locus-tag class description Amuc_0001 PF00293 NUDIX domain Amuc_0002 PF00308 Bacterial dnaA protein Amuc_0002 PF08299 Bacterial dnaA protein helix-turn-helix Amuc_0002 PF11638 DnaA N-terminal domain Amuc_0003 PF00005 ABC transporter Amuc_0007 PF01784 NIF3 (NGG1p interacting factor 3) Amuc_0008 PF00849 RNA pseudouridylate synthase Amuc_0009 PF00800 Prephenate dehydratase Amuc_0009 PF01842 ACT domain Amuc_0009 PF01817 Chorismate mutase type II Amuc_0011 PF00533 BRCA1 C Terminus (BRCT) domain Amuc_0011 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Amuc_0011 PF03120 NAD-dependent DNA ligase OB-fold domain Amuc_0011 PF01653 NAD-dependent DNA ligase adenylation domain Amuc_0012 PF01066 CDP-alcohol phosphatidyltransferase Amuc_0015 PF00270 DEAD/DEAH box helicase Amuc_0015 PF00271 Helicase conserved C-terminal domain Amuc_0017 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amuc_0020 PF07690 Major Facilitator Superfamily Amuc_0021 PF00309 Sigma-54 factor, Activator interacting domain (AID) Amuc_0021 PF04963 Sigma-54 factor, core binding domain Amuc_0021 PF04552 Sigma-54, DNA binding domain Amuc_0023 PF02567 Phenazine biosynthesis-like protein Amuc_0024 PF02659 Putative manganese efflux pump Amuc_0027 PF12002 MgsA AAA+ ATPase C terminal Amuc_0027 PF16193 AAA C-terminal domain Amuc_0027 PF00004 ATPase family associated with various cellular activities (AAA) Amuc_0029 PF01370 NAD dependent epimerase/dehydratase family Amuc_0030 PF01636 Phosphotransferase enzyme family Amuc_0034 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amuc_0034 PF09180 Prolyl-tRNA synthetase, C-terminal Amuc_0034 PF03129 Anticodon binding domain Amuc_0037 PF13520 Amino acid permease Amuc_0038 PF04960 Glutaminase Amuc_0040 PF01235 Sodium:alanine symporter family Amuc_0041 PF03462 PCRF domain Amuc_0041 PF00472 RF-1 domain Amuc_0042 PF17827 PrmC N-terminal domain Amuc_0042 PF05175 Methyltransferase small domain Amuc_0043 PF18074 Primosomal protein N C-terminal domain Amuc_0043 PF17764 3′ DNA-binding domain (3′BD) Amuc_0043 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Amuc_0043 PF04851 Type III restriction enzyme, res subunit Amuc_0043 PF00271 Helicase conserved C-terminal domain Amuc_0044 PF01678 Diaminopimelate epimerase Amuc_0047 PF01209 ubiE/COQ5 methyltransferase family Amuc_0048 PF01554 MatE Amuc_0051 PF01368 DHH family Amuc_0051 PF17768 RecJ OB domain Amuc_0051 PF02272 DHHA1 domain Amuc_0052 PF07555 beta-N-acetylglucosaminidase Amuc_0052 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_0055 PF00005 ABC transporter Amuc_0056 PF00950 ABC 3 transport family Amuc_0057 PF02151 UvrB/uvrC motif Amuc_0058 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Amuc_0059 PF10431 C-terminal, D2-small domain, of ClpB protein Amuc_0059 PF02861 Clp amino terminal domain, pathogenicity island component Amuc_0059 PF07724 AAA domain (Cdc48 subfamily) Amuc_0059 PF00004 ATPase family associated with various cellular activities (AAA) Amuc_0059 PF17871 AAA lid domain Amuc_0064 PF01557 Fumarylacetoacetate (FAA) hydrolase family Amuc_0065 PF08502 LeuA allosteric (dimerisation) domain Amuc_0065 PF00682 HMGL-like Amuc_0068 PF02542 YgbB family Amuc_0068 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Amuc_0070 PF00579 tRNA synthetases class I (W and Y) Amuc_0072 PF13277 YmdB-like protein Amuc_0073 PF00899 ThiF family Amuc_0075 PF00294 pfkB family carbohydrate kinase Amuc_0076 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Amuc_0076 PF00293 NUDIX domain Amuc_0076 PF09297 NADH pyrophosphatase zinc ribbon domain Amuc_0077 PF00155 Aminotransferase class I and II Amuc_0078 PF00069 Protein kinase domain Amuc_0079 PF13614 AAA domain Amuc_0080 PF00069 Protein kinase domain Amuc_0086 PF08676 MutL C terminal dimerisation domain Amuc_0086 PF01119 DNA mismatch repair protein, C-terminal domain Amuc_0089 PF04343 Protein of unknown function, DUF488 Amuc_0090 PF03900 Porphobilinogen deaminase, C-terminal domain Amuc_0090 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Amuc_0091 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Amuc_0091 PF01488 Shikimate / quinate 5-dehydrogenase Amuc_0093 PF02649 Type I GTP cyclohydrolase folE2 Amuc_0094 PF01084 Ribosomal protein S18 Amuc_0095 PF00471 Ribosomal protein L33 Amuc_0096 PF01258 Prokaryotic dksA/traR C4-type zinc finger Amuc_0097 PF00480 ROK family Amuc_0098 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Amuc_0098 PF01189 16S rRNA methyltransferase RsmB/F Amuc_0098 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Amuc_0100 PF00293 NUDIX domain Amuc_0102 PF00529 HlyD membrane-fusion protein of T1SS Amuc_0102 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amuc_0103 PF12704 MacB-like periplasmic core domain Amuc_0103 PF00005 ABC transporter Amuc_0103 PF02687 FtsX-like permease family Amuc_0104 PF00005 ABC transporter Amuc_0104 PF02687 FtsX-like permease family Amuc_0104 PF12704 MacB-like periplasmic core domain Amuc_0105 PF02321 Outer membrane efflux protein Amuc_0107 PF00873 AcrB/AcrD/AcrF family Amuc_0108 PF00529 HlyD membrane-fusion protein of T1SS Amuc_0108 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amuc_0110 PF01980 tRNA-methyltransferase O Amuc_0110 PF18389 TrmO C-terminal domain Amuc_0111 PF01979 Amidohydrolase family Amuc_0112 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amuc_0112 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amuc_0113 PF00156 Phosphoribosyl transferase domain Amuc_0114 PF00731 AIR carboxylase Amuc_0117 PF04371 Porphyromonas-type peptidyl-arginine deiminase Amuc_0119 PF02163 Peptidase family M50 Amuc_0119 PF17820 PDZ domain Amuc_0120 PF01594 AI-2E family transporter Amuc_0121 PF16385 Domain of unknown function Amuc_0121 PF00884 Sulfatase Amuc_0128 PF00521 DNA gyrase/topoisomerase IV, subunit A Amuc_0133 PF17762 HTH domain found in ParB protein Amuc_0133 PF02195 ParB-like nuclease domain Amuc_0139 PF13593 SBF-like CPA transporter family (DUF4137) Amuc_0140 PF00579 tRNA synthetases class I (W and Y) Amuc_0140 PF01479 S4 domain Amuc_0143 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_0143 PF12911 N-terminal TM domain of oligopeptide transport permease C Amuc_0144 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_0145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amuc_0148 PF16653 Saccharopine dehydrogenase C-terminal domain Amuc_0148 PF03435 Saccharopine dehydrogenase NADP binding domain Amuc_0153 PF02491 SHS2 domain inserted in FTSA Amuc_0155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amuc_0155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Amuc_0155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Amuc_0155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Amuc_0156 PF00005 ABC transporter Amuc_0156 PF00664 ABC transporter transmembrane region Amuc_0157 PF00005 ABC transporter Amuc_0157 PF00664 ABC transporter transmembrane region Amuc_0159 PF02405 Permease MlaE Amuc_0160 PF00005 ABC transporter Amuc_0161 PF02470 MlaD protein Amuc_0165 PF00437 Type II/IV secretion system protein Amuc_0166 PF00437 Type II/IV secretion system protein Amuc_0167 PF09312 SurA N-terminal domain Amuc_0167 PF00639 PPIC-type PPIASE domain Amuc_0169 PF02348 Cytidylyltransferase Amuc_0170 PF00117 Glutamine amidotransferase class-I Amuc_0170 PF06418 CTP synthase N-terminus Amuc_0171 PF00474 Sodium:solute symporter family Amuc_0176 PF13180 PDZ domain Amuc_0177 PF00905 Penicillin binding protein transpeptidase domain Amuc_0177 PF17092 Penicillin-binding protein OB-like domain Amuc_0177 PF00912 Transglycosylase Amuc_0178 PF02646 RmuC family Amuc_0179 PF13419 Haloacid dehalogenase-like hydrolase Amuc_0180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Amuc_0180 PF00132 Bacterial transferase hexapeptide (six repeats) Amuc_0182 PF02687 FtsX-like permease family Amuc_0182 PF12704 MacB-like periplasmic core domain Amuc_0187 PF04389 Peptidase family M28 Amuc_0188 PF13472 GDSL-like Lipase/Acylhydrolase family Amuc_0188 PF07859 alpha/beta hydrolase fold Amuc_0189 PF08264 Anticodon-binding domain of tRNA Amuc_0189 PF00133 tRNA synthetases class I (I, L, M and V) Amuc_0190 PF01252 Signal peptidase (SPase) II Amuc_0193 PF00266 Aminotransferase class-V Amuc_0194 PF12146 Serine aminopeptidase, S33 Amuc_0196 PF00069 Protein kinase domain Amuc_0196 PF08308 PEGA domain Amuc_0198 PF01245 Ribosomal protein L19 Amuc_0201 PF01039 Carboxyl transferase domain Amuc_0203 PF00364 Biotin-requiring enzyme Amuc_0203 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Amuc_0203 PF02785 Biotin carboxylase C-terminal domain Amuc_0203 PF00682 HMGL-like Amuc_0203 PF02436 Conserved carboxylase domain Amuc_0203 PF00289 Biotin carboxylase, N-terminal domain Amuc_0204 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Amuc_0205 PF03099 Biotin/lipoate A/B protein ligase family Amuc_0205 PF02237 Biotin protein ligase C terminal domain Amuc_0205 PF08279 HTH domain Amuc_0206 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Amuc_0206 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Amuc_0208 PF00483 Nucleotidyl transferase Amuc_0209 PF16363 GDP-mannose 4,6 dehydratase Amuc_0210 PF00365 Phosphofructokinase Amuc_0213 PF02934 GatB/GatE catalytic domain Amuc_0213 PF02637 GatB domain Amuc_0214 PF00205 Thiamine pyrophosphate enzyme, central domain Amuc_0214 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Amuc_0214 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amuc_0218 PF00689 Cation transporting ATPase, C-terminus Amuc_0218 PF00690 Cation transporter/ATPase, N-terminus Amuc_0219 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amuc_0219 PF00529 HlyD membrane-fusion protein of T1SS Amuc_0220 PF00873 AcrB/AcrD/AcrF family Amuc_0221 PF00939 Sodium:sulfate symporter transmembrane region Amuc_0223 PF08543 Phosphomethylpyrimidine kinase Amuc_0232 PF01327 Polypeptide deformylase Amuc_0233 PF08240 Alcohol dehydrogenase GroES-like domain Amuc_0233 PF00107 Zinc-binding dehydrogenase Amuc_0235 PF11897 Protein of unknown function (DUF3417) Amuc_0235 PF00343 Carbohydrate phosphorylase Amuc_0236 PF00027 Cyclic nucleotide-binding domain Amuc_0236 PF00520 Ion transport protein Amuc_0237 PF03960 ArsC family Amuc_0238 PF00753 Metallo-beta-lactamase superfamily Amuc_0238 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Amuc_0238 PF10996 Beta-Casp domain Amuc_0242 PF01479 S4 domain Amuc_0242 PF00849 RNA pseudouridylate synthase Amuc_0244 PF01746 tRNA (Guanine-1)-methyltransferase Amuc_0245 PF03462 PCRF domain Amuc_0245 PF00472 RF-1 domain Amuc_0247 PF00575 S1 RNA binding domain Amuc_0255 PF02548 Ketopantoate hydroxymethyltransferase Amuc_0256 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Amuc_0257 PF01113 Dihydrodipicolinate reductase, N-terminus Amuc_0257 PF05173 Dihydrodipicolinate reductase, C-terminus Amuc_0258 PF00701 Dihydrodipicolinate synthetase family Amuc_0260 PF00578 AhpC/TSA family Amuc_0263 PF07883 Cupin domain Amuc_0263 PF02130 Uncharacterized protein family UPF0054 Amuc_0264 PF07698 7TM receptor with intracellular HD hydrolase Amuc_0264 PF07697 7TM-HD extracellular Amuc_0264 PF01966 HD domain Amuc_0265 PF02504 Fatty acid synthesis protein Amuc_0266 PF01783 Ribosomal L32p protein family Amuc_0268 PF01230 HIT domain Amuc_0269 PF01300 Telomere