locus-tag class description C1O47_00005 PF08299 Bacterial dnaA protein helix-turn-helix C1O47_00005 PF00308 Bacterial dnaA protein C1O47_00005 PF11638 DnaA N-terminal domain C1O47_00010 PF00005 ABC transporter C1O47_00030 PF01784 NIF3 (NGG1p interacting factor 3) C1O47_00035 PF00849 RNA pseudouridylate synthase C1O47_00040 PF01842 ACT domain C1O47_00040 PF00800 Prephenate dehydratase C1O47_00040 PF01817 Chorismate mutase type II C1O47_00050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1O47_00050 PF01653 NAD-dependent DNA ligase adenylation domain C1O47_00050 PF00533 BRCA1 C Terminus (BRCT) domain C1O47_00050 PF03120 NAD-dependent DNA ligase OB-fold domain C1O47_00055 PF01066 CDP-alcohol phosphatidyltransferase C1O47_00065 PF00271 Helicase conserved C-terminal domain C1O47_00065 PF00270 DEAD/DEAH box helicase C1O47_00085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O47_00100 PF07690 Major Facilitator Superfamily C1O47_00105 PF04963 Sigma-54 factor, core binding domain C1O47_00105 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1O47_00105 PF04552 Sigma-54, DNA binding domain C1O47_00120 PF02659 Putative manganese efflux pump C1O47_00140 PF16193 AAA C-terminal domain C1O47_00140 PF12002 MgsA AAA+ ATPase C terminal C1O47_00140 PF00004 ATPase family associated with various cellular activities (AAA) C1O47_00150 PF01370 NAD dependent epimerase/dehydratase family C1O47_00155 PF01636 Phosphotransferase enzyme family C1O47_00175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O47_00175 PF09180 Prolyl-tRNA synthetase, C-terminal C1O47_00175 PF03129 Anticodon binding domain C1O47_00190 PF01527 Transposase C1O47_00225 PF13520 Amino acid permease C1O47_00230 PF04960 Glutaminase C1O47_00245 PF01235 Sodium:alanine symporter family C1O47_00255 PF00472 RF-1 domain C1O47_00255 PF03462 PCRF domain C1O47_00260 PF17827 PrmC N-terminal domain C1O47_00260 PF05175 Methyltransferase small domain C1O47_00265 PF04851 Type III restriction enzyme, res subunit C1O47_00265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1O47_00265 PF17764 3′ DNA-binding domain (3′BD) C1O47_00265 PF00271 Helicase conserved C-terminal domain C1O47_00265 PF18074 Primosomal protein N C-terminal domain C1O47_00270 PF01678 Diaminopimelate epimerase C1O47_00290 PF01209 ubiE/COQ5 methyltransferase family C1O47_00295 PF01554 MatE C1O47_00340 PF01368 DHH family C1O47_00340 PF02272 DHHA1 domain C1O47_00340 PF17768 RecJ OB domain C1O47_00345 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_00345 PF07555 beta-N-acetylglucosaminidase C1O47_00350 PF07555 beta-N-acetylglucosaminidase C1O47_00350 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_00365 PF00005 ABC transporter C1O47_00375 PF02151 UvrB/uvrC motif C1O47_00380 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C1O47_00385 PF10431 C-terminal, D2-small domain, of ClpB protein C1O47_00385 PF00004 ATPase family associated with various cellular activities (AAA) C1O47_00385 PF17871 AAA lid domain C1O47_00385 PF02861 Clp amino terminal domain, pathogenicity island component C1O47_00385 PF07724 AAA domain (Cdc48 subfamily) C1O47_00395 PF00581 Rhodanese-like domain C1O47_00400 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1O47_00405 PF00682 HMGL-like C1O47_00405 PF08502 LeuA allosteric (dimerisation) domain C1O47_00420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1O47_00420 PF02542 YgbB family C1O47_00430 PF00579 tRNA synthetases class I (W and Y) C1O47_00440 PF13277 YmdB-like protein C1O47_00450 PF00899 ThiF family C1O47_00515 PF03793 PASTA domain C1O47_00515 PF00069 Protein kinase domain C1O47_00530 PF18273 Type III R-M EcoP15I C-terminal domain C1O47_00530 PF01555 DNA methylase C1O47_00535 PF08774 VRR-NUC domain C1O47_00535 PF04851 Type III restriction enzyme, res subunit C1O47_00605 PF00294 pfkB family carbohydrate kinase C1O47_00610 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C1O47_00610 PF09297 NADH pyrophosphatase zinc ribbon domain C1O47_00610 PF00293 NUDIX domain C1O47_00620 PF00155 Aminotransferase class I and II C1O47_00625 PF00069 Protein kinase domain C1O47_00630 PF13614 AAA domain C1O47_00635 PF00069 Protein kinase domain C1O47_00675 PF08676 MutL C terminal dimerisation domain C1O47_00675 PF01119 DNA mismatch repair protein, C-terminal domain C1O47_00685 PF04343 Protein of unknown function, DUF488 C1O47_00695 PF03900 Porphobilinogen deaminase, C-terminal domain C1O47_00695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1O47_00700 PF01488 Shikimate / quinate 5-dehydrogenase C1O47_00700 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1O47_00710 PF02649 Type I GTP cyclohydrolase folE2 C1O47_00715 PF01084 Ribosomal protein S18 C1O47_00720 PF00471 Ribosomal protein L33 C1O47_00725 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1O47_00730 PF00480 ROK family C1O47_00735 PF01189 16S rRNA methyltransferase RsmB/F C1O47_00735 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C1O47_00735 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C1O47_00745 PF00293 NUDIX domain C1O47_00750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O47_00750 PF00529 HlyD membrane-fusion protein of T1SS C1O47_00755 PF00005 ABC transporter C1O47_00755 PF12704 MacB-like periplasmic core domain C1O47_00755 PF02687 FtsX-like permease family C1O47_00760 PF00005 ABC transporter C1O47_00760 PF02687 FtsX-like permease family C1O47_00760 PF12704 MacB-like periplasmic core domain C1O47_00765 PF02321 Outer membrane efflux protein C1O47_00780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O47_00780 PF00529 HlyD membrane-fusion protein of T1SS C1O47_00825 PF18389 TrmO C-terminal domain C1O47_00825 PF01980 tRNA-methyltransferase O C1O47_00830 PF01979 Amidohydrolase family C1O47_00835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1O47_00835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1O47_00840 PF00156 Phosphoribosyl transferase domain C1O47_00845 PF00731 AIR carboxylase C1O47_00860 PF04371 Porphyromonas-type peptidyl-arginine deiminase C1O47_00870 PF02163 Peptidase family M50 C1O47_00870 PF17820 PDZ domain C1O47_00875 PF01594 AI-2E family transporter C1O47_00880 PF00884 Sulfatase C1O47_00880 PF16385 Domain of unknown function C1O47_00890 PF04023 FeoA domain C1O47_00890 PF07664 Ferrous iron transport protein B C terminus C1O47_00890 PF17910 FeoB cytosolic helical domain C1O47_00890 PF02421 Ferrous iron transport protein B C1O47_00890 PF07670 Nucleoside recognition C1O47_00930 PF00521 DNA gyrase/topoisomerase IV, subunit A C1O47_00965 PF17762 HTH domain found in ParB protein C1O47_00965 PF02195 ParB-like nuclease domain C1O47_01000 PF13593 SBF-like CPA transporter family (DUF4137) C1O47_01005 PF00579 tRNA synthetases class I (W and Y) C1O47_01005 PF01479 S4 domain C1O47_01025 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_01025 PF12911 N-terminal TM domain of oligopeptide transport permease C C1O47_01030 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_01035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1O47_01045 PF16653 Saccharopine dehydrogenase C-terminal domain C1O47_01045 PF03435 Saccharopine dehydrogenase NADP binding domain C1O47_01075 PF00091 Tubulin/FtsZ family, GTPase domain C1O47_01075 PF12327 FtsZ family, C-terminal domain C1O47_01080 PF02491 SHS2 domain inserted in FTSA C1O47_01090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1O47_01090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1O47_01090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1O47_01090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1O47_01095 PF00664 ABC transporter transmembrane region C1O47_01095 PF00005 ABC transporter C1O47_01100 PF00664 ABC transporter transmembrane region C1O47_01100 PF00005 ABC transporter C1O47_01110 PF02405 Permease MlaE C1O47_01115 PF00005 ABC transporter C1O47_01120 PF02470 MlaD protein C1O47_01145 PF00437 Type II/IV secretion system protein C1O47_01150 PF00437 Type II/IV secretion system protein C1O47_01155 PF00639 PPIC-type PPIASE domain C1O47_01155 PF09312 SurA N-terminal domain C1O47_01170 PF02348 Cytidylyltransferase C1O47_01175 