 C1I96_00015 NONE
 C1I96_00020 NONE
 C1I96_00025 NONE
 C1I96_00030 NONE
 C1I96_00035    9097 ..    9113 +  -3.5  -3.98816   ATGCAAGAAGAATCC              GCGGCGG AGA CCTCCCC              TTTAATCTTGATTTG  58 311
 C1I96_00040 NONE
 C1I96_00045   12047 ..   12064 +  -4.9  -2.78405   ATTTTCCCCACTCAT             TTTTCCT ATGG AGGAAGA              CCTTTTTTCCCTGGC  47 43
 C1I96_00050   14494 ..   14504 +  -2.4  -3.18768   GCACGCATCATGCGC                 CCGG CTG CCCG                 TATCTTCGTATTCCC  43 81
        pgsA   15724 ..   15736 +  -4.1  -4.32491   AGGAATGAGCCTTCT                TCGGA ATT TCTGA                TTGTTATTTTTCCAT  63 525
 C1I96_00065   18482 ..   18495 +  -4.5  -3.20722   GGAAGGAACGGCAGC               CGTGC GGAA GCATG                ATTTTAATCATTCAA  50 11
 C1I96_00070   19497 ..   19531 + -12.9  -5.21709   ATGATGCCCTTACAG    GCCCC-GTCCTTCCCGC GCT GCG-GCAGGACTGGGGC    TTTTTTCATGTCCGG 100 306
 C1I96_00080   21255 ..   21265 +  -6.8   -5.5112   AACAGGCCCAGCTTG                 CAGG CGG CCTG                 TTTTTTATTGCTCCA  93 123
 C1I96_00085 NONE
 C1I96_00090   23574 ..   23594 +  -5.3  -3.03661   TCCTGACGTTTCCCT            CTCTCCCCG TTA CCGGGACAG            CTTTCTCCTTCCGTG  51 35
 C1I96_00105   27364 ..   27374 +  -2.4    -3.737   TAACGTCCGGACTTT                 GGGG AGC CCGC                 TTTAATAAACGGTTA  50 254
 C1I96_00110   28383 ..   28410 + -14.2  -3.97511   GCCCAATGACACAAA        CGGCGGTTTTGA ACAA TCAAGGCCGCCG         TTCTTCTATTCCCTA 100 108
 C1I96_00115 NONE
 C1I96_00120 NONE
 C1I96_00125   33012 ..   33040 + -16.1   -5.0538   CACAACCTTCACGAA        GGCAGGACATTCC CAA GGAATTTCCTGCC        TTTTTTCCGATGGGA 100 72
 C1I96_00130   33415 ..   33449 +  -4.3  -4.19238   AGCCAGCTTCTTGCG    CGTTGGC-GT-CCGCAG GTG TTCCGGAACTGCCAGCG    TTTTCCCATTGCGCA  61 202
 C1I96_00165   40023 ..   40035 + -10.5  -3.65812   TCCGAGTTTCCTTCG                CGGGC CCT GCCCG                TTCTATTCAACAAAC  79 47
 C1I96_00170   41600 ..   41647 + -14.4  -5.04385   GACACCCCCTTTCAA CGGGATTGTTCCAAGACAGGC AAAACGG GCCT-TTTCGGAACAATCCCG TTTTTTACGCCTCTC 100 46
 C1I96_00175   42180 ..   42197 +    -2   -3.9712   TTCGTACCATCGGCA             TCAAGA TCACTC TCTTGG              TTTCTCCTGGACTGC  55 268
 C1I96_00180   42913 ..   42947 +  -2.9  -4.59853   TTTGTGGACCTATTT     TCGGGGGATAGATTA ACTGA TAATATATCAACCGA     TTTTTGGAGAATTAC  65 325
 C1I96_00220 NONE
 C1I96_00225   58087 ..   58103 +  -6.6  -4.86621   GGCATGATTTCAAGA              TACAGG TAGTC CCTGTA              TTTTTCCTTAACCAT  84 370
 C1I96_00240   60290 ..   60306 +  -4.3  -3.54146   TCAAATAATTCTTGC              CTTTCGG CTT CCGGTAG              TATTTACTTCGCCGC  52 60
 C1I96_00245   60430 ..   60451 +  -4.5  -4.28049   GCCAGCTTTACCGCC           GCGGCAGTTA CGA TAATT-CCGC           TTTTCCCCTTTTCAG  64 37
 C1I96_00250   61742 ..   61758 +  -2.3  -2.84051   ATGTCCTAACTTCCT              TTTTCCT TTC ATGAAAA              CTTTACTGGAAGTCC  40 32
        prmC NONE
        priA NONE
 C1I96_00265   65808 ..   65821 +  -6.7  -2.80493   GAAAAGGCGGACTCC               TTCCC ATCA GGGAA                ATTATCTGTTCAGCA  54 54
 C1I96_00275   67196 ..   67228 +  -3.5  -3.09516   GAGGACGGGTAATGT     CTGCCG-CACCA CAACACTAAA TGGTGTCGGTAG      TTCAATGGTAGAGCC  45 174
 C1I96_00280   67314 ..   67330 + -10.9  -5.21709   TTTCCTTCATAAAAA              GAGCACT TAT AGTGCTC              TTTTTTACTATCCCC 100 46
 C1I96_00285 NONE
 C1I96_00290 NONE
 C1I96_00295   69735 ..   69761 + -11.7  -5.10033   GCCTACCAAAATAAA         GCCTTACAAGT TAACC ACTTGTGAGGC         TTTTCTTTCTCTTCC 100 33
 C1I96_00300 NONE
 C1I96_00305 NONE
 C1I96_00310   78164 ..   78174 +  -6.8  -3.15861   AGCATTGTTCAAGAG                 CCAG GAA CTGG                 TTAATAAAGGTAGTC  54 357
 C1I96_00340 NONE
 C1I96_00345 NONE
 C1I96_00350 NONE
 C1I96_00355 NONE
 C1I96_00360 NONE
 C1I96_00365 NONE
 C1I96_00370   92553 ..   92580 + -21.4  -5.27335   AGGCTTTTCAACCAG        GGCCCCTGCATG ACAA CATGCAGGGGCC         TTTTTCTTTAACGGA 100 49
 C1I96_00375   95619 ..   95643 +  -6.3  -4.07568   ACCATGGCGGCGGGA          GCAGGGGCGCG TTC CGTATTCCTGC          TTTTCAGCCAGACGA  66 442
 C1I96_00390   98559 ..   98579 +  -8.9  -4.30014   TCCGCCCATCAGCCT            GCCAGCCTC TGC GGGGCTTGC            TTTTCCATTGCTCCC  80 78
 C1I96_00395   99576 ..   99607 + -10.1  -4.81249   TATTCCCCTTATCCG      GGCCGCTGGCG GCATTCCCCG CGCTGGCGGCC       TTTTTCAATTTACGG 100 59
 C1I96_00400 NONE
        ispD NONE
 C1I96_00410  101779 ..  101794 +  -2.5  -3.71645   GAAAAAAATCCAGCC              GACGG CCCCTC CTGTC               TTTGACTCTCCCCTT  50 144
        trpS NONE
 C1I96_00420 NONE
 C1I96_00425 NONE
 C1I96_00430 NONE
 C1I96_00435 NONE
 C1I96_00440 NONE
 C1I96_00445  106031 ..  106056 +  -9.1  -4.54727   GCACCAATTGATAAA         CCTCTTAATCC GAAA GAATTAAGAGG          TTTTCCTTTACCCGG  90 35
 C1I96_00450  108015 ..  108027 +  -2.7  -3.68366   GACAAATGCACCTTC                TATGA TTT TCATG                TTACTTTTAGGATAA  51 377
 C1I96_00475  115446 ..  115476 +  -4.8  -3.75193   CACGAAAAAATTCGG      GGAGGACATCCAT GAAAAG ATCG-TGTCCTCC       TTTCCATCTATGGTT  57 125
 C1I96_00485  116874 ..  116890 +    -3   -5.4492   TGATATCGCACTGCA              TATTCG CCATA CGGATA              TTTTTTATATCTATC  84 321
 C1I96_00495  117503 ..  117513 +    -4  -3.14931   CGTACTGCCGGGGCA                 TGAT CGA ATCA                 TTCATCCGCCATGCA  48 48
 C1I96_00500 NONE
 C1I96_00505 NONE
 C1I96_00510  123136 ..  123152 +    -8  -2.89185   CTGCATCATTGCCAT              TTCGGG CTTTC CCCGAA              TGATTATCCTGTGTT  59 6
 C1I96_00515 NONE
 C1I96_00520  128369 ..  128389 +  -3.2  -2.99649   TCAAGGAAAGACTCC           CGACGCTAC AGTC GGAGCG-CG            TATCTATGAGGATAT  45 214
 C1I96_00575 NONE
 C1I96_00580  140458 ..  140484 +  -4.4  -3.84674   CCGGGAGATTTACCT         GTGTCTTCCT GAAGAAG GGGAGGGCAC         TTATTCTCGTGAACT  57 437
 C1I96_00595  143487 ..  143503 +    -3  -3.05384   CGAATGCTGGAATTT             TCC-CTG AAAG CAGAGGA              TTAAATCGCCAAGAA  43 5
         kbl NONE
 C1I96_00610  148201 ..  148225 +  -5.5  -3.86524   GCCATTCCAACAGCT          CCCTGACGCCG TAT CTGCGGCAGCG          TTTCTCCCCCGCTCT  61 20
 C1I96_00615 NONE
 C1I96_00620 NONE
 C1I96_00625  153062 ..  153088 + -16.7  -3.30457   CCCCTCCACAAAAAA         GCCCCGTTCAT ATTTC ATGAACGGGGC         TATATTAATTTTTCA 100 296
 C1I96_00645 NONE
 C1I96_00650  156642 ..  156656 +   -10   -2.7458   GAATCTTTTTTATGC               CATCCC CGC GGGATG               ATTCTGGATTTTTTC  66 67
        thiS  156904 ..  156919 +  -3.2  -3.86524   TCTCCATCGTCGCCG              GCGG CTAGGGTT CCGC               TTTCTGGAACAGTCT  55 18
 C1I96_00660  159015 ..  159030 +    -9  -3.21099   AAGGGGCAGAAACTC              TCCCTG GCAA CAGGGA               TCATTTTATCCTGTC  67 185
 C1I96_00665  161401 ..  161420 +  -3.6  -4.57569   AGCGGCAGCCTCTCC            GGAACAGA ATCG TTTGTTTC             TTTTTCCCCCAATCG  66 289
 C1I96_00670  161881 ..  161899 +  -4.6  -3.13403   CCTTTTGCAACGGTT             TGCTTC ATAAATA GAAGCA             TATTCCTGCACAAAC  50 16
 C1I96_00675  162201 ..  162223 + -15.6  -5.69262   TTTTCGCCTGATTCA           GGCTCCGGAT CCG GTCCGGAGCC           TTTTTATTTTTCTCC 100 52
 C1I96_00715 NONE
 C1I96_00720  169354 ..  169366 +  -4.9  -3.14211   TAAAGGCATGGCCCA                TTCAT GCC ATGAA                TTGCTGAAAAAAGAT  50 6
 C1I96_00725 NONE
 C1I96_00730  170613 ..  170625 +  -3.4  -3.91032   TGAATCCAGAAAGCT                CGTT CTTTC AACG                TTTCTCCCCTCCTTG  55 345
 C1I96_00735 NONE
 C1I96_00740 NONE
 C1I96_00745 NONE
 C1I96_00750  175997 ..  176016 +  -3.6  -3.85698   GACAGGGCAGCAAGG            GAATGACT GAAG AATCATTC             TTTGTACCCCCCACG  55 108
 C1I96_00775  182766 ..  182790 + -15.1  -4.79826   TAACTTAGACAAAAA          CGCTGACTAGG TAT TCTAGTCAGCG          TTTTTCATAATATAT 100 124
 C1I96_00785  183625 ..  183648 +  -3.9   -4.1552   AACTAGAGTCTTAAC          TTTTGGGAA TTGGTT TTCCCCAAA           TTTCTTAGAAGACTA  62 27
 C1I96_00790  184272 ..  184287 +  -2.6  -4.87892   TGAAAAATATCGTTC              TGAATT TGAA GATTCA               TTTATTTTATTAAAA  71 285
 C1I96_00805  186484 ..  186508 +  -2.7  -3.79481   TCGCCTTCTTTCCAG          GGACAATACGC GCA GCCGCTTGTCC          TTTACCTTGAATTTC  53 139
 C1I96_00855 NONE
 C1I96_00860 NONE
 C1I96_00865 NONE
 C1I96_00870  199702 ..  199723 +  -4.3  -4.19953   ATGCCTGGTTTCCAT           GCCCCTTTC CGCG GAACCGGGC            TTTTAGGCTTGCCTG  62 103
 C1I96_00875  201473 ..  201499 +  -2.2  -3.41961   CAGACAGCCCCGCGC         CCCCGTCC GCGGACCGGAA GGACGGTG         TTCATTAATCGTCAT  46 470
 C1I96_00890 NONE
 C1I96_00895 NONE
 C1I96_00900  203748 ..  203771 + -13.9  -4.13767   CCCGCACATAAAAAA          CCGGAGGGA TTATTT TCCCTCCGG           TTTTCGGATACGGCC 100 123
 C1I96_00910  206886 ..  206918 + -14.9  -4.86731   CCTTCCTTTTCCGGA      AAACCGGCTTCCCCT GAC AAGGGAAGCCGGTTA      TTTTCTTTACGGAGA 100 52
 C1I96_00915  209095 ..  209106 +  -5.8  -3.68351   GATCCGCCGCTGGAA                CAGG GCTC CCTG                 TTTGACTCCTGAAAC  61 2
 C1I96_00920  209299 ..  209333 + -15.1  -4.37886   ACAAGCGGCTCCATC     ATAACCCGCTCAAGG TCAAT CCTTGAGCGGGTTGC     TTTTATGAGGCGTGC 100 28
 C1I96_00925 NONE
 C1I96_00930  210305 ..  210336 + -11.6  -3.90291   CCGGATGCCATGAAA      GAGCCTCCGTGC AAACATCC GCACGGAAGCTC       TTTCATTAACAGGAT  88 118
 C1I96_00945 NONE
 C1I96_00950 NONE
 C1I96_00955 NONE
 C1I96_00960 NONE
 C1I96_00965  217822 ..  217832 +  -8.2   -3.6215   TCAAATAGCTTCTGA                 GGCG CTC CGCC                 TTTCCGCTCCCTTCC  71 264
 C1I96_00975  219563 ..  219576 +  -4.5  -3.90048   GTTCATCATCGGAAT               GCC-GG TAG CCAGGC               TCTTTTTGGAGCCGC  59 196
 C1I96_01025  228981 ..  229008 + -15.7   -4.4267   GTAGGCCCCCTCAAA        GCCGGACATTG AATTTC CAATGTCCGGC         TTTTCCGTTTTCAGC 100 56
 C1I96_01030  230312 ..  230327 +  -6.8   -2.6914   TTTTTCTATCGTGCT              GGC-GCC CCC GGCCGCC              CTTATATAAAAACTC  50 198
 C1I96_01085 NONE
 C1I96_01090  245203 ..  245213 +  -6.8  -3.16683   TCCTCAACTCTTTCT                 TCCC CAT GGGA                 TTCATGAGATAGCCT  57 3
 C1I96_01095 NONE
 C1I96_01100  247171 ..  247186 +  -3.3  -4.56597   TGTGAGAGGCGAAAA              CATGT AAGTCG ACATG               TTTTTCAACAGGAAC  66 114
 C1I96_01105  247569 ..  247598 +  -7.1   -2.7728   CCTCTCCCTTCATCC       CG-CGCCATGCGTG CCA TGCGCATGGCGTCC       TCCTTCCCCTTTCAA  57 42
 C1I96_01110  248064 ..  248074 +  -4.6  -2.56596   AGAAAAGCTCGCACT                 CCTG ATG CGGG                 TGGCTTCCTCCCGGC  46 21
 C1I96_01115  248720 ..  248750 +  -4.1  -4.48333   ACGGAAATCGGTACC       CAGACATTTTTTG CTGGT CAAAAAAGCTCTG       TTTTCGTTAGTATGT  65 333
 C1I96_01125 NONE
 C1I96_01130 NONE
 C1I96_01135  252177 ..  252200 +  -5.2  -3.33037   GAACATTCCCGCAGG          CCCTCCGG-CT TCC AGACCGGGGCG          TTCCTCCTTTCCCGT  54 108
 C1I96_01140 NONE
 C1I96_01145  254122 ..  254134 +  -3.3  -3.54459   CTGGACTAATTCAAA                GGGAG TTG CTACC                TTTCGGGGCGGTTCC  50 83
        kdsB NONE
        pyrG  256543 ..  256576 + -22.7  -3.81488   TTTCATTAAGCCCGG     GGCCTTTTCCGGAAT TTCC ATTCCGGAAAAGGCC      TTCTCTTTCCAGGCA 100 44
 C1I96_01160  258504 ..  258520 +  -7.9  -3.02511   CATGTTGACCTGCCG              GGCCGGA GTT TCCGGGC              TGTTCACCGGATCCA  60 376
 C1I96_01170  265579 ..  265609 + -16.9  -4.52589   TTTCCATTCCGTTTC       ACGCCGCTTTCCC TTTCC GGGAAAGCGGCGC       TTTTGTGTCCGGGAG 100 54
 C1I96_01175  266749 ..  266780 +   -11  -5.22006   TATATCCGGATTATT      CAGAAAAACGGGCA TTGC TGCCCGTTTTTTTA       TTTTTCTTCTCCTGA 100 82
 C1I96_01190 NONE
 C1I96_01195  273711 ..  273739 +  -3.8  -3.67597   CAGGCAGGATATGGC       GCACCA-GCGG CACCGTAA CCGCATGGGGC        TTGTTGGATAAAACG  52 512
 C1I96_01220 NONE
 C1I96_01225 NONE
 C1I96_01230 NONE
 C1I96_01235  284607 ..  284619 +  -2.7  -4.14874   AATTATATAGAATAG                TCTTG CTG TAAGA                TTTTCAGAATATTCT  59 348
 C1I96_01240  285806 ..  285822 +  -2.4   -3.9712   ATTAATAGCAATGAA              TAAAAA ATCAC TTTTTA              TTTATAATCAACTCA  55 45
 C1I96_01245 NONE
 C1I96_01250  287587 ..  287607 +  -4.7  -3.35526   TCTGATTAAATATTT            TTGAGGATG TTG TATCCCCAA            TTCCATTTCTAGTTG  52 32
 C1I96_01255 NONE
 C1I96_01260 NONE
 C1I96_01265  289828 ..  289838 +    -4  -3.87869   AACTGCAATCCATAT                 TGTT CAA AACA                 TTTATGAAAAATTAA  57 8
 C1I96_01270  291448 ..  291459 +    -3  -3.93875   TCGTCATTTTAATTC                GTAA TTGT TTAC                 TCTTGTTTTTTCATC  54 124
 C1I96_01275  292275 ..  292287 +  -6.3  -3.67296   CACCCGGTCACAAGC                GGATT CAG AATCC                TTTGAATCCCTGATA  58 344
 C1I96_01285  293805 ..  293817 +  -9.1  -3.14132   CTTCGGCAGGAACAA                CGGAG TTT CTCCG                TTGCTGAAAGAAACA  67 75
 C1I96_01290 NONE
 C1I96_01295 NONE
 C1I96_01300 NONE
 C1I96_01305  298845 ..  298866 +  -4.4  -3.23708   GCCGCACCGCAGGGT           TGACCGGA ACCGGG TCCGGTGA            TACTTTTTCCGGGCA  48 61
 C1I96_01310 NONE
 C1I96_01315 NONE
 C1I96_01320 NONE
 C1I96_01325 NONE
 C1I96_01330 NONE
 C1I96_01335  307003 ..  307015 +  -3.4  -3.60627   CGCTTATAGAGTTGC                TTCC GTAGG GGAA                TTTAAGGTAGAGTGG  50 444
 C1I96_01340 NONE
 C1I96_01345  309271 ..  309306 +  -4.6  -3.39895   GAATACGCGTTCCAC    GCCTTCACCGTAGGAA ATTT TGCGGACGGTGAAAGC     TTCATTGATGCCGGA  52 285
         mce NONE
 C1I96_01365 NONE
 C1I96_01370 NONE
 C1I96_01375  314248 ..  314288 +  -2.3  -2.50816   ACAGGCTCTGGCCAA  AATTGGTTAATCCCGGCGG CAA CCGCCCGGAATCTCCAACA  GTTCCTGGCTCCGAC  39 16
 C1I96_01380 NONE
 C1I96_01385  316826 ..  316843 +  -4.8  -5.00234   AGAATGAGCCTGCCG             CTCCGT TTTTAC ACGGGG              TTTCTTTCTTTTTTC  77 34
 C1I96_01390  318428 ..  318454 + -15.9  -4.90477   CACGTTAACCCCTCA         GGACCGCTTCC GCAAA GGGAGCGGTCC         TTTTCCTTTTTTCTA 100 78
 C1I96_01395  319180 ..  319192 +  -3.3  -2.52896   TGATCCCTCCATGCC                GGGCA ACC TTCCC                TGACTTCCCCCCTGC  42 10
 C1I96_01400  319834 ..  319852 +    -3   -4.7497   CCGTCACCGCAATAT             CCGATTTG GGC CGGAGCGG             TTTTTCCTCAATGGA  70 357
 C1I96_01420  323444 ..  323457 +  -5.2   -3.6422   ATTCCCGCGCCACGG               CGGG AGCGGG CCCG                TGTTTTCAAACAATG  59 139
 C1I96_01425  325391 ..  325409 +  -3.1  -3.89346   GGAACATGTTCACCA             TCTGGTC CACCT GACTGGA             TTTGTCCAATAAAAA  56 280
 C1I96_01440  330889 ..  330916 + -17.8  -5.00884   TTGGAAAAATATATT        G-AGGGAGGCGGG TAT CCCGCCTCCCTGC        TTTTTTCCCGCCCGT 100 80
 C1I96_01450 NONE
 C1I96_01455 NONE
 C1I96_01460  339249 ..  339260 +  -7.2  -3.02043   GCGGAGCCACCAGGG                CGGC GCTG GCCG                 TATTGGAACAGAATT  56 314
 C1I96_01480  342914 ..  342939 +  -5.4  -3.85698   CCCAGCAGCCCCATG         GCAGCCGGATG TTCCT CATCCGCC-GC         TTTGTGCCACAGCCC  61 491
 C1I96_01490  344676 ..  344705 +  -4.2  -2.94232   ATGCGGGGAAATCCG       GTAAACGGGCTG CAACAC CAGTCCGTACAC        ATTCTTTGCCCCGGG  46 327
 C1I96_01520  349269 ..  349294 + -13.3  -5.03314   CCGGGACATAAACAA         GGGCCA-CTCCG TTC CGGGGATGGCCC         TTTTTTGGAGGTAAA 100 53
         def  352791 ..  352801 +  -6.8  -2.71712   CCTTCAGGCAGGACG                 GAGC GCC GCTC                 ATTTCCAGGCACACG  50 440
 C1I96_01550  355475 ..  355509 + -19.4  -4.57073   CTTGTCCCTCTTACG     CAACGGCCGCCTTTCT TCG GGAAAGGCGGCCGTTC     TTTTTGAAACCGGTG 100 49
 C1I96_01620  367876 ..  367887 +  -5.8  -3.06183   ATCCATGTAGATGCC                GGGA GAGC TCCC                 TTCAATAGGCATCGC  52 136
 C1I96_01630  368500 ..  368515 + -11.8   -4.9445   TCGACCAATTTCCAA              GCCGCC TCCG GGCGGC               TTTTTGATTACTTAT 100 34
 C1I96_01645  371807 ..  371837 +  -7.5  -4.37658   CAACGTTTTTCCTTT       TCTTCCGAGGCCG GCTGA CTGCCTGGGAGGA       TTTTATCCAAAGCTT  76 57
 C1I96_01725  386345 ..  386358 +  -3.8  -2.52464   AAGCTGAAAAGAGGA               TCCG ATATTC CGGA                TCGATTCCAGAGAAA  44 34
 C1I96_01730  387175 ..  387189 +  -7.8  -4.04071   GGTTCTCCGCCAGCC               TGGCCT TCC GGGCCA               TTCTTCTTAATCTTT  73 136
 C1I96_01735  388387 ..  388416 +  -9.3  -5.07652   CACTGAACACAGAAA       CGCCCCG-GACG AGCAAAA CGTTGCGGGGCG       TTTTCTTTTGGGCGA 100 57
 C1I96_01795  399481 ..  399506 + -13.3  -4.65263   AATCTTTTTTCTACT         CCGCCGCAG TTTCCCCT CTGCGGCGG          TTTATTTTACACCGT 100 57
 C1I96_01935  419832 ..  419844 +  -7.7  -2.64933   AAGGTGTTGACATAT                CAGCA AAA TGCTG                TAATATCAATGCATG  58 425
 C1I96_01945 NONE
 C1I96_01950  422428 ..  422453 + -18.3  -5.40279   TATATTACTTGCTTC         GCCCCTTGGCC TCCG GGCCAGGGGGC          TTTTATTTTCTTTTG 100 59
 C1I96_01955  423157 ..  423169 +  -2.7  -2.91274   CTGAAACTACTAAAG                GGTAT AAG ATATC                TGTAATTCAAATGAA  42 229
 C1I96_01960  424209 ..  424227 +  -3.2  -3.82261   ATTTTTATCCTATTA             TATAGG GCTTATA CCTATA             TTAGTTTTATTAACG  55 377
 C1I96_02010  432471 ..  432488 +  -6.3  -5.72622   ATAATGCCGACCCGT             TTTTCCG TGAG CGGGAAA              TTTTTTCTTTCTGAC 100 37
 C1I96_02025  434176 ..  434191 +  -3.9  -3.29144   CCATGCGGGAGCATT              GGCGG GAACGG CCGTC               TTGTAGGGGAGCTCC  48 502
 C1I96_02060  439296 ..  439308 +  -4.8  -3.57561   CATGCAGGGCCACCA                GCTG GCGCG CAGC                TTTCACCACTTGGCC  54 110
 C1I96_02070  440652 ..  440679 + -17.1  -5.29846   AGACAGATTACTCCG        GGCGCCTCCAT CAAGCA ATGGAGGCGCC         TTTTTGTTTGCAATT 100 55
 C1I96_02075 NONE
 C1I96_02080 NONE
 C1I96_02085  442199 ..  442213 +  -2.1  -5.06414   GCCATTTCCTGCCCG               GAGTT TTTTC AGCTC               TTTTTATTGGCCGCA  73 63
 C1I96_02115 NONE
 C1I96_02120  446679 ..  446689 +    -4  -3.04248   GATTTCCAGTCGTAA                 TATC ACA GATA                 TGTTCACCAATATTA  47 112
 C1I96_02125  449674 ..  449704 + -14.7  -4.74801   AAAAACTCCGTTCCA      GCCGCCGGG-CTCC ATCA GGAAACCCGGCGGC       TTTTTCATCACATTA 100 50
 C1I96_02130  452483 ..  452499 +  -3.7  -2.74192   CTTTCCTAACCATCT              ATCATTC CGG GAATGAA              TAATATTCAAAAGTA  42 32
 C1I96_02135  453612 ..  453625 +  -5.2  -3.97602   CGGCTCGGAAAAATC               CGGC AAGAAG GCCG                TTTCTCCGTCTCTTC  64 300
 C1I96_02220  463953 ..  463981 + -17.6  -3.76402   CATGACATAGAAAAA        TCCGTTTCCGGA ACGCA TCCGGAAACGGA        TTTCATCAATGAACT 100 242
 C1I96_02235 NONE
 C1I96_02240 NONE
 C1I96_02245 NONE
        xseB NONE
         dxs NONE
 C1I96_02260 NONE
 C1I96_02265  474010 ..  474023 +  -4.5  -3.01712   CCTATCCCGCTTTCA               TCCTC AGCA GGGGA                TGTTCCCCGCCCCGC  49 49
 C1I96_02270  475247 ..  475263 +    -3  -3.28001   CCCCTGCGGAAGCCC             TTCC-CG CTGG CGTGGAA              TTAGCTTTCACAGTA  47 43
         der NONE
 C1I96_02280  477868 ..  477892 +  -2.8  -3.13403   AACATCCTCCTCCAC          CTTCCCCC AATGGATAA GGGGAAAG          TATTGGTCCCGGAAC  43 207
 C1I96_02315 NONE
 C1I96_02320 NONE
 C1I96_02325  489893 ..  489904 +  -3.6  -3.35384   GTACGTATAAACCCC                GTCG TACA CGGC                 TCTTGTATCCATTCT  48 280
 C1I96_02340 NONE
 C1I96_02390 NONE
 C1I96_02395  504552 ..  504563 +  -7.2  -3.28712   CAGCCCATATTGCCA                GCCG TTTG CGGC                 TTCTGGAAAGAGCCG  59 524
 C1I96_02410  506634 ..  506648 +  -2.8   -4.4767   ATATCACAGTTTATC               GGAAAA TTA TTATCC               TTTTATGATGCGTCC  62 40
 C1I96_02415 NONE
 C1I96_02420 NONE
 C1I96_02425  508295 ..  508319 +  -3.6  -3.63837   AGTCTGAACCATGGT         CATGCTGCCGT CATA ACG-CACCATG          TTGTTCAGCACTTCT  52 468
 C1I96_02455  515626 ..  515651 + -11.8   -5.4505   CCCTCTTCCATCAAA         CCGCCTCCCG TTCATC CGGCAGGCGG          TTTTTTATTGGAGCG 100 48
 C1I96_02460 NONE
 C1I96_02465  518478 ..  518495 +  -5.5  -2.62184   AGCCAGCGTTCCGCA             CGGTCCA GCCA TGGACGG              TCATCTGGGGCGGGC  46 253
 C1I96_02490  525876 ..  525899 +  -3.7  -3.72576   TACCAGAAACAGCAG          GGGGGGACT TCACAC AGAGCCCCC           TTTACTCCAACAAAC  53 59
        thiE  538864 ..  538885 +  -6.5  -3.61328   GGGCATACGCCCTCA           GGGACGGAT GAAG ATCCGCCTC            TTTCAGCATCTTCAT  60 458
 C1I96_02590  559670 ..  559682 +  -3.3  -2.70932   CTGGTCATCCGTCAC                GGAGG GGG CCTGC                TCCTTCAGCGGAGAC  40 469
 C1I96_02605  562800 ..  562828 + -13.2  -5.00616   GGTTTTCCCCACCAG        GGCATTCCGGTT TTTAC GGCCGGAATGCC        TTTTTTGCGGCACGA 100 49
 C1I96_02645  571492 ..  571505 +  -3.1  -4.46926   CTGCGGACATCAAAA               GTTGG TGCA TCAAC                TTTTCTCATCACCTC  64 214
 C1I96_02665 NONE
        lpxD NONE
 C1I96_02690  578772 ..  578799 +  -6.2  -4.60924   GGAACTTCCCTTCTT        CCCGGTCAG-GCC GAG GGCCCTCACCGGC        TTTTTGACGGATTTC  75 157
 C1I96_02715 NONE
        rpsU  584982 ..  585007 + -11.9  -4.89009   ACCCAATTTCCATGA         GGGCAACCCTT TCTC AAGGATTGCCC          TTTTTGCTTCCCTCT 100 65
        hemL  586387 ..  586402 +  -3.2   -2.8294   ACAGGAACCATGCTG              CTTCTG TCCT CAGCAG               TCGTTATGGCAGCTC  43 105
 C1I96_02730  587422 ..  587439 +  -8.3  -3.54919   GAAGCCCGCTAAATA             GCGGGCG CCAT CGCCGGC              TTTGCCCCCCTCCTT  69 29
 C1I96_02750 NONE
        ribH NONE
        nusB NONE
 C1I96_02765 NONE
        rlmN  598227 ..  598247 + -12.6  -4.17089   AAAGAACGGATGGAC            GCCCCGTT GACGG AACGGGGC            TTTTCCGAATTTGCA 100 16
        dnaB  599838 ..  599848 +    -4  -3.28924   ATTAACAATCCGGGG                 TCAA GAT TTGA                 TTCTAAGAGAAAATA  50 73
 C1I96_02780  601039 ..  601066 + -18.6  -5.07652   GTCTTTTTTCCTCAA        CAGCCTGTATGC CCAC GCATACAGGCTG         TTTTATTTTCAGGCG 100 54
 C1I96_02785  601994 ..  602013 +  -5.6  -2.71731   GCGACAGCGACATCG            GCTCCGGA GCGT TCCAGGGC             TCCTTCCGCCATCGC  46 235
         pyk NONE
 C1I96_02800 NONE
 C1I96_02845 NONE
 C1I96_02850 NONE
        dprA  615488 ..  615513 + -16.9  -4.72986   TTAATAGAGAAAAAA         GGCCGCGGATT ATCC GATCCGCGGCC          TTTTTCGTCCGGCTC 100 487
 C1I96_02860  616562 ..  616582 +  -9.7  -3.26722   TGACCCGCTATCAGT            CCTGCCTAT GTT ACAGGCAGG            TATTGTAGGTCTCCC  70 77
 C1I96_02865 NONE
        gcvT NONE
        gcvH  619320 ..  619345 +  -9.7  -4.87133   CATTCTTTCCTCCCC         CGCCCCGGTGAT TCC ATC-CCGGGGCA         TTTTGTTTGGCCCGT 100 43
 C1I96_02880  622269 ..  622294 + -11.2  -5.29716   CCTTCCTTTCAAAAA         GGCTGTTCCA TTCATT TGGAGCAGCC          TTTTTCTTATGTTCA 100 50
 C1I96_02885  623941 ..  623951 +  -6.8  -3.15249   CACGGCCCTCAAAAC                 GGCA CCA TGCC                 TTGATGACGCGTATC  54 401
 C1I96_02905 NONE
 C1I96_02910 NONE
 C1I96_02915  632277 ..  632291 +  -4.2  -3.56643   CGGCAGGCGGCATGA               CTGCGT CAC AGGCAG               TTTCCCCGCTATCCC  52 128
 C1I96_02920 NONE
        purM NONE
 C1I96_02930  635908 ..  635921 +  -3.1  -2.99859   CCGTGCATACGATTT               GCC-CT TGT AGCGGC               TCCCTTTTTTTGGGT  43 16
 C1I96_02935 NONE
 C1I96_02940 NONE
 C1I96_02945  638156 ..  638173 +  -5.5   -2.7419   GAACTCGCCCGCCGG             CGCACTT AAAA AAGGGCG              TGCTTCAAATCGTCT  48 120
 C1I96_02950 NONE
 C1I96_02955  639125 ..  639147 +  -3.4   -2.6062   CTCCATGCCTGTTTA           TTGGTTTGCC CCC GGAGAACTAA           ATCTTCTATCATGGA  42 56
 C1I96_02960  639730 ..  639754 +  -2.8  -2.62983   TGATCAGCACCCGCC         GGGG-GC-GGAT CTG AGCCAGCACCCC         TCGTATCAGCATGCA  41 12
 C1I96_02965 NONE
 C1I96_02970  643537 ..  643564 +  -5.5  -3.12895   GGAGACTCAACGCAG        CAGCCATCATC ATGGAC GCTGAAGGCTG         TGTATTGCTGGGCAA  52 86
 C1I96_02975 NONE
 C1I96_02980  645823 ..  645848 + -17.7  -5.32882   GCCTGCTTTACAGGG         GGCGGAAGTTC TTCG GAACTTCCGCC          TTTTTTATGATGATC 100 46
 C1I96_02990  649939 ..  649949 +  -2.4  -3.14602   AAAAGCATTGATAGG                 GAGG GAA CCGC                 TGTTACTGAGCTCCG  43 112
 C1I96_03000  651986 ..  652010 +    -5  -2.71712   TTGCCCCACGATCCA         AT-GCCGGCAT ATAA ATGCCGGCCAC          CTTTCCCAGAACCAC  46 54
        rsgA  653167 ..  653178 +  -2.2  -3.31144   CATGACTGATTCGCC                GTCA AAAT TGGC                 TTGTCAAACTGCAAA  45 32
 C1I96_03010  654306 ..  654316 +  -4.6   -4.2558   TCTCCTTGAGCACGT                 CTGC CAG GCGG                 TTTTCATCACACCTG  65 149
 C1I96_03030  657380 ..  657419 + -14.2   -4.9725   TGGCACGGAATGCGC  CGGCGCAGCAGAAGGAGG GCAA TCTCCCGCTGATGCGCCG   TTTTTCTCTCCGCGT 100 61
 C1I96_03050 NONE
 C1I96_03055  664243 ..  664253 +    -4  -4.53034   TGCCATTCGCTCATT                 TTTC CAT GAAA                 TTTTGCTTGTCTAAA  68 485
        rplU NONE
 C1I96_03070  664964 ..  664993 + -19.3  -5.05079   CTCTATCTCCCTGCA       GGGGCGGCCATCC ACAG GGATGACCGCCCC        TTTTTCTGTCCTTCT 100 52
 C1I96_03075 NONE
        sufC NONE
        sufB NONE
 C1I96_03090  669060 ..  669083 +    -3  -4.21908   GAAACCCAAAAAGAC          GGAGAGACGG TCCC CTATCCCTCC           TTTTCCGTCCTGATA  59 53
 C1I96_03100 NONE
        bioB NONE
        bioA  676173 ..  676211 + -15.2  -4.79352   ATAATTTGACAAAAG   CCGGGATGCGGCAGCT ACAATAC AGCCGCCGCGCCCCGG   TTTTCTTATGAATGC 100 113
 C1I96_03115  677124 ..  677142 +  -8.2  -2.78596   CTTCGGGACAGGGGT             TTGTAAGG ATA CCTTGCAA             TCTAATACCGCCATG  62 80
 C1I96_03120  678261 ..  678293 + -19.9  -3.17075   CAACCTCCCTCCTTT      CATCCCCCGTTGCGT AAC GCGCATCGGGGGATG      TTACATTGCGGAGAG 100 58
 C1I96_03160 NONE
 C1I96_03225  699859 ..  699875 + -10.8  -3.31726   CGGGCGGCGGAACTC              CCGGCC AGGGC GGCCGG              TGTTCTCTGAAAAAA  78 42
 C1I96_03230 NONE
 C1I96_03235  703204 ..  703217 +  -2.3  -3.63515   ACCATAAACGCGCTC               CAGCT ATTG AGCAG                TTGTTCAAAATAGGC  50 154
 C1I96_03245 NONE
 C1I96_03250 NONE
 C1I96_03255 NONE
 C1I96_03260  707431 ..  707471 +  -9.9   -4.8622   TTCCCATTCTTTTCA  GGCATCCGTGATTCA AAAGTAACAAA TCAATCACGGATGCC  TTTTTCATTGAACGG 100 50
 C1I96_03265 NONE
 C1I96_03270  709515 ..  709550 + -19.1  -4.18018   CATGCTGATTTCCCG    GGCCGGAAGGGGAGG CAATGA CCTCCTTTTCCGGCC     TTTTCCGTACCCGGA 100 49
 C1I96_03275  710156 ..  710166 +    -4  -4.23892   ATTCTGGTATCTATG                 GAAA GGC TTTC                 TTTTGCCTCGTTAAC  62 101
        cysE  711143 ..  711165 +  -2.7   -4.2018   ATAGTTTCAACCTCA           ATGCATTGA AATTC TCAATGCGC           TTATTTTGAACATTT  59 149
 C1I96_03285  717078 ..  717108 + -19.8  -3.90744   GGAGTATATATCAAC       GGAAGCATCGCGGC CAT GCCGCGGTGCTTTC       TTGTTTACGGCGGGC 100 53
         tkt  721655 ..  721685 + -16.2   -4.7497   CTTCATCTCCTTTCA       GGGGCTGTTCCG CATCCGC CGGGACAGCCCC       TTTTTCATGCCTCCC 100 56
 C1I96_03310  724937 ..  724964 + -10.5   -5.0925   CTTTCCCCCCTCCCA        TGGGAGCCGGT CTTTCC GCCGGCCCCCA         TTTTTCATTTTACCA 100 45
 C1I96_03315 NONE
        purL  727867 ..  727880 +  -2.3  -3.01712   CCCCTATTATTGATC               TCCCG AAAC CGGCA                TCTTACCAAACAAAC  42 28
 C1I96_03325 NONE
 C1I96_03330  729468 ..  729496 + -13.1  -5.06414   AAAAACTTTTTCCAG        GCCCCGTCTGC TTCCTGC GCAGTCGGGGC        TTTTTATTCCCCGCC 100 52
 C1I96_03335  730714 ..  730753 + -10.8  -2.75183   GGACATGAACCGTCC TGCCGGGGAAA-GGCGCG CAAAAA CG-GCCATTTCCCCGGCC  TGCTTCCATGCGGCT  74 75
 C1I96_03350  735490 ..  735511 +  -5.7  -3.12999   GACTAAAGACGGAAT           CTCCGGAGC AAGC GCTCCGGCC            TTGCGTCTGCCGTAC  55 35
 C1I96_03355  737298 ..  737322 + -18.6  -5.00616   AAATCCGGCTTTCCG          GGCCGGGCGA TACCC TCGCCCGGCC          TTTTTTACGCCGCCA 100 51
 C1I96_03360  738854 ..  738885 + -23.1  -3.62224   AAAAACTCAACACAA      GGGCCGTCTCCCC CCTTAC GGGGAGACGGCCC       TTATTAAAGAAATAT 100 421