recombination Amuc_0269 PF03481 Putative GTP-binding controlling metal-binding Amuc_0270 PF01202 Shikimate kinase Amuc_0271 PF00886 Ribosomal protein S16 Amuc_0273 PF02899 Phage integrase, N-terminal SAM-like domain Amuc_0273 PF00589 Phage integrase family Amuc_0275 PF02699 Preprotein translocase subunit Amuc_0276 PF01702 Queuine tRNA-ribosyltransferase Amuc_0277 PF02390 Putative methyltransferase Amuc_0279 PF03330 Lytic transglycolase Amuc_0279 PF05036 Sporulation related domain Amuc_0280 PF01351 Ribonuclease HII Amuc_0280 PF11858 Domain of unknown function (DUF3378) Amuc_0281 PF00216 Bacterial DNA-binding protein Amuc_0287 PF01618 MotA/TolQ/ExbB proton channel family Amuc_0290 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Amuc_0290 PF00703 Glycosyl hydrolases family 2 Amuc_0290 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Amuc_0290 PF02837 Glycosyl hydrolases family 2, sugar binding domain Amuc_0290 PF16355 Domain of unknown function (DUF4982) Amuc_0291 PF10458 Valyl tRNA synthetase tRNA binding arm Amuc_0291 PF00133 tRNA synthetases class I (I, L, M and V) Amuc_0291 PF08264 Anticodon-binding domain of tRNA Amuc_0293 PF00238 Ribosomal protein L14p/L23e Amuc_0294 PF00366 Ribosomal protein S17 Amuc_0295 PF00831 Ribosomal L29 protein Amuc_0296 PF00252 Ribosomal protein L16p/L10e Amuc_0297 PF00189 Ribosomal protein S3, C-terminal domain Amuc_0297 PF07650 KH domain Amuc_0298 PF00237 Ribosomal protein L22p/L17e Amuc_0300 PF00203 Ribosomal protein S19 Amuc_0301 PF03947 Ribosomal Proteins L2, C-terminal domain Amuc_0301 PF00181 Ribosomal Proteins L2, RNA binding domain Amuc_0302 PF00276 Ribosomal protein L23 Amuc_0303 PF00573 Ribosomal protein L4/L1 family Amuc_0304 PF00297 Ribosomal protein L3 Amuc_0305 PF00338 Ribosomal protein S10p/S20e Amuc_0306 PF00679 Elongation factor G C-terminus Amuc_0306 PF14492 Elongation Factor G, domain II Amuc_0306 PF03764 Elongation factor G, domain IV Amuc_0306 PF00009 Elongation factor Tu GTP binding domain Amuc_0306 PF03144 Elongation factor Tu domain 2 Amuc_0307 PF00177 Ribosomal protein S7p/S5e Amuc_0308 PF00164 Ribosomal protein S12/S23 Amuc_0309 PF01676 Metalloenzyme superfamily Amuc_0309 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Amuc_0311 PF00989 PAS fold Amuc_0311 PF00512 His Kinase A (phospho-acceptor) domain Amuc_0311 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_0312 PF00072 Response regulator receiver domain Amuc_0312 PF02954 Bacterial regulatory protein, Fis family Amuc_0312 PF00158 Sigma-54 interaction domain Amuc_0314 PF02609 Exonuclease VII small subunit Amuc_0315 PF02780 Transketolase, C-terminal domain Amuc_0315 PF02779 Transketolase, pyrimidine binding domain Amuc_0315 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Amuc_0318 PF03739 Lipopolysaccharide export system permease LptF/LptG Amuc_0319 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Amuc_0319 PF01926 50S ribosome-binding GTPase Amuc_0320 PF00005 ABC transporter Amuc_0320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amuc_0335 PF00005 ABC transporter Amuc_0335 PF02687 FtsX-like permease family Amuc_0335 PF12704 MacB-like periplasmic core domain Amuc_0337 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amuc_0337 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amuc_0343 PF02683 Cytochrome C biogenesis protein transmembrane region Amuc_0343 PF11412 Disulphide bond corrector protein DsbC Amuc_0346 PF00488 MutS domain V Amuc_0346 PF05190 MutS family domain IV Amuc_0346 PF05188 MutS domain II Amuc_0346 PF01624 MutS domain I Amuc_0346 PF05192 MutS domain III Amuc_0348 PF01434 Peptidase family M41 Amuc_0348 PF00004 ATPase family associated with various cellular activities (AAA) Amuc_0348 PF17862 AAA+ lid domain Amuc_0351 PF00378 Enoyl-CoA hydratase/isomerase Amuc_0358 PF00005 ABC transporter Amuc_0361 PF12857 TOBE-like domain Amuc_0361 PF00005 ABC transporter Amuc_0363 PF00106 short chain dehydrogenase Amuc_0366 PF02954 Bacterial regulatory protein, Fis family Amuc_0366 PF01590 GAF domain Amuc_0366 PF00158 Sigma-54 interaction domain Amuc_0367 PF00654 Voltage gated chloride channel Amuc_0369 PF07691 PA14 domain Amuc_0369 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_0369 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_0372 PF00282 Pyridoxal-dependent decarboxylase conserved domain Amuc_0374 PF07733 Bacterial DNA polymerase III alpha NTPase domain Amuc_0374 PF02811 PHP domain Amuc_0374 PF01336 OB-fold nucleic acid binding domain Amuc_0374 PF14579 Helix-hairpin-helix motif Amuc_0374 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Amuc_0375 PF01180 Dihydroorotate dehydrogenase Amuc_0376 PF02581 Thiamine monophosphate synthase Amuc_0376 PF17792 ThiD2 family Amuc_0380 PF03471 Transporter associated domain Amuc_0380 PF00571 CBS domain Amuc_0380 PF01595 Cyclin M transmembrane N-terminal domain Amuc_0381 PF01595 Cyclin M transmembrane N-terminal domain Amuc_0381 PF03471 Transporter associated domain Amuc_0381 PF00571 CBS domain Amuc_0382 PF00013 KH domain Amuc_0382 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amuc_0382 PF01138 3' exoribonuclease family, domain 1 Amuc_0382 PF03725 3' exoribonuclease family, domain 2 Amuc_0382 PF00575 S1 RNA binding domain Amuc_0383 PF00312 Ribosomal protein S15 Amuc_0384 PF00132 Bacterial transferase hexapeptide (six repeats) Amuc_0384 PF12464 Maltose acetyltransferase Amuc_0389 PF01416 tRNA pseudouridine synthase Amuc_0390 PF01467 Cytidylyltransferase-like Amuc_0394 PF07963 Prokaryotic N-terminal methylation motif Amuc_0394 PF14245 Type IV pilin PilA Amuc_0395 PF03725 3' exoribonuclease family, domain 2 Amuc_0395 PF01138 3' exoribonuclease family, domain 1 Amuc_0397 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_0397 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_0397 PF07691 PA14 domain Amuc_0400 PF02457 DisA bacterial checkpoint controller nucleotide-binding Amuc_0403 PF00005 ABC transporter Amuc_0404 PF02569 Pantoate-beta-alanine ligase Amuc_0406 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Amuc_0406 PF00132 Bacterial transferase hexapeptide (six repeats) Amuc_0407 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_0408 PF00005 ABC transporter Amuc_0414 PF13580 SIS domain Amuc_0415 PF01467 Cytidylyltransferase-like Amuc_0415 PF00294 pfkB family carbohydrate kinase Amuc_0416 PF01165 Ribosomal protein S21 Amuc_0417 PF00202 Aminotransferase class-III Amuc_0419 PF00083 Sugar (and other) transporter Amuc_0421 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Amuc_0421 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amuc_0422 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Amuc_0422 PF00925 GTP cyclohydrolase II Amuc_0423 PF00885 6,7-dimethyl-8-ribityllumazine synthase Amuc_0424 PF01029 NusB family Amuc_0425 PF00448 SRP54-type protein, GTPase domain Amuc_0425 PF02881 SRP54-type protein, helical bundle domain Amuc_0426 PF04055 Radical SAM superfamily Amuc_0427 PF03796 DnaB-like helicase C terminal domain Amuc_0427 PF00772 DnaB-like helicase N terminal domain Amuc_0429 PF04191 Phospholipid methyltransferase Amuc_0430 PF18146 Damage-inducible protein CinA KH domain Amuc_0430 PF02464 Competence-damaged protein Amuc_0430 PF00994 Probable molybdopterin binding domain Amuc_0431 PF02887 Pyruvate kinase, alpha/beta domain Amuc_0431 PF00224 Pyruvate kinase, barrel domain Amuc_0431 PF00391 PEP-utilising enzyme, mobile domain Amuc_0432 PF00583 Acetyltransferase (GNAT) family Amuc_0437 PF01479 S4 domain Amuc_0437 PF00163 Ribosomal protein S4/S9 N-terminal domain Amuc_0438 PF00411 Ribosomal protein S11 Amuc_0439 PF00416 Ribosomal protein S13/S18 Amuc_0440 PF08331 Domain of unknown function (DUF1730) Amuc_0443 PF17782 DprA winged helix domain Amuc_0443 PF02481 DNA recombination-mediator protein A Amuc_0444 PF00768 D-alanyl-D-alanine carboxypeptidase Amuc_0444 PF07943 Penicillin-binding protein 5, C-terminal domain Amuc_0445 PF06071 Protein of unknown function (DUF933) Amuc_0445 PF01926 50S ribosome-binding GTPase Amuc_0447 PF01597 Glycine cleavage H-protein Amuc_0448 PF02347 Glycine cleavage system P-protein Amuc_0451 PF16385 Domain of unknown function Amuc_0451 PF00884 Sulfatase Amuc_0452 PF00271 Helicase conserved C-terminal domain Amuc_0452 PF03880 DbpA RNA binding domain Amuc_0452 PF00270 DEAD/DEAH box helicase Amuc_0456 PF07681 DoxX Amuc_0457 PF02769 AIR synthase related protein, C-terminal domain Amuc_0457 PF00586 AIR synthase related protein, N-terminal domain Amuc_0458 PF00156 Phosphoribosyl transferase domain Amuc_0459 PF08281 Sigma-70, region 4 Amuc_0459 PF04542 Sigma-70 region 2 Amuc_0463 PF02441 Flavoprotein Amuc_0467 PF03976 Polyphosphate kinase 2 (PPK2) Amuc_0468 PF00455 DeoR C terminal sensor domain Amuc_0468 PF08220 DeoR-like helix-turn-helix domain Amuc_0470 PF00266 Aminotransferase class-V Amuc_0471 PF04127 DNA / pantothenate metabolism flavoprotein Amuc_0471 PF02441 Flavoprotein Amuc_0472 PF03193 RsgA GTPase Amuc_0478 PF03976 Polyphosphate kinase 2 (PPK2) Amuc_0480 PF08305 NPCBM/NEW2 domain Amuc_0482 PF12146 Serine aminopeptidase, S33 Amuc_0483 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Amuc_0485 PF01016 Ribosomal L27 protein Amuc_0486 PF01475 Ferric uptake regulator family Amuc_0487 PF00005 ABC transporter Amuc_0488 PF01458 Uncharacterized protein family (UPF0051) Amuc_0489 PF01458 Uncharacterized protein family (UPF0051) Amuc_0491 PF00884 Sulfatase Amuc_0492 PF04055 Radical SAM superfamily Amuc_0492 PF06968 Biotin and Thiamin Synthesis associated domain Amuc_0493 PF00202 Aminotransferase class-III Amuc_0499 PF00535 Glycosyl transferase family 2 Amuc_0501 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amuc_0505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Amuc_0505 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Amuc_0506 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amuc_0506 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amuc_0507 PF00231 ATP synthase Amuc_0508 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amuc_0508 PF00306 ATP synthase alpha/beta chain, C terminal domain Amuc_0508 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amuc_0509 PF00213 ATP synthase delta (OSCP) subunit Amuc_0510 PF00430 ATP synthase B/B' CF(0) Amuc_0511 PF00137 ATP synthase subunit C Amuc_0512 PF00119 ATP synthase A chain Amuc_0514 PF00905 Penicillin binding protein transpeptidase domain Amuc_0514 PF03717 Penicillin-binding Protein dimerisation domain Amuc_0522 PF00899 ThiF family Amuc_0523 PF01380 SIS domain Amuc_0523 PF00571 CBS domain Amuc_0527 PF00132 Bacterial transferase hexapeptide (six repeats) Amuc_0527 PF06426 Serine acetyltransferase, N-terminal Amuc_0528 PF00171 Aldehyde dehydrogenase family Amuc_0529 PF00696 Amino acid kinase family Amuc_0529 PF01472 PUA domain Amuc_0530 PF02779 Transketolase, pyrimidine binding domain Amuc_0530 PF00456 Transketolase, thiamine diphosphate binding domain Amuc_0530 PF02780 Transketolase, C-terminal domain Amuc_0531 PF01272 Transcription elongation factor, GreA/GreB, C-term Amuc_0531 PF03449 Transcription elongation factor, N-terminal Amuc_0532 PF01259 SAICAR synthetase Amuc_0534 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Amuc_0534 PF00586 AIR synthase related protein, N-terminal