PF00117 Glutamine amidotransferase class-I C1O47_01175 PF06418 CTP synthase N-terminus C1O47_01180 PF00474 Sodium:solute symporter family C1O47_01205 PF13180 PDZ domain C1O47_01210 PF00905 Penicillin binding protein transpeptidase domain C1O47_01210 PF00912 Transglycosylase C1O47_01210 PF17092 Penicillin-binding protein OB-like domain C1O47_01215 PF02646 RmuC family C1O47_01220 PF13419 Haloacid dehalogenase-like hydrolase C1O47_01225 PF00132 Bacterial transferase hexapeptide (six repeats) C1O47_01225 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1O47_01235 PF12704 MacB-like periplasmic core domain C1O47_01235 PF02687 FtsX-like permease family C1O47_01235 PF12704 MacB-like periplasmic core domain C1O47_01235 PF02687 FtsX-like permease family C1O47_01255 PF03527 RHS protein C1O47_01260 PF05488 PAAR motif C1O47_01260 PF05593 RHS Repeat C1O47_01285 PF03527 RHS protein C1O47_01320 PF04389 Peptidase family M28 C1O47_01325 PF13472 GDSL-like Lipase/Acylhydrolase family C1O47_01325 PF07859 alpha/beta hydrolase fold C1O47_01330 PF00133 tRNA synthetases class I (I, L, M and V) C1O47_01330 PF08264 Anticodon-binding domain of tRNA C1O47_01335 PF01252 Signal peptidase (SPase) II C1O47_01350 PF00266 Aminotransferase class-V C1O47_01365 PF00069 Protein kinase domain C1O47_01365 PF08308 PEGA domain C1O47_01375 PF01245 Ribosomal protein L19 C1O47_01390 PF01039 Carboxyl transferase domain C1O47_01400 PF00364 Biotin-requiring enzyme C1O47_01400 PF02436 Conserved carboxylase domain C1O47_01400 PF00289 Biotin carboxylase, N-terminal domain C1O47_01400 PF00682 HMGL-like C1O47_01400 PF02785 Biotin carboxylase C-terminal domain C1O47_01400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O47_01405 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C1O47_01410 PF02237 Biotin protein ligase C terminal domain C1O47_01410 PF08279 HTH domain C1O47_01410 PF03099 Biotin/lipoate A/B protein ligase family C1O47_01415 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1O47_01415 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1O47_01430 PF00483 Nucleotidyl transferase C1O47_01435 PF16363 GDP-mannose 4,6 dehydratase C1O47_01440 PF00365 Phosphofructokinase C1O47_01450 PF02637 GatB domain C1O47_01450 PF02934 GatB/GatE catalytic domain C1O47_01455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O47_01455 PF00205 Thiamine pyrophosphate enzyme, central domain C1O47_01455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1O47_01475 PF00690 Cation transporter/ATPase, N-terminus C1O47_01475 PF00689 Cation transporting ATPase, C-terminus C1O47_01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O47_01480 PF00529 HlyD membrane-fusion protein of T1SS C1O47_01485 PF00873 AcrB/AcrD/AcrF family C1O47_01490 PF00939 Sodium:sulfate symporter transmembrane region C1O47_01500 PF08543 Phosphomethylpyrimidine kinase C1O47_01565 PF01327 Polypeptide deformylase C1O47_01570 PF08240 Alcohol dehydrogenase GroES-like domain C1O47_01570 PF00107 Zinc-binding dehydrogenase C1O47_01575 PF00343 Carbohydrate phosphorylase C1O47_01575 PF11897 Protein of unknown function (DUF3417) C1O47_01580 PF00027 Cyclic nucleotide-binding domain C1O47_01580 PF00520 Ion transport protein C1O47_01585 PF03960 ArsC family C1O47_01590 PF10996 Beta-Casp domain C1O47_01590 PF00753 Metallo-beta-lactamase superfamily C1O47_01590 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O47_01610 PF01479 S4 domain C1O47_01610 PF00849 RNA pseudouridylate synthase C1O47_01620 PF01746 tRNA (Guanine-1)-methyltransferase C1O47_01625 PF03462 PCRF domain C1O47_01625 PF00472 RF-1 domain C1O47_01635 PF00575 S1 RNA binding domain C1O47_01685 PF02548 Ketopantoate hydroxymethyltransferase C1O47_01690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1O47_01695 PF05173 Dihydrodipicolinate reductase, C-terminus C1O47_01695 PF01113 Dihydrodipicolinate reductase, N-terminus C1O47_01700 PF00701 Dihydrodipicolinate synthetase family C1O47_01740 PF00578 AhpC/TSA family C1O47_01820 PF17185 NlpE C-terminal OB domain C1O47_01820 PF04170 NlpE N-terminal domain C1O47_01890 PF03796 DnaB-like helicase C terminal domain C1O47_01890 PF00772 DnaB-like helicase N terminal domain C1O47_01990 PF02899 Phage integrase, N-terminal SAM-like domain C1O47_01990 PF00589 Phage integrase family C1O47_02000 PF02130 Uncharacterized protein family UPF0054 C1O47_02000 PF07883 Cupin domain C1O47_02005 PF07697 7TM-HD extracellular C1O47_02005 PF01966 HD domain C1O47_02005 PF07698 7TM receptor with intracellular HD hydrolase C1O47_02010 PF02504 Fatty acid synthesis protein C1O47_02015 PF01783 Ribosomal L32p protein family C1O47_02025 PF01230 HIT domain C1O47_02030 PF03481 Putative GTP-binding controlling metal-binding C1O47_02030 PF01300 Telomere recombination C1O47_02035 PF01202 Shikimate kinase C1O47_02040 PF00886 Ribosomal protein S16 C1O47_02055 PF02899 Phage integrase, N-terminal SAM-like domain C1O47_02055 PF00589 Phage integrase family C1O47_02070 PF02699 Preprotein translocase subunit C1O47_02080 PF02390 Putative methyltransferase C1O47_02090 PF05036 Sporulation related domain C1O47_02090 PF03330 Lytic transglycolase C1O47_02095 PF01351 Ribonuclease HII C1O47_02095 PF11858 Domain of unknown function (DUF3378) C1O47_02100 PF00216 Bacterial DNA-binding protein C1O47_02135 PF01618 MotA/TolQ/ExbB proton channel family C1O47_02155 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O47_02155 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1O47_02155 PF00703 Glycosyl hydrolases family 2 C1O47_02155 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O47_02155 PF16355 Domain of unknown function (DUF4982) C1O47_02160 PF10458 Valyl tRNA synthetase tRNA binding arm C1O47_02160 PF08264 Anticodon-binding domain of tRNA C1O47_02160 PF00133 tRNA synthetases class I (I, L, M and V) C1O47_02170 PF00238 Ribosomal protein L14p/L23e C1O47_02175 PF00366 Ribosomal protein S17 C1O47_02180 PF00831 Ribosomal L29 protein C1O47_02185 PF00252 Ribosomal protein L16p/L10e C1O47_02190 PF00189 Ribosomal protein S3, C-terminal domain C1O47_02190 PF07650 KH domain C1O47_02195 PF00237 Ribosomal protein L22p/L17e C1O47_02205 PF00203 Ribosomal protein S19 C1O47_02210 PF00181 Ribosomal Proteins L2, RNA binding domain C1O47_02210 PF03947 Ribosomal Proteins L2, C-terminal domain C1O47_02215 PF00276 Ribosomal protein L23 C1O47_02220 PF00573 Ribosomal protein L4/L1 family C1O47_02225 PF00297 Ribosomal protein L3 C1O47_02230 PF00338 Ribosomal protein S10p/S20e C1O47_02235 PF00679 Elongation factor G C-terminus C1O47_02235 PF14492 Elongation Factor G, domain II C1O47_02235 PF03144 Elongation factor Tu domain 2 C1O47_02235 PF00009 Elongation factor Tu GTP binding domain C1O47_02235 PF03764 Elongation factor G, domain IV C1O47_02240 PF00177 Ribosomal protein S7p/S5e C1O47_02245 PF00164 Ribosomal protein S12/S23 C1O47_02255 PF01676 Metalloenzyme superfamily C1O47_02255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1O47_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_02265 PF00512 His Kinase A (phospho-acceptor) domain C1O47_02265 PF00989 PAS fold C1O47_02270 PF02954 Bacterial regulatory protein, Fis family C1O47_02270 PF00158 Sigma-54 interaction domain C1O47_02270 PF00072 Response regulator receiver domain C1O47_02280 PF02609 Exonuclease VII small subunit C1O47_02285 PF02780 Transketolase, C-terminal domain C1O47_02285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1O47_02285 PF02779 Transketolase, pyrimidine binding domain C1O47_02300 PF03739 Lipopolysaccharide export system permease LptF/LptG C1O47_02305 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1O47_02305 PF01926 50S ribosome-binding GTPase C1O47_02310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O47_02310 PF00005 ABC transporter C1O47_02335 PF12704 MacB-like periplasmic core domain C1O47_02335 PF02687 FtsX-like permease family C1O47_02335 PF00005 ABC transporter C1O47_02345 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1O47_02345 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1O47_02380 PF11412 Disulphide bond corrector protein DsbC C1O47_02380 PF02683 Cytochrome C biogenesis protein