locus-tag class description C1O59_00005 PF00308 Bacterial dnaA protein C1O59_00005 PF08299 Bacterial dnaA protein helix-turn-helix C1O59_00005 PF11638 DnaA N-terminal domain C1O59_00010 PF00005 ABC transporter C1O59_00030 PF01784 NIF3 (NGG1p interacting factor 3) C1O59_00035 PF00849 RNA pseudouridylate synthase C1O59_00040 PF00800 Prephenate dehydratase C1O59_00040 PF01817 Chorismate mutase type II C1O59_00040 PF01842 ACT domain C1O59_00050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1O59_00050 PF03120 NAD-dependent DNA ligase OB-fold domain C1O59_00050 PF01653 NAD-dependent DNA ligase adenylation domain C1O59_00050 PF00533 BRCA1 C Terminus (BRCT) domain C1O59_00055 PF01066 CDP-alcohol phosphatidyltransferase C1O59_00065 PF00271 Helicase conserved C-terminal domain C1O59_00065 PF00270 DEAD/DEAH box helicase C1O59_00085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O59_00100 PF07690 Major Facilitator Superfamily C1O59_00105 PF04552 Sigma-54, DNA binding domain C1O59_00105 PF04963 Sigma-54 factor, core binding domain C1O59_00105 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1O59_00115 PF02567 Phenazine biosynthesis-like protein C1O59_00120 PF02659 Putative manganese efflux pump C1O59_00140 PF00004 ATPase family associated with various cellular activities (AAA) C1O59_00140 PF16193 AAA C-terminal domain C1O59_00140 PF12002 MgsA AAA+ ATPase C terminal C1O59_00150 PF01370 NAD dependent epimerase/dehydratase family C1O59_00155 PF01636 Phosphotransferase enzyme family C1O59_00175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O59_00175 PF03129 Anticodon binding domain C1O59_00175 PF09180 Prolyl-tRNA synthetase, C-terminal C1O59_00220 PF13520 Amino acid permease C1O59_00225 PF04960 Glutaminase C1O59_00240 PF01235 Sodium:alanine symporter family C1O59_00250 PF03462 PCRF domain C1O59_00250 PF00472 RF-1 domain C1O59_00255 PF05175 Methyltransferase small domain C1O59_00255 PF17827 PrmC N-terminal domain C1O59_00260 PF04851 Type III restriction enzyme, res subunit C1O59_00260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1O59_00260 PF18074 Primosomal protein N C-terminal domain C1O59_00260 PF17764 3′ DNA-binding domain (3′BD) C1O59_00260 PF00271 Helicase conserved C-terminal domain C1O59_00265 PF01678 Diaminopimelate epimerase C1O59_00285 PF01209 ubiE/COQ5 methyltransferase family C1O59_00290 PF01554 MatE C1O59_00335 PF00682 HMGL-like C1O59_00335 PF08502 LeuA allosteric (dimerisation) domain C1O59_00340 PF01368 DHH family C1O59_00340 PF17768 RecJ OB domain C1O59_00340 PF02272 DHHA1 domain C1O59_00345 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_00345 PF07555 beta-N-acetylglucosaminidase C1O59_00360 PF00005 ABC transporter C1O59_00370 PF02151 UvrB/uvrC motif C1O59_00375 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C1O59_00380 PF02861 Clp amino terminal domain, pathogenicity island component C1O59_00380 PF10431 C-terminal, D2-small domain, of ClpB protein C1O59_00380 PF07724 AAA domain (Cdc48 subfamily) C1O59_00380 PF00004 ATPase family associated with various cellular activities (AAA) C1O59_00380 PF17871 AAA lid domain C1O59_00390 PF00581 Rhodanese-like domain C1O59_00395 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1O59_00400 PF00682 HMGL-like C1O59_00400 PF08502 LeuA allosteric (dimerisation) domain C1O59_00415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1O59_00415 PF02542 YgbB family C1O59_00425 PF00579 tRNA synthetases class I (W and Y) C1O59_00435 PF13277 YmdB-like protein C1O59_00445 PF00899 ThiF family C1O59_00505 PF03793 PASTA domain C1O59_00505 PF00069 Protein kinase domain C1O59_00525 PF13195 Protein of unknown function (DUF4011) C1O59_00525 PF13086 AAA domain C1O59_00525 PF13087 AAA domain C1O59_00525 PF13086 AAA domain C1O59_00525 PF13195 Protein of unknown function (DUF4011) C1O59_00525 PF13087 AAA domain C1O59_00610 PF00294 pfkB family carbohydrate kinase C1O59_00620 PF09297 NADH pyrophosphatase zinc ribbon domain C1O59_00620 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C1O59_00620 PF00293 NUDIX domain C1O59_00635 PF00155 Aminotransferase class I and II C1O59_00640 PF00069 Protein kinase domain C1O59_00645 PF13614 AAA domain C1O59_00650 PF00069 Protein kinase domain C1O59_00690 PF08676 MutL C terminal dimerisation domain C1O59_00690 PF01119 DNA mismatch repair protein, C-terminal domain C1O59_00705 PF04343 Protein of unknown function, DUF488 C1O59_00715 PF03900 Porphobilinogen deaminase, C-terminal domain C1O59_00715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1O59_00720 PF01488 Shikimate / quinate 5-dehydrogenase C1O59_00720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1O59_00730 PF02649 Type I GTP cyclohydrolase folE2 C1O59_00735 PF01084 Ribosomal protein S18 C1O59_00740 PF00471 Ribosomal protein L33 C1O59_00745 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1O59_00750 PF00480 ROK family C1O59_00755 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C1O59_00755 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C1O59_00755 PF01189 16S rRNA methyltransferase RsmB/F C1O59_00765 PF00293 NUDIX domain C1O59_00770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O59_00770 PF00529 HlyD membrane-fusion protein of T1SS C1O59_00775 PF12704 MacB-like periplasmic core domain C1O59_00775 PF02687 FtsX-like permease family C1O59_00775 PF00005 ABC transporter C1O59_00780 PF12704 MacB-like periplasmic core domain C1O59_00780 PF02687 FtsX-like permease family C1O59_00780 PF00005 ABC transporter C1O59_00785 PF02321 Outer membrane efflux protein C1O59_00795 PF00873 AcrB/AcrD/AcrF family C1O59_00800 PF00529 HlyD membrane-fusion protein of T1SS C1O59_00800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O59_00845 PF18389 TrmO C-terminal domain C1O59_00845 PF01980 tRNA-methyltransferase O C1O59_00850 PF01979 Amidohydrolase family C1O59_00855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1O59_00855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1O59_00860 PF00156 Phosphoribosyl transferase domain C1O59_00865 PF00731 AIR carboxylase C1O59_00880 PF04371 Porphyromonas-type peptidyl-arginine deiminase C1O59_00890 PF17820 PDZ domain C1O59_00890 PF02163 Peptidase family M50 C1O59_00895 PF01594 AI-2E family transporter C1O59_00900 PF00884 Sulfatase C1O59_00900 PF16385 Domain of unknown function C1O59_00910 PF07664 Ferrous iron transport protein B C terminus C1O59_00910 PF17910 FeoB cytosolic helical domain C1O59_00910 PF04023 FeoA domain C1O59_00910 PF07670 Nucleoside recognition C1O59_00910 PF02421 Ferrous iron transport protein B C1O59_00940 PF00521 DNA gyrase/topoisomerase IV, subunit A C1O59_00975 PF02195 ParB-like nuclease domain C1O59_00975 PF17762 HTH domain found in ParB protein C1O59_01005 PF13593 SBF-like CPA transporter family (DUF4137) C1O59_01010 PF00579 tRNA synthetases class I (W and Y) C1O59_01010 PF01479 S4 domain C1O59_01030 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_01030 PF12911 N-terminal TM domain of oligopeptide transport permease C C1O59_01035 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_01040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1O59_01050 PF03435 Saccharopine dehydrogenase NADP binding domain C1O59_01050 PF16653 Saccharopine dehydrogenase C-terminal domain C1O59_01080 PF12327 FtsZ family, C-terminal domain C1O59_01080 PF00091 Tubulin/FtsZ family, GTPase domain C1O59_01085 PF02491 SHS2 domain inserted in FTSA C1O59_01095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1O59_01095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1O59_01095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1O59_01095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1O59_01100 PF00005 ABC transporter C1O59_01100 PF00664 ABC transporter transmembrane region C1O59_01105 PF00005 ABC transporter C1O59_01105 PF00664 ABC transporter transmembrane region C1O59_01115 PF02405 Permease MlaE C1O59_01120 PF00005 ABC transporter C1O59_01125 PF02470 MlaD protein C1O59_01150 PF00437 Type II/IV secretion system protein C1O59_01155 PF00437 Type II/IV secretion system protein C1O59_01160 PF00639 PPIC-type PPIASE domain C1O59_01160 PF09312 SurA N-terminal domain C1O59_01175 PF02348 Cytidylyltransferase C1O59_01180 PF00117 Glutamine amidotransferase class-I C1O59_01180 PF06418 CTP synthase N-terminus C1O59_01185 PF00474 Sodium:solute symporter family C1O59_01215 PF13180 PDZ domain C1O59_01220 PF17092 Penicillin-binding protein OB-like domain C1O59_01220 PF00912 Transglycosylase C1O59_01220 PF00905 Penicillin binding protein transpeptidase domain C1O59_01225 PF02646 RmuC family C1O59_01230 PF13419 Haloacid dehalogenase-like hydrolase C1O59_01235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1O59_01235 PF00132 Bacterial transferase hexapeptide (six repeats) C1O59_01245 PF12704 MacB-like periplasmic core domain C1O59_01245 PF02687 FtsX-like permease family C1O59_01245 PF02687 FtsX-like permease family C1O59_01245 PF12704 MacB-like periplasmic core domain C1O59_01250 PF03527 RHS protein C1O59_01295 PF04389 Peptidase family M28 C1O59_01305 PF07859 alpha/beta hydrolase fold C1O59_01305 PF13472 GDSL-like Lipase/Acylhydrolase family C1O59_01310 PF00133 tRNA synthetases class I (I, L, M and V) C1O59_01310 PF08264 Anticodon-binding domain of tRNA C1O59_01315 PF01252 Signal peptidase (SPase) II C1O59_01330 PF00266 Aminotransferase class-V C1O59_01340 PF00069 Protein kinase domain C1O59_01340 PF08308 PEGA domain C1O59_01350 PF01245 Ribosomal protein L19 C1O59_01365 PF01039 Carboxyl transferase domain C1O59_01375 PF02436 Conserved carboxylase domain C1O59_01375 PF00364 Biotin-requiring enzyme C1O59_01375 PF02785 Biotin carboxylase C-terminal domain C1O59_01375 PF00289 Biotin carboxylase, N-terminal domain C1O59_01375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O59_01375 PF00682 HMGL-like C1O59_01380 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C1O59_01385 PF02237 Biotin protein ligase C terminal domain C1O59_01385 PF08279 HTH domain C1O59_01385 PF03099 Biotin/lipoate A/B protein ligase family C1O59_01390 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1O59_01390 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1O59_01405 PF00483 Nucleotidyl transferase C1O59_01410 PF16363 GDP-mannose 4,6 dehydratase C1O59_01415 PF00365 Phosphofructokinase C1O59_01430 PF02637 GatB domain C1O59_01430 PF02934 GatB/GatE catalytic domain C1O59_01435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1O59_01435 PF00205 Thiamine pyrophosphate enzyme, central domain C1O59_01435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O59_01455 PF00690 Cation transporter/ATPase, N-terminus C1O59_01455 PF00689 Cation transporting ATPase, C-terminus C1O59_01460 PF00529 HlyD membrane-fusion protein of T1SS C1O59_01460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O59_01465 PF00873 AcrB/AcrD/AcrF family C1O59_01470 PF00939 Sodium:sulfate symporter transmembrane region C1O59_01480 PF08543 Phosphomethylpyrimidine kinase C1O59_01545 PF01327 Polypeptide deformylase C1O59_01550 PF00107 Zinc-binding dehydrogenase C1O59_01550 PF08240 Alcohol dehydrogenase GroES-like domain C1O59_01555 PF00343 Carbohydrate phosphorylase C1O59_01555 PF11897 Protein of unknown function (DUF3417) C1O59_01560 PF00027 Cyclic nucleotide-binding domain C1O59_01560 PF00520 Ion transport protein C1O59_01565 PF03960 ArsC family C1O59_01570 PF00753 Metallo-beta-lactamase superfamily C1O59_01570 PF10996 Beta-Casp domain C1O59_01570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O59_01590 PF01479 S4 domain C1O59_01590 PF00849 RNA pseudouridylate synthase C1O59_01600 PF01746 tRNA (Guanine-1)-methyltransferase C1O59_01605 PF03462 PCRF domain C1O59_01605 PF00472 RF-1 domain C1O59_01615 PF00575 S1 RNA binding