 C1I96_03380  744533 ..  744543 +  -2.4  -5.15969   TTGGTGCCTACAGCG                 CTGG CCT CCTG                 TTTTTTGGCTTCCAG  75 231
 C1I96_03410  747945 ..  747963 +    -9  -2.69964   AAAACATGCCGCATT             TTTGTCAT ATC ATGACAAA             TAATATACTTCCCGA  63 56
 C1I96_03415  748580 ..  748596 +  -2.2  -3.09878   TCACCCGGCAGACAG              GCACAT ACCGA ATGGGC              TGTTGCATCCATCCG  43 119
 C1I96_03420 NONE
 C1I96_03425  750582 ..  750611 +  -5.1  -3.20164   TCCTTCGCCCCGAAT      GCCCCGCGGATAT GCCGGA AT-TCCG-GGGGC       TTCCCTTCCCTGTAC  52 209
 C1I96_03465  755987 ..  756012 + -14.8  -5.64421   CCGCTCTTTATCAAA         CCGTCCGGAA AAGGTA TTCCGGACGG          TTTTTTCTTTGCAAT 100 56
 C1I96_03470  757629 ..  757658 +  -4.9  -4.62471   GTGAAAACCGGAGCT       GGCCCGGCG TCCCCCTTTTTC CGCCGGGCG        TTTTTGCAGGTTGAA  71 37
 C1I96_03475  758976 ..  758987 +    -3  -3.26449   AACAATGCGTGTTCC                TGAT TAAT ATCA                 TTCCATTATGTCCCG  45 59
 C1I96_03480  759787 ..  759810 +   -16   -4.8048   ACCCCCCTTTCTACA          GGCCGGTCCT TCAC GGGACCGGCC           TTTTTCATCTCCGGA 100 53
 C1I96_03485 NONE
 C1I96_03490  761430 ..  761440 +  -2.4  -3.12304   CGCAGGACGGATTTT                 TCCG GAA CGGC                 CTGTTTTTTCCTCCT  43 123
 C1I96_03495  763252 ..  763276 +  -6.3  -3.68798   CCACGGCAACATTCC          TGCCTCCCGGG CAT TCCGGGAACCA          TTCATTATTTTCACA  63 194
 C1I96_03500  764792 ..  764817 +  -8.3  -3.53091   ACAAGAAAGAAAAAA         CCCTGTAAACT ATTG GGTCTACAGGG          TTTCAAAAAAGGAAT  69 226
 C1I96_03525  767633 ..  767645 +  -6.2  -4.62904   TCAGGGTAAGCTGGC                GCCC CTGCC GGGC                TTTTTGAACCTGTTT  75 217
 C1I96_03535  768944 ..  768960 +  -2.1  -4.61527   ACCCTGTTGAACTGG              CAGAGGG AAG CCCTGGG              TTTTTAAGCGGTTTT  63 2
 C1I96_03545  770225 ..  770238 +  -3.8  -3.53012   AGTTGCCACCGCATC               CTCC ACTGAA GGAG                TTTCCAGGAACGCCG  52 17
        lpxK  771530 ..  771544 +  -3.6  -2.91735   ACATGCGTTGCCCTT               TTTCTT GAA AAGAAG               TATCTAAAATGTTCC  43 85
 C1I96_03555  772113 ..  772133 +  -2.5   -2.6162   GCCTGAAATGAAAAA            GGCAGTTTC CTC GAAAATGCG            GTCTTTACGCCCTTC  39 35
 C1I96_03560  776880 ..  776903 + -12.4  -2.96405   TTTTTCCCCTTCCGT          CGGCGGCC AAATATCC GGCCGCCG           CTCTTTTTCCATAGA  81 68
 C1I96_03565 NONE
 C1I96_03570 NONE
 C1I96_03575  779368 ..  779380 +  -9.1  -3.30798   AACCTAACGGGCAGA                TGGCG AAA CGCCA                TATTGATTCATTATC  69 85
 C1I96_03580 NONE
 C1I96_03585  781083 ..  781098 +  -3.2  -3.40899   GGCGATGCCGGCATC              CCGCAT TGCG ATGGGG               TTATGCTCAAACCTT  48 163
 C1I96_03600 NONE
 C1I96_03605  784614 ..  784641 +   -20  -3.73402   ATTTTTTACTGGAAA        GCCGCTTCATCC ACCC GGATGAAGCGGC         TTTCGTCCAAGGTCT 100 4
 C1I96_03615  785965 ..  785987 + -13.5   -5.1356   GCGGGCCTTCCTTTA           TCCTCCGGT CCTCA ACCGGAGGA           TTTTTATTGCTCCAC 100 94
 C1I96_03635  797585 ..  797600 + -11.8  -5.14563   TGTCCAGAAGAAACA              GCCGCC TCCG GGCGGC               TTTTTTCGTCCAGAA 100 44
 C1I96_03640  799282 ..  799310 +  -5.3   -4.7254   TGACAGCCCATCATC        CAGGGAGCT TGAGAAAGATT GGCTCCCTG        TTTTTCATGACCGCT  75 38
         maf  800173 ..  800184 +  -7.2   -3.5936   TCAGGAACCGGGCGC                GCCG GACA CGGC                 TTTCCAGCATTTCCA  63 293
 C1I96_03665 NONE
 C1I96_03670  807754 ..  807776 +  -7.6  -4.37067   AGAGCCACGCAAAAC           GCCTGCGGAA TTA TTCCGCCGCC           TTTTCCTCCTCTTTC  78 60
 C1I96_03680  810378 ..  810399 +  -2.9   -3.2241   AACAAAAACTCTCCT           CCAGATGAA CTCT TTCTACTGG            GTTTTCTACACGCTC  45 18
 C1I96_03685 NONE
 C1I96_03690  812100 ..  812121 +  -5.8  -2.54098   CAACGAACAGGCGTC           CGCCTGCGG CATTT CCG-GGGCG           CTATTCCTTCACCCA  50 58
         rnc  813536 ..  813546 +  -2.4  -3.72576   TAAGCCTTGGACACT                 CCTG TGG CTGG                 TTTGATAGACAGAAG  50 77
 C1I96_03705  815112 ..  815129 + -12.7  -5.14563   AATCAGCTTGGGCAG             GGCCGTG TATT CACGGCC              TTTTTTCATCAGGCC 100 178
 C1I96_03715  816881 ..  816916 +  -5.3  -2.87243   AAGCTTTCTCCGCCG    GCCG-CGCGCGCCG CAATTTCCC CGGCACGCGGCTGC    TCATTGTGGTCATGC  47 519
 C1I96_03740  820432 ..  820444 +  -3.3  -3.70571   CCCGAAGGAACAGTT                CGGGA AAA TACCG                TTTAAGGTATTTATG  53 226
 C1I96_03755  825101 ..  825137 + -18.9  -3.21099   CTCCGGCTGTTTAAA    CAAAACCCCGCGTGC CTGAGGC GCATGCGGGGTTTTG    TTCATCATCCGGCAG 100 51
 C1I96_03775  829660 ..  829680 +    -6  -3.56594   TACAGGCGGCGAATT            TGCCGGGC CCAGT GCCGGGCG            TTTGAGAAAGTTTGA  58 335
 C1I96_03785  830388 ..  830403 +  -4.6  -3.42996   CAGCAATTTCTTCAC              CGGCCA GGTC TTGCCG               TTGTCATAGCTCATG  52 308
 C1I96_03800  833471 ..  833496 + -11.9  -5.07011   AACTCCCTCACCAAA         GGGTGGAATCA TTTC TGATTCCTCCC          TTTTTCATTTCTATA 100 166
 C1I96_03810 NONE
 C1I96_03815  838209 ..  838234 +  -8.3  -5.07011   AGAACAGTCATCAAG         GGATGGAATCA GCAA TGGTTCCACCC          TTTTTCATTTCTATA  93 50
 C1I96_03845  846117 ..  846132 +  -6.8  -3.31501   CGCGCCGCCCGCCAA              CGGCCA GGGG TGGCTG               TTGTAAGCCATTCAT  59 4
 C1I96_03850 NONE
 C1I96_03855  848468 ..  848496 + -14.7  -5.61881   CCTGAACCTGTCACC        GCGCCTTTCCA TCTTTTC TGGAAAGGCGC        TTTTTCTTTTTCCGG 100 55
 C1I96_03865 NONE
 C1I96_03870  852346 ..  852370 +  -2.7  -3.06796   TGGGGAAATGCCAGA          GCCGGCTATTT TTT AACAAGCCGAC          TTAACTCCCCTCCGG  43 103
 C1I96_03875  853893 ..  853905 +  -3.3  -2.52464   CATGCCGCGCATGCC                CTGCG TAC CGCAA                TACATTAAAAGAACC  39 155
 C1I96_03885 NONE
 C1I96_03890 NONE
 C1I96_03895  858757 ..  858785 +  -5.1  -3.44848   TTGAGCATTTCCCCT        GCCTGCCTCAGGG GGC TCCAAAGGCAGAC        TCTTTCATGACACCG  56 37
 C1I96_03900 NONE
 C1I96_03905  860600 ..  860610 +  -2.4  -4.14392   TCCAACAGCTTTTAA                 GCAG GAG CAGC                 TTTTAGGGCTTCACA  57 9
        miaA  861749 ..  861759 +  -6.8  -3.80573   CACATAGTCTATCTT                 TCCG CGG CGGA                 TTTCCTGATACTGAC  63 190
 C1I96_03920 NONE
 C1I96_03925  866015 ..  866028 +  -2.5  -2.98122   CTATAGACTTATTTC               TATAA ACAT TTATA                ATTATTTCAATAATA  42 64
 C1I96_03930 NONE
 C1I96_03945  869388 ..  869400 +  -6.9  -4.08394   GCGCATTGTCTTCCG                GCCTG AAC CGGGC                TTTTGACGACCATAT  68 309
 C1I96_03950 NONE
 C1I96_03955 NONE
 C1I96_03960 NONE
 C1I96_03965 NONE
 C1I96_03970 NONE
        mraY NONE
        murD NONE
 C1I96_03985 NONE
 C1I96_03990 NONE
        murG NONE
 C1I96_04000  883883 ..  883895 +  -4.7  -4.11751   CCAGGTCATCGGAGA                CCGGG ACC CCCAG                TTTTAACCCATTCAT  62 7
 C1I96_04005 NONE
 C1I96_04010 NONE
        recA  887160 ..  887183 + -15.3  -5.36441   TACTGCCATTTCAGG          GCGGCTCCC CTTCCC GGGAGCCGC           TTTTTTCTCTCCGGA 100 62
 C1I96_04020  888287 ..  888299 +  -6.2  -2.55213   CCTGGGCCGGCAAGT                GCGC AGAAC GCGC                TGAGTTCCCTAACTG  50 10
 C1I96_04025  889115 ..  889129 +  -2.1   -2.7898   ATGTAAGACACAGAC               CGTGT CAGCA ATACG               TCCTTGCATCTTGAC  40 164
        leuC NONE
 C1I96_04035  891205 ..  891216 +  -5.8  -2.73542   GAACTGCCCCAGGTC                GCAG CCTC CTGC                 TGATTCAGCATTCAC  51 11
 C1I96_04040 NONE
 C1I96_04045 NONE
 C1I96_04050  895596 ..  895606 +  -3.2   -2.7263   GGACTAGGAATCCGC                 GAGC CAT GTTC                 ATTTGCAGCCCTCCT  42 34
        aroB  896933 ..  896947 +  -5.6   -3.9093   TCCTGTTCCGGCAGT               TCCCGC AGG GCGGCA               TTATTATGTGCTGCC  62 170
 C1I96_04090  902316 ..  902326 +  -2.4  -3.10715   ACGCCTTCAGTCCAT                 CCAC CAG GCGG                 TTCAGTCATGATGAA  43 4
 C1I96_04095  902821 ..  902834 +  -2.5  -2.85996   ACAAGTAACCATTCC               TTTTT ATGA AAAAA                CTTTCCTCCCTGCTG  40 33
 C1I96_04100 NONE
        lptB NONE
 C1I96_04110 NONE
         mpl  906922 ..  906932 +  -2.4  -4.46404   CCTGGTCGTAGGCAG                 CCTG GCC CTGG                 TTTTCCTGTTCCTTG  61 106
 C1I96_04120 NONE
 C1I96_04125  910266 ..  910285 +  -6.4  -2.62933   CTGGTGGAAGAGTGG            GAGGTGGA ATAA TCCAGCTC             TCCTCTCCCGGGTTG  53 14
 C1I96_04130  910982 ..  911005 +  -2.6  -4.62336   CAAAAAAATACTAAA          TTAAATAATT TCTA AATAATTTAA           TTTTTCCAATAAAAT  65 524
 C1I96_04135  914461 ..  914487 + -18.1  -4.29981   CTTGGTTATGGTAGG         CCCTTTCCCGC CCCAC GCGGGAAAGGG         TTTTCCGTATGTTTC 100 70
 C1I96_04140  915508 ..  915537 + -10.8  -5.08255   GCATGTCTGATTCCA       CCCCGGCTTATTC CTCAA GGA-AAGCCGGGG       TTTTCTTTTGCCGCT 100 49
 C1I96_04165 NONE
 C1I96_04170 NONE
 C1I96_04175 NONE
 C1I96_04180 NONE
 C1I96_04185 NONE
 C1I96_04190  926117 ..  926132 +  -4.6  -3.71848   AGGATCGTCCGGATA              AGGAGC ATAA GCTCCG               TTATTGGTGGAAACC  57 304
 C1I96_04200 NONE
 C1I96_04205  928500 ..  928519 +  -9.2  -3.53012   CTCCTGCGGAAAGAG            GGCAAGGC CTAC GCCCTGCC             TTTCCGAACAGGAGA  71 56
 C1I96_04210  929927 ..  929941 +  -5.6  -4.11692   GAAGCTCAAATAAGC               GAGGCC CCT GCCCTC               TTTTCCGGCTCCGTC  64 28
 C1I96_04215 NONE
 C1I96_04220 NONE
 C1I96_04225  933136 ..  933172 + -21.7  -4.15703   AACCTGCTTTTCAGA    CCGCCCGCTTCCTTC ATCTCCG GAGGGAAGCGGGCGG    TTCTTATTTCTGCCA 100 63
 C1I96_04230  934340 ..  934352 +  -5.5  -2.70932   AAGGAAGCACCCGCC                TTCCC TCA GGGAG                TCGTTGACGGACGGC  48 73
 C1I96_04235  935573 ..  935595 +    -9  -3.23452   AGCGCGGGCATCAAT           GCCGCCGGAC ATC GTGCGGCCGC           TTCCCTTGTCAGCGT  65 516
 C1I96_04250  940193 ..  940208 +    -9  -3.15999   CGAGGAAAAAACCTG              GGAAGC GCCG GCTTCC               TTCAGTATATCCACG  63 291
 C1I96_04260  943314 ..  943343 +    -5  -3.13403   ATGCATCTGATGGTC       TTCTATCCTGTC CGCCTT GACGGGACGGAA        TGTTCCTACCCCCAC  50 431
 C1I96_04270  945102 ..  945134 + -13.6  -4.17701   ATAAATAAATTCCCT      GGTTTCCGGAAAGG CCTGC TTTTTCCGGAAACC      TTTATCCTTTATGGA 100 37
 C1I96_04275  945791 ..  945807 +  -3.6  -3.14878   GCGGTGAATAAAGAA              TGGCCC TTCCC GGACCA              TGTTCCGTTCAGCCG  46 30
 C1I96_04280  946679 ..  946695 +  -6.5  -4.36914   TCCTGCATTAAAAGG              CCGGG AAAAAGC CCCGG              TTTTCTCCCGCACCC  74 30
 C1I96_04290 NONE
 C1I96_04295 NONE
        lysA  951330 ..  951361 +  -7.9  -4.06055   CGCCCATCTTTAGAA      TGCCCTTCCAGCG GTAAAA CGAAGGAGGGGCA       TTTCCTTTCAACCGT  73 52
 C1I96_04305  952659 ..  952686 + -18.6  -5.24129   ACGAGTTTAATGCCA        TGCCCGGTTTCT TAAA AGAAACCGGGCA         TTTTTTCTGGAAAAA 100 55
        ilvE  955957 ..  955980 +   -16  -5.46629   TTGGACCAACGAAAA          CGGCTCCGTC ATCC GGCGGAGCCG           TTTTTTTGCGCTATT 100 58
 C1I96_04325  958216 ..  958236 +  -2.4  -4.45664   AAAGGGTCGCGGCGA            CCATCGGC GTCAG GCCGTTGA            TTTTAGTTCCATTAG  63 418
 C1I96_04335  958642 ..  958653 +  -5.8  -4.20084   AAGCAATTACAGTGG                CCTC CAGA GAGG                 TTTTCCATAAGTAAT  69 39
 C1I96_04340 NONE
 C1I96_04345  961607 ..  961631 +  -7.7  -5.57729   TCCATTCCACTACCT          CCGGGGACGGC TAT GCCGTCCCTTC          TTTTTTATATTATTT 100 59
 C1I96_04350  962898 ..  962911 +  -2.3  -4.26903   GTCTTCCCGGTAGTG               GGGCT CCCA AGCCA                TTTTAGTGGCGTACG  60 197
 C1I96_04390 NONE
 C1I96_04395  977632 ..  977643 +  -2.2  -3.21034   ATTAATACCACTACA                TTCC CGCT GGAG                 GTTTTAATATGGCTA  43 115
 C1I96_04400 NONE
 C1I96_04405  979971 ..  979982 +  -4.4  -3.01497   GTAACGTTGAGAGAC                TCTG ATGG CAGA                 TATAGTTTCCCCTGA  47 21
 C1I96_04410  980462 ..  980472 +  -3.2  -3.90048   TAGACCATAGAATAA                 TGGA TAA TCCG                 TATTTTTAGAAACAG  55 60
 C1I96_04415 NONE
 C1I96_04420 NONE
 C1I96_04425 NONE
 C1I96_04430  982628 ..  982644 +  -6.6  -5.26316   GATTCCATCTTGGAA              CAGGAA ATAAA TTCCTG              TTTTTTATACGCTCA  91 76
 C1I96_04435  983655 ..  983665 +  -5.4  -3.65991   CTCTTGGTTCCACCT                 TGGT CGT ACCA                 TTGTATTAACGGGAT  59 6
 C1I96_04440  984540 ..  984556 +  -5.8  -3.53224   CACGCTTACGCTTCC              TGCCGT TTGGC ACGGCG              TTTGCGGACAGCGTC  59 157
 C1I96_04485  991809 ..  991838 + -15.7  -3.02144   AAAGCCGCTTCCACC       G-CCTGGCGCGGCG TGA CGCCGCGCCAGAAC       TGTTCCCGGGGATCG  83 386
 C1I96_04510  997042 ..  997056 +  -5.6   -4.6468   CTTATCCTCCCATTC               CGGATC AAT GAACCG               TTTTCTCTCATTTGC  73 46
 C1I96_04515  998139 ..  998149 +  -8.2  -2.74501   ACAGTTATGCTGTCA                 CCGG AAT CCGG                 CTTTCCCCCATTCAT  61 309
 C1I96_04520  999628 ..  999640 +  -3.3  -4.05446   TGTTCCAGTACATCA                GGACG TAT CTTCC                TTTGTCATTGACAAG  58 71
 C1I96_04525 NONE
 C1I96_04530 NONE
 C1I96_04535 1004438 .. 1004453 +    -6  -3.21416   CTGCTTTGCGGGAAG              CGTGCC TCTT GGCCCG               TTCCTCCTCCCGCTG  55 417
 C1I96_04575 1011831 .. 1011844 +  -2.3  -4.96106   CGCACCAGCATTACC               ACTGG TTGT CCAGG                TTTTTGGTATTTATC  70 401
 C1I96_04590 NONE
 C1I96_04595 1016207 .. 1016217 +  -4.6   -4.4078   TGGGGATGCTGCTGG                 GGGG AAT CCTC                 TTTTACTTCCAGGGG  67 466
 C1I96_04605 1018735 .. 1018747 +  -4.8  -3.25223   CTTCACGGTGACGGA                GGTG CGGCC CACC                TTGATAATATCCGTA  49 243
 C1I96_04615 1019479 .. 1019515 +  -3.7  -5.42862   AGGAAAGCGAAACTG    GAACAGGAAGAAAGCTG ATT CCGTTTTCTTTCATTTC    TTTTTTTCCGCCTGT  81 8
 C1I96_04620 1021076 .. 1021087 +  -2.2  -2.77233   TCTGCAAGGAAATCA                GG-GC ATT GCTCC                ATTTCCCGGTTGTCC  40 142
 C1I96_04625 1022390 .. 1022406 +  -6.6  -2.70788   TTCAAGAGAAACGAG              TTTCCG GCTAG CGGAAA              AATTTTTATAAATCC  50 261
 C1I96_04635 1023148 .. 1023167 +  -7.1  -4.25859   CTCATTTTTTCAATT            CTTCGGC TATTCT GCCGAGG             TTCTTTTCCGTTACC  73 111
        leuB 1027388 .. 1027407 +  -9.2  -3.61398   GTGACGCCATCATCG            CCGCCCTG TAAA CAGGGCCG             TTCTTCCGGCGCCGC  71 15
 C1I96_04670 1028584 .. 1028608 +  -4.4  -3.85296   TGATACGGAACATCA         GCTGT-CC-TTC CTT GAACGGAACAGC         TATTTTCCTTGTCAA  57 38
 C1I96_04675 NONE
 C1I96_04680 1031133 .. 1031153 +    -4  -4.63218   TCGAGCAATCACTGA            GGGATTAA CATCA TTAACCCC            TTTTCTTGCGCGGCG  68 18
        nifJ 1045810 .. 1045839 + -17.2  -5.14563   GCCGCTTAATTTCAA       CGCCCCTGTCCGG CTTAT CCGG-CAGGGGCG       TTTTTTACTGCCGGA 100 48
 C1I96_04750 1047412 .. 1047424 +  -3.3  -4.56597   TTTCAAATTCCTCCA                GTCCG TCC CGGAG                TTTTTCAAACCGCAG  67 303
 C1I96_04765 NONE
 C1I96_04770 NONE
 C1I96_04775 1052970 .. 1052982 +  -9.1  -2.64155   CTCCGCGAGCAGGCT                GAGGG TAT CCCTC                TCCATTTCAGAAAAA  63 47
        holA NONE
 C1I96_04800 1062211 .. 1062225 +  -2.2   -3.7108   CATCCTTGAGCCGTA               TATGAT CCC ATTATA               TTTCCCTGTCGCCAT  50 121
        dnaN 1065380 .. 1065405 + -15.5   -5.8187   GTTCATACAGAGGAA         CAGGCGTCGTG GAGA CATGACGCCTG          TTTTTTTATTGGCTG 100 59
 C1I96_04845 1072466 .. 1072480 +  -5.7   -3.9344   TAAACGCAACAGCAG               CTTGC AAAGG GCAAG               TTTGCTGTTAGAATT  64 64
 C1I96_04850 1076387 .. 1076418 + -15.9  -4.63486   TACCGTTTGAACAGG      CGCCCCGC-CGCTC TTTCC GAGTGCGCGGGGCG      TTTTATTGCCGGGCT 100 54
 C1I96_04865 1081368 .. 1081388 +  -2.5  -2.84229   GTTCCTGAAGAGTAA            TTCCTCCTG CCT CATGAGCAA            CTTTCCTGCAGATAT  40 26
 C1I96_04870 1082212 .. 1082228 +  -9.5  -3.89614   CTGTGTAGGCTCCAA              GACGTAT TCA ATACGTC              TTTATGAAGATTAAG  79 158
 C1I96_04875 1083034 .. 1083078 +  -4.9  -4.20516   TCGGCGTTAAAAAAC GGGCTTCCGGAGAGAAATTAA TAA TTTCTTAATGTCCGGAGGCCC TTTGTTAACTACCCG  64 48
        kdpA NONE
        kdpB 1086835 .. 1086851 +  -2.2  -3.57462   TATTGATATGGTCAT              CAATGC ATGGC GCCTTG              TTTGAAAATCCAATC  47 4
 C1I96_04890 1087534 .. 1087554 +  -3.1  -4.91987   CCTTGGTTCCGCGTC            TTTCTCCGG TTA CCGGGGCGG            TTTTCTTATTGGATT  71 99
        clpB 1092162 .. 1092191 +   -15  -2.63631   TGCCGGAAAAACAAT       GAAGGGCGTCCC CTGAGA GGGCCGCCCTTC        TGATATAAAGATTCC  90 59
 C1I96_04915 1094631 .. 1094648 +  -2.7  -3.73072   GAAGCATGGCGCAAA             TGAAATC GCAA GATTCCA              TTTGGTCCAGCAATT  51 177
 C1I96_04920 1096310 .. 1096330 +  -2.4  -2.75708   CGCCTGGAGCGAAGC            CCGGCACG ACGTG CGTGACGA            CCTTTTTTCACCGAG  40 141
 C1I96_04925 NONE
 C1I96_04930 1096587 .. 1096606 + -10.8  -2.71924   GCGTGGCAAAGAAAA            CGATTGCT GAGA AGCAATCG             CTTTCCAACAAAGTG  72 80
 C1I96_04935 1099601 .. 1099617 +  -2.3  -2.95942   CTCCCCGTCGTGAAT              GACAA CTTGCTC TTGTC              TCATTTACCTGTGCA  42 50
         rrf 1099939 .. 1099978 + -16.4  -4.72497   GCCGGGATTTTTTTC  CATCAGGCCCCGCCAGTC CCTC GACTCGCGGGGCCTGTTC   TTTTCTTGCTCGGTC 100 34
 C1I96_04945 1100251 .. 1100273 +  -9.9  -5.65496   ATTGTTTGAAGAAAT           CCGGGAGAA AATAA TTCTTCCGG           TTTTTATTTTTCCTG 100 104
 C1I96_04950 1102011 .. 1102024 +  -2.3  -4.20707   AGACCTGGTACGGTC               CGGAA TGCT TGCCG                TATTTTTTAGTGGAG  57 46
        nrdR NONE
 C1I96_04960 1103550 .. 1103576 + -10.9  -4.08692   CGGAGATGAGCCGGA         TGAGGGAATGC AAGGG GCCTTCCCTCA         TTTTCCCCGAGGTTG  87 274
 C1I96_04975 1107919 .. 1107935 +  -5.1  -4.68593   ATGATGCTCGCCCGG              GTGGAGA ATG TTTCCGC              TTTTTCCATGATGCA  76 183
 C1I96_04995 NONE
 C1I96_05000 NONE
 C1I96_05005 1117372 .. 1117382 +  -2.4  -4.60041   CCTGCACGGTGCCTA                 CCAG ATC CCGG                 TTTTTCCGGATGGCT  65 182
 C1I96_05025 1120922 .. 1120945 +  -6.8  -2.53903   GATGAAGCGGAACGG          TTTTAAACGG TTAT CCGTTGAAAA           GTGATTTTTGACGCG  52 89
 C1I96_05030 NONE
 C1I96_05035 NONE
 C1I96_05040 NONE
 C1I96_05045 1127505 .. 1127519 + -11.4  -3.05046   TTTAATACCTGCACA               CGGGCA AGC TGCCCG               ATTTTGCCGCCCTCA  78 36
 C1I96_05055 1129468 .. 1129480 +  -5.5   -3.1149   GTAGGGAAGCCGTTC                GGCAG TTC CTGTC                ATTTTGCCATTGACT  52 37
 C1I96_05060 1132231 .. 1132245 +  -5.6  -4.81551   CTGCTGCTGTGCGTC               CGGCTG CCG CGGCTG               TTTTTCCTGTGCCTC  76 517
 C1I96_05115 1146275 .. 1146303 +  -8.7  -4.06419   CCATCCTCTGCAAGT        CCGGGTGCGGTAG GAG CCGCCGCATCCTG        TTGTTTCTCGCGGAG  76 13
 C1I96_05135 1149560 .. 1149587 + -16.4  -5.60993   TTTCAGGATTGTCTC        TCCTCCGGCATT GCGA GATGCCGGAGGA         TTTTTTTATGGAAGG 100 48
 C1I96_05150 1153985 .. 1154005 +  -3.8   -3.8709   CAGGCCGCAGCCTTG            ACCGGGCG CCTAA CGCACGGG            TTTGTCCGCACCTTT  57 25
 C1I96_05165 NONE
 C1I96_05170 1157568 .. 1157582 +  -3.4  -5.09521   CAGCAGGACCTCAGC               CGGTAG GAA CAGCCG               TTTTTCCTTTCTTCC  75 20
         efp 1158291 .. 1158317 + -17.3  -5.14563   TCTGTTCTTTGAAGA         GCCCCGTCCGG TTTGT CCGGATGGGGC         TTTTTTCATGCCGCA 100 53
 C1I96_05185 1162078 .. 1162099 +  -2.1  -4.25104   ACCAGCAGGGGGGTG           GCATCCTTG TGGG CCAGGGCGC            TTTTAATCGCCAGCA  60 360
 C1I96_05195 NONE
 C1I96_05200 1165109 .. 1165127 +  -2.2  -4.39226   TTTTCCGGTGTGCGT             CCCGGAGT AGA GCCGCGGG             TTATTTTATCCTTGT  61 47
 C1I96_05205 NONE
 C1I96_05210 NONE
 C1I96_05215 NONE
 C1I96_05220 1167061 .. 1167090 + -20.1  -4.82901   GTGCGCGGGATGACC       TCCCCTTGTCCGG ATTT CCGGACGAGGGGA        TTTTTATGCGGGCCG 100 84
 C1I96_05255 NONE
 C1I96_05260 1177205 .. 1177219 +  -8.6  -3.92832   GCGCCATTTGAACAG               CGGATT CGA AATCCG               TTATTTAGCGGCTTT  73 394
 C1I96_05265 1180281 .. 1180298 +  -2.5  -3.85698   CTACCACCGCGTGAA             CGCAGGG GTGT CCCGGAG              TTTCTAAAAGAAAGC  52 1
 C1I96_05270 1180820 .. 1180871 + -17.4  -4.13014   AACCGTCTACAGCCG GAAACAGGCGCCGCCCTGCCAGG TAAAAAC CCTGGCAGGGCGGCGT-TCTTCC TTTTCGGAATATCCA 100 49
        cobA 1184357 .. 1184367 +  -3.2  -4.66833   AGCAGAACCGCCATG                 GGAG ACA TTCC                 TTTTTCCAGTTCCCC  67 359
 C1I96_05295 1187420 .. 1187443 +  -5.2  -3.09648   AAGATTGGGAAAAGA          GCAGGGAAAA AGCT TCTTCCCGGC           TGTTCCCGTATGTTA  52 69
 C1I96_05300 1188789 .. 1188802 +  -3.1  -4.59109   AAGGCTGATTATTTA               TTCCT GCCG GGGAA                TTTTTCAGAACTATC  65 153
 C1I96_05325 1195139 .. 1195159 + -13.3  -3.04398   ACGATTGTACAGTAA            TGCCCGGAA AAT TTCCGGGCG            CTTTTCCGGAAGAAA  86 26
 C1I96_05345 1199979 .. 1200007 + -11.9  -3.57263   CGGCCTGCGCCGTGC        GGAGATGAGGAAT TGA ATTCTTCATTTCC        TTTGCCGATGCAGAT  79 327
 C1I96_05355 1202146 .. 1202163 +  -2.7  -3.55444   GGTGGCCGCGGTCCG             CCATG TTCAGTTT CATGG              TTTGGAACGTGGGGA  50 258
 C1I96_05370 1204702 .. 1204715 +  -8.1   -2.7263   AGGAGAAAAGGCCCA               GGCCT GAGC AGGCC                GTTTCCGCCCGTCCT  58 19
 C1I96_05385 NONE
 C1I96_05390 NONE
 C1I96_05395 NONE
 C1I96_05400 1212978 .. 1212999 +  -8.1  -2.82516   GTGCAGAACACGCAA           TGCTCCATGT GAA ACATGG-GCA           TATGCTGATGCAGAG  57 421
 C1I96_05425 1219443 .. 1219459 +  -5.7  -4.36914   GCCCGATGCGGTAGG              CCCGGTC CGT GGCCTGG              TTTTCTACAGCGGGG  72 296
 C1I96_05445 1225162 .. 1225184 +  -9.1  -3.14602   TCATACTCTTCCTGC           CCTGCCACC AAGGG GGTGGCAGA           TCTTAATCGCATAAA  67 191
 C1I96_05450 NONE
 C1I96_05455 NONE
 C1I96_05460 NONE
 C1I96_05465 NONE
 C1I96_05470 NONE
 C1I96_05475 NONE
 C1I96_05480 1228670 .. 1228719 + -15.1   -3.9344   TTAGCGAAGCCTAAT CACATTTG-GCGAACCGGGTCATG CAG CTTGACCCGGTTCGCATCATTGTG TTTACTGTTGCGGTT 100 27
 C1I96_05485 NONE
 C1I96_05490 NONE
         map NONE
 C1I96_05500 NONE
 C1I96_05505 1234603 .. 1234615 +  -4.8  -2.73159   GTCGTGCTGGCGTCC                CAGC GGTAG GCTG                ATTTAAAAAACTTCC  46 17
        ppk1 1237185 .. 1237207 +  -3.3   -5.5112   CGGAACGTTTTCAAA           TTCGGTTCC GCGCA GGAGCCGTG           TTTTTTCTTCATCCC  88 476
 C1I96_05550 1245657 .. 1245706 +  -5.5  -3.83561   GGCCCGCTTTGGCCA GCACGATGGGGGCGGCGCAGATGG CGG CCACCAGC-TTGCCCGCTTCATGC ATTTTTTTGACCAGA  59 350
 C1I96_05585 NONE
 C1I96_05590 1257624 .. 1257634 +  -2.4  -5.00616   CCTGCTGCCTTGCCG                 CCCG TTA CGGA                 TTTTTTCCGGAAGCG  70 106
         xth 1262653 .. 1262669 +  -5.8  -3.66424   GTCAGCCTGGAGATT              GACTGC TGAGC GCGGTC              TTTCAGATGATTTTC  61 17
 C1I96_05615 1263699 .. 1263720 +  -8.7  -3.29144   AAGATGGAGCCGGAC           GGAAGGGGT GAGC AGCCCTTCC            TTCTCCAGACGCTCC  65 404
 C1I96_05625 1264985 .. 1265016 +  -7.9  -2.84298   TTTCCAGGCTTCATA      TCCGCCGTATCAG CATGGC CTGACGCGGCGGC       TCCTTCTCCCGTCTG  59 3
 C1I96_05630 1266826 .. 1266836 +  -6.8  -4.07885   ATCCGGTGGGGGATG                 CGGA TTT TCCG                 TTTTAAAAACGGCTG  68 9
 C1I96_05635 1268939 .. 1268949 +  -4.6  -3.64831   TAATGCGTGCATTTG                 CGGG AAG TCCG                 TTATATACTTCTTCC  57 43
 C1I96_05640 NONE
 C1I96_05645 1271372 .. 1271384 +  -3.3  -3.41051   TAATTGCTTTTCTTC                CGGAA CGG TGCCG                TTATGCTACGGCTCA  48 87
 C1I96_05650 1272159 .. 1272194 +  -8.2  -2.71364   ATCCGCCTTTGCAGG    CACGCCTGTTCCGCCGC CCC GGGACGG-ACAGGGGTG    TGGTTGAAACACTAC  61 51
 C1I96_05660 1274762 .. 1274780 +  -5.2  -2.53581   CGTCCCGGCAGTGCT             TTTCGCCC GTG GGGCAAAG             TAGCTTCCAGGTCTC  48 4
        galK NONE
 C1I96_05670 1278511 .. 1278534 + -14.6  -4.62069   GTCCCGTATTTTCAA          TCCTCCCGGT TCAG GCCGGGAGGA           TTTTTCACGTCCGGA 100 58
 C1I96_05685 NONE
 C1I96_05690 1283738 .. 1283750 +  -4.7  -2.71011   GAACGGCCAAAATCG                GCTGG AAA CCTGC                TGCTTCCGGCGCCGT  46 42
 C1I96_05695 1284127 .. 1284157 + -17.6  -4.72272   TCCTTTATTACAAAA       GCGGCTTCCCTGTC CAA GGCAAGGAAGCCGC       TTTTTCATGGAAAGC 100 57
 C1I96_05700 NONE
 C1I96_05705 NONE
 C1I96_05710 1286375 .. 1286388 +  -6.7  -3.18264   ATCTGCAAATACCCC               CGGTA CAGG TACCG                TTCGTGGCTGGCGAC  57 485
 C1I96_05735 NONE
 C1I96_05740 NONE
 C1I96_05745 1296752 .. 1296766 +  -6.4  -4.62872   ATACCGGCACAGGCG               CAGTAG CAG CTGCTG               TTTTTGAAGATTCAT  75 263
 C1I96_05760 1298983 .. 1299011 + -11.1  -5.36441   CGAAAAATCGGCGGA        TGAGAGCTGTTCT TGC GGAACAGCTCTTG        TTTTTTATATCCAGA 100 53
 C1I96_05785 1302874 .. 1302884 +  -2.4  -4.27316   CCAGCACGGTATTTT                 CCGG ATT CAGG                 TTTTCCGTTCGCGCC  60 494
 C1I96_05795 1305357 .. 1305388 +  -8.6  -4.77759   CGGCATTACAGAAAA      GAGCAGGACCCCCG GTTT CTGAAGTCCTGCTC       TTTTTGATGCGTTAT  88 496
 C1I96_05805 1306465 .. 1306489 + -12.2  -5.26875   GTAACCATTTGAAAA          CCCTGCAAGT TCATT GCTTGCAGGG          TTTTTTCGTTACGGA 100 34
 C1I96_05810 1306965 .. 1306985 +  -2.6   -5.6473   TAACATGAGAAACGT           CG-CCA-CCA ATG TGGCTGGTCG           TTTTTTTCATGTTGT  85 58
 C1I96_05840 1314004 .. 1314029 + -11.9  -3.33696   GCCTGCGGCATTCTG         TCCGGAGCGGA ACGG TTCGTTCCGGA          TTGATTGCCGGGCCG  82 64
 C1I96_05845 NONE
 C1I96_05850 1320170 .. 1320195 +  -2.6  -4.54727   ATGGAACGGCATGGT         TCC-CTCTTCC CATCC GAAAGAGTGGA         TTTTGGTTTCAGAAG  65 184
 C1I96_05855 NONE
 C1I96_05860 NONE
 C1I96_05865 NONE
 C1I96_05870 NONE
 C1I96_05875 NONE
 C1I96_05880 1323855 .. 1323872 +  -2.5  -5.86061   TCATTTTCAAAATCC             CACACGC GGCG GCGGGCG              TTTTTTTTCGTCCGC  88 80
 C1I96_05925 1330392 .. 1330426 + -17.9  -4.41353   ATTCCGGCATTTACT    CGGCGGAGCGCGGCGC GGGG GCGCC-CGTTCCGCTG     TTTTCCTCTCTCTGC 100 45
 C1I96_05930 1332910 .. 1332928 +    -3  -4.46757   CGTATACATTTCTGA             GCAAAGAC AAG GACATTGC             TTTTCTCCGTGTATT  62 494
 C1I96_05955 1337503 .. 1337538 + -19.9  -2.66748   ATCGAATACATAATT    CAGTGCCCATCGGTT TTCTTT GACCGATGGGCACTG     CTCTCTTTATTGTAG  95 330
 C1I96_06030 NONE
 C1I96_06035 1355266 .. 1355294 +  -4.8  -4.43501   TAATTTTTGATATAT        TATTTATTGTAA TTTTT TAACAATAAATA        TTTTATCGATAAATT  67 118
 C1I96_06040 1356082 .. 1356105 + -14.6  -5.95286   ACAAATTAATCATAG          GACGGTCTCC GCAT GGAGGCCGTC           TTTTTTATTTTTACT 100 57
        bamA NONE
 C1I96_06130 1383822 .. 1383842 +  -5.3  -3.34398   CGGTGATGATTCCCA            TGGAGCCGT GAT GCGGATCCG            TATTTAGCCAAGCCA  54 15
        metF NONE
 C1I96_06140 1385643 .. 1385675 +  -9.3  -3.76373   TGAACGCTTTTTCCA     TCCGCATGT-CTGT TTTTTT ACAGTGCATGCGGA      TTTCCGTATTCAGGA  74 74
 C1I96_06145 1386252 .. 1386265 +  -2.3  -3.59315   GAGCGCCCAGGTCAT               GCGTT GTCT GGCGC                TTTCCGGATCATTGA  48 154
 C1I96_06195 1398315 .. 1398333 +  -8.8  -3.48593   CAGCTCCTGCCCCAG             CTCCACCA TGC TGGGGGAG             TTGTCTACGGCGATC  66 520
 C1I96_06205 NONE
 C1I96_06210 1401530 .. 1401562 + -12.1  -5.79595   GGTTTTCTTTTCCTG     GCCGTTCCGCGCAGG CCTGT CC-G-GCGGAACGGC     TTTTTTGTTTTCCCG 100 50
 C1I96_06220 1404112 .. 1404129 +  -3.5  -2.87468   GTCCATAAATTGTTT             TTTTATC CCAT GATGAAA              TATGCTGTGATCGGA  43 45
 C1I96_06225 1405418 .. 1405439 +  -5.9  -4.58685   TGTGGTGTATTTGAA           CGGG-GGATT GTA AATCCGCCTG           TTTTTAAAAAAGTTT  75 57
 C1I96_06230 1406823 .. 1406833 +  -6.8  -4.81551   TCTTGTAGGCGGGAT                 CGTC AAT GACG                 TTTTTCATCTGCATG  79 288
 C1I96_06240 1410566 .. 1410611 +  -9.6  -3.28712   GCAGGCAGTTCAGCT GGGGTGTGAGGCGGGGCC-CT ACGAC AGAGGCCCCGGCGCACAACGC TTCTGCGGAGGCAAG  68 255
 C1I96_06265 1416048 .. 1416063 +  -2.4  -2.75891   ATGCCTGTATGAAAT              GGTGCG GCAG CGTTCC               TGATTCCATGACTGT  40 7