transmembrane region C1O47_02395 PF05192 MutS domain III C1O47_02395 PF05190 MutS family domain IV C1O47_02395 PF05188 MutS domain II C1O47_02395 PF00488 MutS domain V C1O47_02395 PF01624 MutS domain I C1O47_02410 PF17862 AAA+ lid domain C1O47_02410 PF00004 ATPase family associated with various cellular activities (AAA) C1O47_02410 PF01434 Peptidase family M41 C1O47_02430 PF00378 Enoyl-CoA hydratase/isomerase C1O47_02480 PF00005 ABC transporter C1O47_02495 PF00005 ABC transporter C1O47_02495 PF12857 TOBE-like domain C1O47_02505 PF00106 short chain dehydrogenase C1O47_02520 PF02954 Bacterial regulatory protein, Fis family C1O47_02520 PF00158 Sigma-54 interaction domain C1O47_02520 PF01590 GAF domain C1O47_02525 PF00654 Voltage gated chloride channel C1O47_02535 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_02535 PF07691 PA14 domain C1O47_02535 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_02550 PF00282 Pyridoxal-dependent decarboxylase conserved domain C1O47_02560 PF01336 OB-fold nucleic acid binding domain C1O47_02560 PF02811 PHP domain C1O47_02560 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1O47_02560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1O47_02560 PF14579 Helix-hairpin-helix motif C1O47_02565 PF01180 Dihydroorotate dehydrogenase C1O47_02570 PF02581 Thiamine monophosphate synthase C1O47_02590 PF01595 Cyclin M transmembrane N-terminal domain C1O47_02590 PF03471 Transporter associated domain C1O47_02590 PF00571 CBS domain C1O47_02595 PF01595 Cyclin M transmembrane N-terminal domain C1O47_02595 PF03471 Transporter associated domain C1O47_02595 PF00571 CBS domain C1O47_02600 PF00013 KH domain C1O47_02600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1O47_02600 PF01138 3' exoribonuclease family, domain 1 C1O47_02600 PF03725 3' exoribonuclease family, domain 2 C1O47_02600 PF00575 S1 RNA binding domain C1O47_02605 PF00312 Ribosomal protein S15 C1O47_02635 PF01416 tRNA pseudouridine synthase C1O47_02640 PF01467 Cytidylyltransferase-like C1O47_02660 PF07963 Prokaryotic N-terminal methylation motif C1O47_02660 PF14245 Type IV pilin PilA C1O47_02665 PF01138 3' exoribonuclease family, domain 1 C1O47_02665 PF03725 3' exoribonuclease family, domain 2 C1O47_02675 PF07691 PA14 domain C1O47_02675 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_02675 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_02685 PF02457 DisA bacterial checkpoint controller nucleotide-binding C1O47_02700 PF00005 ABC transporter C1O47_02705 PF02569 Pantoate-beta-alanine ligase C1O47_02715 PF00132 Bacterial transferase hexapeptide (six repeats) C1O47_02715 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1O47_02720 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_02725 PF00005 ABC transporter C1O47_02740 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_02740 PF07555 beta-N-acetylglucosaminidase C1O47_02750 PF13580 SIS domain C1O47_02755 PF00294 pfkB family carbohydrate kinase C1O47_02755 PF01467 Cytidylyltransferase-like C1O47_02765 PF01165 Ribosomal protein S21 C1O47_02770 PF00202 Aminotransferase class-III C1O47_02780 PF00083 Sugar (and other) transporter C1O47_02795 PF00925 GTP cyclohydrolase II C1O47_02795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1O47_02800 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1O47_02805 PF01029 NusB family C1O47_02810 PF02881 SRP54-type protein, helical bundle domain C1O47_02810 PF00448 SRP54-type protein, GTPase domain C1O47_02815 PF04055 Radical SAM superfamily C1O47_02820 PF00772 DnaB-like helicase N terminal domain C1O47_02820 PF03796 DnaB-like helicase C terminal domain C1O47_02830 PF04191 Phospholipid methyltransferase C1O47_02835 PF00994 Probable molybdopterin binding domain C1O47_02835 PF02464 Competence-damaged protein C1O47_02835 PF18146 Damage-inducible protein CinA KH domain C1O47_02840 PF00391 PEP-utilising enzyme, mobile domain C1O47_02840 PF00224 Pyruvate kinase, barrel domain C1O47_02840 PF02887 Pyruvate kinase, alpha/beta domain C1O47_02845 PF00583 Acetyltransferase (GNAT) family C1O47_02870 PF00163 Ribosomal protein S4/S9 N-terminal domain C1O47_02870 PF01479 S4 domain C1O47_02875 PF00411 Ribosomal protein S11 C1O47_02880 PF00416 Ribosomal protein S13/S18 C1O47_02885 PF08331 Domain of unknown function (DUF1730) C1O47_02900 PF17782 DprA winged helix domain C1O47_02900 PF02481 DNA recombination-mediator protein A C1O47_02905 PF07943 Penicillin-binding protein 5, C-terminal domain C1O47_02905 PF00768 D-alanyl-D-alanine carboxypeptidase C1O47_02910 PF01926 50S ribosome-binding GTPase C1O47_02910 PF06071 Protein of unknown function (DUF933) C1O47_02920 PF01597 Glycine cleavage H-protein C1O47_02925 PF02347 Glycine cleavage system P-protein C1O47_02940 PF00884 Sulfatase C1O47_02940 PF16385 Domain of unknown function C1O47_02950 PF00271 Helicase conserved C-terminal domain C1O47_02950 PF03880 DbpA RNA binding domain C1O47_02950 PF00270 DEAD/DEAH box helicase C1O47_02970 PF07681 DoxX C1O47_02975 PF02769 AIR synthase related protein, C-terminal domain C1O47_02975 PF00586 AIR synthase related protein, N-terminal domain C1O47_02980 PF00156 Phosphoribosyl transferase domain C1O47_02985 PF08281 Sigma-70, region 4 C1O47_02985 PF04542 Sigma-70 region 2 C1O47_03005 PF02441 Flavoprotein C1O47_03025 PF03976 Polyphosphate kinase 2 (PPK2) C1O47_03030 PF08220 DeoR-like helix-turn-helix domain C1O47_03030 PF00455 DeoR C terminal sensor domain C1O47_03045 PF00266 Aminotransferase class-V C1O47_03050 PF04127 DNA / pantothenate metabolism flavoprotein C1O47_03050 PF02441 Flavoprotein C1O47_03055 PF03193 RsgA GTPase C1O47_03090 PF03976 Polyphosphate kinase 2 (PPK2) C1O47_03100 PF08305 NPCBM/NEW2 domain C1O47_03110 PF12146 Serine aminopeptidase, S33 C1O47_03115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1O47_03125 PF01016 Ribosomal L27 protein C1O47_03130 PF01475 Ferric uptake regulator family C1O47_03135 PF00005 ABC transporter C1O47_03140 PF01458 Uncharacterized protein family (UPF0051) C1O47_03145 PF01458 Uncharacterized protein family (UPF0051) C1O47_03155 PF00884 Sulfatase C1O47_03160 PF06968 Biotin and Thiamin Synthesis associated domain C1O47_03160 PF04055 Radical SAM superfamily C1O47_03165 PF00202 Aminotransferase class-III C1O47_03195 PF00535 Glycosyl transferase family 2 C1O47_03205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1O47_03225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1O47_03225 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1O47_03230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O47_03230 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1O47_03235 PF00231 ATP synthase C1O47_03240 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1O47_03240 PF00306 ATP synthase alpha/beta chain, C terminal domain C1O47_03240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O47_03245 PF00213 ATP synthase delta (OSCP) subunit C1O47_03250 PF00430 ATP synthase B/B' CF(0) C1O47_03255 PF00137 ATP synthase subunit C C1O47_03260 PF00119 ATP synthase A chain C1O47_03270 PF00905 Penicillin binding protein transpeptidase domain C1O47_03270 PF03717 Penicillin-binding Protein dimerisation domain C1O47_03310 PF00899 ThiF family C1O47_03315 PF01380 SIS domain C1O47_03315 PF00571 CBS domain C1O47_03335 PF06426 Serine acetyltransferase, N-terminal C1O47_03335 PF00132 Bacterial transferase hexapeptide (six repeats) C1O47_03345 PF00171 Aldehyde dehydrogenase family C1O47_03350 PF00696 Amino acid kinase family C1O47_03350 PF01472 PUA domain C1O47_03355 PF02779 Transketolase, pyrimidine binding domain C1O47_03355 PF02780 Transketolase, C-terminal domain C1O47_03355 PF00456 Transketolase, thiamine diphosphate binding domain C1O47_03360 PF03449 Transcription elongation factor, N-terminal C1O47_03360 PF01272 Transcription elongation factor, GreA/GreB, C-term C1O47_03365 PF01259 SAICAR synthetase C1O47_03375 PF00586 AIR synthase related protein, N-terminal domain C1O47_03375 PF02769 AIR synthase related protein, C-terminal domain C1O47_03375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1O47_03390 PF05343 M42 glutamyl aminopeptidase