locus-tag class description C1I90_00005 PF00308 Bacterial dnaA protein C1I90_00005 PF11638 DnaA N-terminal domain C1I90_00005 PF08299 Bacterial dnaA protein helix-turn-helix C1I90_00010 PF00005 ABC transporter C1I90_00030 PF01784 NIF3 (NGG1p interacting factor 3) C1I90_00035 PF00849 RNA pseudouridylate synthase C1I90_00040 PF01817 Chorismate mutase type II C1I90_00040 PF00800 Prephenate dehydratase C1I90_00040 PF01842 ACT domain C1I90_00050 PF01653 NAD-dependent DNA ligase adenylation domain C1I90_00050 PF00533 BRCA1 C Terminus (BRCT) domain C1I90_00050 PF03120 NAD-dependent DNA ligase OB-fold domain C1I90_00050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1I90_00055 PF01066 CDP-alcohol phosphatidyltransferase C1I90_00065 PF00271 Helicase conserved C-terminal domain C1I90_00065 PF00270 DEAD/DEAH box helicase C1I90_00085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1I90_00100 PF07690 Major Facilitator Superfamily C1I90_00105 PF04552 Sigma-54, DNA binding domain C1I90_00105 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1I90_00105 PF04963 Sigma-54 factor, core binding domain C1I90_00115 PF02567 Phenazine biosynthesis-like protein C1I90_00120 PF02659 Putative manganese efflux pump C1I90_00140 PF00004 ATPase family associated with various cellular activities (AAA) C1I90_00140 PF12002 MgsA AAA+ ATPase C terminal C1I90_00140 PF16193 AAA C-terminal domain C1I90_00150 PF01370 NAD dependent epimerase/dehydratase family C1I90_00155 PF01636 Phosphotransferase enzyme family C1I90_00175 PF09180 Prolyl-tRNA synthetase, C-terminal C1I90_00175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I90_00175 PF03129 Anticodon binding domain C1I90_00190 PF01527 Transposase C1I90_00225 PF13520 Amino acid permease C1I90_00230 PF04960 Glutaminase C1I90_00245 PF01235 Sodium:alanine symporter family C1I90_00255 PF03462 PCRF domain C1I90_00255 PF00472 RF-1 domain C1I90_00260 PF05175 Methyltransferase small domain C1I90_00260 PF17827 PrmC N-terminal domain C1I90_00265 PF17764 3′ DNA-binding domain (3′BD) C1I90_00265 PF18074 Primosomal protein N C-terminal domain C1I90_00265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1I90_00265 PF04851 Type III restriction enzyme, res subunit C1I90_00265 PF00271 Helicase conserved C-terminal domain C1I90_00270 PF01678 Diaminopimelate epimerase C1I90_00290 PF01209 ubiE/COQ5 methyltransferase family C1I90_00295 PF01554 MatE C1I90_00340 PF00682 HMGL-like C1I90_00340 PF08502 LeuA allosteric (dimerisation) domain C1I90_00345 PF02272 DHHA1 domain C1I90_00345 PF01368 DHH family C1I90_00345 PF17768 RecJ OB domain C1I90_00350 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_00350 PF07555 beta-N-acetylglucosaminidase C1I90_00365 PF00005 ABC transporter C1I90_00370 PF00950 ABC 3 transport family C1I90_00375 PF02151 UvrB/uvrC motif C1I90_00380 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C1I90_00385 PF02861 Clp amino terminal domain, pathogenicity island component C1I90_00385 PF17871 AAA lid domain C1I90_00385 PF07724 AAA domain (Cdc48 subfamily) C1I90_00385 PF00004 ATPase family associated with various cellular activities (AAA) C1I90_00385 PF10431 C-terminal, D2-small domain, of ClpB protein C1I90_00400 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1I90_00405 PF00682 HMGL-like C1I90_00405 PF08502 LeuA allosteric (dimerisation) domain C1I90_00415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1I90_00415 PF02542 YgbB family C1I90_00425 PF00579 tRNA synthetases class I (W and Y) C1I90_00435 PF13277 YmdB-like protein C1I90_00445 PF00899 ThiF family C1I90_00500 PF03793 PASTA domain C1I90_00500 PF00069 Protein kinase domain C1I90_00515 PF01555 DNA methylase C1I90_00515 PF18273 Type III R-M EcoP15I C-terminal domain C1I90_00520 PF04851 Type III restriction enzyme, res subunit C1I90_00520 PF08774 VRR-NUC domain C1I90_00590 PF00294 pfkB family carbohydrate kinase C1I90_00600 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C1I90_00600 PF09297 NADH pyrophosphatase zinc ribbon domain C1I90_00600 PF00293 NUDIX domain C1I90_00610 PF00155 Aminotransferase class I and II C1I90_00615 PF00069 Protein kinase domain C1I90_00620 PF13614 AAA domain C1I90_00625 PF00069 Protein kinase domain C1I90_00665 PF01119 DNA mismatch repair protein, C-terminal domain C1I90_00665 PF08676 MutL C terminal dimerisation domain C1I90_00680 PF04343 Protein of unknown function, DUF488 C1I90_00690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1I90_00690 PF03900 Porphobilinogen deaminase, C-terminal domain C1I90_00695 PF01488 Shikimate / quinate 5-dehydrogenase C1I90_00695 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1I90_00705 PF02649 Type I GTP cyclohydrolase folE2 C1I90_00710 PF01084 Ribosomal protein S18 C1I90_00715 PF00471 Ribosomal protein L33 C1I90_00720 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1I90_00725 PF00480 ROK family C1I90_00730 PF01189 16S rRNA methyltransferase RsmB/F C1I90_00730 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C1I90_00730 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C1I90_00740 PF00293 NUDIX domain C1I90_00745 PF00529 HlyD membrane-fusion protein of T1SS C1I90_00745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I90_00750 PF00005 ABC transporter C1I90_00750 PF12704 MacB-like periplasmic core domain C1I90_00750 PF02687 FtsX-like permease family C1I90_00755 PF12704 MacB-like periplasmic core domain C1I90_00755 PF02687 FtsX-like permease family C1I90_00755 PF00005 ABC transporter C1I90_00760 PF02321 Outer membrane efflux protein C1I90_00770 PF00873 AcrB/AcrD/AcrF family C1I90_00775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I90_00775 PF00529 HlyD membrane-fusion protein of T1SS C1I90_00820 PF01980 tRNA-methyltransferase O C1I90_00820 PF18389 TrmO C-terminal domain C1I90_00825 PF01979 Amidohydrolase family C1I90_00830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1I90_00830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1I90_00835 PF00156 Phosphoribosyl transferase domain C1I90_00840 PF00731 AIR carboxylase C1I90_00855 PF04371 Porphyromonas-type peptidyl-arginine deiminase C1I90_00865 PF02163 Peptidase family M50 C1I90_00865 PF17820 PDZ domain C1I90_00870 PF01594 AI-2E family transporter C1I90_00875 PF16385 Domain of unknown function C1I90_00875 PF00884 Sulfatase C1I90_00885 PF07670 Nucleoside recognition C1I90_00885 PF02421 Ferrous iron transport protein B C1I90_00885 PF17910 FeoB cytosolic helical domain C1I90_00885 PF07664 Ferrous iron transport protein B C terminus C1I90_00885 PF04023 FeoA domain C1I90_00925 PF00521 DNA gyrase/topoisomerase IV, subunit A C1I90_00960 PF02195 ParB-like nuclease domain C1I90_00960 PF17762 HTH domain found in ParB protein C1I90_00990 PF13593 SBF-like CPA transporter family (DUF4137) C1I90_00995 PF01479 S4 domain C1I90_00995 PF00579 tRNA synthetases class I (W and Y) C1I90_01015 PF12911 N-terminal TM domain of oligopeptide transport permease C C1I90_01015 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_01020 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_01025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1I90_01035 PF16653 Saccharopine dehydrogenase C-terminal domain C1I90_01035 PF03435 Saccharopine dehydrogenase NADP binding domain C1I90_01065 PF12327 FtsZ family, C-terminal domain C1I90_01065 PF00091 Tubulin/FtsZ family, GTPase domain C1I90_01070 PF02491 SHS2 domain inserted in FTSA C1I90_01080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1I90_01080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1I90_01080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1I90_01080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1I90_01085 PF00664 ABC transporter transmembrane region C1I90_01085 PF00005 ABC transporter C1I90_01090 PF00005 ABC transporter C1I90_01090 PF00664 ABC transporter transmembrane region C1I90_01100 PF02405 Permease MlaE C1I90_01105 PF00005 ABC transporter C1I90_01110 PF02470 MlaD protein C1I90_01130 PF00437 Type II/IV secretion system protein C1I90_01135 PF00437 Type II/IV secretion system protein C1I90_01140 PF00639 PPIC-type PPIASE domain C1I90_01140 PF09312 SurA N-terminal domain C1I90_01160 PF02348 Cytidylyltransferase C1I90_01165 PF06418 CTP synthase N-terminus C1I90_01165 PF00117 Glutamine amidotransferase class-I C1I90_01170 PF00474 Sodium:solute symporter family C1I90_01200 PF13180 PDZ domain C1I90_01205 PF00905 Penicillin binding protein transpeptidase domain C1I90_01205 PF00912 Transglycosylase C1I90_01205 PF17092 Penicillin-binding protein OB-like domain C1I90_01210 PF02646 RmuC family C1I90_01215 PF13419 Haloacid dehalogenase-like hydrolase C1I90_01220 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1I90_01220 PF00132 Bacterial transferase hexapeptide (six repeats) C1I90_01230 PF12704 MacB-like periplasmic core domain C1I90_01230 PF02687 FtsX-like permease family C1I90_01230 PF12704 MacB-like periplasmic core domain C1I90_01230 PF02687 FtsX-like permease family C1I90_01235 PF05488 PAAR motif C1I90_01235 PF05593 RHS Repeat C1I90_01250 PF03527 RHS protein C1I90_01260 PF03527 RHS protein C1I90_01300 PF04389 Peptidase family M28 C1I90_01305 PF07859 alpha/beta hydrolase fold C1I90_01305 PF13472 GDSL-like Lipase/Acylhydrolase family C1I90_01310 PF00133 tRNA synthetases class I (I, L, M and V) C1I90_01310 PF08264 Anticodon-binding domain of tRNA C1I90_01315 PF01252 Signal peptidase (SPase) II C1I90_01330 PF00266 Aminotransferase class-V C1I90_01340 PF08308 PEGA domain C1I90_01340 PF00069 Protein kinase domain C1I90_01350 PF01245 Ribosomal protein L19 C1I90_01365 PF01039 Carboxyl transferase domain C1I90_01375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1I90_01375 PF02436 Conserved carboxylase domain C1I90_01375 PF00364 Biotin-requiring enzyme C1I90_01375 PF00289 Biotin carboxylase, N-terminal domain C1I90_01375 PF02785 Biotin carboxylase C-terminal domain C1I90_01375 PF00682 HMGL-like C1I90_01380 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C1I90_01385 PF02237 Biotin protein ligase C terminal domain C1I90_01385 PF03099 Biotin/lipoate A/B protein ligase family C1I90_01385 PF08279 HTH domain C1I90_01390 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1I90_01390 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1I90_01405 PF00483 Nucleotidyl transferase C1I90_01410 PF16363 GDP-mannose 4,6 dehydratase C1I90_01415 PF00365 Phosphofructokinase C1I90_01425 PF02637 GatB domain C1I90_01425 PF02934 GatB/GatE catalytic domain C1I90_01430 PF00205 Thiamine pyrophosphate enzyme, central domain C1I90_01430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1I90_01430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1I90_01450 PF00689 Cation transporting ATPase, C-terminus C1I90_01450 PF00690 Cation transporter/ATPase, N-terminus C1I90_01455 PF00529 HlyD membrane-fusion protein of T1SS C1I90_01455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I90_01460 PF00873 AcrB/AcrD/AcrF family C1I90_01465 PF00939 Sodium:sulfate symporter transmembrane region C1I90_01475 PF08543 Phosphomethylpyrimidine kinase C1I90_01540 PF01327 Polypeptide deformylase C1I90_01545 PF00107 Zinc-binding dehydrogenase C1I90_01545 PF08240 Alcohol dehydrogenase GroES-like domain C1I90_01550 PF00343 Carbohydrate phosphorylase C1I90_01550 PF11897 Protein of unknown function (DUF3417) C1I90_01555 PF00027 Cyclic nucleotide-binding domain C1I90_01555 PF00520 Ion transport protein C1I90_01560 PF03960 ArsC family C1I90_01565 PF00753 Metallo-beta-lactamase superfamily C1I90_01565 PF10996 Beta-Casp domain C1I90_01565 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1I90_01585 PF00849 RNA pseudouridylate synthase C1I90_01585 PF01479 S4 domain C1I90_01595 PF01746 tRNA (Guanine-1)-methyltransferase C1I90_01600 PF00472 RF-1 domain C1I90_01600 PF03462 PCRF domain C1I90_01610 