domain C1O59_01670 PF02548 Ketopantoate hydroxymethyltransferase C1O59_01675 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1O59_01680 PF01113 Dihydrodipicolinate reductase, N-terminus C1O59_01680 PF05173 Dihydrodipicolinate reductase, C-terminus C1O59_01685 PF00701 Dihydrodipicolinate synthetase family C1O59_01725 PF00578 AhpC/TSA family C1O59_01750 PF07883 Cupin domain C1O59_01750 PF02130 Uncharacterized protein family UPF0054 C1O59_01755 PF07698 7TM receptor with intracellular HD hydrolase C1O59_01755 PF07697 7TM-HD extracellular C1O59_01755 PF01966 HD domain C1O59_01760 PF02504 Fatty acid synthesis protein C1O59_01765 PF01783 Ribosomal L32p protein family C1O59_01775 PF01230 HIT domain C1O59_01780 PF03481 Putative GTP-binding controlling metal-binding C1O59_01780 PF01300 Telomere recombination C1O59_01785 PF01202 Shikimate kinase C1O59_01790 PF00886 Ribosomal protein S16 C1O59_01805 PF02899 Phage integrase, N-terminal SAM-like domain C1O59_01805 PF00589 Phage integrase family C1O59_01820 PF02699 Preprotein translocase subunit C1O59_01825 PF01702 Queuine tRNA-ribosyltransferase C1O59_01830 PF02390 Putative methyltransferase C1O59_01840 PF05036 Sporulation related domain C1O59_01840 PF03330 Lytic transglycolase C1O59_01845 PF01351 Ribonuclease HII C1O59_01845 PF11858 Domain of unknown function (DUF3378) C1O59_01850 PF00216 Bacterial DNA-binding protein C1O59_01880 PF01618 MotA/TolQ/ExbB proton channel family C1O59_01900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O59_01900 PF00703 Glycosyl hydrolases family 2 C1O59_01900 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1O59_01900 PF16355 Domain of unknown function (DUF4982) C1O59_01900 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O59_01905 PF10458 Valyl tRNA synthetase tRNA binding arm C1O59_01905 PF08264 Anticodon-binding domain of tRNA C1O59_01905 PF00133 tRNA synthetases class I (I, L, M and V) C1O59_01915 PF00238 Ribosomal protein L14p/L23e C1O59_01920 PF00366 Ribosomal protein S17 C1O59_01925 PF00831 Ribosomal L29 protein C1O59_01930 PF00252 Ribosomal protein L16p/L10e C1O59_01935 PF07650 KH domain C1O59_01935 PF00189 Ribosomal protein S3, C-terminal domain C1O59_01940 PF00237 Ribosomal protein L22p/L17e C1O59_01950 PF00203 Ribosomal protein S19 C1O59_01955 PF00181 Ribosomal Proteins L2, RNA binding domain C1O59_01955 PF03947 Ribosomal Proteins L2, C-terminal domain C1O59_01960 PF00276 Ribosomal protein L23 C1O59_01965 PF00573 Ribosomal protein L4/L1 family C1O59_01970 PF00297 Ribosomal protein L3 C1O59_01975 PF00338 Ribosomal protein S10p/S20e C1O59_01980 PF14492 Elongation Factor G, domain II C1O59_01980 PF03144 Elongation factor Tu domain 2 C1O59_01980 PF00009 Elongation factor Tu GTP binding domain C1O59_01980 PF03764 Elongation factor G, domain IV C1O59_01980 PF00679 Elongation factor G C-terminus C1O59_01985 PF00177 Ribosomal protein S7p/S5e C1O59_01990 PF00164 Ribosomal protein S12/S23 C1O59_02010 PF00989 PAS fold C1O59_02010 PF00512 His Kinase A (phospho-acceptor) domain C1O59_02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_02025 PF02609 Exonuclease VII small subunit C1O59_02030 PF02780 Transketolase, C-terminal domain C1O59_02030 PF02779 Transketolase, pyrimidine binding domain C1O59_02030 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1O59_02045 PF03739 Lipopolysaccharide export system permease LptF/LptG C1O59_02050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1O59_02050 PF01926 50S ribosome-binding GTPase C1O59_02055 PF00005 ABC transporter C1O59_02055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O59_02070 PF02687 FtsX-like permease family C1O59_02070 PF00005 ABC transporter C1O59_02070 PF12704 MacB-like periplasmic core domain C1O59_02080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1O59_02080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1O59_02110 PF02683 Cytochrome C biogenesis protein transmembrane region C1O59_02110 PF11412 Disulphide bond corrector protein DsbC C1O59_02125 PF05188 MutS domain II C1O59_02125 PF00488 MutS domain V C1O59_02125 PF05192 MutS domain III C1O59_02125 PF05190 MutS family domain IV C1O59_02125 PF01624 MutS domain I C1O59_02140 PF00004 ATPase family associated with various cellular activities (AAA) C1O59_02140 PF17862 AAA+ lid domain C1O59_02140 PF01434 Peptidase family M41 C1O59_02155 PF00378 Enoyl-CoA hydratase/isomerase C1O59_02195 PF00005 ABC transporter C1O59_02210 PF00005 ABC transporter C1O59_02210 PF12857 TOBE-like domain C1O59_02220 PF00106 short chain dehydrogenase C1O59_02235 PF00158 Sigma-54 interaction domain C1O59_02235 PF01590 GAF domain C1O59_02235 PF02954 Bacterial regulatory protein, Fis family C1O59_02240 PF00654 Voltage gated chloride channel C1O59_02250 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_02250 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_02250 PF07691 PA14 domain C1O59_02265 PF00282 Pyridoxal-dependent decarboxylase conserved domain C1O59_02275 PF14579 Helix-hairpin-helix motif C1O59_02275 PF02811 PHP domain C1O59_02275 PF01336 OB-fold nucleic acid binding domain C1O59_02275 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1O59_02275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1O59_02280 PF01180 Dihydroorotate dehydrogenase C1O59_02285 PF02581 Thiamine monophosphate synthase C1O59_02305 PF01595 Cyclin M transmembrane N-terminal domain C1O59_02305 PF00571 CBS domain C1O59_02305 PF03471 Transporter associated domain C1O59_02310 PF01595 Cyclin M transmembrane N-terminal domain C1O59_02310 PF03471 Transporter associated domain C1O59_02310 PF00571 CBS domain C1O59_02315 PF03725 3' exoribonuclease family, domain 2 C1O59_02315 PF00575 S1 RNA binding domain C1O59_02315 PF01138 3' exoribonuclease family, domain 1 C1O59_02315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1O59_02315 PF00013 KH domain C1O59_02320 PF00312 Ribosomal protein S15 C1O59_02350 PF01416 tRNA pseudouridine synthase C1O59_02355 PF01467 Cytidylyltransferase-like C1O59_02370 PF07963 Prokaryotic N-terminal methylation motif C1O59_02370 PF14245 Type IV pilin PilA C1O59_02375 PF03725 3' exoribonuclease family, domain 2 C1O59_02375 PF01138 3' exoribonuclease family, domain 1 C1O59_02385 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_02385 PF07691 PA14 domain C1O59_02385 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_02395 PF02457 DisA bacterial checkpoint controller nucleotide-binding C1O59_02405 PF00005 ABC transporter C1O59_02410 PF02569 Pantoate-beta-alanine ligase C1O59_02420 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1O59_02420 PF00132 Bacterial transferase hexapeptide (six repeats) C1O59_02425 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_02430 PF00005 ABC transporter C1O59_02445 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_02445 PF07555 beta-N-acetylglucosaminidase C1O59_02460 PF13580 SIS domain C1O59_02465 PF01467 Cytidylyltransferase-like C1O59_02465 PF00294 pfkB family carbohydrate kinase C1O59_02470 PF01165 Ribosomal protein S21 C1O59_02475 PF00202 Aminotransferase class-III C1O59_02490 PF00083 Sugar (and other) transporter C1O59_02500 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C1O59_02500 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O59_02505 PF00925 GTP cyclohydrolase II C1O59_02505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1O59_02510 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1O59_02515 PF01029 NusB family C1O59_02520 PF00448 SRP54-type protein, GTPase domain C1O59_02520 PF02881 SRP54-type protein, helical bundle domain C1O59_02525 PF04055 Radical SAM superfamily C1O59_02530 PF03796 DnaB-like helicase C terminal domain C1O59_02530 PF00772 DnaB-like helicase N terminal domain C1O59_02540 PF04191 Phospholipid methyltransferase C1O59_02545 PF00994 Probable molybdopterin binding domain C1O59_02545 PF18146 Damage-inducible protein CinA KH domain C1O59_02545 PF02464 Competence-damaged protein C1O59_02550 PF02887 Pyruvate kinase, alpha/beta domain C1O59_02550 PF00391 PEP-utilising enzyme, mobile domain C1O59_02550 PF00224 Pyruvate kinase, barrel domain C1O59_02555 PF00583 Acetyltransferase (GNAT) family C1O59_02580 PF01479 S4 domain C1O59_02580 PF00163 Ribosomal protein S4/S9 N-terminal domain C1O59_02585 PF00411 Ribosomal protein S11 C1O59_02590 PF00416 Ribosomal protein S13/S18 C1O59_02595 PF08331 Domain of unknown function (DUF1730) C1O59_02610 PF17782 DprA winged helix domain C1O59_02610 PF02481 DNA recombination-mediator protein A C1O59_02615 PF07943 Penicillin-binding protein 5, C-terminal domain C1O59_02615 PF00768 D-alanyl-D-alanine carboxypeptidase C1O59_02620 PF01926 50S ribosome-binding GTPase C1O59_02620 PF06071 Protein of unknown function (DUF933) C1O59_02630 PF01597 Glycine cleavage H-protein C1O59_02635 PF02347 Glycine cleavage system P-protein C1O59_02650 PF00884 Sulfatase C1O59_02650 PF16385 Domain of unknown function C1O59_02660 PF00271 Helicase conserved C-terminal domain C1O59_02660 PF00270 DEAD/DEAH box helicase C1O59_02660 PF03880 DbpA RNA binding domain C1O59_02680 PF07681 DoxX C1O59_02685 PF00586 AIR synthase related protein, N-terminal domain C1O59_02685 PF02769 AIR synthase related protein, C-terminal domain C1O59_02690 PF00156 Phosphoribosyl transferase domain C1O59_02695 PF04542 Sigma-70 region 2 C1O59_02695 PF08281 Sigma-70, region 4 C1O59_02715 PF02441 Flavoprotein C1O59_02735 PF03976 Polyphosphate kinase 2 (PPK2) C1O59_02740 PF08220 DeoR-like helix-turn-helix domain C1O59_02740 PF00455 DeoR C terminal sensor domain C1O59_02755 PF00266 Aminotransferase class-V C1O59_02760 PF04127 DNA / pantothenate metabolism flavoprotein C1O59_02760 PF02441 Flavoprotein C1O59_02765 PF03193 RsgA GTPase C1O59_02795 PF03976 Polyphosphate kinase 2 (PPK2) C1O59_02805 PF08305 NPCBM/NEW2 domain C1O59_02815 PF12146 Serine aminopeptidase, S33 C1O59_02820 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1O59_02830 PF01016 Ribosomal L27 protein C1O59_02835 PF01475 Ferric uptake regulator family C1O59_02840 PF00005 ABC transporter C1O59_02845 PF01458 Uncharacterized protein family (UPF0051) C1O59_02850 PF01458 Uncharacterized protein family (UPF0051) C1O59_02860 PF00884 Sulfatase C1O59_02865 PF04055 Radical SAM superfamily C1O59_02865 PF06968 Biotin and Thiamin Synthesis associated domain C1O59_02870 PF00202 Aminotransferase class-III C1O59_02900 PF00535 Glycosyl transferase family 2 C1O59_02910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1O59_02930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1O59_02930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1O59_02935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O59_02935 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1O59_02940 PF00231 ATP synthase C1O59_02945 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1O59_02945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O59_02945 PF00306 ATP synthase alpha/beta chain, C terminal domain C1O59_02950 PF00213 ATP synthase delta (OSCP) subunit C1O59_02955 PF00430 ATP synthase B/B' CF(0) C1O59_02960 PF00137 ATP synthase subunit C C1O59_02965 PF00119 ATP synthase A chain C1O59_02975 PF00905 Penicillin binding protein transpeptidase domain C1O59_02975 PF03717 Penicillin-binding Protein dimerisation domain C1O59_03020 PF00899 ThiF family C1O59_03025 PF01380 SIS domain C1O59_03025 PF00571 CBS domain C1O59_03045 PF06426 Serine acetyltransferase, N-terminal C1O59_03045 PF00132 Bacterial transferase hexapeptide (six repeats) C1O59_03055 PF00171 Aldehyde dehydrogenase family C1O59_03060 PF01472 PUA domain C1O59_03060 PF00696 Amino acid kinase family C1O59_03065 PF02779 Transketolase, pyrimidine binding domain C1O59_03065 PF02780 Transketolase, C-terminal domain C1O59_03065 PF00456 Transketolase, thiamine