C1O47_03400 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1O47_03400 PF00703 Glycosyl hydrolases family 2 C1O47_03400 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O47_03400 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O47_03410 PF10150 Ribonuclease E/G family C1O47_03410 PF00575 S1 RNA binding domain C1O47_03440 PF02472 Biopolymer transport protein ExbD/TolR C1O47_03455 PF00730 HhH-GPD superfamily base excision DNA repair protein C1O47_03480 PF00218 Indole-3-glycerol phosphate synthase C1O47_03485 PF02021 Uncharacterised protein family UPF0102 C1O47_03490 PF01351 Ribonuclease HII C1O47_03495 PF03471 Transporter associated domain C1O47_03495 PF01595 Cyclin M transmembrane N-terminal domain C1O47_03495 PF00571 CBS domain C1O47_03505 PF00253 Ribosomal protein S14p/S29e C1O47_03525 PF00764 Arginosuccinate synthase C1O47_03530 PF00884 Sulfatase C1O47_03535 PF01029 NusB family C1O47_03535 PF01189 16S rRNA methyltransferase RsmB/F C1O47_03540 PF00121 Triosephosphate isomerase C1O47_03555 PF00884 Sulfatase C1O47_03585 PF03819 MazG nucleotide pyrophosphohydrolase domain C1O47_03595 PF01612 3'-5' exonuclease C1O47_03595 PF00570 HRDC domain C1O47_03610 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1O47_03620 PF00675 Insulinase (Peptidase family M16) C1O47_03620 PF05193 Peptidase M16 inactive domain C1O47_03640 PF02677 Epoxyqueuosine reductase QueH C1O47_03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1O47_03645 PF03466 LysR substrate binding domain C1O47_03650 PF02219 Methylenetetrahydrofolate reductase C1O47_03675 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C1O47_03675 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O47_03680 PF03734 L,D-transpeptidase catalytic domain C1O47_03705 PF00585 C-terminal regulatory domain of Threonine dehydratase C1O47_03705 PF00291 Pyridoxal-phosphate dependent enzyme C1O47_03710 PF02545 Maf-like protein C1O47_03715 PF16360 GTP-binding GTPase Middle Region C1O47_03715 PF01926 50S ribosome-binding GTPase C1O47_03715 PF13167 GTP-binding GTPase N-terminal C1O47_03720 PF00069 Protein kinase domain C1O47_03735 PF02769 AIR synthase related protein, C-terminal domain C1O47_03735 PF00586 AIR synthase related protein, N-terminal domain C1O47_03745 PF02224 Cytidylate kinase C1O47_03755 PF02463 RecF/RecN/SMC N terminal domain C1O47_03765 PF14622 Ribonuclease-III-like C1O47_03765 PF00035 Double-stranded RNA binding motif C1O47_03780 PF03372 Endonuclease/Exonuclease/phosphatase family C1O47_03785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1O47_03800 PF01502 Phosphoribosyl-AMP cyclohydrolase C1O47_03805 PF09115 DNA polymerase III, delta subunit, C terminal C1O47_03820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O47_03820 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1O47_03820 PF02142 MGS-like domain C1O47_03835 PF08241 Methyltransferase domain C1O47_03840 PF00795 Carbon-nitrogen hydrolase C1O47_03840 PF02540 NAD synthase C1O47_03845 PF00893 Small Multidrug Resistance protein C1O47_03910 PF05491 RuvB C-terminal winged helix domain C1O47_03910 PF17864 RuvB AAA lid domain C1O47_03910 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1O47_03915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1O47_03915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1O47_03920 PF00175 Oxidoreductase NAD-binding domain C1O47_03920 PF00258 Flavodoxin C1O47_03920 PF00667 FAD binding domain C1O47_03925 PF00535 Glycosyl transferase family 2 C1O47_03930 PF00535 Glycosyl transferase family 2 C1O47_03955 PF00534 Glycosyl transferases group 1 C1O47_03965 PF01757 Acyltransferase family C1O47_03990 PF10396 GTP-binding protein TrmE N-terminus C1O47_03990 PF01926 50S ribosome-binding GTPase C1O47_03990 PF12631 MnmE helical domain C1O47_04000 PF03458 UPF0126 domain C1O47_04005 PF10996 Beta-Casp domain C1O47_04005 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O47_04005 PF00753 Metallo-beta-lactamase superfamily C1O47_04010 PF02381 MraZ protein, putative antitoxin-like C1O47_04015 PF01795 MraW methylase family C1O47_04025 PF00905 Penicillin binding protein transpeptidase domain C1O47_04025 PF03717 Penicillin-binding Protein dimerisation domain C1O47_04025 PF03793 PASTA domain C1O47_04030 PF01225 Mur ligase family, catalytic domain C1O47_04030 PF02875 Mur ligase family, glutamate ligase domain C1O47_04030 PF08245 Mur ligase middle domain C1O47_04035 PF08245 Mur ligase middle domain C1O47_04035 PF01225 Mur ligase family, catalytic domain C1O47_04035 PF02875 Mur ligase family, glutamate ligase domain C1O47_04040 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1O47_04040 PF00953 Glycosyl transferase family 4 C1O47_04045 PF02875 Mur ligase family, glutamate ligase domain C1O47_04045 PF08245 Mur ligase middle domain C1O47_04055 PF01098 Cell cycle protein C1O47_04060 PF04101 Glycosyltransferase family 28 C-terminal domain C1O47_04060 PF03033 Glycosyltransferase family 28 N-terminal domain C1O47_04065 PF01225 Mur ligase family, catalytic domain C1O47_04065 PF08245 Mur ligase middle domain C1O47_04065 PF02875 Mur ligase family, glutamate ligase domain C1O47_04070 PF01820 D-ala D-ala ligase N-terminus C1O47_04070 PF07478 D-ala D-ala ligase C-terminus C1O47_04080 PF00154 recA bacterial DNA recombination protein C1O47_04085 PF01520 N-acetylmuramoyl-L-alanine amidase C1O47_04090 PF03099 Biotin/lipoate A/B protein ligase family C1O47_04095 PF00330 Aconitase family (aconitate hydratase) C1O47_04100 PF00694 Aconitase C-terminal domain C1O47_04110 PF13180 PDZ domain C1O47_04110 PF17820 PDZ domain C1O47_04120 PF01761 3-dehydroquinate synthase C1O47_04130 PF00005 ABC transporter C1O47_04130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O47_04140 PF00889 Elongation factor TS C1O47_04155 PF00793 DAHP synthetase I family C1O47_04170 PF00005 ABC transporter C1O47_04170 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1O47_04180 PF02875 Mur ligase family, glutamate ligase domain C1O47_04180 PF01225 Mur ligase family, catalytic domain C1O47_04180 PF08245 Mur ligase middle domain C1O47_04185 PF00691 OmpA family C1O47_04190 PF13361 UvrD-like helicase C-terminal domain C1O47_04190 PF00580 UvrD/REP helicase N-terminal domain C1O47_04210 PF00152 tRNA synthetases class II (D, K and N) C1O47_04210 PF01336 OB-fold nucleic acid binding domain C1O47_04220 PF00085 Thioredoxin C1O47_04265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1O47_04265 PF03466 LysR substrate binding domain C1O47_04270 PF03601 Conserved hypothetical protein 698 C1O47_04275 PF00266 Aminotransferase class-V C1O47_04290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1O47_04290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1O47_04290 PF01842 ACT domain C1O47_04300 PF04055 Radical SAM superfamily C1O47_04305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O47_04305 PF07498 Rho termination factor, N-terminal domain C1O47_04305 PF07497 Rho termination factor, RNA-binding domain C1O47_04310 PF01709 Transcriptional regulator C1O47_04315 PF16916 Dimerisation domain of Zinc Transporter C1O47_04315 PF01545 Cation efflux family C1O47_04320 PF00999 Sodium/hydrogen exchanger family C1O47_04320 PF02254 TrkA-N domain C1O47_04330 PF02547 Queuosine biosynthesis protein C1O47_04335 PF12127 SigmaW regulon antibacterial C1O47_04345 PF05690 Thiazole biosynthesis protein ThiG C1O47_04350 PF13520 Amino acid permease C1O47_04360 PF01594 AI-2E family transporter C1O47_04365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1O47_04365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1O47_04370 PF01116 Fructose-bisphosphate aldolase class-II C1O47_04380 PF01063 Amino-transferase class IV C1O47_04385 PF00722 Glycosyl hydrolases family 16 C1O47_04390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1O47_04390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1O47_04405 PF01018 GTP1/OBG C1O47_04405 PF01926 50S ribosome-binding GTPase C1O47_04410 PF01636 Phosphotransferase enzyme family C1O47_04450 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1O47_04455 PF00478 IMP dehydrogenase / GMP reductase domain C1O47_04455 PF00571 