATACGCAGAAAA              CGCGG TTTTCCT CCGCG              CTGCCCCGGTTCAAA  76 36
        ftsA NONE
 C1O54_01015 NONE
 C1O54_01010 NONE
 C1O54_01005  222975 ..  222987 -  -2.7  -3.64755   ACAGACGGTTAACAA                CATTA TTT TAACG                AACGGATTCATGATG  49 20
 C1O54_01000  221783 ..  221810 -  -3.4  -4.57341   AATCCCGGGTAAAAA        CCCTGCAATACCG CTC CGGCATTAC-GGC        CTACTATATCCTGAC  67 287
 C1O54_00985  218283 ..  218311 - -18.2  -5.08255   AGGGGGAAAACAAAA        CCCCGCAACGGC AGAAA ACCGTTGCGGGG        CCGTTTTCCCAAATC 100 65
 C1O54_00980 NONE
 C1O54_00975 NONE
 C1O54_00970  214356 ..  214368 -  -5.5  -3.02902   TACTTAAAAACATCA                GTCCC TGG AGGAC                TTGGGATCCAGGGCG  51 10
 C1O54_00965  213938 ..  213951 -  -3.7  -3.08813   CTTCATGGTAAGACA               GCCCG GCGA CGGGA                ATGCGAACGGAAAAA  46 46
 C1O54_00960  213633 ..  213659 -  -2.2  -2.62184   GCCTGTTCCATATCA         CAAGAATGATAC CCG GCCTCCTTCCTG         CTGCGGAAGCTCCCC  39 48
 C1O54_00955 NONE
 C1O54_00950  212220 ..  212233 -  -3.7   -4.0964   AAGAAAAAAGGTAAA               TGCCG CCTC CGGCG                TTCTATTTGAAACGC  59 28
 C1O54_00945  211059 ..  211071 -  -6.3  -3.07344   TCATCCCGGAAGACA                TGGAA TCC TTCCA                GCGGTTTTTGACCCA  53 174
 C1O54_00935  209175 ..  209211 -  -9.5  -3.02144   GCAGCCCCGTCAATA   CCGCGC-TCATGGAGG AAATGG CCTCCATCACACGCGG    GCGCATGGTAAAAGC  65 254
 C1O54_00905  202625 ..  202671 -   -10  -3.53012   CCGTTTTTCCTGAAA CCGCCGGGGCAAAAGATCGGAC GGC GCCCAGTCATTTACCCTGCCGG ATTTTCCGGATAACC  74 10
 C1O54_00900  202108 ..  202139 - -15.2  -3.74693   CCGGATGCCATGAAA      GAGCCTCCGTGCAA ACAT CCGCACGGAAGCTC       TTTCATTAACAGGAT  95 40
 C1O54_00870  195551 ..  195574 - -13.9  -5.36441   CCCGCACATAAAAAA          CCGGAGGGA TTATTT TCCCTCCGG           TTTTCGGATACGGCC 100 52
 C1O54_00860  192844 ..  192854 -  -2.4  -4.57482   CCAGCCATAAAGAAA                 CCGG AAG CAGG                 GAATACCCCCCGGAG  62 325
 C1O54_00825 NONE
 C1O54_00820 NONE
 C1O54_00815  183174 ..  183186 -  -5.5  -4.11692   CATCTATCCGGAAAA                GCAGA AAA CCTGC                ACCGCACTGATGACT  63 60
 C1O54_00810  182363 ..  182397 -    -4  -4.90079   ACGGGAAGAAGAAAA     CGCCGGAGTTCCGGAA CCG TTCCGGGGAACCGGCC     CGGCATCCTTGTCAT  72 37
 C1O54_00805 NONE
 C1O54_00800 NONE
 C1O54_00795 NONE
 C1O54_00790 NONE
        tsaA  178001 ..  178014 -  -5.3  -4.30995   TCGGCCATAAAACAA               TGAAG CATG CTTCA                AAAATGTACCGATAG  69 299
 C1O54_00775  177537 ..  177549 -  -2.6  -3.55071   TCATATTTTTCCAAA                CCCG TTCCC CGGA                AAAAAGCACGGGCTT  47 44
 C1O54_00770  175844 ..  175854 -  -6.8   -3.0263   AGCACCTGGTCAATA                 TCCG TAT CGGA                 ACCCGGTTCAAAAAT  54 320
 C1O54_00760  171183 ..  171203 -  -9.7  -2.91593   TACGCGCCCAGAAAG            CCGCAGC GGAACAA GCTGCGG            AAACTTACCGCAAAA  65 516