PF00575 S1 RNA binding domain C1I90_01660 PF02548 Ketopantoate hydroxymethyltransferase C1I90_01665 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1I90_01670 PF01113 Dihydrodipicolinate reductase, N-terminus C1I90_01670 PF05173 Dihydrodipicolinate reductase, C-terminus C1I90_01675 PF00701 Dihydrodipicolinate synthetase family C1I90_01715 PF00578 AhpC/TSA family C1I90_01800 PF04170 NlpE N-terminal domain C1I90_01800 PF17185 NlpE C-terminal OB domain C1I90_01875 PF00772 DnaB-like helicase N terminal domain C1I90_01875 PF03796 DnaB-like helicase C terminal domain C1I90_01970 PF02899 Phage integrase, N-terminal SAM-like domain C1I90_01970 PF00589 Phage integrase family C1I90_01980 PF07883 Cupin domain C1I90_01980 PF02130 Uncharacterized protein family UPF0054 C1I90_01985 PF01966 HD domain C1I90_01985 PF07697 7TM-HD extracellular C1I90_01985 PF07698 7TM receptor with intracellular HD hydrolase C1I90_01990 PF02504 Fatty acid synthesis protein C1I90_01995 PF01783 Ribosomal L32p protein family C1I90_02005 PF01230 HIT domain C1I90_02010 PF01300 Telomere recombination C1I90_02010 PF03481 Putative GTP-binding controlling metal-binding C1I90_02015 PF01202 Shikimate kinase C1I90_02020 PF00886 Ribosomal protein S16 C1I90_02035 PF02899 Phage integrase, N-terminal SAM-like domain C1I90_02035 PF00589 Phage integrase family C1I90_02050 PF02699 Preprotein translocase subunit C1I90_02055 PF01702 Queuine tRNA-ribosyltransferase C1I90_02060 PF02390 Putative methyltransferase C1I90_02070 PF03330 Lytic transglycolase C1I90_02070 PF05036 Sporulation related domain C1I90_02075 PF11858 Domain of unknown function (DUF3378) C1I90_02075 PF01351 Ribonuclease HII C1I90_02080 PF00216 Bacterial DNA-binding protein C1I90_02115 PF01618 MotA/TolQ/ExbB proton channel family C1I90_02135 PF16355 Domain of unknown function (DUF4982) C1I90_02135 PF00703 Glycosyl hydrolases family 2 C1I90_02135 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1I90_02135 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I90_02135 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I90_02140 PF10458 Valyl tRNA synthetase tRNA binding arm C1I90_02140 PF08264 Anticodon-binding domain of tRNA C1I90_02140 PF00133 tRNA synthetases class I (I, L, M and V) C1I90_02150 PF00238 Ribosomal protein L14p/L23e C1I90_02155 PF00366 Ribosomal protein S17 C1I90_02160 PF00831 Ribosomal L29 protein C1I90_02165 PF00252 Ribosomal protein L16p/L10e C1I90_02170 PF07650 KH domain C1I90_02170 PF00189 Ribosomal protein S3, C-terminal domain C1I90_02175 PF00237 Ribosomal protein L22p/L17e C1I90_02185 PF00203 Ribosomal protein S19 C1I90_02190 PF03947 Ribosomal Proteins L2, C-terminal domain C1I90_02190 PF00181 Ribosomal Proteins L2, RNA binding domain C1I90_02195 PF00276 Ribosomal protein L23 C1I90_02200 PF00573 Ribosomal protein L4/L1 family C1I90_02205 PF00297 Ribosomal protein L3 C1I90_02210 PF00338 Ribosomal protein S10p/S20e C1I90_02215 PF00679 Elongation factor G C-terminus C1I90_02215 PF14492 Elongation Factor G, domain II C1I90_02215 PF03764 Elongation factor G, domain IV C1I90_02215 PF00009 Elongation factor Tu GTP binding domain C1I90_02215 PF03144 Elongation factor Tu domain 2 C1I90_02220 PF00177 Ribosomal protein S7p/S5e C1I90_02225 PF00164 Ribosomal protein S12/S23 C1I90_02235 PF01676 Metalloenzyme superfamily C1I90_02235 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1I90_02245 PF00512 His Kinase A (phospho-acceptor) domain C1I90_02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_02245 PF00989 PAS fold C1I90_02250 PF02954 Bacterial regulatory protein, Fis family C1I90_02250 PF00072 Response regulator receiver domain C1I90_02250 PF00158 Sigma-54 interaction domain C1I90_02260 PF02609 Exonuclease VII small subunit C1I90_02265 PF02780 Transketolase, C-terminal domain C1I90_02265 PF02779 Transketolase, pyrimidine binding domain C1I90_02265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1I90_02280 PF03739 Lipopolysaccharide export system permease LptF/LptG C1I90_02285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1I90_02285 PF01926 50S ribosome-binding GTPase C1I90_02290 PF00005 ABC transporter C1I90_02290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1I90_02305 PF00005 ABC transporter C1I90_02305 PF02687 FtsX-like permease family C1I90_02305 PF12704 MacB-like periplasmic core domain C1I90_02315 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1I90_02315 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1I90_02350 PF02683 Cytochrome C biogenesis protein transmembrane region C1I90_02350 PF11412 Disulphide bond corrector protein DsbC C1I90_02365 PF05188 MutS domain II C1I90_02365 PF01624 MutS domain I C1I90_02365 PF05190 MutS family domain IV C1I90_02365 PF05192 MutS domain III C1I90_02365 PF00488 MutS domain V C1I90_02380 PF01434 Peptidase family M41 C1I90_02380 PF00004 ATPase family associated with various cellular activities (AAA) C1I90_02380 PF17862 AAA+ lid domain C1I90_02395 PF00378 Enoyl-CoA hydratase/isomerase C1I90_02435 PF00005 ABC transporter C1I90_02450 PF00005 ABC transporter C1I90_02450 PF12857 TOBE-like domain C1I90_02460 PF00106 short chain dehydrogenase C1I90_02475 PF00158 Sigma-54 interaction domain C1I90_02475 PF02954 Bacterial regulatory protein, Fis family C1I90_02475 PF01590 GAF domain C1I90_02480 PF00654 Voltage gated chloride channel C1I90_02490 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_02490 PF07691 PA14 domain C1I90_02490 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_02505 PF00282 Pyridoxal-dependent decarboxylase conserved domain C1I90_02515 PF02811 PHP domain C1I90_02515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1I90_02515 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1I90_02515 PF01336 OB-fold nucleic acid binding domain C1I90_02515 PF14579 Helix-hairpin-helix motif C1I90_02520 PF01180 Dihydroorotate dehydrogenase C1I90_02525 PF02581 Thiamine monophosphate synthase C1I90_02545 PF00571 CBS domain C1I90_02545 PF03471 Transporter associated domain C1I90_02545 PF01595 Cyclin M transmembrane N-terminal domain C1I90_02550 PF01595 Cyclin M transmembrane N-terminal domain C1I90_02550 PF00571 CBS domain C1I90_02550 PF03471 Transporter associated domain C1I90_02555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1I90_02555 PF00013 KH domain C1I90_02555 PF01138 3' exoribonuclease family, domain 1 C1I90_02555 PF03725 3' exoribonuclease family, domain 2 C1I90_02555 PF00575 S1 RNA binding domain C1I90_02560 PF00312 Ribosomal protein S15 C1I90_02590 PF01416 tRNA pseudouridine synthase C1I90_02595 PF01467 Cytidylyltransferase-like C1I90_02615 PF14245 Type IV pilin PilA C1I90_02615 PF07963 Prokaryotic N-terminal methylation motif C1I90_02620 PF03725 3' exoribonuclease family, domain 2 C1I90_02620 PF01138 3' exoribonuclease family, domain 1 C1I90_02630 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_02630 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_02630 PF07691 PA14 domain C1I90_02640 PF02457 DisA bacterial checkpoint controller nucleotide-binding C1I90_02650 PF00005 ABC transporter C1I90_02655 PF02569 Pantoate-beta-alanine ligase C1I90_02665 PF00132 Bacterial transferase hexapeptide (six repeats) C1I90_02665 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1I90_02670 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_02675 PF00005 ABC transporter C1I90_02690 PF07555 beta-N-acetylglucosaminidase C1I90_02690 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_02700 PF13580 SIS domain C1I90_02705 PF00294 pfkB family carbohydrate kinase C1I90_02705 PF01467 Cytidylyltransferase-like C1I90_02715 PF01165 Ribosomal protein S21 C1I90_02720 PF00202 Aminotransferase class-III C1I90_02730 PF00083 Sugar (and other) transporter C1I90_02740 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C1I90_02740 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1I90_02745 PF00925 GTP cyclohydrolase II C1I90_02745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1I90_02750 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1I90_02755 PF01029 NusB family C1I90_02760 PF02881 SRP54-type protein, helical bundle domain C1I90_02760 PF00448 SRP54-type protein, GTPase domain C1I90_02765 PF04055 Radical SAM superfamily C1I90_02770 PF00772 DnaB-like helicase N terminal domain C1I90_02770 PF03796 DnaB-like helicase C terminal domain C1I90_02780 PF04191 Phospholipid methyltransferase C1I90_02785 PF00994 Probable molybdopterin binding domain C1I90_02785 PF02464 Competence-damaged protein C1I90_02785 PF18146 Damage-inducible protein CinA KH domain C1I90_02790 PF02887 Pyruvate kinase, alpha/beta domain C1I90_02790 PF00224 Pyruvate kinase, barrel domain C1I90_02790 PF00391 PEP-utilising enzyme, mobile domain C1I90_02795 PF00583 Acetyltransferase (GNAT) family C1I90_02820 PF01479 S4 domain C1I90_02820 PF00163 Ribosomal protein S4/S9 N-terminal domain C1I90_02825 PF00411 Ribosomal protein S11 C1I90_02830 PF00416 Ribosomal protein S13/S18 C1I90_02835 PF08331 Domain of unknown function (DUF1730) C1I90_02850 PF17782 DprA winged helix domain C1I90_02850 PF02481 DNA recombination-mediator protein A C1I90_02855 PF00768 D-alanyl-D-alanine carboxypeptidase C1I90_02855 PF07943 Penicillin-binding protein 5, C-terminal domain C1I90_02860 PF06071 Protein of unknown function (DUF933) C1I90_02860 PF01926 50S ribosome-binding GTPase C1I90_02870 PF01597 Glycine cleavage H-protein C1I90_02875 PF02347 Glycine cleavage system P-protein C1I90_02890 PF16385 Domain of unknown function C1I90_02890 PF00884 Sulfatase C1I90_02900 PF00271 Helicase conserved C-terminal domain C1I90_02900 PF00270 DEAD/DEAH box helicase C1I90_02900 PF03880 DbpA RNA binding domain C1I90_02920 PF07681 DoxX C1I90_02925 PF00586 AIR synthase related protein, N-terminal domain C1I90_02925 PF02769 AIR synthase related protein, C-terminal domain C1I90_02930 PF00156 Phosphoribosyl transferase domain C1I90_02935 PF08281 Sigma-70, region 4 C1I90_02935 PF04542 Sigma-70 region 2 C1I90_02955 PF02441 Flavoprotein C1I90_02975 PF03976 Polyphosphate kinase 2 (PPK2) C1I90_02980 PF08220 DeoR-like helix-turn-helix domain C1I90_02980 PF00455 DeoR C terminal sensor domain C1I90_02995 PF00266 Aminotransferase class-V C1I90_03000 PF02441 Flavoprotein C1I90_03000 PF04127 DNA / pantothenate metabolism flavoprotein C1I90_03005 PF03193 RsgA GTPase C1I90_03035 PF03976 Polyphosphate kinase 2 (PPK2) C1I90_03045 PF08305 NPCBM/NEW2 domain C1I90_03055 PF12146 Serine aminopeptidase, S33 C1I90_03060 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1I90_03070 PF01016 Ribosomal L27 protein C1I90_03075 PF01475 Ferric uptake regulator family C1I90_03080 PF00005 ABC transporter C1I90_03085 PF01458 Uncharacterized protein family (UPF0051) C1I90_03090 PF01458 Uncharacterized protein family (UPF0051) C1I90_03100 PF00884 Sulfatase C1I90_03105 PF06968 Biotin and Thiamin Synthesis associated domain C1I90_03105 PF04055 Radical SAM superfamily C1I90_03110 PF00202 Aminotransferase class-III C1I90_03140 PF00535 Glycosyl transferase family 2 C1I90_03150 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1I90_03170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1I90_03170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1I90_03175 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1I90_03175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I90_03180 PF00231 ATP synthase C1I90_03185 PF00306 ATP synthase alpha/beta chain, C terminal domain C1I90_03185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I90_03185 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1I90_03190 PF00213 ATP synthase delta (OSCP) subunit C1I90_03195 PF00430 ATP synthase B/B' CF(0) C1I90_03200 PF00137 ATP synthase subunit C C1I90_03205 PF00119 ATP synthase A chain C1I90_03215 PF00905 Penicillin binding protein transpeptidase