CBS domain C1O47_04465 PF01381 Helix-turn-helix C1O47_04465 PF00145 C-5 cytosine-specific DNA methylase C1O47_04470 PF09019 EcoRII C terminal C1O47_04470 PF09217 Restriction endonuclease EcoRII, N-terminal C1O47_04475 PF03852 DNA mismatch endonuclease Vsr C1O47_04480 PF12464 Maltose acetyltransferase C1O47_04480 PF14602 Hexapeptide repeat of succinyl-transferase C1O47_04485 PF13419 Haloacid dehalogenase-like hydrolase C1O47_04510 PF00793 DAHP synthetase I family C1O47_04515 PF00114 Pilin (bacterial filament) C1O47_04515 PF07963 Prokaryotic N-terminal methylation motif C1O47_04525 PF02261 Aspartate decarboxylase C1O47_04530 PF01687 Riboflavin kinase C1O47_04530 PF06574 FAD synthetase C1O47_04535 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1O47_04535 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1O47_04550 PF00149 Calcineurin-like phosphoesterase C1O47_04555 PF08759 Glycosyltransferase GT-D fold C1O47_04555 PF01501 Glycosyl transferase family 8 C1O47_04560 PF01501 Glycosyl transferase family 8 C1O47_04560 PF00535 Glycosyl transferase family 2 C1O47_04570 PF01370 NAD dependent epimerase/dehydratase family C1O47_04575 PF00535 Glycosyl transferase family 2 C1O47_04595 PF01757 Acyltransferase family C1O47_04615 PF03600 Citrate transporter C1O47_04615 PF02080 TrkA-C domain C1O47_04650 PF01301 Glycosyl hydrolases family 35 C1O47_04655 PF00300 Histidine phosphatase superfamily (branch 1) C1O47_04660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1O47_04660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1O47_04670 PF07690 Major Facilitator Superfamily C1O47_04675 PF03061 Thioesterase superfamily C1O47_04695 PF00565 Staphylococcal nuclease homologue C1O47_04710 PF02195 ParB-like nuclease domain C1O47_04715 PF01507 Phosphoadenosine phosphosulfate reductase family C1O47_04715 PF11922 Domain of unknown function (DUF3440) C1O47_04730 PF00180 Isocitrate/isopropylmalate dehydrogenase C1O47_04745 PF13335 Magnesium chelatase, subunit ChlI C-terminal C1O47_04745 PF01078 Magnesium chelatase, subunit ChlI C1O47_04755 PF01053 Cys/Met metabolism PLP-dependent enzyme C1O47_04765 PF04055 Radical SAM superfamily C1O47_04765 PF13186 Iron-sulfur cluster-binding domain C1O47_04780 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1O47_04780 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1O47_04785 PF02660 Glycerol-3-phosphate acyltransferase C1O47_04795 PF01336 OB-fold nucleic acid binding domain C1O47_04795 PF00152 tRNA synthetases class II (D, K and N) C1O47_04815 PF01638 HxlR-like helix-turn-helix C1O47_04825 PF00977 Histidine biosynthesis protein C1O47_04835 PF02386 Cation transport protein C1O47_04845 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C1O47_04845 PF11898 Domain of unknown function (DUF3418) C1O47_04845 PF00270 DEAD/DEAH box helicase C1O47_04845 PF04408 Helicase associated domain (HA2) C1O47_04845 PF00271 Helicase conserved C-terminal domain C1O47_04850 PF10369 Small subunit of acetolactate synthase C1O47_04855 PF13180 PDZ domain C1O47_04855 PF00595 PDZ domain C1O47_04865 PF01134 Glucose inhibited division protein A C1O47_04865 PF13932 GidA associated domain C1O47_04870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1O47_04870 PF01872 RibD C-terminal domain C1O47_04875 PF02768 DNA polymerase III beta subunit, C-terminal domain C1O47_04875 PF02767 DNA polymerase III beta subunit, central domain C1O47_04875 PF00712 DNA polymerase III beta subunit, N-terminal domain C1O47_04900 PF01476 LysM domain C1O47_04900 PF00877 NlpC/P60 family C1O47_04905 PF01026 TatD related DNase C1O47_04915 PF16353 Domain of unknown function(DUF4981) C1O47_04915 PF00703 Glycosyl hydrolases family 2 C1O47_04915 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O47_04915 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O47_04915 PF02929 Beta galactosidase small chain C1O47_04930 PF00512 His Kinase A (phospho-acceptor) domain C1O47_04930 PF02702 Osmosensitive K+ channel His kinase sensor domain C1O47_04930 PF13492 GAF domain C1O47_04930 PF13493 Domain of unknown function (DUF4118) C1O47_04930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_04935 PF00486 Transcriptional regulatory protein, C terminal C1O47_04935 PF00072 Response regulator receiver domain C1O47_04945 PF03814 Potassium-transporting ATPase A subunit C1O47_04955 PF02669 K+-transporting ATPase, c chain C1O47_04970 PF17871 AAA lid domain C1O47_04970 PF10431 C-terminal, D2-small domain, of ClpB protein C1O47_04970 PF02861 Clp amino terminal domain, pathogenicity island component C1O47_04970 PF00004 ATPase family associated with various cellular activities (AAA) C1O47_04970 PF07724 AAA domain (Cdc48 subfamily) C1O47_05020 PF03477 ATP cone domain C1O47_05030 PF01740 STAS domain C1O47_05030 PF00916 Sulfate permease family C1O47_05035 PF14698 Argininosuccinate lyase C-terminal C1O47_05035 PF00206 Lyase C1O47_05055 PF03952 Enolase, N-terminal domain C1O47_05055 PF00113 Enolase, C-terminal TIM barrel domain C1O47_05060 PF01261 Xylose isomerase-like TIM barrel C1O47_05065 PF02973 Sialidase, N-terminal domain C1O47_05065 PF13088 BNR repeat-like domain C1O47_05065 PF00754 F5/8 type C domain C1O47_05070 PF01966 HD domain C1O47_05070 PF01336 OB-fold nucleic acid binding domain C1O47_05080 PF04055 Radical SAM superfamily C1O47_05080 PF01938 TRAM domain C1O47_05080 PF00919 Uncharacterized protein family UPF0004 C1O47_05085 PF01938 TRAM domain C1O47_05085 PF05958 tRNA (Uracil-5-)-methyltransferase C1O47_05100 PF12161 HsdM N-terminal domain C1O47_05100 PF02384 N-6 DNA Methylase C1O47_05105 PF01420 Type I restriction modification DNA specificity domain C1O47_05115 PF12008 Type I restriction and modification enzyme - subunit R C terminal C1O47_05115 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C1O47_05115 PF18766 SWI2/SNF2 ATPase C1O47_05125 PF00216 Bacterial DNA-binding protein C1O47_05130 PF16875 Glycosyl hydrolase family 36 N-terminal domain C1O47_05130 PF16874 Glycosyl hydrolase family 36 C-terminal domain C1O47_05150 PF02080 TrkA-C domain C1O47_05150 PF06826 Predicted Permease Membrane Region C1O47_05160 PF00989 PAS fold C1O47_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_05160 PF00512 His Kinase A (phospho-acceptor) domain C1O47_05190 PF08019 Phosphoethanolamine transferase EptA/EptB C1O47_05190 PF00884 Sulfatase C1O47_05200 PF02915 Rubrerythrin C1O47_05210 PF05343 M42 glutamyl aminopeptidase C1O47_05215 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_05215 PF07691 PA14 domain C1O47_05215 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_05225 PF00245 Alkaline phosphatase C1O47_05230 PF01741 Large-conductance mechanosensitive channel, MscL C1O47_05235 PF00202 Aminotransferase class-III C1O47_05245 PF09285 Elongation factor P, C-terminal C1O47_05245 PF08207 Elongation factor P (EF-P) KOW-like domain C1O47_05245 PF01132 Elongation factor P (EF-P) OB domain C1O47_05255 PF00403 Heavy-metal-associated domain C1O47_05260 PF02463 RecF/RecN/SMC N terminal domain C1O47_05265 PF12706 Beta-lactamase superfamily domain C1O47_05265 PF03099 Biotin/lipoate A/B protein ligase family C1O47_05270 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1O47_05300 PF02817 e3 binding domain C1O47_05300 PF00364 Biotin-requiring enzyme C1O47_05300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O47_05305 PF02779 Transketolase, pyrimidine binding domain C1O47_05305 PF02780 Transketolase, C-terminal domain C1O47_05310 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1O47_05310 PF02779 Transketolase, pyrimidine binding domain C1O47_05310 PF02780 Transketolase, C-terminal domain C1O47_05325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O47_05325 PF00529 HlyD membrane-fusion protein of T1SS C1O47_05330 PF00873 AcrB/AcrD/AcrF family C1O47_05335 PF03797 Autotransporter beta-domain C1O47_05335 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1O47_05335 PF07548 Chlamydia polymorphic membrane protein middle domain C1O47_05365 PF01751 Toprim domain C1O47_05365 PF01131 DNA topoisomerase C1O47_05385 PF01476 LysM domain C1O47_05385 PF01510 N-acetylmuramoyl-L-alanine amidase