 C1O54_00715 NONE
        rpmG  161733 ..  161744 -  -2.2  -4.02532   TAATAATAAAGATAA                TCGA TAAG CCGA                 ACCAGTTAACGCATT  55 31
        rpsR  161396 ..  161428 - -16.3  -4.86731   TGGGTGGAAATAAAA      CGGGAGTCTGCCCTG TTA CCGGACAAACTCCCG      CCTGCAAAGACAATT 100 70
 C1O54_00700  160554 ..  160564 -  -6.8  -3.86897   GTTATCGTTCATAAA                 TCCG GCG CGGA                 AATGGTTCAGGAACG  67 32
 C1O54_00695 NONE
 C1O54_00690 NONE
 C1O54_00685  157671 ..  157704 -  -5.1  -4.51174   CTACCACAAGCAAAA     CCGGGCGGCGCATCA AACG CGATGCTTCAACCGG      GCAGTTTATGAGCGA  70 124
 C1O54_00640 NONE
 C1O54_00635 NONE
 C1O54_00630  148639 ..  148665 - -17.4  -5.24129   CTCCTCCACAAAAAA         GCCCCGTTCATA TTT CATGAACGGGGC         CGTATCAATTTTTCA 100 44
 C1O54_00600  138906 ..  138917 -  -7.2  -3.65351   GCACCCCCACGGAAA                CCGC CGAG GCGG                 AGCCCTTCTGGTGTC  63 281
 C1O54_00590  137025 ..  137036 -    -3  -4.83615   CATGCGCTATAAAAA                GAAA GGCA TTTC                 CCCACTTCCGGCCCC  70 108
 C1O54_00580  135515 ..  135545 -  -4.6  -2.67423   GGGAAGAAGACGAAG       GTCCCTCCAAAGCC GCC GATTTTGTGGGGAC       ACACGTTTCTTCTGA  43 349
 C1O54_00565  133039 ..  133053 -  -5.7  -3.19602   TGGTTTAGATTAAGA               TGAGG TCTTC CCTCA               GGCAAGAAGCAAAAT  55 248
 C1O54_00560 NONE
 C1O54_00555  129445 ..  129473 - -15.3  -4.05714   ATGGTTAATGATAAA        GGCCTCTGCACGC AAT GCATGTAGAGGCC        GGAAAATGGCGGATA 100 320
 C1O54_00550  128797 ..  128849 - -15.5  -4.54449   ATATGGCAGATAAAA CAAGACTCCGTTGCCGGAGCCCTCC ATG GAAAGGCTCCGGCAACAGGGATATG CAGATGTTTACCGCA 100 33
 C1O54_00545 NONE
 C1O54_00540 NONE
 C1O54_00535  126727 ..  126757 - -12.6  -4.55798   GAGTTGAAACGAAAA       CACCCGCTCCCC TGCGAAT GGGAAACGGGTG       TTGAGGAATGAAGTC 100 357
 C1O54_00530  125429 ..  125454 -  -7.5  -4.15044   TGTTTCTTCAACAAA         GGCAGAACCAC AGAA GCAGCCCTGCC          ATTATCAAGCCGAAG  74 386
 C1O54_00520 NONE
 C1O54_00515  119951 ..  119967 -  -2.2  -2.83309   GAGAAGTATTTAAAT             CAGG-CG GATG CGTCCCG              TCAGCAGTTCCTGCA  39 3
 C1O54_00510 NONE
 C1O54_00505  115996 ..  116006 -    -4  -3.78934   TCCGGTTCAGAACAA                 TGAA TCT TTCA                 AATTAACGAGGTAAA  54 94
 C1O54_00490  113488 ..  113502 -  -3.5  -2.95307   GAACACAGAGGAAAG               CGGCT ATCAA AGCCA               TGAGGGAGATGCAAA  45 47
 C1O54_00485 NONE
 C1O54_00480 NONE
 C1O54_00475  110650 ..  110670 -  -2.5  -3.75678   TTCCTAAACAAAAAC            TCCTGTCTA TTT TAGTTAGGA            TTACATTTTTTCTCC  50 16
 C1O54_00470  108131 ..  108144 -  -2.3  -3.99374   CTTGAGCAAGAAGAA               CGGGA GCCT TCCCT                CCTTCCTCCTGTGAT  55 464
 C1O54_00465  105823 ..  105835 -  -5.5  -2.81966   GTAAAGGTTATCAGA                GACAG CAC CTGCC                CATGAATGATGAGCT  48 209
 C1O54_00460  105162 ..  105181 -    -3  -2.97925   ATTTTATATCATACA            TTTTTAAT TTTT ATCAAAAA             AATATGATATAATTA  42 270