domain C1I90_03215 PF03717 Penicillin-binding Protein dimerisation domain C1I90_03255 PF00899 ThiF family C1I90_03260 PF00571 CBS domain C1I90_03260 PF01380 SIS domain C1I90_03280 PF00132 Bacterial transferase hexapeptide (six repeats) C1I90_03280 PF06426 Serine acetyltransferase, N-terminal C1I90_03290 PF00171 Aldehyde dehydrogenase family C1I90_03295 PF00696 Amino acid kinase family C1I90_03295 PF01472 PUA domain C1I90_03300 PF02780 Transketolase, C-terminal domain C1I90_03300 PF00456 Transketolase, thiamine diphosphate binding domain C1I90_03300 PF02779 Transketolase, pyrimidine binding domain C1I90_03305 PF01272 Transcription elongation factor, GreA/GreB, C-term C1I90_03305 PF03449 Transcription elongation factor, N-terminal C1I90_03315 PF01259 SAICAR synthetase C1I90_03325 PF00586 AIR synthase related protein, N-terminal domain C1I90_03325 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1I90_03325 PF02769 AIR synthase related protein, C-terminal domain C1I90_03340 PF05343 M42 glutamyl aminopeptidase C1I90_03350 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I90_03350 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I90_03350 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1I90_03350 PF00703 Glycosyl hydrolases family 2 C1I90_03360 PF10150 Ribonuclease E/G family C1I90_03360 PF00575 S1 RNA binding domain C1I90_03385 PF02472 Biopolymer transport protein ExbD/TolR C1I90_03400 PF00730 HhH-GPD superfamily base excision DNA repair protein C1I90_03420 PF00218 Indole-3-glycerol phosphate synthase C1I90_03425 PF02021 Uncharacterised protein family UPF0102 C1I90_03430 PF01351 Ribonuclease HII C1I90_03435 PF00571 CBS domain C1I90_03435 PF03471 Transporter associated domain C1I90_03435 PF01595 Cyclin M transmembrane N-terminal domain C1I90_03445 PF00253 Ribosomal protein S14p/S29e C1I90_03455 PF00764 Arginosuccinate synthase C1I90_03460 PF00884 Sulfatase C1I90_03465 PF01189 16S rRNA methyltransferase RsmB/F C1I90_03465 PF01029 NusB family C1I90_03470 PF00121 Triosephosphate isomerase C1I90_03485 PF00884 Sulfatase C1I90_03515 PF03819 MazG nucleotide pyrophosphohydrolase domain C1I90_03525 PF00570 HRDC domain C1I90_03525 PF01612 3'-5' exonuclease C1I90_03540 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1I90_03550 PF05193 Peptidase M16 inactive domain C1I90_03550 PF00675 Insulinase (Peptidase family M16) C1I90_03570 PF02677 Epoxyqueuosine reductase QueH C1I90_03575 PF03466 LysR substrate binding domain C1I90_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1I90_03580 PF02219 Methylenetetrahydrofolate reductase C1I90_03585 PF01717 Cobalamin-independent synthase, Catalytic domain C1I90_03585 PF08267 Cobalamin-independent synthase, N-terminal domain C1I90_03605 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1I90_03605 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C1I90_03610 PF03734 L,D-transpeptidase catalytic domain C1I90_03630 PF00291 Pyridoxal-phosphate dependent enzyme C1I90_03630 PF00585 C-terminal regulatory domain of Threonine dehydratase C1I90_03635 PF02545 Maf-like protein C1I90_03640 PF16360 GTP-binding GTPase Middle Region C1I90_03640 PF13167 GTP-binding GTPase N-terminal C1I90_03640 PF01926 50S ribosome-binding GTPase C1I90_03645 PF00069 Protein kinase domain C1I90_03660 PF00586 AIR synthase related protein, N-terminal domain C1I90_03660 PF02769 AIR synthase related protein, C-terminal domain C1I90_03670 PF02224 Cytidylate kinase C1I90_03680 PF02463 RecF/RecN/SMC N terminal domain C1I90_03690 PF00035 Double-stranded RNA binding motif C1I90_03690 PF14622 Ribonuclease-III-like C1I90_03705 PF03372 Endonuclease/Exonuclease/phosphatase family C1I90_03710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1I90_03725 PF01502 Phosphoribosyl-AMP cyclohydrolase C1I90_03730 PF09115 DNA polymerase III, delta subunit, C terminal C1I90_03745 PF02142 MGS-like domain C1I90_03745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1I90_03745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1I90_03760 PF08241 Methyltransferase domain C1I90_03765 PF02540 NAD synthase C1I90_03765 PF00795 Carbon-nitrogen hydrolase C1I90_03770 PF00893 Small Multidrug Resistance protein C1I90_03810 PF05491 RuvB C-terminal winged helix domain C1I90_03810 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1I90_03810 PF17864 RuvB AAA lid domain C1I90_03815 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1I90_03815 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1I90_03820 PF00667 FAD binding domain C1I90_03820 PF00175 Oxidoreductase NAD-binding domain C1I90_03820 PF00258 Flavodoxin C1I90_03825 PF00535 Glycosyl transferase family 2 C1I90_03830 PF00535 Glycosyl transferase family 2 C1I90_03855 PF00534 Glycosyl transferases group 1 C1I90_03865 PF01757 Acyltransferase family C1I90_03890 PF12631 MnmE helical domain C1I90_03890 PF10396 GTP-binding protein TrmE N-terminus C1I90_03890 PF01926 50S ribosome-binding GTPase C1I90_03900 PF03458 UPF0126 domain C1I90_03905 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1I90_03905 PF00753 Metallo-beta-lactamase superfamily C1I90_03905 PF10996 Beta-Casp domain C1I90_03910 PF02381 MraZ protein, putative antitoxin-like C1I90_03915 PF01795 MraW methylase family C1I90_03925 PF03793 PASTA domain C1I90_03925 PF03717 Penicillin-binding Protein dimerisation domain C1I90_03925 PF00905 Penicillin binding protein transpeptidase domain C1I90_03930 PF08245 Mur ligase middle domain C1I90_03930 PF02875 Mur ligase family, glutamate ligase domain C1I90_03930 PF01225 Mur ligase family, catalytic domain C1I90_03935 PF08245 Mur ligase middle domain C1I90_03935 PF02875 Mur ligase family, glutamate ligase domain C1I90_03935 PF01225 Mur ligase family, catalytic domain C1I90_03940 PF00953 Glycosyl transferase family 4 C1I90_03940 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1I90_03945 PF08245 Mur ligase middle domain C1I90_03945 PF02875 Mur ligase family, glutamate ligase domain C1I90_03955 PF01098 Cell cycle protein C1I90_03960 PF04101 Glycosyltransferase family 28 C-terminal domain C1I90_03960 PF03033 Glycosyltransferase family 28 N-terminal domain C1I90_03965 PF01225 Mur ligase family, catalytic domain C1I90_03965 PF02875 Mur ligase family, glutamate ligase domain C1I90_03965 PF08245 Mur ligase middle domain C1I90_03970 PF01820 D-ala D-ala ligase N-terminus C1I90_03970 PF07478 D-ala D-ala ligase C-terminus C1I90_03980 PF00154 recA bacterial DNA recombination protein C1I90_03985 PF01520 N-acetylmuramoyl-L-alanine amidase C1I90_03990 PF03099 Biotin/lipoate A/B protein ligase family C1I90_03995 PF00330 Aconitase family (aconitate hydratase) C1I90_04000 PF00694 Aconitase C-terminal domain C1I90_04010 PF17820 PDZ domain C1I90_04010 PF13180 PDZ domain C1I90_04025 PF01761 3-dehydroquinate synthase C1I90_04035 PF00005 ABC transporter C1I90_04035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1I90_04045 PF00889 Elongation factor TS C1I90_04060 PF00793 DAHP synthetase I family C1I90_04075 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1I90_04075 PF00005 ABC transporter C1I90_04085 PF08245 Mur ligase middle domain C1I90_04085 PF02875 Mur ligase family, glutamate ligase domain C1I90_04085 PF01225 Mur ligase family, catalytic domain C1I90_04090 PF00691 OmpA family C1I90_04095 PF00580 UvrD/REP helicase N-terminal domain C1I90_04095 PF13361 UvrD-like helicase C-terminal domain C1I90_04100 PF01638 HxlR-like helix-turn-helix C1I90_04110 PF17755 UvrA DNA-binding domain C1I90_04110 PF17760 UvrA interaction domain C1I90_04110 PF00005 ABC transporter C1I90_04155 PF01336 OB-fold nucleic acid binding domain C1I90_04155 PF00152 tRNA synthetases class II (D, K and N) C1I90_04165 PF00085 Thioredoxin C1I90_04210 PF03466 LysR substrate binding domain C1I90_04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1I90_04215 PF03601 Conserved hypothetical protein 698 C1I90_04220 PF00266 Aminotransferase class-V C1I90_04235 PF01842 ACT domain C1I90_04235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1I90_04235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1I90_04245 PF04055 Radical SAM superfamily C1I90_04250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I90_04250 PF07498 Rho termination factor, N-terminal domain C1I90_04250 PF07497 Rho termination factor, RNA-binding domain C1I90_04255 PF01709 Transcriptional regulator C1I90_04260 PF01545 Cation efflux family C1I90_04260 PF16916 Dimerisation domain of Zinc Transporter C1I90_04265 PF00999 Sodium/hydrogen exchanger family C1I90_04265 PF02254 TrkA-N domain C1I90_04275 PF02547 Queuosine biosynthesis protein C1I90_04280 PF12127 SigmaW regulon antibacterial C1I90_04290 PF05690 Thiazole biosynthesis protein ThiG C1I90_04295 PF13520 Amino acid permease C1I90_04305 PF01594 AI-2E family transporter C1I90_04310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1I90_04310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1I90_04315 PF01116 Fructose-bisphosphate aldolase class-II C1I90_04325 PF01063 Amino-transferase class IV C1I90_04330 PF00722 Glycosyl hydrolases family 16 C1I90_04335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1I90_04335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1I90_04355 PF01018 GTP1/OBG C1I90_04355 PF01926 50S ribosome-binding GTPase C1I90_04360 PF01636 Phosphotransferase enzyme family C1I90_04390 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1I90_04395 PF00571 CBS domain C1I90_04395 PF00478 IMP dehydrogenase / GMP reductase domain C1I90_04400 PF00958 GMP synthase C terminal domain C1I90_04400 PF00117 Glutamine amidotransferase class-I C1I90_04400 PF02540 NAD synthase C1I90_04405 PF12464 Maltose acetyltransferase C1I90_04405 PF14602 Hexapeptide repeat of succinyl-transferase C1I90_04410 PF13419 Haloacid dehalogenase-like hydrolase C1I90_04435 PF00793 DAHP synthetase I family C1I90_04440 PF07963 Prokaryotic N-terminal methylation motif C1I90_04440 PF00114 Pilin (bacterial filament) C1I90_04450 PF02261 Aspartate decarboxylase C1I90_04455 PF06574 FAD synthetase C1I90_04455 PF01687 Riboflavin kinase C1I90_04460 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1I90_04460 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1I90_04475 PF00149 Calcineurin-like phosphoesterase C1I90_04480 PF08759 Glycosyltransferase GT-D fold C1I90_04480 PF01501 Glycosyl transferase family 8 C1I90_04485 PF01501 Glycosyl transferase family 8 C1I90_04485 PF00535 Glycosyl transferase family 2 C1I90_04495 PF01370 NAD dependent epimerase/dehydratase family C1I90_04500 PF00535 Glycosyl transferase family 2 C1I90_04525 PF01757 Acyltransferase family C1I90_04545 PF02080 TrkA-C domain C1I90_04545 PF03600 Citrate transporter C1I90_04580 PF01301 Glycosyl hydrolases family 35 C1I90_04585 PF00300 Histidine phosphatase superfamily (branch 1) C1I90_04590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1I90_04590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1I90_04595 PF01757 Acyltransferase family C1I90_04600 PF07690 Major Facilitator Superfamily C1I90_04605 PF03061 Thioesterase superfamily C1I90_04625 PF00565 Staphylococcal nuclease homologue C1I90_04640 PF02195 ParB-like nuclease domain C1I90_04645 PF11922 Domain of unknown function (DUF3440) C1I90_04645 PF01507 Phosphoadenosine phosphosulfate reductase family C1I90_04660 PF00180 Isocitrate/isopropylmalate dehydrogenase C1I90_04675 PF13335 Magnesium chelatase, subunit ChlI C-terminal C1I90_04675 PF01078 Magnesium chelatase, subunit ChlI C1I90_04685 PF01053 Cys/Met metabolism PLP-dependent enzyme C1I90_04695 PF04055 Radical SAM superfamily C1I90_04695 PF13186 Iron-sulfur cluster-binding domain C1I90_04710 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1I90_04710 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1I90_04715 PF02660 Glycerol-3-phosphate acyltransferase C1I90_04725 