C1O47_05385 PF01471 Putative peptidoglycan binding domain C1O47_05390 PF00694 Aconitase C-terminal domain C1O47_05390 PF00330 Aconitase family (aconitate hydratase) C1O47_05405 PF01641 SelR domain C1O47_05405 PF01625 Peptide methionine sulfoxide reductase C1O47_05420 PF01139 tRNA-splicing ligase RtcB C1O47_05430 PF07690 Major Facilitator Superfamily C1O47_05440 PF01923 Cobalamin adenosyltransferase C1O47_05450 PF17876 Cold shock domain C1O47_05450 PF00575 S1 RNA binding domain C1O47_05450 PF08206 Ribonuclease B OB domain C1O47_05450 PF00773 RNB domain C1O47_05475 PF12392 Collagenase C1O47_05475 PF01136 Peptidase family U32 C1O47_05480 PF08245 Mur ligase middle domain C1O47_05480 PF02875 Mur ligase family, glutamate ligase domain C1O47_05495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O47_05500 PF12419 SNF2 Helicase protein C1O47_05500 PF00176 SNF2 family N-terminal domain C1O47_05500 PF00271 Helicase conserved C-terminal domain C1O47_05505 PF00176 SNF2 family N-terminal domain C1O47_05505 PF00271 Helicase conserved C-terminal domain C1O47_05505 PF12419 SNF2 Helicase protein C1O47_05520 PF02872 5'-nucleotidase, C-terminal domain C1O47_05520 PF00149 Calcineurin-like phosphoesterase C1O47_05525 PF03330 Lytic transglycolase C1O47_05525 PF05036 Sporulation related domain C1O47_05530 PF01513 ATP-NAD kinase C1O47_05535 PF00467 KOW motif C1O47_05535 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1O47_05540 PF00281 Ribosomal protein L5 C1O47_05540 PF00673 ribosomal L5P family C-terminus C1O47_05545 PF00410 Ribosomal protein S8 C1O47_05550 PF00347 Ribosomal protein L6 C1O47_05555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1O47_05560 PF03719 Ribosomal protein S5, C-terminal domain C1O47_05560 PF00333 Ribosomal protein S5, N-terminal domain C1O47_05565 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1O47_05570 PF00344 SecY translocase C1O47_05575 PF05191 Adenylate kinase, active site lid C1O47_05580 PF00557 Metallopeptidase family M24 C1O47_05595 PF02503 Polyphosphate kinase middle domain C1O47_05595 PF13090 Polyphosphate kinase C-terminal domain 2 C1O47_05595 PF17941 Polyphosphate kinase C-terminal domain 1 C1O47_05595 PF13089 Polyphosphate kinase N-terminal domain C1O47_05605 PF01501 Glycosyl transferase family 8 C1O47_05615 PF00535 Glycosyl transferase family 2 C1O47_05620 PF01531 Glycosyl transferase family 11 C1O47_05625 PF00535 Glycosyl transferase family 2 C1O47_05640 PF00535 Glycosyl transferase family 2 C1O47_05645 PF01965 DJ-1/PfpI family C1O47_05655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O47_05655 PF00364 Biotin-requiring enzyme C1O47_05655 PF02817 e3 binding domain C1O47_05660 PF01979 Amidohydrolase family C1O47_05680 PF02554 Carbon starvation protein CstA C1O47_05700 PF00884 Sulfatase C1O47_05705 PF02033 Ribosome-binding factor A C1O47_05710 PF00009 Elongation factor Tu GTP binding domain C1O47_05710 PF11987 Translation-initiation factor 2 C1O47_05710 PF04760 Translation initiation factor IF-2, N-terminal region C1O47_05715 PF13184 NusA-like KH domain C1O47_05715 PF00575 S1 RNA binding domain C1O47_05715 PF08529 NusA N-terminal domain C1O47_05720 PF03372 Endonuclease/Exonuclease/phosphatase family C1O47_05725 PF01725 Ham1 family C1O47_05730 PF06962 Putative rRNA methylase C1O47_05735 PF04015 Domain of unknown function (DUF362) C1O47_05750 PF00498 FHA domain C1O47_05750 PF00005 ABC transporter C1O47_05750 PF01061 ABC-2 type transporter C1O47_05775 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C1O47_05780 PF02397 Bacterial sugar transferase C1O47_05785 PF02397 Bacterial sugar transferase C1O47_05790 PF00288 GHMP kinases N terminal domain C1O47_05790 PF10509 Galactokinase galactose-binding signature C1O47_05790 PF08544 GHMP kinases C terminal C1O47_05795 PF00474 Sodium:solute symporter family C1O47_05800 PF00580 UvrD/REP helicase N-terminal domain C1O47_05800 PF13361 UvrD-like helicase C-terminal domain C1O47_05805 PF00551 Formyl transferase C1O47_05805 PF02911 Formyl transferase, C-terminal domain C1O47_05815 PF03309 Type III pantothenate kinase C1O47_05820 PF00550 Phosphopantetheine attachment site C1O47_05835 PF02580 D-Tyr-tRNA(Tyr) deacylase C1O47_05845 PF13085 2Fe-2S iron-sulfur cluster binding domain C1O47_05920 PF12848 ABC transporter C1O47_05920 PF00005 ABC transporter C1O47_05920 PF16326 ABC transporter C-terminal domain C1O47_05930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1O47_05930 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C1O47_05940 PF00571 CBS domain C1O47_05940 PF03471 Transporter associated domain C1O47_05940 PF01595 Cyclin M transmembrane N-terminal domain C1O47_05955 PF12146 Serine aminopeptidase, S33 C1O47_05965 PF00248 Aldo/keto reductase family C1O47_05975 PF17137 Domain of unknown function (DUF5110) C1O47_05975 PF01055 Glycosyl hydrolases family 31 C1O47_05975 PF13802 Galactose mutarotase-like C1O47_05975 PF16338 Domain of unknown function (DUF4968) C1O47_05985 PF04397 LytTr DNA-binding domain C1O47_05985 PF00072 Response regulator receiver domain C1O47_06020 PF00561 alpha/beta hydrolase fold C1O47_06025 PF01914 MarC family integral membrane protein C1O47_06055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1O47_06060 PF12848 ABC transporter C1O47_06060 PF16326 ABC transporter C-terminal domain C1O47_06060 PF00005 ABC transporter C1O47_06105 PF01555 DNA methylase C1O47_06130 PF01406 tRNA synthetases class I (C) catalytic domain C1O47_06130 PF09190 DALR domain C1O47_06135 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_06135 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_06140 PF16347 Domain of unknown function (DUF4976) C1O47_06140 PF00884 Sulfatase C1O47_06155 PF06421 GTP-binding protein LepA C-terminus C1O47_06155 PF00679 Elongation factor G C-terminus C1O47_06155 PF00009 Elongation factor Tu GTP binding domain C1O47_06155 PF03144 Elongation factor Tu domain 2 C1O47_06180 PF00623 RNA polymerase Rpb1, domain 2 C1O47_06180 PF04998 RNA polymerase Rpb1, domain 5 C1O47_06180 PF04983 RNA polymerase Rpb1, domain 3 C1O47_06180 PF04997 RNA polymerase Rpb1, domain 1 C1O47_06180 PF05000 RNA polymerase Rpb1, domain 4 C1O47_06185 PF10385 RNA polymerase beta subunit external 1 domain C1O47_06185 PF04563 RNA polymerase beta subunit C1O47_06185 PF04565 RNA polymerase Rpb2, domain 3 C1O47_06185 PF00562 RNA polymerase Rpb2, domain 6 C1O47_06185 PF04560 RNA polymerase Rpb2, domain 7 C1O47_06185 PF04561 RNA polymerase Rpb2, domain 2 C1O47_06190 PF00542 Ribosomal protein L7/L12 C-terminal domain C1O47_06190 PF16320 Ribosomal protein L7/L12 dimerisation domain C1O47_06195 PF00466 Ribosomal protein L10 C1O47_06200 PF00687 Ribosomal protein L1p/L10e family C1O47_06205 PF03946 Ribosomal protein L11, N-terminal domain C1O47_06205 PF00298 Ribosomal protein L11, RNA binding domain C1O47_06210 PF02357 Transcription termination factor nusG C1O47_06210 PF00467 KOW motif C1O47_06225 PF03144 Elongation factor Tu domain 2 C1O47_06225 PF00009 Elongation factor Tu GTP binding domain C1O47_06225 PF03143 Elongation factor Tu C-terminal domain C1O47_06235 PF00814 Glycoprotease family C1O47_06240 PF07724 AAA domain (Cdc48 subfamily) C1O47_06240 PF10431 C-terminal, D2-small domain, of ClpB protein C1O47_06240 PF06689 ClpX C4-type zinc finger C1O47_06245 PF00574 Clp protease C1O47_06250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1O47_06250 PF05697 Bacterial trigger factor protein (TF) C1O47_06250 PF05698 Bacterial trigger factor protein (TF) C-terminus C1O47_06255 PF07244 Surface antigen variable number repeat C1O47_06255 PF01103 Surface antigen C1O47_06265 PF02219 Methylenetetrahydrofolate reductase C1O47_06285 PF00873 AcrB/AcrD/AcrF family C1O47_06330 PF13649 Methyltransferase domain C1O47_06335 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1O47_06335 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1O47_06335 PF02772 S-adenosylmethionine synthetase, central domain C1O47_06340 PF05221 S-adenosyl-L-homocysteine hydrolase C1O47_06340 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1O47_06355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1O47_06365 