diphosphate binding domain C1O59_03070 PF03449 Transcription elongation factor, N-terminal C1O59_03070 PF01272 Transcription elongation factor, GreA/GreB, C-term C1O59_03075 PF01259 SAICAR synthetase C1O59_03085 PF00586 AIR synthase related protein, N-terminal domain C1O59_03085 PF02769 AIR synthase related protein, C-terminal domain C1O59_03085 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1O59_03100 PF05343 M42 glutamyl aminopeptidase C1O59_03110 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1O59_03110 PF00703 Glycosyl hydrolases family 2 C1O59_03110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O59_03110 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O59_03120 PF00575 S1 RNA binding domain C1O59_03120 PF10150 Ribonuclease E/G family C1O59_03145 PF02472 Biopolymer transport protein ExbD/TolR C1O59_03160 PF00730 HhH-GPD superfamily base excision DNA repair protein C1O59_03185 PF00218 Indole-3-glycerol phosphate synthase C1O59_03190 PF02021 Uncharacterised protein family UPF0102 C1O59_03195 PF01351 Ribonuclease HII C1O59_03200 PF03471 Transporter associated domain C1O59_03200 PF01595 Cyclin M transmembrane N-terminal domain C1O59_03200 PF00571 CBS domain C1O59_03210 PF00253 Ribosomal protein S14p/S29e C1O59_03220 PF00764 Arginosuccinate synthase C1O59_03225 PF00884 Sulfatase C1O59_03230 PF01029 NusB family C1O59_03230 PF01189 16S rRNA methyltransferase RsmB/F C1O59_03235 PF00121 Triosephosphate isomerase C1O59_03250 PF00884 Sulfatase C1O59_03280 PF03819 MazG nucleotide pyrophosphohydrolase domain C1O59_03290 PF00570 HRDC domain C1O59_03290 PF01612 3'-5' exonuclease C1O59_03305 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1O59_03315 PF05193 Peptidase M16 inactive domain C1O59_03315 PF00675 Insulinase (Peptidase family M16) C1O59_03335 PF02677 Epoxyqueuosine reductase QueH C1O59_03340 PF03466 LysR substrate binding domain C1O59_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1O59_03345 PF02219 Methylenetetrahydrofolate reductase C1O59_03350 PF01717 Cobalamin-independent synthase, Catalytic domain C1O59_03350 PF08267 Cobalamin-independent synthase, N-terminal domain C1O59_03370 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O59_03370 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C1O59_03375 PF03734 L,D-transpeptidase catalytic domain C1O59_03395 PF00585 C-terminal regulatory domain of Threonine dehydratase C1O59_03395 PF00291 Pyridoxal-phosphate dependent enzyme C1O59_03400 PF02545 Maf-like protein C1O59_03405 PF13167 GTP-binding GTPase N-terminal C1O59_03405 PF01926 50S ribosome-binding GTPase C1O59_03405 PF16360 GTP-binding GTPase Middle Region C1O59_03410 PF00069 Protein kinase domain C1O59_03425 PF00586 AIR synthase related protein, N-terminal domain C1O59_03425 PF02769 AIR synthase related protein, C-terminal domain C1O59_03435 PF02224 Cytidylate kinase C1O59_03445 PF02463 RecF/RecN/SMC N terminal domain C1O59_03455 PF14622 Ribonuclease-III-like C1O59_03455 PF00035 Double-stranded RNA binding motif C1O59_03470 PF03372 Endonuclease/Exonuclease/phosphatase family C1O59_03475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1O59_03490 PF01502 Phosphoribosyl-AMP cyclohydrolase C1O59_03495 PF09115 DNA polymerase III, delta subunit, C terminal C1O59_03510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O59_03510 PF02142 MGS-like domain C1O59_03510 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1O59_03530 PF08241 Methyltransferase domain C1O59_03535 PF00795 Carbon-nitrogen hydrolase C1O59_03535 PF02540 NAD synthase C1O59_03540 PF00893 Small Multidrug Resistance protein C1O59_03580 PF05491 RuvB C-terminal winged helix domain C1O59_03580 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1O59_03580 PF17864 RuvB AAA lid domain C1O59_03585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1O59_03585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1O59_03590 PF00667 FAD binding domain C1O59_03590 PF00175 Oxidoreductase NAD-binding domain C1O59_03590 PF00258 Flavodoxin C1O59_03595 PF00535 Glycosyl transferase family 2 C1O59_03600 PF00535 Glycosyl transferase family 2 C1O59_03625 PF00534 Glycosyl transferases group 1 C1O59_03635 PF01757 Acyltransferase family C1O59_03660 PF01926 50S ribosome-binding GTPase C1O59_03660 PF12631 MnmE helical domain C1O59_03660 PF10396 GTP-binding protein TrmE N-terminus C1O59_03670 PF00589 Phage integrase family C1O59_03670 PF02899 Phage integrase, N-terminal SAM-like domain C1O59_03690 PF12728 Helix-turn-helix domain C1O59_03690 PF12727 PBP superfamily domain C1O59_03735 PF02384 N-6 DNA Methylase C1O59_03745 PF02796 Helix-turn-helix domain of resolvase C1O59_03745 PF00239 Resolvase, N terminal domain C1O59_03760 PF03458 UPF0126 domain C1O59_03765 PF10996 Beta-Casp domain C1O59_03765 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O59_03765 PF00753 Metallo-beta-lactamase superfamily C1O59_03770 PF02381 MraZ protein, putative antitoxin-like C1O59_03775 PF01795 MraW methylase family C1O59_03785 PF00905 Penicillin binding protein transpeptidase domain C1O59_03785 PF03717 Penicillin-binding Protein dimerisation domain C1O59_03785 PF03793 PASTA domain C1O59_03790 PF02875 Mur ligase family, glutamate ligase domain C1O59_03790 PF08245 Mur ligase middle domain C1O59_03790 PF01225 Mur ligase family, catalytic domain C1O59_03795 PF01225 Mur ligase family, catalytic domain C1O59_03795 PF02875 Mur ligase family, glutamate ligase domain C1O59_03795 PF08245 Mur ligase middle domain C1O59_03800 PF00953 Glycosyl transferase family 4 C1O59_03800 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1O59_03805 PF08245 Mur ligase middle domain C1O59_03805 PF02875 Mur ligase family, glutamate ligase domain C1O59_03815 PF01098 Cell cycle protein C1O59_03820 PF04101 Glycosyltransferase family 28 C-terminal domain C1O59_03820 PF03033 Glycosyltransferase family 28 N-terminal domain C1O59_03825 PF08245 Mur ligase middle domain C1O59_03825 PF01225 Mur ligase family, catalytic domain C1O59_03825 PF02875 Mur ligase family, glutamate ligase domain C1O59_03830 PF07478 D-ala D-ala ligase C-terminus C1O59_03830 PF01820 D-ala D-ala ligase N-terminus C1O59_03840 PF00154 recA bacterial DNA recombination protein C1O59_03845 PF01520 N-acetylmuramoyl-L-alanine amidase C1O59_03850 PF03099 Biotin/lipoate A/B protein ligase family C1O59_03855 PF00330 Aconitase family (aconitate hydratase) C1O59_03860 PF00694 Aconitase C-terminal domain C1O59_03870 PF13180 PDZ domain C1O59_03870 PF17820 PDZ domain C1O59_03880 PF01761 3-dehydroquinate synthase C1O59_03890 PF00005 ABC transporter C1O59_03890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O59_03900 PF00889 Elongation factor TS C1O59_03915 PF00793 DAHP synthetase I family C1O59_03930 PF00005 ABC transporter C1O59_03930 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1O59_03940 PF01225 Mur ligase family, catalytic domain C1O59_03940 PF02875 Mur ligase family, glutamate ligase domain C1O59_03940 PF08245 Mur ligase middle domain C1O59_03945 PF00691 OmpA family C1O59_03950 PF13361 UvrD-like helicase C-terminal domain C1O59_03950 PF00580 UvrD/REP helicase N-terminal domain C1O59_03955 PF01638 HxlR-like helix-turn-helix C1O59_03965 PF00005 ABC transporter C1O59_03965 PF17755 UvrA DNA-binding domain C1O59_03965 PF17760 UvrA interaction domain C1O59_04005 PF00152 tRNA synthetases class II (D, K and N) C1O59_04005 PF01336 OB-fold nucleic acid binding domain C1O59_04015 PF00085 Thioredoxin C1O59_04060 PF03466 LysR substrate binding domain C1O59_04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1O59_04065 PF03601 Conserved hypothetical protein 698 C1O59_04070 PF00266 Aminotransferase class-V C1O59_04085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1O59_04085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1O59_04085 PF01842 ACT domain C1O59_04095 PF04055 Radical SAM superfamily C1O59_04100 PF07497 Rho termination factor, RNA-binding domain C1O59_04100 PF07498 Rho termination factor, N-terminal domain C1O59_04100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O59_04105 PF01709 Transcriptional regulator C1O59_04110 PF16916 Dimerisation domain of Zinc Transporter C1O59_04110 PF01545 Cation efflux family C1O59_04115 PF00999 Sodium/hydrogen exchanger family C1O59_04115 PF02254 TrkA-N domain C1O59_04125 PF02547 Queuosine biosynthesis protein C1O59_04130 PF12127 SigmaW regulon antibacterial C1O59_04140 PF05690 Thiazole biosynthesis protein ThiG C1O59_04145 PF13520 Amino acid permease C1O59_04155 PF01594 AI-2E family transporter C1O59_04160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1O59_04160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1O59_04165 PF01116 Fructose-bisphosphate aldolase class-II C1O59_04175 PF01063 Amino-transferase class IV C1O59_04180 PF00722 Glycosyl hydrolases family 16 C1O59_04185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1O59_04185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1O59_04205 PF01926 50S ribosome-binding GTPase C1O59_04205 PF01018 GTP1/OBG C1O59_04210 PF01636 Phosphotransferase enzyme family C1O59_04240 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1O59_04245 PF00478 IMP dehydrogenase / GMP reductase domain C1O59_04245 PF00571 CBS domain C1O59_04250 PF00958 GMP synthase C terminal domain C1O59_04250 PF02540 NAD synthase C1O59_04250 PF00117 Glutamine amidotransferase class-I C1O59_04260 PF12464 Maltose acetyltransferase C1O59_04260 PF14602 Hexapeptide repeat of succinyl-transferase C1O59_04265 PF13419 Haloacid dehalogenase-like hydrolase C1O59_04290 PF00793 DAHP synthetase I family C1O59_04295 PF00114 Pilin (bacterial filament) C1O59_04295 PF07963 Prokaryotic N-terminal methylation motif C1O59_04305 PF02261 Aspartate decarboxylase C1O59_04310 PF01687 Riboflavin kinase C1O59_04310 PF06574 FAD synthetase C1O59_04315 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1O59_04315 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1O59_04325 PF00149 Calcineurin-like phosphoesterase C1O59_04330 PF08759 Glycosyltransferase GT-D fold C1O59_04330 PF01501 Glycosyl transferase family 8 C1O59_04335 PF01501 Glycosyl transferase family 8 C1O59_04335 PF00535 Glycosyl transferase family 2 C1O59_04345 PF01370 NAD dependent epimerase/dehydratase family C1O59_04350 PF00535 Glycosyl transferase family 2 C1O59_04370 PF01757 Acyltransferase family C1O59_04385 PF03600 Citrate transporter C1O59_04385 PF02080 TrkA-C domain C1O59_04420 PF01301 Glycosyl hydrolases family 35 C1O59_04425 PF00300 Histidine phosphatase superfamily (branch 1) C1O59_04430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1O59_04430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1O59_04435 PF01757 Acyltransferase family C1O59_04440 PF07690 Major Facilitator Superfamily C1O59_04445 PF03061 Thioesterase superfamily C1O59_04465 PF00565 Staphylococcal nuclease homologue C1O59_04480 PF02195 ParB-like nuclease domain C1O59_04485 PF01507 Phosphoadenosine phosphosulfate reductase family C1O59_04485 PF11922 Domain of unknown function (DUF3440) C1O59_04500 PF00180 Isocitrate/isopropylmalate dehydrogenase C1O59_04515 PF01078 Magnesium chelatase, subunit ChlI C1O59_04515 PF13335 Magnesium chelatase, subunit ChlI C-terminal C1O59_04525 PF01053 Cys/Met metabolism PLP-dependent enzyme C1O59_04535 PF04055 Radical SAM superfamily C1O59_04535 PF13186 Iron-sulfur cluster-binding domain C1O59_04550 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1O59_04550 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1O59_04555 PF02660 Glycerol-3-phosphate acyltransferase C1O59_04565 PF00152 tRNA synthetases class II (D, K and N) C1O59_04565 PF01336 OB-fold nucleic acid binding domain C1O59_04580 PF01638 HxlR-like helix-turn-helix C1O59_04590 PF00977 