domain Amuc_0534 PF02769 AIR synthase related protein, C-terminal domain Amuc_0537 PF05343 M42 glutamyl aminopeptidase Amuc_0539 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Amuc_0539 PF02837 Glycosyl hydrolases family 2, sugar binding domain Amuc_0539 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Amuc_0539 PF00703 Glycosyl hydrolases family 2 Amuc_0541 PF00575 S1 RNA binding domain Amuc_0541 PF10150 Ribonuclease E/G family Amuc_0546 PF02472 Biopolymer transport protein ExbD/TolR Amuc_0549 PF00730 HhH-GPD superfamily base excision DNA repair protein Amuc_0552 PF00218 Indole-3-glycerol phosphate synthase Amuc_0553 PF02021 Uncharacterised protein family UPF0102 Amuc_0554 PF01351 Ribonuclease HII Amuc_0555 PF01595 Cyclin M transmembrane N-terminal domain Amuc_0555 PF03471 Transporter associated domain Amuc_0555 PF00571 CBS domain Amuc_0557 PF00253 Ribosomal protein S14p/S29e Amuc_0559 PF00764 Arginosuccinate synthase Amuc_0561 PF01189 16S rRNA methyltransferase RsmB/F Amuc_0561 PF01029 NusB family Amuc_0562 PF00121 Triosephosphate isomerase Amuc_0565 PF00884 Sulfatase Amuc_0571 PF03819 MazG nucleotide pyrophosphohydrolase domain Amuc_0573 PF00570 HRDC domain Amuc_0573 PF01612 3'-5' exonuclease Amuc_0575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Amuc_0576 PF00675 Insulinase (Peptidase family M16) Amuc_0576 PF05193 Peptidase M16 inactive domain Amuc_0581 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain Amuc_0581 PF01118 Semialdehyde dehydrogenase, NAD binding domain Amuc_0582 PF03734 L,D-transpeptidase catalytic domain Amuc_0585 PF00585 C-terminal regulatory domain of Threonine dehydratase Amuc_0585 PF00291 Pyridoxal-phosphate dependent enzyme Amuc_0586 PF02545 Maf-like protein Amuc_0587 PF13167 GTP-binding GTPase N-terminal Amuc_0587 PF16360 GTP-binding GTPase Middle Region Amuc_0587 PF01926 50S ribosome-binding GTPase Amuc_0589 PF00069 Protein kinase domain Amuc_0589 PF03793 PASTA domain Amuc_0592 PF00586 AIR synthase related protein, N-terminal domain Amuc_0592 PF02769 AIR synthase related protein, C-terminal domain Amuc_0594 PF02224 Cytidylate kinase Amuc_0596 PF02463 RecF/RecN/SMC N terminal domain Amuc_0598 PF14622 Ribonuclease-III-like Amuc_0598 PF00035 Double-stranded RNA binding motif Amuc_0600 PF02899 Phage integrase, N-terminal SAM-like domain Amuc_0600 PF00589 Phage integrase family Amuc_0607 PF03372 Endonuclease/Exonuclease/phosphatase family Amuc_0608 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amuc_0611 PF01502 Phosphoribosyl-AMP cyclohydrolase Amuc_0612 PF09115 DNA polymerase III, delta subunit, C terminal Amuc_0615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Amuc_0615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Amuc_0615 PF02142 MGS-like domain Amuc_0618 PF08241 Methyltransferase domain Amuc_0620 PF00795 Carbon-nitrogen hydrolase Amuc_0620 PF02540 NAD synthase Amuc_0621 PF00893 Small Multidrug Resistance protein Amuc_0623 PF13859 BNR repeat-like domain Amuc_0629 PF05491 RuvB C-terminal winged helix domain Amuc_0629 PF05496 Holliday junction DNA helicase RuvB P-loop domain Amuc_0629 PF17864 RuvB AAA lid domain Amuc_0630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amuc_0630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Amuc_0631 PF00667 FAD binding domain Amuc_0631 PF00175 Oxidoreductase NAD-binding domain Amuc_0631 PF00258 Flavodoxin Amuc_0632 PF00535 Glycosyl transferase family 2 Amuc_0633 PF00535 Glycosyl transferase family 2 Amuc_0638 PF00534 Glycosyl transferases group 1 Amuc_0640 PF01757 Acyltransferase family Amuc_0645 PF12631 MnmE helical domain Amuc_0645 PF10396 GTP-binding protein TrmE N-terminus Amuc_0645 PF01926 50S ribosome-binding GTPase Amuc_0647 PF03458 UPF0126 domain Amuc_0648 PF10996 Beta-Casp domain Amuc_0648 PF00753 Metallo-beta-lactamase superfamily Amuc_0648 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Amuc_0649 PF02381 MraZ protein, putative antitoxin-like Amuc_0650 PF01795 MraW methylase family Amuc_0652 PF03793 PASTA domain Amuc_0652 PF00905 Penicillin binding protein transpeptidase domain Amuc_0652 PF03717 Penicillin-binding Protein dimerisation domain Amuc_0653 PF02875 Mur ligase family, glutamate ligase domain Amuc_0653 PF01225 Mur ligase family, catalytic domain Amuc_0653 PF08245 Mur ligase middle domain Amuc_0654 PF08245 Mur ligase middle domain Amuc_0654 PF01225 Mur ligase family, catalytic domain Amuc_0654 PF02875 Mur ligase family, glutamate ligase domain Amuc_0655 PF00953 Glycosyl transferase family 4 Amuc_0655 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Amuc_0656 PF08245 Mur ligase middle domain Amuc_0656 PF02875 Mur ligase family, glutamate ligase domain Amuc_0658 PF01098 Cell cycle protein Amuc_0659 PF03033 Glycosyltransferase family 28 N-terminal domain Amuc_0659 PF04101 Glycosyltransferase family 28 C-terminal domain Amuc_0660 PF08245 Mur ligase middle domain Amuc_0660 PF01225 Mur ligase family, catalytic domain Amuc_0660 PF02875 Mur ligase family, glutamate ligase domain Amuc_0661 PF07478 D-ala D-ala ligase C-terminus Amuc_0661 PF01820 D-ala D-ala ligase N-terminus Amuc_0663 PF00154 recA bacterial DNA recombination protein Amuc_0664 PF01520 N-acetylmuramoyl-L-alanine amidase Amuc_0665 PF03099 Biotin/lipoate A/B protein ligase family Amuc_0666 PF00330 Aconitase family (aconitate hydratase) Amuc_0667 PF00694 Aconitase C-terminal domain Amuc_0669 PF17820 PDZ domain Amuc_0669 PF13180 PDZ domain Amuc_0671 PF01761 3-dehydroquinate synthase Amuc_0672 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amuc_0672 PF00005 ABC transporter Amuc_0673 PF00889 Elongation factor TS Amuc_0676 PF00793 DAHP synthetase I family Amuc_0679 PF00005 ABC transporter Amuc_0679 PF12399 Branched-chain amino acid ATP-binding cassette transporter Amuc_0681 PF08245 Mur ligase middle domain Amuc_0681 PF02875 Mur ligase family, glutamate ligase domain Amuc_0681 PF01225 Mur ligase family, catalytic domain Amuc_0682 PF00691 OmpA family Amuc_0683 PF00580 UvrD/REP helicase N-terminal domain Amuc_0683 PF13361 UvrD-like helicase C-terminal domain Amuc_0684 PF01638 HxlR-like helix-turn-helix Amuc_0686 PF00005 ABC transporter Amuc_0686 PF17760 UvrA interaction domain Amuc_0686 PF17755 UvrA DNA-binding domain Amuc_0689 PF00152 tRNA synthetases class II (D, K and N) Amuc_0689 PF01336 OB-fold nucleic acid binding domain Amuc_0691 PF00085 Thioredoxin Amuc_0701 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amuc_0701 PF03466 LysR substrate binding domain Amuc_0702 PF03601 Conserved hypothetical protein 698 Amuc_0703 PF00266 Aminotransferase class-V Amuc_0705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amuc_0705 PF01842 ACT domain Amuc_0705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amuc_0707 PF04055 Radical SAM superfamily Amuc_0708 PF07498 Rho termination factor, N-terminal domain Amuc_0708 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amuc_0708 PF07497 Rho termination factor, RNA-binding domain Amuc_0709 PF01709 Transcriptional regulator Amuc_0710 PF01545 Cation efflux family Amuc_0710 PF16916 Dimerisation domain of Zinc Transporter Amuc_0711 PF00999 Sodium/hydrogen exchanger family Amuc_0711 PF02254 TrkA-N domain Amuc_0713 PF02547 Queuosine biosynthesis protein Amuc_0714 PF12127 SigmaW regulon antibacterial Amuc_0716 PF05690 Thiazole biosynthesis protein ThiG Amuc_0717 PF13520 Amino acid permease Amuc_0719 PF01594 AI-2E family transporter Amuc_0720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Amuc_0720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amuc_0721 PF01116 Fructose-bisphosphate aldolase class-II Amuc_0723 PF01063 Amino-transferase class IV Amuc_0724 PF00722 Glycosyl hydrolases family 16 Amuc_0725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Amuc_0725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Amuc_0728 PF01018 GTP1/OBG Amuc_0728 PF01926 50S ribosome-binding GTPase Amuc_0729 PF01636 Phosphotransferase enzyme family Amuc_0736 PF01451 Low molecular weight phosphotyrosine protein phosphatase Amuc_0737 PF00571 CBS domain Amuc_0737 PF00478 IMP dehydrogenase / GMP reductase domain Amuc_0738 PF02540 NAD synthase Amuc_0738 PF00117 Glutamine amidotransferase class-I Amuc_0738 PF00958 GMP synthase C terminal domain Amuc_0739 PF12464 Maltose acetyltransferase Amuc_0739 PF14602 Hexapeptide repeat of succinyl-transferase Amuc_0740 PF13419 Haloacid dehalogenase-like hydrolase Amuc_0744 PF00793 DAHP synthetase I family Amuc_0745 PF00114 Pilin (bacterial filament) Amuc_0745 PF07963 Prokaryotic N-terminal methylation motif Amuc_0747 PF02261 Aspartate decarboxylase Amuc_0748 PF01687 Riboflavin kinase Amuc_0748 PF06574 FAD synthetase Amuc_0749 PF01509 TruB family pseudouridylate synthase (N terminal domain) Amuc_0749 PF16198 tRNA pseudouridylate synthase B C-terminal domain Amuc_0752 PF00149 Calcineurin-like phosphoesterase Amuc_0753 PF08759 Glycosyltransferase GT-D fold Amuc_0753 PF01501 Glycosyl transferase family 8 Amuc_0754 PF00535 Glycosyl transferase family 2 Amuc_0754 PF01501 Glycosyl transferase family 8 Amuc_0756 PF01370 NAD dependent epimerase/dehydratase family Amuc_0757 PF00535 Glycosyl transferase family 2 Amuc_0761 PF01757 Acyltransferase family Amuc_0766 PF03600 Citrate transporter Amuc_0766 PF02080 TrkA-C domain Amuc_0771 PF01301 Glycosyl hydrolases family 35 Amuc_0772 PF00300 Histidine phosphatase superfamily (branch 1) Amuc_0773 PF01757 Acyltransferase family Amuc_0774 PF07690 Major Facilitator Superfamily Amuc_0775 PF03061 Thioesterase superfamily Amuc_0779 PF00565 Staphylococcal nuclease homologue Amuc_0782 PF02195 ParB-like nuclease domain Amuc_0783 PF01507 Phosphoadenosine phosphosulfate reductase family Amuc_0783 PF11922 Domain of unknown function (DUF3440) Amuc_0785 PF00180 Isocitrate/isopropylmalate dehydrogenase Amuc_0788 PF01078 Magnesium chelatase, subunit ChlI Amuc_0788 PF13335 Magnesium chelatase, subunit ChlI C-terminal Amuc_0790 PF01053 Cys/Met metabolism PLP-dependent enzyme Amuc_0792 PF13186 Iron-sulfur cluster-binding domain Amuc_0792 PF04055 Radical SAM superfamily Amuc_0795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amuc_0795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amuc_0796 PF02660 Glycerol-3-phosphate acyltransferase Amuc_0798 PF01336 OB-fold nucleic acid binding domain Amuc_0798 PF00152 tRNA synthetases class II (D, K and N) Amuc_0802 PF01638 HxlR-like helix-turn-helix Amuc_0804 PF00977 Histidine biosynthesis protein Amuc_0806 PF02386 Cation transport protein Amuc_0808 PF11898 Domain of unknown function (DUF3418) Amuc_0808 PF00270 DEAD/DEAH box helicase Amuc_0808 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Amuc_0808 PF00271 Helicase conserved C-terminal domain Amuc_0808 PF04408 Helicase associated domain (HA2) Amuc_0809 PF10369 Small subunit of acetolactate synthase Amuc_0810 PF00595 PDZ domain Amuc_0810 PF13180 PDZ domain Amuc_0812 PF01134 Glucose inhibited division protein A Amuc_0812 PF13932 GidA associated domain Amuc_0813 PF01872 RibD C-terminal domain Amuc_0813 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amuc_0814 PF00132 Bacterial transferase hexapeptide (six repeats) Amuc_0814 PF14602 Hexapeptide repeat of succinyl-transferase Amuc_0814 PF12804 MobA-like NTP transferase domain Amuc_0816 