PF00884 Sulfatase C1O47_06365 PF16347 Domain of unknown function (DUF4976) C1O47_06370 PF16124 RecQ zinc-binding C1O47_06370 PF00271 Helicase conserved C-terminal domain C1O47_06370 PF00270 DEAD/DEAH box helicase C1O47_06370 PF00570 HRDC domain C1O47_06370 PF09382 RQC domain C1O47_06395 PF02910 Fumarate reductase flavoprotein C-term C1O47_06395 PF00890 FAD binding domain C1O47_06400 PF00588 SpoU rRNA Methylase family C1O47_06400 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1O47_06450 PF17910 FeoB cytosolic helical domain C1O47_06450 PF02421 Ferrous iron transport protein B C1O47_06450 PF07670 Nucleoside recognition C1O47_06450 PF07664 Ferrous iron transport protein B C terminus C1O47_06465 PF03150 Di-haem cytochrome c peroxidase C1O47_06465 PF00034 Cytochrome c C1O47_06465 PF14376 Haem-binding domain C1O47_06470 PF04055 Radical SAM superfamily C1O47_06470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1O47_06475 PF14437 MafB19-like deaminase C1O47_06480 PF00480 ROK family C1O47_06485 PF00403 Heavy-metal-associated domain C1O47_06490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O47_06490 PF07498 Rho termination factor, N-terminal domain C1O47_06490 PF07497 Rho termination factor, RNA-binding domain C1O47_06495 PF03958 Bacterial type II/III secretion system short domain C1O47_06495 PF00263 Bacterial type II and III secretion system protein C1O47_06520 PF05343 M42 glutamyl aminopeptidase C1O47_06525 PF01790 Prolipoprotein diacylglyceryl transferase C1O47_06535 PF00557 Metallopeptidase family M24 C1O47_06535 PF05195 Aminopeptidase P, N-terminal domain C1O47_06540 PF08029 HisG, C-terminal domain C1O47_06540 PF01634 ATP phosphoribosyltransferase C1O47_06560 PF00989 PAS fold C1O47_06560 PF00512 His Kinase A (phospho-acceptor) domain C1O47_06560 PF11808 Phosphate regulon sensor protein PhoR C1O47_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_06565 PF00486 Transcriptional regulatory protein, C terminal C1O47_06565 PF00072 Response regulator receiver domain C1O47_06570 PF00920 Dehydratase family C1O47_06655 PF00884 Sulfatase C1O47_06690 PF01370 NAD dependent epimerase/dehydratase family C1O47_06695 PF00398 Ribosomal RNA adenine dimethylase C1O47_06715 PF01554 MatE C1O47_06720 PF02386 Cation transport protein C1O47_06735 PF13539 D-alanyl-D-alanine carboxypeptidase C1O47_06860 PF03814 Potassium-transporting ATPase A subunit C1O47_06870 PF02669 K+-transporting ATPase, c chain C1O47_06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_06875 PF00512 His Kinase A (phospho-acceptor) domain C1O47_06875 PF02702 Osmosensitive K+ channel His kinase sensor domain C1O47_06875 PF13493 Domain of unknown function (DUF4118) C1O47_06875 PF13492 GAF domain C1O47_06885 PF12867 DinB superfamily C1O47_06885 PF03781 Sulfatase-modifying factor enzyme 1 C1O47_06895 PF00753 Metallo-beta-lactamase superfamily C1O47_06895 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1O47_06905 PF03793 PASTA domain C1O47_06905 PF00069 Protein kinase domain C1O47_06910 PF00248 Aldo/keto reductase family C1O47_06915 PF13411 MerR HTH family regulatory protein C1O47_06925 PF01212 Beta-eliminating lyase C1O47_06955 PF00005 ABC transporter C1O47_06965 PF17863 AAA lid domain C1O47_06965 PF07726 ATPase family associated with various cellular activities (AAA) C1O47_06970 PF04235 Protein of unknown function (DUF418) C1O47_06990 PF01370 NAD dependent epimerase/dehydratase family C1O47_06990 PF08338 Domain of unknown function (DUF1731) C1O47_07005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1O47_07005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1O47_07010 PF00005 ABC transporter C1O47_07015 PF07729 FCD domain C1O47_07015 PF00392 Bacterial regulatory proteins, gntR family C1O47_07030 PF00884 Sulfatase C1O47_07040 PF00113 Enolase, C-terminal TIM barrel domain C1O47_07040 PF03952 Enolase, N-terminal domain C1O47_07050 PF00155 Aminotransferase class I and II C1O47_07055 PF02424 ApbE family C1O47_07070 PF00830 Ribosomal L28 family C1O47_07085 PF03652 Holliday junction resolvase C1O47_07090 PF00483 Nucleotidyl transferase C1O47_07090 PF01050 Mannose-6-phosphate isomerase C1O47_07095 PF01255 Putative undecaprenyl diphosphate synthase C1O47_07100 PF00986 DNA gyrase B subunit, carboxyl terminus C1O47_07100 PF00204 DNA gyrase B C1O47_07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_07100 PF01751 Toprim domain C1O47_07105 PF08544 GHMP kinases C terminal C1O47_07105 PF00288 GHMP kinases N terminal domain C1O47_07115 PF13307 Helicase C-terminal domain C1O47_07115 PF06733 DEAD_2 C1O47_07120 PF00005 ABC transporter C1O47_07145 PF00696 Amino acid kinase family C1O47_07150 PF01544 CorA-like Mg2+ transporter protein C1O47_07155 PF03948 Ribosomal protein L9, C-terminal domain C1O47_07155 PF01281 Ribosomal protein L9, N-terminal domain C1O47_07160 PF02142 MGS-like domain C1O47_07160 PF01808 AICARFT/IMPCHase bienzyme C1O47_07165 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1O47_07170 PF01648 4'-phosphopantetheinyl transferase superfamily C1O47_07180 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C1O47_07180 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C1O47_07185 PF01471 Putative peptidoglycan binding domain C1O47_07185 PF01476 LysM domain C1O47_07185 PF01510 N-acetylmuramoyl-L-alanine amidase C1O47_07190 PF00271 Helicase conserved C-terminal domain C1O47_07190 PF00270 DEAD/DEAH box helicase C1O47_07190 PF17191 RecG wedge domain C1O47_07195 PF00271 Helicase conserved C-terminal domain C1O47_07195 PF17191 RecG wedge domain C1O47_07195 PF00270 DEAD/DEAH box helicase C1O47_07205 PF13247 4Fe-4S dicluster domain C1O47_07205 PF00037 4Fe-4S binding domain C1O47_07215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O47_07225 PF01761 3-dehydroquinate synthase C1O47_07280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1O47_07290 PF01368 DHH family C1O47_07290 PF00571 CBS domain C1O47_07290 PF07085 DRTGG domain C1O47_07290 PF02833 DHHA2 domain C1O47_07300 PF02575 YbaB/EbfC DNA-binding family C1O47_07305 PF12169 DNA polymerase III subunits gamma and tau domain III C1O47_07325 PF04002 RadC-like JAB domain C1O47_07330 PF01256 Carbohydrate kinase C1O47_07330 PF03853 YjeF-related protein N-terminus C1O47_07335 PF01176 Translation initiation factor 1A / IF-1 C1O47_07340 PF00572 Ribosomal protein L13 C1O47_07345 PF00380 Ribosomal protein S9/S16 C1O47_07350 PF02590 Predicted SPOUT methyltransferase C1O47_07360 PF01618 MotA/TolQ/ExbB proton channel family C1O47_07365 PF02472 Biopolymer transport protein ExbD/TolR C1O47_07375 PF00912 Transglycosylase C1O47_07375 PF17092 Penicillin-binding protein OB-like domain C1O47_07375 PF00905 Penicillin binding protein transpeptidase domain C1O47_07380 PF00459 Inositol monophosphatase family C1O47_07385 PF02542 YgbB family C1O47_07395 PF01238 Phosphomannose isomerase type I C1O47_07405 PF03553 Na+/H+ antiporter family C1O47_07410 PF01370 NAD dependent epimerase/dehydratase family C1O47_07415 PF16363 GDP-mannose 4,6 dehydratase C1O47_07420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1O47_07420 PF00117 Glutamine amidotransferase class-I C1O47_07425 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1O47_07425 PF02142 MGS-like domain C1O47_07425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O47_07430 PF00120 Glutamine synthetase, catalytic domain C1O47_07430 PF12437 Glutamine synthetase type III N terminal C1O47_07430 PF18318 Glutamine synthetase C-terminal domain C1O47_07435 PF04898 Glutamate synthase central domain C1O47_07435 PF00310 Glutamine amidotransferases class-II C1O47_07435 PF01645 Conserved region in glutamate synthase C1O47_07435 PF01493 GXGXG motif C1O47_07440 PF14849 YidC periplasmic domain C1O47_07440 PF02096 60Kd inner membrane protein C1O47_07445 PF01809 Putative membrane protein insertion efficiency factor C1O47_07450 PF00825 Ribonuclease P C1O47_07455 PF00468 Ribosomal protein L34 C1O47_07460 PF18318 Glutamine synthetase C-terminal domain C1O47_07460 PF12437 Glutamine synthetase type III N terminal C1O47_07460 PF00120 Glutamine synthetase, catalytic domain C1O47_07475 PF13472 