 C1I96_06270 1417161 .. 1417177 +  -7.9   -4.4448   ACTCCATTCTGACGG              GTGCGCC GCC GGAGCAC              TTTCTTTCACCGTTT  77 265
 C1I96_06280 1417795 .. 1417816 +  -9.5  -5.27477   CAAGGGATGGTTCAT           GAG-GGGATG GGC CATCCCTCTC           TTTTTTGCTTCAGGT 100 62
 C1I96_06295 NONE
 C1I96_06300 1422218 .. 1422258 + -21.3   -4.0825   CTGCATGACCTGGCG  GCAACGCCGCATTCTCGAT CAG GTAGAGGATGCGGCGTTGC  TTATTTGATTACGGA 100 181
 C1I96_06305 1423109 .. 1423123 +  -6.4  -4.78107   TGGGATAACCGGGGC               CGGGAT TTA ATCCTG               TTTTTCGTGGTCGTG  80 118
 C1I96_06345 NONE
        cadA 1432740 .. 1432752 +  -2.7  -4.07568   TTCCGCGTTATTCTG                TGTCT TGG AGATA                TTTTGCAGGAGAGCC  58 230
 C1I96_06385 NONE
         lgt 1444624 .. 1444638 +  -7.1  -3.60234   TGTTTTGGGAATACT               GCTGG CGGGA CCAGC               TTTGAAAATATCTGC  60 64
 C1I96_06400 NONE
 C1I96_06405 1447813 .. 1447829 +  -6.5  -3.86795   AGGCATCATTGAATA              CCCGCTT AAC AAGCTGG              TTTACTAGATTTTTT  66 1
 C1I96_06410 1448039 .. 1448068 + -12.9  -5.51046   ATTTCCGGAAAATTC       CGGCGTCC-TCCTT ATC ACGGAAGGACGCCG       TTTTTTATGTATTTG 100 80
 C1I96_06415 1449627 .. 1449649 +  -3.4   -4.0162   TTTTCTCTGTATTTT           TTATCAGTGG TTG CTGCTGAAAA           TTTATCCTATCAGCG  58 282
 C1I96_06420 1451778 .. 1451792 +  -7.8  -4.07568   CCGTGACGGTGATGA               CGCAGG CGT CCTGTG               TTTTGGCGGCGGCCA  71 464
        ilvD 1455607 .. 1455633 +  -6.6   -3.7282   AGGGTGCGGCGCCCG        CG-CGCTTCCC CGAAGA GGGAAGTGACG         TTCTTCATCGCGTCG  63 263
 C1I96_06445 1456453 .. 1456483 + -17.2  -3.36749   TCTAATAAATAGAAA       GAGTGAAAGTAATT GCA AATTACTTTCACTC       TTAGTATTCAGACTA 100 246
 C1I96_06475 1464421 .. 1464432 +    -3  -2.52516   AGGCTTTTTCTCTAA                TCTT GACA AAGA                 ATTAATAGTAAAGGC  39 522
 C1I96_06505 1473802 .. 1473812 +  -3.2  -4.85599   TCCCTGGGCAGGAAG                 TAGC CGC GCTG                 TTTTTCTGAGATGGG  73 346
 C1I96_06515 1476124 .. 1476139 +    -4  -3.61894   CTGTCATATTTCCGG              TAGCGA TGAT TCGTTA               TTATTGGGGGAGGTT  55 124
 C1I96_06520 1478363 .. 1478383 +  -9.7  -3.53811   GCTTGTATAATTGCC            GGAAACCAG AAT CTGGTCTCC            TTTGAAGGAGATGGC  70 373
 C1I96_06530 1481868 .. 1481899 + -14.5  -5.31275   ACTAAAAATAGTCAT      GGCTTCCAGTCCT TTCGTT AGGGCTGGGAGCC       TTTTTTATCCTGGAC 100 75
        rsmA NONE
 C1I96_06565 1490856 .. 1490867 +  -3.6  -2.96031   CTGGAAGCAGGAACT                TGCC GGGT GGCG                 GTTATTTCCAATAAA  45 72
 C1I96_06570 1491305 .. 1491316 +    -3  -4.36914   ATTCATAATCCTTTC                TTTC ACTT GAAA                 TTTTATGGCAAAAAA  62 66
 C1I96_06590 1495958 .. 1496000 + -11.3   -4.5477   TCCTTTCGGGCGCAC CAAACAAGGCCCTGCAAGT TAACT GCTTGCAGGGCCTTACTGG TTTTATGATGTATTC 100 24
 C1I96_06610 NONE
 C1I96_06615 1499944 .. 1499981 + -25.1   -4.7261   AGACCCTCCCCATGA   GCGGCTAGCTGGATGAA CTTA TTCGTCCAGCTAGCCGC    TTTCTTTTGATAAAT 100 57
 C1I96_06620 NONE
 C1I96_06625 NONE
 C1I96_06630 NONE
 C1I96_06635 NONE
 C1I96_06640 1505075 .. 1505093 +  -8.8  -3.49048   AGTCCGTGTCCTGAC             GGGCATGG TCT CCATTCCC             TGTTCTTCCTTCCCC  69 27
 C1I96_06645 1511293 .. 1511304 +  -2.2   -4.6265   TGCGAACCATTGCTC                GGAG GCAC TTCC                 TTTTCTGATTCTTAT  63 281
 C1I96_06650 1511792 .. 1511822 + -22.8  -4.57569   GCGATTATTTATTTA       TCATCCGGCATGCA ATC TGCATGCCGGATGA       TTTTTAGGGCAATAA 100 140
 C1I96_06655 1513072 .. 1513089 +  -5.7  -2.75064   ATATATTAGCGATAT             TTATGAT TTAG ATCATAA              TAGTTGGCTGCAAAC  52 287
 C1I96_06660 1513659 .. 1513685 +  -8.7  -5.75538   ATAATTAAATTCAAA         CCTCTCCTGTC CTAGT GGTGGGAGAGG         TTTTTATTTTTTGAA 100 145
 C1I96_06665 1516835 .. 1516869 + -13.8  -5.14965   ATTTTCTACGAATTA    CAACCACTCAG-GGA CTGTTA TCCTCTGAGTGGTTG     TTTTTTAATAAGCAT 100 343
 C1I96_06670 NONE
 C1I96_06675 1518627 .. 1518653 + -12.4  -5.48303   TATTTTTATTAAAAA         CTCCTTCCAAAA TCA TATTGGAAGGAG         TTTTTTTGAAATTAT 100 104
 C1I96_06680 1520043 .. 1520060 +  -3.5  -3.34398   CTTTGAGGTGTATCA             CTTTTTT AGAT AAAGAAG              TATTTGAAAAAGCGC  48 135
 C1I96_06685 1520454 .. 1520476 +    -2  -2.78679   TGTGGGAATCGGCTA           TTCTGACG CCACGCC TGTCAGAG           CTTTACATACAACCA  40 20
 C1I96_06690 1521176 .. 1521192 +  -5.2  -3.57651   TATATTTTTTTTGAA              TGCAAA AATGG TTTGCA              TTATATGCTGTCCAA  56 354
 C1I96_06700 1522774 .. 1522798 +  -6.4  -5.09895   TTTAATTTTATAAAA          GCTCCTTCTG TTTAT CGGAAGGAAC          TTTTTTACATAAATG  87 84
 C1I96_06705 1524134 .. 1524144 +  -5.4  -3.02371   TCTCTTTTTTGTATG                 TCCA GTG TGGA                 TGATTATTTCAGCAA  51 506
 C1I96_06710 NONE
 C1I96_06715 1525216 .. 1525241 + -12.6  -4.96848   TGTATGGGATTCAAG         CTGCATCCGG TATGTT CCGGGTGCAG          TTTTTGTGTAAACGG 100 268
        kdpF NONE
 C1I96_06725 NONE
        kdpB 1529569 .. 1529579 +  -4.6  -4.37763   CAAACTGATTGATAT                 GGTC GTC GGCC                 TGTTTTTTTAACTGA  67 4
 C1I96_06735 1530265 .. 1530304 +   -13  -3.81137   CTTGAAAAAATGAAA  TCGATTGCGGGC-TTCACG TCA TGGGAACGCCCGCAATTGA  TTTACATCTTTAAAG  93 96
 C1I96_06740 1531659 .. 1531669 +  -2.4  -5.55855   TTACCATTCCCGGGC                 GGTG CGG CCCC                 TTTTATTTTTTTCCG  83 184
 C1I96_06750 1532918 .. 1532939 +  -2.3  -2.77344   ATTCCGGCCGAATTG           GTAGATTTCC CTA GGGAA-CTGC           ATTCTTGAAAAGTGA  40 104
 C1I96_06755 1533227 .. 1533253 + -17.3  -4.14739   CGCCGCCATCTTATC         TGCTGCCGGGC CTGCA GCCCGGCAGCG         TTTTCCCATCAATAA 100 42
 C1I96_06760 NONE
 C1I96_06765 NONE
 C1I96_06770 1537258 .. 1537276 +    -6  -4.64861   GCAGGCGGAGTGTCA             GATGCGTT CCT GATGCATC             TTTGTTTTCCGAGCC  75 146
 C1I96_06775 1538868 .. 1538908 +  -2.6  -5.15969   TATGCCTCGCAGCAC  TGGCCGATATACTCCA TTTTGATTT TGGAGTATTTCAGGCA  TTTTTTCAGTTCCCG  75 338
 C1I96_06790 1540495 .. 1540511 +  -6.5  -2.81966   CGTACGGGAATTGAT              GGCGG ATATCGC CCGCC              TGTGCTGAAATTTCC  54 1
 C1I96_06795 1542394 .. 1542414 +  -6.8  -4.29738   GATATTTCCGGCATG            CGTTCCGC CAGGC GCGGGATG            TTTTCCTCACTGTAG  71 475
 C1I96_06835 1553962 .. 1553983 +  -5.1  -3.04517   GGCGTGCCGCTGCCC           TCTCCGG TCCGTGTT CCGGAGG            CTTTTCCGACGGACT  51 307
 C1I96_06840 1555129 .. 1555144 +  -2.6  -3.88766   TGTTCTAACATTTTT              GGTATGT CCG AC-TACC              TTTCCTCTCTGGGCT  54 101
 C1I96_06845 1555964 .. 1555997 +  -5.1  -4.43477   CAGCATGTTTTCAAA     GGCCTTGGCGCGGAG CATG TTCGGTCCCATGGCC      TTTTCCTTCAATGCC  70 174
 C1I96_06855 NONE
 C1I96_06860 NONE
 C1I96_06865 1558859 .. 1558887 + -16.3  -3.33696   ATGGATATGTTGGCA        TTCATCCAAACAT TGG ATGTTTGGATGAA        TTACTTAAAGAAGGA 100 60
 C1I96_06870 1559908 .. 1559946 + -20.3  -3.03903   TTCTTTTATCTGGAA   CGCGTGCCGTTCCGCCG GAATG CGGCGGAACGGCACGGA   TATTCCCGGGCTTTT 100 44
 C1I96_06875 1560776 .. 1560786 +  -2.6  -4.72272   GGCGTCTCTGGACCG                 TTAT CCG ATAA                 TTTTTCATGAAGCAG  68 15
 C1I96_06880 1561500 .. 1561527 +  -3.4  -6.09196   TTAAATTAACGGAAC        AGGCGATTCC-CA TCA TGCGGAATCGGCA        TTTTTTTCTTTTCGG 100 37
 C1I96_06885 1563552 .. 1563585 +  -8.2  -3.06515   CGCGTGACCCTTCCG     AGGGAGCTGGAA GGGGCGAAGG TTCCAGCTCCCC      ATTTTGAAAATGACA  63 34
 C1I96_06890 1564541 .. 1564553 +  -5.5  -3.53012   CAAAGTCATGGAACG                CCGGA GGA TCTGG                TTTGCGGAAACGAAG  56 64
 C1I96_06895 1566189 .. 1566203 +  -2.7  -3.32997   CGGAGAATGTGCTCT               CCGGG AAGGG CCAGG               TTGCCTTTATCCCGG  46 184
 C1I96_06910 1568204 .. 1568244 +  -8.4  -3.36273   CGGCATGCCGGAACG GGGCCTTGATTCCGT-CCCG TTC CGGGTATGGAAT-GAGGCGC TTACTATTAAAACCA  66 134
 C1I96_06915 1569525 .. 1569553 + -16.7  -3.53855   TTTGGACAGACTGCC        CAGGTCGCGGTGT CTT GCGCCGCGGCCTG        TATATTTTTACCGGG 100 50
 C1I96_06920 NONE
 C1I96_06925 1572756 .. 1572785 + -20.1  -3.29461   TATTTGTAATAAAAA       GAACCGCTCCGGG AATC TCCGGAGCGGTTC        TTATAAAAGAGATTG 100 265
 C1I96_06945 1575015 .. 1575046 + -12.4  -2.71681   CGCTTTCCCGTACTG      CGGAATGCTGGAAG GACG TTTTCAGCGTTCCG       TGGTTAGGGGAGTTG  78 62
        ispE 1580266 .. 1580302 +  -2.2  -2.74782   GCAGGAGGCCTTGCC   TTGACGGAGGGGGA-GG CATG CCGTTACACTCCGTCCA    TGATTAAGAGTTTGT  40 53
 C1I96_06975 NONE
 C1I96_06980 1582892 .. 1582904 +  -7.7  -3.14468   TTTTTCAGAATGCTC                CGGAA TTG TTCCG                TTGCCTCTCCTGCCG  62 44
 C1I96_07000 1586357 .. 1586377 +    -9  -2.54896   ATGTTGATGGAAACG           GC-CCTGCC GTCC GGCAGGAGC            TGCATTCCCTGGACA  58 253
        purH 1590865 .. 1590875 +  -2.4  -3.80516   GCCATGGTATTTACG                 GGGC ACC GCCA                 TTTCCTCCATTAATT  52 2
 C1I96_07030 NONE
        acpS 1592379 .. 1592396 +  -7.7  -2.57931   GATAGAAACGGTTGC             GGTGCTG GCAG CAGTACC              ATTATCAAGAGTAAC  53 315
 C1I96_07050 NONE
 C1I96_07055 1598061 .. 1598073 +  -7.7  -3.28791   GTTTTTCTGCCGTTT                GCTGA CGG TCAGC                TTGTAAGAGGCGCAT  64 45
 C1I96_07060 1598654 .. 1598683 + -16.5  -5.00616   AAGACCTTTGACTGG       TAAGGCCGCCTCC TGAA GAAGGCGGCCTTA        TTTTTTAAGGAAGGG 100 57
 C1I96_07080 1605031 .. 1605045 +   -10  -5.00895   AGAACAAAGCGGATG               GTTCCG GCC CGGAAC               TTTTTGTCTGATGCC 100 351
 C1I96_07095 1607402 .. 1607419 +  -2.7  -3.73072   GAAGCATGGCGCAAA             TGAAATC GCAA GATTCCA              TTTGGTCCAGCAATT  51 177
 C1I96_07100 1609081 .. 1609101 +  -2.4  -2.75708   CGCCTGGAGCGAAGC            CCGGCACG ACGTG CGTGACGA            CCTTTTTTCACCGAG  40 141
 C1I96_07105 NONE
 C1I96_07110 1609358 .. 1609377 + -10.8  -2.71924   GCGTGGCAAAGAAAA            CGATTGCT GAGA AGCAATCG             CTTTCCAACAAAGTG  72 80
 C1I96_07115 1612372 .. 1612388 +  -2.3  -2.95942   CTCCCCGTCGTGAAT              GACAA CTTGCTC TTGTC              TCATTTACCTGTGCA  42 50
         rrf 1612710 .. 1612749 + -16.4  -4.72497   GCCGGGATTTTTTTC  CATCAGGCCCCGCCAGTC CCTC GACTCGCGGGGCCTGTTC   TTTTCTTGCTCGGTC 100 34
 C1I96_07125 1615507 .. 1615530 + -14.6  -3.34344   CGCCGAAAAAAGGAA          GAAGGGGGGG ATTT CCCCCCTTTC           TTCCTTGAAAGATGG  93 130
        pyrF 1619216 .. 1619235 +  -4.3  -3.28712   AAATGATAACGGCCT            GCTTATG GCTGTG CATGAGC             TTGTCAAAGGGAGGG  50 68
 C1I96_07145 NONE
 C1I96_07150 1621833 .. 1621843 +  -8.2  -2.62735   TTTCCTGAGGAGGAA                 CGGC GTT GCCG                 TGCTGTAAGGGGTAT  61 75
 C1I96_07170 NONE
 C1I96_07175 1627335 .. 1627374 +   -13  -4.56775   TTGCCACGTATTTTC  CTTGAACCCCGTTGTGTC GTCC GGCATAATGGGGTTCAAC   TTTTTAAAAGGAAAT 100 45
 C1I96_07180 1627780 .. 1627799 +  -7.8  -5.42198   CGCCAGTTTTTTTAA            GCCCCG TGGGATGT CGGGGC             TTTTATTTTTTGACA  95 36
 C1I96_07200 NONE
 C1I96_07205 1631820 .. 1631843 + -14.6   -5.4505   TTCTTTCTCGGAAAA          GGAGCGCTCC CTGT GGAGTGCTCC           TTTTTTGTTGCAGAA 100 75
 C1I96_07220 NONE
 C1I96_07225 1635396 .. 1635408 +  -3.4  -3.14792   GTTTCCAATTCCCAG                GCTT CATGA AAGC                GTTCTTTTCCATTAA  46 17
 C1I96_07230 NONE
 C1I96_07235 NONE
 C1I96_07240 NONE
 C1I96_07245 1640957 .. 1640994 +  -6.3  -3.32997   GCGGCTATTCTGATG   CCGGAGGATTTGGCCATG CCG TAAGGC-GAATGCTCCGG   TTCCGTTTCTGGAAG  59 2
 C1I96_07295 1659762 .. 1659791 + -14.9  -5.14965   TTGTTTGGGGTAAGG       CAGGGGCCTCCGC GGGT GCGGAGGCCCCCA        TTTTTTGATAGGCCT 100 64
 C1I96_07330 1666551 .. 1666561 +  -2.4  -3.05844   AGAAGGCCGGGAATC                 CCGG GTT CAGG                 TATTCCGGTGACGGC  42 114
 C1I96_07335 1668115 .. 1668125 +  -5.4  -4.08945   TATGGCTGATATTGC                 GTTC AAG GAAC                 TTTTGAAGAAGTAGT  64 1
 C1I96_07340 1669706 .. 1669738 + -17.1  -5.79588   GAGCCTCCTGTTTAT      CCGCGGAAGGGCATT ATT GATGTTCTTCCGCGG      TTTTTTTCCTTTTGC 100 41
 C1I96_07400 1680721 .. 1680746 + -11.1  -4.58395   TTCCGAATCAGAAGA         GCCGTTCCGCA TTTT TGGGGGACGGC          TTTTTGAAAAATGCA 100 188
 C1I96_07450 1691679 .. 1691698 + -10.7  -3.28712   CCTGATTCTCCTTCT            GGCCGGA AAGCAA TCCGGCC             TTCTGCCGGGAGAGG  78 41
 C1I96_07455 1692658 .. 1692681 + -18.2  -5.71295   AATAGTTCAAGCCAG          GGCCGTTCCC GGGA GGGAACGGCC           TTTTTGTTTTTGTCT 100 47
 C1I96_07465 NONE
 C1I96_07470 1702045 .. 1702079 + -24.5  -3.14132   TTCCTCCGGGTCCTC     CAGAGCCGTTCCGGA ACAAC TCCGGAACGGCTCTG     TTGCTCAAAGAAAAC 100 78
        gyrB NONE
 C1I96_07480 1707527 .. 1707561 + -12.8  -3.16323   AGAATAATATTCAGG     TTTTCCTGCTCCGGCG TCA TGCCGGAGCAGGGGGC     TTCATGGGCCGTTTT  84 34
 C1I96_07485 NONE
 C1I96_07490 1709572 .. 1709594 + -11.2  -3.27525   AATTTTTCCGTTTCC           TGCCCGGCTG GGC CGGCTGGGCG           TTCGGTTTCAGCCGG  78 112
 C1I96_07495 NONE
 C1I96_07500 NONE
 C1I96_07505 1716307 .. 1716323 +  -4.3  -3.93695   GTTAATGGAGCCGGA              GAGGCAG CCT TTGCCCC              TTTGTAAATCCTGCC  57 2
 C1I96_07510 1716987 .. 1717019 + -13.3  -3.71907   GGTAGCAAGATTTAC      CCCGGAGGCGTCCGC GGC GAGAACGGCTCCGGG      TGTTTATGCTTTTTA  93 219
        pstB 1734016 .. 1734029 +  -3.7  -2.60813   TTCCAAAGGAGGAGC               CGGGC GTGT GCCCC                ATGTTTCCGGCACTG  42 74
 C1I96_07590 1734833 .. 1734849 +  -5.8  -4.36592   GGAAGAACGGCGGGG              GGCGTT GTTGA AGCGCC              TGTTTTTTGTTCGGA  72 58
 C1I96_07610 1739634 .. 1739673 +  -5.8  -5.60993   CTCCTTGTCCTGCTG  CCTGTTTTT-CCGGCTTTT TCC AAATGCCGGCAGGAAAAGG  TTTTTTTGTGGAAGG 100 150
 C1I96_07615 NONE
 C1I96_07620 NONE
 C1I96_07625 1742101 .. 1742113 +  -3.3  -4.00476   CCAGTTTTTCCCAGT                AGCAG CGG CTGCC                TTTCTGGTAAATTTC  56 236
 C1I96_07645 NONE
 C1I96_07650 1745113 .. 1745127 +  -4.2   -4.3208   CTTGATTTGGGCGGT               TTCACC GAT GGTGAC               TTTTCCCTTGTCGGA  65 205
 C1I96_07680 1750324 .. 1750335 +  -2.2  -3.55071   GCGCGGAAAGGACTG                CGCGG ATG CC-CG                TTTCCCGCAGTCTGC  47 41
 C1I96_07685 NONE
 C1I96_07690 1752667 .. 1752685 +  -8.8  -3.06183   GGCAGTGGTACAATC             CGCGGTAG GCG CTGCTGCG             TTCAATGGGGATGAC  63 483
 C1I96_07720 1758245 .. 1758259 + -11.4  -2.65894   CGAGGAAAGGAATAA               TCCCCG TGA CGGGGA               ATTCTCCGTCTTGTC  75 26
 C1I96_07725 1759706 .. 1759732 + -13.8  -5.72254   CCTGTTTCCATTCAG         CTCCCTTCCG CGGTTAA CGGAAGGGAG         TTTTTTATTATTTCC 100 56
 C1I96_07755 NONE
        pssA 1769070 .. 1769100 +  -7.4  -5.00616   GGCGGTGTTTCCGCG       GCCCGGTTCCGGGA ATG TCCCTGGGTCCGGC       TTTTTTAAGGGCGGG  85 110
        folP NONE
 C1I96_07775 1773349 .. 1773359 +  -2.4  -4.32046   GGAACAATATCCGCG                 GGGC GTA GCCG                 TTTCCTTTTTGCCGG  61 100
        ispG NONE
 C1I96_07785 1776102 .. 1776113 +  -4.4   -5.4833   GGAAACCGGATATCC                CTGA ACCG TCAG                 TTTTTTCTTAAATCA  83 241
 C1I96_07790 1777394 .. 1777410 +  -3.5  -5.27938   AGGGAATGCCCTGTT              CCGGCGG TTC CGGGCGG              TTTTTGTTTGGAGCT  79 46
 C1I96_07800 NONE
 C1I96_07805 1781410 .. 1781421 +  -4.4  -4.18197   GGGAAAGAATGAAGG                TTCC CAAA GGAA                 TTTTCACTGAACCCT  62 238
 C1I96_07810 1781931 .. 1781958 +  -4.8  -2.50113   TTTTTAGGAAGATCG        GCGATGAATGGC GGGC GCTCTTCATGGC         GTTCATGCCGTGATA  46 51
 C1I96_07815 1782580 .. 1782590 +  -2.4    -3.794   AAGGAGAGGGGAATG                 CGGC GCT GGCG                 TTTCATGCCTTAGGA  52 294
 C1I96_07820 NONE
 C1I96_07825 1784037 .. 1784047 +  -2.4  -5.19251   TCTGCGGAGAGTTCC                 CCGC TGA GCAG                 TTTTTGTTCGTCTTC  79 417
 C1I96_07840 1787216 .. 1787228 +  -4.1  -2.87294   ACGGATGAGTTTTTT                TTCTC TTT GGGAA                TCTAATATCAGTATT  45 114
        hypB NONE
        hypF NONE
        hypC NONE
 C1I96_07860 NONE
        hypE 1793164 .. 1793180 +  -6.5  -5.40072   ATTTTCTGGTGTATT              CATCCGC CAG GCGCATG              TTTTTTTCCACGCCG  91 510
 C1I96_07885 1799066 .. 1799108 + -15.7   -3.0792   ATAAATAAGCAACCC TCTTCCCGCCGGAGTGGGAA GCAA TTCCCCCTCCGGC-GGAACA TTACATCCCGTATTA 100 33
 C1I96_07890 NONE
        groL 1801183 .. 1801207 + -18.6   -5.2422   GGCAATCGGCTTCAA          GGCTCCCCGG TTTTT CCGGGGAGCC          TTTTTTAATATGCTT 100 66
 C1I96_07900 1801801 .. 1801830 + -20.1  -5.00616   CATTTAATGAAAGCG       GGAGGAGGGCGGA TGAA TCCGCTCTCCTCC        TTTTTTGAGGACCGG 100 56
 C1I96_07905 1804191 .. 1804226 + -20.4  -3.02263   TCTCCCTGTAATTCA    CGTCCGTGCCGGAAGC ATTC GCCGCCGGCACGGACG     TATTGCCCGGACTGT 100 43
 C1I96_07915 NONE
 C1I96_07920 NONE
 C1I96_07925 1806696 .. 1806733 + -17.3   -5.1244   CCATTAATGCCTTTA   CTCCTCTAATTGCGAAT TTTC ATTCACAATTAGAGGAG    TTTTTATCTTACTGC 100 52
 C1I96_07930 NONE
 C1I96_07935 1809602 .. 1809626 + -13.6   -5.4505   GGCATTTTTCCCATA          CCCGGCTTTC CGCAA GGAAGCCGGG          TTTTTTATTGGGCCG 100 41
 C1I96_07940 1810712 .. 1810728 +  -2.1  -4.74103   AAAAGATGACGGAAG              CGGTTCC GGA GGATGCG              TTTTTAGCTTGCGCG  67 32
 C1I96_07945 1811416 .. 1811445 + -13.7  -3.34715   TTTTGATTTTCATGA       GGGAACATGTCCGC TTG GCGGA-GTGTTCCC       TGTTTGCGGAAGCTG  91 77
         gap 1812728 .. 1812749 + -15.9   -5.5604   GGCGGGGATTTATCC           GGGAGGGCA GAAA TGCCCTCCC            TTTTTTATTCATTGA 100 136
         pgk 1814052 .. 1814079 +   -17  -5.37593   AATGGGCTTTTTTAT        TCCCTGCGCCCG TTTT CGGGTGCGGGGA         TTTTTTGATTTGCCG 100 81
 C1I96_07960 1815251 .. 1815290 + -15.8  -3.53012   TTTTTCGAGACGGGC  GGTGTAGCGGCGGATGAAC ATG GTTT-TCCGCCGCTCCGCC  TTTGAAGAGGGAAGA 100 53
 C1I96_07970 1816938 .. 1816965 + -15.5  -4.40804   CTAACATTTTTTATC        CTGGCCGCGGC GTGAAA GCCGCGGCCTG         TTTTGTGCCATCATG 100 42
 C1I96_07975 1817811 .. 1817825 +  -2.1  -3.87994   ACGATTTTTCAAAAT              TGACCC TTAC GGG-CA               TTTATGGGCGTAACT  52 131
 C1I96_07980 1818720 .. 1818740 +  -4.7  -4.73108   TTTCCACCATGGAGA            TGTTGGCAT GGG ATGCCAGGA            TTTTGATTTTGTGGG  74 302
 C1I96_08005 1828084 .. 1828094 +  -2.4  -3.68658   CAGGTCTCCAGAAGG                 GCGG AAG CCGA                 ATTTTTTAATCAGGT  48 480
 C1I96_08015 1829799 .. 1829815 +  -2.2  -4.15044   CCACCTGTTGTATCC             GCAGGGG GTTG CTCC-GC              TTTATTGACCGGGCG  57 1
 C1I96_08030 1832175 .. 1832187 +  -3.3  -2.75064   GAGCGGTATTCTGGC                GCAGG CTT CCTCC                TGATTGGCTGGGCGG  43 10
 C1I96_08035 NONE
 C1I96_08040 1832519 .. 1832542 +    -6  -5.42198   CCGACCATTTTAAAG          CCTGTGGATC AAAT GATTTACGGG           TTTTGTTTTTTGAGC  90 34
 C1I96_08050 1834017 .. 1834028 +  -7.2  -3.08344   TATCTTTTGATTGAC                CGCG TGCG CGCG                 TATGTATACTTTCCG  59 54
 C1I96_08055 1835060 .. 1835090 + -17.6   -4.2349   CGAATACATGACAAA       GGCCTCCGGTGCGT TGA ATGTGCCGGAGGCC       TTTTACATATGGGGA 100 58
 C1I96_08065 1837652 .. 1837679 + -19.2  -5.39721   TGATTTGCTCTTGCG        CCGGGTTTCCCG TTTT CGGGAAGCCCGG         TTTTTTATGTCCTGA 100 44
 C1I96_08070 NONE
 C1I96_08075 NONE
 C1I96_08080 1844362 .. 1844374 +  -4.1  -4.58283   TGCGAGGTTTTTCCC                GGAAG CTT TTTCC                TTTTTCAGAGGATTC  69 64
 C1I96_08090 1845610 .. 1845627 +  -9.1  -3.12142   AATGCACCGGACCAG             CGCCAGGG GGC CCC-GGCG             TGTATTCCATGTCCG  63 320
 C1I96_08105 1848374 .. 1848397 + -16.8  -3.83026   GCCGCCGTGTTCAAA          GCCTTTGCCG GAAA CGGCAAAGGC           TTTGCTGTAGGAAGG 100 69
 C1I96_08110 NONE
 C1I96_08115 1849653 .. 1849676 +  -5.3  -4.13767   GGATTCATGACTAGG         GC-GCGCA-CG ATGG CGATGCGCTGC          TTTTGGCCTCCGGAA  64 429
 C1I96_08135 1853308 .. 1853324 +  -3.7  -3.10612   AAGACACTTTCAAGA              CGATGAA TGA TTCATCC              TATATTCCGGTTGAC  46 57
 C1I96_08140 NONE
 C1I96_08145 1855260 .. 1855273 +  -3.7  -5.08601   AAGCCAGATGGCGCA               GGGCG CTGG CGGCC                TTTTTGTTGCCGTGC  79 210
 C1I96_08175 1863049 .. 1863062 +  -5.2  -2.74144   AAACGGCCTGCCCTG               CCGC AGGTAC GCGG                ATTTCGCCATGCAGG  47 378
        hisA NONE
 C1I96_08190 1864406 .. 1864423 +  -2.5  -3.59305   CCGGAGCTTAGGAAA             GCCGGGC GGAA GGCAGGC              ATTTTCTTTATGCGT  47 30
        grpE NONE
        dnaJ NONE
 C1I96_08205 NONE
 C1I96_08210 1868354 .. 1868365 +  -7.2  -4.36914   CTTCCACCAGGATGG                CGGG CATG CCCG                 TTTTCTCAAACCGGC  77 334
 C1I96_08240 1874962 .. 1874979 +  -7.7  -3.20723   TTCCGGACTGAACTG             CCGG-AGC CGT GCTACCGG             TTCAGTTCATCCCAC  62 30
 C1I96_08255 NONE
 C1I96_08260 1878442 .. 1878469 +   -17  -5.93809   TTCTTCTTTTACCGG        GTCCGGAGCCGT TTTT GCGGCTCCGGGC         TTTTTTTTGTCGCCA 100 56
 C1I96_08265 1879874 .. 1879891 +  -2.5  -3.51411   TGATTCCATCCTGCC             CGTCAGG CTTT CCGGCCG              TTGATTTCGCGCAAT  47 120
 C1I96_08270 NONE
 C1I96_08275 1881606 .. 1881631 +  -5.4  -4.72272   GTACATAAGAAAAAA         GAACCGC-CCC TTCAC GGGAGCAGTTC         TTTTTGGTGAAAAGC  75 365
 C1I96_08300 NONE
 C1I96_08305 1886447 .. 1886476 +  -9.3  -5.00616   GTTTTGATTGCCTTT       CAACCGTATCCTG GAAT CAGGATACGGTCA        TTTTTTGCGGAAGCA 100 84
 C1I96_08330 NONE
 C1I96_08335 NONE
 C1I96_08340 1894011 .. 1894035 +  -5.7  -3.67611   TCCGGGATGGAGGCT          CCGGTTCCGAG ACA TTTGGAATTGG          TTCTCTTCCCGTGCC  61 102
 C1I96_08350 1897367 .. 1897384 +  -3.3  -4.56597   CCGGGAAAGGCAGGG             GGCAGGC TGTG GCTTGCG              TTTTTCCAGCAGCCG  67 81
 C1I96_08380 1901291 .. 1901301 +  -4.6  -3.33744   GACCGCAGGCGGTCC                 GGGG CGG CTCC                 CTTTTTCCGGAGGGA  52 183
 C1I96_08395 1904068 .. 1904079 +  -2.2   -2.8315   CCGGTTCCCGTTCCA                TTCC CCGC GGAG                 CTTTCGGATTATTCT  40 45
 C1I96_08400 1905186 .. 1905209 + -16.8  -3.84278   TCCTTTTCCTTTCAA          CCCGGTTTCC CTGT GGAAACCGGG           TTATTCATTGCCTTT 100 54
 C1I96_08405 1907813 .. 1907847 + -22.2  -4.15044   TGAGCCGTTAAATCT     CTGACCGGGGAAGGCG GAA TGCCTTCCCCGGTCTG     TTTCTTGGAAAGAGA 100 51
 C1I96_08425 NONE
 C1I96_08430 1913539 .. 1913570 +   -18  -5.45652   ACATCCTGTTAATAC      CCCGCTCCGGCCTT TTGT GAGGCCGGAGCGGA       TTTTTTATTGGCAAT 100 55
        fabD 1914605 .. 1914630 +   -14  -5.46657   ATAAAAGGGGGTAAG         CCGCCGGC-CC GTTGG GGAGCCGGCGG         TTTTTTGTTGGCGTG 100 50
 C1I96_08445 1915262 .. 1915283 + -11.6  -3.57144   GGTTTGACGGGGAGG           CCGTCGTC GCGGCA GACGACGG            TTTGAAAATAGGGCA  77 239
 C1I96_08460 NONE
 C1I96_08465 NONE
 C1I96_08470 NONE
 C1I96_08475 1922892 .. 1922915 +    -3  -3.31322   GTTCCGGAACAGGGG          GGGAG-GAGGC GTT GCCGCACTCGC          TTCTGGACGGTTCCG  47 45
 C1I96_08480 1924655 .. 1924672 +  -5.5  -4.07568   GCAGTCCCAGGGCGA             TGCCTCT GGGC AGCGGCA              TTTTGCGGGCGACCC  64 473
 C1I96_08495 1928116 .. 1928141 +    -4  -4.63218   GGCGGAAGCAGGGAT         TTCCG-CATGG CGATT CCTTGCCGGAA         TTTTGTTGGACAGGA  69 197
 C1I96_08505 NONE
 C1I96_08510 1929784 .. 1929802 +  -2.3  -3.48593   TACGCGCAATCTCGC             TTTCCGC CGTTA GCGGGCA             TTATCTGAAGACCTC  47 13
 C1I96_08515 1930923 .. 1930936 +  -5.2  -3.52689   GGGAAACCGGGGAGG               GCGG AATCGG CCGC                TGTTGCTTTTTGTCT  56 51
 C1I96_08520 1931712 .. 1931726 +  -2.8  -3.03811   GTACGGCATGGGCGT               CCGT CTCAATC ACGG               TAATTTCCCTTTTTC  43 8
 C1I96_08525 1932789 .. 1932799 +  -2.4  -5.46657   GTGAATTTTCTCGTT                 CCGG ACA CAGG                 TTTTTTCTTGGAGTA  79 80
 C1I96_08530 1935123 .. 1935151 + -21.1  -5.64274   TTCACGGAAAACGGA        GGGAGTCCCGCTG TTC TAGCGGGACTCCC        TTTTTTTCTGGCTGA 100 54
 C1I96_08535 NONE
 C1I96_08540 1937756 .. 1937785 + -11.6  -6.09196   ACCATTTTTCAAGAA       CTGCTTTGATTC CTCCGA GAGTCAAAGCAG        TTTTTTTATTTTCAA 100 498
 C1I96_08545 NONE
        trpD NONE
 C1I96_08555 NONE
 C1I96_08560 NONE
        trpB NONE
 C1I96_08570 1944220 .. 1944247 +   -20  -5.58522   GCGGCTTTTAAGGAT        GGGCCTGCACAA CTTA TTGTGCAGGCCC         TTTTTATTTTATCTG 100 56
 C1I96_08575 NONE
 C1I96_08580 1954055 .. 1954080 + -20.5   -5.1675   TCAGCCAATTGGAAA         GCCGCTGCGGA ATCA TCCGCAGCGGC          TTTTTTCATGAATGG 100 52
 C1I96_08600 1958569 .. 1958595 +  -5.7  -3.76759   AAGAGGGACTCTCAT         CCGGAAGAGGG GGATG CCTGCGTCCGG         TTTGCTGCGGTTGGT  61 208
 C1I96_08625 NONE
 C1I96_08630 1967655 .. 1967665 +  -2.4   -4.3534   CCATGAGGGGAGTCT                 CTCC GGC GGCG                 TTTTGATGGTTGACG  60 275
 C1I96_08640 1970222 .. 1970241 +  -5.7  -3.97947   AGGGGATTCCTGTAC            GCTTTCC GTGAGG GGAGAGC             TTTCTGATGGCTGGG  66 280
 C1I96_08645 1970989 .. 1971014 + -15.5  -5.36441   GTTCCCTTTTACCAA         CGCCGTGTTCC ATGA GGAATACGGCG          TTTTTTATGTGAAAG 100 49
 C1I96_08650 1972712 .. 1972724 +  -3.4  -3.71255   TTGTCTGCCGGTAAA                GGAT GGAAA ATCC                TTGTTAGCTGATTCT  53 391
 C1I96_08665 1975807 .. 1975822 +  -4.8  -3.99324   CTTTGTTCCAGTCTT              TTCTTA TATA TAAGAA               TTTCTCATGATAAGC  62 276
        rpmI 1976295 .. 1976312 +  -6.9  -3.53811   CTAAACCGCGGAAAC             GCTCGAC TAAT GCCGAGC              TTTCCCCCCGCTGAA  61 37
 C1I96_08675 1976857 .. 1976886 + -20.9   -4.3467   GTAAACGTTAACCGA       CAGCCTCCGGAAA TAAT TTTCCGGAGGCTG        TTTTCATGTCCGGAT 100 66
        rseP 1978866 .. 1978891 +  -5.4  -3.73995   GCCCCGGTATTCAAG         GCCGTCGCGGA TTAGT TGCG-GACGGC         GTTTTTTATCCCGGC  59 11
 C1I96_08685 1980282 .. 1980303 +  -4.3  -4.31835   GAAAGCATCCGGGTG           GCTGTTCCG GAAC CGTGACGGC            TTTATTCTGGCCGTT  65 8
 C1I96_08690 1981370 .. 1981394 + -10.7  -5.95539   CCTTTGTTATCAACG          CCGCTCCGT AATTCAC GCGGAGCGG          TTTTTTTATTTGGCG 100 54
 C1I96_08720 1997392 .. 1997407 +  -4.6  -2.84687   AACGCAGGGATTTTG              CCTCTC TTGT GCGAGG               TATCGTCGTGGTTGA  47 76
 C1I96_08725 1998322 .. 1998336 + -11.4  -3.23532   AGCTTCCGCGTTTGC               GCCGGA ATT TCCGGC               TGTCTTCGTTTAAAT  79 121
        tsaB NONE
 C1I96_08750 2002464 .. 2002509 + -17.1  -2.56761   GCGGTGACAGGTTTT AAT-CAGGAAAGGCGCCGGA TATTACT TCCGGCGCCTTTCCTGCATC TGCCTTCCGCTTTTC 100 34
 C1I96_08755 2002897 .. 2002911 +  -5.6  -3.14132   GACTCGTCAAATGCC               GGTCTG GCG CAGTCC               TTCATAAAGGACGAC  52 209
 C1I96_08765 2004019 .. 2004032 +  -9.5  -4.17048   TGCGGGCATGCCTGG               CCGGC TGTG GCCGG                TTCTTTTCCCGGGCG  83 48
 C1I96_08785 2006479 .. 2006493 +  -4.3  -3.86346   GCGGAACCGGTGCGA               TTCCT ATAAG AGGAA               TTTGTGACGAAGTCC  57 4
 C1I96_08790 2007324 .. 2007363 +  -2.8  -3.65351   GGAATGGCCGTAAAT  GCGCTTGATGGCGGCAT CCTCTCC GTGCTGCT-TCTGGCGC  TTTAACTCAGCGTCC  50 290
 C1I96_08875 2027206 .. 2027217 +  -2.2  -4.07568   GTCCTTATGTAATTG                TGTC TTCC GGCA                 TTTTCCCAAAAGGAA  55 70
        sufT NONE
 C1I96_08895 2032078 .. 2032090 +  -4.8  -3.49102   TGTTGCCTGTCTGCC                GGGA AATAC TCCC                TTATATCCGCCCTGT  55 132
 C1I96_08965 2048678 .. 2048691 +  -2.3    -5.055   ATCCGCCAGCGGTCC               GTGTC CTTG GTCAC                TTTTTTGGGGATTAC  75 508
 C1I96_08975 2051464 .. 2051489 + -13.3  -2.73622   TTTATTTTCTTCACC         TGCTTCGGCCA TTAA TGGCCGGAGCG          TGCTATCATTCTTAT  84 11
 C1I96_08980 NONE
 C1I96_08985 2052714 .. 2052730 +  -7.3  -4.84017   TCCGCAGCCTATGTC              CGTCATG CTC CATGATG              TTTTTCTGCGGGATT  83 411
 C1I96_08995 2053390 .. 2053400 +  -5.4  -3.12892   TGTAAGAAGAGGAAG                 GAAC CTT GTTC                 TATTCCAATCTTTTT  52 36
 C1I96_09000 2054307 .. 2054319 +  -2.7  -3.30903   ATCTTGTTAAAACTT                CTTAT TAC ATGAG                TTCTGCGGGGATTTT  47 14