PF01336 OB-fold nucleic acid binding domain C1I90_04725 PF00152 tRNA synthetases class II (D, K and N) C1I90_04745 PF01638 HxlR-like helix-turn-helix C1I90_04755 PF00977 Histidine biosynthesis protein C1I90_04765 PF02386 Cation transport protein C1I90_04775 PF11898 Domain of unknown function (DUF3418) C1I90_04775 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C1I90_04775 PF00271 Helicase conserved C-terminal domain C1I90_04775 PF00270 DEAD/DEAH box helicase C1I90_04775 PF04408 Helicase associated domain (HA2) C1I90_04780 PF10369 Small subunit of acetolactate synthase C1I90_04785 PF00595 PDZ domain C1I90_04785 PF13180 PDZ domain C1I90_04795 PF13932 GidA associated domain C1I90_04795 PF01134 Glucose inhibited division protein A C1I90_04800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1I90_04800 PF01872 RibD C-terminal domain C1I90_04805 PF00132 Bacterial transferase hexapeptide (six repeats) C1I90_04805 PF00483 Nucleotidyl transferase C1I90_04815 PF00712 DNA polymerase III beta subunit, N-terminal domain C1I90_04815 PF02768 DNA polymerase III beta subunit, C-terminal domain C1I90_04815 PF02767 DNA polymerase III beta subunit, central domain C1I90_04840 PF01476 LysM domain C1I90_04840 PF00877 NlpC/P60 family C1I90_04845 PF01026 TatD related DNase C1I90_04855 PF00703 Glycosyl hydrolases family 2 C1I90_04855 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I90_04855 PF16353 Domain of unknown function(DUF4981) C1I90_04855 PF02929 Beta galactosidase small chain C1I90_04855 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I90_04870 PF13493 Domain of unknown function (DUF4118) C1I90_04870 PF13492 GAF domain C1I90_04870 PF02702 Osmosensitive K+ channel His kinase sensor domain C1I90_04870 PF00512 His Kinase A (phospho-acceptor) domain C1I90_04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_04875 PF00072 Response regulator receiver domain C1I90_04875 PF00486 Transcriptional regulatory protein, C terminal C1I90_04885 PF03814 Potassium-transporting ATPase A subunit C1I90_04895 PF02669 K+-transporting ATPase, c chain C1I90_04915 PF00004 ATPase family associated with various cellular activities (AAA) C1I90_04915 PF07724 AAA domain (Cdc48 subfamily) C1I90_04915 PF10431 C-terminal, D2-small domain, of ClpB protein C1I90_04915 PF02861 Clp amino terminal domain, pathogenicity island component C1I90_04915 PF17871 AAA lid domain C1I90_04965 PF03477 ATP cone domain C1I90_04975 PF00916 Sulfate permease family C1I90_04975 PF01740 STAS domain C1I90_04980 PF00206 Lyase C1I90_04980 PF14698 Argininosuccinate lyase C-terminal C1I90_04995 PF00113 Enolase, C-terminal TIM barrel domain C1I90_04995 PF03952 Enolase, N-terminal domain C1I90_05000 PF01261 Xylose isomerase-like TIM barrel C1I90_05010 PF13088 BNR repeat-like domain C1I90_05010 PF00754 F5/8 type C domain C1I90_05010 PF02973 Sialidase, N-terminal domain C1I90_05015 PF01966 HD domain C1I90_05015 PF01336 OB-fold nucleic acid binding domain C1I90_05025 PF04055 Radical SAM superfamily C1I90_05025 PF01938 TRAM domain C1I90_05025 PF00919 Uncharacterized protein family UPF0004 C1I90_05030 PF05958 tRNA (Uracil-5-)-methyltransferase C1I90_05030 PF01938 TRAM domain C1I90_05045 PF02384 N-6 DNA Methylase C1I90_05045 PF12161 HsdM N-terminal domain C1I90_05050 PF01420 Type I restriction modification DNA specificity domain C1I90_05060 PF12008 Type I restriction and modification enzyme - subunit R C terminal C1I90_05060 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C1I90_05060 PF18766 SWI2/SNF2 ATPase C1I90_05070 PF00216 Bacterial DNA-binding protein C1I90_05075 PF16874 Glycosyl hydrolase family 36 C-terminal domain C1I90_05075 PF16875 Glycosyl hydrolase family 36 N-terminal domain C1I90_05100 PF02080 TrkA-C domain C1I90_05100 PF06826 Predicted Permease Membrane Region C1I90_05110 PF00989 PAS fold C1I90_05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_05110 PF00512 His Kinase A (phospho-acceptor) domain C1I90_05115 PF00939 Sodium:sulfate symporter transmembrane region C1I90_05140 PF08019 Phosphoethanolamine transferase EptA/EptB C1I90_05140 PF00884 Sulfatase C1I90_05145 PF02915 Rubrerythrin C1I90_05155 PF05343 M42 glutamyl aminopeptidase C1I90_05160 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_05160 PF07691 PA14 domain C1I90_05160 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_05170 PF00245 Alkaline phosphatase C1I90_05175 PF01741 Large-conductance mechanosensitive channel, MscL C1I90_05180 PF00202 Aminotransferase class-III C1I90_05190 PF09285 Elongation factor P, C-terminal C1I90_05190 PF08207 Elongation factor P (EF-P) KOW-like domain C1I90_05190 PF01132 Elongation factor P (EF-P) OB domain C1I90_05200 PF00403 Heavy-metal-associated domain C1I90_05205 PF02463 RecF/RecN/SMC N terminal domain C1I90_05210 PF12706 Beta-lactamase superfamily domain C1I90_05210 PF03099 Biotin/lipoate A/B protein ligase family C1I90_05215 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1I90_05245 PF02817 e3 binding domain C1I90_05245 PF00364 Biotin-requiring enzyme C1I90_05245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1I90_05250 PF02779 Transketolase, pyrimidine binding domain C1I90_05250 PF02780 Transketolase, C-terminal domain C1I90_05255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1I90_05255 PF02779 Transketolase, pyrimidine binding domain C1I90_05255 PF02780 Transketolase, C-terminal domain C1I90_05270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I90_05270 PF00529 HlyD membrane-fusion protein of T1SS C1I90_05275 PF00873 AcrB/AcrD/AcrF family C1I90_05280 PF07548 Chlamydia polymorphic membrane protein middle domain C1I90_05280 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1I90_05280 PF03797 Autotransporter beta-domain C1I90_05310 PF01751 Toprim domain C1I90_05310 PF01131 DNA topoisomerase C1I90_05330 PF01510 N-acetylmuramoyl-L-alanine amidase C1I90_05330 PF01476 LysM domain C1I90_05330 PF01471 Putative peptidoglycan binding domain C1I90_05335 PF00330 Aconitase family (aconitate hydratase) C1I90_05335 PF00694 Aconitase C-terminal domain C1I90_05350 PF01625 Peptide methionine sulfoxide reductase C1I90_05350 PF01641 SelR domain C1I90_05365 PF01139 tRNA-splicing ligase RtcB C1I90_05375 PF07690 Major Facilitator Superfamily C1I90_05385 PF01923 Cobalamin adenosyltransferase C1I90_05395 PF00575 S1 RNA binding domain C1I90_05395 PF00773 RNB domain C1I90_05395 PF17876 Cold shock domain C1I90_05395 PF08206 Ribonuclease B OB domain C1I90_05420 PF01136 Peptidase family U32 C1I90_05420 PF12392 Collagenase C1I90_05425 PF02875 Mur ligase family, glutamate ligase domain C1I90_05425 PF08245 Mur ligase middle domain C1I90_05440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1I90_05445 PF00271 Helicase conserved C-terminal domain C1I90_05445 PF12419 SNF2 Helicase protein C1I90_05445 PF00176 SNF2 family N-terminal domain C1I90_05450 PF02872 5'-nucleotidase, C-terminal domain C1I90_05450 PF00149 Calcineurin-like phosphoesterase C1I90_05455 PF05036 Sporulation related domain C1I90_05455 PF03330 Lytic transglycolase C1I90_05460 PF01513 ATP-NAD kinase C1I90_05465 PF00467 KOW motif C1I90_05465 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1I90_05470 PF00281 Ribosomal protein L5 C1I90_05470 PF00673 ribosomal L5P family C-terminus C1I90_05475 PF00410 Ribosomal protein S8 C1I90_05480 PF00347 Ribosomal protein L6 C1I90_05485 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1I90_05490 PF00333 Ribosomal protein S5, N-terminal domain C1I90_05490 PF03719 Ribosomal protein S5, C-terminal domain C1I90_05495 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1I90_05500 PF00344 SecY translocase C1I90_05505 PF05191 Adenylate kinase, active site lid C1I90_05510 PF00557 Metallopeptidase family M24 C1I90_05525 PF13089 Polyphosphate kinase N-terminal domain C1I90_05525 PF17941 Polyphosphate kinase C-terminal domain 1 C1I90_05525 PF02503 Polyphosphate kinase middle domain C1I90_05525 PF13090 Polyphosphate kinase C-terminal domain 2 C1I90_05535 PF01501 Glycosyl transferase family 8 C1I90_05545 PF00535 Glycosyl transferase family 2 C1I90_05550 PF01531 Glycosyl transferase family 11 C1I90_05555 PF00535 Glycosyl transferase family 2 C1I90_05570 PF00535 Glycosyl transferase family 2 C1I90_05575 PF01965 DJ-1/PfpI family C1I90_05580 PF02817 e3 binding domain C1I90_05580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1I90_05580 PF00364 Biotin-requiring enzyme C1I90_05585 PF01979 Amidohydrolase family C1I90_05590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1I90_05600 PF02554 Carbon starvation protein CstA C1I90_05610 PF00884 Sulfatase C1I90_05615 PF02033 Ribosome-binding factor A C1I90_05620 PF11987 Translation-initiation factor 2 C1I90_05620 PF04760 Translation initiation factor IF-2, N-terminal region C1I90_05620 PF00009 Elongation factor Tu GTP binding domain C1I90_05625 PF13184 NusA-like KH domain C1I90_05625 PF00575 S1 RNA binding domain C1I90_05625 PF08529 NusA N-terminal domain C1I90_05630 PF03372 Endonuclease/Exonuclease/phosphatase family C1I90_05635 PF01725 Ham1 family C1I90_05640 PF06962 Putative rRNA methylase C1I90_05645 PF04015 Domain of unknown function (DUF362) C1I90_05655 PF01061 ABC-2 type transporter C1I90_05655 PF00498 FHA domain C1I90_05655 PF00005 ABC transporter C1I90_05675 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C1I90_05680 PF02397 Bacterial sugar transferase C1I90_05685 PF08544 GHMP kinases C terminal C1I90_05685 PF00288 GHMP kinases N terminal domain C1I90_05685 PF10509 Galactokinase galactose-binding signature C1I90_05690 PF00474 Sodium:solute symporter family C1I90_05695 PF13361 UvrD-like helicase C-terminal domain C1I90_05695 PF00580 UvrD/REP helicase N-terminal domain C1I90_05700 PF00551 Formyl transferase C1I90_05700 PF02911 Formyl transferase, C-terminal domain C1I90_05705 PF04101 Glycosyltransferase family 28 C-terminal domain C1I90_05705 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C1I90_05710 PF03309 Type III pantothenate kinase C1I90_05715 PF00550 Phosphopantetheine attachment site C1I90_05730 PF02580 D-Tyr-tRNA(Tyr) deacylase C1I90_05745 PF13085 2Fe-2S iron-sulfur cluster binding domain C1I90_05750 PF02910 Fumarate reductase flavoprotein C-term C1I90_05750 PF00890 FAD binding domain C1I90_05815 PF00005 ABC transporter C1I90_05815 PF12848 ABC transporter C1I90_05815 PF16326 ABC transporter C-terminal domain C1I90_05825 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1I90_05825 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C1I90_05835 PF00571 CBS domain C1I90_05835 PF03471 Transporter associated domain C1I90_05835 PF01595 Cyclin M transmembrane N-terminal domain C1I90_05850 PF12146 Serine aminopeptidase, S33 C1I90_05860 PF00248 Aldo/keto reductase family C1I90_05870 PF17137 Domain of unknown function (DUF5110) C1I90_05870 PF01055 Glycosyl hydrolases family 31 C1I90_05870 PF16338 Domain of unknown function (DUF4968) C1I90_05870 PF13802 Galactose mutarotase-like C1I90_05880 PF04397 LytTr DNA-binding domain C1I90_05880 PF00072 Response regulator receiver domain C1I90_05915 PF00561 alpha/beta hydrolase fold C1I90_05920 PF01914 MarC family integral membrane protein C1I90_05950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1I90_05955 PF12848 ABC transporter C1I90_05955 PF16326 ABC transporter C-terminal domain C1I90_05955 PF00005 ABC transporter C1I90_06000 PF01555 DNA methylase C1I90_06030 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_06030 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_06035 PF16347 Domain of unknown function (DUF4976) C1I90_06035 PF00884 Sulfatase C1I90_06050 PF03144 Elongation factor Tu domain 2 C1I90_06050 PF00009 Elongation factor Tu GTP binding domain C1I90_06050 PF00679 Elongation factor G C-terminus C1I90_06050 PF06421 GTP-binding protein LepA C-terminus