PF00712 DNA polymerase III beta subunit, N-terminal domain Amuc_0816 PF02767 DNA polymerase III beta subunit, central domain Amuc_0816 PF02768 DNA polymerase III beta subunit, C-terminal domain Amuc_0821 PF00877 NlpC/P60 family Amuc_0821 PF01476 LysM domain Amuc_0822 PF01026 TatD related DNase Amuc_0824 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Amuc_0824 PF00703 Glycosyl hydrolases family 2 Amuc_0824 PF02837 Glycosyl hydrolases family 2, sugar binding domain Amuc_0824 PF16353 Domain of unknown function(DUF4981) Amuc_0824 PF02929 Beta galactosidase small chain Amuc_0827 PF00512 His Kinase A (phospho-acceptor) domain Amuc_0827 PF02702 Osmosensitive K+ channel His kinase sensor domain Amuc_0827 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_0827 PF13492 GAF domain Amuc_0827 PF13493 Domain of unknown function (DUF4118) Amuc_0828 PF00072 Response regulator receiver domain Amuc_0828 PF00486 Transcriptional regulatory protein, C terminal Amuc_0830 PF03814 Potassium-transporting ATPase A subunit Amuc_0832 PF02669 K+-transporting ATPase, c chain Amuc_0836 PF02861 Clp amino terminal domain, pathogenicity island component Amuc_0836 PF10431 C-terminal, D2-small domain, of ClpB protein Amuc_0836 PF17871 AAA lid domain Amuc_0836 PF07724 AAA domain (Cdc48 subfamily) Amuc_0836 PF00004 ATPase family associated with various cellular activities (AAA) Amuc_0838 PF03477 ATP cone domain Amuc_0840 PF01740 STAS domain Amuc_0840 PF00916 Sulfate permease family Amuc_0841 PF14698 Argininosuccinate lyase C-terminal Amuc_0841 PF00206 Lyase Amuc_0844 PF03952 Enolase, N-terminal domain Amuc_0844 PF00113 Enolase, C-terminal TIM barrel domain Amuc_0845 PF01261 Xylose isomerase-like TIM barrel Amuc_0846 PF02973 Sialidase, N-terminal domain Amuc_0846 PF00754 F5/8 type C domain Amuc_0846 PF13088 BNR repeat-like domain Amuc_0847 PF01336 OB-fold nucleic acid binding domain Amuc_0847 PF01966 HD domain Amuc_0849 PF01938 TRAM domain Amuc_0849 PF04055 Radical SAM superfamily Amuc_0849 PF00919 Uncharacterized protein family UPF0004 Amuc_0850 PF05958 tRNA (Uracil-5-)-methyltransferase Amuc_0850 PF01938 TRAM domain Amuc_0854 PF00216 Bacterial DNA-binding protein Amuc_0855 PF16875 Glycosyl hydrolase family 36 N-terminal domain Amuc_0855 PF16874 Glycosyl hydrolase family 36 C-terminal domain Amuc_0856 PF06826 Predicted Permease Membrane Region Amuc_0856 PF02080 TrkA-C domain Amuc_0858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_0858 PF00512 His Kinase A (phospho-acceptor) domain Amuc_0858 PF00989 PAS fold Amuc_0859 PF00939 Sodium:sulfate symporter transmembrane region Amuc_0864 PF08019 Phosphoethanolamine transferase EptA/EptB Amuc_0864 PF00884 Sulfatase Amuc_0865 PF02915 Rubrerythrin Amuc_0867 PF05343 M42 glutamyl aminopeptidase Amuc_0868 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_0868 PF07691 PA14 domain Amuc_0868 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_0870 PF00245 Alkaline phosphatase Amuc_0871 PF01741 Large-conductance mechanosensitive channel, MscL Amuc_0872 PF00202 Aminotransferase class-III Amuc_0874 PF08207 Elongation factor P (EF-P) KOW-like domain Amuc_0874 PF01132 Elongation factor P (EF-P) OB domain Amuc_0874 PF09285 Elongation factor P, C-terminal Amuc_0875 PF00722 Glycosyl hydrolases family 16 Amuc_0876 PF00403 Heavy-metal-associated domain Amuc_0877 PF02463 RecF/RecN/SMC N terminal domain Amuc_0878 PF03099 Biotin/lipoate A/B protein ligase family Amuc_0878 PF12706 Beta-lactamase superfamily domain Amuc_0879 PF03808 Glycosyl transferase WecB/TagA/CpsF family Amuc_0885 PF00364 Biotin-requiring enzyme Amuc_0885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Amuc_0885 PF02817 e3 binding domain Amuc_0886 PF02779 Transketolase, pyrimidine binding domain Amuc_0886 PF02780 Transketolase, C-terminal domain Amuc_0887 PF02780 Transketolase, C-terminal domain Amuc_0887 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Amuc_0887 PF02779 Transketolase, pyrimidine binding domain Amuc_0888 PF13411 MerR HTH family regulatory protein Amuc_0889 PF00529 HlyD membrane-fusion protein of T1SS Amuc_0889 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amuc_0890 PF00873 AcrB/AcrD/AcrF family Amuc_0898 PF01131 DNA topoisomerase Amuc_0898 PF01751 Toprim domain Amuc_0903 PF01510 N-acetylmuramoyl-L-alanine amidase Amuc_0903 PF01476 LysM domain Amuc_0903 PF01471 Putative peptidoglycan binding domain Amuc_0904 PF00330 Aconitase family (aconitate hydratase) Amuc_0904 PF00694 Aconitase C-terminal domain Amuc_0906 PF01625 Peptide methionine sulfoxide reductase Amuc_0906 PF01641 SelR domain Amuc_0909 PF01139 tRNA-splicing ligase RtcB Amuc_0911 PF07690 Major Facilitator Superfamily Amuc_0913 PF01923 Cobalamin adenosyltransferase Amuc_0915 PF00773 RNB domain Amuc_0915 PF08206 Ribonuclease B OB domain Amuc_0915 PF00575 S1 RNA binding domain Amuc_0915 PF17876 Cold shock domain Amuc_0917 PF12392 Collagenase Amuc_0917 PF01136 Peptidase family U32 Amuc_0918 PF02875 Mur ligase family, glutamate ligase domain Amuc_0918 PF08245 Mur ligase middle domain Amuc_0920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amuc_0921 PF12419 SNF2 Helicase protein Amuc_0921 PF00176 SNF2 family N-terminal domain Amuc_0921 PF00271 Helicase conserved C-terminal domain Amuc_0922 PF02872 5'-nucleotidase, C-terminal domain Amuc_0922 PF00149 Calcineurin-like phosphoesterase Amuc_0923 PF03330 Lytic transglycolase Amuc_0923 PF05036 Sporulation related domain Amuc_0924 PF01513 ATP-NAD kinase Amuc_0925 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Amuc_0925 PF00467 KOW motif Amuc_0926 PF00281 Ribosomal protein L5 Amuc_0926 PF00673 ribosomal L5P family C-terminus Amuc_0927 PF00410 Ribosomal protein S8 Amuc_0928 PF00347 Ribosomal protein L6 Amuc_0929 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Amuc_0930 PF03719 Ribosomal protein S5, C-terminal domain Amuc_0930 PF00333 Ribosomal protein S5, N-terminal domain Amuc_0931 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Amuc_0933 PF00344 SecY translocase Amuc_0934 PF05191 Adenylate kinase, active site lid Amuc_0935 PF00557 Metallopeptidase family M24 Amuc_0938 PF13090 Polyphosphate kinase C-terminal domain 2 Amuc_0938 PF17941 Polyphosphate kinase C-terminal domain 1 Amuc_0938 PF13089 Polyphosphate kinase N-terminal domain Amuc_0938 PF02503 Polyphosphate kinase middle domain Amuc_0939 PF01501 Glycosyl transferase family 8 Amuc_0941 PF00535 Glycosyl transferase family 2 Amuc_0942 PF01531 Glycosyl transferase family 11 Amuc_0943 PF00535 Glycosyl transferase family 2 Amuc_0945 PF00535 Glycosyl transferase family 2 Amuc_0946 PF01965 DJ-1/PfpI family Amuc_0947 PF02817 e3 binding domain Amuc_0947 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Amuc_0947 PF00364 Biotin-requiring enzyme Amuc_0948 PF01979 Amidohydrolase family Amuc_0949 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Amuc_0951 PF02554 Carbon starvation protein CstA Amuc_0953 PF00884 Sulfatase Amuc_0955 PF02033 Ribosome-binding factor A Amuc_0956 PF11987 Translation-initiation factor 2 Amuc_0956 PF04760 Translation initiation factor IF-2, N-terminal region Amuc_0956 PF00009 Elongation factor Tu GTP binding domain Amuc_0957 PF00575 S1 RNA binding domain Amuc_0957 PF13184 NusA-like KH domain Amuc_0957 PF08529 NusA N-terminal domain Amuc_0958 PF03372 Endonuclease/Exonuclease/phosphatase family Amuc_0959 PF01725 Ham1 family Amuc_0960 PF06962 Putative rRNA methylase Amuc_0961 PF04015 Domain of unknown function (DUF362) Amuc_0963 PF01061 ABC-2 type transporter Amuc_0963 PF00498 FHA domain Amuc_0963 PF00005 ABC transporter Amuc_0967 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Amuc_0968 PF02397 Bacterial sugar transferase Amuc_0969 PF10509 Galactokinase galactose-binding signature Amuc_0969 PF08544 GHMP kinases C terminal Amuc_0969 PF00288 GHMP kinases N terminal domain Amuc_0970 PF00474 Sodium:solute symporter family Amuc_0971 PF00580 UvrD/REP helicase N-terminal domain Amuc_0971 PF13361 UvrD-like helicase C-terminal domain Amuc_0972 PF02911 Formyl transferase, C-terminal domain Amuc_0972 PF00551 Formyl transferase Amuc_0974 PF03309 Type III pantothenate kinase Amuc_0975 PF00550 Phosphopantetheine attachment site Amuc_0978 PF02580 D-Tyr-tRNA(Tyr) deacylase Amuc_0984 PF13085 2Fe-2S iron-sulfur cluster binding domain Amuc_0985 PF00890 FAD binding domain Amuc_0985 PF02910 Fumarate reductase flavoprotein C-term Amuc_0996 PF16326 ABC transporter C-terminal domain Amuc_0996 PF12848 ABC transporter Amuc_0996 PF00005 ABC transporter Amuc_0999 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Amuc_0999 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Amuc_1003 PF12146 Serine aminopeptidase, S33 Amuc_1005 PF00248 Aldo/keto reductase family Amuc_1006 PF00248 Aldo/keto reductase family Amuc_1008 PF17137 Domain of unknown function (DUF5110) Amuc_1008 PF16338 Domain of unknown function (DUF4968) Amuc_1008 PF13802 Galactose mutarotase-like Amuc_1008 PF01055 Glycosyl hydrolases family 31 Amuc_1010 PF04397 LytTr DNA-binding domain Amuc_1010 PF00072 Response regulator receiver domain Amuc_1017 PF00561 alpha/beta hydrolase fold Amuc_1018 PF01914 MarC family integral membrane protein Amuc_1026 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Amuc_1027 PF16326 ABC transporter C-terminal domain Amuc_1027 PF12848 ABC transporter Amuc_1027 PF00005 ABC transporter Amuc_1029 PF00892 EamA-like transporter family Amuc_1031 PF01406 tRNA synthetases class I (C) catalytic domain Amuc_1031 PF09190 DALR domain Amuc_1032 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_1032 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_1033 PF16347 Domain of unknown function (DUF4976) Amuc_1033 PF00884 Sulfatase Amuc_1036 PF00009 Elongation factor Tu GTP binding domain Amuc_1036 PF03144 Elongation factor Tu domain 2 Amuc_1036 PF06421 GTP-binding protein LepA C-terminus Amuc_1036 PF00679 Elongation factor G C-terminus Amuc_1040 PF04983 RNA polymerase Rpb1, domain 3 Amuc_1040 PF00623 RNA polymerase Rpb1, domain 2 Amuc_1040 PF04998 RNA polymerase Rpb1, domain 5 Amuc_1040 PF05000 RNA polymerase Rpb1, domain 4 Amuc_1040 PF04997 RNA polymerase Rpb1, domain 1 Amuc_1041 PF04563 RNA polymerase beta subunit Amuc_1041 PF04565 RNA polymerase Rpb2, domain 3 Amuc_1041 PF10385 RNA polymerase beta subunit external 1 domain Amuc_1041 PF00562 RNA polymerase Rpb2, domain 6 Amuc_1041 PF04560 RNA polymerase Rpb2, domain 7 Amuc_1041 PF04561 RNA polymerase Rpb2, domain 2 Amuc_1042 PF00542 Ribosomal protein L7/L12 C-terminal domain Amuc_1042 PF16320 Ribosomal protein L7/L12 dimerisation domain Amuc_1043 PF00466 Ribosomal protein L10 Amuc_1044 PF00687 Ribosomal protein L1p/L10e family Amuc_1045 PF00298 Ribosomal protein L11, RNA binding domain Amuc_1045 PF03946 Ribosomal protein L11, N-terminal domain Amuc_1046 PF00467 KOW motif Amuc_1046 PF02357 Transcription termination factor nusG Amuc_1048 PF03143 Elongation factor Tu C-terminal domain Amuc_1048 PF00009 Elongation factor Tu GTP binding domain Amuc_1048 PF03144 Elongation factor Tu domain 2 Amuc_1049 PF00814 Glycoprotease family Amuc_1050 PF07724 AAA domain (Cdc48 subfamily) Amuc_1050 PF10431 C-terminal, D2-small domain, of ClpB protein Amuc_1050 PF06689 ClpX C4-type zinc finger Amuc_1051 PF00574 Clp protease