 C1I96_09005 2056728 .. 2056754 +   -13  -4.77036   CACGGATAGAAAAAA         GGGCACGTTTCC TTC GAAAGCGTGCCC         TTTTTGATACTACGG 100 51
 C1I96_09015 2060099 .. 2060115 + -10.9   -2.7965   ATTCCTCGATAAACT              CCATCAG TTC CTGATGG              TCGTCTTCCGTTTCT  66 481
        dnaG 2064563 .. 2064582 +  -7.2  -2.83641   GTACAATGTAGTGCC            TCGATACC TCCG GGTATTGA             TATAATGGTGAATTG  57 30
        rpoD 2066695 .. 2066752 +  -7.1  -2.55437   CCTGACCGGATTTGC GCCGCATGCCGT-GCTACGCTTCGT GGTCATGAAG ACTT-GCGTAGCTGCGGTATGCGGC ATGTTCATGTTACTG  56 36
 C1I96_09040 2067479 .. 2067498 +  -6.6   -4.2123   AAGAATTTTACATAT            CAAATTTT TGTA AAAATTTG             TTTGTTAGCTGAGTG  71 41
 C1I96_09045 2068179 .. 2068193 +  -2.8  -3.03338   ACGAAGTAATATCTG               GAGG ATGAATG CCTC               TCTTAAAACGCTTCT  43 98
 C1I96_09050 2068815 .. 2068830 +  -4.6  -4.25104   GCCGCGCGTATCGGG              GGCCGT AAAT ACGGAC               TTTTGATGAAAAGGC  64 142
 C1I96_09070 NONE
        hrpB NONE
 C1I96_09080 2079601 .. 2079628 + -17.8  -5.47159   AGGTAGTTAGTTGGA        GCGGCTACGGGA GAAA TTCCGTAGCCGC         TTTTTTGTCTTCCCG 100 181
 C1I96_09085 NONE
 C1I96_09090 2082642 .. 2082652 +    -4  -3.94634   TTAGCATTATAAGCG                 TCAA AAT TTGA                 TTATTTCAACTCATG  57 29
 C1I96_09095 2084428 .. 2084441 +  -5.3  -3.05384   GCTGGAACTGTCTGC               CGTTT AAAG AAACG                TTCCCTCCGGAGGGA  51 19
 C1I96_09100 NONE
 C1I96_09105 NONE
 C1I96_09110 NONE
 C1I96_09115 2090333 .. 2090343 +  -2.4  -2.81584   GAGCCTGACGAAAAT                 GCCG TGA CGTC                 CGTTTTTCTTGTCAA  40 33
 C1I96_09120 2091208 .. 2091238 + -21.3  -4.15841   CTTTCTTCCTGTTCA       CAAGCCGTACCGG TTTTT CCGGTACGGCTTG       TTTATGGTTTCATGG 100 58
 C1I96_09140 2095703 .. 2095713 +  -8.2  -5.08824   GTTCTCTTTCAACGG                 CGGC ACG GCCG                 TTTTTTCCGTAACAC  93 77
 C1I96_09155 2097104 .. 2097117 +  -8.1   -2.8742   GCGTACAGGTCCGGC               GGCCA TCCC TGGCC                TGATTCCTCTTTCCG  59 9
        ilvB 2099157 .. 2099184 + -19.2  -3.05384   CTATTGAGCCTTAAA        CAGGAGCCGTCC GTAA GGGCGGCTCCTG         TTGCATGGCGGCGCA 100 59
 C1I96_09165 NONE
 C1I96_09170 2104477 .. 2104499 +  -7.6  -5.14965   CGGTTTCAAAGGGTG           TGGCCGGGTT GAG AGCCAGGCCG           TTTTTTACTCCGGCT  88 454
 C1I96_09185 2109370 .. 2109391 +  -3.7    -4.652   CGGGCGGACCGGGTC           GAGGCTGGGG TGC CCTCA-CTTC           TTTTTCCAGTAGTTT  66 102
        nspC NONE
 C1I96_09200 2113783 .. 2113794 +  -3.6  -4.67942   AGGGAGCGTCTGTCC                CGTG CCGG CGCG                 TTTTCCTTTGTTGCG  69 67
 C1I96_09210 NONE
 C1I96_09215 2121311 .. 2121338 +  -7.6  -3.94877   TGGAGAAGTTTTCCA        GCCGTGAGCCTT TTCC GGGGTGCACGGC         TTGTTGTTACGGGCT  70 74
 C1I96_09220 2124040 .. 2124056 +  -4.3  -3.41988   TCCTGTTACTGCGCG              TACCGGA GTT TCCGGCG              TCTTCTTCCGTCCGC  52 73
 C1I96_09230 2127595 .. 2127605 +  -6.8  -3.15544   TGGTAACGGCGCTTC                 TCCC TCC GGGA                 TTGATCAAAATGGCG  54 438
 C1I96_09240 NONE
 C1I96_09245 2128800 .. 2128810 +  -3.2  -4.18762   TCGCGAAGCGGGGCA                 GGGA ATA TTCC                 TTTTGCATGGCCGTT  58 44
        hxsB NONE
        hxsC 2134576 .. 2134601 + -14.9  -5.18995   AAGAAATAGTACCTA         GGCATTTTCCT AATT AGGAAAATGCC          TTTTTGTGTTATATT 100 339
 C1I96_09280 NONE
 C1I96_09285 2137223 .. 2137247 + -11.4  -4.34737   ACTGGTAATAGAAAA          CCCTGGGAGC GTTTA GCTACCAGGG          TTTATTGATTGGTAC  93 256
 C1I96_09335 2147134 .. 2147151 +  -2.7  -4.26079   GTGAACGGTTCCGCG             CGGAAGA TGGG TTTTCTG              TTTTCCGTAGTTTCC  59 106
 C1I96_09340 2149332 .. 2149359 +  -4.9  -3.46141   ATAAAACCGGGTCAC        CGTCTCCTTTT TAAATT GAAAGGAGGTG         ATTTTTCATCATAAT  55 40
 C1I96_09345 2151783 .. 2151818 + -16.9  -3.05596   AATTGTTGAACTTTT    CAGGGCCGCTTCCTC CAGGAT GAGGGGGCGGCCTTG     TTGCGTCCGGACATC 100 50
 C1I96_09355 2154201 .. 2154214 +  -2.4  -3.01802   ATTCCTTCTTTACCC               GCAT GGGGGG ATGC                CTTTATAGTAATTTC  42 143
        lpdA 2155631 .. 2155667 +   -16  -3.63228   CACATGTAACGGTTT    TCAATGGAAGGGCCCC CATCC GGGGCTCTTCCATTCA    TTCCTTTGTCATGCA 100 32
 C1I96_09420 2169917 .. 2169927 +  -5.4   -3.1811   AAATACTCCATTACA                 GATG ACG CATC                 ATTTGTTATCGGCAC  50 134
 C1I96_09440 NONE
 C1I96_09445 2173444 .. 2173462 +  -9.5  -5.50723   ATTATGTAAATTAAA             GGCTCGC TGTTT GCGGGCC             TTTTTGTTTTGCTGC 100 60
 C1I96_09450 2174753 .. 2174771 +  -3.8  -4.26076   TTGGAAAAAACACTC             TGGAACAG GTT CTGTTGCG             TTTTGATGCGGCTGA  62 390
 C1I96_09460 NONE
 C1I96_09465 2177447 .. 2177482 +   -12  -4.15565   GTTCTATAAAAACAA    CAACCGCAAGCCTT GTTTTTCA AAGACTTGCGGTTG     TTTTGAAATGGTGGA  95 128
 C1I96_09480 2180614 .. 2180642 +  -4.6  -3.10343   TCAAATGAATGGCTG       TCTATCCCGATCC AGTA GGGTCGAGA-AGA        TTGCCTGATCAATAT  50 267
 C1I96_09485 2180842 .. 2180868 +  -7.3  -5.27335   GCCTTTCTTTTTTAA         GAGTCTGCACT TTAAC GGTGTAGGCTC         TTTTTCTTTGCAAAC  91 43
 C1I96_09490 2182352 .. 2182380 +  -9.5   -2.7782   GCGGCTCCCATCTGA        GCCGGTGTCTTGG CAA CCACAATACCGGC        GTTCTTCAAGGCTTC  63 270
        hisD 2186082 .. 2186115 + -11.9   -2.8372   TTGCGAGATTTGTCG     GGATGGAAC-GCTCAT CGG ATGGGCGGTTTCATCC     ATTTGCTCGGAAATC  76 214
 C1I96_09515 NONE
 C1I96_09520 NONE
 C1I96_09525 2188949 .. 2188972 +  -3.8  -4.78981   AGGTAGGATGCGAGG          GGCTTCGTAA GACG TTGCGAGGCG           TTTATTTTGCTTGAT  71 35
 C1I96_09530 2190948 .. 2190960 +  -4.8  -3.29461   ATATTCTCAAGCAGA                GCTG AAAAA CAGC                TTCTGCAGAACCTTC  52 364
 C1I96_09535 2191529 .. 2191550 +  -8.1  -4.36914   CACCTGGTTTGTCTG           CC-GGATAAG CTG CTTATCCTGG           TTTTCTACCAGGGCA  79 338
 C1I96_09550 2195477 .. 2195497 +  -3.9  -4.11033   TGCTCAGTAAACGGG            ACGTATCAG CTA CTGCTACGA            TTTCTGGTCTTTGCT  60 31
 C1I96_09555 NONE
 C1I96_09560 2201493 .. 2201522 + -23.7  -2.78384   CCTCCTGACCCTCCA       GGGCCGTTCCGGA CAAC TCCGGAACGGCCC        TCTGCTGCCCGAAAA 100 86
 C1I96_09600 NONE
 C1I96_09605 NONE
 C1I96_09610 2212257 .. 2212286 + -11.5   -5.4505   ATACGTCTTAACGAA       CCTTCCTCCTC-TG CAA CATGAGGTGGAAGG       TTTTTTATTAACGAC 100 60
 C1I96_09615 NONE
 C1I96_09620 NONE
 C1I96_09625 2217977 .. 2217995 +  -9.6  -2.80816   ATTGTATAATATCTG             GCGAAAGG AGG TCTTTCGC             TATGATAGATAAAGA  68 47
 C1I96_09630 2218814 .. 2218845 + -14.6  -3.68709   ATTGGTAAAAAGACG      GGCATACACTTCGG ATGA TTGAAGTGTATGCC       TTATGCTTTATATTG  95 33
        coaD 2224160 .. 2224188 + -10.1  -3.80881   GCTGTCCGGTGGAGA        GGGGGCAGGGGCG GAA CGCCTGCGCCTCC        TTCTGTCTTTCTGCT  82 71
 C1I96_09680 2228261 .. 2228310 +   -18  -2.71712   GTTTACCGTTTTTAA GCGG-ATGC-TCCGCGGCCCTTTC ACCG GGAAGGGCCGCGGAAGCGTTCCCC CTTTCCGGGGGCGCA 100 26
 C1I96_09685 2229169 .. 2229185 +  -2.3  -3.72363   TGTTACCATTTTTCC              GCATT TAATAAT AATGC              TTTGCCGTTTCCATG  50 238
 C1I96_09690 NONE
 C1I96_09695 2231938 .. 2231957 +  -9.4   -4.8143   TGACGGCATCTGTTC            CATCAATG AGGC CATTGATG             TTTTTCACTTCTTCA  86 421
 C1I96_09710 2235831 .. 2235856 +  -6.8  -4.42238   TACGGGGCGCCTTCC         CGGGCGCG GGTAAAGGAG CGCGCCTG          TTTTCCTTCCCCTCC  74 13
 C1I96_09715 2238066 .. 2238090 +  -7.8  -3.04144   ATGAATAGGCGCTTT          CCCTGCCGGA ACGTG TCCGGTAGGC          TGTTACCACTGCGCG  60 125
 C1I96_09755 2246401 .. 2246415 +  -2.8  -5.24129   GCGCCGCCTGGGGCA               GATCAA GCA TTGACC               TTTTTTATGGACCAG  77 13
 C1I96_09760 NONE
 C1I96_09765 2247978 .. 2248001 +  -2.2  -3.62096   CACCCCTCCGGCTAC          CTGGCCGCGG ATGT CCGCATACAG           TTTCCGGTAGTCGGA  48 146
 C1I96_09795 2254415 .. 2254428 +  -5.3  -2.87132   GGCTCTGGCCCCTGT               GGAAT CATA ATTCC                TCTCTCCGGCAGGCA  49 16
 C1I96_09800 NONE
 C1I96_09805 NONE
 C1I96_09810 2258389 .. 2258399 +  -4.6  -4.25283   TTTTACAAAAACGGG                 CGGT CTT GCCG                 TTTTCATGCCGAGAT  64 294
 C1I96_09820 NONE
 C1I96_09825 NONE
 C1I96_09830 NONE
 C1I96_09835 NONE
 C1I96_09840 2267248 .. 2267272 + -17.9  -5.27335   GAAAATATCTTCAGA          GCCGTCCCGTT TAC AGCGGGACGGC          TTTTTATTTCCCAGA 100 64
 C1I96_09845 2268651 .. 2268671 +  -2.5  -5.27335   GGAATCCGCTGACGA            TATCCGG AAGGGGG CCGGATC            TTTTTGTTTGAAAAG  76 232
 C1I96_09905 NONE
 C1I96_09910 NONE
 C1I96_09915 NONE
 C1I96_09920 2284985 .. 2285010 +  -4.1  -4.28018   GTACAGCTTCTTCCG         TACCGGGAAAAT AAA ATGTT-CCGGTA         TTTTCCTGAGCTATT  62 92
 C1I96_09935 2287356 .. 2287385 +  -2.8  -4.76075   CCAGCCGGATATCTT       GTTTGCAGCG GGGCCTTGTG CGCTGCCAGC        TTTTGTTGATCTCCT  68 174
 C1I96_09945 2289523 .. 2289538 +  -3.2  -4.56597   AATCCGTCAGCCACT              GGCG GAGGGGGA CGCC               TTTTTCAGAGGCGGC  67 525
 C1I96_09960 2291112 .. 2291146 +  -4.9  -4.58395   TGAATGAAGAAAGAA     GAAGGCATGGTACGC GGCCG GCGTCCTTTCCCTTC     TTTTTCCGGAATCCG  71 148
 C1I96_09965 NONE
 C1I96_09970 NONE
 C1I96_09975 2294334 .. 2294349 +  -3.9  -3.20111   GCTGAAACCGCAGCA              GGCCG TTTAGT CGGTC               ATTTCCTTTTTAGTA  48 16
 C1I96_09980 NONE
 C1I96_09985 2296340 .. 2296352 +  -3.3  -2.64155   AGCATCTGAAATAAG                GAGGC CCC GCATC                TGAATTTGGGAAAGA  42 27
 C1I96_09990 2297515 .. 2297561 +  -2.3  -3.12892   TTTTGCCGGCGCGTT TCCTTCCGCTCCGGAAAAATGCC GCG GGACTGTTTGCGG--CGGAAGGA TGTTAAGCTATTTTT  43 41
 C1I96_09995 2298757 .. 2298776 +    -2  -3.62224   CAGTTTAGGAAGTGA            TGCGGGCA GGAT TGCCGGAA             TTGTTGAAAAAATAT  50 56
 C1I96_10000 NONE
 C1I96_10005 2299939 .. 2299949 +  -2.6  -3.69395   GAATCCTCTAAACAG                 TATT ACT AATA                 TTATTAAATAATACA  51 4
 C1I96_10010 2300808 .. 2300845 + -17.2    -3.737   TACTTCCATGTGAAA   CAATTACAGCGCAAGC TGTCGT GCTGGCGCTGTAATTG    TTTGATACAAAATTA 100 47
 C1I96_10015 2301641 .. 2301680 + -10.2   -3.0806   GCAAATAAGAACGCA GA-G-CGGCCGGGA-TTCC TCATT GGAAATCCCGGCCGACGTC TGTTGAGGATTTAAG  72 126
 C1I96_10025 2302867 .. 2302915 + -15.3  -4.29326   TGATTAAAGTCAGAA CGGCCTGAACCTCATTCCGGA AAAACAG TCCGGAATGGAGAACAGGCCG TTTCTTCAATTTGCG 100 18
 C1I96_10035 2304762 .. 2304774 +  -5.5  -4.57569   TCCCGTGCCGGGAAC                CAGGT AGT GCCTG                TTTTTCAGCCGGTAG  73 19
 C1I96_10045 2306781 .. 2306791 +  -2.4  -3.53761   TTGCAAAAAATGCTG                 CCGG AAC CCCG                 TTTCCCGGCAAGTTG  47 59
 C1I96_10050 NONE
 C1I96_10055 2309294 .. 2309307 +  -5.3  -3.63922   GAAAGCCGGGTAATT               CTGTA TTGT TACAG                TATTTTCCAGGGAAT  59 48
 C1I96_10065 NONE
 C1I96_10070 NONE
 C1I96_10075 2315114 .. 2315125 +  -5.8   -3.6106   ATGTGGAATTATAGG                CGCA GGAG TGCG                 TTTACGGCTGTTCAG  59 27
 C1I96_10085 2315989 .. 2316012 +  -5.2  -5.73978   GTGGATTTCCTTATA          TCCGCGCATG GCGT CATGCACAGA           TTTTTTGTTTCTGGT 100 342
        nagB 2317876 .. 2317908 + -10.6  -5.26316   TTTTAGTAACGGAAA     TGCCGTCTTTCC-CG GTTT CGTGGGAAGGCGGCG      TTTTTTATGGGATGA 100 48
 C1I96_10105 2319467 .. 2319477 +  -3.2  -3.01712   GAAGCAGCCGATGTC                 TGGA AGC TCCG                 TATTGAGGGAGCGGA  45 455
 C1I96_10115 2321282 .. 2321302 +  -7.5  -2.71011   TCTGGAGGGCTTCTA            TGGAGACGG TTT CCGTATCCG            TAATTCCGGCACCGT  53 137
 C1I96_10125 2325394 .. 2325404 +    -4  -3.63367   CCTCAGGAAAAGGAG                 TTCT CGG AGAA                 ATTTTTCTTAAACCA  55 178
 C1I96_10155 2333193 .. 2333209 +  -7.2  -2.98823   TGCTCCGGGCAAGAT              TGCCGC GGGGG GCGGCG              TATATATCCCGCGAA  59 124
 C1I96_10160 2335315 .. 2335342 + -17.8  -5.95539   CGGTAACATGTTCAA        CGGGCCGTTTTC GTTG GAGAACGGCCCG         TTTTTTTGTTTCCGG 100 51
 C1I96_10170 2336659 .. 2336673 +  -4.2  -3.21934   GCGTCAGGGGAATAG               CCGG GGTGGTG CCGG               ATTTTGTGAGGAAGG  49 211
 C1I96_10180 2337276 .. 2337291 +  -6.2  -2.91383   TTTTTTTCTTGAAAA              CCTATA CCCC TATAGG               TATATAAATGCCCGT  52 94
 C1I96_10185 2339265 .. 2339277 +  -3.3  -4.59773   TGATTGCCGGGAGGG                AACGG AGT CCGTC                TTTTTGGCGCTCCGG  66 74
 C1I96_10190 2341340 .. 2341363 +  -3.8  -3.79687   TTGAGCCAGGATATC          CGCC-GTCGCT CAC AGCAATAGGCG          TCTTTTCTCCGGCAT  57 5
 C1I96_10195 2342413 .. 2342462 + -19.4  -5.79595   GAAGTAAAAATTGTT CCGAAAGGCATGGCCGTCTTCC GTCGAA GGGGGAGGGCCATGCCTTTCCG TTTTTTATTTTAAAC 100 34
 C1I96_10200 NONE
 C1I96_10205 2343844 .. 2343856 +  -4.7  -3.90112   ATTGTGCGATCTGCT                GCGGC ATT GCGGC                TTTCCTTGGCAGGCA  59 68
 C1I96_10210 2344995 .. 2345014 +   -15   -5.4833   ATGAAGTTGACGACA            GCTGCCCC GTGC GGGGCAGC             TTTTTTATTCAGTGA 100 74
         alr 2350429 .. 2350442 +  -5.9  -2.93549   GAGAGGGGACGTCTC               CCGGC AGAG GCTGG                TGCTTGTTGGCCCTG  51 329
 C1I96_10300 NONE
 C1I96_10305 NONE
 C1I96_10310 NONE
         def 2368095 .. 2368107 +  -6.2   -4.1466   ACGCTTTTTCCGGAT                CCGG CTGAA CCGG                TTTTCCGGATTCCCT  69 206
 C1I96_10330 2373643 .. 2373659 +  -7.9  -3.41051   CAGGGTGCCCAGGTT              CAGCACG CTG CGTGCCG              TTCTGGTGACGCTGC  61 440
 C1I96_10345 NONE
 C1I96_10350 NONE
 C1I96_10355 NONE
 C1I96_10360 NONE
 C1I96_10365 NONE
 C1I96_10370 2380996 .. 2381011 +  -6.8   -3.9712   TTAAAGTAGGGAATT              CCTGCG TTTC CGTAGG               TTTCTAGTCCAATAC  68 300
 C1I96_10380 2383323 .. 2383347 +  -4.9  -4.11216   GTAATCCCCGTTCAG          ATTCAGCGTGG CTA CCACGTCGAAG          TTTTCCGGATGGAGC  61 460
 C1I96_10400 NONE
         tmk 2388154 .. 2388168 + -11.4  -3.53012   CCGCAATGACGAGCT               GCTGCG CCC CGCAGC               TTTCCGCAACCCCGG  75 403
        tatC NONE
 C1I96_10435 2395143 .. 2395160 +  -5.5  -4.09685   GCGAGGCGGTTCTCT             CCCGC AGCGGAAA GCGGG              TTTTGAACAATCCCG  64 85
 C1I96_10445 NONE
 C1I96_10450 2397562 .. 2397573 +  -5.8  -3.95073   TGATGCATTCCGCAT                CCGT CACT ACGG                 TTTCTCCCTGTGCGC  64 172
        rnpB 2399660 .. 2399675 +  -3.9   -3.4149   AACATCCGGGAAATT              GTCCC GTTCCG GGGGC               TCTTTGGGGTTGCAT  50 90
        murA NONE
 C1I96_10470 2401403 .. 2401429 + -16.6  -5.36441   GTACTTTTCTTTCAG         CACCCCCGTCCT TTG AGGACAGGGGTG         TTTTTTATGTCCCGG 100 64
 C1I96_10475 NONE
 C1I96_10480 2403642 .. 2403676 +  -9.3  -3.65542   TTTTTTCAGGAAAAA    GCGCTTCCTCC-AGAC GTTC GTCCCGGAAGAAGCGC     TCTTTTGAGGATAAG  74 159
 C1I96_10500 NONE
 C1I96_10505 2407649 .. 2407679 +   -22  -4.14392   GAGCAAAAAATCGCA       GAGCCGCTTTCCCG ATT TGGGAAAGCGGCTC       TTTTAGCAATTGAAA 100 51
 C1I96_10515 2409625 .. 2409642 +  -7.7  -4.07568   AACGTGACGGAATTC             CTGTTCC TAGT GGAACGG              TTTTAACAGACAACA  73 2
 C1I96_10520 2410687 .. 2410699 +  -2.7  -2.72461   TGGCATTACATATAT                TATGC GAA GTATA                GTTTAGGCAGCATTC  41 151
 C1I96_10525 NONE
 C1I96_10530 2412952 .. 2412962 +    -4  -4.68506   TTTTTAGTTTGCAGG                 GATA TTT TATC                 TTTTTGAGATTCCTT  71 68
 C1I96_10535 2414330 .. 2414385 +  -4.7   -4.4715   AAGATGCTGCCCGAA CGGCGGTTTCCCTGTTCATGGAATGC ACAGA GCATTCT-TGACGACCGGAGCCGCCG TTTTATACATTAAGG  67 54
 C1I96_10540 2415583 .. 2415616 +  -7.9  -5.27779   AAGCCGCCGGGGATC     CCATGCCGGGCTGGC TACC GCCCGCCCGGCAGAA      TTTTTTGCTGTTCCA  93 45
 C1I96_10555 2417522 .. 2417547 + -12.6  -3.64703   GCGGAACATGAAAAA         CCCCGGCCGTG CAAGC CACG-CCGGGG         TTTCCGTAAAAACAG  81 147
 C1I96_10570 NONE
 C1I96_10575 2420808 .. 2420834 +  -5.8  -4.25256   AACAAACCAGGACGG        CCCAGT-CGCC CAGCAT GGCGTACAGGG         TTATTTTCGTACAGC  69 117
 C1I96_10585 2422968 .. 2422999 + -15.2  -5.07652   TATATTATTTTAATC      GCCCGGGGCTGTTGG CAT TCAAC-GCTCCGGGC      TTTTATTTTCCCCCA 100 50
 C1I96_10590 2423434 .. 2423454 +  -6.2  -3.20028   AAAGACGCCGTTCAT           TCC-ATCCG CATA CGGATAGGA            TAATTTTATACTGCG  55 2
 C1I96_10595 2425555 .. 2425573 +  -6.7  -3.62046   AACATGGAACACTCC            CGG-CGGA GCTT TCCGTCCG             TTGTTCCAAAGGTCA  63 46
 C1I96_10670 2442614 .. 2442626 +  -6.3  -4.16146   AATTATGCAGAATAG                TCTTG TCG CAAGA                TTTTCAGAATATTTT  71 51
 C1I96_10695 2450529 .. 2450543 +  -4.2  -3.17688   TCCGCGCAGGAAAAG               CCGTTT CCG AATCGG               TTCCTGACGTCATTC  48 4
 C1I96_10700 NONE
 C1I96_10705 2453224 .. 2453237 +  -8.1  -5.23316   AGAATTCTCTGCATC               TGCGC TCAC GCGCA                TTTTTTCATGTGGTC  93 264
 C1I96_10710 NONE
 C1I96_10715 2455484 .. 2455513 + -20.1  -4.85599   AATGTTTCCTGCCGG       GCGGCCATTCCGT ATCT ACGGAGTGGCCGC        TTTTTATGCCCTCAA 100 51
 C1I96_10730 NONE
 C1I96_10735 NONE
 C1I96_10755 NONE
 C1I96_10760 2463598 .. 2463626 + -17.6  -4.49556   TCCGGCAAAGGAAAA        GGCCTTAAAGCG TTAAC CGCTTTAAGGCC        TTTATTTGGTGGAGC 100 208
 C1I96_10770 NONE
 C1I96_10775 2464985 .. 2465019 +  -9.9  -4.52703   TTTCCAATACGAAAA     AACCGGACCTCCCCC CCTAT GGGAGAAGTCCGGTC     TTTTCTCGTCGTTTA  91 148
 C1I96_10785 NONE
 C1I96_10790 NONE
 C1I96_10795 NONE
 C1I96_10800 NONE
 C1I96_10805 2472015 .. 2472031 +  -6.5  -5.52096   GGGCTGCCAATCCAA              CCCTCCT TCA AGGAGGA              TTTTTTGTTGCCTTT  93 32
 C1I96_10810 NONE
 C1I96_10815 2474867 .. 2474892 + -13.3  -4.72272   AACTCTTTTTTCCGC         GCCGGTTCACG TTCC CGTGAACCGAC          TTTTTCATGCGGCAA 100 58
 C1I96_10825 2476893 .. 2476916 +  -8.8  -3.09004   ATGGAGTAGGCAATA          TTCGGGTGCC TCCG GGCTTCCGAA           TCCTTTTCCGGGTCG  63 342
 C1I96_10835 2482319 .. 2482360 + -24.5  -2.71791   ATTCCAGACCCGCTC TTTCCGGGCGGAATCCGGC TGCT GCCGGGTTCCGCCCGGTGA  ATTTACGGAAAAGGT 100 55
 C1I96_10840 NONE
 C1I96_10845 NONE
 C1I96_10850 2485394 .. 2485419 + -19.1  -3.10017   CCCATCCGCTAAAAA         GCCCGTGGTTC CGAA GAACCACGGGC          TGTCTATTAACCCTT 100 336
 C1I96_10895 NONE
 C1I96_10900 NONE
 C1I96_10905 NONE
 C1I96_10910 NONE
 C1I96_10915 2505190 .. 2505203 +  -9.5  -4.08767   CTCCATTTCCTCCGC               GCGCC GTAC GGCGC                TTTTCACCGCCTGAA  81 115
 C1I96_10935 NONE
 C1I96_10940 2509968 .. 2509988 +    -6  -4.57073   GCTTTCCCCGAAGTC            CCGGCGGT ATTTG GCCGCCAG            TTTTTCAGGCCAGTC  75 173
 C1I96_10950 2512470 .. 2512489 +  -2.8  -4.24204   TTTTTTCCGCAAACC            CCAGAAAG GCCT TTTTCAGG             TTTTCCCTGTCAATG  61 338
 C1I96_10975 2518650 .. 2518665 +  -2.4  -4.99861   GGAAATATAGTAAAT              GACGGG GCTT TCCGGC               TTTTTGTACTTCCTG  72 333
 C1I96_10985 2522264 .. 2522286 +  -9.8  -5.64873   GCCTCTTTTCCCCAA           GCCGCTCCCT AAC AAGGAGTGGC           TTTTTTCTTATTAAC 100 58
 C1I96_11005 2526073 .. 2526096 +  -5.8  -2.93975   AAGACGGACAATCCT          CTGCGCCGGG AATG TCCGGCGCCC           CTCTTTTTCCAACCT  53 69
         alr 2527246 .. 2527260 +  -4.2  -2.72344   TATTAAACTTTCAAC               CGGG GAAGAAG CCCG               TCATTCCGCGTGGAA  44 35
 C1I96_11015 2527815 .. 2527854 +  -2.8  -4.27965   CCTTTTCCCATTCCG  GCCCATGTCCCGTTTT TTTTACCC GGAGCTTGACATGGGC   TTTCCTTTTCATTAT  59 71
 C1I96_11020 NONE
        cysK NONE
        thiE NONE
 C1I96_11035 NONE
 C1I96_11040 2532533 .. 2532553 +  -2.4  -3.06501   TTCCGCTTTAATGCG            CCCGCGCT GCAAA AGCGCCCG            TTACATAGCCCTATA  42 133
 C1I96_11045 2532642 .. 2532675 + -21.3  -5.48028   GGCTACCACTTCTAA     TAAAAGAGCCGTCTC TCCA GAGACGGCTCTTTTA      TTTTCTTTTTATTTC 100 33
 C1I96_11050 NONE
 C1I96_11055 NONE
 C1I96_11060 2537176 .. 2537190 +   -10  -3.53811   CAATCTCGCGCCGCA               CGGCTT CCA AAGCCG               TTTCCCCCGGATCAA  70 332
 C1I96_11070 2539373 .. 2539402 +  -2.9  -4.29981   AGAGCTGATATTAAA       TAGAAAGCATGAA ACGA TTCTTCCTTTCTG        TTTTAGCTCTATTTG  59 255
 C1I96_11075 2539959 .. 2539970 +  -3.6  -4.63928   ATTTCAATTCGCGGG                CTGC AAGT GCGG                 TTTTTACGCTCATCT  66 82
 C1I96_11105 NONE
 C1I96_11110 NONE
 C1I96_11115 2548910 .. 2548935 + -18.3  -5.37345   AACTGCTCCATGAAG         GACGGGGCGGC CCTG GCCGCTCCGTC          TTTTTTATGCTTCAG 100 52
         cls 2551874 .. 2551897 +    -6  -3.61715   CTCTGCAACCTGGCG          CGACT-GACGG CCC CCGTCCAGTAG          TTCTTCCGGGGAATC  61 2
 C1I96_11135 2553557 .. 2553588 + -17.3  -4.14652   CTGCTCAAACCGTTT      GCGGGCAGCCCCT CCATAA AGGGACTGCCCGC       TTTGCTGTTTTTACT 100 55
 C1I96_11170 NONE
 C1I96_11175 2562008 .. 2562018 +  -2.6  -3.04864   TATTATACATTTGTT                 TAAT TAA ATTA                 TCCTTTCATTATGCA  43 98
 C1I96_11180 2563427 .. 2563441 +  -2.1   -3.2916   AAATAACCTCCCTTC              T-CCGG AGAC CCGGCA               TCTTCCCTTTTTCCC  45 35
 C1I96_11185 2566690 .. 2566700 +  -2.4  -2.72829   CCATGAATCATTAAA                 AGGG TAA CCCC                 CTTTGCAACCATCTG  39 19
 C1I96_11190 2568213 .. 2568241 + -18.9  -4.64861   CTGACTGTTTTTTCT        CCCTCCGGCAAGC ACA GCTTGCCGGAGGA        TTTGTTTTCCGGCCC 100 71
 C1I96_11195 2568574 .. 2568588 +  -8.6  -3.55622   TGTGCCGCCTCCCGC               CGGATT TCT AATCCG               TTTGCGGCAATTCGA  69 96
 C1I96_11200 2569587 .. 2569617 + -13.4   -4.7268   ACTTTTTCCTTACCG       CGTCCATTCCTG CTCCGTT CAGGGATGGACG       TTTTCTTCACTCTTT 100 40
 C1I96_11205 2572782 .. 2572792 +  -2.4  -4.72272   GAAAAGCATCCATCC                 CTCC CCG GGCG                 TTTTTCATGGAACGG  67 140
 C1I96_11225 NONE
 C1I96_11230 2576558 .. 2576574 +  -2.2  -3.10012   ACATCCGTTGAAATA              GCGG AAAAAAACG CCGC              TTCCATCCTCGGATT  43 60
 C1I96_11235 NONE
 C1I96_11240 2578182 .. 2578196 +  -2.7  -3.86015   TACTGAAAAAGCCAT               GGCGG CAATT CCGGC               TTTCTGCCACCAATG  54 214
 C1I96_11245 2579991 .. 2580020 + -17.9   -4.3739   CAATGTAAAACACAC       CAGAAGCGCCGGG TTCG CCCGGCGCTTCTC        TTTTCTACGGAAATG 100 64
 C1I96_11250 2580414 .. 2580426 +  -9.1  -4.07568   TTTCATTTCCTTCAG                CAGGG CAT CCCTG                TTTTCCGGAACAAGC  75 128
 C1I96_11260 NONE
 C1I96_11265 2583237 .. 2583264 +  -7.6  -3.14051   TGCCGGAACAAAAAA        AGAGCGCCGGAT TCTC GTCCGCCGCTCC         TGTTAATCAAGCTCC  62 508
 C1I96_11280 2584061 .. 2584082 +  -9.4  -4.88407   CCATTTTTCTTAAAA           CCCCGTTC CTTTCC GGACGGGG            TTTTTCATTGCCTCC 100 38
 C1I96_11305 NONE
 C1I96_11310 NONE
 C1I96_11315 2589044 .. 2589064 +  -3.4  -5.43866   TTAACTGACAAGCCT           TCCA-GATT CAAA AATCCTGGA            TTTTTTTGGAAATTG  81 50
 C1I96_11335 NONE
       cas5c NONE
       cas8c NONE
       cas7c 2601492 .. 2601534 +  -9.9  -3.65522   TTAAATCTCTGAAAC TG-ACAGAGGCACCTTCCGC GGCT GTGGGAGGTGCCTCTACGCA TTATTAACGTCCATC  76 46
 C1I96_11375 2609508 .. 2609518 +  -2.6   -4.7373   ATATTAATCACCAGT                 TTTT ATA AAAA                 TTTTTCATCCGCTCC  68 42
 C1I96_11380 2611923 .. 2611952 + -11.3  -4.65895   ACCGCTTCCATTTAC       GGGCTGCCCCGCC GAAA GGTGCGGCAGCCG        TTTTTCACTAAAAAA 100 60
 C1I96_11405 2616671 .. 2616689 +  -3.1  -4.07687   CGGATACCTCCGCAT             CCGGT CACCTTTCC ACCGG             TTTTCCGGAGAAAGT  56 96
 C1I96_11420 2620967 .. 2620995 + -18.3  -5.32882   CAGTTAAAAATGTTG        TTGCCTGCAAGGT TCT GCCTTGCAGGCAA        TTTTTTGTAATCATC 100 56
 C1I96_11430 2623140 .. 2623163 +  -3.1  -3.34398   ACGGTCCGATTGCAT          C-GGACCGCT TCCCC AGGGGTCCAG          TATTTCCAAACAACA  47 99
 C1I96_11435 NONE
 C1I96_11440 NONE
 C1I96_11445 NONE
 C1I96_11450 NONE
 C1I96_11455 NONE
 C1I96_11460 2630446 .. 2630456 +  -2.6  -4.79223   GCAGGAATTCCCCTT                 TATT TAA AATA                 TTTTTCATAATCTCC  68 5
 C1I96_11465 NONE
 C1I96_11470 2632351 .. 2632370 +  -3.6  -3.87116   AAATATCCTTTATTA            GAAAAATC CATC GTTTTTTC             TTTAGATTATATTTA  55 72
 C1I96_11475 NONE
 C1I96_11480 NONE
 C1I96_11485 NONE
 C1I96_11490 NONE
 C1I96_11495 NONE
 C1I96_11500 NONE
 C1I96_11505 NONE
 C1I96_11510 NONE
 C1I96_11515 NONE
 C1I96_11520 2642624 .. 2642636 +  -4.7  -3.51633   TGCCTCAGGATTGTG                CCGGG AGA CACGG                TTCTGTCAGGTATAT  55 419
 C1I96_11525 NONE
 C1I96_11530 2644785 .. 2644797 +  -6.3  -2.65139   AAAACATTTTGAAAA                TCTTG CGC CAAGA                CTATTCTTGCATAAT  53 137
 C1I96_11535 2647144 .. 2647157 +  -2.3  -3.10164   TATAGAGTTCTCTTT               GGGAA AAAA TGCCC                TTGCATGATGAATAA  43 106
 C1I96_11540 2648240 .. 2648271 + -13.1  -4.67982   ACTCAACCAACGCAA      GCTCCGGCATG TGCCATCAAT CATGCCGGAGC       TTTTCTTAACTCCCC 100 58
 C1I96_11545 NONE
 C1I96_11550 2649905 .. 2649915 +  -2.4  -3.45592   ATCATCCTGAAAAAA                 GGCG TTA CCCC                 TCTTTCCTGACCATT  47 5
 C1I96_11555 2651227 .. 2651241 +  -5.6  -4.55023   ATTTTCCAGGGGACA               TCCGGC CCC GCCGTA               TTTTCTCCTGTTGAG  73 99
        menD 2654970 .. 2654994 +  -8.5  -4.56597   ACGGGCATGCAAAAA          CCGGGCGGA ACATCAG TCCACCCGG          TTTTTGCAACCGCCC  83 363
 C1I96_11575 2661100 .. 2661112 +  -4.7  -2.69458   TGTCTATTGACACTC                AGCGG CGC CCGCC                CTATATTTTCTCATG  46 199
 C1I96_11580 2662131 .. 2662149 +  -8.8  -3.21276   CCGCGGAAATAAATC             TTCCGGGA CAT TCCCGGCA             TATTCTCAGGCAAAA  64 69
 C1I96_11595 2664646 .. 2664664 +  -2.2  -3.92324   CGCAGAAATGCCACA             CTTTCCGG AAA CCGGCGTG             TTTCGTATTCCCGCC  52 64
 C1I96_11605 2668827 .. 2668838 +  -2.2   -4.2693   ATCGCGGCGGAACTG                TGCT GAAT GGCA                 TTATTTTCCTAACTT  57 20
 C1I96_11610 NONE
 C1I96_11615 2671503 .. 2671515 +  -4.9  -3.17622   GGTCTGAGTCCAGAA                GATTT GAA AAATC                TCTCTTATGACCCTC  50 130
 C1I96_11620 NONE
 C1I96_11625 2672735 .. 2672749 +  -8.6  -3.53761   GGCCTGAAACTCCAT               CTGCTT AAA AAGCAG               TTTACAGCAGAATTG  69 18
 C1I96_11630 2673928 .. 2673943 +  -3.2  -5.40072   CGTATTTAATCAATC              TGGAAC TGGC GTGCCA               TTTTTTTCAACCACC  81 518
 C1I96_11645 2677508 .. 2677532 + -18.7  -5.02476   TTCATTTCTTCCCAT          GCCGCCGTTTT TCA AAAACGGCGGC          TTTTTTACGCCATCT 100 52
 C1I96_11660 NONE
 C1I96_11665 2681078 .. 2681108 +  -8.9  -4.90217   GATGCAGGATGCACC       CGGACGCTCCCCG GATTG CAGGAAGCGTCTG       TTTTTCATCTCTTTC 100 84
 C1I96_11670 2681745 .. 2681770 +  -3.2  -5.14563   CCATTTGCGCCATGA         CGCATCCCTGG ACGGG CCGGAGA-GCG         TTTTTTCCTGAAGAC  75 61
 C1I96_11675 NONE
 C1I96_11680 2686072 .. 2686082 +  -2.4  -3.68619   ATTGAAAATCAAAAA                 TCGG TTC CCGC                 TTTCCATGAGTTCCA  50 36
 C1I96_11685 2687584 .. 2687603 +  -4.2   -2.9175   CAATTCCGTAAGATT            GTCTTGCC ATAA GGCAGGAA             TCTCATTAAGGTCTC  45 133
 C1I96_11690 2688941 .. 2688967 + -13.8  -5.55769   ATTATTTCCTTCAAA         GCAGTTCCGC ATACATG GCGGAACTGC         TTTTTTATTGTCAGC 100 59
 C1I96_11705 2692139 .. 2692149 +    -4   -2.7035   AAAATATTGATCGCA                 TTTC CCG GAAA                 TCCTGTCTAAATGGA  44 61
 C1I96_11710 NONE
 C1I96_11715 NONE
 C1I96_11720 NONE
 C1I96_11725 NONE
 C1I96_11730 NONE
 C1I96_11735 2698371 .. 2698393 + -11.2  -5.27399   GCCCTCATCAAAAAA           CCGCCGGCAT TCC GTACCGGCGG           TTTTTTCATCTGTTG 100 61
 C1I96_11745 2699814 .. 2699834 +  -3.9  -4.34402   GAATAAGGGGGAAGA            CATCGGGAA ACA TTCCGGAAG            TTTTCCTCTCCCCCC  65 87
 C1I96_11755 2702808 .. 2702837 +  -4.2  -3.63744   GGAACCCCACGGCAA       TGTACACCTGGC AATCCA GCCAGGCATGCA        TCTTTTCCGGAGCCA  54 252
 C1I96_11770 2704710 .. 2704733 +   -16  -2.78384   TTTTACGGCTGCGGC          CCCTGCGCGG GCGG CTGCGCAGGG           TCTGGTACCCGGCCA 100 73
 C1I96_11780 2705846 .. 2705860 +  -7.2  -4.39748   AAAGTTCTATTTCCG               TTGACT GTG AGTCAA               TTATTTTATCTACTG  76 191