C1I90_06070 PF04998 RNA polymerase Rpb1, domain 5 C1I90_06070 PF04997 RNA polymerase Rpb1, domain 1 C1I90_06070 PF00623 RNA polymerase Rpb1, domain 2 C1I90_06070 PF04983 RNA polymerase Rpb1, domain 3 C1I90_06070 PF05000 RNA polymerase Rpb1, domain 4 C1I90_06075 PF04565 RNA polymerase Rpb2, domain 3 C1I90_06075 PF04560 RNA polymerase Rpb2, domain 7 C1I90_06075 PF04561 RNA polymerase Rpb2, domain 2 C1I90_06075 PF04563 RNA polymerase beta subunit C1I90_06075 PF10385 RNA polymerase beta subunit external 1 domain C1I90_06075 PF00562 RNA polymerase Rpb2, domain 6 C1I90_06080 PF00542 Ribosomal protein L7/L12 C-terminal domain C1I90_06080 PF16320 Ribosomal protein L7/L12 dimerisation domain C1I90_06085 PF00466 Ribosomal protein L10 C1I90_06090 PF00687 Ribosomal protein L1p/L10e family C1I90_06095 PF03946 Ribosomal protein L11, N-terminal domain C1I90_06095 PF00298 Ribosomal protein L11, RNA binding domain C1I90_06100 PF02357 Transcription termination factor nusG C1I90_06100 PF00467 KOW motif C1I90_06115 PF03143 Elongation factor Tu C-terminal domain C1I90_06115 PF03144 Elongation factor Tu domain 2 C1I90_06115 PF00009 Elongation factor Tu GTP binding domain C1I90_06125 PF00814 Glycoprotease family C1I90_06130 PF07724 AAA domain (Cdc48 subfamily) C1I90_06130 PF10431 C-terminal, D2-small domain, of ClpB protein C1I90_06130 PF06689 ClpX C4-type zinc finger C1I90_06135 PF00574 Clp protease C1I90_06140 PF05697 Bacterial trigger factor protein (TF) C1I90_06140 PF05698 Bacterial trigger factor protein (TF) C-terminus C1I90_06140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1I90_06150 PF07244 Surface antigen variable number repeat C1I90_06150 PF01103 Surface antigen C1I90_06160 PF02219 Methylenetetrahydrofolate reductase C1I90_06180 PF00873 AcrB/AcrD/AcrF family C1I90_06225 PF13649 Methyltransferase domain C1I90_06230 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1I90_06230 PF02772 S-adenosylmethionine synthetase, central domain C1I90_06230 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1I90_06235 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1I90_06235 PF05221 S-adenosyl-L-homocysteine hydrolase C1I90_06250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1I90_06260 PF16347 Domain of unknown function (DUF4976) C1I90_06260 PF00884 Sulfatase C1I90_06265 PF09382 RQC domain C1I90_06265 PF00270 DEAD/DEAH box helicase C1I90_06265 PF00271 Helicase conserved C-terminal domain C1I90_06265 PF16124 RecQ zinc-binding C1I90_06265 PF00570 HRDC domain C1I90_06275 PF00534 Glycosyl transferases group 1 C1I90_06285 PF00890 FAD binding domain C1I90_06285 PF02910 Fumarate reductase flavoprotein C-term C1I90_06290 PF00588 SpoU rRNA Methylase family C1I90_06290 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1I90_06340 PF02421 Ferrous iron transport protein B C1I90_06340 PF17910 FeoB cytosolic helical domain C1I90_06340 PF07670 Nucleoside recognition C1I90_06340 PF07664 Ferrous iron transport protein B C terminus C1I90_06355 PF03150 Di-haem cytochrome c peroxidase C1I90_06355 PF14376 Haem-binding domain C1I90_06355 PF00034 Cytochrome c C1I90_06360 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1I90_06360 PF04055 Radical SAM superfamily C1I90_06365 PF14437 MafB19-like deaminase C1I90_06370 PF00480 ROK family C1I90_06375 PF00403 Heavy-metal-associated domain C1I90_06380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I90_06380 PF07497 Rho termination factor, RNA-binding domain C1I90_06380 PF07498 Rho termination factor, N-terminal domain C1I90_06385 PF03958 Bacterial type II/III secretion system short domain C1I90_06385 PF00263 Bacterial type II and III secretion system protein C1I90_06410 PF05343 M42 glutamyl aminopeptidase C1I90_06415 PF01790 Prolipoprotein diacylglyceryl transferase C1I90_06425 PF00557 Metallopeptidase family M24 C1I90_06425 PF05195 Aminopeptidase P, N-terminal domain C1I90_06430 PF01634 ATP phosphoribosyltransferase C1I90_06430 PF08029 HisG, C-terminal domain C1I90_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_06450 PF11808 Phosphate regulon sensor protein PhoR C1I90_06450 PF00989 PAS fold C1I90_06450 PF00512 His Kinase A (phospho-acceptor) domain C1I90_06455 PF00072 Response regulator receiver domain C1I90_06455 PF00486 Transcriptional regulatory protein, C terminal C1I90_06460 PF00920 Dehydratase family C1I90_06515 PF00884 Sulfatase C1I90_06550 PF01370 NAD dependent epimerase/dehydratase family C1I90_06555 PF00398 Ribosomal RNA adenine dimethylase C1I90_06575 PF01554 MatE C1I90_06580 PF02386 Cation transport protein C1I90_06595 PF13539 D-alanyl-D-alanine carboxypeptidase C1I90_06695 PF03814 Potassium-transporting ATPase A subunit C1I90_06705 PF02669 K+-transporting ATPase, c chain C1I90_06710 PF13492 GAF domain C1I90_06710 PF13493 Domain of unknown function (DUF4118) C1I90_06710 PF02702 Osmosensitive K+ channel His kinase sensor domain C1I90_06710 PF00512 His Kinase A (phospho-acceptor) domain C1I90_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_06720 PF12867 DinB superfamily C1I90_06720 PF03781 Sulfatase-modifying factor enzyme 1 C1I90_06730 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1I90_06730 PF00753 Metallo-beta-lactamase superfamily C1I90_06740 PF00069 Protein kinase domain C1I90_06740 PF03793 PASTA domain C1I90_06745 PF00248 Aldo/keto reductase family C1I90_06750 PF13411 MerR HTH family regulatory protein C1I90_06760 PF01212 Beta-eliminating lyase C1I90_06790 PF00005 ABC transporter C1I90_06800 PF07726 ATPase family associated with various cellular activities (AAA) C1I90_06800 PF17863 AAA lid domain C1I90_06825 PF01370 NAD dependent epimerase/dehydratase family C1I90_06825 PF08338 Domain of unknown function (DUF1731) C1I90_06840 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1I90_06840 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1I90_06845 PF00005 ABC transporter C1I90_06850 PF07729 FCD domain C1I90_06850 PF00392 Bacterial regulatory proteins, gntR family C1I90_06865 PF00884 Sulfatase C1I90_06875 PF00113 Enolase, C-terminal TIM barrel domain C1I90_06875 PF03952 Enolase, N-terminal domain C1I90_06885 PF00155 Aminotransferase class I and II C1I90_06890 PF02424 ApbE family C1I90_06905 PF00830 Ribosomal L28 family C1I90_06920 PF03652 Holliday junction resolvase C1I90_06925 PF01050 Mannose-6-phosphate isomerase C1I90_06925 PF00483 Nucleotidyl transferase C1I90_06930 PF01255 Putative undecaprenyl diphosphate synthase C1I90_06935 PF00204 DNA gyrase B C1I90_06935 PF00986 DNA gyrase B subunit, carboxyl terminus C1I90_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_06935 PF01751 Toprim domain C1I90_06940 PF08544 GHMP kinases C terminal C1I90_06940 PF00288 GHMP kinases N terminal domain C1I90_06950 PF06733 DEAD_2 C1I90_06950 PF13307 Helicase C-terminal domain C1I90_06955 PF00005 ABC transporter C1I90_06980 PF00696 Amino acid kinase family C1I90_06985 PF01544 CorA-like Mg2+ transporter protein C1I90_06990 PF03948 Ribosomal protein L9, C-terminal domain C1I90_06990 PF01281 Ribosomal protein L9, N-terminal domain C1I90_06995 PF02142 MGS-like domain C1I90_06995 PF01808 AICARFT/IMPCHase bienzyme C1I90_07000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1I90_07005 PF01648 4'-phosphopantetheinyl transferase superfamily C1I90_07015 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C1I90_07015 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C1I90_07020 PF01471 Putative peptidoglycan binding domain C1I90_07020 PF01510 N-acetylmuramoyl-L-alanine amidase C1I90_07020 PF01476 LysM domain C1I90_07025 PF00271 Helicase conserved C-terminal domain C1I90_07025 PF17191 RecG wedge domain C1I90_07025 PF00270 DEAD/DEAH box helicase C1I90_07035 PF00037 4Fe-4S binding domain C1I90_07035 PF13247 4Fe-4S dicluster domain C1I90_07045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1I90_07055 PF01761 3-dehydroquinate synthase C1I90_07105 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1I90_07115 PF07085 DRTGG domain C1I90_07115 PF01368 DHH family C1I90_07115 PF00571 CBS domain C1I90_07115 PF02833 DHHA2 domain C1I90_07125 PF02575 YbaB/EbfC DNA-binding family C1I90_07130 PF12169 DNA polymerase III subunits gamma and tau domain III C1I90_07150 PF04002 RadC-like JAB domain C1I90_07155 PF03853 YjeF-related protein N-terminus C1I90_07155 PF01256 Carbohydrate kinase C1I90_07160 PF01176 Translation initiation factor 1A / IF-1 C1I90_07165 PF00572 Ribosomal protein L13 C1I90_07170 PF00380 Ribosomal protein S9/S16 C1I90_07175 PF02590 Predicted SPOUT methyltransferase C1I90_07180 PF02151 UvrB/uvrC motif C1I90_07180 PF08459 UvrC Helix-hairpin-helix N-terminal C1I90_07180 PF01541 GIY-YIG catalytic domain C1I90_07185 PF01618 MotA/TolQ/ExbB proton channel family C1I90_07190 PF02472 Biopolymer transport protein ExbD/TolR C1I90_07200 PF17092 Penicillin-binding protein OB-like domain C1I90_07200 PF00905 Penicillin binding protein transpeptidase domain C1I90_07200 PF00912 Transglycosylase C1I90_07205 PF00459 Inositol monophosphatase family C1I90_07210 PF02542 YgbB family C1I90_07290 PF01238 Phosphomannose isomerase type I C1I90_07300 PF03553 Na+/H+ antiporter family C1I90_07305 PF01370 NAD dependent epimerase/dehydratase family C1I90_07310 PF16363 GDP-mannose 4,6 dehydratase C1I90_07315 PF00117 Glutamine amidotransferase class-I C1I90_07315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1I90_07320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1I90_07320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1I90_07320 PF02142 MGS-like domain C1I90_07325 PF00120 Glutamine synthetase, catalytic domain C1I90_07325 PF18318 Glutamine synthetase C-terminal domain C1I90_07325 PF12437 Glutamine synthetase type III N terminal C1I90_07330 PF04898 Glutamate synthase central domain C1I90_07330 PF01493 GXGXG motif C1I90_07330 PF01645 Conserved region in glutamate synthase C1I90_07330 PF00310 Glutamine amidotransferases class-II C1I90_07335 PF02096 60Kd inner membrane protein C1I90_07335 PF14849 YidC periplasmic domain C1I90_07340 PF01809 Putative membrane protein insertion efficiency factor C1I90_07345 PF00825 Ribonuclease P C1I90_07350 PF00468 Ribosomal protein L34 C1I90_07365 PF13472 GDSL-like Lipase/Acylhydrolase family C1I90_07365 PF07859 alpha/beta hydrolase fold C1I90_07375 PF01263 Aldose 1-epimerase C1I90_07385 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1I90_07385 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1I90_07390 PF00348 Polyprenyl synthetase C1I90_07395 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1I90_07395 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1I90_07410 PF03313 Serine dehydratase alpha chain C1I90_07410 PF03315 Serine dehydratase beta chain C1I90_07415 PF00085 Thioredoxin C1I90_07415 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1I90_07465 PF00999 Sodium/hydrogen exchanger family C1I90_07465 PF02254 TrkA-N domain C1I90_07470 PF00149 Calcineurin-like phosphoesterase C1I90_07475 PF02073 Thermophilic metalloprotease (M29) C1I90_07480 PF00551 Formyl transferase C1I90_07485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1I90_07485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1I90_07505 PF00204 DNA gyrase B C1I90_07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_07505 PF01751 Toprim domain C1I90_07505 PF00986 DNA gyrase B subunit, carboxyl terminus C1I90_07510 PF03989 DNA gyrase C-terminal domain, beta-propeller C1I90_07510 PF00521 DNA gyrase/topoisomerase IV, subunit A C1I90_07520 PF01136 Peptidase family U32 C1I90_07525 PF03781 Sulfatase-modifying factor enzyme 1 C1I90_07545 PF01895 PhoU domain C1I90_07550 PF00005 ABC transporter C1I90_07555 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_07560 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_07565 PF12849 PBP superfamily domain C1I90_07570 PF00005 ABC transporter