Amuc_1052 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Amuc_1052 PF05697 Bacterial trigger factor protein (TF) Amuc_1052 PF05698 Bacterial trigger factor protein (TF) C-terminus Amuc_1053 PF01103 Surface antigen Amuc_1053 PF07244 Surface antigen variable number repeat Amuc_1055 PF02219 Methylenetetrahydrofolate reductase Amuc_1059 PF00873 AcrB/AcrD/AcrF family Amuc_1067 PF13649 Methyltransferase domain Amuc_1068 PF00438 S-adenosylmethionine synthetase, N-terminal domain Amuc_1068 PF02772 S-adenosylmethionine synthetase, central domain Amuc_1068 PF02773 S-adenosylmethionine synthetase, C-terminal domain Amuc_1069 PF05221 S-adenosyl-L-homocysteine hydrolase Amuc_1069 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Amuc_1072 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Amuc_1074 PF16347 Domain of unknown function (DUF4976) Amuc_1074 PF00884 Sulfatase Amuc_1075 PF16124 RecQ zinc-binding Amuc_1075 PF00270 DEAD/DEAH box helicase Amuc_1075 PF00271 Helicase conserved C-terminal domain Amuc_1075 PF09382 RQC domain Amuc_1075 PF00570 HRDC domain Amuc_1077 PF00534 Glycosyl transferases group 1 Amuc_1079 PF00890 FAD binding domain Amuc_1079 PF02910 Fumarate reductase flavoprotein C-term Amuc_1080 PF08032 RNA 2'-O ribose methyltransferase substrate binding Amuc_1080 PF00588 SpoU rRNA Methylase family Amuc_1088 PF07670 Nucleoside recognition Amuc_1088 PF02421 Ferrous iron transport protein B Amuc_1088 PF17910 FeoB cytosolic helical domain Amuc_1088 PF07664 Ferrous iron transport protein B C terminus Amuc_1091 PF14376 Haem-binding domain Amuc_1091 PF00034 Cytochrome c Amuc_1091 PF03150 Di-haem cytochrome c peroxidase Amuc_1092 PF04055 Radical SAM superfamily Amuc_1092 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Amuc_1093 PF14437 MafB19-like deaminase Amuc_1094 PF00480 ROK family Amuc_1095 PF00403 Heavy-metal-associated domain Amuc_1096 PF07498 Rho termination factor, N-terminal domain Amuc_1096 PF07497 Rho termination factor, RNA-binding domain Amuc_1096 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amuc_1097 PF01121 Dephospho-CoA kinase Amuc_1098 PF03958 Bacterial type II/III secretion system short domain Amuc_1098 PF00263 Bacterial type II and III secretion system protein Amuc_1103 PF05343 M42 glutamyl aminopeptidase Amuc_1104 PF01790 Prolipoprotein diacylglyceryl transferase Amuc_1106 PF05195 Aminopeptidase P, N-terminal domain Amuc_1106 PF00557 Metallopeptidase family M24 Amuc_1107 PF01634 ATP phosphoribosyltransferase Amuc_1107 PF08029 HisG, C-terminal domain Amuc_1109 PF00672 HAMP domain Amuc_1109 PF00512 His Kinase A (phospho-acceptor) domain Amuc_1109 PF13426 PAS domain Amuc_1109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_1110 PF00072 Response regulator receiver domain Amuc_1110 PF00486 Transcriptional regulatory protein, C terminal Amuc_1111 PF00920 Dehydratase family Amuc_1118 PF00884 Sulfatase Amuc_1125 PF01370 NAD dependent epimerase/dehydratase family Amuc_1126 PF00398 Ribosomal RNA adenine dimethylase Amuc_1131 PF01554 MatE Amuc_1132 PF02386 Cation transport protein Amuc_1134 PF13539 D-alanyl-D-alanine carboxypeptidase Amuc_1143 PF05593 RHS Repeat Amuc_1143 PF14220 Domain of unknown function (DUF4329) Amuc_1143 PF03527 RHS protein Amuc_1151 PF03814 Potassium-transporting ATPase A subunit Amuc_1153 PF02669 K+-transporting ATPase, c chain Amuc_1154 PF02702 Osmosensitive K+ channel His kinase sensor domain Amuc_1154 PF13493 Domain of unknown function (DUF4118) Amuc_1154 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_1154 PF00512 His Kinase A (phospho-acceptor) domain Amuc_1154 PF13492 GAF domain Amuc_1155 PF03781 Sulfatase-modifying factor enzyme 1 Amuc_1155 PF12867 DinB superfamily Amuc_1157 PF16123 Hydroxyacylglutathione hydrolase C-terminus Amuc_1157 PF00753 Metallo-beta-lactamase superfamily Amuc_1159 PF00069 Protein kinase domain Amuc_1159 PF03793 PASTA domain Amuc_1160 PF00248 Aldo/keto reductase family Amuc_1161 PF13411 MerR HTH family regulatory protein Amuc_1162 PF01212 Beta-eliminating lyase Amuc_1168 PF00005 ABC transporter Amuc_1170 PF07726 ATPase family associated with various cellular activities (AAA) Amuc_1170 PF17863 AAA lid domain Amuc_1171 PF04235 Protein of unknown function (DUF418) Amuc_1176 PF01370 NAD dependent epimerase/dehydratase family Amuc_1176 PF08338 Domain of unknown function (DUF1731) Amuc_1178 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Amuc_1178 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Amuc_1179 PF00005 ABC transporter Amuc_1180 PF07729 FCD domain Amuc_1180 PF00392 Bacterial regulatory proteins, gntR family Amuc_1182 PF00884 Sulfatase Amuc_1184 PF00113 Enolase, C-terminal TIM barrel domain Amuc_1184 PF03952 Enolase, N-terminal domain Amuc_1186 PF02424 ApbE family Amuc_1189 PF00830 Ribosomal L28 family Amuc_1191 PF03652 Holliday junction resolvase Amuc_1192 PF00483 Nucleotidyl transferase Amuc_1192 PF01050 Mannose-6-phosphate isomerase Amuc_1193 PF01255 Putative undecaprenyl diphosphate synthase Amuc_1194 PF00986 DNA gyrase B subunit, carboxyl terminus Amuc_1194 PF00204 DNA gyrase B Amuc_1194 PF01751 Toprim domain Amuc_1194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_1195 PF00288 GHMP kinases N terminal domain Amuc_1197 PF06733 DEAD_2 Amuc_1197 PF13307 Helicase C-terminal domain Amuc_1198 PF00005 ABC transporter Amuc_1203 PF00696 Amino acid kinase family Amuc_1204 PF01544 CorA-like Mg2+ transporter protein Amuc_1205 PF01281 Ribosomal protein L9, N-terminal domain Amuc_1205 PF03948 Ribosomal protein L9, C-terminal domain Amuc_1206 PF01808 AICARFT/IMPCHase bienzyme Amuc_1206 PF02142 MGS-like domain Amuc_1207 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Amuc_1208 PF01648 4'-phosphopantetheinyl transferase superfamily Amuc_1210 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Amuc_1210 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Amuc_1211 PF01476 LysM domain Amuc_1211 PF01510 N-acetylmuramoyl-L-alanine amidase Amuc_1211 PF01471 Putative peptidoglycan binding domain Amuc_1212 PF17191 RecG wedge domain Amuc_1212 PF00270 DEAD/DEAH box helicase Amuc_1212 PF00271 Helicase conserved C-terminal domain Amuc_1214 PF13247 4Fe-4S dicluster domain Amuc_1214 PF00037 4Fe-4S binding domain Amuc_1216 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amuc_1218 PF01761 3-dehydroquinate synthase Amuc_1223 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Amuc_1225 PF00571 CBS domain Amuc_1225 PF02833 DHHA2 domain Amuc_1225 PF01368 DHH family Amuc_1225 PF07085 DRTGG domain Amuc_1227 PF02575 YbaB/EbfC DNA-binding family Amuc_1228 PF12169 DNA polymerase III subunits gamma and tau domain III Amuc_1231 PF04002 RadC-like JAB domain Amuc_1232 PF01256 Carbohydrate kinase Amuc_1232 PF03853 YjeF-related protein N-terminus Amuc_1233 PF01176 Translation initiation factor 1A / IF-1 Amuc_1234 PF00572 Ribosomal protein L13 Amuc_1235 PF00380 Ribosomal protein S9/S16 Amuc_1236 PF02590 Predicted SPOUT methyltransferase Amuc_1237 PF08459 UvrC Helix-hairpin-helix N-terminal Amuc_1237 PF01541 GIY-YIG catalytic domain Amuc_1237 PF02151 UvrB/uvrC motif Amuc_1238 PF01618 MotA/TolQ/ExbB proton channel family Amuc_1239 PF02472 Biopolymer transport protein ExbD/TolR Amuc_1241 PF00912 Transglycosylase Amuc_1241 PF00905 Penicillin binding protein transpeptidase domain Amuc_1241 PF17092 Penicillin-binding protein OB-like domain Amuc_1242 PF00459 Inositol monophosphatase family Amuc_1243 PF02542 YgbB family Amuc_1245 PF01238 Phosphomannose isomerase type I Amuc_1247 PF03553 Na+/H+ antiporter family Amuc_1248 PF01370 NAD dependent epimerase/dehydratase family Amuc_1249 PF16363 GDP-mannose 4,6 dehydratase Amuc_1250 PF00117 Glutamine amidotransferase class-I Amuc_1250 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Amuc_1251 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Amuc_1251 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Amuc_1251 PF02142 MGS-like domain Amuc_1252 PF00120 Glutamine synthetase, catalytic domain Amuc_1252 PF18318 Glutamine synthetase C-terminal domain Amuc_1252 PF12437 Glutamine synthetase type III N terminal Amuc_1253 PF01493 GXGXG motif Amuc_1253 PF04898 Glutamate synthase central domain Amuc_1253 PF00310 Glutamine amidotransferases class-II Amuc_1253 PF01645 Conserved region in glutamate synthase Amuc_1254 PF02096 60Kd inner membrane protein Amuc_1254 PF14849 YidC periplasmic domain Amuc_1255 PF01809 Putative membrane protein insertion efficiency factor Amuc_1256 PF00825 Ribonuclease P Amuc_1257 PF00468 Ribosomal protein L34 Amuc_1258 PF00120 Glutamine synthetase, catalytic domain Amuc_1258 PF18318 Glutamine synthetase C-terminal domain Amuc_1258 PF12437 Glutamine synthetase type III N terminal Amuc_1259 PF13472 GDSL-like Lipase/Acylhydrolase family Amuc_1259 PF07859 alpha/beta hydrolase fold Amuc_1261 PF01263 Aldose 1-epimerase Amuc_1263 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Amuc_1263 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Amuc_1264 PF00348 Polyprenyl synthetase Amuc_1265 PF01118 Semialdehyde dehydrogenase, NAD binding domain Amuc_1265 PF02774 Semialdehyde dehydrogenase, dimerisation domain Amuc_1268 PF03315 Serine dehydratase beta chain Amuc_1268 PF03313 Serine dehydratase alpha chain Amuc_1269 PF00085 Thioredoxin Amuc_1269 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amuc_1278 PF00999 Sodium/hydrogen exchanger family Amuc_1278 PF02254 TrkA-N domain Amuc_1279 PF00149 Calcineurin-like phosphoesterase Amuc_1280 PF02073 Thermophilic metalloprotease (M29) Amuc_1281 PF00551 Formyl transferase Amuc_1282 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Amuc_1282 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Amuc_1285 PF01751 Toprim domain Amuc_1285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_1285 PF00986 DNA gyrase B subunit, carboxyl terminus Amuc_1285 PF00204 DNA gyrase B Amuc_1286 PF03989 DNA gyrase C-terminal domain, beta-propeller Amuc_1286 PF00521 DNA gyrase/topoisomerase IV, subunit A Amuc_1288 PF01136 Peptidase family U32 Amuc_1290 PF03781 Sulfatase-modifying factor enzyme 1 Amuc_1294 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Amuc_1294 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Amuc_1295 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_1296 PF00005 ABC transporter Amuc_1298 PF00009 Elongation factor Tu GTP binding domain Amuc_1299 PF01507 Phosphoadenosine phosphosulfate reductase family Amuc_1300 PF01507 Phosphoadenosine phosphosulfate reductase family Amuc_1301 PF00291 Pyridoxal-phosphate dependent enzyme Amuc_1302 PF01895 PhoU domain Amuc_1303 PF00005 ABC transporter Amuc_1304 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_1305 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_1306 PF12849 PBP superfamily domain Amuc_1307 PF00005 ABC transporter Amuc_1309 PF01263 Aldose 1-epimerase Amuc_1312 PF00675 Insulinase (Peptidase family M16) Amuc_1312 PF05193 Peptidase M16 inactive domain Amuc_1318 PF01765 Ribosome recycling factor Amuc_1319 PF00696 Amino acid kinase family Amuc_1320 PF05552 Conserved TM helix Amuc_1320 PF00924 Mechanosensitive ion channel Amuc_1321 PF00578 AhpC/TSA family Amuc_1321 PF10417 C-terminal domain of 1-Cys peroxiredoxin Amuc_1322 PF00209 Sodium:neurotransmitter symporter family