 C1I96_11790 2707476 .. 2707490 +  -3.5  -4.62069   GCGCCATGCTGCGCT               TGCCG CCGGC CGGTA               TTTTTCACATGGGCC  69 64
 C1I96_11800 2710331 .. 2710354 +   -16  -4.77036   ACAAAATGATTCGCG          GCCGGAGTCC TTCG GGGCTCCGGC           TTTTTAATGCTCCGG 100 54
 C1I96_11810 NONE
 C1I96_11815 2711718 .. 2711745 + -15.5  -4.40804   CTAACATTTTTTATC        CTGGCCGCGGC GTGAAA GCCGCGGCCTG         TTTTGTGCCATCATG 100 42
 C1I96_11820 2712591 .. 2712605 +  -2.1  -3.87994   ACGATTTTTCAAAAT              TGACCC TTAC GGG-CA               TTTATGGGCGTAACT  52 131
 C1I96_11830 2714249 .. 2714261 +  -3.3  -4.24342   TCAGGCGGCCCGCCA                TGGCA ATG TGCCC                TTTCTTGATGAACCG  61 346
 C1I96_11850 NONE
 C1I96_11855 2720653 .. 2720675 +  -9.8  -2.90496   CCGTCCATCGTTCTG           CCGTTCCCGG CTA CCGGAAATGG           TACTTTGGAGCCGGC  68 453
        lepB NONE
 C1I96_11870 2728098 .. 2728108 +  -2.6  -3.79481   ATAGTGAAAATATAT                 TAAT ATA ATTA                 TTTAAATTAAGTTTG  54 402
 C1I96_11875 2728945 .. 2728964 +  -3.6  -4.12599   AACACATATTTAATG            CAATCTTA TGGT TTAGATTG             TTTTGGCGCATTATT  58 253
 C1I96_11880 NONE
 C1I96_11885 2731538 .. 2731563 + -18.3  -4.24342   TAGTTGGATAAAAAA         CCCGCACGGGG GAAA CCCTGTGCGGG          TTTATTCATCCCCCC 100 223
 C1I96_11890 2732281 .. 2732292 +    -3  -3.14686   ATGCCCCTTGAATAA                GTTT TTTC AAAC                 GTTTCTTCCGTTCAC  45 26
 C1I96_11895 NONE
 C1I96_11900 NONE
 C1I96_11905 NONE
 C1I96_11910 2735327 .. 2735337 +  -4.6  -3.15249   AAGCCATTTTCCTCC                 GCCT TGC GGGC                 TTCCTCACGCGTCTC  47 155
 C1I96_11920 2738489 .. 2738510 +  -6.5  -3.28791   TCTAATCCGGGGCCA           TGCCGCTCCG GGC CGG-GAGGCA           TTCTCAAAAAAACGT  59 251
 C1I96_11960 2749368 .. 2749382 +  -2.8  -3.30203   AAAATTCCGCTTCCT               CCTTGA CAC TCAATG               TTGAATTCTTCATCA  47 150
 C1I96_11965 2750434 .. 2750455 + -10.1  -4.61482   AGCCATTTCCTGCCG           GCAGGCGTC TAAG GGTGCCTGC            TTCTTTTTTCACCGG 100 55
 C1I96_11975 2751778 .. 2751825 +  -4.9  -3.53012   TCATCAGCCTCCTGC CGGGAGAATTCCTGCCCTGATGCC GTG GGAA-CAGG-C-GGAAGCCTCCCG TTTGAAAAAACAGGC  55 6
 C1I96_11980 2752422 .. 2752435 +  -8.1  -3.73072   AGGTACAGGTCTCCG               GGCAG TTCC CTGCC                TTTCATCAGGGCGTT  69 433
        secA 2761265 .. 2761276 +  -3.6  -4.07568   ACAGGCCGGGGGAAA                CGGG AATG TCCG                 TTTTCCCCGGCCCCA  58 59
 C1I96_11995 2762900 .. 2762927 + -13.6  -3.58343   CTCTAAAAGTAACAA        GCCCCTTAAA-CC GTT GGATTTAAGGGGC        TTTAAAGATGGTAGC  91 518
 C1I96_12005 NONE
 C1I96_12000 2762900 .. 2762927 -   -15    -3.965   CTCTAAAAGTAACAA        GCCCCTTAAACC GTTG GATTTAAGGGGC         TTTAAAGATGGTAGC 100 34
        uvrA 2752067 .. 2752086 -  -4.8  -5.10767   CACGGAACAGAAAAA            GGCAGGCG AATA CGACGGCC             GCCCCGGCATTCCCG  80 78
 C1I96_11970 2750133 .. 2750147 -    -7  -4.08216   TCATGCGCCTCAAAA               CGGCGG TTC CCTCCG               TCAAGGAATTTGACG  68 320
 C1I96_11955 2747597 .. 2747633 -    -8  -3.85698   GCCGCGCGCCATAAA   GCGGGCTGCCGGA-AACG ATA CGCTGCCCGGAAGCCC-C   AACAGCCCCGCACCC  70 95
 C1I96_11950 NONE
 C1I96_11945 2743290 .. 2743302 -  -4.8  -4.68645   TATTGAAAATGAAAA                CGGA CGCGT TCCG                GTATTTGCCGCAACA  73 366
 C1I96_11940 NONE
 C1I96_11935 2739742 .. 2739768 - -18.1  -5.03994   TTTTATATACAAAAA         GGCGCAGGCAT TTTGG ATGCCTGCGCC         TTTTCCTCTCCCACA 100 56
 C1I96_11930 NONE
 C1I96_11925 2738285 .. 2738302 -  -4.8  -3.53012   TTCCCGTTCCGGAAA             TGCCAC GGAATG GCGGCA              GAACACAAATTTTTG  55 237
 C1I96_11915 2735143 .. 2735174 -  -4.2  -4.05322   AAAGCTGGACAGAAA      CCGGCTGCGCTCCC AGTT GAGCGGACATCCGG       AAAAGTTGAAGGGAA  60 45
 C1I96_11845 2716651 .. 2716674 - -17.4  -4.05788   GTTCCGGAAAGCAAA          GGCGCGGCCG TATT CAGCCGCGCC           TGCCAGTTTCCATCC 100 51
 C1I96_11840 2714858 .. 2714896 -  -6.4  -4.63218   CCTCTGTCAATAAAA   CCTGCGGGTGAACATCCG GGG CGGCGGTCCTCCCGCCGT   GCGGAAGGGGCCAAA  77 51
 C1I96_11835 2713827 .. 2713844 - -10.5  -4.57073   CACGCGCTGGAAAAA             GCCAGGG AGAA CCCCGGC              GAATATCCTGTGCGG  93 209
 C1I96_11825 2712591 .. 2712605 -  -2.1  -3.05775   ACGATTTTTCAAAAT              TGACCC TTAC GGG-CA               TTTATGGGCGTAACT  42 184
 C1I96_11795 2707111 .. 2707136 -  -4.7  -4.62069   GGGGCATGGGAAAAA         GCGTTTGCTTT CATG AAGGCAAACCC          TGCGGGCCAGGTGGA  71 247
 C1I96_11785 2705501 .. 2705517 -  -5.7   -3.1505   ATGACGGTGGAGGAA              TGGGCGG AAG CCACCCT              GATCAAGGATGCCCA  52 378
 C1I96_11775 2704644 .. 2704682 -  -6.5  -4.57073   CATTTCCCTTAAAAA   GCGGGACGGCATTCCGT GACGG ACGGTAAACCGGCCCCC   TGCCCTCCTATTTTT  77 167
 C1I96_11765 NONE
 C1I96_11760 2702533 .. 2702570 - -16.3   -5.0538   CCCCACGGCAAAAAA   CGGGAACCGGCCGTCCCT ATT AGGG-CGGCCCGTTCCGG   ACAAAAAATAAAATC 100 39
 C1I96_11750 2699865 .. 2699894 - -18.7  -4.96501   TTCCATAAAAAGAAA       CCCGGCATCCCATG CGG CA-GGGATGCCGGG       CTGCAGGCCGCCCCG 100 73
 C1I96_11740 2698371 .. 2698393 - -12.7  -5.14563   GCCCTCATCAAAAAA           CCGCCGGCA TTCCG TACCGGCGG           TTTTTTCATCTGTTG 100 64
 C1I96_11700 NONE
 C1I96_11695 2688941 .. 2688967 - -13.8   -3.5393   ATTATTTCCTTCAAA         GCAGTTCCGC ATACATG GCGGAACTGC         TTTTTTATTGTCAGC  91 159
 C1I96_11655 2678104 .. 2678123 -  -9.2  -2.75562   ATAAACCGGGCAAAG            GGGGAAGG TTCA CCTGCCCC             AGCGTTCCGTAATGC  65 15
 C1I96_11650 2677121 .. 2677143 -  -4.6  -3.75505   CGTGAAAAAGGACAA           CGGCGGCCGC CTG GCGGACTTCG           TCTTTCAGTGCACGG  57 463
 C1I96_11640 NONE
 C1I96_11635 2673751 .. 2673762 -    -3  -5.41143   CATCCCGCAAAAAAA                GATA CCGG TATC                 TGCGTATTCGGATTT  80 181
        pyrE NONE
 C1I96_11585 2662129 .. 2662151 -  -6.2  -4.41348   TGCCGCGGAAATAAA           TCTTCCGGGA CAT TCCCGGCATA           TTCTCAGGCAAAAAC  72 58
 C1I96_11570 2654970 .. 2654994 - -10.7  -4.66163   ACGGGCATGCAAAAA          CCGGGCGGA ACATCAG TCCACCCGG          TTTTTGCAACCGCCC 100 91
 C1I96_11415 NONE
 C1I96_11410 2616654 .. 2616669 -    -9  -2.60496   CGCCCTGGGAAACAT              TGCGGA TACC TCCGCA               TCCGGTCACCTTTCC  63 31
 C1I96_11400 2615063 .. 2615100 - -12.8  -4.62069   TCCGTAGTCTAAAAA   GAGGGCCGATTGCACGA TCAGC TCGTGAAACCGGCCC-C   AATCATATTCCTAGG 100 51
 C1I96_11395 NONE
 C1I96_11390 NONE
 C1I96_11385 2612080 .. 2612105 -  -9.7  -5.07652   CTTCTTAAAAGAAAA         CCCCGCAAGCC TTTA AACTTGCAGGG          TTTATTAATGGTACA 100 34
 C1I96_11370 NONE
 C1I96_11365 2607597 .. 2607625 - -11.7  -2.78049   ACGGAGGAAAACGCA        TCCCTTGATTCCG TGA CGGAAGCAGGGGA        GCCTTCCTGTCCATT  76 64
 C1I96_11360 2603478 .. 2603492 -  -3.4  -5.42259   TTACGTGGAAAAAAA               GCGCCG CGT CATCGC               AAACGTTCCTGGTAA  81 457
 C1I96_11355 2602169 .. 2602196 -  -2.6  -4.59853   CTAACCGTTGAAAAA        TTCCCACAG-GGC TTG GCGGCGGCGGGAA        AATTGGATAGGGAAT  65 135
        cas4 NONE
 C1I96_11325 NONE
        cas2 2593326 .. 2593345 - -13.6  -2.53911   GCAAGTTTCAATCCA            CGCACTCC TTGC GGAGTGCG             ACGCAACCGACTTTA  84 228
 C1I96_11300 NONE
 C1I96_11295 NONE
 C1I96_11290 NONE
 C1I96_11285 2584402 .. 2584427 - -20.5  -4.33105   CAATGACTATTAAAA         GCCCGGCGGAA AGCA TTCCGCCGGGC          TTGCTTTTTATGAGA 100 67
 C1I96_11275 2583238 .. 2583263 - -10.4   -5.7946   GCCGGAACAAAAAAA         GAGCGCCGGA TTCTCG TCCGCCGCTC          CTGTTAATCAAGCTC 100 59
 C1I96_11270 2582720 .. 2582746 - -12.3   -3.7574   GGCATCATGAAAATA        CCCGGC-CCCCT TTGC AGGGGAACCGGG         CGCTTTAACCATACG  88 51
 C1I96_11255 2579993 .. 2580018 - -20.5  -2.85987   ATGTAAAACACACCA         GAAGCGCCGGG TTCG CCCGGCGCTTC          TCTTTTCTACGGAAA 100 328
 C1I96_11220 NONE
 C1I96_11215 NONE
 C1I96_11210 2572703 .. 2572737 -   -33  -4.42386   CCCTGATGGACAAAA     GAAGCCCCCGCCGGCG CAA CGCCGGCGGGGGCTTC     CCATGCGGAAAAACG 100 103
 C1I96_11165 NONE
 C1I96_11160 2557686 .. 2557711 - -11.3   -4.8622   GCCGGGAAGCAAAAA         CCGGAAAAATA ACGG TATTTTCCCGG          CAGGGCATCCGTTCT 100 89
 C1I96_11155 2557310 .. 2557334 -  -7.7  -4.29106   CCGGATACTAAGAAA          TGGCGGGACGG CCG CAGCCCCGCTA          TTGGTGAAATAAAGA  75 61
 C1I96_11150 2556008 .. 2556034 -  -9.3  -3.16742   TTTAAGGGTTACCAA         CCGTACCGGGC CTTCC GCCCCGTCCGG         GACATTCAGCGGTCA  67 31
 C1I96_11145 2554369 .. 2554409 - -13.5  -3.28309   ATAGACATAATTCAA TAATGATGGCGTG-GGGA TTCATT TCCCGCACGCCGTCATTA  CATCGTGAAAGCACA  91 127
 C1I96_11140 2553260 .. 2553270 -  -2.4  -4.08692   GAAGCTTGCGGAAAA                 GGGG CTC CCCA                 CGGACGACGAACACT  56 361
 C1I96_11125 NONE
 C1I96_11120 2548909 .. 2548936 - -12.6   -3.1506   AAACTGCTCCATGAA        GGACGGGGCGGC CCTG GCCGCTCCGTCT         TTTTTATGCTTCAGC  84 70
 C1I96_11100 2543808 .. 2543823 - -11.8  -5.15969   TCCGAATGCAAAAAA              GCCGCC CGGA GGCGGC               TGTTTTTCCTGAACA 100 44
 C1I96_11095 NONE
 C1I96_11090 2541779 .. 2541809 -  -8.3  -3.56837   TGCTAAAGAGTAGAA      CACGATTCC-GCAC AGCG GCGCAGGAACCGCG       GTCAGGAGATGAACG  69 27
 C1I96_11085 2540523 .. 2540541 -  -8.2  -2.79796   TTTCATTCCATCAGA             GAGAAACA TCA TGTTTCCC             CCTTCTTAGCGCCTG  62 31
        ruvC 2539488 .. 2539503 -  -4.7  -3.44527   CACGGATGACTACAA              CCAGA GCCAGT TCTGG               ATAGGCAATTTTCCG  52 518
 C1I96_11065 2536625 .. 2536648 -    -3  -4.22375   ACACCATTGAAGAAA          CGCTCTTCCG CTTC CGGGACAGCA           TGAAGGAATCCGGAT  61 221
 C1I96_11000 2523985 .. 2523995 -  -4.6  -4.06904   CCAGTTAAGCACAAA                 GCCA AAG CGGC                 TTGTACTGTAGACAC  62 226
 C1I96_10995 NONE
 C1I96_10990 2522078 .. 2522102 - -12.9  -4.56597   CCCGCTGGTGAAAAA          GCTTTCCGCCC TGC GGACGGAAAAC          CCGGAACTGGCGCAA  95 380
 C1I96_10980 2518294 .. 2518321 - -20.6  -4.72272   CCCTGTCATGAAAAA        GCGCCGCCGTCC CGGA GAACGGCGGCGC         CCGAACACGCTAACC 100 51
 C1I96_10970 2516802 .. 2516825 -  -7.4  -2.52946   TTCCTTCATAAAATT          TGACGGGCAA GAGC TTACCCGTCC           CCCCCGCCAGCGTCA  56 162
 C1I96_10965 NONE
        pheT 2513182 .. 2513220 - -18.9  -5.65496   CATGAAAAATAAAAA   GCAGGCCGCGCGTTCCA GCTCA TGAAACGCGCGGCCCGT   TAACGGAGGTTACCT 100 35
 C1I96_10955 2511681 .. 2511697 - -12.3  -3.68222   CGCCAACCGGAACAA              TCCTGGC CCA GCCAGGA              GGAAGTGCGCTCCGG  79 475
 C1I96_10945 2509886 .. 2509915 - -18.7  -3.17075   CGCCCCCCAACGCAA       CAAGGGCTGAACC TGAC GGTCCAGCCCTTG        CCAATACGGAATTGA 100 57
 C1I96_10930 NONE
 C1I96_10925 2506036 .. 2506051 -  -5.4   -2.6296   GAAATGCCAATTAAG              GCCCAT GGCT ATGGAC               GAGAATGCCCCATTT  48 18
        proC 2505102 .. 2505151 -    -5  -4.55295   TCCGGTACAAATAAA GGCTCTCCACCAGGCCGTCCTTTC CGGA GAAAGC-CGGCTCCG-GGAAAGCC AGAAGAAGCATCCGT  71 40
 C1I96_10890 NONE
 C1I96_10885 2493403 .. 2493427 - -15.8  -5.00616   TCCGCCCGCAAAAAA          GAGGCCGGAT TTTTC ATCCGGCCTC          TCGCAACAGGTATTT 100 64
 C1I96_10880 2492343 .. 2492371 - -16.1  -5.25893   AGAGACATTAAAAAA        TCGCCTGCAAGGC TGG ACCTTGCAGGCAA        AAACGCCTTTAACTG 100 58
 C1I96_10875 2491246 .. 2491280 -  -2.9  -3.72576   CGGCTTTCTATCAAA     GCGGAAGCATTTT CAAAAGGAT AAAATGCGTCAGC     CACAGAAAGGAAAAT  51 55
 C1I96_10870 2490096 .. 2490112 -  -5.1  -2.57132   TGTTGTGCGTATAAG              CTCATGA TGG TCATGGG              TTGGAAAAAGAATTA  48 38
         pgi 2488510 .. 2488538 - -17.6  -5.45802   CCCGGAAAAGAAAAA        CGGACGCTTATC AACCG GATAAGCGTCCG        CCGAATATTATATGC 100 49
 C1I96_10860 2488192 .. 2488208 -  -3.7  -2.87881   GAATTGGTGGACATA              TCGATTA TTG TAGTCGA              ATTAATGATTCTGCC  43 83
 C1I96_10855 2485394 .. 2485419 - -19.1  -4.58395   CCCATCCGCTAAAAA         GCCCGTGGTTC CGAA GAACCACGGGC          TGTCTATTAACCCTT 100 52
 C1I96_10830 2476579 .. 2476594 -  -4.7  -3.64703   GTTCCGCCATTGAAA              GGGAA TCTTTC TTCCC               TGCCCCGCCGCTTCC  57 101
 C1I96_10820 2475103 .. 2475122 -  -4.2  -4.52857   AGCGTTCACATAAAA            TCCATGCC TCCA GGAACGGA             ATTCTCCGGGGGAAA  68 149
 C1I96_10780 2465868 .. 2465885 -  -4.1  -4.47888   GGAAGGTAAAAACAA             TCAGACA TTAA TGTCTGC              GGCGCCTTGCCAGAA  65 15
 C1I96_10765 2463598 .. 2463626 - -17.6  -4.54727   TCCGGCAAAGGAAAA        GGCCTTAAAGCG TTAAC CGCTTTAAGGCC        TTTATTTGGTGGAGC 100 32
 C1I96_10750 2460329 .. 2460376 -  -4.1  -5.09895   CATTCATCCAAAAAA CGGCATGTTCGTCCG-GCAGAA AACCA TTCCGCACGGAAGAACAGGGAG AATCCGCCTGAATGT  77 249
 C1I96_10745 2459796 .. 2459812 -  -2.2  -4.03995   CCGGTCATAAAAAGA              TCCATC AACGG GAGGGA              GGAGGTTCCGGGCAC  55 13
 C1I96_10740 2458794 .. 2458810 -  -4.3  -4.15854   AAACTTACCGGAAAA              CCCACGA TTT CCGTCGG              CTCTGTGGGGCTTAA  61 311
 C1I96_10725 NONE
 C1I96_10720 2455151 .. 2455171 -  -7.5  -2.78816   GCATGCTGTACTACA            CGGACGTGT ACA ACAAGCCCG            TCCAGGAATACTGGC  54 379
        pepT 2446385 .. 2446403 -    -3  -3.62597   CTTATTCCCGAATAA             CGGAATCG CAA CACCTCCG             CTTACCGCCATGTTC  51 43
 C1I96_10685 2444666 .. 2444697 - -14.4  -5.26316   GGACGGCATAAAAAA      TACAGACGCCGTCC GAAA GGGCGGCGTCTGGA       AAAAACGCGTGCGCC 100 71
 C1I96_10680 NONE
 C1I96_10675 2442925 .. 2442940 -  -5.4  -4.12947   AAATGAATTAAAGAA              TCAGAG CGTC CCCTGA               CTGGAATTCCGGAAC  64 2
 C1I96_10665 NONE
 C1I96_10660 2438377 .. 2438402 -  -5.3  -5.30575   GAAAAAGTGAAAAAA         GGCCGGAGTCC ATAG AGAATCCGGTC          TTTTGGAAAGGATAG  85 67
 C1I96_10655 2437400 .. 2437413 -  -3.9  -4.87291   GATGTCAATTAAAAA               TTAGT TTAA ACTAA                CTTTGCAACAAAAAA  74 127
 C1I96_10650 2435961 .. 2435997 -  -5.1  -2.52795   AACCTCCGGAATTCA   CTATTGCCCAG-GCGG CCGCTC CCGCTCCGAGCACCAG    GACAGCCGCAGGTTT  48 182
 C1I96_10645 NONE
 C1I96_10640 NONE
 C1I96_10635 NONE
 C1I96_10630 NONE
 C1I96_10625 NONE
 C1I96_10620 2429500 .. 2429556 -  -4.2  -4.86621   ATCCTGAATGAAAAA GGGCCGCACGCCTCTGCCGCTCCAGCC GGGA AACGGAAGCAT-AGGGTCGTGCGGCCT GCTTCGTGATGAATA  74 53
 C1I96_10615 NONE
 C1I96_10610 2426813 .. 2426825 -  -6.3  -2.94924   CCTGCATTGATAAAT                GATGA AAT TCATC                TGCCATATTGCAGTG  55 140
 C1I96_10605 NONE
 C1I96_10600 2425451 .. 2425462 -  -7.2  -5.00884   ATTCCGGTGAAAAAA                GCGG GAGA CCGC                 TGGATTGCCGACCCA  86 149
         lnt 2420428 .. 2420438 -  -8.2  -3.28712   CTTTCTGGTGGAGAA                 CGGC TCC GCCG                 TAAAAGGGCTTAACG  66 270
 C1I96_10565 NONE
 C1I96_10560 2417135 .. 2417155 - -12.5  -4.08767   CCTATCCTCTGAAAA            CGCTGGTGG ACC CCACCGGCG            CGGGGGATACGTTCC  91 267
        crcB NONE
 C1I96_10545 2415570 .. 2415597 -  -6.2  -3.72324   TATTCCTAGGAATAA        GCC-GCCGGGGAT CCC ATGCCGGGCTGGC        TACCGCCCGCCCGGC  61 25
 C1I96_10510 2407703 .. 2407714 -  -7.2  -5.96894   ATTGAAAGAAAAAAA                GGGG ATGT CCCC                 CATTTCCGGCCCCCT 100 62
 C1I96_10495 2404784 .. 2404796 -  -4.9  -2.87683   ACATGGTTGCACATA                TTGTT GTG AACAA                TATGTAAATATAATG  47 95
 C1I96_10490 2404213 .. 2404229 -  -3.6  -4.29176   ACAGGCAAGGCAAAA              CAGCAG GACGA CGGCTG              AATTTTTCTTCCTTG  60 89
 C1I96_10485 2403642 .. 2403676 - -13.7  -4.72272   TTTTTTCAGGAAAAA    GCGCTTCCTCC-AGAC GTTC GTCCCGGAAGAAGCGC     TCTTTTGAGGATAAG 100 64
        aroA 2397320 .. 2397335 -    -6  -3.55801   ATCAATCCCGTTAAA              CCCCGC CAGT GCCGGG               ATTTTCCCAACAAAT  58 190
 C1I96_10440 2395212 .. 2395248 -  -8.8  -2.83409   GACGAAGCCATGATA   CAGGGCCGTTTTGCATC CCCG GA-ACAGAACAGCCCTG    CGATGAATAGCGGTT  62 50
 C1I96_10425 2391570 .. 2391592 - -14.9  -2.67021   TCCGTAAACAGGAAC           CGCACCGGA GAATT TCCGGTGCG           TTTGAAAAGATGAAT  90 54
 C1I96_10420 2388953 .. 2388971 -    -3  -2.54523   GTATATGGTAATGGA             TGTTCAGG TCC CCTGGACG             GGGGCTCCGCCGGGG  40 10
 C1I96_10415 NONE
        queC 2387630 .. 2387647 -  -8.3  -3.12351   GCTTTTGAGACGGAA             GCGGGCC TGGC GGCCTGC              CGCAGCGTGTTTGCA  60 218
 C1I96_10395 NONE
 C1I96_10390 NONE
 C1I96_10385 2382911 .. 2382941 - -15.5  -5.38047   CATGGAGACAAAAAA      CTGCCCTCCGCACC GTGT GGCG-GGAGGGCAG       TCCGGATGGAAAAAG 100 56
 C1I96_10375 2380852 .. 2380877 -  -6.8  -4.20918   TGTAATCGGAACAAA         TGCCAGTGCC GCCAAT GGCACGGACA          ATGTTGTGATAGGTT  71 490
 C1I96_10340 2374300 .. 2374313 -  -2.3  -4.15453   CAATTCATGTTAAAA               TGCCG CCGC CGGGA                ATTCCAGCTATTTGA  57 77
 C1I96_10335 NONE
 C1I96_10325 NONE
 C1I96_10320 2367567 .. 2367593 -  -3.8  -2.51815   CCGAAGGAGGAAGAG        TCCG-TCACCT GGCTTA AAGTGAACGGA         GAGGACAAGGAGCTT  41 507
 C1I96_10295 2364265 .. 2364292 -    -9  -4.62302   GAAGATGTGTAAAAA        GACCGCCTGACC CGGA GGAAAGGCGGCC         TGTAAAAGGAAAAGG  90 53
 C1I96_10290 2362846 .. 2362857 -  -2.2  -3.92694   GAAAATCAGACGAAA                CTGGC AAA GCC-G                ATGTCCGGCCGGCGC  52 4
 C1I96_10285 NONE
 C1I96_10280 NONE
 C1I96_10275 NONE
 C1I96_10270 2358450 .. 2358460 -  -2.4  -3.91911   GGTATTGTAAGCAAA                 GAGC ATA GCAC                 TTTGGGGAGGTTTTG  52 124
 C1I96_10265 NONE
 C1I96_10260 NONE
 C1I96_10255 NONE
 C1I96_10250 NONE
 C1I96_10245 2351276 .. 2351286 -  -5.4  -2.95449   AAAAAGAAGTTAAAG                 GTTG GCG CAAC                 GGGGGCAGGCTTCCA  51 9
 C1I96_10240 2350131 .. 2350141 -  -6.8  -3.41051   TTACGTGTAGGATAA                 TGCC GGG GGCA                 TGGTGATTAAAAGCT  59 128
 C1I96_10230 2348701 .. 2348727 - -10.9  -5.19879   TTCTAAATATAAAAA         CACCCCGGAAT ATTGA ATTCTGGGGTG         TTTAGAAAAATGGTA 100 36
 C1I96_10225 2347517 .. 2347528 -  -5.8  -3.21925   AGACGTGATCAGCAA                CGCA GACA TGCG                 GGCGGAGCATACGGA  55 134
 C1I96_10220 NONE
 C1I96_10215 2344995 .. 2345014 -   -15  -2.81173   ATGAAGTTGACGACA            GCTGCCCC GTGC GGGGCAGC             TTTTTTATTCAGTGA  90 91
 C1I96_10175 2336479 .. 2336492 -  -2.4  -4.25458   AAGTTTATGAAGAAA               GCAT GAAGGA ATGC                ATGGAGCGGAAAACA  57 118
 C1I96_10165 2335431 .. 2335461 -  -7.5  -3.22491   AAACTGTACCAGGAA      CCGGATC-CCCACC CTTT GGCGGGAAAGCCGG       CGGTGTGTTCTTAAC  60 61
 C1I96_10150 NONE
 C1I96_10145 2328573 .. 2328587 -  -2.8  -3.51958   ACTGCGAAAGAAAAG               CTTTTC GCG GAAACG               GGACTTTCTGCCATG  49 91
 C1I96_10140 NONE
 C1I96_10135 NONE
 C1I96_10130 2325916 .. 2325945 - -17.9  -4.56597   TGGGTCCGTTAAAAA       CGGGGCGGCTGAA CTGC TCCAGCCACCCCG        TTGAAAAAGGGAGTT 100 39
 C1I96_10120 2321179 .. 2321198 -  -3.5   -4.4261   GTTGTAATAGCAAAA            CTGCCGT CTGTGT AAGGCAG             GGCGGAACCGGAAAG  63 59
 C1I96_10110 2319448 .. 2319460 -  -3.3  -3.53811   GTGACGGCGTGTAAA                GGATG AAG CAGCC                GATGTCTGGAAGCTC  50 283
 C1I96_10090 2315497 .. 2315527 -   -24  -4.85782   TCCCTGAAAAAGAAA       GTCGCCCCGGCCGT AAA ACGGCCGGGGCGCC       CCAACTACCCTATGA 100 238
 C1I96_10080 2314918 .. 2314930 -  -7.7   -3.6003   GAAAGCACCCTGAAA                TTCCG CTA CGGAA                CGGGAACTCCGGAGG  63 222
 C1I96_10060 2309104 .. 2309134 - -20.6  -5.19212   ATCATCATTAAAAAA       GAAGCCGCGCTTCT GGC AAAAGCGCGGCTTC       TGATTGCATGCAAAG 100 193
 C1I96_10040 2304600 .. 2304610 -  -6.8  -4.57073   TATGTCCTGCAAAAA                 TGCC AGC GGCA                 AAACGGTAGGCGGGA  76 153
 C1I96_10030 2302867 .. 2302915 - -15.3  -3.48807   TGATTAAAGTCAGAA CGGCCTGAACCTCATTCCGGA AAAACAG TCCGGAATGGAGAACAGGCCG TTTCTTCAATTTGCG 100 54
 C1I96_10020 2301637 .. 2301684 -  -7.8  -4.15884   GGAAGCAAATAAGAA CGCAGA-G-CGGCCGGGATTCC TCATTG GAAATCCCGGCCGACGTCTGTT GAGGATTTAAGGGAG  75 44
 C1I96_09955 2289827 .. 2289839 -  -7.7  -2.78596   CATGGCTTGATGATA                CACGA TTT TCGTG                AATTGTCGATAGAAA  59 89
 C1I96_09950 2288932 .. 2288944 -  -7.7  -3.54424   TCCGATTTCCGGAAA                CAGGA GTT TCCTG                TCCGCTTTTCTGCGC  63 89
 C1I96_09940 2287001 .. 2287016 -  -5.4   -2.6176   AATTTCATTGATAAG              CCGCAT TTTG ATGCAG               TTCGGCAGAGCGGGG  48 425
 C1I96_09930 NONE
 C1I96_09925 2284792 .. 2284810 -  -5.8  -4.93296   GCAGTACTATAAAAA             GGTGGTGG GAG CCCCCTCC             ATGGTCTTTCTTCCG  82 236
 C1I96_09900 NONE
 C1I96_09895 NONE
 C1I96_09890 2279204 .. 2279235 -  -4.3  -2.62579   TGCGGAAAAGAAAGG      GGGCTGCCTACTG TTGTTC CAGTAGGCGGACG       ATCCAGCAGAAGGAA  44 1
 C1I96_09885 NONE
 C1I96_09880 NONE
 C1I96_09875 2276341 .. 2276362 - -12.9  -2.70298   GGCCTGAAGGATAAG           GGCGGGCGC GGAA GCGTCCGCC            TTCCTGCCGTCACGG  81 35
 C1I96_09870 NONE
 C1I96_09865 NONE
 C1I96_09860 NONE
 C1I96_09855 NONE
 C1I96_09850 2268753 .. 2268793 -  -6.2  -3.85698   TGCGGCTGTGAGAAA GCCGCCCTTTCTGGGGAATA CGG CATTCCCG-GAGAGG-CGGC TCCAGAAAAGGGGCG  64 56
 C1I96_09815 2258452 .. 2258470 -  -3.1  -4.26903   GTCATGTTACTAAAA             CCTTATC TGGAC GATGAGG             TGTAGACCAACTTTA  59 103
 C1I96_09790 NONE
 C1I96_09785 2250984 .. 2251000 -  -3.6  -3.36823   GCGGCGAAAACGGAA              CTCCGG AAAAA CAGGAG              GGAAGGGGAGCTTTT  48 39
 C1I96_09780 NONE
 C1I96_09775 2249636 .. 2249648 -  -3.3   -4.4078   TCTGTCCAACTAAAA                TCACG AAG CGGGA                GCGTACGAGCGGCCG  63 13
 C1I96_09770 2247849 .. 2247864 -  -4.6  -3.29511   GTGATTGCGCCAGAA              GGGGAG TGAC CTCTCC               GGAGAAAGGGAAAGA  52 43
        hprK 2243895 .. 2243909 -  -4.2  -3.31501   AGTAAGGGGTGATAA               CGGTTG CTA CAACGG               TAAGTACACTAATTA  50 71
 C1I96_09745 NONE
        ptsP NONE
 C1I96_09735 2239883 .. 2239940 -  -9.3  -2.79212   AAGGGAATAAAAACG GGAAAGCCGCACCATACTCCCTGTTTTC TTA AAAGAAAAGG-GAATAATGCGGCTTTCC AGGGAGGGATGGAGA  65 46
        argF 2238931 .. 2238951 -  -6.8   -3.4072   GATTGGGTAGGATAA            GCCGGG CGGATTATC CCCGGC            GGGCGTCTGCAAGCG  59 15
 C1I96_09725 2238492 .. 2238504 -  -3.3  -3.93166   TCTGGAAAAAATCAA                TGGTG TTC CGCCA                TTTTTATGGCGGCCT  55 9
 C1I96_09720 2238018 .. 2238047 -  -9.2  -2.66695   CCGTCCATGAAAGAG       GCGTGCGGTACG GGCCTG CGTACCGGGCGC        GGGATGAATAGGCGC  63 71
 C1I96_09705 NONE
 C1I96_09700 2231225 .. 2231238 -  -6.7  -2.53876   CTTTATTCCAATGCA               GTAGC CACC GCTAC                GGCAGCCATAGGAGC  50 330
 C1I96_09675 2226435 .. 2226447 -  -2.6  -3.21934   GCTTTTGTACAAAAT                GCCC GGAGG AGGC                TCAAGCATTATCAGC  45 91
 C1I96_09670 2225023 .. 2225050 -  -6.2  -3.06737   GAGGAAGCGGGAATA        TGGCGTTCAGGC TCCG GCATAAACGCCC         GGGAGGATTTCCTTC  53 4
 C1I96_09665 NONE
 C1I96_09660 NONE
 C1I96_09650 NONE
 C1I96_09645 2220860 .. 2220870 -  -4.6  -3.91506   TGAGCGTGAAAAATA                 CCCC ATG GAGG                 AACAACTTTTGCCTC  59 93
 C1I96_09640 NONE
 C1I96_09635 2218813 .. 2218846 -  -9.7  -2.94422   GATTGGTAAAAAGAC     GGGCATACACTTC GGATGATT GAAGTGTATGCCT      TATGCTTTATATTGA  69 32
 C1I96_09595 NONE
 C1I96_09590 NONE
 C1I96_09585 2206272 .. 2206285 -  -3.7  -2.55061   ACAATGCCATAACAG               GCCGG CTTC CCGGG                GCATCCTCAGTTATG  42 32
 C1I96_09580 NONE
 C1I96_09575 2203732 .. 2203743 -  -5.8  -2.64794   GGCAAGCGTATAGCA                TCCC GGAC GGGA                 TATTACAGGGATGTC  51 129
 C1I96_09570 2202535 .. 2202551 -  -2.9  -4.67755   AGAGCCAGTTAAAAA              CGGGTAA TAT TCAACCG              TTTGGCATGCCACCT  68 149
 C1I96_09565 2201453 .. 2201468 - -11.8  -3.05614   AAGAAAACACAAGGA              GGGGGG GCCA CCCCCC               AAAGGCCTTCCTCCT  78 297
 C1I96_09545 NONE
        xseA 2190948 .. 2190960 -  -4.8  -2.90901   ATATTCTCAAGCAGA                GCTG AAAAA CAGC                TTCTGCAGAACCTTC  47 507
 C1I96_09510 NONE
 C1I96_09500 NONE
 C1I96_09495 2182250 .. 2182273 - -13.9   -5.1861   TTTATCATGAAAAAA          GCGCCTTCC GGCAAG GGAAGGCGC           TGGATATGAAAAGGT 100 55
 C1I96_09475 2177879 .. 2177902 -  -8.2  -5.43414   AGTAGAGACAAAAAA          TCCCGCCATGA TGT TCA-GGCAGGA          ATCATTTTATTTGCT 100 55
        ssrA 2177444 .. 2177485 - -12.5  -4.82901   GCGGTTCTATAAAAA CAACAACCGCAAGCCTT GTTTTTCA AAGACTTGCGGTTGTTT  TGAAATGGTGGAGGC 100 31
 C1I96_09435 2170939 .. 2170967 - -18.3  -4.77173   CTTCTACAAAACAAA        GTCCGCAGGATCA AGA TAATCCTGCGGAC        TGTATGACGGGAAGG 100 57
 C1I96_09430 2170186 .. 2170204 - -10.3  -4.76802   CTGAAAAATAAGAAA             GACGGCA TTGCT TGCCGTC             CCAGCTGCCGCAATA 100 208
 C1I96_09425 2169648 .. 2169671 -  -9.6  -3.95772   AAGAACAAACGGAAA          CCTGCCCCAT ACTG ATGGAGCAAG           CGCCGTTACAGACCC  77 159
 C1I96_09415 2168500 .. 2168510 -  -3.2  -3.26042   TCAGGCAAAAACAAT                 CTCC CCG GAAG                 CCCTTTTAAAAAAGA  46 114
        trpB 2167157 .. 2167192 -   -17  -2.71011   AGCCTTGCGTAAGGA    TGGCGTATGAAGGATG ACGG CACCCTTCATACGCCG     AAAATGAGGAAAGGC 100 48
 C1I96_09405 2166181 .. 2166193 -  -6.3  -3.23708   GGCTGGGAAAAATCA                TGCTA GCA TAGCA                GCCAGCGGTTCTGCA  57 10
 C1I96_09400 NONE
 C1I96_09395 NONE
 C1I96_09390 NONE
 C1I96_09385 2162210 .. 2162224 -  -2.8  -3.04515   AAAGAGGGGTGAAGA               TTAGTC TTT GACAAA               AGGAACCTGGAGTTT  43 11
        cydB NONE
        sucA NONE
        sucB 2156893 .. 2156903 -  -2.6  -3.93262   GCGCAACAGACGAAA                 TTTT TTG AAAA                 TACAGCGGTTTTAGA  54 336
 C1I96_09365 2155955 .. 2155966 -  -7.2  -4.30014   GGGAGTAAGCCAAAA                CGGC TCAT GCCG                 CATTGAAGTACGGAA  73 189
 C1I96_09350 2151952 .. 2151979 - -10.5  -5.03314   TCCATGCGCAAAAAA        GGCGGTTCCGC AGTATA ACGGAGCCGCC         GGAAGACCGTAATAA 100 57
 C1I96_09330 NONE
 C1I96_09325 NONE
        cobD NONE
        cobT NONE
        cobS NONE
 C1I96_09305 NONE
 C1I96_09300 2137758 .. 2137776 -  -5.2  -3.14132   TCTTTTCCTGACTAA             CGGGAGAA CCG CTCTCCGG             GCGTTTCAGCCTTTT  52 31
 C1I96_09295 NONE
 C1I96_09290 2137223 .. 2137247 - -11.4  -4.66938   ACTGGTAATAGAAAA          CCCTGGGAGC GTTTA GCTACCAGGG          TTTATTGATTGGTAC 100 35
 C1I96_09275 2134824 .. 2134836 -  -6.3  -4.16146   AAAATATTCTGAAAA                TCTTG CGA CAAGA                CTATTCTGCATAATT  71 399
 C1I96_09260 NONE
 C1I96_09255 2130073 .. 2130085 -  -4.8  -2.67244   TGATAGTCAAACCTA                TCCG CAGCC CGGA                GGGATGTCAAACATT  46 10
 C1I96_09250 2128646 .. 2128672 - -12.2  -3.06815   ATCCTTTTCAAGAGA         CCGGGCGGGG AGAAGAG CCCCGGCCGG         ATTTTATCTGCAAGA  74 100
 C1I96_09235 2127142 .. 2127166 -  -8.5  -5.14563   CGGGGTATGAAAAAA          TTCTGGATGCC CTG GGCATCCGGCA          CGGGGAAAAGGAATA  93 107
 C1I96_09225 2123612 .. 2123622 -  -6.8   -4.0492   GAATCCGGAGAGAAA                 GCCA ATT TGGC                 TGTATTGAGGCCCTG  68 390
 C1I96_09205 2113624 .. 2113643 -  -7.8   -3.7282   GGAGTTGATCAACAA            GTTCCGCA CGTT TGCGGAGC             AAGCCGTAGCCGAGG  67 194
 C1I96_09190 2109543 .. 2109569 - -16.6  -5.28176   GGGAGGGATAAAAAA         CGCCCCGACG GATATGG CGTCGGGGCG         TGACAAGGGTTAAAT 100 66
 C1I96_09180 NONE
         rpe 2104119 .. 2104135 -    -5  -3.10796   CCTGATGACGGAATA              CCGGGG ATGGA CTCCGG              CGTTTCAGGGCGGAT  50 77
        rpsT 2096025 .. 2096053 - -15.3  -5.20781   GAGTAGAAAATAAAA        CAAGCCGCTCAGC AGA ACAGAGCGGCTTG        CCATAAAGAATCGTC 100 60
 C1I96_09145 2095728 .. 2095747 -  -9.2  -3.01712   GTTTTTTCCGTAACA            CGGCGCAG TTGC CTGGGCCG             CGGAAGAAAGCATAG  66 64
 C1I96_09135 2093322 .. 2093333 -    -3  -3.61764   TCATGAACGTTGAAA                TTCA TACC TGAA                 TTCCGGGAGGGAGAC  51 15
 C1I96_09130 NONE