C1I90_07575 PF01895 PhoU domain C1I90_07580 PF01263 Aldose 1-epimerase C1I90_07595 PF00675 Insulinase (Peptidase family M16) C1I90_07595 PF05193 Peptidase M16 inactive domain C1I90_07610 PF12464 Maltose acetyltransferase C1I90_07610 PF00132 Bacterial transferase hexapeptide (six repeats) C1I90_07610 PF14602 Hexapeptide repeat of succinyl-transferase C1I90_07645 PF01765 Ribosome recycling factor C1I90_07650 PF00696 Amino acid kinase family C1I90_07655 PF05552 Conserved TM helix C1I90_07655 PF00924 Mechanosensitive ion channel C1I90_07665 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1I90_07665 PF00578 AhpC/TSA family C1I90_07670 PF00209 Sodium:neurotransmitter symporter family C1I90_07695 PF02801 Beta-ketoacyl synthase, C-terminal domain C1I90_07695 PF00109 Beta-ketoacyl synthase, N-terminal domain C1I90_07700 PF01641 SelR domain C1I90_07705 PF00817 impB/mucB/samB family C1I90_07705 PF11799 impB/mucB/samB family C-terminal domain C1I90_07740 PF00005 ABC transporter C1I90_07745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I90_07750 PF02272 DHHA1 domain C1I90_07750 PF01411 tRNA synthetases class II (A) C1I90_07750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1I90_07755 PF01066 CDP-alcohol phosphatidyltransferase C1I90_07765 PF00809 Pterin binding enzyme C1I90_07775 PF04551 GcpE protein C1I90_07800 PF02801 Beta-ketoacyl synthase, C-terminal domain C1I90_07800 PF00109 Beta-ketoacyl synthase, N-terminal domain C1I90_07805 PF00155 Aminotransferase class I and II C1I90_07825 PF02938 GAD domain C1I90_07825 PF01336 OB-fold nucleic acid binding domain C1I90_07825 PF00152 tRNA synthetases class II (D, K and N) C1I90_07830 PF13393 Histidyl-tRNA synthetase C1I90_07830 PF03129 Anticodon binding domain C1I90_07835 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1I90_07840 PF01300 Telomere recombination C1I90_07840 PF00708 Acylphosphatase C1I90_07840 PF17788 HypF Kae1-like domain C1I90_07840 PF07503 HypF finger C1I90_07845 PF01455 HupF/HypC family C1I90_07850 PF01924 Hydrogenase formation hypA family C1I90_07855 PF00586 AIR synthase related protein, N-terminal domain C1I90_07855 PF02769 AIR synthase related protein, C-terminal domain C1I90_07875 PF00012 Hsp70 protein C1I90_07880 PF00166 Chaperonin 10 Kd subunit C1I90_07885 PF00118 TCP-1/cpn60 chaperonin family C1I90_07920 PF02706 Chain length determinant protein C1I90_07920 PF13807 G-rich domain on putative tyrosine kinase C1I90_07920 PF13614 AAA domain C1I90_07935 PF01330 RuvA N terminal domain C1I90_07935 PF07499 RuvA, C-terminal domain C1I90_07940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1I90_07940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1I90_07945 PF00162 Phosphoglycerate kinase C1I90_07955 PF10566 Glycoside hydrolase 97 C1I90_07955 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation C1I90_07955 PF14508 Glycosyl-hydrolase 97 N-terminal C1I90_07965 PF01555 DNA methylase C1I90_07975 PF02559 CarD-like/TRCF domain C1I90_07975 PF00270 DEAD/DEAH box helicase C1I90_07975 PF00271 Helicase conserved C-terminal domain C1I90_07975 PF03461 TRCF domain C1I90_07975 PF17757 UvrB interaction domain C1I90_07985 PF07690 Major Facilitator Superfamily C1I90_08000 PF02811 PHP domain C1I90_08005 PF01515 Phosphate acetyl/butaryl transferase C1I90_08005 PF07085 DRTGG domain C1I90_08010 PF11734 TilS substrate C-terminal domain C1I90_08010 PF01171 PP-loop family C1I90_08015 PF01197 Ribosomal protein L31 C1I90_08050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1I90_08050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1I90_08050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1I90_08055 PF00056 lactate/malate dehydrogenase, NAD binding domain C1I90_08055 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1I90_08080 PF00881 Nitroreductase family C1I90_08085 PF00849 RNA pseudouridylate synthase C1I90_08090 PF01479 S4 domain C1I90_08090 PF00849 RNA pseudouridylate synthase C1I90_08110 PF00005 ABC transporter C1I90_08115 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_08125 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1I90_08125 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1I90_08130 PF01960 ArgJ family C1I90_08150 PF17760 UvrA interaction domain C1I90_08150 PF17755 UvrA DNA-binding domain C1I90_08180 PF02594 Uncharacterised ACR, YggU family COG1872 C1I90_08185 PF01025 GrpE C1I90_08190 PF00684 DnaJ central domain C1I90_08190 PF01556 DnaJ C terminal domain C1I90_08190 PF00226 DnaJ domain C1I90_08195 PF04452 RNA methyltransferase C1I90_08205 PF13229 Right handed beta helix region C1I90_08215 PF10502 Signal peptidase, peptidase S26 C1I90_08220 PF01565 FAD binding domain C1I90_08220 PF02913 FAD linked oxidases, C-terminal domain C1I90_08245 PF14572 Phosphoribosyl synthetase-associated domain C1I90_08245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1I90_08250 PF01386 Ribosomal L25p family C1I90_08250 PF14693 Ribosomal protein TL5, C-terminal domain C1I90_08265 PF00475 Imidazoleglycerol-phosphate dehydratase C1I90_08270 PF00117 Glutamine amidotransferase class-I C1I90_08275 PF01250 Ribosomal protein S6 C1I90_08280 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C1I90_08295 PF07943 Penicillin-binding protein 5, C-terminal domain C1I90_08295 PF00768 D-alanyl-D-alanine carboxypeptidase C1I90_08300 PF00365 Phosphofructokinase C1I90_08310 PF02535 ZIP Zinc transporter C1I90_08325 PF00155 Aminotransferase class I and II C1I90_08330 PF03755 YicC-like family, N-terminal region C1I90_08330 PF08340 Domain of unknown function (DUF1732) C1I90_08335 PF00625 Guanylate kinase C1I90_08340 PF03600 Citrate transporter C1I90_08340 PF02080 TrkA-C domain C1I90_08345 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1I90_08360 PF01040 UbiA prenyltransferase family C1I90_08395 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain C1I90_08395 PF01522 Polysaccharide deacetylase C1I90_08400 PF07549 SecD/SecF GG Motif C1I90_08400 PF02355 Protein export membrane protein C1I90_08410 PF06750 Bacterial Peptidase A24 N-terminal domain C1I90_08410 PF01478 Type IV leader peptidase family C1I90_08420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1I90_08420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1I90_08420 PF01000 RNA polymerase Rpb3/RpoA insert domain C1I90_08425 PF01196 Ribosomal protein L17 C1I90_08430 PF00698 Acyl transferase domain C1I90_08445 PF13419 Haloacid dehalogenase-like hydrolase C1I90_08460 PF00691 OmpA family C1I90_08520 PF00248 Aldo/keto reductase family C1I90_08525 PF03030 Inorganic H+ pyrophosphatase C1I90_08540 PF00425 chorismate binding enzyme C1I90_08540 PF04715 Anthranilate synthase component I, N terminal region C1I90_08545 PF02885 Glycosyl transferase family, helical bundle domain C1I90_08545 PF00591 Glycosyl transferase family, a/b domain C1I90_08550 PF00218 Indole-3-glycerol phosphate synthase C1I90_08555 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1I90_08560 PF00291 Pyridoxal-phosphate dependent enzyme C1I90_08565 PF00290 Tryptophan synthase alpha chain C1I90_08575 PF12951 Passenger-associated-transport-repeat C1I90_08585 PF00561 alpha/beta hydrolase fold C1I90_08590 PF00444 Ribosomal protein L36 C1I90_08600 PF04055 Radical SAM superfamily C1I90_08605 PF01228 Glycine radical C1I90_08605 PF02901 Pyruvate formate lyase-like C1I90_08640 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1I90_08645 PF07690 Major Facilitator Superfamily C1I90_08660 PF12344 Ultra-violet resistance protein B C1I90_08660 PF02151 UvrB/uvrC motif C1I90_08660 PF04851 Type III restriction enzyme, res subunit C1I90_08660 PF00271 Helicase conserved C-terminal domain C1I90_08660 PF17757 UvrB interaction domain C1I90_08665 PF01632 Ribosomal protein L35 C1I90_08670 PF00453 Ribosomal protein L20 C1I90_08675 PF17820 PDZ domain C1I90_08675 PF02163 Peptidase family M50 C1I90_08690 PF00580 UvrD/REP helicase N-terminal domain C1I90_08690 PF13361 UvrD-like helicase C-terminal domain C1I90_08690 PF12705 PD-(D/E)XK nuclease superfamily C1I90_08700 PF00892 EamA-like transporter family C1I90_08705 PF07678 A-macroglobulin TED domain C1I90_08705 PF01835 MG2 domain C1I90_08705 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C1I90_08705 PF07703 Alpha-2-macroglobulin bait region domain C1I90_08705 PF00207 Alpha-2-macroglobulin family C1I90_08710 PF00465 Iron-containing alcohol dehydrogenase C1I90_08720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1I90_08720 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1I90_08745 PF00285 Citrate synthase, C-terminal domain C1I90_08755 PF00588 SpoU rRNA Methylase family C1I90_08770 PF01668 SmpB protein C1I90_08780 PF00849 RNA pseudouridylate synthase C1I90_08790 PF00334 Nucleoside diphosphate kinase C1I90_08795 PF00535 Glycosyl transferase family 2 C1I90_08800 PF00535 Glycosyl transferase family 2 C1I90_08810 PF00482 Type II secretion system (T2SS), protein F C1I90_08815 PF00437 Type II/IV secretion system protein C1I90_08820 PF00437 Type II/IV secretion system protein C1I90_08825 PF01207 Dihydrouridine synthase (Dus) C1I90_08835 PF00155 Aminotransferase class I and II C1I90_08840 PF03023 Lipid II flippase MurJ C1I90_08845 PF00294 pfkB family carbohydrate kinase C1I90_08845 PF01467 Cytidylyltransferase-like C1I90_08850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1I90_08850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1I90_08855 PF02638 Glycosyl hydrolase-like 10 C1I90_08860 PF00731 AIR carboxylase C1I90_08865 PF01171 PP-loop family C1I90_08865 PF09179 TilS substrate binding domain C1I90_08865 PF11734 TilS substrate C-terminal domain C1I90_08870 PF01969 Protein of unknown function DUF111 C1I90_08875 PF00348 Polyprenyl synthetase C1I90_08880 PF00854 POT family C1I90_08890 PF01883 Iron-sulfur cluster assembly protein C1I90_08905 PF00361 Proton-conducting membrane transporter C1I90_08910 PF00361 Proton-conducting membrane transporter C1I90_08915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1I90_08915 PF00361 Proton-conducting membrane transporter C1I90_08920 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1I90_08925 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C1I90_08935 PF00146 NADH dehydrogenase C1I90_08940 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C1I90_08940 PF01568 Molydopterin dinucleotide binding domain C1I90_08940 PF00384 Molybdopterin oxidoreductase C1I90_08940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1I90_08945 PF10531 SLBB domain C1I90_08945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1I90_08945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1I90_08955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C1I90_08965 PF01522 Polysaccharide deacetylase C1I90_08975 PF00677 Lumazine binding domain C1I90_08995 PF03797 Autotransporter beta-domain C1I90_08995 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1I90_08995 PF07548 Chlamydia polymorphic membrane protein middle domain C1I90_09000 PF02446 4-alpha-glucanotransferase C1I90_09010 PF18693 TRAM domain C1I90_09010 PF00919 Uncharacterized protein family UPF0004 C1I90_09010 PF04055 Radical SAM superfamily C1I90_09015 PF01957 NfeD-like C-terminal, partner-binding C1I90_09015 PF01972 Serine dehydrogenase proteinase C1I90_09020 PF08275 DNA primase catalytic core, N-terminal domain C1I90_09020 PF10410 DnaB-helicase binding domain of primase C1I90_09020 PF01807 CHC2 zinc finger C1I90_09025 PF04545 Sigma-70, region 4 C1I90_09025 PF04539 Sigma-70 region 3 C1I90_09025 PF04542 Sigma-70 region 2 C1I90_09025 PF00140 Sigma-70 factor, region 1.2 C1I90_09025 PF03979 Sigma-70 factor, region 1.1 C1I90_09030 PF01427 D-ala-D-ala dipeptidase C1I90_09045 PF00464 Serine hydroxymethyltransferase C1I90_09050 PF03572 Peptidase family S41 C1I90_09050 PF00595 PDZ domain C1I90_09050 PF17804 Tail specific