 C1O54_00390   92668 ..   92695 - -12.8  -2.57132   CTCCGTCCGCAGAAT        CGGGAAGGGAAA GAAC TTTCCCTTCCCC         TCCATATTCGAAAAG  76 58
 C1O54_00385   92078 ..   92124 -  -9.5  -2.57294   AAGAGCCATATGAAT CCGTTCCTGTGCCGTTTCCTGAC CGA GTCAGGAAACGG--CATGCCCGG CGCCCCGCGGAATCC  65 66
 C1O54_00340   78861 ..   78886 - -16.2  -5.07652   CCTTTCAAAATAAAA         CTCCGTCCGG AACGTA CCGGACGGAG          TAAGATGCCAGCGGC 100 52
        recJ   76776 ..   76801 - -11.9  -3.16071   GCGCATATCAAGATA         TCTTCTCGGAC TACC GTCCGAGAAGC          AGCAATAGACGACCT  77 209
 C1O54_00330 NONE
 C1O54_00325   76064 ..   76092 -  -7.3  -2.64218   ACCGCCCAGGACAAC        GCCATCGGGAAGG CAT CCTTCCCTTTGCC        TTAAATGGAGACCAC  55 26
 C1O54_00320   75344 ..   75357 -  -3.9  -4.09108   TTCAACTCACACAAA               TTCAA TGTA TTGAA                TGACATAAAGTAAAA  59 134
 C1O54_00315   75049 ..   75059 -  -5.4  -3.53855   TTCTTGAAAAATATA                 GAGA TCA TCTC                 CTATTAGGGTTAGAC  56 19
 C1O54_00265   63135 ..   63146 -  -5.8  -3.64703   GCCTTTTCACCCAAA                GGCA CCAA TGCC                 AACTTCGCCAGAATC  58 336
 C1O54_00230   56069 ..   56080 -  -7.2  -3.48276   GTCGCGGCCACACAA                CCGC CTGA GCGG                 GAAACGCCTTTCCCT  62 39
 C1O54_00225   55502 ..   55524 -    -4  -5.28176   TTCAGCCATAAAAAA           CAGCCTTCCG GAA CAGTATGCTG           AAAAACGGATATATC  82 107
 C1O54_00205 NONE
 C1O54_00200 NONE
 C1O54_00195   44365 ..   44375 -  -4.6  -3.35046   GTATGCCGGGAAAGA                 GGGA TAT CCCC                 AACTGCCGCAGGAAG  52 145
 C1O54_00190   42032 ..   42046 -  -3.6  -3.32022   CGGGGGATAGATTAA               CTGATA ATA TATCAA               CCGATTTTTGGAGAA  48 206
 C1O54_00185   41390 ..   41417 -  -4.8  -3.96148   GCTGTCGAGCATAAA        GGCTC-GGGGGAA TGT TTCCGCAAGAGCC        GTGAGGCCTTTCTTC  59 358
 C1O54_00160   37562 ..   37576 -  -2.1   -4.4261   TTGGCAACAGGAAAA              TGCCGG AAAA CCGG-A               GAAATCCGCCCGTTA  60 38
 C1O54_00155 NONE
 C1O54_00150 NONE
 C1O54_00145   34481 ..   34511 - -15.5  -5.24531   ATTTCCCATAAAAAA       GACTGCCTTCGCT GCAGG AGCGGAGGCAGTC       CGGGGGTAATATAAA 100 59
 C1O54_00140   33699 ..   33714 -  -3.2  -3.53811   TTTACCCGGTTGAAA              GGCC GGAGAAAA GGCC               AATCCCCGGAATCCT  49 95
 C1O54_00135   32110 ..   32138 - -11.7  -3.17219   CACAACCTTCATTAA        GGCAGGACATTCC TAA GGGATTTCCTGCC        TTTTTTACGGAGGGA  77 182
        rpoN   23974 ..   23992 -  -4.5  -3.45395   ACAATTCAAAATATA             GGGGACT GTCAT ATTCCCC             GGCGCAGGGAAGCGG  52 15
 C1O54_00095   22632 ..   22645 -  -5.2    -5.055   CGAACCGGCAAAAAA               CGCC GGCCAG GGCG                AGAAAGCATCCTGAC  79 58
 C1O54_00060   15198 ..   15214 -  -5.1  -3.53012   GCGGGCGCCCGCAAA              TTTCTGC AGC GCTGAAA              ATTGCCTTTTTCCAT  56 252