 C1I96_09125 2091211 .. 2091235 - -17.2  -3.28712   TCTTCCTGTTCACAA          GCCGTACCGG TTTTT CCGGTACGGC          TTGTTTATGGTTTCA 100 107
 C1I96_09065 2073075 .. 2073087 -  -4.8   -4.4009   GTCTATCTTATAAAA                CGTC CACAT GACG                CTATTTTGCTCTCCT  67 215
 C1I96_09060 2070706 .. 2070731 -  -8.2  -4.61482   CCTCGGAAAAAAGAA         CCCCGGTTCCC TGAAT GGGG-CCGGGG         CGGCAAGGAGGTTCG  83 55
        rpiB 2068843 .. 2068871 - -17.5   -4.2558   GACTTTTGATGAAAA        GGCCGTTCCGC GGTAAAG GCGGAACGGCC        TGAAAAGCGTTTATA 100 52
 C1I96_09025 NONE
        rimO 2059660 .. 2059672 -  -3.3  -3.21934   GCCTTTGCAGAAAAT                CCGGA AAG TCGGG                CGGAAAACAGGAGGC  46 111
 C1I96_09010 2056728 .. 2056754 -   -13  -5.38047   CACGGATAGAAAAAA         GGGCACGTTTCC TTC GAAAGCGTGCCC         TTTTTGATACTACGG 100 65
 C1I96_08990 2052128 .. 2052144 -  -8.7  -2.70298   GCCCGTAAGGAGAAT              CACATGC CGG GCATGCG              GGCTGGTTTTTCCTG  59 181
 C1I96_08970 2048189 .. 2048199 -  -2.4  -4.56597   GCTGGTGGTGAAAAA                 GCCC TGA GGGA                 AAATGGCTATTTGAC  63 32
 C1I96_08960 NONE
 C1I96_08955 NONE
 C1I96_08950 NONE
 C1I96_08945 NONE
 C1I96_08940 NONE
 C1I96_08935 NONE
 C1I96_08930 NONE
 C1I96_08925 NONE
 C1I96_08920 NONE
 C1I96_08915 NONE
 C1I96_08910 2035046 .. 2035057 -  -5.8  -4.95806   AAATCAGGAGAAAAA                CTGG AGCA CCAG                 CGTGGGGAAGAAGCC  81 2
 C1I96_08905 2033302 .. 2033321 -  -3.7  -3.70902   TGGGGGACAGGCAAA            TAATTAG GACAGG CTAATTA             CGTTTGGCCTGGGGG  53 305
 C1I96_08900 2031900 .. 2031914 -  -6.4  -4.58283   GAAGCCCTGGAAAAA               TCCCTG TGG CAGGAA               TGCGCCAGATACGGC  75 470
 C1I96_08885 NONE
 C1I96_08880 2027050 .. 2027063 -  -3.7  -4.83169   AGCTCTGGAGAAAAA               CGAGG CGGC CCGCG                AAATTCTGTGGCTAC  72 297
 C1I96_08870 NONE
 C1I96_08865 NONE
 C1I96_08860 NONE
 C1I96_08855 2021577 .. 2021592 -  -3.2  -4.13561   GTTGTTCAAAAAACA              GGAACC TCGG GGTTCT               ATTTTTCTTCTTGTA  58 64
 C1I96_08850 2020706 .. 2020733 - -10.5  -5.10077   AAATACGTTAAAAAA        CGGCGCGGACT ACAGAA AGCCCGTGCCG         TTTGGGGATAGGAAA 100 62
 C1I96_08845 NONE
        mviN 2017937 .. 2017948 -  -5.8  -3.05384   CCTCCCTCTATGGAA                GGGA TTTT TCCC                 GTCAGCATTTCAGGA  53 27
 C1I96_08835 2016567 .. 2016591 - -11.4  -4.86621   ATCCGGAAGTAAAAA          GGCGTTCCGC TTGAC GTGGAACGCC          TTTTTATGGTGATCA 100 48
 C1I96_08830 2015899 .. 2015923 - -12.2   -5.4505   TTCGGGAAGAAAAAA          CGGCTTCACC TTTTG AGTGAAGCCG          TTTGGCAAAAGCTGA 100 50
 C1I96_08825 2014653 .. 2014669 -  -3.6  -2.75294   CCAAACCTGCGAAAT              CTCCCG GAAAG CGGGAT              TTTTCCTGTTCTCAG  43 37
 C1I96_08820 NONE
 C1I96_08815 NONE
 C1I96_08810 NONE
 C1I96_08805 2009047 .. 2009075 - -17.5  -3.91897   CCCTCCATGCACAAA        GCCTTCCTCCACT GGA AGGGGAGGAAGGC        TGCCGGAAAAGAAGC 100 66
 C1I96_08800 NONE
 C1I96_08795 2007094 .. 2007123 - -13.5  -2.54193   CATCAGGTTAATTGA       GGGCCGCAGCTGT AATA ACGGCTGTGGCCC        TTGCCGTTGCGAGGC  84 109
 C1I96_08780 2005026 .. 2005042 -  -2.2   -3.6328   GAGAGATATAAAAAC              GGTTCC TGCTC GGAATC              AAGCCTATATTACGG  50 35
 C1I96_08775 2004667 .. 2004691 - -17.1  -4.37527   GGAGAAGGATGAAAA          GGCCCCGGGCT GGG AGACCGGGGCC          TGGCCGGATAGAGAG 100 90
 C1I96_08770 2004153 .. 2004180 -  -7.6  -2.76696   GCTTCCGGGAAGAAG        CGGACGGCAACC GCAT GGTTGCCGCTTG         ACTTACCGGCGGTTG  59 28
 C1I96_08760 2002469 .. 2002503 - -21.6  -2.72049   GACAGGTTTTAATCA     GGAAAGGCGCCGGA TATTACT TCCGGCGCCTTTCC     TGCATCTGCCTTCCG 100 410
 C1I96_08740 1999465 .. 1999482 -  -4.1  -2.78679   GGTGCGCATGGAAAC             TCCTTTC TGTT GAAAGGT              TGGATTCCTTTTCTC  45 82
 C1I96_08735 NONE
 C1I96_08730 1998133 .. 1998143 -  -5.4  -3.15544   CGTCATCGGCAGCAA                 TCAG AAA CTGA                 CAGGTTATGGCGGGG  50 255
 C1I96_08715 1995429 .. 1995453 -  -3.6  -4.03995   GCCGCCAGAAAAAGA         GCGGAAAAGAA TCTG TTCATT-CCGC          CAGACTACTTCCAAG  58 158
 C1I96_08710 NONE
 C1I96_08705 1987603 .. 1987617 -  -3.4  -3.06796   GTTCATGGCAGGGAA               GCAGGA TCC CCCGGC               AAGGGGGAAAGCGGA  45 224
 C1I96_08700 NONE
 C1I96_08695 1981531 .. 1981542 -  -5.8  -4.20883   GAAAAAGCGGGAAAA                CGGA GTTG TCCG                 GGAAGAGGGGGTTAT  69 37
 C1I96_08660 1972448 .. 1972464 -  -6.5  -3.14132   TGGCGCGTCTACCAA              TTTCGCC ACA GGCGCAA              CGAATGGGCGGACGC  57 503
 C1I96_08655 1971906 .. 1971916 -  -8.2  -4.10453   GAAAGCGTGGTAAAA                 CCCG GTC CGGG                 GCTGGTGCAGATGGG  73 487
 C1I96_08635 1966962 .. 1966972 -  -5.4   -4.8622   CTGGTCAATGAAAAA                 TCCA ATG TGGA                 TTACCGGAACGCTGG  80 469
 C1I96_08620 NONE
 C1I96_08615 NONE
        pflB NONE
        pflA 1958370 .. 1958380 -    -4  -3.53343   AAGCCTTGCGGGAAA                 TTTC CGG GAAA                 GAATAATCTGGGAAG  52 279
 C1I96_08595 1955957 .. 1955981 - -13.5  -5.52384   TGGTCAGCAAAAAAA          GACCGGCACCC GGC GGGCGGCGGTC          TTCTTGAAATCTGTG 100 53
 C1I96_08590 NONE
 C1I96_08585 1954055 .. 1954080 - -20.5   -3.6715   TCAGCCAATTGGAAA         GCCGCTGCGGA ATCA TCCGCAGCGGC          TTTTTTCATGAATGG 100 95
 C1I96_08500 1927851 .. 1927863 -  -4.7  -4.62302   CAATACTCTGAAAAA                GCGCC TCG GCCGC                AAGCCTCCCATGGGC  71 125
 C1I96_08490 1926054 .. 1926068 -  -7.2  -3.81954   GGCAAAATAAAGGAA               TCCTTT CTG AAAGGA               GGTCTGGCCGGAGGG  69 81
 C1I96_08485 1924238 .. 1924265 -  -2.6  -4.14243   TACGGCAGGTGAAAA        CCGCCGGTCCGCA TTC TGCGGAAAAG-GG        AGTGCATGGGGGCTT  59 116
 C1I96_08455 NONE
 C1I96_08450 1914835 .. 1914861 -  -4.4  -4.53034   TCCATATAAGGAAAA        GTGCGG-GCAT GATGGA ATGCGCCGCTC         CTCAGGTCAGAAGAA  71 209
 C1I96_08440 1914596 .. 1914609 -  -3.7  -4.63218   TTTCCCTGAATAAAA               GGGGG TAAG CCGCC                GGCCCGTTGGGGAGC  66 63
 C1I96_08420 1910587 .. 1910614 -  -5.5  -2.74756   AAACCACGGGAATCA        CCCATGCGGGA AAGGCG TCAGGCATGGG         TGGGCGGGGAATAGG  48 15
 C1I96_08415 1909252 .. 1909265 -  -2.3  -3.53224   GATGCGTTTCGGAAA               GGAGC GTGC GCTGC                GGTGTTTCAAACAGG  47 256
 C1I96_08410 1908013 .. 1908038 - -18.3  -4.79352   TCAGGCATAAGAAAA         CCCCGCCTGCC GTTA GGCAGACGGGG          CCGTATCTCTGGTTT 100 67
 C1I96_08390 1902424 .. 1902450 - -11.6  -4.49337   CTACAAGGCAGAAAA         GCGCACCACG GCAGAAT CGTGATGCGC         TGTATAAGGAATGAA 100 59
 C1I96_08385 1901271 .. 1901294 - -19.6  -4.67641   ATCTCAAAAGCAAAA          CCCCGGACCG CAGG CGGTCCGGGG           CGGCTCCCTTTTTCC 100 70
 C1I96_08375 1900005 .. 1900018 -  -2.4  -2.73701   TCCCAGCAAAGGAAG               GAAG GTCAAT CTTC                TATTGATGAGTTCCA  39 63
 C1I96_08370 NONE
        menA 1898291 .. 1898304 -  -6.7  -3.22298   CGGATTCATGATGAA               CGTAG TTAA CTACG                CTGGCGGGGTTAAGC  57 46
 C1I96_08360 NONE
 C1I96_08355 1896744 .. 1896780 -  -6.3  -2.72991   TCAGACGCTGAAGGA    CCGGGGCGTGCTGTACC CCT GTTTCTGTACGCGCCGG    GAGATTGCGGAGGAG  53 493
 C1I96_08345 1894181 .. 1894192 -  -5.8  -3.96216   CCTCTAGGCAAAGAA                CCTC GGAA GAGG                 TGTCCCGGTAGGTCA  64 293
 C1I96_08325 1890313 .. 1890325 -  -6.2  -3.44527   CACTGATGACGATAA                GGGC GAACA GCCC                CAGGCAGAGGTTCCA  59 295
 C1I96_08320 1888480 .. 1888495 -  -3.2  -3.54424   TGTGATCGGCGGAAA              GGTCCA TGCG TGCACC               TGCCGGGCAGGGATG  50 67
 C1I96_08315 NONE
 C1I96_08310 1886060 .. 1886081 -  -7.2  -3.73042   TGCTGGATGAAAAGA           CCCAGGGG GAAGTT CGCCTGGG            AGGCATCGGCAAGGT  67 407
 C1I96_08295 1883597 .. 1883612 -  -7.5  -3.24598   AAGAAATTATCAAGA              CCGCC TGCGTG GGCGG               GCAAACGCCGTTAAC  60 122
 C1I96_08290 NONE
        pdxA 1882398 .. 1882417 -    -2  -3.81503   CGAAAGAAGAAAAAC            GTTAACGC GTCT GCGCCATC             TGTACGGCCAGCTGG  52 7
        rpsF 1881606 .. 1881631 -    -9  -5.60689   GTACATAAGAAAAAA         GAACCGCCCC TTCACG GGAGCAGTTC          TTTTTGGTGAAAAGC 100 74
 C1I96_08250 NONE
 C1I96_08245 1874901 .. 1874926 -    -4  -3.61398   CCGCCTGGGGAAGAA         GCATGCAGCCT TTTTC AAGCCGC-TGC         CTCCTGGCTGGAAAG  52 72
 C1I96_08235 NONE
 C1I96_08230 1872198 .. 1872214 -  -2.2  -2.79098   GCTATTCATGAAGTA              CGGCAT TCATG ATGCCC              CGTCCGGAGGCGTCA  40 58
        lepB NONE
 C1I96_08220 NONE
 C1I96_08215 1867620 .. 1867638 -  -5.3  -3.66178   CTTTCCAAGGCCAAA            CCGG-ACA TGAT TGTTCCGG             ACCTGCTTGTTCTGC  56 445
 C1I96_08180 1862250 .. 1862263 -  -6.7  -3.27298   TTTTTCAAGGATGAA               CAGGA TGGT TCCTG                GAAGCTGGACTGGCA  56 509
 C1I96_08170 NONE
 C1I96_08165 NONE
        uvrA 1857587 .. 1857613 -    -3   -4.3078   AAGGAGACGAATAAA         CTCCGGGA GGCAGATTTTT TCCCGAAG         ACGCCGGGAACGGGA  59 87
 C1I96_08155 NONE
 C1I96_08150 1854878 .. 1854896 -  -6.6  -3.19463   TGCATGATTTATGAA             GGCAGGCC GTT AGCGTGCC             GCACTCATTTCTGCG  54 288
 C1I96_08130 1852003 .. 1852043 - -16.3  -3.72302   CGCAGAGCAAAAAAG  TTTGAGGCCTTGCAGAATA CTT CATTCTGCAAGGCCTCACG  AATGGGAAAATGGTC 100 36
 C1I96_08125 NONE
 C1I96_08120 1848882 .. 1848916 -  -8.6  -3.53012   CTTTCTCCCCTGAAA    GCCCC-GATGAAGAG CTGACT CCCTTCCTCTGGGGC     ATTATCAAAGAAATA  64 488
 C1I96_08100 NONE
 C1I96_08095 1845261 .. 1845273 -  -6.2  -2.83449   AGAGGCGGATAAGTA                CGCC CGTCT GGCG                AAAGTACGTTTTGAC  49 80
 C1I96_08085 1844185 .. 1844195 -  -5.4  -3.71998   CATTCAGGAATACAA                 TGTG TAC CACA                 ATATGGGATCCTGGT  59 129
 C1I96_08060 1835060 .. 1835090 -   -11  -4.06505   CGAATACATGACAAA       GGCCTCCGGTGCGT TGA ATGTGCCGGAGGCC       TTTTACATATGGGGA  87 72
 C1I96_08045 1832840 .. 1832865 -  -6.1  -4.87133   ACGGTGTAAAGAAAA         CCGCCGC GGGGTGGGAGGT GCGGCGG          AATGGAGAAAATGAT  81 58
 C1I96_08025 1830838 .. 1830863 -  -9.8  -5.27335   GCCTGCAAATAAAAA         CCCCGTTTTCC GGGAA GGAAA-CGGGG         TTGGAAAATTGCTGA 100 50
        tilS 1829322 .. 1829355 -  -9.8  -2.78508   CACGGTGGAAAATAT    GGCCTATTTT-GCCGT AGAG ACGGCCAAAAT-GGCC     CGCCATATGCTGGGT  63 447
 C1I96_08010 1827716 .. 1827734 -  -7.3  -3.06315   GGAATACGGGGAACA             GGCCGCC CGTGC GGCTGCC             GCCAAGGCCTGCCGG  59 69
 C1I96_08000 NONE
 C1I96_07995 NONE
 C1I96_07990 NONE
         mfd 1818528 .. 1818565 -  -4.7  -3.66772   GGAAAGGGGCAAGAA   CTGTTTTCCCATGGGTG AATT CAGCCACGGGATGACCG    CAGCGGATTTAAATG  57 34
 C1I96_07965 1814886 .. 1814904 -  -5.8  -4.36914   CCCTGGTTGAGAAAA             CCGGGACG AAC CGGGCCGG             GGAATTAGGATTGAT  72 350
 C1I96_07910 1804393 .. 1804420 -  -5.7  -5.92399   CAAGAAAACAAAAAA        CGCAAGCT-TTG ATAAA CAATAACTTGCG        GAACAAACTGGTACG 100 33
 C1I96_07875 1794283 .. 1794302 -  -4.8  -3.96337   TGAAAAAGGAGGAAA            GGCGCGTC TGTT GTCCCGCC             TCATTCTTCCGTTTT  59 192
 C1I96_07870 1792718 .. 1792731 -  -5.2  -3.05384   TTTTGTGGCAGGGAA               GCGG TGGAAC CCGC                TTCCCTGCCGGTCCG  51 132
        hisS NONE
 C1I96_07830 1783608 .. 1783635 - -15.6  -5.14563   TTCTGCATGAAAAAA        CCCCGGATGGAA TGAT TGCCATCCGGGG         TTTTGTTTGAAGATT 100 45
 C1I96_07795 NONE
 C1I96_07765 1768960 .. 1768970 -  -6.8  -3.01712   GCCGCTGGCGGAACA                 GGCT GGA AGCC                 CGCGATGGAGAATAG  55 311
 C1I96_07750 NONE
 C1I96_07745 NONE
 C1I96_07740 NONE
 C1I96_07735 NONE
 C1I96_07730 1759920 .. 1759942 -   -10  -3.14344   TATTGCCGGGAGTAA           CCACTTTCTT TCA AAAAAAGTGG           TAGGCCCGGTAGGAA  70 23
 C1I96_07715 1755593 .. 1755611 -  -6.1  -3.55444   TGCTCATTCCTGAAA             CAATATC TTGTG GATATTG             CCGTTTTTAAGGGGA  59 73
 C1I96_07710 1754828 .. 1754864 -  -6.5  -3.22448   GGAAAGTCAAGCTAA    TCCCCCCTGTTTCCC GGCACGG GGGAAACAGGTTGGG    CTGAAAGGCGTATCC  57 194
        fabF 1753443 .. 1753488 - -24.9  -5.37593   TTTTAAATGAAAAAA GCGGAAGCGC-GATGGCTGCGG TGG CCGCAAACATCAGCGCTTCCGC CGGAAAGGAGAGGCC 100 49
 C1I96_07700 NONE
 C1I96_07695 1752107 .. 1752131 -  -3.6  -5.60993   TTTTGTAGAAAAAAA         GAAC-GCTTCCC TGA GGGA-GCTGCTC         AAGCCGGGCGACCGG  89 268
 C1I96_07675 1747790 .. 1747816 - -15.1  -5.14563   GCGGGGATGAAAAAA         GGCCGTTCCCC GGAGA GGGGAGCGGCC         TTGAAATATTGCCGG 100 49
 C1I96_07670 1746672 .. 1746691 -    -3  -3.50746   GGGGCAAAAAGAAAG            CAA-AAAGA GAT TCTTTATTG            ATTTTTCTCCGGAGG  49 20
 C1I96_07665 NONE
 C1I96_07660 NONE
 C1I96_07655 1744631 .. 1744652 -   -13  -5.49234   AGACTCAATAAAAAA           CGCAGGCG GCGATG CGCCTGCG            CGGTATCCGGCGATG 100 303
 C1I96_07640 NONE
 C1I96_07635 NONE
 C1I96_07630 1741413 .. 1741442 -  -7.9  -2.78505   GACAAGGGAATATTA       TTTTTCCGCGTAT GGCG ATACGCGGAGAAG        ACGTGAAATTCTTCA  54 511
 C1I96_07605 1736452 .. 1736477 - -19.1  -4.36914   TTCCGGCGGAGAAAA         CCCTTGCCGGA AGGT TCCGGCAAGGG          TTCTTATTTATGTTA 100 54
 C1I96_07600 NONE
 C1I96_07595 1734497 .. 1734517 -  -3.2  -3.65201   CAACAGGCTGAATAA           GCGTCCGCG CATC CG-GGAGGC            TGCCTTGGCGGATCC  50 394
 C1I96_07580 1731945 .. 1731990 - -15.4  -2.69545   GGCAGAGAGGAGAAG TTGAAGGGCAGGACTCCGGC GGGTGG GCCGGAGTCCTGCCCCGGCA TGTGTTTACGGCACG  95 53
 C1I96_07575 NONE
        pstA 1727791 .. 1727802 -  -2.2  -3.30338   AGAATGGGGTTAGAA                GCTGG AGG CC-GC                GTACTTTTTGCGCAG  45 8
        pstB NONE
 C1I96_07560 1726260 .. 1726270 -  -2.4  -3.18728   ATGGGCAACAGGGAA                 TCGC CGT GCGG                 GCAGGAATTGTTTTA  43 38
 C1I96_07555 NONE
        cysK NONE
 C1I96_07545 NONE
 C1I96_07540 NONE
 C1I96_07535 NONE
 C1I96_07530 NONE
 C1I96_07525 NONE
 C1I96_07520 NONE
 C1I96_07515 1716853 .. 1716865 -  -9.1  -2.98508   TTAATGAAAATATTA                TGCCG TTG CGGCA                GAGGAGGGCTGAATG  66 192
 C1I96_07460 1692657 .. 1692682 - -14.7  -2.55267   AAATAGTTCAAGCCA         GGGCCGTTCCC GGGA GGGAACGGCCT          TTTTGTTTTTGTCTG  89 101
 C1I96_07445 NONE
 C1I96_07440 NONE
 C1I96_07435 NONE
 C1I96_07430 1686468 .. 1686478 -  -5.4  -2.81786   CATACCTAATATAAT                 CCAT CAT ATGG                 CAAAAAGATGATGAA  49 160
 C1I96_07425 NONE
 C1I96_07420 NONE
 C1I96_07415 1682637 .. 1682659 -  -4.8  -2.83403   CTCCGCGGAGGAAAG           GCTCCATCCG AGG CAGATGAAGA           TGATTATATGGAGAA  47 117
 C1I96_07410 1681616 .. 1681626 -  -2.4  -4.59773   TTTGATCCTGAAAAA                 GGCC CAT GCCC                 GCATGATAGCCGGAG  63 145
 C1I96_07405 1680721 .. 1680746 -  -8.9  -3.32946   TTCCGAATCAGAAGA         GCCGTTCCGCA TTTT TGGGGGACGGC          TTTTTGAAAAATGCA  69 65
 C1I96_07395 NONE
 C1I96_07390 NONE
        trxB 1677783 .. 1677793 -  -6.8  -3.55622   GGGAAGGGCCGGAAA                 TCCC GCT GGGA                 ATTCCGGCCCGTTCC  61 52
 C1I96_07380 1676256 .. 1676271 -  -4.6  -4.89852   CCAGAGCGAGAAAAA              GGCGTG AAAG CATGCC               CGCACCCTACCTTTG  77 124
 C1I96_07375 1675525 .. 1675549 - -14.3  -4.75309   TGAAAGGCAACAAAA          CAGGCTCCCGA TTT TAGGGAGCCTG          TCTTTAAAGGAAAGA 100 55
 C1I96_07370 1674343 .. 1674369 - -12.3  -5.18355   CTTAAAAATGAAAAA         CTGTCCGGGGT GTAGA ATCCCGGACAG         TTGTTGAAAAACGGG 100 60
 C1I96_07365 1673226 .. 1673240 -  -5.7  -3.44848   GGTGTGGAGGAAACA               GGTCA GCGGT TGACC               AGCAATTCCGCGATT  59 13
 C1I96_07360 NONE
        nadC NONE
        pdxH NONE
 C1I96_07345 1669648 .. 1669660 -    -2  -3.55145   AATCATTAATGATAA                TACT TATTC AGTA                AGGAAGGGGGATACT  48 272
 C1I96_07325 1665577 .. 1665596 -  -3.5  -4.11484   GGGAACGCGCCAAAA            GGCTCGG AACATA CCAAACC             TTAAAAGAGACTTTT  58 60
 C1I96_07320 1663411 .. 1663435 -  -2.1  -3.01416   TATGATTGATAGACA          GTGTTTTTCTA TTC CAGAAAAGCCC          GCCTGCTTTACAGAA  42 33
 C1I96_07315 1662978 .. 1662990 -  -2.6  -3.17051   TGTTGACGAGTAAGA                CGCA TCTCC CGCG                GGTCGGCCCGTGAAA  45 82
        rnpA NONE
 C1I96_07305 NONE
 C1I96_07300 1660256 .. 1660283 - -18.5  -4.32436   ATATGACGAGGAAAA        CCGGCCCTCTC TATCAG GAGAGGGCCGG         TTTTTTGCAGGATTT 100 168
 C1I96_07290 1652558 .. 1652572 -    -7  -3.33696   CGCCGGGGGAATTAA               GTGCCC GCG GGGCTC               CGGAGGAAAGTTTTT  62 204
        carB NONE
 C1I96_07280 1648045 .. 1648083 -  -6.8  -4.98352   ATGAAATAAAAGAAA  CCTCT-CCCGGAGCCGCA ATTCA TG-GGCTCCGGGCATAGA  TAATGCATTTTTCCC  83 88
         gmd NONE
 C1I96_07270 1645835 .. 1645847 -  -5.5  -4.08216   GGATCTGGCCGAAAA                GTCAG TTG CCGAC                GGCTTCCATCCGGCT  64 14
 C1I96_07265 1644452 .. 1644462 -  -2.4  -2.91061   CGGTAACAAAAAAGG                 CGCC CTT GCCG                 TCCTTTCTCCGTATG  40 47
 C1I96_07260 1643074 .. 1643097 - -16.8  -4.41494   GACGGGCAAGCAAAA          TGCCCACAGG GTTT CCTGTGGGCA           TGGAGAGAGGAAGAC 100 54
 C1I96_07255 1642058 .. 1642076 -  -3.8  -2.80589   GAAAAAGTGTGAAAG             CTTCAGCA TTG TGCCGAAT             TCTTCGCTCTTTTTG  45 55
 C1I96_07250 1641230 .. 1641240 -  -6.8  -2.62184   CGTTGCCTGATATCA                 GCTG ATG CAGC                 GGTAATAATAATCCA  53 12
 C1I96_07215 NONE
 C1I96_07210 1631820 .. 1631843 - -12.4  -4.07568   TTCTTTCTCGGAAAA          GGAGCGCTCC CTGT GGAGTGCTCC           TTTTTTGTTGCAGAA  95 185
 C1I96_07195 1630125 .. 1630148 -   -11  -5.15969   CTTTAAGCTAAAAAA          CCTTCTCCTG CAAG CCGGAGAAGG           TTTTTATAAAAGGAG 100 56
 C1I96_07190 NONE
 C1I96_07185 1627736 .. 1627746 -  -6.8  -4.07687   ACGTGGGCTTTAAAA                 CCCA CCG TGGG                 TTCGAATCCCACTCT  68 131
 C1I96_07165 NONE
 C1I96_07160 1622922 .. 1622932 -  -4.6  -2.69545   GTGACAGATTAGAAG                 CCCA TGC CGGG                 AGGGAGACCCAAGCC  46 8
 C1I96_07155 1621833 .. 1621843 -  -8.2  -3.21099   TTTCCTGAGGAGGAA                 CGGC GTT GCCG                 TGCTGTAAGGGGTAT  64 44
 C1I96_07135 1616192 .. 1616228 -  -7.4  -4.26188   GGCACATAGCCAAAA   TTCCGTCCTCAGAAAAC TCCT GCTTCCCGAAG-CGGAA    TGGTCAGCCTACACA  73 196
 C1I96_07130 1615503 .. 1615534 - -18.8  -5.00616   CCCTCGCCGAAAAAA      GGAAGAAGGGGGGG ATTT CCCCCCTTTCTTCC       TTGAAAGATGGCATG 100 51
 C1I96_07090 1606098 .. 1606117 -  -3.6  -3.40878   ATGAGGCGAAGAAGA            CGCATT CTCCTTTT AATGCG             TTCTTGTCCTGGGTG  48 18
        aroB 1604713 .. 1604728 -  -4.7  -4.86385   AGCCGTAAAAATAAA              TTCCC CGTGCC GGGAA               TTGGGTAATTACTAC  77 219
 C1I96_07075 NONE
 C1I96_07070 1601893 .. 1601903 -  -2.4  -4.43879   ATCATTTAATGAAAA                 GCCC TTT GGTC                 TTTTTATGACGCAGC  61 100
 C1I96_07065 1598643 .. 1598693 -  -2.5  -3.73756   CAGCTTATCAAAAGA CCTTTGACTGGTAAGGCCGCCTCC TGAA GAAGGCGGCCTTATTTTTTAA-GG AAGGGCCGTTTTTTA  50 62
 C1I96_07045 1593115 .. 1593141 - -19.5  -4.67982   TGCTATGGAATAAAA         GAGGCCGCCCT GTCAA AGGGCGGCCTC         TGCCTTAAGAGTTTT 100 61
 C1I96_07040 1592094 .. 1592120 - -10.2   -5.4505   TGGCGCAATAAAAAA         GCCGTTCCCT GGGAAGA AAGGAACGGC         TGGCATTAAAGGAGG 100 50
 C1I96_07020 1588586 .. 1588618 - -19.9  -4.86033   AAAGGGTGACAAAAA      GAGGCCCGGTCCCCA AGG TGGGAACCGGGCCTG      CCGGAAAAGGGATGC 100 48
 C1I96_07015 1587484 .. 1587495 -  -5.8  -3.54741   CAGGACCCGTTCAAA                GCAG GCGC CTGC                 TTCTGAAGTAAACCA  59 9
        argB NONE
 C1I96_07005 1585825 .. 1585839 -  -4.2  -4.09864   ATGCAGGCGGGAAAA               CTGTCT GCT AGACGG               GACCCATGATGAATT  60 332
 C1I96_06995 NONE
 C1I96_06990 NONE
 C1I96_06985 NONE
 C1I96_06965 1577407 .. 1577417 -  -2.4  -3.05647   TGGTAAGCATAGACA                 GGCG TTG CTCC                 TTTACTCTAATCCAT  42 32
 C1I96_06960 1576680 .. 1576696 -  -2.9  -2.72461   GAATGGGGGTTAAAG              GAAGGTC AGA GAGCTCC              GAAACGGCGTTTTCT  41 14
 C1I96_06955 NONE
 C1I96_06950 1574837 .. 1574861 -  -3.4  -3.40403   GGCCGCCTATGACAA         GCTGGCGAGCC TGAT GGCG-GCCGGC          AGGTTGAAGCAGGCC  48 335
 C1I96_06940 1573601 .. 1573621 -  -4.6  -3.77607   AACAACCGGACGAAA            GCCCTGGA ATTTA TCCTGGAC            TGTACGGAAGCATGC  57 15
 C1I96_06935 1573127 .. 1573141 -  -4.2  -4.64334   AATGTTTCAATAAAA               CCTTCA ACT TGGAGG               TGCCTCACTTAAGCA  68 143
 C1I96_06930 1572756 .. 1572785 - -19.4  -5.07486   TATTTGTAATAAAAA       GAACCGCTCCGG GAATCT CCGGAGCGGTTC        TTATAAAAGAGATTG 100 75
 C1I96_06905 NONE
 C1I96_06900 1565802 .. 1565815 -  -6.7  -3.25823   GGCCGGTGATATGAA               GTACC TGCT GGTAC                CGGACCGCGCTCCGC  56 356
 C1I96_06850 NONE
 C1I96_06830 NONE
 C1I96_06825 NONE
 C1I96_06820 NONE
 C1I96_06815 1547177 .. 1547195 -    -6  -2.94045   GGAGGGCAAGAACTA             TTCCCG TTCCCTG CGGGAA             TTTCCCGGTTTCTGG  53 4
 C1I96_06810 NONE
 C1I96_06805 NONE
 C1I96_06800 1541843 .. 1541876 -  -8.7  -3.31196   GGAAATGGACAGGAA     CACGGC-GGCCGGGGG GCT CGTCCGGCCCGCGGTG     GAGATGCCGTGTGGT  65 86
 C1I96_06785 NONE
 C1I96_06780 1538486 .. 1538496 -  -2.4  -3.36492   GGCGGAACTGGAGAA                 CGCC GTA GCCG                 CCATACCCGTGACCG  44 312
 C1I96_06745 1531622 .. 1531635 -  -4.5  -2.78816   GCAGTTTCCATTATA               GCCTCC CCG GG-GGC               GTTTTCCGTTACCAT  47 34
 C1I96_06695 1520714 .. 1520735 -    -3  -4.17491   ATGAAAGCGCCAAAA           CCGT-GGTG GAATG CACCTACGA           CTACATGGGCAGGCG  58 295
 C1I96_06605 NONE
 C1I96_06600 1495962 .. 1495996 - -16.6  -3.72576   TTCGGGCGCACCAAA     CAAGGCCCTGCAAG TTAACTG CTTGCAGGGCCTTA     CTGGTTTTATGATGT 100 450
 C1I96_06585 1493856 .. 1493869 -  -5.2  -3.16088   ACATGTCATGAAAAT               GGGG GTAATG CCCC                GGGTCAGCTGAGCGG  52 29
 C1I96_06580 1492090 .. 1492107 -  -4.1  -4.49311   AGCAGCAGGAGAAAA             CTTCTTC TCCG GAAGAGG              AACGGGATTCCGAAG  68 316
        galE 1487650 .. 1487676 - -14.5  -4.63993   AATTTGAAAAAACAA         GCCCTGCCATG GAGGG CATGGCAGGAC         GGAAAAGAGGGTGGC 100 59
 C1I96_06550 1485670 .. 1485695 -  -7.7   -4.7629   GCATCAAGGCAAAAA         CTCCCGCATTTC TGA AAAATG-GGGAG         AATTGCCCTGTACAG  85 115
 C1I96_06545 NONE
 C1I96_06540 NONE
 C1I96_06535 1482055 .. 1482065 -  -2.4   -4.0825   GTCTTAAGGAAAGAA                 GGGC TGC GCTC                 TCATTTCTTTTCCAT  55 26
 C1I96_06525 1478020 .. 1478067 - -10.5  -2.68886   TGAAGGAATAAGGTA CCCGCAAGGTGCGGAGGCCG TGATTGTGG CGGCCTCCGC-CCGCGCACG GAAAATGCGTTCAGG  69 36
 C1I96_06510 1473377 .. 1473391 -  -4.2  -5.15969   CCGGAATTGAAAAAA               TTTCCG GTC CGGGAA               CTGACGCCGGAGCAT  81 417
 C1I96_06500 NONE
 C1I96_06495 NONE
 C1I96_06490 1466315 .. 1466333 -  -3.1  -2.70354   GCCGTTAGAAATGCA             TGAAGGA TCAGT TCCCCCA             GAACATATAAATATA  41 14
 C1I96_06485 1465701 .. 1465731 - -15.5  -3.28323   AAAAATCTGATAAGA       GACACCCGGCAAG TGTAG CTTACCGGGTGCC       CAAAAGAATCTCTAT 100 169
 C1I96_06480 1463671 .. 1463683 -  -7.7  -2.60496   GCCGTGCCGAAATAG                CCAAG GCT CTTGG                AGTCCAAACCACCGT  53 454
 C1I96_06470 1462695 .. 1462718 -   -11   -3.0782   TAAGTTCTGAATATA          CCCCCTTCCC CGAA AGGAAGGAGG           TCAGTTAATTCACCG  74 50
 C1I96_06465 NONE
 C1I96_06460 1460710 .. 1460724 -  -2.2  -4.13767   TTTCGTATTCTAAAA               TTTTAA TAA TCAAAA               TCGAATTCTCTTTGA  55 13
 C1I96_06455 1458580 .. 1458617 - -19.5  -3.40597   TCTGGCATCCAAACA   CAAATAGGCCTGCAATT ATTT AATTGCAGGCCTATTTA    AATTTATTAAATCAT 100 70
 C1I96_06450 1456453 .. 1456483 - -17.2  -4.46072   TCTAATAAATAGAAA       GAGTGAAAGTAATT GCA AATTACTTTCACTC       TTAGTATTCAGACTA 100 107
 C1I96_06440 1455402 .. 1455441 -  -2.7  -3.91911   CTTATCCCAACCAAA  TTTCAGCCGCCTTCCTCC TTAAT GG-GGATCGCGGCTGATC  CACCTGCCGTCGCGC  54 4
 C1I96_06430 1452764 .. 1452789 -  -2.5   -3.1247   ATGGCCGACATGGAA         CCGGAGTGTTAA GCC TTTTC-CTCCGG         GATGCGGCGTCCCGG  43 8
 C1I96_06425 1451430 .. 1451446 -  -2.3  -4.61873   TTCCAGAAAGGAAAA              TTTGC GCAACAA GCAAA              CCTTCTATTTAAAGG  63 61
 C1I96_06395 1444402 .. 1444412 -  -8.2  -2.74192   TATTTGCGAAGAGTA                 CCGG GAG CCGG                 ATTCCCCCTTCTCCA  57 195
 C1I96_06380 NONE
 C1I96_06375 1439269 .. 1439283 -   -10  -2.82516   TCTTGCAGGAGGAGA               TCAGGG AAT CCCTGA               ATGTTTTCAGTTCAT  68 383
 C1I96_06365 NONE
 C1I96_06360 1434760 .. 1434792 - -26.5  -4.03234   CTTCTGGGATATAAA      GAGCGGGTGAAAGGG TTA CCCTTTCACCCGCTC      CAATATGGACGTTAT 100 50
         rho 1432644 .. 1432670 - -13.7  -5.61596   ATCCTGATAAAAAAA         CCTCCGTGCCG GCGGG CGGAACGGAGG         ACGGGGGAAAAACAG 100 56
 C1I96_06340 NONE
        lipA 1427856 .. 1427866 -  -2.6  -3.56985   GATAAAAAATCAAGA                 TTTA TTC TAAA                 GTTCGCCAGCCTTTC  49 21
 C1I96_06330 1426362 .. 1426391 - -22.3  -5.22039   GGGAAATGCAAAAAA       GCCGCGCCAATGA ATGT TCATTGGCGCGGC        TGGAAAAAGAGCTTT 100 50
 C1I96_06325 NONE
 C1I96_06320 NONE
        feoB 1423290 .. 1423301 -    -3  -2.78463   AGGGTGGCGATGATA                TATG TTCC CATA                 TTGTTCAGTAGAGTT  42 59
 C1I96_06310 1423055 .. 1423089 - -14.5  -3.40403   GGCGCCGTAGCAGAA     GAACCTGCAAACC GCAGAAAAT GGTTTGCAGGTTC     TGAATGGGATAACCG  93 51
 C1I96_06290 1419936 .. 1419967 - -15.9  -5.34655   TAAGGAAAAAGAAAA      GGGGGAAACGCCC TTCTCC GTGCGTTTCCCCC       GTTGGGGGCGGTCCA 100 99
 C1I96_06285 1417342 .. 1417357 -    -4  -3.78234   AGTTAAACCTAATAA              GCATCA ATCA TGATAC               ATGAAAAATTTTCCA  55 459
 C1I96_06275 1416897 .. 1416910 -  -2.3  -2.66316   GCCCGGAGGATATGA               TGGCC CGGA GGCAA                TTCTCCGCTGATTAA  39 109
 C1I96_06260 NONE
 C1I96_06255 NONE
 C1I96_06250 NONE
 C1I96_06245 1410109 .. 1410119 -  -6.8  -3.67597   GCGGCCATGGAAGAA                 GAGG CTC CCTC                 CCCGTTACCGGAAGA  60 239
 C1I96_06235 1406646 .. 1406664 - -13.1  -5.83211   GACGAAAATAAAAAA             GCGCCGG AAAAA CCGGCGC             TTGGAAAAGTGGTTT 100 53
 C1I96_06215 1401387 .. 1401407 -  -8.9  -2.52516   TGCTGGATGAGGAAG            TGGCGCGGC TGC ACCTCGCCA            AGATAGGGTGCAAGC  58 264
 C1I96_06200 1397916 .. 1397929 -  -3.8  -3.28188   AGGAAAATGGATTAA               GACG GCTGTA CGTC                ACGGTTTCCAGGCGG  50 24
 C1I96_06190 1396888 .. 1396899 -  -2.2  -4.56914   CCACGGAAAGGAAAA                TCAC TACT GCGA                 ATAGCATAGACGGTT  63 46
 C1I96_06185 1396218 .. 1396230 -  -2.6  -3.53012   TTTTTTTCTCCCAAA                GGCC GGTTT GACC                GGAAAAATGCGCTTC  49 57
 C1I96_06180 NONE
 C1I96_06175 NONE
 C1I96_06170 1393035 .. 1393064 -  -2.8  -5.18866   CGGAAACAAATAAAA       GCGGC-CGCCG TATTAAAGG CAGCGTACCGC       AGGAAACGCCCTTAA  77 62
 C1I96_06165 NONE
 C1I96_06160 NONE
 C1I96_06155 1386922 .. 1386955 - -16.8  -4.56597   CTGTTGCTGTAAAAA     GCGGAACCGGGG CTCATCCTCT CCCCGGTTCCGC      CGCCGGAGTCCTGAA 100 45
 C1I96_06150 1385816 .. 1385827 -  -7.2  -3.06796   GCTTACCGGATGTAA                CCGG GCTG CCGG                 TGTTAATCCTTATTT  57 414
         tig 1378991 .. 1379025 - -12.9  -4.35581   CCAAAAGATGCAAAA    CGGGGGAGTCGG-GCA TGTG TGCGCCAACTCCCCCT     GGTAAGGTGTTTTGT 100 53
 C1I96_06115 NONE
 C1I96_06110 NONE
        tsaD 1375595 .. 1375621 -  -9.4  -3.63305   TAGAGAAGTCGTAAA         TCCGCCCAAACC TGC GGTTCTAGCGGA         TAAATAGCATCCTCC  74 162
 C1I96_06100 NONE
         tuf 1374180 .. 1374207 - -17.1  -3.53012   TTCTTTCGTGGGAAA        TGAGGGGGCCT GCGGGG AGGCCCCCTCA         TTAAACCTGATGTAG 100 66
 C1I96_06090 NONE
 C1I96_06085 NONE
        nusG NONE
        rplK NONE
 C1I96_06070 NONE
        rplJ 1371325 .. 1371335 -  -6.8  -3.02144   CGAGTCGCGCCAAGA                 GCCA ACT TGGC                 ATTTCAGTTCTCCGG  55 135