Histidine biosynthesis protein C1O59_04600 PF02386 Cation transport protein C1O59_04610 PF00270 DEAD/DEAH box helicase C1O59_04610 PF11898 Domain of unknown function (DUF3418) C1O59_04610 PF04408 Helicase associated domain (HA2) C1O59_04610 PF00271 Helicase conserved C-terminal domain C1O59_04610 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C1O59_04615 PF10369 Small subunit of acetolactate synthase C1O59_04620 PF13180 PDZ domain C1O59_04620 PF00595 PDZ domain C1O59_04630 PF01134 Glucose inhibited division protein A C1O59_04630 PF13932 GidA associated domain C1O59_04635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1O59_04635 PF01872 RibD C-terminal domain C1O59_04640 PF00712 DNA polymerase III beta subunit, N-terminal domain C1O59_04640 PF02767 DNA polymerase III beta subunit, central domain C1O59_04640 PF02768 DNA polymerase III beta subunit, C-terminal domain C1O59_04665 PF01476 LysM domain C1O59_04665 PF00877 NlpC/P60 family C1O59_04670 PF01026 TatD related DNase C1O59_04680 PF16353 Domain of unknown function(DUF4981) C1O59_04680 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O59_04680 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O59_04680 PF02929 Beta galactosidase small chain C1O59_04680 PF00703 Glycosyl hydrolases family 2 C1O59_04695 PF13493 Domain of unknown function (DUF4118) C1O59_04695 PF02702 Osmosensitive K+ channel His kinase sensor domain C1O59_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_04695 PF13492 GAF domain C1O59_04695 PF00512 His Kinase A (phospho-acceptor) domain C1O59_04700 PF00072 Response regulator receiver domain C1O59_04700 PF00486 Transcriptional regulatory protein, C terminal C1O59_04710 PF03814 Potassium-transporting ATPase A subunit C1O59_04720 PF02669 K+-transporting ATPase, c chain C1O59_04735 PF02861 Clp amino terminal domain, pathogenicity island component C1O59_04735 PF17871 AAA lid domain C1O59_04735 PF07724 AAA domain (Cdc48 subfamily) C1O59_04735 PF00004 ATPase family associated with various cellular activities (AAA) C1O59_04735 PF10431 C-terminal, D2-small domain, of ClpB protein C1O59_04785 PF03477 ATP cone domain C1O59_04795 PF00916 Sulfate permease family C1O59_04795 PF01740 STAS domain C1O59_04800 PF14698 Argininosuccinate lyase C-terminal C1O59_04800 PF00206 Lyase C1O59_04815 PF00113 Enolase, C-terminal TIM barrel domain C1O59_04815 PF03952 Enolase, N-terminal domain C1O59_04820 PF01261 Xylose isomerase-like TIM barrel C1O59_04830 PF02973 Sialidase, N-terminal domain C1O59_04830 PF00754 F5/8 type C domain C1O59_04830 PF13088 BNR repeat-like domain C1O59_04835 PF01336 OB-fold nucleic acid binding domain C1O59_04835 PF01966 HD domain C1O59_04845 PF01938 TRAM domain C1O59_04845 PF00919 Uncharacterized protein family UPF0004 C1O59_04845 PF04055 Radical SAM superfamily C1O59_04850 PF05958 tRNA (Uracil-5-)-methyltransferase C1O59_04850 PF01938 TRAM domain C1O59_04865 PF12161 HsdM N-terminal domain C1O59_04865 PF02384 N-6 DNA Methylase C1O59_04870 PF01420 Type I restriction modification DNA specificity domain C1O59_04880 PF12008 Type I restriction and modification enzyme - subunit R C terminal C1O59_04880 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C1O59_04880 PF18766 SWI2/SNF2 ATPase C1O59_04890 PF00216 Bacterial DNA-binding protein C1O59_04895 PF16875 Glycosyl hydrolase family 36 N-terminal domain C1O59_04895 PF16874 Glycosyl hydrolase family 36 C-terminal domain C1O59_04915 PF02080 TrkA-C domain C1O59_04915 PF06826 Predicted Permease Membrane Region C1O59_04925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_04925 PF00512 His Kinase A (phospho-acceptor) domain C1O59_04925 PF00989 PAS fold C1O59_04930 PF00939 Sodium:sulfate symporter transmembrane region C1O59_04955 PF08019 Phosphoethanolamine transferase EptA/EptB C1O59_04955 PF00884 Sulfatase C1O59_04960 PF02915 Rubrerythrin C1O59_04970 PF05343 M42 glutamyl aminopeptidase C1O59_04975 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_04975 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_04975 PF07691 PA14 domain C1O59_04985 PF00245 Alkaline phosphatase C1O59_04990 PF01741 Large-conductance mechanosensitive channel, MscL C1O59_04995 PF00202 Aminotransferase class-III C1O59_05005 PF08207 Elongation factor P (EF-P) KOW-like domain C1O59_05005 PF01132 Elongation factor P (EF-P) OB domain C1O59_05005 PF09285 Elongation factor P, C-terminal C1O59_05015 PF00403 Heavy-metal-associated domain C1O59_05020 PF02463 RecF/RecN/SMC N terminal domain C1O59_05025 PF12706 Beta-lactamase superfamily domain C1O59_05025 PF03099 Biotin/lipoate A/B protein ligase family C1O59_05030 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1O59_05060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O59_05060 PF02817 e3 binding domain C1O59_05060 PF00364 Biotin-requiring enzyme C1O59_05065 PF02779 Transketolase, pyrimidine binding domain C1O59_05065 PF02780 Transketolase, C-terminal domain C1O59_05070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1O59_05070 PF02779 Transketolase, pyrimidine binding domain C1O59_05070 PF02780 Transketolase, C-terminal domain C1O59_05085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O59_05085 PF00529 HlyD membrane-fusion protein of T1SS C1O59_05090 PF00873 AcrB/AcrD/AcrF family C1O59_05095 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1O59_05095 PF03797 Autotransporter beta-domain C1O59_05095 PF07548 Chlamydia polymorphic membrane protein middle domain C1O59_05125 PF01131 DNA topoisomerase C1O59_05125 PF01751 Toprim domain C1O59_05145 PF01471 Putative peptidoglycan binding domain C1O59_05145 PF01476 LysM domain C1O59_05145 PF01510 N-acetylmuramoyl-L-alanine amidase C1O59_05150 PF00330 Aconitase family (aconitate hydratase) C1O59_05150 PF00694 Aconitase C-terminal domain C1O59_05165 PF01625 Peptide methionine sulfoxide reductase C1O59_05165 PF01641 SelR domain C1O59_05180 PF01139 tRNA-splicing ligase RtcB C1O59_05190 PF07690 Major Facilitator Superfamily C1O59_05200 PF01923 Cobalamin adenosyltransferase C1O59_05210 PF17876 Cold shock domain C1O59_05210 PF00773 RNB domain C1O59_05210 PF00575 S1 RNA binding domain C1O59_05210 PF08206 Ribonuclease B OB domain C1O59_05235 PF12392 Collagenase C1O59_05235 PF01136 Peptidase family U32 C1O59_05240 PF02875 Mur ligase family, glutamate ligase domain C1O59_05240 PF08245 Mur ligase middle domain C1O59_05255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O59_05260 PF12419 SNF2 Helicase protein C1O59_05260 PF00271 Helicase conserved C-terminal domain C1O59_05260 PF00176 SNF2 family N-terminal domain C1O59_05265 PF02872 5'-nucleotidase, C-terminal domain C1O59_05265 PF00149 Calcineurin-like phosphoesterase C1O59_05270 PF03330 Lytic transglycolase C1O59_05270 PF05036 Sporulation related domain C1O59_05275 PF01513 ATP-NAD kinase C1O59_05280 PF00467 KOW motif C1O59_05280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1O59_05285 PF00673 ribosomal L5P family C-terminus C1O59_05285 PF00281 Ribosomal protein L5 C1O59_05290 PF00410 Ribosomal protein S8 C1O59_05295 PF00347 Ribosomal protein L6 C1O59_05300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1O59_05305 PF00333 Ribosomal protein S5, N-terminal domain C1O59_05305 PF03719 Ribosomal protein S5, C-terminal domain C1O59_05310 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1O59_05315 PF00344 SecY translocase C1O59_05320 PF05191 Adenylate kinase, active site lid C1O59_05325 PF00557 Metallopeptidase family M24 C1O59_05340 PF17941 Polyphosphate kinase C-terminal domain 1 C1O59_05340 PF13089 Polyphosphate kinase N-terminal domain C1O59_05340 PF13090 Polyphosphate kinase C-terminal domain 2 C1O59_05340 PF02503 Polyphosphate kinase middle domain C1O59_05345 PF01501 Glycosyl transferase family 8 C1O59_05355 PF00535 Glycosyl transferase family 2 C1O59_05360 PF01531 Glycosyl transferase family 11 C1O59_05365 PF00535 Glycosyl transferase family 2 C1O59_05380 PF00535 Glycosyl transferase family 2 C1O59_05385 PF01965 DJ-1/PfpI family C1O59_05390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O59_05390 PF02817 e3 binding domain C1O59_05390 PF00364 Biotin-requiring enzyme C1O59_05395 PF01979 Amidohydrolase family C1O59_05400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1O59_05410 PF02554 Carbon starvation protein CstA C1O59_05425 PF00884 Sulfatase C1O59_05430 PF02033 Ribosome-binding factor A C1O59_05435 PF00009 Elongation factor Tu GTP binding domain C1O59_05435 PF04760 Translation initiation factor IF-2, N-terminal region C1O59_05435 PF11987 Translation-initiation factor 2 C1O59_05440 PF08529 NusA N-terminal domain C1O59_05440 PF13184 NusA-like KH domain C1O59_05440 PF00575 S1 RNA binding domain C1O59_05445 PF03372 Endonuclease/Exonuclease/phosphatase family C1O59_05450 PF01725 Ham1 family C1O59_05455 PF06962 Putative rRNA methylase C1O59_05460 PF04015 Domain of unknown function (DUF362) C1O59_05475 PF00005 ABC transporter C1O59_05475 PF00498 FHA domain C1O59_05475 PF01061 ABC-2 type transporter C1O59_05500 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C1O59_05505 PF02397 Bacterial sugar transferase C1O59_05510 PF08544 GHMP kinases C terminal C1O59_05510 PF10509 Galactokinase galactose-binding signature C1O59_05510 PF00288 GHMP kinases N terminal domain C1O59_05515 PF00474 Sodium:solute symporter family C1O59_05520 PF13361 UvrD-like helicase C-terminal domain C1O59_05520 PF00580 UvrD/REP helicase N-terminal domain C1O59_05525 PF02911 Formyl transferase, C-terminal domain C1O59_05525 PF00551 Formyl transferase C1O59_05535 PF03309 Type III pantothenate kinase C1O59_05540 PF00550 Phosphopantetheine attachment site C1O59_05555 PF02580 D-Tyr-tRNA(Tyr) deacylase C1O59_05570 PF13085 2Fe-2S iron-sulfur cluster binding domain C1O59_05575 PF00890 FAD binding domain C1O59_05575 PF02910 Fumarate reductase flavoprotein C-term C1O59_05635 PF12848 ABC transporter C1O59_05635 PF16326 ABC transporter C-terminal domain C1O59_05635 PF00005 ABC transporter C1O59_05645 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C1O59_05645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1O59_05655 PF00571 CBS domain C1O59_05655 PF03471 Transporter associated domain C1O59_05655 PF01595 Cyclin M transmembrane N-terminal domain C1O59_05670 PF12146 Serine aminopeptidase, S33 C1O59_05680 PF00248 Aldo/keto reductase family C1O59_05690 PF17137 Domain of unknown function (DUF5110) C1O59_05690 PF13802 Galactose mutarotase-like C1O59_05690 PF01055 Glycosyl hydrolases family 31 C1O59_05690 PF16338 Domain of unknown function (DUF4968) C1O59_05710 PF04397 LytTr DNA-binding domain C1O59_05710 PF00072 Response regulator receiver domain C1O59_05745 PF00561 alpha/beta hydrolase fold C1O59_05750 PF01914 MarC family integral membrane protein C1O59_05780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1O59_05785 PF12848 ABC transporter C1O59_05785 PF16326 ABC transporter C-terminal domain C1O59_05785 PF00005 ABC transporter C1O59_05830 PF01555 DNA methylase C1O59_05860 PF01406 tRNA synthetases class I (C) catalytic domain C1O59_05860 PF09190 DALR domain C1O59_05865 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_05865 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_05870 PF00884 Sulfatase C1O59_05870 PF16347 Domain of unknown function (DUF4976) C1O59_05880 PF00009 Elongation factor Tu GTP binding domain C1O59_05880 PF00679 Elongation factor G C-terminus C1O59_05880 PF03144 Elongation factor Tu domain 2 C1O59_05880 PF06421 GTP-binding protein LepA C-terminus C1O59_05910 PF04998 RNA polymerase Rpb1, domain 5 C1O59_05910 PF04983 RNA polymerase Rpb1, domain 3 C1O59_05910 PF04997 RNA polymerase Rpb1, domain 1 C1O59_05910 PF05000 RNA polymerase Rpb1, domain 4 C1O59_05910 PF00623 RNA polymerase Rpb1, domain 2 C1O59_05915 PF04560 RNA