Amuc_1327 PF02801 Beta-ketoacyl synthase, C-terminal domain Amuc_1327 PF00109 Beta-ketoacyl synthase, N-terminal domain Amuc_1329 PF01641 SelR domain Amuc_1330 PF11799 impB/mucB/samB family C-terminal domain Amuc_1330 PF00817 impB/mucB/samB family Amuc_1377 PF00772 DnaB-like helicase N terminal domain Amuc_1377 PF03796 DnaB-like helicase C terminal domain Amuc_1381 PF00005 ABC transporter Amuc_1382 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amuc_1383 PF02272 DHHA1 domain Amuc_1383 PF01411 tRNA synthetases class II (A) Amuc_1383 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amuc_1384 PF01066 CDP-alcohol phosphatidyltransferase Amuc_1386 PF00809 Pterin binding enzyme Amuc_1388 PF04551 GcpE protein Amuc_1392 PF00109 Beta-ketoacyl synthase, N-terminal domain Amuc_1392 PF02801 Beta-ketoacyl synthase, C-terminal domain Amuc_1393 PF00155 Aminotransferase class I and II Amuc_1396 PF01336 OB-fold nucleic acid binding domain Amuc_1396 PF00152 tRNA synthetases class II (D, K and N) Amuc_1396 PF02938 GAD domain Amuc_1397 PF03129 Anticodon binding domain Amuc_1397 PF13393 Histidyl-tRNA synthetase Amuc_1398 PF02492 CobW/HypB/UreG, nucleotide-binding domain Amuc_1399 PF00708 Acylphosphatase Amuc_1399 PF07503 HypF finger Amuc_1399 PF01300 Telomere recombination Amuc_1399 PF17788 HypF Kae1-like domain Amuc_1400 PF01455 HupF/HypC family Amuc_1401 PF01924 Hydrogenase formation hypA family Amuc_1402 PF00586 AIR synthase related protein, N-terminal domain Amuc_1402 PF02769 AIR synthase related protein, C-terminal domain Amuc_1405 PF13439 Glycosyltransferase Family 4 Amuc_1405 PF00534 Glycosyl transferases group 1 Amuc_1406 PF00012 Hsp70 protein Amuc_1407 PF00166 Chaperonin 10 Kd subunit Amuc_1408 PF00118 TCP-1/cpn60 chaperonin family Amuc_1413 PF13807 G-rich domain on putative tyrosine kinase Amuc_1413 PF02706 Chain length determinant protein Amuc_1413 PF13614 AAA domain Amuc_1416 PF01330 RuvA N terminal domain Amuc_1416 PF07499 RuvA, C-terminal domain Amuc_1417 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Amuc_1417 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Amuc_1418 PF00162 Phosphoglycerate kinase Amuc_1420 PF10566 Glycoside hydrolase 97 Amuc_1420 PF14508 Glycosyl-hydrolase 97 N-terminal Amuc_1420 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation Amuc_1421 PF00069 Protein kinase domain Amuc_1421 PF03793 PASTA domain Amuc_1424 PF07690 Major Facilitator Superfamily Amuc_1427 PF02811 PHP domain Amuc_1428 PF01515 Phosphate acetyl/butaryl transferase Amuc_1428 PF07085 DRTGG domain Amuc_1429 PF11734 TilS substrate C-terminal domain Amuc_1429 PF01171 PP-loop family Amuc_1430 PF01197 Ribosomal protein L31 Amuc_1435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amuc_1435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Amuc_1435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Amuc_1436 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Amuc_1436 PF00056 lactate/malate dehydrogenase, NAD binding domain Amuc_1440 PF00881 Nitroreductase family Amuc_1441 PF00849 RNA pseudouridylate synthase Amuc_1442 PF00849 RNA pseudouridylate synthase Amuc_1442 PF01479 S4 domain Amuc_1445 PF00005 ABC transporter Amuc_1446 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_1447 PF02774 Semialdehyde dehydrogenase, dimerisation domain Amuc_1447 PF01118 Semialdehyde dehydrogenase, NAD binding domain Amuc_1448 PF01960 ArgJ family Amuc_1452 PF17760 UvrA interaction domain Amuc_1452 PF17755 UvrA DNA-binding domain Amuc_1452 PF00005 ABC transporter Amuc_1457 PF00977 Histidine biosynthesis protein Amuc_1458 PF02594 Uncharacterised ACR, YggU family COG1872 Amuc_1460 PF00226 DnaJ domain Amuc_1460 PF01556 DnaJ C terminal domain Amuc_1460 PF00684 DnaJ central domain Amuc_1461 PF04452 RNA methyltransferase Amuc_1463 PF13229 Right handed beta helix region Amuc_1465 PF10502 Signal peptidase, peptidase S26 Amuc_1466 PF01565 FAD binding domain Amuc_1466 PF02913 FAD linked oxidases, C-terminal domain Amuc_1471 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Amuc_1471 PF14572 Phosphoribosyl synthetase-associated domain Amuc_1472 PF14693 Ribosomal protein TL5, C-terminal domain Amuc_1472 PF01386 Ribosomal L25p family Amuc_1474 PF00475 Imidazoleglycerol-phosphate dehydratase Amuc_1475 PF00117 Glutamine amidotransferase class-I Amuc_1476 PF01250 Ribosomal protein S6 Amuc_1477 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Amuc_1480 PF07943 Penicillin-binding protein 5, C-terminal domain Amuc_1480 PF00768 D-alanyl-D-alanine carboxypeptidase Amuc_1481 PF00365 Phosphofructokinase Amuc_1483 PF02535 ZIP Zinc transporter Amuc_1487 PF00155 Aminotransferase class I and II Amuc_1488 PF03755 YicC-like family, N-terminal region Amuc_1488 PF08340 Domain of unknown function (DUF1732) Amuc_1489 PF00625 Guanylate kinase Amuc_1490 PF03600 Citrate transporter Amuc_1490 PF02080 TrkA-C domain Amuc_1491 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amuc_1494 PF01040 UbiA prenyltransferase family Amuc_1500 PF01522 Polysaccharide deacetylase Amuc_1500 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain Amuc_1501 PF07549 SecD/SecF GG Motif Amuc_1501 PF02355 Protein export membrane protein Amuc_1503 PF01478 Type IV leader peptidase family Amuc_1503 PF06750 Bacterial Peptidase A24 N-terminal domain Amuc_1505 PF01000 RNA polymerase Rpb3/RpoA insert domain Amuc_1505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Amuc_1505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Amuc_1506 PF01196 Ribosomal protein L17 Amuc_1507 PF00698 Acyl transferase domain Amuc_1509 PF13419 Haloacid dehalogenase-like hydrolase Amuc_1512 PF00691 OmpA family Amuc_1519 PF00176 SNF2 family N-terminal domain Amuc_1519 PF00271 Helicase conserved C-terminal domain Amuc_1521 PF01555 DNA methylase Amuc_1521 PF18273 Type III R-M EcoP15I C-terminal domain Amuc_1522 PF04851 Type III restriction enzyme, res subunit Amuc_1522 PF08774 VRR-NUC domain Amuc_1527 PF00248 Aldo/keto reductase family Amuc_1528 PF03030 Inorganic H+ pyrophosphatase Amuc_1531 PF04715 Anthranilate synthase component I, N terminal region Amuc_1531 PF00425 chorismate binding enzyme Amuc_1532 PF00591 Glycosyl transferase family, a/b domain Amuc_1532 PF02885 Glycosyl transferase family, helical bundle domain Amuc_1533 PF00218 Indole-3-glycerol phosphate synthase Amuc_1534 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Amuc_1535 PF00291 Pyridoxal-phosphate dependent enzyme Amuc_1536 PF00290 Tryptophan synthase alpha chain Amuc_1539 PF00561 alpha/beta hydrolase fold Amuc_1540 PF00444 Ribosomal protein L36 Amuc_1542 PF04055 Radical SAM superfamily Amuc_1543 PF02901 Pyruvate formate lyase-like Amuc_1543 PF01228 Glycine radical Amuc_1551 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Amuc_1552 PF07690 Major Facilitator Superfamily Amuc_1555 PF00271 Helicase conserved C-terminal domain Amuc_1555 PF17757 UvrB interaction domain Amuc_1555 PF12344 Ultra-violet resistance protein B Amuc_1555 PF04851 Type III restriction enzyme, res subunit Amuc_1555 PF02151 UvrB/uvrC motif Amuc_1556 PF01632 Ribosomal protein L35 Amuc_1557 PF00453 Ribosomal protein L20 Amuc_1558 PF17820 PDZ domain Amuc_1558 PF02163 Peptidase family M50 Amuc_1561 PF12705 PD-(D/E)XK nuclease superfamily Amuc_1561 PF13361 UvrD-like helicase C-terminal domain Amuc_1561 PF00580 UvrD/REP helicase N-terminal domain Amuc_1563 PF00892 EamA-like transporter family Amuc_1564 PF06044 Dam-replacing family Amuc_1564 PF17726 Dam-replacing HTH domain Amuc_1565 PF00207 Alpha-2-macroglobulin family Amuc_1565 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Amuc_1565 PF07703 Alpha-2-macroglobulin bait region domain Amuc_1565 PF07678 A-macroglobulin TED domain Amuc_1565 PF01835 MG2 domain Amuc_1566 PF00465 Iron-containing alcohol dehydrogenase Amuc_1567 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Amuc_1567 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Amuc_1572 PF00285 Citrate synthase, C-terminal domain Amuc_1574 PF00588 SpoU rRNA Methylase family Amuc_1576 PF01668 SmpB protein Amuc_1578 PF00849 RNA pseudouridylate synthase Amuc_1580 PF00334 Nucleoside diphosphate kinase Amuc_1581 PF00535 Glycosyl transferase family 2 Amuc_1582 PF00535 Glycosyl transferase family 2 Amuc_1584 PF00482 Type II secretion system (T2SS), protein F Amuc_1585 PF00437 Type II/IV secretion system protein Amuc_1586 PF00437 Type II/IV secretion system protein Amuc_1587 PF01207 Dihydrouridine synthase (Dus) Amuc_1589 PF00155 Aminotransferase class I and II Amuc_1590 PF03023 Lipid II flippase MurJ Amuc_1591 PF01467 Cytidylyltransferase-like Amuc_1591 PF00294 pfkB family carbohydrate kinase Amuc_1592 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Amuc_1592 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Amuc_1593 PF02638 Glycosyl hydrolase-like 10 Amuc_1594 PF00731 AIR carboxylase Amuc_1595 PF09179 TilS substrate binding domain Amuc_1595 PF11734 TilS substrate C-terminal domain Amuc_1595 PF01171 PP-loop family Amuc_1596 PF01969 Protein of unknown function DUF111 Amuc_1597 PF00348 Polyprenyl synthetase Amuc_1598 PF00854 POT family Amuc_1600 PF01883 Iron-sulfur cluster assembly protein Amuc_1604 PF00361 Proton-conducting membrane transporter Amuc_1605 PF00361 Proton-conducting membrane transporter Amuc_1606 PF00361 Proton-conducting membrane transporter Amuc_1606 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Amuc_1607 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Amuc_1608 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Amuc_1610 PF00146 NADH dehydrogenase Amuc_1611 PF01568 Molydopterin dinucleotide binding domain Amuc_1611 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Amuc_1611 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amuc_1611 PF00384 Molybdopterin oxidoreductase Amuc_1612 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amuc_1612 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amuc_1612 PF10531 SLBB domain Amuc_1614 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Amuc_1616 PF01522 Polysaccharide deacetylase Amuc_1618 PF00677 Lumazine binding domain Amuc_1620 PF03797 Autotransporter beta-domain Amuc_1620 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat Amuc_1620 PF07548 Chlamydia polymorphic membrane protein middle domain Amuc_1621 PF02446 4-alpha-glucanotransferase Amuc_1623 PF04055 Radical SAM superfamily Amuc_1623 PF18693 TRAM domain Amuc_1623 PF00919 Uncharacterized protein family UPF0004 Amuc_1624 PF01972 Serine dehydrogenase proteinase Amuc_1624 PF01957 NfeD-like C-terminal, partner-binding Amuc_1625 PF01807 CHC2 zinc finger Amuc_1625 PF10410 DnaB-helicase binding domain of primase Amuc_1625 PF08275 DNA primase catalytic core, N-terminal domain Amuc_1626 PF04539 Sigma-70 region 3 Amuc_1626 PF00140 Sigma-70 factor, region 1.2 Amuc_1626 PF04542 Sigma-70 region 2 Amuc_1626 PF04545 Sigma-70, region 4 Amuc_1626 PF03979 Sigma-70 factor, region 1.1 Amuc_1627 PF01427 D-ala-D-ala dipeptidase Amuc_1630 PF00464 Serine hydroxymethyltransferase Amuc_1631 PF00595 PDZ domain Amuc_1631 PF11818 C-terminal domain of tail specific protease (DUF3340) Amuc_1631 PF03572 Peptidase family S41 Amuc_1631 PF17804 Tail specific protease N-terminal domain Amuc_1633 PF00271 Helicase conserved C-terminal