 C1I96_06060 1370861 .. 1370897 - -23.3  -3.27923   TGTGAAGACGAGGAA    GCGCAACAGGAGAAAAA CGG CTTTTCTCCTGTTGCGC    GGGAAGTAAAAAGCT 100 40
        rpoB NONE
        rpoC 1362449 .. 1362476 - -18.4  -5.48787   AGAAGACATAAAAAA        GACCGCCCCCCG GAAA CGGGGAGCGGCC         CTTGAAGTGTGGGTG 100 52
 C1I96_06045 1356475 .. 1356514 - -24.6  -5.38054   TCCGATAAACAAAAA  CT-CAGAGCCGTTCCGGAA TTA TTCCGGAACGGCTCTGGAG  GGCCAGGAGGAAGGC 100 86
        lepA 1352519 .. 1352547 -  -4.7  -4.10007   AGAACCCCGGGAAAA       CAGTCTCTCCAT GTTCAA ACGGAGA-ACTG        ATATAAAACCGGGAG  62 87
 C1I96_06020 1352277 .. 1352304 -  -3.4  -2.84265   TAACAGGAAAAAATG        CGCAACCG-GGAA TTG TTCAACGACTGCG        GCGGTTTCAGTGTTT  43 32
 C1I96_06015 1351228 .. 1351246 -  -6.7  -4.25458   AAGCCCATGAATAAA            CCGTTCCG CAGC CGGA-CGG             CAGGGGAAAAGCCGT  71 41
 C1I96_06010 NONE
 C1I96_06005 1347546 .. 1347577 - -14.5  -4.66535   AAGCGGGAAAAGAAA     GCCGGGGATCCGCGG TTGT CCGC-G-TCCCCGGC      TTTGAAGAAATCAGA 100 64
 C1I96_06000 NONE
 C1I96_05995 1345498 .. 1345510 -  -6.9  -3.48024   TTCCAGCAGGAAATA                CAGGG TAA CCCCG                GTCAATCCCGCTCCG  61 257
 C1I96_05985 NONE
 C1I96_05980 NONE
 C1I96_05975 NONE
 C1I96_05970 1339434 .. 1339447 -  -3.8  -4.09739   GCAATGCCTGCAAAA               TGGC TGTTTT GCCA                GCTTCATTAGGTCCG  60 192
 C1I96_05960 NONE
 C1I96_05920 1328759 .. 1328794 -  -4.6  -4.65895   TTTTCCAGGGAAAAA    CCGCAGTGAGGGCACAA TGA TTCCGCCC-CACGGTGG    AAATTATGTAAACAC  71 124
 C1I96_05915 NONE
 C1I96_05910 NONE
 C1I96_05905 1326157 .. 1326177 -  -2.5   -5.1356   TTCTATGAAGAAAAA            CACCGGA AGATGGG TCCGGTT            TCTTGCCGGCGTCAT  73 37
 C1I96_05900 1325644 .. 1325672 -  -8.9  -3.42257   GGGGAAAGATAGGAA       GGCCCCCGATCT GTCTGG AGA-CGGGAGCC        GCGCCTGGCGTCCGG  69 67
 C1I96_05895 NONE
 C1I96_05890 NONE
 C1I96_05885 1323592 .. 1323610 -  -5.2  -4.16279   CAGACGACGGGAAAA             CCATCCGT GTG AGGGACGG             CATTCAAGCGCTTGA  64 251
 C1I96_05835 NONE
 C1I96_05830 NONE
 C1I96_05825 1309355 .. 1309370 -  -7.5  -2.71712   TTCCTGGCTGGAAAG              GGCGG AATTTG CCGCC               AGAGCCAGCACGCAC  56 97
 C1I96_05815 1306884 .. 1306905 -  -2.9  -3.05844   GGCTGGATGCCAAGA           TGACGGAAC AGCC GTGCGGTCA            GGGTCAGAGGTCCGT  43 178
        raiA 1305357 .. 1305388 -   -13  -4.57353   CGGCATTACAGAAAA      GAGCAGGACCCCCG GTTT CTGAAGTCCTGCTC       TTTTTGATGCGTTAT 100 75
 C1I96_05790 1302375 .. 1302409 -  -2.9  -4.93661   AGAGGAACAAGAAAA    GCCTTCATCCTG-TTC TTTT GAGGCAGGATGAAATC     CACGGCAAGGAAAAA  71 62
 C1I96_05780 1301784 .. 1301803 -  -4.9  -2.76261   CGGCAAGCTTGAAAT            GGACCTG GCCGCG CAGGACC             CCATATGGGGAAAGG  47 87
        fabG NONE
 C1I96_05770 1299480 .. 1299497 -  -6.3  -2.77344   GTATTCCGGAAGAAC             GGCAATGG GCC CCAT-GCC             CAGCACTTCATATTC  54 289
 C1I96_05755 1297155 .. 1297182 - -18.5  -4.50661   AACGGATAAGGAAAA        GGCCGGCTCAC GATTTT GTGAGCCGGCC         TTTGAATATAGGGAG 100 56
 C1I96_05750 1296460 .. 1296497 -  -5.8  -4.07568   TCTTCTCCTGGAAAA  TCCGGAGACATTCATGGGA CAG TCCC-CGAA-GT-TCCGGA  AAGTGTCGTCCCGCT  66 76
 C1I96_05730 NONE
        sdhA NONE
 C1I96_05720 1291676 .. 1291701 - -14.7  -5.68023   TGATAATGAAAAAAA         CTCCCGACAGC CGAT GCCGCCGGGAG          TTTTTACAGAGCGTC 100 58
 C1I96_05680 NONE
 C1I96_05675 1278672 .. 1278698 -  -5.9  -4.10925   AGACATGGTTGAAAA        GAGGCTGGCA AAACGCCA TGCC-GCCTC         TTATTCCTCTTCCAG  66 26
 C1I96_05655 1272290 .. 1272328 - -22.7  -3.53012   TCCCTTTCCCGTAAA  TGCAGGAAGCCGGCCTTT CTTC AAAGGCCGGCTTCC-GCA   TGGTAAAATGGTTAT 100 37
 C1I96_05620 1263014 .. 1263030 -  -5.1  -3.62046   CCATGCGCGGAATAA              CCTCC GCATGAT GGAGG              AACTGCGGCGCGCCG  56 349
 C1I96_05605 1260364 .. 1260374 -  -2.4  -3.49475   GTTATTGGGAGATAA                 GGTC CCG GGCC                 TTGTCCAGAATTTGG  47 1
 C1I96_05600 1258180 .. 1258234 - -16.5  -2.99849   GAATAAGGGAAAGGA CAGGGACGGAGGTTTCCTGGACGCCC GGAG GAGCGTGCAAGGAGC-TCCGTCCCTG TTGGATGATTTTTGT 100 47
        rbfA 1257499 .. 1257514 -  -4.6  -4.07568   GTCGCGCTGGGAAAA              GGCTCT CCGG AGCGCC               GGTTTCTGAGATTAA  61 248
 C1I96_05580 NONE
 C1I96_05575 1249126 .. 1249142 - -13.7  -3.32844   GCCCTGACGGGAGAA              TGGCGCG GGG CGCGCCA              ATGCGGGAAGGTTTT  91 90
 C1I96_05570 NONE
        nagA 1247115 .. 1247154 -   -20   -3.4158   GGTAAAAAGGAGGAA  GGCGCGCCGGAAGG-GGCG GGA CGTCTCCTTCCGGCGCGCG  GAAACGCGGTTACGC 100 35
 C1I96_05560 NONE
 C1I96_05555 1245336 .. 1245352 -  -7.9  -4.30014   CTGATGAAGTGAAAA              GGAGGAG ATT CCCCCCC              TTTCCCTGCTGTTCC  75 85
 C1I96_05545 1243996 .. 1244006 -    -4    -4.254   TGAATACTTAATAAA                 TTCA TAC TGAA                 AAGCAATATCAAAAA  62 34
 C1I96_05540 NONE
 C1I96_05535 NONE
 C1I96_05530 NONE
 C1I96_05525 NONE
 C1I96_05520 1238014 .. 1238027 -  -3.8  -3.64703   GGCCGGGGAGGGAAA               GAGC ATGGAG GCTC                CGTTCAGGCCGGAAA  55 169
 C1I96_05515 1236774 .. 1236813 - -15.1  -3.01712   GGTCCTCCGGGAACA GCCTCCGGAGTACG-CCGG TTTT CCGGCCGT-CTGCGGAGGC  TGCCCATGTTTCCCG 100 58
 C1I96_05440 NONE
 C1I96_05435 NONE
 C1I96_05430 1218797 .. 1218830 -  -8.7  -2.55213   GATCCAGGGAACGGA     GGGCACGCTGGCTGG TTTC CCAACCCGCGTGGCG      GGTGAAAAGCTGGGC  58 441
 C1I96_05420 1216571 .. 1216590 -  -7.2  -2.80821   CCTTCAAAGACATCA            TCTCCTTC TGGC GAAAGAGA             GCAGAATGGAGATCA  57 3
         ffs 1216423 .. 1216437 -  -3.4   -2.8919   AGAGCCATAAAATAC               CGCCGG GAA CAGACG               CGGCAAACACGAACA  43 10
 C1I96_05410 NONE
 C1I96_05405 1212306 .. 1212351 -  -9.8  -3.69437   GAATTCCAAAATGAA GAGCAAAACCAGCAAAGCTT TTCAAC AGGCGTTGCTGGTTTTGACC GGCAAGGAAAAAACT  72 282
 C1I96_05380 1205248 .. 1205274 -   -18  -4.56597   GGCTTCCGGGAAAAA         GGTCCGCTCCAG ACC CGGGAGCGGACC         TTGGCATTCAGCATT 100 244
 C1I96_05375 1204697 .. 1204710 -  -4.5  -3.27406   GCCGCAGGAGAAAAG               GCCCA GGCC TGAGC                AGGCCGTTTCCGCCC  52 183
 C1I96_05365 NONE
 C1I96_05360 1201562 .. 1201575 -  -3.8  -3.61398   GGCGCGGGGGAAGAA               GGAG GATTTT CTCC                GCCTGCTGGAAATGT  52 375
 C1I96_05350 1199703 .. 1199729 - -15.2  -3.04894   AAGGTTTGGGAAAAG         CCTCCCGGAAAA TCA TATTCCGGGAGG         GGCGGGTATTGGGAC 100 46
 C1I96_05340 1196631 .. 1196643 -  -4.1  -3.34398   GGTCCGTGGTAAATA                CGCTT CAT AAACG                CTGTATGGAGTCGCC  50 161
 C1I96_05335 1195479 .. 1195493 -  -3.5  -3.44792   AAGATTAATGGAGAA               GAAGG ATTGG CCTCC               CCTGCTTTTTCTCCG  50 43
 C1I96_05330 1195140 .. 1195158 - -14.6  -2.55999   CGATTGTACAGTAAT             GCCCGGAA AAT TTCCGGGC             GCTTTTCCGGAAGAA  89 57
        acnA 1191473 .. 1191511 - -12.3  -2.78384   CCGGTGCGGATGAGA   CGGACGGGGCCGCGCCT TCGGG AGGAAGGGGCCCGTCCG   CGAGGGGAAGCCGTA  80 66
 C1I96_05315 1190384 .. 1190404 -  -2.4  -3.94188   ATTCAGGTCAAATAA            CCTGTTCC GGGGT GGTTCAGG            AGGCATCAAAAGCTT  52 317
 C1I96_05310 NONE
 C1I96_05305 1188440 .. 1188476 -    -3  -4.05446   GGCTTGAAGGAGAAA   GGCCGT-TACTACCA TGTGGCGC TGGCTGCAGACGGCC    TGCCCGTGTATTATC  58 432
 C1I96_05290 1184030 .. 1184063 -  -8.7    -4.323   GGCAAATAGGGAAAA     CGGCGCGG-ACGGCGT GAA ACGCCGGGCCGGGCAG     ATGGGAAATACAAGG  80 54
 C1I96_05280 1181896 .. 1181914 -  -3.8  -4.58685   AAATGTGCGGAAAAA             CGGAGAAT TCA ATCATCCG             TTTTTTGGGAGAGGA  68 15
 C1I96_05275 1180824 .. 1180869 - -16.9  -3.59262   GTCTACAGCCGGAAA CAG-GCGCCGCCCTGCCAGG TAAAAAC CCTGGCAGGGCGGCGTTCTT CCTTTTCGGAATATC 100 187
 C1I96_05250 NONE
 C1I96_05245 1171212 .. 1171230 -  -5.2  -3.14211   AGCCCGCGCCAGCAA             CATGGCCT TGA AAGCCCTG             ACGGCATTTTCCTTT  52 82
 C1I96_05240 NONE
 C1I96_05235 NONE
 C1I96_05230 NONE
 C1I96_05225 1166633 .. 1166647 -  -7.1  -3.59867   GAAAAAATGAAGGAA               GGCAG GCAGG CTGCC               AGGGACGCCTATGAA  60 472
        recN 1161487 .. 1161505 -  -4.4  -4.25104   TCGTGCTGATGAAAA             GCAACCCC GCA GGCGTGGC             GGAAGCTGTCCAGCT  65 294
        mscL 1155185 .. 1155212 - -17.8  -5.32699   GTAAAGAGGAAAAAA        CATGCCGGTCCC GCAT GGAACCGGCATG         AACCGTTCAAAAGAA 100 42
 C1I96_05155 1153894 .. 1153904 -  -8.2  -3.14051   TGATCTGGATGAATA                 CGGG CGG CCCG                 CAAGCGGTGTTCCTG  60 115
 C1I96_05145 1150973 .. 1150993 -    -9  -2.59564   TGGCTAGCCCATAAT           GCGGCCTCC GGAA GGAGGC-GC            CGCAGGACCCCGTCT  63 48
 C1I96_05140 1149713 .. 1149749 - -15.8  -4.12902   GAAGGAGGCTGAAAA   CAGGCAGGCCGCCTCCG TTTC CGGTG-CGGCCTGCCGG    GTAGTGATGAATGAA 100 53
 C1I96_05130 1148280 .. 1148292 -  -4.8  -3.53012   CCTCCGGTGCTCAAA                CGGA ATTTA TCCG                ATGACGAGGAATTTT  55 19
 C1I96_05125 NONE
 C1I96_05120 NONE
 C1I96_05110 NONE
 C1I96_05105 NONE
 C1I96_05100 NONE
 C1I96_05095 1138538 .. 1138554 -  -4.4  -3.21593   CATGCCGGGACAACA              TGTCCC GGCAT GGAACA              TTACCTTACTTAAAA  48 35
 C1I96_05090 NONE
 C1I96_05085 NONE
 C1I96_05080 1134770 .. 1134802 - -17.9  -4.35461   GCAAGATGATGAAAA      CGGGGTTCCATTC GGAAAAA GAATGGAACCCCG      TGCTGAAGCGGTAAA 100 82
 C1I96_05075 1132772 .. 1132786 -  -4.2  -3.41936   CAGGAAGCTGAAAGA               GCAAAG GAT CATTGC               CGCGATATATGGCCA  50 69
 C1I96_05070 NONE
 C1I96_05065 1131676 .. 1131688 -  -3.3  -4.57073   CATCCGCTGGAAAAA                GGCCT TCC AGTCC                GTCTGCCTGGAGGTG  67 232
 C1I96_05050 1127190 .. 1127203 -  -2.3  -3.95852   ATTTTATCAATGAAA               CGGAT TTGG AACCG                ATTCGAGATAAGACT  54 382
 C1I96_05020 NONE
 C1I96_05015 NONE
 C1I96_05010 1116763 .. 1116795 -  -9.7  -2.57274   CTGGAGAAGGAATAT      CCCGGAATCCGGAAC TGG GGCGCGGAGTCCGGG      GAATGTACCGTCCGG  62 408
 C1I96_04990 1110813 .. 1110835 -  -3.4  -3.07994   CCGAAGCGGATGCAA           GCTTTTTCTC CGG GAGAAAGACC           GGAGTTCAATCAGTA  45 62
 C1I96_04985 1109365 .. 1109393 - -10.2  -4.93365   CCGGAGAATGAAAAA       GCCCCGCACCGCC TAGC GGCGGC-CGGGGG        TTGGCGTTGCTTGAT 100 60
 C1I96_04980 1107676 .. 1107696 -    -9  -2.74144   TTTTGATTCCGAAAG            CTCCGGAA CCCGT TCCCGGAG            GAGAAGACGCACTGG  60 91
        argH NONE
 C1I96_04965 1103509 .. 1103529 -  -5.3  -3.24423   CCCAATAAGAGTTAA            CAGGCCGTA TTG TGCCGCCTG            ATTCCCGGAGATGAG  52 193
 C1I96_04910 1092162 .. 1092191 - -15.7  -3.23855   TGCCGGAAAAACAAT       GAAGGGCGTCCCC TGAG AGGGCCGCCCTTC        TGATATAAAGATTCC 100 97
 C1I96_04900 NONE
 C1I96_04895 1087222 .. 1087243 -  -4.3  -4.36914   GTCTGCCGGAGAAAA           CGCCTGTCC CTGC GGACATGCT            TTTTGCTTCCGGCAG  68 516
 C1I96_04860 NONE
 C1I96_04855 1076499 .. 1076527 - -14.6  -5.55769   TGGCAGAACAAAAAA        CCACTGTACGGG AAATA CCCGTACAGGGG        TTTGATGAAAAGGGA 100 46
 C1I96_04840 NONE
 C1I96_04835 1069791 .. 1069827 - -10.7  -3.04144   GCCGGAGTGGGAACA    GGACACCCACCCCATGA GCA CCACGGGGAAGGCGGCC    AGAACAAGGAGAGGC  74 75
 C1I96_04830 1068873 .. 1068916 - -16.9  -5.63517   CCGGGAAACAAAAAA TGCCGGATAAGGTGATTGG TTTTAC CCAGTCATCTTATCCGGCA TTTTTATTTGCCCTC 100 225
 C1I96_04825 1067311 .. 1067321 -    -4  -4.82901   GTTTTCCCAGAAAAA                 CTTT GTT AAAG                 AAATATCTTTTGTTT  71 151
 C1I96_04820 1066113 .. 1066123 -  -3.2  -2.97109   CGAAGTCAATGAAAC                 GTCA AAC CGAC                 CATGGAATAATAAGT  45 96
 C1I96_04815 1065380 .. 1065405 - -13.3  -3.35197   GTTCATACAGAGGAA         CAGGCGTCGTG GAGA CATGACGCCTG          TTTTTTTATTGGCTG  91 271
        ribD NONE
 C1I96_04790 1057381 .. 1057396 -    -9  -2.52464   GTTTTTCCTAACGGA              GGTTCC GGCA GGAACC               GCTCAGGCCGGATCA  63 38
 C1I96_04785 1056756 .. 1056778 - -14.2  -5.70829   AAGATGAGAAAAAAA           CCCTGCAAGA ACG TCCTGCAGGG           TTGAAGAAGAAAACC 100 52
        hrpA 1052998 .. 1053015 -    -4  -4.85599   TCCATTTCAGAAAAA             GGCGCC GGATAA GCCGCC              TGTGCAAACAGCCTC  74 51
 C1I96_04760 1049394 .. 1049404 -  -2.4  -5.07652   TCTCTCAAAAGAAAA                 GCTG TTT CCGC                 TACTCCGCCAAAGGA  73 25
 C1I96_04755 1047060 .. 1047082 -  -7.6  -3.06501   TATACTCTTACGGAA           CTGGGGCGCA GTC TGCGTCCCAT           CCTGGCCTCCATGGC  57 161
 C1I96_04745 1046182 .. 1046209 - -17.7  -2.62184   TTCCTCCCCATAGGA        GCGCGGCCCGC TTTCCT GCGGACCGCGC         CGGTGGAAAAACCGG 100 69
 C1I96_04735 NONE
        lysS NONE
 C1I96_04725 1039492 .. 1039505 -  -4.5  -4.07568   CCGGTCTGCGGAAAA               GCCCT GTTT AAGGC                GCAATAAGAACAGCG  62 99
        plsY NONE
 C1I96_04715 NONE
 C1I96_04710 1037126 .. 1037153 - -18.5  -5.23316   CACTATATGAAAAAA        GGGCTGTCCGC AAACAA GCGGACAGCCC         TTTTGAAATCTTAAC 100 50
 C1I96_04705 NONE
 C1I96_04700 NONE
 C1I96_04695 1033703 .. 1033738 -  -2.6  -3.16068   TTCCCAATGTAAAAC   CCCCTGTTC-C-CGGT AAATCA ACCGCAAGGACAGGGG    CGTTTTACCTGCGCG  45 133
 C1I96_04690 1032199 .. 1032215 - -10.9  -5.96894   ACGGAAAGAAAAAAA              GCGGATT AAC AATCCGC              TGTTCCTTTTATCCA 100 105
 C1I96_04685 1031211 .. 1031232 - -14.5  -5.79595   GCGGAAAATAAAAAA           GAGGCAGCT TTTC AGCTGCCTC            CCTAATAACGAAAGT 100 45
 C1I96_04660 1026005 .. 1026038 -  -9.7  -5.53079   AAAACAGACAAAAAA     GAAGCCCTGTAATCC ATTA AAATTACAGGGCTTA      GAAAATTAGTGGCTC 100 35
 C1I96_04655 1025155 .. 1025165 -    -4  -3.29829   GATATGTTTTCACAA                 CTTT TCC AAAG                 CCTGTCTTTCGCCAT  50 9
 C1I96_04650 NONE
 C1I96_04645 NONE
 C1I96_04640 1023090 .. 1023100 -  -2.4  -3.81503   TTAAATAAGAAAAAC                 CGGG CTC CCTG                 CAACATTCAACGGCA  52 59
 C1I96_04630 1021997 .. 1022008 -  -7.2  -4.13945   ACCGTTACCGGAAAA                CCCC CGCC GGGG                 CTTCCATTCAAAAAG  71 266
 C1I96_04610 1018527 .. 1018552 -  -8.3   -4.4261   GCTTGAAGAGGAAAA         TTCCCGCCCCT GTTC AGGAACAGGAA          GAGGAATCTCCCGTC  80 13
 C1I96_04585 1011715 .. 1011727 -  -6.9  -3.65426   GGAGAAATGTTCAAA                CCGGA ATT CCCGG                GAAACTGCGGCGCCA  63 124
 C1I96_04580 1011130 .. 1011151 -  -2.1  -4.21936   TTTACAAGCCGAAAA           CCCACCGGC TGAA GCAAGTGGT            TCAGAGCGACATGCG  60 311
 C1I96_04570 1008267 .. 1008277 -  -2.4  -4.20806   CACCCGAAAATGAAA                 GGCC GCA GGCA                 CCTCCGCACTAATTT  57 34
 C1I96_04565 1007637 .. 1007652 -  -4.6  -3.38378   TCACATGTTAAAAAC              CGGGAT TAAT AACCCG               TTCCGTATAGCGGGC  52 2
 C1I96_04560 1007066 .. 1007076 -  -4.6  -3.13743   AAACCCCATATGCAA                 CAGC CAT GCCG                 CCGGAAGGAAAGCGG  50 73
 C1I96_04555 1006844 .. 1006864 -  -9.7  -5.72254   GGAAACAATAAAAAA            CGCGCTCTC TGA AAGAACGCG            CCATAAAATGAAAAG 100 41
 C1I96_04550 NONE
 C1I96_04545 1004353 .. 1004389 - -11.6  -3.29263   ATACCGTCCCGACAA    CCCCGTCCGGTCTGAA ATCGA TTCAAACCGGCCGGAA    AACAGGCAATTAATA  82 54
 C1I96_04540 1003810 .. 1003822 -  -2.6  -4.90906   GGAGAATATGAAAAA                CGGC TCCCC GCCA                TCCGTGAGGCAAGGC  72 209
        rfaD NONE
 C1I96_04500 NONE
 C1I96_04495 NONE
 C1I96_04490  991143 ..  991163 -  -2.4  -4.42788   CGCAATGTCAGAAAA            CGGCTGCC CAAAC GCCAGTCG            CCGGACATCCCCCAT  63 424
 C1I96_04480  990178 ..  990206 - -13.9  -4.96848   GTTTTTATAGAAAAA        GCCGCACCTGG ACAATCA CCAAGTGCGGC        TTGAAAAGTCGTACT 100 57
 C1I96_04475 NONE
        truB NONE
        ribF NONE
 C1I96_04460 NONE
        secG  986512 ..  986540 - -18.2  -3.85817   ACCCCGGTGCACAAA       CACCCCGGC-GCC TTCC GGCAGCCGGGGTG        TTAAAAAGAATGCTC 100 43
 C1I96_04450  985676 ..  985713 - -12.7  -3.07344   TTATGCCTGAATATA   CCGCGGGACCTCACGGCC ATA AGCCG-GAAGCCCCGCAA   AATGAAGCGGCCGCG  83 68
 C1I96_04445  984262 ..  984272 -  -2.4  -4.36914   CCGGCCGGGAGAAAA                 GGCG GCA CGCA                 AAACTCCGTTTTCGA  63 283
 C1I96_04385  973445 ..  973457 -  -4.1  -3.67296   GATTAGCTATTGAAA                CGCAA ACA TTGCA                TCATCCCAATCTTGG  55 440
 C1I96_04375 NONE
 C1I96_04370  966189 ..  966207 -    -9   -4.4846   TAATGCAATAATAAA             TAGAATTC CTT GAATTCTA             CTCTCTTCTACAGAT  83 186
 C1I96_04365  965335 ..  965351 -  -3.1  -2.99762   ATTAAAAATTCAAAT              TAAAAAA TTG TTTTTCA              TAAAAATATATAACT  43 145
 C1I96_04360  963897 ..  963907 -    -4  -2.75803   AGAACACTTTAACTA                 TTGA CAT TCAA                 TAAATTGATCCGAAA  45 182
 C1I96_04355  962581 ..  962629 -  -8.1  -3.33151   TTCTGGAAATGAACA TCTGCTGCCACCTGGGCAAAAG CGGCTC CATCTG-CCTGGCGGCCGCAGA ACACGGCTACTCCCA  62 171
 C1I96_04330  957352 ..  957362 -  -8.2  -4.09685   CGTGATTGTGGAAAA                 CGGC ACA GCCG                 TCACCCATCTTTTCT  73 511
 C1I96_04320  955957 ..  955980 - -13.8  -4.45544   TTGGACCAACGAAAA          CGGCTCCGTC ATCC GGCGGAGCCG           TTTTTTTGCGCTATT 100 259
        typA  952702 ..  952723 -  -6.5  -4.56597   TTTTTTCTGGAAAAA           CCCGCC-AAC AGG GTAAGGCGGG           AAACGCTTTCACCGA  77 317
 C1I96_04285  946677 ..  946709 -  -5.6  -4.25104   CTTCCTGCATTAAAA     GGC-CGGGAAAAAGC CCCG GTTTTCTCCCGCACC      CATGGGTCAAGAAAC  66 32
 C1I96_04265  942704 ..  942716 -  -3.3  -2.57132   GGCCTCCCGCAGAAG                CCGCA TCA TCCGG                AACAAATGGAACGCT  40 266
 C1I96_04255  939982 ..  940006 -  -7.1  -3.02946   TCGGGAAGGAGAAAC          GGTTTCCATTC CGG GCATGGGAACC          TCTGCCCGGACAAAG  59 53
 C1I96_04245  937179 ..  937191 -  -4.8   -3.6849   ATTGAACTGCAACAA                CAGG CGTCT CCTG                AAGGACAACAGCGTT  57 39
 C1I96_04240  934716 ..  934731 -  -6.8  -3.59293   GGAAATGGAAACCAA              CGGCAC CATC ATGCCG               GATACGGAACTGCTG  60 468
 C1I96_04195  925771 ..  925806 - -12.7  -2.94232   CTGCCCGTAAACAAG   CCGGGCCCGC-TTCCTC CGGA GAGGAACGCAGGCC-GG    AAAGGTCTTTCGTCA  75 54
 C1I96_04160 NONE
        trxA  918571 ..  918603 - -20.6  -5.40072   TGCCCGGTAAAAAAA      CCGGCCTGCCGCAG TAAAT CCGCAGCAGGCCGG      CTTGAATGAATAAAC 100 53
 C1I96_04150  917082 ..  917098 -  -6.5  -3.33792   ACCACGGAGAGAATA              TTCCGGA TTT TCCGGCA              GAGAAGGAGGGGATA  59 52
 C1I96_04145  915408 ..  915428 - -11.1  -3.85704   TGATTAACTACGAAA            CCGTTCCGG AAC CCGCAACGG            CCACGCTGAGCCTCC  80 246
 C1I96_04085  900412 ..  900428 -    -8  -2.97667   TGATTTACGAAACTA              TTCCGC CGTTC GCGGAA              CCTTGTCGCAAGCAA  60 76
        rpsB NONE
 C1I96_04075  898587 ..  898614 - -16.4  -4.97158   CCATATCAAACAAAA        GAACCGTTCCCC GCAA AGGGAACGGTTC         CAGAGATACTCTGAC 100 48
 C1I96_04070  898120 ..  898136 -  -2.9  -3.65046   CCGCCACCCTAACAA              GCCTTCC GAT GCAAGAC              AAGACCCCAGCCGCG  51 56
 C1I96_04065  897272 ..  897284 -  -5.5    -3.737   TAACTCCGCAGGAAA                CGGAA CTT TCCCG                TATTCGTCCAAACTG  59 59
 C1I96_04060  896705 ..  896725 -  -8.3  -4.08394   ATAGGCCGGGGAAAA            GACGTCCAT GAG ATAGACGCC            GCTCTGATGGAGGAA  73 79
 C1I96_03940 NONE
 C1I96_03935  866743 ..  866754 -  -4.4   -4.7497   CTTATTGACGAAAAA                TTCC TCTT GGAA                 GATATCAAAAAATTA  74 304
 C1I96_03915  861431 ..  861456 -  -6.7  -4.08064   AATCTCCCGTGAAAA         CTGCCAGGGCC AGCT GGCCCTCGCCA          CCCGGCAATACGCCA  68 150
 C1I96_03880  853334 ..  853369 -  -8.9  -2.53346   GCAGAAATGGAAGAT    GAAGACGACGCAGGC CCTCGC GCCGGAGACGTCTTC     CAATAACGGTTATCC  58 477
 C1I96_03860  848603 ..  848631 -  -5.3  -4.47707   CTCCATCAAAAACAA       CGC-CGGACCGGG GAGAA CCCG-TCCGAGCA       AAAGTTCCCCTCCTT  69 61
 C1I96_03840  844290 ..  844320 -  -8.4  -5.38054   CCCTATAAATAAAAA       CTGCAATATACTCA TCA CGAATATATTGCGG       TGGAAAATTGATGGC 100 37
 C1I96_03835 NONE
 C1I96_03830 NONE
 C1I96_03825  841611 ..  841622 -    -3  -4.77157   GCAAGTTATGAAAAA                TATG GTCT CATA                 CAATGTATATTAAAG  68 485
 C1I96_03820  838491 ..  838519 - -11.1  -5.38054   GGTCACAAATAAAAA        GGTCGTTTCCCTT GAG AAAGGAAACGACT        TCAGAAGAGCATCTC 100 226
 C1I96_03805  833753 ..  833781 - -11.1  -5.38054   GGTCACAAATAAAAA        GGTCGTTTCCCTT GAG AAAGGAAACGACT        TCAGAAGAGCATCTC 100 227
 C1I96_03795 NONE
 C1I96_03790  829897 ..  829919 -    -9  -3.55061   TCATACAGAACAACA           CGGGCATCCG GGT CGGAATCCCG           CCTCTGTCCTGTACA  68 305
 C1I96_03780  829107 ..  829119 -  -4.8   -3.4582   CCACTTCATCAAATA                CGGT GCGGA ACCG                GATAAAATCCTGCAC  52 324
 C1I96_03770 NONE
 C1I96_03765  826012 ..  826041 -  -7.9  -3.41738   CATGGTAATACAACA       CTATACCACGGCA GGAC TGCCGTAATAAAG        CAAGAATAACGAAAG  64 147
 C1I96_03760  825101 ..  825137 - -16.7  -3.53012   CTCCGGCTGTTTAAA    CAAAACCCCGCGTGC CTGAGGC GCATGCGGGGTTTTG    TTCATCATCCGGCAG 100 108
 C1I96_03750 NONE
 C1I96_03745  819871 ..  819881 -  -6.8  -4.77036   CGCCATCACCAAAAA                 CCTG AAT CAGG                 CTCTGAAAGATGAAG  79 436
 C1I96_03735  818642 ..  818678 -  -2.9  -4.09649   TACAGCAGAAAAAGA    GGGCGCGTCAACCCG GAGAACG CAGATTGACGCACAA    AAGGAGTTAATGGCC  56 32
 C1I96_03730 NONE
 C1I96_03725  817113 ..  817124 -  -2.2  -2.82623   CTTTCTCCATAAGCA                CAGA TTTT CCTG                 AACCGGGCGGAATCA  40 38
        rsmI  816189 ..  816213 -  -7.2  -2.59564   TTCGGAGCCGATAAC          CCGGATGAAA AAATA TTTCATCCTG          CTGAGCGATCCGGCC  53 218
 C1I96_03710  814875 ..  814897 -  -7.6  -3.08679   GGCGGGCATCGAATA           CGCCCATTCC AAC GGCACGGACG           CCAGCCGGCAGAAAG  57 186
 C1I96_03695  812092 ..  812105 -  -8.1  -3.67305   GACAGAAACAACGAA               CAGGC GTCC GCCTG                CGGCATTTCCGGGGC  68 42
 C1I96_03675  807279 ..  807298 -   -10  -3.78329   GTGGAGGAAGGCAAA            GCCGTACT GCGC AGCACGGC             GCGGGCGGGGGATCT  75 491
 C1I96_03660  804336 ..  804368 - -15.6  -2.73875   CCCCTCCGAATATGA     GCAGGGAGGGACCCC AGCC AGGGCCCCTCCC-GC      AAATTTGATTAATCC  95 43
 C1I96_03655  801422 ..  801440 -  -8.8  -3.38951   GCATGAAGAGAGGAA             GCCGGC CACGCAT GCCGGC             GTCAGAAAGCTGATC  66 257
        hflX  799600 ..  799643 -  -4.5  -4.03167   GAAGATGAAGAAGAA GCCCGGTCCATGC-TCCGGA AGCTG TCCGGACGCACGCACCATGT CTGCACGGCGGTTGC  61 391
 C1I96_03630  787472 ..  787482 -  -2.4  -4.15044   CCGTTCCGGAATAAA                 TCCG GAA CGGC                 TCTGAAGGGCCAGGA  57 93
 C1I96_03620  785917 ..  785950 -  -4.5   -2.8805   AGCATTCCGGACACA     CGGTATCAGGGGCG CTCCTGC CGCCCCTG-TTCTG     CGGGCCTTCCTTTAT  47 66
 C1I96_03610  784614 ..  784641 -   -20  -3.60098   ATTTTTTACTGGAAA        GCCGCTTCATCC ACCC GGATGAAGCGGC         TTTCGTCCAAGGTCT 100 54
 C1I96_03595 NONE
        metF  780603 ..  780627 -  -7.2  -2.74701   AGATCTGGAAGATTA         CCCCTGCCTCA GTTT TGAG-CAGGGA          ACCTATAATTCCTTT  54 340
 C1I96_03540  768920 ..  768931 -  -3.6  -4.74453   GAAGACAGGGAAAAA                GGCG TTTC CACC                 CTGTTGAACTGGCAG  72 285
 C1I96_03530  767044 ..  767078 - -10.7  -3.55203   AAAAGGGGGCGGAAA     CAACCCCATACCTGC ATGGA ACAGGCAAGGGGCTG     CCGCCCATGCTCCAG  74 401
 C1I96_03520 NONE
 C1I96_03515  765440 ..  765474 - -10.1   -3.7557   TGTAAAAAGGAAACA    GGCG-GGCTGAA-AGGA AAT TCCGGTTCAGCCGCGCC    ATGCATGATGCGTCC  79 15
 C1I96_03510  764943 ..  764981 -  -3.1  -3.50722   CGCAAGCAGTAAACA   CCACCCCCCCTTTCATG GCAAG CGTAAAATGGAAGATGG   ACAAAAAAAGATCAG  49 37
 C1I96_03505  764792 ..  764817 -  -9.8  -5.82036   ACAAGAAAGAAAAAA         CCCTGTAAAC TATTGG GTCTACAGGG          TTTCAAAAAAGGAAT 100 40
 C1I96_03460  754304 ..  754314 -  -6.8  -3.40163   GAGTATGAAGAGGAA                 CGCA AGA TGCG                 GTTACCTCTGTAGAG  59 81
 C1I96_03455  753998 ..  754016 -  -6.6  -2.74836   GATCATGATAAAGAT             CCGCACCT TGG AGGCGCTG             CTTGCGCAGGCATGG  54 50
 C1I96_03450  753318 ..  753346 - -12.5   -4.3467   ATGGGCATAGCAAAA        CGCTAGGCTAAAT AAA AATCAGCCTAGCG        TCAAAATCTTTATAA  95 62
 C1I96_03445  753022 ..  753036 -  -2.8  -3.80174   ATATTCGGAGAAGAA               GGCA GAGATAT TGCC               CGGCACTTTGTCATC  54 39
 C1I96_03440 NONE
 C1I96_03435 NONE
 C1I96_03430  750160 ..  750178 -  -8.2  -2.55074   TGGAAGCGGAATTCA             TCTGCATC AAC AATGCAGA             CCCGCACACTCTCCA  55 398
 C1I96_03405  747018 ..  747043 - -16.2  -5.79595   GCGGAAAATAAAAAA         GCGCCGCCAT GCAGCG ATGGCGGCGC          CGGGATGGAAAACAT 100 44
 C1I96_03400  746288 ..  746311 -    -6  -3.72893   TACTGGTGTATTAAA          GCATGCAAAT TCAG ACTTGCAAGC           ATCATTTTAGACCCT  61 50
 C1I96_03395 NONE
 C1I96_03390 NONE
 C1I96_03385  744334 ..  744361 - -17.1  -5.29445   CGTCAATAACAAAAA        GCTTCCGCTCC TCTTGG GGAGCGGAAGC         TGAGAGTCAATGAAA 100 61
 C1I96_03375  743591 ..  743601 -  -6.8  -3.01712   TCCCGTCTGTCAAGA                 TGCC AGA GGCA                 TATTTAACATGGCGC  55 293
 C1I96_03370 NONE
 C1I96_03365  738844 ..  738894 - -17.8  -5.42164   CAGAAACAAGAAAAA CTCAACACAAGGGCCGTCTCCCC CCTTAC GGGGAGACGGCCCTTAT-TAAAG AAATATCGGCCGGCG 100 63
 C1I96_03345 NONE
 C1I96_03340  730928 ..  730948 -  -6.8  -4.19238   TCCCGAACCGGAAAA            CGGCAGGA GTCTT TCCTTCCG            GTCACATTTCACTAA  71 27
 C1I96_03305  722055 ..  722080 - -15.5  -5.00339   ATCAACAATGAAAAA         CCGCCCCTTTC CGAA AAAAGGGGCGG          TTTTAAAGACCTTGG 100 61
        proB NONE
 C1I96_03290  717078 ..  717108 - -15.4  -2.59971   GGAGTATATATCAAC       GGAAGCATCGCGGC CAT GCCGCGGTGCTTTC       TTGTTTACGGCGGGC  95 48
 C1I96_03240  703057 ..  703094 -  -2.5  -4.12942   GGAAATCCGGGAAAA   CATGCTGGGAGGCAGAT AGAA AACAGCCTTTCCGCATG    CAGCGCCTTCCGGGA  55 65
 C1I96_03220  697949 ..  697973 -  -3.5  -2.54325   GTGTGGCAAATATAC          CGCAAGGAATC AAC GATTATTCGCG          CTCACGCTTATTCCT  42 33
 C1I96_03215  695242 ..  695258 -  -7.2  -3.27022   GTCATCTGACAGGAA              CGCCGC TCCTT GCGGCA              ACAGTCTCATCAGCG  62 220
 C1I96_03210  692953 ..  692977 - -15.8   -5.5112   TCCATCAACAAAAAA          GCTTCCGGGA ATCCA TCCCGGAAGC          CTGCAGGAAGAACTG 100 49
 C1I96_03205 NONE
 C1I96_03200  691421 ..  691466 -  -5.4  -3.57615   TGAACATGCCGGAAA TTTTCCGGACCGGCAGGGGACG GGCG CGCCGCC--CCGGAGCGGAAAA GCTCCCTCCGGGGTC  56 53
 C1I96_03195 NONE
 C1I96_03190 NONE
        atpA NONE
        atpG NONE
        atpD NONE
        atpC NONE
 C1I96_03165  685441 ..  685455 -  -8.6    -3.786   CCACAAAAGCTGAAA               GAAACG AGC CGTTTC               CGGTATTCTCCAGCA  71 75
 C1I96_03155  683518 ..  683541 -  -7.4  -3.30007   AAGACCGGCCCATAA          CGG-ACGCCCG GCG CAGGCATGCCG          ATCCCGTGCGGGAGG  62 98
 C1I96_03150 NONE
 C1I96_03145 NONE
 C1I96_03140 NONE
 C1I96_03135 NONE
 C1I96_03130  680169 ..  680197 -  -4.4  -3.23481   AAATGAAAGTCAAGA        GCCGATCCGGAT GAACA AACCGGAGGGGC        TAAAAGGCTGCAAAC  48 47
 C1I96_03125  678121 ..  678141 -  -2.4  -4.58283   GAACCTTCTGAAAAA            CAGCGCGC CATCC GCGACCTG            GAATTTCTGCTTCTT  65 193
 C1I96_03095  669059 ..  669084 -  -2.5  -4.02139   TGAAACCCAAAAAGA         CGGAGAGAC-GG TCC CCTATCCCTCCT         TTTCCGTCCTGATAT  55 15
 C1I96_03060  663389 ..  663403 -  -4.2  -3.90112   CCGTGCTGAAGGAAA               CCGG AAGAACG CCGG               ACGACGTCATCCTGG  59 414
 C1I96_03045  659877 ..  659893 -    -8   -3.1352   GTGCAAGGCAACATA              GCGGAT TGCAT ATCCGC              CGCCTGCTTTTTTGC  62 224
 C1I96_03040  658405 ..  658417 -  -6.3  -4.07568   TGTCTCTTCTCAAAA                TGTTG AAA CAACA                GCAAAAACATCAATA  68 35
 C1I96_03035  657375 ..  657386 -  -5.8  -3.06796   CCCTATGGCACGGAA                TGCG CCGG CGCA                 GCAGAAGGAGGGCAA  53 88
 C1I96_03025  656052 ..  656066 -  -2.8  -4.07246   TTACCGGAAATGAAA               GGAACA TCA TATCCC               TACTGGCGAGCCTTG  56 25
 C1I96_03020 NONE