polymerase Rpb2, domain 7 C1O59_05915 PF04565 RNA polymerase Rpb2, domain 3 C1O59_05915 PF04563 RNA polymerase beta subunit C1O59_05915 PF04561 RNA polymerase Rpb2, domain 2 C1O59_05915 PF00562 RNA polymerase Rpb2, domain 6 C1O59_05915 PF10385 RNA polymerase beta subunit external 1 domain C1O59_05920 PF16320 Ribosomal protein L7/L12 dimerisation domain C1O59_05920 PF00542 Ribosomal protein L7/L12 C-terminal domain C1O59_05925 PF00466 Ribosomal protein L10 C1O59_05930 PF00687 Ribosomal protein L1p/L10e family C1O59_05935 PF03946 Ribosomal protein L11, N-terminal domain C1O59_05935 PF00298 Ribosomal protein L11, RNA binding domain C1O59_05940 PF02357 Transcription termination factor nusG C1O59_05940 PF00467 KOW motif C1O59_05955 PF03143 Elongation factor Tu C-terminal domain C1O59_05955 PF00009 Elongation factor Tu GTP binding domain C1O59_05955 PF03144 Elongation factor Tu domain 2 C1O59_05965 PF00814 Glycoprotease family C1O59_05970 PF06689 ClpX C4-type zinc finger C1O59_05970 PF10431 C-terminal, D2-small domain, of ClpB protein C1O59_05970 PF07724 AAA domain (Cdc48 subfamily) C1O59_05975 PF00574 Clp protease C1O59_05980 PF05698 Bacterial trigger factor protein (TF) C-terminus C1O59_05980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1O59_05980 PF05697 Bacterial trigger factor protein (TF) C1O59_05985 PF01103 Surface antigen C1O59_05985 PF07244 Surface antigen variable number repeat C1O59_05995 PF02219 Methylenetetrahydrofolate reductase C1O59_06015 PF00873 AcrB/AcrD/AcrF family C1O59_06060 PF13649 Methyltransferase domain C1O59_06065 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1O59_06065 PF02772 S-adenosylmethionine synthetase, central domain C1O59_06065 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1O59_06070 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1O59_06070 PF05221 S-adenosyl-L-homocysteine hydrolase C1O59_06090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1O59_06100 PF00884 Sulfatase C1O59_06100 PF16347 Domain of unknown function (DUF4976) C1O59_06105 PF00270 DEAD/DEAH box helicase C1O59_06105 PF16124 RecQ zinc-binding C1O59_06105 PF00570 HRDC domain C1O59_06105 PF09382 RQC domain C1O59_06105 PF00271 Helicase conserved C-terminal domain C1O59_06120 PF00534 Glycosyl transferases group 1 C1O59_06130 PF02910 Fumarate reductase flavoprotein C-term C1O59_06130 PF00890 FAD binding domain C1O59_06135 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1O59_06135 PF00588 SpoU rRNA Methylase family C1O59_06185 PF07664 Ferrous iron transport protein B C terminus C1O59_06185 PF17910 FeoB cytosolic helical domain C1O59_06185 PF02421 Ferrous iron transport protein B C1O59_06185 PF07670 Nucleoside recognition C1O59_06200 PF03150 Di-haem cytochrome c peroxidase C1O59_06200 PF14376 Haem-binding domain C1O59_06200 PF00034 Cytochrome c C1O59_06205 PF04055 Radical SAM superfamily C1O59_06205 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1O59_06210 PF14437 MafB19-like deaminase C1O59_06215 PF00480 ROK family C1O59_06220 PF00403 Heavy-metal-associated domain C1O59_06225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O59_06225 PF07498 Rho termination factor, N-terminal domain C1O59_06225 PF07497 Rho termination factor, RNA-binding domain C1O59_06230 PF03958 Bacterial type II/III secretion system short domain C1O59_06230 PF00263 Bacterial type II and III secretion system protein C1O59_06255 PF05343 M42 glutamyl aminopeptidase C1O59_06260 PF01790 Prolipoprotein diacylglyceryl transferase C1O59_06270 PF05195 Aminopeptidase P, N-terminal domain C1O59_06270 PF00557 Metallopeptidase family M24 C1O59_06275 PF08029 HisG, C-terminal domain C1O59_06275 PF01634 ATP phosphoribosyltransferase C1O59_06300 PF00989 PAS fold C1O59_06300 PF00512 His Kinase A (phospho-acceptor) domain C1O59_06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_06300 PF11808 Phosphate regulon sensor protein PhoR C1O59_06305 PF00072 Response regulator receiver domain C1O59_06305 PF00486 Transcriptional regulatory protein, C terminal C1O59_06310 PF00920 Dehydratase family C1O59_06335 PF00884 Sulfatase C1O59_06375 PF01370 NAD dependent epimerase/dehydratase family C1O59_06380 PF00398 Ribosomal RNA adenine dimethylase C1O59_06400 PF01554 MatE C1O59_06405 PF02386 Cation transport protein C1O59_06420 PF13539 D-alanyl-D-alanine carboxypeptidase C1O59_06540 PF03814 Potassium-transporting ATPase A subunit C1O59_06550 PF02669 K+-transporting ATPase, c chain C1O59_06555 PF13492 GAF domain C1O59_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_06555 PF00512 His Kinase A (phospho-acceptor) domain C1O59_06555 PF02702 Osmosensitive K+ channel His kinase sensor domain C1O59_06555 PF13493 Domain of unknown function (DUF4118) C1O59_06565 PF12867 DinB superfamily C1O59_06565 PF03781 Sulfatase-modifying factor enzyme 1 C1O59_06575 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1O59_06575 PF00753 Metallo-beta-lactamase superfamily C1O59_06585 PF00069 Protein kinase domain C1O59_06585 PF03793 PASTA domain C1O59_06595 PF13411 MerR HTH family regulatory protein C1O59_06605 PF01212 Beta-eliminating lyase C1O59_06635 PF00005 ABC transporter C1O59_06645 PF17863 AAA lid domain C1O59_06645 PF07726 ATPase family associated with various cellular activities (AAA) C1O59_06650 PF04235 Protein of unknown function (DUF418) C1O59_06670 PF01370 NAD dependent epimerase/dehydratase family C1O59_06670 PF08338 Domain of unknown function (DUF1731) C1O59_06685 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1O59_06685 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1O59_06690 PF00005 ABC transporter C1O59_06695 PF07729 FCD domain C1O59_06695 PF00392 Bacterial regulatory proteins, gntR family C1O59_06710 PF00884 Sulfatase C1O59_06720 PF00113 Enolase, C-terminal TIM barrel domain C1O59_06720 PF03952 Enolase, N-terminal domain C1O59_06735 PF02424 ApbE family C1O59_06750 PF00830 Ribosomal L28 family C1O59_06765 PF03652 Holliday junction resolvase C1O59_06770 PF01050 Mannose-6-phosphate isomerase C1O59_06770 PF00483 Nucleotidyl transferase C1O59_06775 PF01255 Putative undecaprenyl diphosphate synthase C1O59_06780 PF00204 DNA gyrase B C1O59_06780 PF01751 Toprim domain C1O59_06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_06780 PF00986 DNA gyrase B subunit, carboxyl terminus C1O59_06785 PF00288 GHMP kinases N terminal domain C1O59_06785 PF08544 GHMP kinases C terminal C1O59_06795 PF06733 DEAD_2 C1O59_06795 PF13307 Helicase C-terminal domain C1O59_06800 PF00005 ABC transporter C1O59_06825 PF00696 Amino acid kinase family C1O59_06830 PF01544 CorA-like Mg2+ transporter protein C1O59_06835 PF03948 Ribosomal protein L9, C-terminal domain C1O59_06835 PF01281 Ribosomal protein L9, N-terminal domain C1O59_06840 PF01808 AICARFT/IMPCHase bienzyme C1O59_06840 PF02142 MGS-like domain C1O59_06845 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1O59_06850 PF01648 4'-phosphopantetheinyl transferase superfamily C1O59_06860 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C1O59_06860 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C1O59_06865 PF01510 N-acetylmuramoyl-L-alanine amidase C1O59_06865 PF01476 LysM domain C1O59_06865 PF01471 Putative peptidoglycan binding domain C1O59_06870 PF00271 Helicase conserved C-terminal domain C1O59_06870 PF00270 DEAD/DEAH box helicase C1O59_06870 PF17191 RecG wedge domain C1O59_06880 PF13247 4Fe-4S dicluster domain C1O59_06880 PF00037 4Fe-4S binding domain C1O59_06890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O59_06900 PF01761 3-dehydroquinate synthase C1O59_06955 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1O59_06965 PF02833 DHHA2 domain C1O59_06965 PF07085 DRTGG domain C1O59_06965 PF01368 DHH family C1O59_06965 PF00571 CBS domain C1O59_06975 PF02575 YbaB/EbfC DNA-binding family C1O59_06980 PF12169 DNA polymerase III subunits gamma and tau domain III C1O59_07000 PF04002 RadC-like JAB domain C1O59_07005 PF03853 YjeF-related protein N-terminus C1O59_07005 PF01256 Carbohydrate kinase C1O59_07010 PF01176 Translation initiation factor 1A / IF-1 C1O59_07015 PF00572 Ribosomal protein L13 C1O59_07020 PF00380 Ribosomal protein S9/S16 C1O59_07025 PF02590 Predicted SPOUT methyltransferase C1O59_07030 PF08459 UvrC Helix-hairpin-helix N-terminal C1O59_07030 PF01541 GIY-YIG catalytic domain C1O59_07030 PF02151 UvrB/uvrC motif C1O59_07035 PF01618 MotA/TolQ/ExbB proton channel family C1O59_07040 PF02472 Biopolymer transport protein ExbD/TolR C1O59_07050 PF00912 Transglycosylase C1O59_07050 PF17092 Penicillin-binding protein OB-like domain C1O59_07050 PF00905 Penicillin binding protein transpeptidase domain C1O59_07055 PF00459 Inositol monophosphatase family C1O59_07060 PF02542 YgbB family C1O59_07070 PF01238 Phosphomannose isomerase type I C1O59_07080 PF03553 Na+/H+ antiporter family C1O59_07085 PF01370 NAD dependent epimerase/dehydratase family C1O59_07090 PF16363 GDP-mannose 4,6 dehydratase C1O59_07095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1O59_07095 PF00117 Glutamine amidotransferase class-I C1O59_07100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O59_07100 PF02142 MGS-like domain C1O59_07100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1O59_07105 PF00120 Glutamine synthetase, catalytic domain C1O59_07105 PF12437 Glutamine synthetase type III N terminal C1O59_07105 PF18318 Glutamine synthetase C-terminal domain C1O59_07110 PF00310 Glutamine amidotransferases class-II C1O59_07110 PF01645 Conserved region in glutamate synthase C1O59_07110 PF01493 GXGXG motif C1O59_07110 PF04898 Glutamate synthase central domain C1O59_07115 PF14849 YidC periplasmic domain C1O59_07115 PF02096 60Kd inner membrane protein C1O59_07120 PF01809 Putative membrane protein insertion efficiency factor C1O59_07125 PF00825 Ribonuclease P C1O59_07130 PF00468 Ribosomal protein L34 C1O59_07140 PF07859 alpha/beta hydrolase fold C1O59_07140 PF13472 GDSL-like Lipase/Acylhydrolase family C1O59_07150 PF01263 Aldose 1-epimerase C1O59_07160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1O59_07160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1O59_07165 PF00348 Polyprenyl synthetase C1O59_07170 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O59_07170 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1O59_07190 PF03315 Serine dehydratase beta chain C1O59_07190 PF03313 Serine dehydratase alpha chain C1O59_07195 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O59_07195 PF00085 Thioredoxin C1O59_07240 PF02254 TrkA-N domain C1O59_07240 PF00999 Sodium/hydrogen exchanger family C1O59_07245 PF00149 Calcineurin-like phosphoesterase C1O59_07250 PF02073 Thermophilic metalloprotease (M29) C1O59_07255 PF00551 Formyl transferase C1O59_07260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1O59_07260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1O59_07275 PF00204 DNA gyrase B C1O59_07275 PF00986 DNA gyrase B subunit, carboxyl terminus C1O59_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_07275 PF01751 Toprim domain C1O59_07280 PF03989 DNA gyrase C-terminal domain, beta-propeller C1O59_07280 PF00521 DNA gyrase/topoisomerase IV, subunit A C1O59_07290 PF01136 Peptidase family U32 C1O59_07300 PF03781 Sulfatase-modifying factor enzyme 1 C1O59_07320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1O59_07320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1O59_07325 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_07330 PF00005 ABC transporter C1O59_07340 PF00009 Elongation factor Tu GTP binding domain C1O59_07345 PF01507 Phosphoadenosine phosphosulfate reductase family C1O59_07350 PF01507 Phosphoadenosine phosphosulfate reductase family C1O59_07355 PF00291 Pyridoxal-phosphate dependent enzyme C1O59_07360 PF01895 PhoU domain C1O59_07365 PF00005 