domain Amuc_1633 PF00270 DEAD/DEAH box helicase Amuc_1633 PF04408 Helicase associated domain (HA2) Amuc_1633 PF08482 ATP-dependent helicase C-terminal Amuc_1636 PF01743 Poly A polymerase head domain Amuc_1636 PF12627 Probable RNA and SrmB- binding site of polymerase A Amuc_1636 PF13735 tRNA nucleotidyltransferase domain 2 putative Amuc_1638 PF03958 Bacterial type II/III secretion system short domain Amuc_1638 PF00263 Bacterial type II and III secretion system protein Amuc_1641 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Amuc_1641 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Amuc_1645 PF01207 Dihydrouridine synthase (Dus) Amuc_1646 PF02401 LytB protein Amuc_1648 PF01649 Ribosomal protein S20 Amuc_1649 PF13419 Haloacid dehalogenase-like hydrolase Amuc_1650 PF00205 Thiamine pyrophosphate enzyme, central domain Amuc_1650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amuc_1650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Amuc_1652 PF02666 Phosphatidylserine decarboxylase Amuc_1653 PF00834 Ribulose-phosphate 3 epimerase family Amuc_1654 PF08264 Anticodon-binding domain of tRNA Amuc_1654 PF00133 tRNA synthetases class I (I, L, M and V) Amuc_1654 PF13603 Leucyl-tRNA synthetase, Domain 2 Amuc_1654 PF09334 tRNA synthetases class I (M) Amuc_1655 PF00884 Sulfatase Amuc_1657 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Amuc_1658 PF17944 Arginine decarboxylase C-terminal helical extension Amuc_1658 PF17810 Arginine decarboxylase helical bundle domain Amuc_1658 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amuc_1666 PF02929 Beta galactosidase small chain Amuc_1666 PF00703 Glycosyl hydrolases family 2 Amuc_1666 PF16353 Domain of unknown function(DUF4981) Amuc_1666 PF02837 Glycosyl hydrolases family 2, sugar binding domain Amuc_1666 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Amuc_1667 PF02837 Glycosyl hydrolases family 2, sugar binding domain Amuc_1667 PF00703 Glycosyl hydrolases family 2 Amuc_1667 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Amuc_1668 PF00004 ATPase family associated with various cellular activities (AAA) Amuc_1668 PF12002 MgsA AAA+ ATPase C terminal Amuc_1668 PF16193 AAA C-terminal domain Amuc_1669 PF07691 PA14 domain Amuc_1669 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_1669 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_1671 PF00365 Phosphofructokinase Amuc_1676 PF07669 Eco57I restriction-modification methylase Amuc_1678 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Amuc_1680 PF02654 Cobalamin-5-phosphate synthase Amuc_1681 PF02277 Phosphoribosyltransferase Amuc_1682 PF03186 CobD/Cbib protein Amuc_1683 PF07685 CobB/CobQ-like glutamine amidotransferase domain Amuc_1683 PF00155 Aminotransferase class I and II Amuc_1683 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amuc_1684 PF07715 TonB-dependent Receptor Plug Domain Amuc_1684 PF00593 TonB dependent receptor Amuc_1686 PF01301 Glycosyl hydrolases family 35 Amuc_1688 PF01979 Amidohydrolase family Amuc_1689 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amuc_1689 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amuc_1692 PF02817 e3 binding domain Amuc_1692 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Amuc_1692 PF00364 Biotin-requiring enzyme Amuc_1693 PF00676 Dehydrogenase E1 component Amuc_1693 PF16870 2-oxoglutarate dehydrogenase C-terminal Amuc_1693 PF16078 2-oxoglutarate dehydrogenase N-terminus Amuc_1693 PF02779 Transketolase, pyrimidine binding domain Amuc_1694 PF02322 Cytochrome bd terminal oxidase subunit II Amuc_1695 PF01654 Cytochrome bd terminal oxidase subunit I Amuc_1697 PF01451 Low molecular weight phosphotyrosine protein phosphatase Amuc_1700 PF00291 Pyridoxal-phosphate dependent enzyme Amuc_1701 PF01047 MarR family Amuc_1703 PF00210 Ferritin-like domain Amuc_1706 PF02698 DUF218 domain Amuc_1710 PF16124 RecQ zinc-binding Amuc_1710 PF00570 HRDC domain Amuc_1710 PF00271 Helicase conserved C-terminal domain Amuc_1710 PF00270 DEAD/DEAH box helicase Amuc_1710 PF09382 RQC domain Amuc_1712 PF02629 CoA binding domain Amuc_1712 PF00549 CoA-ligase Amuc_1713 PF08442 ATP-grasp domain Amuc_1713 PF00549 CoA-ligase Amuc_1719 PF02601 Exonuclease VII, large subunit Amuc_1719 PF13742 OB-fold nucleic acid binding domain Amuc_1720 PF01553 Acyltransferase Amuc_1720 PF00501 AMP-binding enzyme Amuc_1726 PF01370 NAD dependent epimerase/dehydratase family Amuc_1727 PF00672 HAMP domain Amuc_1727 PF00512 His Kinase A (phospho-acceptor) domain Amuc_1727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_1728 PF00072 Response regulator receiver domain Amuc_1728 PF00486 Transcriptional regulatory protein, C terminal Amuc_1730 PF00490 Delta-aminolevulinic acid dehydratase Amuc_1732 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amuc_1732 PF03129 Anticodon binding domain Amuc_1732 PF02824 TGS domain Amuc_1732 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amuc_1733 PF05198 Translation initiation factor IF-3, N-terminal domain Amuc_1733 PF00707 Translation initiation factor IF-3, C-terminal domain Amuc_1736 PF04235 Protein of unknown function (DUF418) Amuc_1736 PF07786 Protein of unknown function (DUF1624) Amuc_1737 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Amuc_1737 PF13288 DXP reductoisomerase C-terminal domain Amuc_1737 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Amuc_1738 PF01467 Cytidylyltransferase-like Amuc_1741 PF01704 UTP--glucose-1-phosphate uridylyltransferase Amuc_1742 PF13649 Methyltransferase domain Amuc_1746 PF04991 LicD family Amuc_1747 PF01467 Cytidylyltransferase-like Amuc_1749 PF00155 Aminotransferase class I and II Amuc_1750 PF04991 LicD family Amuc_1751 PF00128 Alpha amylase, catalytic domain Amuc_1751 PF02806 Alpha amylase, C-terminal all-beta domain Amuc_1751 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Amuc_1753 PF02657 Fe-S metabolism associated domain Amuc_1754 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amuc_1754 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amuc_1755 PF00884 Sulfatase Amuc_1756 PF02896 PEP-utilising enzyme, TIM barrel domain Amuc_1756 PF05524 PEP-utilising enzyme, N-terminal Amuc_1756 PF00391 PEP-utilising enzyme, mobile domain Amuc_1757 PF00381 PTS HPr component phosphorylation site Amuc_1758 PF07475 HPr Serine kinase C-terminal domain Amuc_1758 PF02603 HPr Serine kinase N terminus Amuc_1759 PF01546 Peptidase family M20/M25/M40 Amuc_1759 PF07687 Peptidase dimerisation domain Amuc_1760 PF00005 ABC transporter Amuc_1763 PF01168 Alanine racemase, N-terminal domain Amuc_1766 PF00535 Glycosyl transferase family 2 Amuc_1768 PF04379 ApaG domain Amuc_1769 PF00176 SNF2 family N-terminal domain Amuc_1769 PF04434 SWIM zinc finger Amuc_1769 PF00271 Helicase conserved C-terminal domain Amuc_1770 PF01037 Lrp/AsnC ligand binding domain Amuc_1771 PF00155 Aminotransferase class I and II Amuc_1774 PF03129 Anticodon binding domain Amuc_1774 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amuc_1775 PF00248 Aldo/keto reductase family Amuc_1778 PF13519 von Willebrand factor type A domain Amuc_1781 PF07726 ATPase family associated with various cellular activities (AAA) Amuc_1781 PF17863 AAA lid domain Amuc_1782 PF01425 Amidase Amuc_1783 PF02686 Glu-tRNAGln amidotransferase C subunit Amuc_1790 PF13180 PDZ domain Amuc_1791 PF13180 PDZ domain Amuc_1793 PF01757 Acyltransferase family Amuc_1798 PF00155 Aminotransferase class I and II Amuc_1800 PF00248 Aldo/keto reductase family Amuc_1801 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Amuc_1802 PF00248 Aldo/keto reductase family Amuc_1803 PF00149 Calcineurin-like phosphoesterase Amuc_1807 PF00248 Aldo/keto reductase family Amuc_1809 PF02525 Flavodoxin-like fold Amuc_1810 PF13411 MerR HTH family regulatory protein Amuc_1812 PF00128 Alpha amylase, catalytic domain Amuc_1812 PF09154 Domain of unknown function (DUF1939) Amuc_1813 PF01554 MatE Amuc_1815 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_1815 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_1817 PF04321 RmlD substrate binding domain Amuc_1818 PF17785 PUA-like domain Amuc_1818 PF10672 S-adenosylmethionine-dependent methyltransferase Amuc_1821 PF17785 PUA-like domain Amuc_1821 PF10672 S-adenosylmethionine-dependent methyltransferase Amuc_1822 PF02585 GlcNAc-PI de-N-acetylase Amuc_1822 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Amuc_1825 PF01728 FtsJ-like methyltransferase Amuc_1825 PF01479 S4 domain Amuc_1827 PF02678 Pirin Amuc_1827 PF17954 Quercetinase C-terminal cupin domain Amuc_1830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Amuc_1830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Amuc_1832 PF07881 L-fucose isomerase, first N-terminal domain Amuc_1832 PF02952 L-fucose isomerase, C-terminal domain Amuc_1832 PF07882 L-fucose isomerase, second N-terminal domain Amuc_1833 PF07690 Major Facilitator Superfamily Amuc_1835 PF13859 BNR repeat-like domain Amuc_1835 PF14873 N-terminal domain of BNR-repeat neuraminidase Amuc_1836 PF08281 Sigma-70, region 4 Amuc_1836 PF04542 Sigma-70 region 2 Amuc_1838 PF02583 Metal-sensitive transcriptional repressor Amuc_1839 PF00403 Heavy-metal-associated domain Amuc_1840 PF13667 ThiC-associated domain Amuc_1840 PF01964 Radical SAM ThiC family Amuc_1844 PF17820 PDZ domain Amuc_1844 PF13180 PDZ domain Amuc_1847 PF01966 HD domain Amuc_1847 PF13286 Phosphohydrolase-associated domain Amuc_1849 PF00892 EamA-like transporter family Amuc_1850 PF00842 Alanine racemase, C-terminal domain Amuc_1850 PF01168 Alanine racemase, N-terminal domain Amuc_1851 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amuc_1851 PF00005 ABC transporter Amuc_1852 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amuc_1852 PF00005 ABC transporter Amuc_1853 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amuc_1854 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_1854 PF12911 N-terminal TM domain of oligopeptide transport permease C Amuc_1855 PF00528 Binding-protein-dependent transport system inner membrane component Amuc_1859 PF08546 Ketopantoate reductase PanE/ApbA C terminal Amuc_1859 PF02558 Ketopantoate reductase PanE/ApbA Amuc_1860 PF01268 Formate--tetrahydrofolate ligase Amuc_1861 PF06940 Domain of unknown function (DUF1287) Amuc_1862 PF02843 Phosphoribosylglycinamide synthetase, C domain Amuc_1862 PF02844 Phosphoribosylglycinamide synthetase, N domain Amuc_1862 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Amuc_1863 PF00436 Single-strand binding protein family Amuc_1865 PF01618 MotA/TolQ/ExbB proton channel family Amuc_1867 PF01327 Polypeptide deformylase Amuc_1869 PF13439 Glycosyltransferase Family 4 Amuc_1869 PF00534 Glycosyl transferases group 1 Amuc_1870 PF17137 Domain of unknown function (DUF5110) Amuc_1870 PF01055 Glycosyl hydrolases family 31 Amuc_1870 PF13802 Galactose mutarotase-like Amuc_1870 PF16338 Domain of unknown function (DUF4968) Amuc_1874 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Amuc_1874 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Amuc_1876 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Amuc_1879 PF01757 Acyltransferase family Amuc_1880 PF00180 Isocitrate/isopropylmalate dehydrogenase Amuc_1883 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Amuc_1883 PF00753 