 C1I96_03015  653962 ..  653972 -  -2.4  -2.84051   GCACTGTTATGAAAC                 TGGG TAT CCCC                 TCCACGCTCCGCATG  39 219
 C1I96_02995  649554 ..  649571 -    -7  -3.16261   AATCAGAAAACTATA             CAAGCG TAAAGT CGCTTG              TGGGAATCGAGGGCA  54 464
 C1I96_02985  645775 ..  645810 -  -8.2  -4.24948   CGACCAGATTGAAAA    GAGCGGCGTCAAG-GTG GAG CTCGCCTGACGCCGGCC    TGCTTTACAGGGGGC  77 214
 C1I96_02900  626688 ..  626704 -  -7.2  -4.64676   TTATCCTGAATAAAA              CGGCAG TCCCC CCGCCG              GGCAGAAAATACAGA  80 137
 C1I96_02895 NONE
 C1I96_02890  623539 ..  623550 -  -3.6   -2.7263   ATGATTCCCTCAAAT                CCGC AAAC GCAG                 TCAAAAACTTTGTAG  42 72
        queG  610668 ..  610694 -  -5.2  -3.00918   ATGGATACCATAAAT         TGAGGTTTTGAC AAG ACCAAAACATCA         TTTTTTCTATTTTTA  51 38
 C1I96_02835 NONE
 C1I96_02830 NONE
 C1I96_02825  608926 ..  608951 - -12.5  -4.14392   CCTGAATGCCCAAAA         CCCCGGCCGCC GAAA AGCAACCGGGG          TTTTGAAGCAAATCC  95 56
 C1I96_02820  608007 ..  608021 -  -5.8  -3.76373   TTGCTAACATGGAAA               GAAAAA TGC TTTTTC               CCCCCTTGTTAAGAA  61 88
 C1I96_02815  607017 ..  607040 -   -16  -5.65513   CAGCAATTAAAAAAA          GCGCGGCGGA TTTC TCCGCCGCAC           CTGAAAATATAATTC 100 59
 C1I96_02810 NONE
 C1I96_02805  604695 ..  604711 -    -5  -5.02074   TTACGTCGCAAAAAA              CTGCGG GACTG CCGCCG              GAGTCATTGTTATCC  84 369
 C1I96_02790 NONE
 C1I96_02740  589881 ..  589895 -  -5.6  -4.87665   TTGGAGCCAGAAAAA               CAGCGC GAT GCGCCA               TCACGGAAACGGAAG  78 56
 C1I96_02735  587585 ..  587612 - -18.5  -5.24129   TCCTGTTATAAAAAA        GCCGCTTCCCC AATTCA GGGGAAGCGGC         CTTGAAACCACAGGA 100 49
 C1I96_02710 NONE
        gmhA NONE
 C1I96_02700  581738 ..  581749 -  -5.8  -5.61881   GTGCAAAAATAAAAA                GCCT GTAC AGGC                 CAGGTTCACGAGACT 100 186
 C1I96_02695  578644 ..  578683 - -10.7  -4.62872   ACCAAGGGCTAAAAA  TCCAGGGCGGCTATTCC ACGGAA GAAACAGCCGCCCCAGG   GCCAGAGGACACCAC 100 69
 C1I96_02685 NONE
 C1I96_02680 NONE
 C1I96_02675  574913 ..  574926 -  -2.3  -4.07568   CGCTGGGCGCTAAAA               CGGGA GTCA TCTCG                GACATTCCGGAAAAC  56 232
 C1I96_02660 NONE
 C1I96_02655  571695 ..  571711 -  -5.8  -4.93877   GGGCATCAAATAAAA              CGCAGG CGGCC CCTACG              CCCGGCAGCCTCAGA  81 36
 C1I96_02650  571328 ..  571339 -  -4.4  -2.52543   ACCGTCCGCAACCGA                CTCA CCGG TGAG                 CCTCCCGCACGGCAT  44 15
 C1I96_02640  569697 ..  569708 -  -4.4  -2.95717   ACCAGACAGAACAAC                TTGG CAGG CCAA                 TTAAGCAATAGCAGT  47 26
        bioD  568872 ..  568902 -  -2.6  -3.64283   CAAATCCGGCAATAA      CGAACGGG-CG TCTTCGCTAT CGTCCCGTTCA       TTCGCCAGACAGACT  51 48
 C1I96_02630  566131 ..  566142 -  -5.8  -3.75898   AAGAAATCAGGGAAA                CGGA CTTC TCCG                 GCCTTTCTTCCGCGG  61 445
 C1I96_02615  563304 ..  563327 - -18.2  -4.75372   ATCAGGCATGAAAAA          GGGCGCATCC TTTC GGATGCGCCC           TGTACAAATCATACT 100 51
 C1I96_02610  562774 ..  562790 -  -3.7  -4.03413   ACTCCTGCAGACAAA              TAAACCT CCC AGGTTTT              CCCCACCAGGGCATT  58 173
 C1I96_02600 NONE
        nadD  559038 ..  559074 -   -11  -2.52946   TTCCTCTACAAAATG   GTGC-GCCTCATGA-CGG GAG CCGCCCATGAAGCCGCAC   GGGGAAAAATAACGC  67 192
 C1I96_02585 NONE
 C1I96_02580 NONE
 C1I96_02575  550108 ..  550121 -  -2.3  -2.78813   TTTCATCTCAATAAG               TCGCA TCAC TGCGT                TAGACAGCTGGAGGC  40 119
 C1I96_02570  549161 ..  549177 -  -4.3   -4.3208   GGTTATAACGGAAAA              CAAGCCG GCG CGCCCTG              AGCCGGGCGGCAGCC  65 83
        rpsO  548203 ..  548236 - -10.1  -4.82901   CCCCTCCCATAAAAA     CAACGGCCGCTGCGG AAAA CCGCAACGGCCGAAT      CAAACGGGAATATGC 100 49
 C1I96_02555  545175 ..  545205 - -20.5  -4.30014   TCCAGCAATCGAAAA       GCCCCGTTCCCGG AATAA CCGGAAACGGGGC       TGAGAATTTAAAGGC 100 54
 C1I96_02550 NONE
 C1I96_02545 NONE
 C1I96_02540 NONE
 C1I96_02535  539172 ..  539183 -  -7.2  -3.63515   GCCTAGCGGGAAGAA                CGGC TTGA GCCG                 ATGGCTTTTACCAAC  67 1
 C1I96_02530  538222 ..  538236 - -11.4  -3.08327   ACCAAACCGGGAAGA               CAGGCC ATT GGCCTG               GAAGACATCGCAAGC  71 246
 C1I96_02520 NONE
 C1I96_02515 NONE
 C1I96_02510  532289 ..  532300 -  -3.6  -4.03043   AGAAAGGGAAAAATA                CGGA TTAA CCCG                 AATTTCCATCAAAAA  58 253
 C1I96_02505  530374 ..  530420 - -15.3  -3.80551   TAAACACTTATTAAA GCTCCGCAGCCGTC-AGGTCCA CGCA CAAACCTTGACAACTGCGGAGC TGCGCTTACACACAC 100 81
 C1I96_02500 NONE
 C1I96_02495  526091 ..  526126 - -13.4  -3.61398   GCCTTGCCTTAACAA    GGCTCCGGAGG-TCG TTGCTTG CGAACCTCCGGAACC    TGAACAACCGTGAAT  91 81
 C1I96_02485 NONE
 C1I96_02480  520842 ..  520852 -    -4  -4.84761   AGATTTTTACAAAAA                 TGTA ATA TACA                 TCCCTTGTTTCGTTC  74 45
 C1I96_02475 NONE
 C1I96_02470  518163 ..  518175 -  -6.9   -4.6902   GGATAAGCGGAAAAA                GGAGG AAG CCCCC                GGGAACAAGCCCGCG  79 102
 C1I96_02450 NONE
 C1I96_02445 NONE
 C1I96_02440 NONE
 C1I96_02435 NONE
 C1I96_02430  507817 ..  507833 -  -7.9  -4.57474   GGAACGCAGACAAAA              CCGGGAG CAG CCCCCGA              AGCTCCATCACTTAC  81 37
 C1I96_02405 NONE
 C1I96_02400  504041 ..  504089 -  -6.6  -4.07885   GACGCCTCCGCAAAA GCGCACGCTG-TAGCGGAAGACC GCAG GGCCTTCCGCAATCACCGGATGC CCTGCCGGGCAATGC  68 60
 C1I96_02385 NONE
 C1I96_02380 NONE
 C1I96_02375  499803 ..  499837 -  -7.2  -2.82142   GGGACATGGAATAAG    TCAGCGCAAAGGGGG TCATTT CCACCTTCG-GCTGA     ATTTCCTTCCTGTAC  57 492
 C1I96_02370 NONE
        rsfS  497270 ..  497295 - -16.2  -5.86976   CCAGAAAAGAAAAAA         CCGTGCCGCA ACCGGA TGCGGCACGG          TGTGAAGTCAGATTG 100 47
 C1I96_02360 NONE
 C1I96_02355 NONE
 C1I96_02350  493867 ..  493900 -  -7.3  -3.01791   ATCTTTTTCCGAATA     CGCGGCCCGGAAAAG CATT CTTTCCCCTGCCGGG      AAAATCATGTTCTCA  59 30
 C1I96_02345  493112 ..  493134 -  -4.1  -3.78775   CCGGGCAGCAGGAAA           CGGAGAAAA CTTAC CCTTCCCCG           TTCAACAGCGGCAGC  55 13
 C1I96_02335  490201 ..  490220 - -13.6  -6.00086   ACATCACAAAAAAAA            CCGCCTGT TTTC ACAGGCGG             TCTCAAGAAAACACG 100 48
 C1I96_02330  489389 ..  489399 -  -5.4  -3.55592   AGAACGCCAGAAATA                 CATG CTG CATG                 CGGAAATCAACCTGT  56 276
 C1I96_02310 NONE
 C1I96_02305  484497 ..  484507 -  -2.4  -3.33162   CATCTGATGGCAGAA                 CGGC CCC GCCC                 TTTCACAAACCCAAC  45 28
 C1I96_02300  482152 ..  482165 -  -2.3  -2.52896   TGACGGGGGAACTCA               TGGCG GAAA CGCAA                GGTTAAAACGTGGTC  39 28
 C1I96_02295  481404 ..  481415 -  -2.2  -3.36749   CAGTTTGAACATCAA                CGTC ATAA GACA                 TCATTCAGCGTACGT  45 16
 C1I96_02290  478444 ..  478456 -  -3.3  -3.25657   GAAGCAAAAAAACAG                GACAG AAG CAGTC                AAAGCGACAATATTC  46 153
 C1I96_02285  477237 ..  477251 -    -5  -3.40112   ACCAGACCGGAAATA               CTCATC GCG GATGAA               CCCACCACCGCCCTT  54 510
 C1I96_02230 NONE
 C1I96_02225  463953 ..  463981 - -17.6  -5.05601   CATGACATAGAAAAA        TCCGTTTCCGGA ACGCA TCCGGAAACGGA        TTTCATCAATGAACT 100 51
 C1I96_02215 NONE
 C1I96_02210 NONE
        fusA NONE
 C1I96_02200 NONE
 C1I96_02195  459274 ..  459285 -  -4.4  -2.98942   ATTTGCGGACATAGA                TAGG TTTT CCTA                 TAATCAATGTGAGGT  47 52
 C1I96_02190 NONE
 C1I96_02185 NONE
 C1I96_02180 NONE
 C1I96_02175 NONE
 C1I96_02170 NONE
 C1I96_02165 NONE
 C1I96_02160  455309 ..  455323 -  -2.8  -3.72576   CTCTTGGGCATTAAA               GGCATA TCT TATTCC               TCCTTGTGTTAAGTG  51 68
 C1I96_02155 NONE
 C1I96_02150 NONE
 C1I96_02145 NONE
 C1I96_02140  453899 ..  453925 - -18.1  -5.55769   GGGGACAATAAAAAA         CGCCATCCTCC TTTTC GGAGGATGGCG         TCCAAAATCCTGAGA 100 49
 C1I96_02110 NONE
 C1I96_02105 NONE
 C1I96_02100 NONE
 C1I96_02095 NONE
 C1I96_02090  441873 ..  441883 -  -8.2   -3.1552   GGTCATTGACGAATA                 CCCC ATG GGGG                 AATACACCAACGTGG  60 349
 C1I96_02065  439182 ..  439201 -  -2.7  -5.22039   GGGAAATGGAAAAAA            GAAGCGC CCCCTT GCGCCAC             TCCGGCCTGATTCCC  77 40
 C1I96_02055  437683 ..  437711 - -13.1  -3.93216   GTCAAACGAGAAGAA        CCCCTCCCCGCAA ACA TGGCGGGAAGAGG        CCCGGAAAAACGGAA  93 68
        trmB NONE
 C1I96_02045 NONE
        yajC  435499 ..  435533 - -17.9  -4.85782   GGTTTCAAAAATAAA     CATCCGCCCCTGCCG ACGGG CGACACGGGCGGATG     CAGGAAACGTACGGA 100 53
 C1I96_02035  434578 ..  434590 -  -2.7  -3.21595   AATCCCCATCATGAA                GAATA AAT TACTC                CGTACCTTTATCCTT  45 20
 C1I96_02030  433624 ..  433636 -  -5.5  -3.90922   ATGCCTGGGAAAGAA                GCAGA ATA CCTGC                GAATATAAGTTCTTC  62 61
 C1I96_02020 NONE
 C1I96_02015  432569 ..  432592 -  -6.6  -5.08731   CAAGAAACAACAAAA          GGCGATCCCC ATTA AAGGAACGCC           TTCAGGAAAATAATA  87 56
 C1I96_02005 NONE
 C1I96_02000  430136 ..  430152 -    -8  -3.14026   TACAGGCATACTTAA              TGCCTG ACAAG CAGGCA              GGGCGGCACCATTCA  62 94
 C1I96_01995  429626 ..  429640 -  -2.8  -2.79291   AAAGGTGATTAATGA               TGATCT CCC AGTTCA               TTGAGGGCGTCCCAC  42 4
 C1I96_01990  429308 ..  429339 - -12.4  -2.60075   TCCGCTTCAAGCAAG      TTCAGCCGC-TTTGC GAA GCAAAAGCGGCTGGA      AAGTCTATATGATAG  78 90
 C1I96_01985 NONE
 C1I96_01980 NONE
        ybeY  425952 ..  425967 -  -5.4  -4.09685   CCGGATCTTTGAAAA              GCGCGCT TTA AGCGC-C              GGAGCAGCGGTCATG  64 17
 C1I96_01970  425782 ..  425807 - -11.9  -5.40279   CAAAAGAAAAGAAAA         CCCCGCAAACC TTTC AGTTTACGGGG          TTTATAATGGCACGT 100 33
 C1I96_01965  424574 ..  424589 - -10.4  -4.18494   CATCTTCAGGGAAAA              TCCGCC AGTA GGCGGA               CACATCTTCTGGGTT  85 56
 C1I96_01940  419300 ..  419324 - -10.1  -2.81413   GAGGAATCAACAGGA          CTCTATCAAGC CTG GCTTGATAGAC          CTCATACAATCTAGA  63 227
 C1I96_01930  418717 ..  418733 -  -2.3  -2.57881   TAATCCGTTCATAAT              TCACTAA GAT TTAACGA              TGAAATAAATGATCG  39 12
 C1I96_01925 NONE
 C1I96_01920 NONE
 C1I96_01915 NONE
 C1I96_01910  415449 ..  415464 -  -3.2    -3.794   GTCGAATTCATCAAA              GGCCAT GCGG ACAGCC               TCAAGGATAGTCTCC  55 76
 C1I96_01905 NONE
 C1I96_01900 NONE
 C1I96_01895  414444 ..  414461 -  -2.7  -3.63569   GGAACTCTGGAAGAA             GC-AGTTG TAG CAACCAGC             AACCCAATTGGTTGT  51 109
 C1I96_01890 NONE
 C1I96_01885  413303 ..  413326 -  -7.4  -2.73994   ATTTCGGCAAGATCA          CCGAGGACTC TGGC AAGTCCTCGT           CCCACAAGCAAAGGT  56 387
 C1I96_01875 NONE
 C1I96_01870 NONE
 C1I96_01865 NONE
 C1I96_01860 NONE
 C1I96_01855 NONE
 C1I96_01850 NONE
 C1I96_01845 NONE
 C1I96_01840  405784 ..  405798 -  -4.2  -2.76315   CGAACAGTCCTAAAT               GGGATA AAA TTTCCC               CGTATGTTTGACGGC  45 5
 C1I96_01835 NONE
 C1I96_01830 NONE
 C1I96_01825 NONE
 C1I96_01820 NONE
 C1I96_01815  401882 ..  401894 -  -3.5  -3.15548   ATGAACGAATAGAGA                TTTAA GGA TTAAA                CAAGCTCCTGCGCCA  46 21
 C1I96_01810 NONE
 C1I96_01805 NONE
 C1I96_01800  399443 ..  399458 -  -4.8  -5.07567   TTATATTTTAAAAAA              GAAATA AAAC TATTTC               TATAACAAATCTTTT  80 110
 C1I96_01790 NONE
 C1I96_01785 NONE
 C1I96_01780 NONE
 C1I96_01775 NONE
 C1I96_01770 NONE
 C1I96_01765 NONE
 C1I96_01760  394522 ..  394541 -    -7  -2.52464   GGGGGTTTCAATCCA            CGCACACC TTGC GGAGCGCG             ACTGGCCGCCCCCCA  56 67
 C1I96_01755 NONE
 C1I96_01750 NONE
 C1I96_01745  391161 ..  391171 -  -2.4  -2.79878   TTCATGGATTCAAAC                 GGGC GTC GCAC                 AGGGCAAGCATGACT  40 1
 C1I96_01740  388387 ..  388416 -  -7.1  -4.21811   CACTGAACACAGAAA       CGCCCCG-GACG AGCAAAA CGTTGCGGGGCG       TTTTCTTTTGGGCGA  73 176
 C1I96_01720  385676 ..  385687 -  -2.2  -3.23235   CAGAGAGGAATTTAA                CATG GTAA CACG                 GTACTATCGTAACCT  43 10
 C1I96_01715  383433 ..  383455 - -12.8   -5.4505   TTTTCTAATAAAAAA           GCCTCTTTCA CCA CGAAAGAGGC           CTAAACGTTTCAGAA 100 56
 C1I96_01710  382949 ..  382966 -  -2.7  -3.73072   AATTGCTGGACCAAA             TGGAATC TTGC GATTTCA              TTTGCGCCATGCTTC  51 23
 C1I96_01705  381267 ..  381287 -  -2.4  -2.75708   CTCGGTGAAAAAAGG            TCGTCACG CACGT CGTGCCGG            GCTTCGCTCCAGGCG  40 141
 C1I96_01700 NONE
 C1I96_01695  380991 ..  381010 - -10.8  -2.71924   CACTTTGTTGGAAAG            CGATTGCT TCTC AGCAATCG             TTTTCTTTGCCACGC  72 80
 C1I96_01690  377980 ..  377996 -  -2.3  -2.95942   TGCACAGGTAAATGA              GACAA GAGCAAG TTGTC              ATTCACGACGGGGAG  42 50
         rrf  377619 ..  377658 - -16.4  -4.72497   GACCGAGCAAGAAAA  GAACAGGCCCCGCGAGTC GAGG GACTGGCGGGGCCTGATG   GAAAAAAATCCCGGC 100 34
 C1I96_01680  376732 ..  376751 -    -5  -2.81905   AGAATACAGAAATAT            GGCACGCCT GTC AGGCAT-CC            TGAAATACCATTCGT  47 16
 C1I96_01675 NONE
 C1I96_01670  374987 ..  375024 - -17.9   -5.1861   TTCATCAGTAAAAAA   CATCGTGGCCGTTCC GGAAAAGA AGAACGGCCACGATG    CCGAAAAAGTTATAA 100 35
        folK NONE
        panB NONE
 C1I96_01655 NONE
 C1I96_01650  371739 ..  371751 -  -4.8  -2.99458   CACCAGAAAACAGGA                GGAG CTGGT CTCC                AAAAATCAAAACTCC  49 65
 C1I96_01635  368821 ..  368847 - -11.6  -5.24129   CTCCTCCACAAAAAA         GCCCCGTTCATA TTT CATGAACGGGGA         TGAGTCAAATGAAGT 100 64
 C1I96_01625  367806 ..  367818 -  -4.1  -4.65263   AGTCCGGAAAAGAAA                CCATC AGA AATGG                AAATGAATTCCACAA  68 50
 C1I96_01615 NONE
 C1I96_01610  365132 ..  365159 - -17.8  -5.37345   TGGAATGAGAAAAAA        CCGCCGCGAATA TGAC CATTCGCGGCGG         TTAAATTAATCAGCG 100 57
 C1I96_01605  364345 ..  364357 -  -3.3  -4.18494   TACCTGGACGGAAAA                GGGCA AAA TGCCG                TTTCTCCAAGTCATC  60 322
 C1I96_01600  363187 ..  363206 -  -6.4  -5.88565   GCCATAAGAAAAAAA            CATCAGCG TTCG CGCTTATG             GCCGCGCAGCATGGC 100 8
 C1I96_01595  362435 ..  362452 -  -5.6  -4.19177   ACTTGGCAAGAGAAA             TTTGGC GCAATA GCCAAA              TATATCACTCTGTGG  66 30
 C1I96_01590  362080 ..  362108 - -10.3   -5.4505   TGCCGGAAGAAAAAA        GCCTCTCGGTT CATAGAC ATCCGAGAGGC        TTCCTGTATTAGGAA 100 97
 C1I96_01585 NONE
 C1I96_01580  359058 ..  359070 -  -3.4  -3.32832   TCCAAAAATAGCTAA                CATG TTCAT CATG                GAGTACTACAGTATT  48 82
 C1I96_01575  358716 ..  358746 -   -17  -4.18018   GCCTTTCAGCTAAAA       TGAACAGGACAGGA AAT TCCCGCCCTGTTCA       TAATGCCGTTCAATT 100 49
 C1I96_01570 NONE
 C1I96_01565  356813 ..  356827 -  -2.7  -4.00526   AACCTGAGAACGAAA               GCCCG GAATG CGTGC               GGATACCGCAGAAAT  56 57
 C1I96_01560  356340 ..  356353 -  -2.3  -2.56164   GCGGGAATTAGGAAC               GATGG GCGG CCTTC                CACTCGTCAGCCTTG  39 4
 C1I96_01555  355478 ..  355506 - -20.4  -3.05384   GTCCCTCTTACGCAA        CGGCCGCCTTTC TTCGG GAAAGGCGGCCG        TTCTTTTTGAAACCG 100 72
 C1I96_01545  352427 ..  352457 - -17.6  -5.00616   CCCTTCCCTAAAAAA       CGCCCCGGTCTCCC TCC AGGAAACCGGGGCA       TCCATAATCACATGG 100 57
 C1I96_01535  349976 ..  349991 -  -2.6  -4.23434   CAAAACATTCCAAAA              CCTTTT CCGC AAAAGA               TCGCACGTCCTCTTC  59 297
 C1I96_01525  348912 ..  348930 -  -2.5  -3.71848   CCTCTTCAGGAACAA             TTTTCCT TCATC AAGAAAA             TGCTGTCATGGAAAC  51 323
 C1I96_01515  348459 ..  348480 -  -4.3  -3.28791   ATTCCCCCGCGACAA           GCACCACCC ATGA AGATGGAGC            CACTGGTCGGAATTG  50 20
 C1I96_01510  348351 ..  348371 -  -3.2  -3.71848   TCCTTGCAGGAACAA           CCG-GATGG TACC CCGTCACGG            GCTCGAACCGTGGAC  53 10
 C1I96_01505  348206 ..  348231 - -10.5  -5.09762   TTGGAATAAATAAAA         TCCGGCTTTGCC ATC AGCA-AGCCGGA         CTAAAAAAGAAATGG 100 38
 C1I96_01500  345809 ..  345823 -  -2.1  -3.34398   CCCCTCCGGGAAATA               TCATC GGCCT GACGA               ATGGGGTTATTCCTC  45 116
 C1I96_01495  344388 ..  344404 -  -4.4  -3.88137   AGAAGTGGGCAGAAA              GCCTCA GAACT TGAAGC              GGACAGCCCCGAAAA  57 12
 C1I96_01485  342234 ..  342248 -    -7  -4.08767   GCCAGGCGTTCAAAA               GGGACG GCG CGGCCC               TCCGGCAGATAGGGA  71 222
        thiD  340931 ..  340950 -  -7.2  -3.06737   TACTAATTCTTAAGA            GCTCCATGT GGC ACATGG-GC            GTGGATACAACTACC  59 155
 C1I96_01470  340547 ..  340568 - -15.1   -5.4492   CAGACATACAAAAAA           CCGCCGCGC AATT GCACGGCGG            TTTGTCAAAACTGTT 100 79
 C1I96_01465  338921 ..  338941 - -12.5  -4.29432   GAAACTTCAGGAAAA            GGAGCAGGG AGC CCCCGCCCC            CGCGAAGCAGGCCGA  95 91
 C1I96_01445  330836 ..  330860 - -11.4   -4.4784   GAAAGGTTAAATAAA          TCAGCCGGCC CACAC GGCCGGCCAA          AGCCGGAACGGCGTT  93 109
 C1I96_01435  327033 ..  327059 - -17.3  -4.24183   TATAAGAAATAATAA         GGCCGCCGCCT TTATC AGGCAGCGGCC         TGTGAATTGACCAGT 100 58
 C1I96_01430  325035 ..  325066 -  -5.1   -4.8622   GGGGGCAATGAAAAA      CTCCTGAACTGGC TTACCG GCCAGGTCATGAA       GGCCGCCAAAGGCAA  80 150
 C1I96_01415  321459 ..  321495 - -16.6  -4.64861   TTTTTTCAAAACAAA    TCCGCCCATGCCGC GGGAACGTG GCGGCATGGGCGGG    AAAAAGCGGGTTCCG 100 56
        rfbB NONE
        rfbA  319399 ..  319410 -  -3.6  -3.90112   TCGCCGGGAAGCAAA                CCGC CCCC ACGG                 AAAACCGCGGGATTT  58 84
 C1I96_01355  309554 ..  309570 -  -3.7  -4.12198   CATAATCCCCTAAAA              GGCAA TCCAAAT TTGCC              GTACGTCCTTAATTT  58 39
        rplS  309076 ..  309102 - -17.3  -5.63517   TCCGGAAATAAAAAA        CCCGGCGCCGCC TCAC GGCGG-GCCGGG         CCAGCAAAATAGCAA 100 50
 C1I96_01280  291704 ..  291714 -    -4  -4.43669   AGTTAAAAAATTAAA                 TTTG GAA CAAA                 AGAAGGAATTAGCGA  66 511
 C1I96_01215 NONE
 C1I96_01210  274939 ..  274958 -  -3.4  -2.78384   CGCCTTTTTATCACA            TTTGGCCG GAAG CGGCCGCA             TAAGCCTCCATCTCA  43 1
 C1I96_01205 NONE
 C1I96_01200  273046 ..  273058 -  -9.1  -3.01712   CCTCTCTGGGCAAGA                GCCTG AAC CAGGC                GGTAGCCCAGTACAA  61 349
 C1I96_01185 NONE
 C1I96_01180  266757 ..  266772 - -10.4  -4.88736   GATTATTCAGAAAAA              CGGGCA TTGC TGCCCG               TTTTTTTATTTTTCT 100 212
 C1I96_01120  247983 ..  248005 -  -7.7  -3.09933   GCCGAACCCATGTAA          CGCCTATCGC TCCG GCGAC-GGCG           GAAGAACTTAAAACG  57 425
 C1I96_01080 NONE
 C1I96_01075 NONE
 C1I96_01070  237020 ..  237055 - -16.4  -4.87892   TGGCAAGAAAATAAA    TTTCCCCCGTCCAC-AT TAC ATGGTAGACGGGGGAAA    GAAATCAGCAATATT 100 40
 C1I96_01065  236403 ..  236419 -  -6.5  -4.46757   AACATACGCAGAAAA              CGCGG TTTTCCT CCGCG              CTGCCCCGGTTCAAA  74 36
        ftsA NONE
 C1I96_01055 NONE
 C1I96_01050 NONE
 C1I96_01045 NONE
 C1I96_01040  231168 ..  231180 -  -2.7  -3.64755   ACAGACGGTTAACAA                CATTA TTT TAACG                AACGGATTCATGATG  51 20
 C1I96_01035  229976 ..  230003 -  -3.4  -4.57341   AATCCCGGGTAAAAA        CCCTGCAATACCG CTC CGGCATTAC-GGC        CTACTATATCCTGAC  67 287
 C1I96_01020  226475 ..  226503 - -15.3  -5.07011   GAGAGAAAGCAAAAA        CCCCGCAACGG AAGAAAA CCGTCGCGGGG        CCATTTTCCCAAATC 100 66
 C1I96_01015 NONE
 C1I96_01010 NONE
 C1I96_01005  222546 ..  222558 -  -5.5  -3.02902   TACTTAAAAACATCA                GTCCC TGG AGGAC                TTGGGATCCAGGGCG  51 10
 C1I96_01000  222128 ..  222141 -  -3.7  -3.08813   CTTCATGGTAAGACA               GCCCG GCGA CGGGA                ATGCGAACGGAAAAA  45 46
 C1I96_00995  221829 ..  221855 -  -2.2  -2.62184   GCCTGTTCCATATCA         CAAGAATGATAC CCG GCCTCCTTCCTG         CTGCGGAAGCTCCCC  39 48
 C1I96_00990 NONE
 C1I96_00985  220417 ..  220428 -  -7.2  -3.03344   AGAAAAAAGGTAAAT                GCCG CCTC CGGC                 GTTCTATTTGAAACG  59 29
 C1I96_00980  219337 ..  219355 -  -8.8  -2.64616   GCGGCAGCCACATCA             TTGTCCCG GGC CGGGACAT             GCAATACGACGGAGT  61 86
 C1I96_00970  217448 ..  217464 -  -7.3  -3.14683   ACAGCGGCTCATTAA              GGAAATC AGG GATCTCC              CGGTGCCGCCGCCCA  57 198
 C1I96_00940  210822 ..  210868 -   -10  -3.53012   CCGTTTTTCCTGAAA CCGCCGGGGCAAAAGATCGGAC GGC GCCCAGTCATTTACCCTGCCGG ATTTTCCGGATAACC  74 10
 C1I96_00935  210305 ..  210336 - -15.2  -3.74693   CCGGATGCCATGAAA      GAGCCTCCGTGCAA ACAT CCGCACGGAAGCTC       TTTCATTAACAGGAT 100 40
 C1I96_00905  203748 ..  203771 - -13.9  -5.36441   CCCGCACATAAAAAA          CCGGAGGGA TTATTT TCCCTCCGG           TTTTCGGATACGGCC 100 52
 C1I96_00885 NONE
 C1I96_00880  201047 ..  201057 -  -2.4  -4.57482   CCAGCCATAAAGAAA                 CCGG AAG CAGG                 AAATATCCCCCGGAA  63 111
 C1I96_00850 NONE
 C1I96_00845 NONE
 C1I96_00840  191298 ..  191322 -  -2.8  -5.00616   CCTTCCCGGAAAAAA          CAAGCCTG CCCCCATTC CCGGCTTG          ATGGCATCCGGTTCC  71 126
 C1I96_00835  190524 ..  190566 -  -4.1  -3.66401   GGGAGAAAGGAAACA CAGGAGTTCCGGAACCGTTCC GGG GAATCGGC-CCGGCA-TCCCG GTCATTCCTCCAACC  55 27
 C1I96_00830 NONE
 C1I96_00825 NONE
 C1I96_00820 NONE
 C1I96_00815 NONE
        tsaA  186303 ..  186320 -  -3.5   -3.9122   TATTTTCTGAAACAA             TTTCTCT ATTG AAAGAAA              AATACCCTAGATTTG  58 153
 C1I96_00795  184123 ..  184135 -  -2.7   -5.0133   TATGCTCCTAAAAAA                TTTCC GCT AGAAA                CCGATAATAATTCTT  74 248
 C1I96_00780  182766 ..  182790 - -14.4  -5.00642   TAACTTAGACAAAAA          CGCTGACTAG GTATT CTAGTCAGCG          TTTTTCATAATATAT 100 55
 C1I96_00770  181947 ..  181959 -  -2.6  -3.55071   TCATATTTTTCCAAA                CCCG TTCCC CGGA                AAAAAGCACGGGCTT  49 44
 C1I96_00765  180254 ..  180264 -  -6.8   -3.0263   AGCACCTGGTCAATA                 TCCG TAT CGGA                 ACCCGGTTCAAAAAT  55 320
 C1I96_00755  175607 ..  175627 -  -9.7  -2.91593   TACGCGCCCAGAAAG            CCGCAGC GGAACAA GCTGCGG            AAACTTACCGCAAAA  65 516
 C1I96_00710 NONE
        rpmG  166157 ..  166168 -  -2.2  -4.02532   TAATAATAAAGATAA                TCGA TAAG CCGA                 ACCAGTTAACGCATT  55 31
        rpsR  165820 ..  165852 - -16.3  -4.86731   TGGGTGGAAATAAAA      CGGGAGTCTGCCCTG TTA CCGGACAAACTCCCG      CCTGCAAAGACAATT 100 70
 C1I96_00695  164978 ..  164988 -  -6.8  -3.86897   GTTATCGTTCATAAA                 TCCG GCG CGGA                 AATGGTTCAGGAACG  66 32
 C1I96_00690 NONE
 C1I96_00685 NONE
 C1I96_00680  162095 ..  162128 -  -5.1  -4.51174   CTACCACAAGCAAAA     CCGGGCGGCGCATCA AACG CGATGCTTCAACCGG      GCAGTTTATGAGCGA  70 124
 C1I96_00640 NONE
 C1I96_00635 NONE
 C1I96_00630  153062 ..  153088 - -17.4  -5.24129   CCCCTCCACAAAAAA         GCCCCGTTCATA TTT CATGAACGGGGC         TATATTAATTTTTCA 100 44
 C1I96_00600  143623 ..  143636 -  -5.9  -3.37259   AAGGAGGGGGAAACA               GCACC GCCC GGCGC                TCCAGAAAAGATTCC  57 109
 C1I96_00590  141303 ..  141327 -  -2.7  -3.86897   TCTAGTGGTGATAAA          CCGTAGGGG TTCGAGT CCCCTCCCG          AGCACCATCCTCTTT  54 245
 C1I96_00585  139936 ..  139946 -  -3.2  -2.65139   AGCAGGGAAGAAGAC                 GAAG GTC CCTC                 CAAAGCTGCCGATTT  40 373
 C1I96_00570  137465 ..  137478 -  -6.7  -3.19602   TGGTTTAGATTAAGA               TGAGG CCTT CCTCA                GGCAAGAAGCAAAAT  57 248
 C1I96_00565 NONE
 C1I96_00560  133869 ..  133897 - -15.3  -4.05714   ATGGTTAATGATAAA        GGCCTCTGCACGC AAT GCATGTAGAGGCC        GGGAAATGGCGGATA 100 322
 C1I96_00555  133221 ..  133273 - -15.5  -4.54449   ATACGGCAGATAAAA CAAGACTCCGTTGCCGGAGCCCTCC ATG GAAAGGCTCCGGCAACAGGGATATG CAGATGTTTACCGCA 100 33
 C1I96_00550 NONE
 C1I96_00545 NONE
 C1I96_00540  131229 ..  131259 - -12.6  -4.54727   GGGTTGAAACGAAAA       CACCCGCTCCCC TGCGAAT GGGAAACGGGTG       TTGAGGGATGAAGAC 100 279
 C1I96_00535 NONE
 C1I96_00530  129833 ..  129845 -  -3.3  -3.21099   CCCTGCCATTATCAA                GCCGA AGG CCAGC                ACGATTCCCCATTTG  46 99
 C1I96_00490  116614 ..  116628 -  -3.5  -2.95307   GAACACAGAGGAAAG               CGGCT ATCAA AGCCA               TGAGGGAGACGCAAA  45 47
 C1I96_00480  115651 ..  115672 -  -5.1  -4.11235   CAATGAGCATAGAAA           GGAAGACGT AACA ACATCTGCC            ATAAAAATATCCCGG  64 45
 C1I96_00470 NONE
 C1I96_00465  111295 ..  111319 -  -5.8  -3.14132   TCTTCGCTTGAGCAA         GAAGAACGGGA GCCT TCCC-TCCTTC          CTCCTGTGATTTCAG  55 459
 C1I96_00460  108985 ..  108997 -  -5.5  -2.80575   AAAAGGGTTATCAGA                GACAG CAC CTGCC                GTGAATGATGAGCTT  49 208
 C1I96_00455  108324 ..  108343 -    -3  -2.97925   ATTTTATATCATACA            TTTTTAAT TTTC ATCAAAAA             ATATGATATAATTAT  43 270
 C1I96_00385   95844 ..   95872 - -12.6  -3.28712   GCTCCGTCCGCAGAA       GCGGGAAGGGAAA GAAC TTTCCCTTCCC-C        ACCATATTCGGAAAG  87 58
 C1I96_00380   95268 ..   95294 -  -6.4   -4.4009   TTTTACGTTAGAAAA         CTCCGCCGTCCG AAC CAGAAGGCGGCA         TGGCCGGCGCCTCCC  74 73
 C1I96_00335   82027 ..   82052 -   -14  -5.75342   CCCTTTCAAAAAAAA         CTCCGCCCGG TTCGTT CCGGACGGAG          TTCGGCGTAAGGCGC 100 56
        recJ   80119 ..   80148 - -13.7  -3.24245   TTATTCACAACTCAA       CGGCCTATTGCTA TTCA CAACAATAGGCCG        TTTTCTACATTTCCC  88 30
 C1I96_00320   78695 ..   78726 -  -6.4  -3.16039   AATCAGTTCCAGTAA      CTGCATTTCCGGGC TGAT GCCCAGAACAGCCG       TGGCTAGTGTCTTGT  57 261
 C1I96_00315   77999 ..   78009 -  -5.4  -3.53855   TTCTTGAAAAATATA                 GAGA TCA TCTC                 CTATTAGGGTTAGAC  56 19
 C1I96_00270   65501 ..   65512 -  -5.8  -3.64703   GCCTTTTCACCCAAA                GGCA CCAA TGCC                 AACTTCGCCAGAATC  58 336
 C1I96_00235   58435 ..   58446 -  -7.2  -3.48276   GTCGCGGCCACACAA                CCGC CTGA GCGG                 GAAACGCCTTTCCCT  64 39
 C1I96_00230   57868 ..   57890 -    -4  -5.28176   TTCAGCCATAAAAAA           CAGCCTTCCG GAA CAGTATGCTG           AAAAACGGATATATC  80 107
 C1I96_00210   48729 ..   48746 -  -2.1  -2.64274   ACGCTCTTAAAGTGA             TTTATTC TGTA AAATAAA              TTTTCAGAATTTTTC  39 9
 C1I96_00205   47042 ..   47055 -  -3.9  -3.87373   TATATCGTGCATAAA               CATAA TGGT TTATG                GATGGATATATTCCA  57 165
 C1I96_00200 NONE
 C1I96_00195   45056 ..   45067 -    -3  -3.80133   CATGCCTATAAAATA                TTCT TTAG AGAA                 GAAGAGTGCAATCTC  54 350
 C1I96_00190   42997 ..   43010 -  -2.4  -3.63054   GAAAGTTATACATAA               GAGA TATTTT TCTC                AAAAGCGGGCCGCTT  50 139
 C1I96_00185   42287 ..   42314 -  -4.8  -3.96148   GCTGTCGAGCATAAA        GGCTC-GGGGGAA TGT TTCCGCAAGAGCC        GTGAGGCCTTTCTTC  59 358
 C1I96_00160   38459 ..   38473 -  -2.1   -4.4261   TTGGCAACAGGAAAA              TGCCGG AAAA CCGG-A               GAAATCCGCCCGTTA  61 38
 C1I96_00155 NONE
 C1I96_00150 NONE
 C1I96_00145   35379 ..   35409 - -17.7  -5.24129   GTTTCCCATAAAAAA       GACTGCCTCCGCT GCAGG AGCGGAGACAGTC       GGGGGCAATATAAAG 100 58
 C1I96_00140   34600 ..   34615 -  -3.2  -3.53811   TTTACCCGGTTGAAA              GGCC GGAGAAAA GGCC               AATCCCCGGAATCCT  50 93
 C1I96_00135   33012 ..   33040 - -16.1  -3.17219   CACAACCTTCACGAA        GGCAGGACATTCC CAA GGAATTTCCTGCC        TTTTTTCCGATGGGA 100 181
        rpoN   24879 ..   24897 -  -4.5  -3.45395   ACAATTCAAAATATA             GGGGACT GTCAT ATTCCCC             GGCGCAGGGAAGCGG  55 15
 C1I96_00095   23516 ..   23552 -  -7.8  -2.83822   GGTAGCGGACAACGA    CGCGCCCGAACCGGCA AAAAA CACCGGCCAGGGCGAG    AAAGCATCCTGACGT  59 56
 C1I96_00075   18976 ..   18991 -    -4  -4.00782   TGAGAGGATGAGAAA              GATGGCG GAC CGC-ATC              AAGAACCTGATGGAG  58 260
 C1I96_00060   15228 ..   15263 -  -2.5  -4.09685   CTGCAGCGTTGAAAA    TTGCCTTTTCCCCCA TCCGTC CGGAGACAGAGGCAA     CATTGTTCATTCTCC  55 212