ABC transporter C1O59_07370 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_07375 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_07380 PF12849 PBP superfamily domain C1O59_07385 PF00005 ABC transporter C1O59_07395 PF01263 Aldose 1-epimerase C1O59_07410 PF00675 Insulinase (Peptidase family M16) C1O59_07410 PF05193 Peptidase M16 inactive domain C1O59_07415 PF02311 AraC-like ligand binding domain C1O59_07415 PF12833 Helix-turn-helix domain C1O59_07425 PF00132 Bacterial transferase hexapeptide (six repeats) C1O59_07425 PF12464 Maltose acetyltransferase C1O59_07425 PF14602 Hexapeptide repeat of succinyl-transferase C1O59_07455 PF01765 Ribosome recycling factor C1O59_07460 PF00696 Amino acid kinase family C1O59_07465 PF05552 Conserved TM helix C1O59_07465 PF00924 Mechanosensitive ion channel C1O59_07475 PF00578 AhpC/TSA family C1O59_07475 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1O59_07480 PF00209 Sodium:neurotransmitter symporter family C1O59_07505 PF00109 Beta-ketoacyl synthase, N-terminal domain C1O59_07505 PF02801 Beta-ketoacyl synthase, C-terminal domain C1O59_07510 PF01641 SelR domain C1O59_07515 PF00817 impB/mucB/samB family C1O59_07515 PF11799 impB/mucB/samB family C-terminal domain C1O59_07545 PF00005 ABC transporter C1O59_07550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O59_07555 PF01411 tRNA synthetases class II (A) C1O59_07555 PF02272 DHHA1 domain C1O59_07555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1O59_07560 PF01066 CDP-alcohol phosphatidyltransferase C1O59_07570 PF00809 Pterin binding enzyme C1O59_07580 PF04551 GcpE protein C1O59_07605 PF02801 Beta-ketoacyl synthase, C-terminal domain C1O59_07605 PF00109 Beta-ketoacyl synthase, N-terminal domain C1O59_07610 PF00155 Aminotransferase class I and II C1O59_07635 PF01336 OB-fold nucleic acid binding domain C1O59_07635 PF00152 tRNA synthetases class II (D, K and N) C1O59_07635 PF02938 GAD domain C1O59_07640 PF13393 Histidyl-tRNA synthetase C1O59_07640 PF03129 Anticodon binding domain C1O59_07645 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1O59_07650 PF00708 Acylphosphatase C1O59_07650 PF17788 HypF Kae1-like domain C1O59_07650 PF07503 HypF finger C1O59_07650 PF01300 Telomere recombination C1O59_07655 PF01455 HupF/HypC family C1O59_07660 PF01924 Hydrogenase formation hypA family C1O59_07665 PF02769 AIR synthase related protein, C-terminal domain C1O59_07665 PF00586 AIR synthase related protein, N-terminal domain C1O59_07685 PF00012 Hsp70 protein C1O59_07690 PF00166 Chaperonin 10 Kd subunit C1O59_07695 PF00118 TCP-1/cpn60 chaperonin family C1O59_07730 PF13807 G-rich domain on putative tyrosine kinase C1O59_07730 PF13614 AAA domain C1O59_07730 PF02706 Chain length determinant protein C1O59_07745 PF07499 RuvA, C-terminal domain C1O59_07745 PF01330 RuvA N terminal domain C1O59_07750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1O59_07750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1O59_07755 PF00162 Phosphoglycerate kinase C1O59_07770 PF10566 Glycoside hydrolase 97 C1O59_07770 PF14508 Glycosyl-hydrolase 97 N-terminal C1O59_07770 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation C1O59_07780 PF01555 DNA methylase C1O59_07790 PF02559 CarD-like/TRCF domain C1O59_07790 PF00270 DEAD/DEAH box helicase C1O59_07790 PF00271 Helicase conserved C-terminal domain C1O59_07790 PF03461 TRCF domain C1O59_07790 PF17757 UvrB interaction domain C1O59_07800 PF07690 Major Facilitator Superfamily C1O59_07815 PF02811 PHP domain C1O59_07820 PF07085 DRTGG domain C1O59_07820 PF01515 Phosphate acetyl/butaryl transferase C1O59_07825 PF01171 PP-loop family C1O59_07825 PF11734 TilS substrate C-terminal domain C1O59_07830 PF01197 Ribosomal protein L31 C1O59_07865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1O59_07865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1O59_07865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1O59_07870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1O59_07870 PF00056 lactate/malate dehydrogenase, NAD binding domain C1O59_07895 PF00881 Nitroreductase family C1O59_07900 PF00849 RNA pseudouridylate synthase C1O59_07900 PF01479 S4 domain C1O59_07905 PF00849 RNA pseudouridylate synthase C1O59_07905 PF01479 S4 domain C1O59_07925 PF00005 ABC transporter C1O59_07930 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_07940 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1O59_07940 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O59_07945 PF01960 ArgJ family C1O59_07965 PF17760 UvrA interaction domain C1O59_07965 PF17755 UvrA DNA-binding domain C1O59_07995 PF02594 Uncharacterised ACR, YggU family COG1872 C1O59_08000 PF01025 GrpE C1O59_08005 PF00226 DnaJ domain C1O59_08005 PF01556 DnaJ C terminal domain C1O59_08005 PF00684 DnaJ central domain C1O59_08010 PF04452 RNA methyltransferase C1O59_08020 PF13229 Right handed beta helix region C1O59_08030 PF10502 Signal peptidase, peptidase S26 C1O59_08035 PF02913 FAD linked oxidases, C-terminal domain C1O59_08035 PF01565 FAD binding domain C1O59_08060 PF14572 Phosphoribosyl synthetase-associated domain C1O59_08060 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1O59_08065 PF14693 Ribosomal protein TL5, C-terminal domain C1O59_08065 PF01386 Ribosomal L25p family C1O59_08080 PF00475 Imidazoleglycerol-phosphate dehydratase C1O59_08085 PF00117 Glutamine amidotransferase class-I C1O59_08090 PF01250 Ribosomal protein S6 C1O59_08100 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C1O59_08115 PF07943 Penicillin-binding protein 5, C-terminal domain C1O59_08115 PF00768 D-alanyl-D-alanine carboxypeptidase C1O59_08120 PF00365 Phosphofructokinase C1O59_08130 PF02535 ZIP Zinc transporter C1O59_08145 PF00155 Aminotransferase class I and II C1O59_08150 PF03755 YicC-like family, N-terminal region C1O59_08150 PF08340 Domain of unknown function (DUF1732) C1O59_08155 PF00625 Guanylate kinase C1O59_08160 PF02080 TrkA-C domain C1O59_08160 PF03600 Citrate transporter C1O59_08165 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O59_08180 PF01040 UbiA prenyltransferase family C1O59_08215 PF01522 Polysaccharide deacetylase C1O59_08215 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain C1O59_08220 PF02355 Protein export membrane protein C1O59_08220 PF07549 SecD/SecF GG Motif C1O59_08240 PF01478 Type IV leader peptidase family C1O59_08240 PF06750 Bacterial Peptidase A24 N-terminal domain C1O59_08250 PF01000 RNA polymerase Rpb3/RpoA insert domain C1O59_08250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1O59_08250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1O59_08255 PF01196 Ribosomal protein L17 C1O59_08260 PF00698 Acyl transferase domain C1O59_08265 PF13419 Haloacid dehalogenase-like hydrolase C1O59_08280 PF00691 OmpA family C1O59_08340 PF00248 Aldo/keto reductase family C1O59_08345 PF03030 Inorganic H+ pyrophosphatase C1O59_08365 PF04715 Anthranilate synthase component I, N terminal region C1O59_08365 PF00425 chorismate binding enzyme C1O59_08370 PF00591 Glycosyl transferase family, a/b domain C1O59_08370 PF02885 Glycosyl transferase family, helical bundle domain C1O59_08375 PF00218 Indole-3-glycerol phosphate synthase C1O59_08380 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1O59_08385 PF00291 Pyridoxal-phosphate dependent enzyme C1O59_08390 PF00290 Tryptophan synthase alpha chain C1O59_08395 PF12951 Passenger-associated-transport-repeat C1O59_08405 PF00561 alpha/beta hydrolase fold C1O59_08410 PF00444 Ribosomal protein L36 C1O59_08420 PF04055 Radical SAM superfamily C1O59_08425 PF01228 Glycine radical C1O59_08425 PF02901 Pyruvate formate lyase-like C1O59_08465 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1O59_08470 PF07690 Major Facilitator Superfamily C1O59_08490 PF02151 UvrB/uvrC motif C1O59_08490 PF00271 Helicase conserved C-terminal domain C1O59_08490 PF17757 UvrB interaction domain C1O59_08490 PF04851 Type III restriction enzyme, res subunit C1O59_08490 PF12344 Ultra-violet resistance protein B C1O59_08495 PF01632 Ribosomal protein L35 C1O59_08500 PF00453 Ribosomal protein L20 C1O59_08505 PF02163 Peptidase family M50 C1O59_08505 PF17820 PDZ domain C1O59_08520 PF12705 PD-(D/E)XK nuclease superfamily C1O59_08520 PF13361 UvrD-like helicase C-terminal domain C1O59_08520 PF00580 UvrD/REP helicase N-terminal domain C1O59_08530 PF00892 EamA-like transporter family C1O59_08535 PF07678 A-macroglobulin TED domain C1O59_08535 PF01835 MG2 domain C1O59_08535 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C1O59_08535 PF07703 Alpha-2-macroglobulin bait region domain C1O59_08535 PF00207 Alpha-2-macroglobulin family C1O59_08555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1O59_08555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1O59_08580 PF00285 Citrate synthase, C-terminal domain C1O59_08590 PF00588 SpoU rRNA Methylase family C1O59_08600 PF01668 SmpB protein C1O59_08610 PF00849 RNA pseudouridylate synthase C1O59_08620 PF00334 Nucleoside diphosphate kinase C1O59_08625 PF00535 Glycosyl transferase family 2 C1O59_08630 PF00535 Glycosyl transferase family 2 C1O59_08640 PF00482 Type II secretion system (T2SS), protein F C1O59_08645 PF00437 Type II/IV secretion system protein C1O59_08655 PF01207 Dihydrouridine synthase (Dus) C1O59_08665 PF00155 Aminotransferase class I and II C1O59_08670 PF03023 Lipid II flippase MurJ C1O59_08675 PF00294 pfkB family carbohydrate kinase C1O59_08675 PF01467 Cytidylyltransferase-like C1O59_08680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1O59_08680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1O59_08690 PF02638 Glycosyl hydrolase-like 10 C1O59_08695 PF00731 AIR carboxylase C1O59_08700 PF02540 NAD synthase C1O59_08705 PF01969 Protein of unknown function DUF111 C1O59_08710 PF00348 Polyprenyl synthetase C1O59_08715 PF00854 POT family C1O59_08725 PF01883 Iron-sulfur cluster assembly protein C1O59_08740 PF00361 Proton-conducting membrane transporter C1O59_08745 PF00361 Proton-conducting membrane transporter C1O59_08750 PF00361 Proton-conducting membrane transporter C1O59_08750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1O59_08755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1O59_08760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C1O59_08775 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C1O59_08775 PF01568 Molydopterin dinucleotide binding domain C1O59_08775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1O59_08775 PF00384 Molybdopterin oxidoreductase C1O59_08780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1O59_08780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1O59_08780 PF10531 SLBB domain C1O59_08790 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C1O59_08800 PF01522 Polysaccharide deacetylase C1O59_08810 PF00677 Lumazine binding domain C1O59_08825 PF03797 Autotransporter beta-domain C1O59_08825 PF07548 Chlamydia polymorphic membrane protein middle domain C1O59_08825 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1O59_08835 PF02446 4-alpha-glucanotransferase C1O59_08845 PF00919 Uncharacterized protein family UPF0004 C1O59_08845 PF18693 TRAM domain C1O59_08845 PF04055 Radical SAM superfamily C1O59_08850 PF01972 Serine dehydrogenase proteinase C1O59_08850 PF01957 NfeD-like C-terminal, partner-binding C1O59_08855 PF08275 DNA primase catalytic core, N-terminal domain C1O59_08855 PF10410 DnaB-helicase binding domain of primase C1O59_08855 PF01807 CHC2 zinc finger C1O59_08860 PF04545 Sigma-70, region 4 C1O59_08860 PF04539 Sigma-70 region 3 C1O59_08860 PF03979 Sigma-70 factor, region 1.1 C1O59_08860 PF00140 Sigma-70 factor, region 1.2 C1O59_08860 PF04542 Sigma-70 region 2 C1O59_08865 PF01427 D-ala-D-ala dipeptidase C1O59_08880 PF00464 Serine hydroxymethyltransferase