Metallo-beta-lactamase superfamily Amuc_1883 PF10996 Beta-Casp domain Amuc_1884 PF02223 Thymidylate kinase Amuc_1885 PF06508 Queuosine biosynthesis protein QueC Amuc_1886 PF14489 QueF-like protein Amuc_1887 PF00924 Mechanosensitive ion channel Amuc_1888 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amuc_1889 PF00902 Sec-independent protein translocase protein (TatC) Amuc_1890 PF02673 Bacitracin resistance protein BacA Amuc_1894 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amuc_1895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amuc_1896 PF00216 Bacterial DNA-binding protein Amuc_1897 PF01264 Chorismate synthase Amuc_1899 PF00667 FAD binding domain Amuc_1899 PF00175 Oxidoreductase NAD-binding domain Amuc_1899 PF00258 Flavodoxin Amuc_1901 PF00149 Calcineurin-like phosphoesterase Amuc_1905 PF02086 D12 class N6 adenine-specific DNA methyltransferase Amuc_1906 PF02899 Phage integrase, N-terminal SAM-like domain Amuc_1906 PF00589 Phage integrase family Amuc_1911 PF00465 Iron-containing alcohol dehydrogenase Amuc_1913 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Amuc_1913 PF12008 Type I restriction and modification enzyme - subunit R C terminal Amuc_1913 PF18766 SWI2/SNF2 ATPase Amuc_1915 PF02384 N-6 DNA Methylase Amuc_1915 PF12161 HsdM N-terminal domain Amuc_1916 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Amuc_1918 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Amuc_1918 PF07977 FabA-like domain Amuc_1919 PF00483 Nucleotidyl transferase Amuc_1921 PF00795 Carbon-nitrogen hydrolase Amuc_1924 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_1924 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain Amuc_1924 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_1924 PF03173 Putative carbohydrate binding domain Amuc_1926 PF01578 Cytochrome C assembly protein Amuc_1928 PF01497 Periplasmic binding protein Amuc_1929 PF00005 ABC transporter Amuc_1930 PF01032 FecCD transport family Amuc_1931 PF01032 FecCD transport family Amuc_1938 PF01367 5'-3' exonuclease, C-terminal SAM fold Amuc_1938 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Amuc_1938 PF00476 DNA polymerase family A Amuc_1938 PF01612 3'-5' exonuclease Amuc_1941 PF00206 Lyase Amuc_1941 PF10397 Adenylosuccinate lyase C-terminus Amuc_1942 PF07687 Peptidase dimerisation domain Amuc_1942 PF01546 Peptidase family M20/M25/M40 Amuc_1946 PF00701 Dihydrodipicolinate synthetase family Amuc_1949 PF00425 chorismate binding enzyme Amuc_1950 PF00117 Glutamine amidotransferase class-I Amuc_1951 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amuc_1951 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Amuc_1954 PF02540 NAD synthase Amuc_1954 PF00117 Glutamine amidotransferase class-I Amuc_1954 PF00958 GMP synthase C terminal domain Amuc_1956 PF04073 Aminoacyl-tRNA editing domain Amuc_1961 PF02310 B12 binding domain Amuc_1961 PF02607 B12 binding domain Amuc_1961 PF02574 Homocysteine S-methyltransferase Amuc_1961 PF02965 Vitamin B12 dependent methionine synthase, activation domain Amuc_1961 PF00809 Pterin binding enzyme Amuc_1962 PF06738 Putative threonine/serine exporter Amuc_1963 PF12821 Threonine/Serine exporter, ThrE Amuc_1963 PF06738 Putative threonine/serine exporter Amuc_1964 PF03447 Homoserine dehydrogenase, NAD binding domain Amuc_1964 PF00742 Homoserine dehydrogenase Amuc_1964 PF01842 ACT domain Amuc_1965 PF00696 Amino acid kinase family Amuc_1965 PF01842 ACT domain Amuc_1965 PF13840 ACT domain Amuc_1968 PF09529 Integral membrane protein (intg_mem_TP0381) Amuc_1970 PF08471 Class II vitamin B12-dependent ribonucleotide reductase Amuc_1970 PF02867 Ribonucleotide reductase, barrel domain Amuc_1971 PF08501 Shikimate dehydrogenase substrate binding domain Amuc_1971 PF01488 Shikimate / quinate 5-dehydrogenase Amuc_1971 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Amuc_1972 PF00730 HhH-GPD superfamily base excision DNA repair protein Amuc_1972 PF14815 NUDIX domain Amuc_1973 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Amuc_1974 PF00391 PEP-utilising enzyme, mobile domain Amuc_1974 PF02896 PEP-utilising enzyme, TIM barrel domain Amuc_1974 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amuc_1975 PF00342 Phosphoglucose isomerase Amuc_1977 PF10672 S-adenosylmethionine-dependent methyltransferase Amuc_1977 PF17785 PUA-like domain Amuc_1983 PF02310 B12 binding domain Amuc_1983 PF01642 Methylmalonyl-CoA mutase Amuc_1984 PF01642 Methylmalonyl-CoA mutase Amuc_1990 PF14748 Pyrroline-5-carboxylate reductase dimerisation Amuc_1990 PF03807 NADP oxidoreductase coenzyme F420-dependent Amuc_1991 PF03352 Methyladenine glycosylase Amuc_1995 PF01212 Beta-eliminating lyase Amuc_1998 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Amuc_1998 PF01588 Putative tRNA binding domain Amuc_1998 PF03147 Ferredoxin-fold anticodon binding domain Amuc_1998 PF03483 B3/4 domain Amuc_1998 PF03484 tRNA synthetase B5 domain Amuc_1999 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Amuc_1999 PF01409 tRNA synthetases class II core domain (F) Amuc_2002 PF00183 Hsp90 protein Amuc_2002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amuc_2003 PF07885 Ion channel Amuc_2008 PF09827 CRISPR associated protein Cas2 Amuc_2011 PF01168 Alanine racemase, N-terminal domain Amuc_2011 PF00842 Alanine racemase, C-terminal domain Amuc_2012 PF02082 Transcriptional regulator Amuc_2013 PF01053 Cys/Met metabolism PLP-dependent enzyme Amuc_2014 PF00291 Pyridoxal-phosphate dependent enzyme Amuc_2015 PF02581 Thiamine monophosphate synthase Amuc_2016 PF02110 Hydroxyethylthiazole kinase family Amuc_2018 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_2018 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_2019 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_2019 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_2021 PF00293 NUDIX domain Amuc_2024 PF02075 Crossover junction endodeoxyribonuclease RuvC Amuc_2025 PF00270 DEAD/DEAH box helicase Amuc_2025 PF00271 Helicase conserved C-terminal domain Amuc_2026 PF00753 Metallo-beta-lactamase superfamily Amuc_2027 PF04909 Amidohydrolase Amuc_2029 PF13533 Biotin-lipoyl like Amuc_2030 PF00873 AcrB/AcrD/AcrF family Amuc_2031 PF00186 Dihydrofolate reductase Amuc_2032 PF00303 Thymidylate synthase Amuc_2033 PF13091 PLD-like domain Amuc_2033 PF13396 Phospholipase_D-nuclease N-terminal Amuc_2034 PF00364 Biotin-requiring enzyme Amuc_2034 PF02436 Conserved carboxylase domain Amuc_2034 PF00682 HMGL-like Amuc_2036 PF01554 MatE Amuc_2037 PF01883 Iron-sulfur cluster assembly protein Amuc_2037 PF10609 NUBPL iron-transfer P-loop NTPase Amuc_2039 PF00682 HMGL-like Amuc_2039 PF08502 LeuA allosteric (dimerisation) domain Amuc_2040 PF01432 Peptidase family M3 Amuc_2041 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amuc_2042 PF00873 AcrB/AcrD/AcrF family Amuc_2043 PF02321 Outer membrane efflux protein Amuc_2049 PF00654 Voltage gated chloride channel Amuc_2051 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Amuc_2051 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Amuc_2052 PF02684 Lipid-A-disaccharide synthetase Amuc_2053 PF09335 SNARE associated Golgi protein Amuc_2066 PF00171 Aldehyde dehydrogenase family Amuc_2070 PF18011 C-terminal domain found in long catalases Amuc_2070 PF06628 Catalase-related immune-responsive Amuc_2070 PF00199 Catalase Amuc_2071 PF01578 Cytochrome C assembly protein Amuc_2072 PF02915 Rubrerythrin Amuc_2074 PF13302 Acetyltransferase (GNAT) domain Amuc_2076 PF01580 FtsK/SpoIIIE family Amuc_2076 PF09397 Ftsk gamma domain Amuc_2076 PF17854 FtsK alpha domain Amuc_2077 PF02563 Polysaccharide biosynthesis/export protein Amuc_2077 PF10531 SLBB domain Amuc_2078 PF13614 AAA domain Amuc_2080 PF02397 Bacterial sugar transferase Amuc_2081 PF00535 Glycosyl transferase family 2 Amuc_2082 PF00534 Glycosyl transferases group 1 Amuc_2082 PF13439 Glycosyltransferase Family 4 Amuc_2083 PF13439 Glycosyltransferase Family 4 Amuc_2084 PF13439 Glycosyltransferase Family 4 Amuc_2088 PF13439 Glycosyltransferase Family 4 Amuc_2088 PF00534 Glycosyl transferases group 1 Amuc_2090 PF00534 Glycosyl transferases group 1 Amuc_2090 PF13439 Glycosyltransferase Family 4 Amuc_2092 PF00132 Bacterial transferase hexapeptide (six repeats) Amuc_2094 PF00535 Glycosyl transferase family 2 Amuc_2098 PF01757 Acyltransferase family Amuc_2100 PF01636 Phosphotransferase enzyme family Amuc_2101 PF05025 RbsD / FucU transport protein family Amuc_2102 PF00155 Aminotransferase class I and II Amuc_2103 PF08264 Anticodon-binding domain of tRNA Amuc_2103 PF09334 tRNA synthetases class I (M) Amuc_2103 PF01588 Putative tRNA binding domain Amuc_2104 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Amuc_2106 PF03949 Malic enzyme, NAD binding domain Amuc_2106 PF00390 Malic enzyme, N-terminal domain Amuc_2106 PF01515 Phosphate acetyl/butaryl transferase Amuc_2108 PF00722 Glycosyl hydrolases family 16 Amuc_2109 PF00933 Glycosyl hydrolase family 3 N terminal domain Amuc_2113 PF04055 Radical SAM superfamily Amuc_2113 PF06969 HemN C-terminal domain Amuc_2115 PF02403 Seryl-tRNA synthetase N-terminal domain Amuc_2115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amuc_2116 PF00107 Zinc-binding dehydrogenase Amuc_2116 PF08240 Alcohol dehydrogenase GroES-like domain Amuc_2118 PF00795 Carbon-nitrogen hydrolase Amuc_2119 PF07726 ATPase family associated with various cellular activities (AAA) Amuc_2119 PF17863 AAA lid domain Amuc_2121 PF01195 Peptidyl-tRNA hydrolase Amuc_2122 PF00912 Transglycosylase Amuc_2122 PF00905 Penicillin binding protein transpeptidase domain Amuc_2125 PF00709 Adenylosuccinate synthetase Amuc_2128 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Amuc_2128 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Amuc_2129 PF00374 Nickel-dependent hydrogenase Amuc_2131 PF01750 Hydrogenase maturation protease Amuc_2132 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Amuc_2137 PF00881 Nitroreductase family Amuc_2138 PF00155 Aminotransferase class I and II Amuc_2142 PF02355 Protein export membrane protein Amuc_2142 PF07549 SecD/SecF GG Motif Amuc_2144 PF05681 Fumarate hydratase (Fumerase) Amuc_2144 PF05683 Fumarase C-terminus Amuc_2148 PF00728 Glycosyl hydrolase family 20, catalytic domain Amuc_2148 PF07691 PA14 domain Amuc_2148 PF02838 Glycosyl hydrolase family 20, domain 2 Amuc_2149 PF02978 Signal peptide binding domain Amuc_2149 PF02881 SRP54-type protein, helical bundle domain Amuc_2149 PF00448 SRP54-type protein, GTPase domain Amuc_2157 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Amuc_2158 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Amuc_2161 PF13193 AMP-binding enzyme C-terminal domain Amuc_2161 PF00501 AMP-binding enzyme Amuc_2167 PF01432 Peptidase family M3 Amuc_2169 PF03485 Arginyl tRNA synthetase N terminal domain Amuc_2169 PF05746 DALR anticodon binding domain Amuc_2169 PF00750 tRNA synthetases class I (R) Amuc_2176 PF17755 UvrA DNA-binding domain Amuc_2176 PF00005 ABC transporter Amuc_2176 PF17760 UvrA interaction domain Amuc_2177 PF07517 SecA DEAD-like domain Amuc_2177 PF01043 SecA preprotein cross-linking domain Amuc_2177 PF07516 SecA Wing and Scaffold domain Amuc_2177 PF02810 SEC-C motif Amuc_2178 PF00583 Acetyltransferase (GNAT) family Amuc_2178 PF00696 Amino acid kinase family