protease N-terminal domain C1I90_09050 PF11818 C-terminal domain of tail specific protease (DUF3340) C1I90_09065 PF08482 ATP-dependent helicase C-terminal C1I90_09065 PF04408 Helicase associated domain (HA2) C1I90_09065 PF00271 Helicase conserved C-terminal domain C1I90_09065 PF00270 DEAD/DEAH box helicase C1I90_09080 PF01743 Poly A polymerase head domain C1I90_09080 PF12627 Probable RNA and SrmB- binding site of polymerase A C1I90_09080 PF13735 tRNA nucleotidyltransferase domain 2 putative C1I90_09090 PF00263 Bacterial type II and III secretion system protein C1I90_09090 PF03958 Bacterial type II/III secretion system short domain C1I90_09105 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1I90_09105 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1I90_09125 PF01207 Dihydrouridine synthase (Dus) C1I90_09130 PF02401 LytB protein C1I90_09140 PF01649 Ribosomal protein S20 C1I90_09145 PF13419 Haloacid dehalogenase-like hydrolase C1I90_09150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1I90_09150 PF00205 Thiamine pyrophosphate enzyme, central domain C1I90_09150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1I90_09240 PF01555 DNA methylase C1I90_09380 PF02666 Phosphatidylserine decarboxylase C1I90_09385 PF00834 Ribulose-phosphate 3 epimerase family C1I90_09390 PF09334 tRNA synthetases class I (M) C1I90_09390 PF00133 tRNA synthetases class I (I, L, M and V) C1I90_09390 PF13603 Leucyl-tRNA synthetase, Domain 2 C1I90_09390 PF08264 Anticodon-binding domain of tRNA C1I90_09395 PF00884 Sulfatase C1I90_09405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1I90_09410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1I90_09410 PF17810 Arginine decarboxylase helical bundle domain C1I90_09410 PF17944 Arginine decarboxylase C-terminal helical extension C1I90_09425 PF16353 Domain of unknown function(DUF4981) C1I90_09425 PF00703 Glycosyl hydrolases family 2 C1I90_09425 PF02929 Beta galactosidase small chain C1I90_09425 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I90_09425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I90_09430 PF00703 Glycosyl hydrolases family 2 C1I90_09430 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I90_09430 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I90_09435 PF00004 ATPase family associated with various cellular activities (AAA) C1I90_09435 PF12002 MgsA AAA+ ATPase C terminal C1I90_09435 PF16193 AAA C-terminal domain C1I90_09440 PF07691 PA14 domain C1I90_09440 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_09440 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_09460 PF00365 Phosphofructokinase C1I90_09475 PF04055 Radical SAM superfamily C1I90_09475 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C1I90_09475 PF13186 Iron-sulfur cluster-binding domain C1I90_09510 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C1I90_09520 PF02654 Cobalamin-5-phosphate synthase C1I90_09525 PF02277 Phosphoribosyltransferase C1I90_09530 PF03186 CobD/Cbib protein C1I90_09535 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1I90_09535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1I90_09535 PF00155 Aminotransferase class I and II C1I90_09545 PF07715 TonB-dependent Receptor Plug Domain C1I90_09545 PF00593 TonB dependent receptor C1I90_09555 PF01301 Glycosyl hydrolases family 35 C1I90_09565 PF01979 Amidohydrolase family C1I90_09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1I90_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1I90_09580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1I90_09580 PF00364 Biotin-requiring enzyme C1I90_09580 PF02817 e3 binding domain C1I90_09585 PF16078 2-oxoglutarate dehydrogenase N-terminus C1I90_09585 PF16870 2-oxoglutarate dehydrogenase C-terminal C1I90_09585 PF00676 Dehydrogenase E1 component C1I90_09585 PF02779 Transketolase, pyrimidine binding domain C1I90_09590 PF02322 Cytochrome bd terminal oxidase subunit II C1I90_09595 PF01654 Cytochrome bd terminal oxidase subunit I C1I90_09605 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1I90_09620 PF00291 Pyridoxal-phosphate dependent enzyme C1I90_09625 PF01047 MarR family C1I90_09640 PF00210 Ferritin-like domain C1I90_09660 PF02698 DUF218 domain C1I90_09690 PF09382 RQC domain C1I90_09690 PF00270 DEAD/DEAH box helicase C1I90_09690 PF00570 HRDC domain C1I90_09690 PF00271 Helicase conserved C-terminal domain C1I90_09690 PF16124 RecQ zinc-binding C1I90_09705 PF02629 CoA binding domain C1I90_09705 PF00549 CoA-ligase C1I90_09710 PF08442 ATP-grasp domain C1I90_09710 PF00549 CoA-ligase C1I90_09745 PF02601 Exonuclease VII, large subunit C1I90_09745 PF13742 OB-fold nucleic acid binding domain C1I90_09750 PF01553 Acyltransferase C1I90_09750 PF00501 AMP-binding enzyme C1I90_09775 PF01370 NAD dependent epimerase/dehydratase family C1I90_09780 PF00512 His Kinase A (phospho-acceptor) domain C1I90_09780 PF00672 HAMP domain C1I90_09780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_09785 PF00072 Response regulator receiver domain C1I90_09785 PF00486 Transcriptional regulatory protein, C terminal C1I90_09795 PF00490 Delta-aminolevulinic acid dehydratase C1I90_09810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1I90_09810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I90_09810 PF02824 TGS domain C1I90_09810 PF03129 Anticodon binding domain C1I90_09815 PF00707 Translation initiation factor IF-3, C-terminal domain C1I90_09815 PF05198 Translation initiation factor IF-3, N-terminal domain C1I90_09825 PF07786 Protein of unknown function (DUF1624) C1I90_09825 PF04235 Protein of unknown function (DUF418) C1I90_09830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1I90_09830 PF13288 DXP reductoisomerase C-terminal domain C1I90_09830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1I90_09840 PF01467 Cytidylyltransferase-like C1I90_09875 PF04991 LicD family C1I90_09880 PF01467 Cytidylyltransferase-like C1I90_09890 PF04991 LicD family C1I90_09895 PF01467 Cytidylyltransferase-like C1I90_09910 PF04991 LicD family C1I90_09915 PF00128 Alpha amylase, catalytic domain C1I90_09915 PF02806 Alpha amylase, C-terminal all-beta domain C1I90_09915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1I90_09925 PF02657 Fe-S metabolism associated domain C1I90_09930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1I90_09930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1I90_09935 PF00884 Sulfatase C1I90_09940 PF05524 PEP-utilising enzyme, N-terminal C1I90_09940 PF00391 PEP-utilising enzyme, mobile domain C1I90_09940 PF02896 PEP-utilising enzyme, TIM barrel domain C1I90_09945 PF00381 PTS HPr component phosphorylation site C1I90_09950 PF07475 HPr Serine kinase C-terminal domain C1I90_09950 PF02603 HPr Serine kinase N terminus C1I90_09955 PF01546 Peptidase family M20/M25/M40 C1I90_09955 PF07687 Peptidase dimerisation domain C1I90_09960 PF00005 ABC transporter C1I90_09975 PF01168 Alanine racemase, N-terminal domain C1I90_09990 PF00535 Glycosyl transferase family 2 C1I90_10000 PF04379 ApaG domain C1I90_10005 PF12102 Domain of unknown function (DUF3578) C1I90_10005 PF07728 AAA domain (dynein-related subfamily) C1I90_10005 PF07728 AAA domain (dynein-related subfamily) C1I90_10005 PF12102 Domain of unknown function (DUF3578) C1I90_10015 PF00271 Helicase conserved C-terminal domain C1I90_10015 PF00176 SNF2 family N-terminal domain C1I90_10015 PF04434 SWIM zinc finger C1I90_10020 PF01037 Lrp/AsnC ligand binding domain C1I90_10025 PF00155 Aminotransferase class I and II C1I90_10040 PF03129 Anticodon binding domain C1I90_10040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I90_10045 PF00248 Aldo/keto reductase family C1I90_10065 PF13519 von Willebrand factor type A domain C1I90_10080 PF07726 ATPase family associated with various cellular activities (AAA) C1I90_10080 PF17863 AAA lid domain C1I90_10085 PF01425 Amidase C1I90_10090 PF02686 Glu-tRNAGln amidotransferase C subunit C1I90_10130 PF13180 PDZ domain C1I90_10135 PF13180 PDZ domain C1I90_10170 PF00155 Aminotransferase class I and II C1I90_10180 PF00248 Aldo/keto reductase family C1I90_10185 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1I90_10190 PF00248 Aldo/keto reductase family C1I90_10195 PF00149 Calcineurin-like phosphoesterase C1I90_10215 PF02525 Flavodoxin-like fold C1I90_10220 PF13411 MerR HTH family regulatory protein C1I90_10230 PF00128 Alpha amylase, catalytic domain C1I90_10230 PF09154 Domain of unknown function (DUF1939) C1I90_10240 PF01554 MatE C1I90_10250 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_10250 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_10265 PF04321 RmlD substrate binding domain C1I90_10270 PF17785 PUA-like domain C1I90_10270 PF10672 S-adenosylmethionine-dependent methyltransferase C1I90_10290 PF17785 PUA-like domain C1I90_10290 PF10672 S-adenosylmethionine-dependent methyltransferase C1I90_10295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1I90_10295 PF02585 GlcNAc-PI de-N-acetylase C1I90_10310 PF01728 FtsJ-like methyltransferase C1I90_10310 PF01479 S4 domain C1I90_10340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1I90_10340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1I90_10350 PF07882 L-fucose isomerase, second N-terminal domain C1I90_10350 PF02952 L-fucose isomerase, C-terminal domain C1I90_10350 PF07881 L-fucose isomerase, first N-terminal domain C1I90_10355 PF07690 Major Facilitator Superfamily C1I90_10365 PF13859 BNR repeat-like domain C1I90_10365 PF14873 N-terminal domain of BNR-repeat neuraminidase C1I90_10370 PF04542 Sigma-70 region 2 C1I90_10370 PF08281 Sigma-70, region 4 C1I90_10385 PF02583 Metal-sensitive transcriptional repressor C1I90_10390 PF00403 Heavy-metal-associated domain C1I90_10395 PF01964 Radical SAM ThiC family C1I90_10395 PF13667 ThiC-associated domain C1I90_10415 PF17820 PDZ domain C1I90_10415 PF13180 PDZ domain C1I90_10420 PF13286 Phosphohydrolase-associated domain C1I90_10420 PF01966 HD domain C1I90_10425 PF00892 EamA-like transporter family C1I90_10440 PF00842 Alanine racemase, C-terminal domain C1I90_10440 PF01168 Alanine racemase, N-terminal domain C1I90_10445 PF00005 ABC transporter C1I90_10445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1I90_10450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1I90_10450 PF00005 ABC transporter C1I90_10455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1I90_10460 PF12911 N-terminal TM domain of oligopeptide transport permease C C1I90_10460 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_10465 PF00528 Binding-protein-dependent transport system inner membrane component C1I90_10480 PF02558 Ketopantoate reductase PanE/ApbA C1I90_10480 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1I90_10485 PF01268 Formate--tetrahydrofolate ligase C1I90_10490 PF06940 Domain of unknown function (DUF1287) C1I90_10495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1I90_10495 PF02843 Phosphoribosylglycinamide synthetase, C domain C1I90_10495 PF02844 Phosphoribosylglycinamide synthetase, N domain C1I90_10500 PF00436 Single-strand binding protein family C1I90_10510 PF01618 MotA/TolQ/ExbB proton channel family C1I90_10520 PF01327 Polypeptide deformylase C1I90_10530 PF00534 Glycosyl transferases group 1 C1I90_10530 PF13439 Glycosyltransferase Family 4 C1I90_10535 PF01055 Glycosyl hydrolases family 31 C1I90_10535 PF16338 Domain of unknown function (DUF4968) C1I90_10535 PF17137 Domain of unknown function (DUF5110) C1I90_10535 PF13802 Galactose mutarotase-like C1I90_10560 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1I90_10560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1I90_10565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1I90_10580 PF01757 Acyltransferase family C1I90_10585 PF00180 Isocitrate/isopropylmalate dehydrogenase C1I90_10600 PF00753 Metallo-beta-lactamase