C1O59_08885 PF11818 C-terminal domain of tail specific protease (DUF3340) C1O59_08885 PF03572 Peptidase family S41 C1O59_08885 PF00595 PDZ domain C1O59_08885 PF17804 Tail specific protease N-terminal domain C1O59_08900 PF08482 ATP-dependent helicase C-terminal C1O59_08900 PF00271 Helicase conserved C-terminal domain C1O59_08900 PF04408 Helicase associated domain (HA2) C1O59_08900 PF00270 DEAD/DEAH box helicase C1O59_08915 PF01743 Poly A polymerase head domain C1O59_08915 PF12627 Probable RNA and SrmB- binding site of polymerase A C1O59_08915 PF13735 tRNA nucleotidyltransferase domain 2 putative C1O59_08925 PF00263 Bacterial type II and III secretion system protein C1O59_08925 PF03958 Bacterial type II/III secretion system short domain C1O59_08940 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1O59_08940 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1O59_08960 PF01207 Dihydrouridine synthase (Dus) C1O59_08965 PF02401 LytB protein C1O59_08975 PF01649 Ribosomal protein S20 C1O59_08980 PF13419 Haloacid dehalogenase-like hydrolase C1O59_08985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O59_08985 PF00205 Thiamine pyrophosphate enzyme, central domain C1O59_08985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1O59_08995 PF02666 Phosphatidylserine decarboxylase C1O59_09000 PF00834 Ribulose-phosphate 3 epimerase family C1O59_09005 PF08264 Anticodon-binding domain of tRNA C1O59_09005 PF00133 tRNA synthetases class I (I, L, M and V) C1O59_09005 PF09334 tRNA synthetases class I (M) C1O59_09005 PF13603 Leucyl-tRNA synthetase, Domain 2 C1O59_09010 PF00884 Sulfatase C1O59_09020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1O59_09025 PF17810 Arginine decarboxylase helical bundle domain C1O59_09025 PF17944 Arginine decarboxylase C-terminal helical extension C1O59_09025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1O59_09040 PF16353 Domain of unknown function(DUF4981) C1O59_09040 PF02929 Beta galactosidase small chain C1O59_09040 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O59_09040 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O59_09040 PF00703 Glycosyl hydrolases family 2 C1O59_09045 PF00703 Glycosyl hydrolases family 2 C1O59_09045 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O59_09045 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O59_09050 PF00004 ATPase family associated with various cellular activities (AAA) C1O59_09050 PF16193 AAA C-terminal domain C1O59_09050 PF12002 MgsA AAA+ ATPase C terminal C1O59_09055 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_09055 PF07691 PA14 domain C1O59_09055 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_09070 PF00365 Phosphofructokinase C1O59_09085 PF04055 Radical SAM superfamily C1O59_09085 PF13186 Iron-sulfur cluster-binding domain C1O59_09085 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C1O59_09120 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C1O59_09130 PF02654 Cobalamin-5-phosphate synthase C1O59_09135 PF02277 Phosphoribosyltransferase C1O59_09140 PF03186 CobD/Cbib protein C1O59_09145 PF00155 Aminotransferase class I and II C1O59_09145 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1O59_09145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1O59_09155 PF07715 TonB-dependent Receptor Plug Domain C1O59_09155 PF00593 TonB dependent receptor C1O59_09165 PF01301 Glycosyl hydrolases family 35 C1O59_09175 PF01979 Amidohydrolase family C1O59_09180 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O59_09180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1O59_09190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O59_09190 PF00364 Biotin-requiring enzyme C1O59_09190 PF02817 e3 binding domain C1O59_09195 PF02779 Transketolase, pyrimidine binding domain C1O59_09195 PF16078 2-oxoglutarate dehydrogenase N-terminus C1O59_09195 PF16870 2-oxoglutarate dehydrogenase C-terminal C1O59_09195 PF00676 Dehydrogenase E1 component C1O59_09200 PF02322 Cytochrome bd terminal oxidase subunit II C1O59_09205 PF01654 Cytochrome bd terminal oxidase subunit I C1O59_09215 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1O59_09230 PF00291 Pyridoxal-phosphate dependent enzyme C1O59_09235 PF01047 MarR family C1O59_09240 PF00210 Ferritin-like domain C1O59_09260 PF02698 DUF218 domain C1O59_09290 PF00270 DEAD/DEAH box helicase C1O59_09290 PF00271 Helicase conserved C-terminal domain C1O59_09290 PF16124 RecQ zinc-binding C1O59_09290 PF00570 HRDC domain C1O59_09290 PF09382 RQC domain C1O59_09305 PF00549 CoA-ligase C1O59_09305 PF02629 CoA binding domain C1O59_09310 PF08442 ATP-grasp domain C1O59_09310 PF00549 CoA-ligase C1O59_09350 PF13742 OB-fold nucleic acid binding domain C1O59_09350 PF02601 Exonuclease VII, large subunit C1O59_09355 PF00501 AMP-binding enzyme C1O59_09355 PF01553 Acyltransferase C1O59_09385 PF01370 NAD dependent epimerase/dehydratase family C1O59_09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_09390 PF00672 HAMP domain C1O59_09390 PF00512 His Kinase A (phospho-acceptor) domain C1O59_09395 PF00072 Response regulator receiver domain C1O59_09395 PF00486 Transcriptional regulatory protein, C terminal C1O59_09405 PF00490 Delta-aminolevulinic acid dehydratase C1O59_09415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O59_09415 PF03129 Anticodon binding domain C1O59_09415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1O59_09415 PF02824 TGS domain C1O59_09420 PF05198 Translation initiation factor IF-3, N-terminal domain C1O59_09420 PF00707 Translation initiation factor IF-3, C-terminal domain C1O59_09430 PF07786 Protein of unknown function (DUF1624) C1O59_09430 PF04235 Protein of unknown function (DUF418) C1O59_09435 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1O59_09435 PF13288 DXP reductoisomerase C-terminal domain C1O59_09435 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1O59_09445 PF01467 Cytidylyltransferase-like C1O59_09480 PF04991 LicD family C1O59_09485 PF01467 Cytidylyltransferase-like C1O59_09495 PF00155 Aminotransferase class I and II C1O59_09500 PF04991 LicD family C1O59_09505 PF00128 Alpha amylase, catalytic domain C1O59_09505 PF02806 Alpha amylase, C-terminal all-beta domain C1O59_09505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1O59_09515 PF02657 Fe-S metabolism associated domain C1O59_09520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1O59_09520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1O59_09525 PF00884 Sulfatase C1O59_09530 PF00391 PEP-utilising enzyme, mobile domain C1O59_09530 PF05524 PEP-utilising enzyme, N-terminal C1O59_09530 PF02896 PEP-utilising enzyme, TIM barrel domain C1O59_09535 PF00381 PTS HPr component phosphorylation site C1O59_09540 PF02603 HPr Serine kinase N terminus C1O59_09540 PF07475 HPr Serine kinase C-terminal domain C1O59_09545 PF01546 Peptidase family M20/M25/M40 C1O59_09545 PF07687 Peptidase dimerisation domain C1O59_09550 PF00005 ABC transporter C1O59_09580 PF00535 Glycosyl transferase family 2 C1O59_09595 PF07728 AAA domain (dynein-related subfamily) C1O59_09595 PF12102 Domain of unknown function (DUF3578) C1O59_09595 PF07728 AAA domain (dynein-related subfamily) C1O59_09595 PF12102 Domain of unknown function (DUF3578) C1O59_09605 PF00176 SNF2 family N-terminal domain C1O59_09605 PF00271 Helicase conserved C-terminal domain C1O59_09605 PF04434 SWIM zinc finger C1O59_09610 PF01037 Lrp/AsnC ligand binding domain C1O59_09615 PF00155 Aminotransferase class I and II C1O59_09630 PF03129 Anticodon binding domain C1O59_09630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O59_09635 PF00248 Aldo/keto reductase family C1O59_09650 PF13519 von Willebrand factor type A domain C1O59_09665 PF17863 AAA lid domain C1O59_09665 PF07726 ATPase family associated with various cellular activities (AAA) C1O59_09670 PF01425 Amidase C1O59_09675 PF02686 Glu-tRNAGln amidotransferase C subunit C1O59_09715 PF13180 PDZ domain C1O59_09720 PF13180 PDZ domain C1O59_09750 PF00155 Aminotransferase class I and II C1O59_09760 PF00248 Aldo/keto reductase family C1O59_09765 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1O59_09770 PF00248 Aldo/keto reductase family C1O59_09775 PF00149 Calcineurin-like phosphoesterase C1O59_09795 PF02525 Flavodoxin-like fold C1O59_09800 PF13411 MerR HTH family regulatory protein C1O59_09810 PF00128 Alpha amylase, catalytic domain C1O59_09810 PF09154 Domain of unknown function (DUF1939) C1O59_09815 PF01554 MatE C1O59_09825 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_09825 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_09840 PF04321 RmlD substrate binding domain C1O59_09845 PF17785 PUA-like domain C1O59_09845 PF10672 S-adenosylmethionine-dependent methyltransferase C1O59_09865 PF10672 S-adenosylmethionine-dependent methyltransferase C1O59_09865 PF17785 PUA-like domain C1O59_09870 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1O59_09870 PF02585 GlcNAc-PI de-N-acetylase C1O59_09885 PF01479 S4 domain C1O59_09885 PF01728 FtsJ-like methyltransferase C1O59_09895 PF17954 Quercetinase C-terminal cupin domain C1O59_09895 PF02678 Pirin C1O59_09915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1O59_09915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1O59_09925 PF02952 L-fucose isomerase, C-terminal domain C1O59_09925 PF07882 L-fucose isomerase, second N-terminal domain C1O59_09925 PF07881 L-fucose isomerase, first N-terminal domain C1O59_09930 PF07690 Major Facilitator Superfamily C1O59_09940 PF13859 BNR repeat-like domain C1O59_09940 PF14873 N-terminal domain of BNR-repeat neuraminidase C1O59_09945 PF04542 Sigma-70 region 2 C1O59_09945 PF08281 Sigma-70, region 4 C1O59_09960 PF02583 Metal-sensitive transcriptional repressor C1O59_09965 PF00403 Heavy-metal-associated domain C1O59_09970 PF01964 Radical SAM ThiC family C1O59_09970 PF13667 ThiC-associated domain C1O59_09990 PF13180 PDZ domain C1O59_09990 PF17820 PDZ domain C1O59_09995 PF01966 HD domain C1O59_09995 PF13286 Phosphohydrolase-associated domain C1O59_10000 PF00892 EamA-like transporter family C1O59_10015 PF01168 Alanine racemase, N-terminal domain C1O59_10015 PF00842 Alanine racemase, C-terminal domain C1O59_10020 PF00005 ABC transporter C1O59_10020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O59_10025 PF00005 ABC transporter C1O59_10025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O59_10030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1O59_10035 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_10035 PF12911 N-terminal TM domain of oligopeptide transport permease C C1O59_10040 PF00528 Binding-protein-dependent transport system inner membrane component C1O59_10055 PF02558 Ketopantoate reductase PanE/ApbA C1O59_10055 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1O59_10060 PF01268 Formate--tetrahydrofolate ligase C1O59_10065 PF06940 Domain of unknown function (DUF1287) C1O59_10070 PF02844 Phosphoribosylglycinamide synthetase, N domain C1O59_10070 PF02843 Phosphoribosylglycinamide synthetase, C domain C1O59_10070 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1O59_10075 PF00436 Single-strand binding protein family C1O59_10085 PF01618 MotA/TolQ/ExbB proton channel family C1O59_10095 PF01327 Polypeptide deformylase C1O59_10105 PF00534 Glycosyl transferases group 1 C1O59_10105 PF13439 Glycosyltransferase Family 4 C1O59_10110 PF17137 Domain of unknown function (DUF5110) C1O59_10110 PF13802 Galactose mutarotase-like C1O59_10110 PF01055 Glycosyl hydrolases family 31 C1O59_10110 PF16338 Domain of unknown function (DUF4968) C1O59_10135 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1O59_10135 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1O59_10140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1O59_10155 PF01757 Acyltransferase family C1O59_10160 PF00180 Isocitrate/isopropylmalate dehydrogenase C1O59_10175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O59_10175 PF10996 Beta-Casp domain C1O59_10175 PF00753 Metallo-beta-lactamase superfamily C1O59_10180 PF02223 Thymidylate kinase C1O59_10185 PF06508 Queuosine biosynthesis protein QueC C1O59_10190 PF14489 QueF-like protein C1O59_10195 PF00924 Mechanosensitive ion channel C1O59_10200 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O59_10205 PF00902 Sec-independent protein translocase protein (TatC) C1O59_10210 PF02673 Bacitracin resistance protein BacA C1O59_10215 PF02673 Bacitracin resistance protein BacA C1O59_10235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1O59_10245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1O59_10250 PF00216 Bacterial DNA-binding protein C1O59_10255 PF01264 Chorismate synthase C1O59_10265 PF00258 Flavodoxin C1O59_10265 PF00175 Oxidoreductase NAD-binding domain C1O59_10265 PF00667 FAD binding domain C1O59_10275 PF00149 Calcineurin-like phosphoesterase C1O59_10295 PF02086 D12 class N6 adenine-specific DNA methyltransferase C1O59_10300 PF00589 Phage integrase family C1O59_10300 PF02899 Phage integrase, N-terminal SAM-like domain C1O59_10320 PF00465 Iron-containing alcohol dehydrogenase C1O59_10325 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1O59_10340 PF07977 FabA-like domain C1O59_10340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1O59_10345 PF00483 Nucleotidyl transferase C1O59_10355 PF00795 Carbon-nitrogen hydrolase C1O59_10370 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_10370 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_10370 PF03173 Putative carbohydrate binding domain C1O59_10370 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1O59_10385 PF01578 Cytochrome C assembly protein C1O59_10395 PF01497 Periplasmic binding protein C1O59_10400 PF00005 ABC transporter C1O59_10405 PF01032 FecCD transport family C1O59_10410 PF01032 FecCD transport family C1O59_10445 PF01612 3'-5' exonuclease C1O59_10445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1O59_10445 PF01367 5'-3' exonuclease, C-terminal SAM fold C1O59_10445 PF00476 DNA polymerase family A C1O59_10460 PF10397 Adenylosuccinate lyase C-terminus C1O59_10460 PF00206 Lyase C1O59_10465 PF07687 Peptidase dimerisation domain C1O59_10465 PF01546 Peptidase family M20/M25/M40 C1O59_10485 PF00701 Dihydrodipicolinate synthetase family C1O59_10500 PF00425 chorismate binding enzyme C1O59_10505 PF00117 Glutamine amidotransferase class-I C1O59_10510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1O59_10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O59_10525 PF04073 Aminoacyl-tRNA editing domain C1O59_10565 PF02574 Homocysteine S-methyltransferase C1O59_10565 PF00809 Pterin binding enzyme C1O59_10565 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1O59_10565 PF02607 B12 binding domain C1O59_10565 PF02310 B12 binding domain C1O59_10570 PF06738 Putative threonine/serine exporter C1O59_10575 PF12821 Threonine/Serine exporter, ThrE C1O59_10575 PF06738 Putative threonine/serine exporter C1O59_10585 PF00742 Homoserine dehydrogenase C1O59_10585 PF03447 Homoserine dehydrogenase, NAD binding domain C1O59_10585 PF01842 ACT domain C1O59_10590 PF01842 ACT domain C1O59_10590 PF13840 ACT domain C1O59_10590 PF00696 Amino acid kinase family C1O59_10600 PF09529 Integral membrane protein (intg_mem_TP0381) C1O59_10610 PF02867 Ribonucleotide reductase, barrel domain C1O59_10610 PF08471 Class II vitamin B12-dependent ribonucleotide reductase C1O59_10620 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1O59_10620 PF08501 Shikimate dehydrogenase substrate binding domain C1O59_10620 PF01488 Shikimate / quinate 5-dehydrogenase C1O59_10625 PF00633 Helix-hairpin-helix motif C1O59_10625 PF00730 HhH-GPD superfamily base excision DNA repair protein C1O59_10625 PF14815 NUDIX domain C1O59_10630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1O59_10635 PF00391 PEP-utilising enzyme, mobile domain C1O59_10635 PF02896 PEP-utilising enzyme, TIM barrel domain C1O59_10635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1O59_10645 PF00342 Phosphoglucose isomerase C1O59_10655 PF17785 PUA-like domain C1O59_10655 PF10672 S-adenosylmethionine-dependent methyltransferase C1O59_10665 PF01642 Methylmalonyl-CoA mutase C1O59_10665 PF02310 B12 binding domain C1O59_10670 PF01642 Methylmalonyl-CoA mutase C1O59_10700 PF03807 NADP oxidoreductase coenzyme F420-dependent C1O59_10700 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1O59_10705 PF03352 Methyladenine glycosylase C1O59_10725 PF01212 Beta-eliminating lyase C1O59_10740 PF03483 B3/4 domain C1O59_10740 PF03484 tRNA synthetase B5 domain C1O59_10740 PF03147 Ferredoxin-fold anticodon binding domain C1O59_10740 PF01588 Putative tRNA binding domain C1O59_10740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1O59_10745 PF01409 tRNA synthetases class II core domain (F) C1O59_10745 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1O59_10765 PF00183 Hsp90 protein C1O59_10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O59_10790 PF00842 Alanine racemase, C-terminal domain C1O59_10790 PF01168 Alanine racemase, N-terminal domain C1O59_10795 PF02082 Transcriptional regulator C1O59_10800 PF01053 Cys/Met metabolism PLP-dependent enzyme C1O59_10805 PF00291 Pyridoxal-phosphate dependent enzyme C1O59_10810 PF02581 Thiamine monophosphate synthase C1O59_10815 PF02110 Hydroxyethylthiazole kinase family C1O59_10830 PF07691 PA14 domain C1O59_10830 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_10830 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_10835 PF03173 Putative carbohydrate binding domain C1O59_10835 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_10835 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_10835 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1O59_10845 PF00293 NUDIX domain C1O59_10860 PF02075 Crossover junction endodeoxyribonuclease RuvC C1O59_10865 PF00271 Helicase conserved C-terminal domain C1O59_10865 PF00270 DEAD/DEAH box helicase C1O59_10870 PF00753 Metallo-beta-lactamase superfamily C1O59_10875 PF04909 Amidohydrolase C1O59_10890 PF13533 Biotin-lipoyl like C1O59_10895 PF00873 AcrB/AcrD/AcrF family C1O59_10900 PF00186 Dihydrofolate reductase C1O59_10905 PF00303 Thymidylate synthase C1O59_10910 PF13091 PLD-like domain C1O59_10910 PF13396 Phospholipase_D-nuclease N-terminal C1O59_10915 PF00364 Biotin-requiring enzyme C1O59_10915 PF00682 HMGL-like C1O59_10915 PF02436 Conserved carboxylase domain C1O59_10925 PF01554 MatE C1O59_10930 PF10609 NUBPL iron-transfer P-loop NTPase C1O59_10945 PF08502 LeuA allosteric (dimerisation) domain C1O59_10945 PF00682 HMGL-like C1O59_10950 PF01432 Peptidase family M3 C1O59_10955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O59_10960 PF00873 AcrB/AcrD/AcrF family C1O59_10965 PF02321 Outer membrane efflux protein C1O59_10995 PF00654 Voltage gated chloride channel C1O59_11015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1O59_11015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1O59_11025 PF02684 Lipid-A-disaccharide synthetase C1O59_11030 PF09335 SNARE associated Golgi protein C1O59_11095 PF09827 CRISPR associated protein Cas2 C1O59_11100 PF01867 CRISPR associated protein Cas1 C1O59_11115 PF09704 CRISPR-associated protein (Cas_Cas5) C1O59_11135 PF00171 Aldehyde dehydrogenase family C1O59_11155 PF00199 Catalase C1O59_11155 PF06628 Catalase-related immune-responsive C1O59_11155 PF18011 C-terminal domain found in long catalases C1O59_11165 PF01578 Cytochrome C assembly protein C1O59_11170 PF02915 Rubrerythrin C1O59_11175 PF13302 Acetyltransferase (GNAT) domain C1O59_11185 PF17854 FtsK alpha domain C1O59_11185 PF01580 FtsK/SpoIIIE family C1O59_11185 PF09397 Ftsk gamma domain C1O59_11185 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1O59_11200 PF02563 Polysaccharide biosynthesis/export protein C1O59_11200 PF10531 SLBB domain C1O59_11205 PF13614 AAA domain C1O59_11215 PF02397 Bacterial sugar transferase C1O59_11220 PF00535 Glycosyl transferase family 2 C1O59_11225 PF01943 Polysaccharide biosynthesis protein C1O59_11230 PF00535 Glycosyl transferase family 2 C1O59_11235 PF08759 Glycosyltransferase GT-D fold C1O59_11235 PF01501 Glycosyl transferase family 8 C1O59_11240 PF00535 Glycosyl transferase family 2 C1O59_11255 PF13439 Glycosyltransferase Family 4 C1O59_11260 PF00534 Glycosyl transferases group 1 C1O59_11260 PF13439 Glycosyltransferase Family 4 C1O59_11285 PF00535 Glycosyl transferase family 2 C1O59_11290 PF00132 Bacterial transferase hexapeptide (six repeats) C1O59_11310 PF01757 Acyltransferase family C1O59_11320 PF01636 Phosphotransferase enzyme family C1O59_11325 PF05025 RbsD / FucU transport protein family C1O59_11330 PF00155 Aminotransferase class I and II C1O59_11335 PF09334 tRNA synthetases class I (M) C1O59_11335 PF08264 Anticodon-binding domain of tRNA C1O59_11340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O59_11350 PF00390 Malic enzyme, N-terminal domain C1O59_11350 PF01515 Phosphate acetyl/butaryl transferase C1O59_11350 PF03949 Malic enzyme, NAD binding domain C1O59_11360 PF00722 Glycosyl hydrolases family 16 C1O59_11365 PF00933 Glycosyl hydrolase family 3 N terminal domain C1O59_11385 PF04055 Radical SAM superfamily C1O59_11385 PF06969 HemN C-terminal domain C1O59_11420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O59_11420 PF02403 Seryl-tRNA synthetase N-terminal domain C1O59_11425 PF00107 Zinc-binding dehydrogenase C1O59_11425 PF08240 Alcohol dehydrogenase GroES-like domain C1O59_11435 PF00795 Carbon-nitrogen hydrolase C1O59_11440 PF17863 AAA lid domain C1O59_11440 PF07726 ATPase family associated with various cellular activities (AAA) C1O59_11450 PF01195 Peptidyl-tRNA hydrolase C1O59_11455 PF00905 Penicillin binding protein transpeptidase domain C1O59_11455 PF00912 Transglycosylase C1O59_11470 PF00709 Adenylosuccinate synthetase C1O59_11490 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C1O59_11490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1O59_11495 PF00374 Nickel-dependent hydrogenase C1O59_11505 PF01750 Hydrogenase maturation protease C1O59_11510 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1O59_11540 PF00881 Nitroreductase family C1O59_11545 PF00155 Aminotransferase class I and II C1O59_11565 PF07549 SecD/SecF GG Motif C1O59_11565 PF02355 Protein export membrane protein C1O59_11575 PF05683 Fumarase C-terminus C1O59_11575 PF05681 Fumarate hydratase (Fumerase) C1O59_11595 PF01555 DNA methylase C1O59_11615 PF07691 PA14 domain C1O59_11615 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O59_11615 PF02838 Glycosyl hydrolase family 20, domain 2 C1O59_11620 PF00448 SRP54-type protein, GTPase domain C1O59_11620 PF02881 SRP54-type protein, helical bundle domain C1O59_11620 PF02978 Signal peptide binding domain C1O59_11665 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1O59_11670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C1O59_11685 PF00501 AMP-binding enzyme C1O59_11685 PF13193 AMP-binding enzyme C-terminal domain C1O59_11715 PF01432 Peptidase family M3 C1O59_11725 PF00750 tRNA synthetases class I (R) C1O59_11725 PF03485 Arginyl tRNA synthetase N terminal domain C1O59_11725 PF05746 DALR anticodon binding domain C1O59_11760 PF17760 UvrA interaction domain C1O59_11760 PF00005 ABC transporter C1O59_11760 PF17755 UvrA DNA-binding domain C1O59_11765 PF07516 SecA Wing and Scaffold domain C1O59_11765 PF07517 SecA DEAD-like domain C1O59_11765 PF01043 SecA preprotein cross-linking domain C1O59_11765 PF02810 SEC-C motif C1O59_11770 PF00696 Amino acid kinase family C1O59_11770 PF00583 Acetyltransferase (GNAT) family C1O59_11785 PF00293 NUDIX domain