superfamily C1I90_10600 PF10996 Beta-Casp domain C1I90_10600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1I90_10605 PF02223 Thymidylate kinase C1I90_10610 PF06508 Queuosine biosynthesis protein QueC C1I90_10615 PF14489 QueF-like protein C1I90_10620 PF00924 Mechanosensitive ion channel C1I90_10625 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1I90_10630 PF00902 Sec-independent protein translocase protein (TatC) C1I90_10635 PF02673 Bacitracin resistance protein BacA C1I90_10655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1I90_10665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1I90_10670 PF00216 Bacterial DNA-binding protein C1I90_10675 PF01264 Chorismate synthase C1I90_10685 PF00175 Oxidoreductase NAD-binding domain C1I90_10685 PF00667 FAD binding domain C1I90_10685 PF00258 Flavodoxin C1I90_10695 PF00149 Calcineurin-like phosphoesterase C1I90_10715 PF02086 D12 class N6 adenine-specific DNA methyltransferase C1I90_10720 PF00589 Phage integrase family C1I90_10720 PF02899 Phage integrase, N-terminal SAM-like domain C1I90_10740 PF00465 Iron-containing alcohol dehydrogenase C1I90_10745 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1I90_10760 PF07977 FabA-like domain C1I90_10760 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1I90_10765 PF00483 Nucleotidyl transferase C1I90_10775 PF00795 Carbon-nitrogen hydrolase C1I90_10790 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_10790 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_10790 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1I90_10790 PF03173 Putative carbohydrate binding domain C1I90_10805 PF01578 Cytochrome C assembly protein C1I90_10815 PF01497 Periplasmic binding protein C1I90_10820 PF00005 ABC transporter C1I90_10825 PF01032 FecCD transport family C1I90_10830 PF01032 FecCD transport family C1I90_10865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1I90_10865 PF01367 5'-3' exonuclease, C-terminal SAM fold C1I90_10865 PF00476 DNA polymerase family A C1I90_10865 PF01612 3'-5' exonuclease C1I90_10880 PF00206 Lyase C1I90_10880 PF10397 Adenylosuccinate lyase C-terminus C1I90_10890 PF01546 Peptidase family M20/M25/M40 C1I90_10890 PF07687 Peptidase dimerisation domain C1I90_10910 PF00701 Dihydrodipicolinate synthetase family C1I90_10925 PF00425 chorismate binding enzyme C1I90_10930 PF00117 Glutamine amidotransferase class-I C1I90_10935 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1I90_10935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1I90_10950 PF00958 GMP synthase C terminal domain C1I90_10950 PF00117 Glutamine amidotransferase class-I C1I90_10950 PF02540 NAD synthase C1I90_10955 PF04073 Aminoacyl-tRNA editing domain C1I90_10995 PF00809 Pterin binding enzyme C1I90_10995 PF02607 B12 binding domain C1I90_10995 PF02310 B12 binding domain C1I90_10995 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1I90_10995 PF02574 Homocysteine S-methyltransferase C1I90_11000 PF06738 Putative threonine/serine exporter C1I90_11005 PF12821 Threonine/Serine exporter, ThrE C1I90_11005 PF06738 Putative threonine/serine exporter C1I90_11015 PF03447 Homoserine dehydrogenase, NAD binding domain C1I90_11015 PF01842 ACT domain C1I90_11015 PF00742 Homoserine dehydrogenase C1I90_11020 PF01842 ACT domain C1I90_11020 PF13840 ACT domain C1I90_11020 PF00696 Amino acid kinase family C1I90_11030 PF09529 Integral membrane protein (intg_mem_TP0381) C1I90_11045 PF02867 Ribonucleotide reductase, barrel domain C1I90_11045 PF08471 Class II vitamin B12-dependent ribonucleotide reductase C1I90_11050 PF01488 Shikimate / quinate 5-dehydrogenase C1I90_11050 PF08501 Shikimate dehydrogenase substrate binding domain C1I90_11050 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1I90_11055 PF14815 NUDIX domain C1I90_11055 PF00730 HhH-GPD superfamily base excision DNA repair protein C1I90_11055 PF00633 Helix-hairpin-helix motif C1I90_11060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1I90_11065 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1I90_11065 PF00391 PEP-utilising enzyme, mobile domain C1I90_11065 PF02896 PEP-utilising enzyme, TIM barrel domain C1I90_11075 PF00342 Phosphoglucose isomerase C1I90_11085 PF17785 PUA-like domain C1I90_11085 PF10672 S-adenosylmethionine-dependent methyltransferase C1I90_11095 PF02310 B12 binding domain C1I90_11095 PF01642 Methylmalonyl-CoA mutase C1I90_11100 PF01642 Methylmalonyl-CoA mutase C1I90_11130 PF03807 NADP oxidoreductase coenzyme F420-dependent C1I90_11130 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1I90_11135 PF03352 Methyladenine glycosylase C1I90_11155 PF01212 Beta-eliminating lyase C1I90_11170 PF03484 tRNA synthetase B5 domain C1I90_11170 PF03483 B3/4 domain C1I90_11170 PF01588 Putative tRNA binding domain C1I90_11170 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1I90_11170 PF03147 Ferredoxin-fold anticodon binding domain C1I90_11175 PF01409 tRNA synthetases class II core domain (F) C1I90_11175 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1I90_11195 PF00183 Hsp90 protein C1I90_11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I90_11220 PF00842 Alanine racemase, C-terminal domain C1I90_11220 PF01168 Alanine racemase, N-terminal domain C1I90_11225 PF02082 Transcriptional regulator C1I90_11230 PF01053 Cys/Met metabolism PLP-dependent enzyme C1I90_11235 PF00291 Pyridoxal-phosphate dependent enzyme C1I90_11240 PF02581 Thiamine monophosphate synthase C1I90_11245 PF02110 Hydroxyethylthiazole kinase family C1I90_11260 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_11260 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_11260 PF07691 PA14 domain C1I90_11265 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_11265 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_11275 PF00293 NUDIX domain C1I90_11290 PF02075 Crossover junction endodeoxyribonuclease RuvC C1I90_11295 PF00271 Helicase conserved C-terminal domain C1I90_11295 PF00270 DEAD/DEAH box helicase C1I90_11300 PF00753 Metallo-beta-lactamase superfamily C1I90_11305 PF04909 Amidohydrolase C1I90_11320 PF13533 Biotin-lipoyl like C1I90_11325 PF00873 AcrB/AcrD/AcrF family C1I90_11330 PF00186 Dihydrofolate reductase C1I90_11335 PF00303 Thymidylate synthase C1I90_11340 PF13091 PLD-like domain C1I90_11340 PF13396 Phospholipase_D-nuclease N-terminal C1I90_11345 PF00364 Biotin-requiring enzyme C1I90_11345 PF00682 HMGL-like C1I90_11345 PF02436 Conserved carboxylase domain C1I90_11355 PF01554 MatE C1I90_11360 PF10609 NUBPL iron-transfer P-loop NTPase C1I90_11360 PF01883 Iron-sulfur cluster assembly protein C1I90_11375 PF00682 HMGL-like C1I90_11375 PF08502 LeuA allosteric (dimerisation) domain C1I90_11380 PF01432 Peptidase family M3 C1I90_11385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I90_11390 PF00873 AcrB/AcrD/AcrF family C1I90_11395 PF02321 Outer membrane efflux protein C1I90_11430 PF00654 Voltage gated chloride channel C1I90_11445 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1I90_11445 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1I90_11455 PF02684 Lipid-A-disaccharide synthetase C1I90_11460 PF09335 SNARE associated Golgi protein C1I90_11525 PF09827 CRISPR associated protein Cas2 C1I90_11530 PF01867 CRISPR associated protein Cas1 C1I90_11545 PF09704 CRISPR-associated protein (Cas_Cas5) C1I90_11565 PF00171 Aldehyde dehydrogenase family C1I90_11585 PF00199 Catalase C1I90_11585 PF06628 Catalase-related immune-responsive C1I90_11585 PF18011 C-terminal domain found in long catalases C1I90_11600 PF01578 Cytochrome C assembly protein C1I90_11605 PF02915 Rubrerythrin C1I90_11610 PF13302 Acetyltransferase (GNAT) domain C1I90_11620 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1I90_11620 PF17854 FtsK alpha domain C1I90_11620 PF09397 Ftsk gamma domain C1I90_11620 PF01580 FtsK/SpoIIIE family C1I90_11635 PF02563 Polysaccharide biosynthesis/export protein C1I90_11635 PF10531 SLBB domain C1I90_11640 PF13614 AAA domain C1I90_11650 PF02397 Bacterial sugar transferase C1I90_11655 PF00535 Glycosyl transferase family 2 C1I90_11660 PF01943 Polysaccharide biosynthesis protein C1I90_11665 PF00535 Glycosyl transferase family 2 C1I90_11670 PF08759 Glycosyltransferase GT-D fold C1I90_11670 PF01501 Glycosyl transferase family 8 C1I90_11675 PF00535 Glycosyl transferase family 2 C1I90_11690 PF13439 Glycosyltransferase Family 4 C1I90_11695 PF13439 Glycosyltransferase Family 4 C1I90_11695 PF00534 Glycosyl transferases group 1 C1I90_11720 PF00535 Glycosyl transferase family 2 C1I90_11725 PF00132 Bacterial transferase hexapeptide (six repeats) C1I90_11740 PF01757 Acyltransferase family C1I90_11750 PF01636 Phosphotransferase enzyme family C1I90_11755 PF05025 RbsD / FucU transport protein family C1I90_11760 PF00155 Aminotransferase class I and II C1I90_11765 PF09334 tRNA synthetases class I (M) C1I90_11765 PF08264 Anticodon-binding domain of tRNA C1I90_11770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1I90_11775 PF00390 Malic enzyme, N-terminal domain C1I90_11775 PF03949 Malic enzyme, NAD binding domain C1I90_11775 PF01515 Phosphate acetyl/butaryl transferase C1I90_11785 PF00722 Glycosyl hydrolases family 16 C1I90_11790 PF00933 Glycosyl hydrolase family 3 N terminal domain C1I90_11810 PF04055 Radical SAM superfamily C1I90_11810 PF06969 HemN C-terminal domain C1I90_11845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I90_11845 PF02403 Seryl-tRNA synthetase N-terminal domain C1I90_11850 PF08240 Alcohol dehydrogenase GroES-like domain C1I90_11850 PF00107 Zinc-binding dehydrogenase C1I90_11860 PF00795 Carbon-nitrogen hydrolase C1I90_11865 PF17863 AAA lid domain C1I90_11865 PF07726 ATPase family associated with various cellular activities (AAA) C1I90_11875 PF01195 Peptidyl-tRNA hydrolase C1I90_11880 PF00912 Transglycosylase C1I90_11880 PF00905 Penicillin binding protein transpeptidase domain C1I90_11895 PF00709 Adenylosuccinate synthetase C1I90_11915 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C1I90_11915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1I90_11920 PF00374 Nickel-dependent hydrogenase C1I90_11930 PF01750 Hydrogenase maturation protease C1I90_11935 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1I90_11965 PF00881 Nitroreductase family C1I90_11970 PF00155 Aminotransferase class I and II C1I90_11990 PF07549 SecD/SecF GG Motif C1I90_11990 PF02355 Protein export membrane protein C1I90_12000 PF05681 Fumarate hydratase (Fumerase) C1I90_12000 PF05683 Fumarase C-terminus C1I90_12020 PF01555 DNA methylase C1I90_12040 PF07691 PA14 domain C1I90_12040 PF02838 Glycosyl hydrolase family 20, domain 2 C1I90_12040 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I90_12045 PF02978 Signal peptide binding domain C1I90_12045 PF00448 SRP54-type protein, GTPase domain C1I90_12045 PF02881 SRP54-type protein, helical bundle domain C1I90_12090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1I90_12095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C1I90_12110 PF13193 AMP-binding enzyme C-terminal domain C1I90_12110 PF00501 AMP-binding enzyme C1I90_12140 PF01432 Peptidase family M3 C1I90_12150 PF03485 Arginyl tRNA synthetase N terminal domain C1I90_12150 PF05746 DALR anticodon binding domain C1I90_12150 PF00750 tRNA synthetases class I (R) C1I90_12260 PF00145 C-5 cytosine-specific DNA methylase C1I90_12335 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C1I90_12395 PF17755 UvrA DNA-binding domain C1I90_12395 PF17760 UvrA interaction domain C1I90_12395 PF00005 ABC transporter C1I90_12400 PF07517 SecA DEAD-like domain C1I90_12400 PF07516 SecA Wing and Scaffold domain C1I90_12400 PF01043 SecA preprotein cross-linking domain C1I90_12400 PF02810 SEC-C motif C1I90_12405 PF00696 Amino acid kinase family C1I90_12405 PF00583 Acetyltransferase (GNAT) family C1I90_12415 PF00293 NUDIX domain