GDSL-like Lipase/Acylhydrolase family C1O47_07475 PF07859 alpha/beta hydrolase fold C1O47_07485 PF01263 Aldose 1-epimerase C1O47_07495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1O47_07495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1O47_07500 PF00348 Polyprenyl synthetase C1O47_07505 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1O47_07505 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O47_07520 PF03313 Serine dehydratase alpha chain C1O47_07520 PF03315 Serine dehydratase beta chain C1O47_07525 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O47_07525 PF00085 Thioredoxin C1O47_07575 PF02254 TrkA-N domain C1O47_07575 PF00999 Sodium/hydrogen exchanger family C1O47_07580 PF00149 Calcineurin-like phosphoesterase C1O47_07585 PF02073 Thermophilic metalloprotease (M29) C1O47_07590 PF00551 Formyl transferase C1O47_07595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1O47_07595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1O47_07615 PF01751 Toprim domain C1O47_07615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_07615 PF00204 DNA gyrase B C1O47_07615 PF00986 DNA gyrase B subunit, carboxyl terminus C1O47_07620 PF03989 DNA gyrase C-terminal domain, beta-propeller C1O47_07620 PF00521 DNA gyrase/topoisomerase IV, subunit A C1O47_07630 PF01136 Peptidase family U32 C1O47_07635 PF03781 Sulfatase-modifying factor enzyme 1 C1O47_07655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1O47_07655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1O47_07660 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_07665 PF00005 ABC transporter C1O47_07675 PF00009 Elongation factor Tu GTP binding domain C1O47_07680 PF01507 Phosphoadenosine phosphosulfate reductase family C1O47_07685 PF01507 Phosphoadenosine phosphosulfate reductase family C1O47_07690 PF00291 Pyridoxal-phosphate dependent enzyme C1O47_07700 PF01895 PhoU domain C1O47_07705 PF00005 ABC transporter C1O47_07710 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_07715 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_07720 PF12849 PBP superfamily domain C1O47_07725 PF00005 ABC transporter C1O47_07735 PF01263 Aldose 1-epimerase C1O47_07750 PF00675 Insulinase (Peptidase family M16) C1O47_07750 PF05193 Peptidase M16 inactive domain C1O47_07765 PF00132 Bacterial transferase hexapeptide (six repeats) C1O47_07765 PF14602 Hexapeptide repeat of succinyl-transferase C1O47_07765 PF12464 Maltose acetyltransferase C1O47_07800 PF01765 Ribosome recycling factor C1O47_07805 PF00696 Amino acid kinase family C1O47_07810 PF05552 Conserved TM helix C1O47_07810 PF00924 Mechanosensitive ion channel C1O47_07815 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1O47_07815 PF00578 AhpC/TSA family C1O47_07820 PF00209 Sodium:neurotransmitter symporter family C1O47_07845 PF02801 Beta-ketoacyl synthase, C-terminal domain C1O47_07845 PF00109 Beta-ketoacyl synthase, N-terminal domain C1O47_07850 PF01641 SelR domain C1O47_07855 PF11799 impB/mucB/samB family C-terminal domain C1O47_07855 PF00817 impB/mucB/samB family C1O47_07890 PF00005 ABC transporter C1O47_07895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O47_07900 PF02272 DHHA1 domain C1O47_07900 PF01411 tRNA synthetases class II (A) C1O47_07900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1O47_07905 PF01066 CDP-alcohol phosphatidyltransferase C1O47_07915 PF00809 Pterin binding enzyme C1O47_07925 PF04551 GcpE protein C1O47_07945 PF02801 Beta-ketoacyl synthase, C-terminal domain C1O47_07945 PF00109 Beta-ketoacyl synthase, N-terminal domain C1O47_07950 PF00155 Aminotransferase class I and II C1O47_07975 PF02938 GAD domain C1O47_07975 PF00152 tRNA synthetases class II (D, K and N) C1O47_07975 PF01336 OB-fold nucleic acid binding domain C1O47_07980 PF13393 Histidyl-tRNA synthetase C1O47_07980 PF03129 Anticodon binding domain C1O47_07990 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1O47_07995 PF01300 Telomere recombination C1O47_07995 PF07503 HypF finger C1O47_07995 PF17788 HypF Kae1-like domain C1O47_07995 PF00708 Acylphosphatase C1O47_08000 PF01455 HupF/HypC family C1O47_08005 PF01924 Hydrogenase formation hypA family C1O47_08010 PF00586 AIR synthase related protein, N-terminal domain C1O47_08010 PF02769 AIR synthase related protein, C-terminal domain C1O47_08030 PF00012 Hsp70 protein C1O47_08035 PF00166 Chaperonin 10 Kd subunit C1O47_08040 PF00118 TCP-1/cpn60 chaperonin family C1O47_08075 PF02706 Chain length determinant protein C1O47_08075 PF13614 AAA domain C1O47_08075 PF13807 G-rich domain on putative tyrosine kinase C1O47_08090 PF01330 RuvA N terminal domain C1O47_08090 PF07499 RuvA, C-terminal domain C1O47_08095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1O47_08095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1O47_08100 PF00162 Phosphoglycerate kinase C1O47_08110 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation C1O47_08110 PF14508 Glycosyl-hydrolase 97 N-terminal C1O47_08110 PF10566 Glycoside hydrolase 97 C1O47_08120 PF01555 DNA methylase C1O47_08130 PF03461 TRCF domain C1O47_08130 PF17757 UvrB interaction domain C1O47_08130 PF02559 CarD-like/TRCF domain C1O47_08130 PF00270 DEAD/DEAH box helicase C1O47_08130 PF00271 Helicase conserved C-terminal domain C1O47_08140 PF07690 Major Facilitator Superfamily C1O47_08155 PF02811 PHP domain C1O47_08160 PF01515 Phosphate acetyl/butaryl transferase C1O47_08160 PF07085 DRTGG domain C1O47_08165 PF01171 PP-loop family C1O47_08165 PF11734 TilS substrate C-terminal domain C1O47_08170 PF01197 Ribosomal protein L31 C1O47_08205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1O47_08205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1O47_08205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1O47_08210 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1O47_08210 PF00056 lactate/malate dehydrogenase, NAD binding domain C1O47_08235 PF00881 Nitroreductase family C1O47_08240 PF01479 S4 domain C1O47_08240 PF00849 RNA pseudouridylate synthase C1O47_08245 PF00849 RNA pseudouridylate synthase C1O47_08245 PF01479 S4 domain C1O47_08265 PF00005 ABC transporter C1O47_08270 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_08280 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O47_08280 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1O47_08285 PF01960 ArgJ family C1O47_08305 PF17760 UvrA interaction domain C1O47_08305 PF17755 UvrA DNA-binding domain C1O47_08335 PF02594 Uncharacterised ACR, YggU family COG1872 C1O47_08340 PF01025 GrpE C1O47_08345 PF00684 DnaJ central domain C1O47_08345 PF01556 DnaJ C terminal domain C1O47_08345 PF00226 DnaJ domain C1O47_08350 PF04452 RNA methyltransferase C1O47_08360 PF13229 Right handed beta helix region C1O47_08370 PF10502 Signal peptidase, peptidase S26 C1O47_08375 PF01565 FAD binding domain C1O47_08375 PF02913 FAD linked oxidases, C-terminal domain C1O47_08400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1O47_08400 PF14572 Phosphoribosyl synthetase-associated domain C1O47_08405 PF01386 Ribosomal L25p family C1O47_08405 PF14693 Ribosomal protein TL5, C-terminal domain C1O47_08415 PF00475 Imidazoleglycerol-phosphate dehydratase C1O47_08420 PF00117 Glutamine amidotransferase class-I C1O47_08425 PF01250 Ribosomal protein S6 C1O47_08430 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C1O47_08445 PF00768 D-alanyl-D-alanine carboxypeptidase C1O47_08445 PF07943 Penicillin-binding protein 5, C-terminal domain C1O47_08450 PF00365 Phosphofructokinase C1O47_08460 PF02535 ZIP Zinc transporter C1O47_08475 PF00155 Aminotransferase class I and II C1O47_08480 PF03755 YicC-like family, N-terminal region C1O47_08480 PF08340 Domain of unknown function (DUF1732) C1O47_08485 PF00625 Guanylate kinase C1O47_08490 PF03600 Citrate transporter C1O47_08490 PF02080 TrkA-C domain C1O47_08495 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O47_08510 PF01040 UbiA prenyltransferase family C1O47_08545 PF01522 Polysaccharide deacetylase C1O47_08545 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain C1O47_08550 PF07549 SecD/SecF GG Motif C1O47_08550 PF02355 Protein export membrane protein C1O47_08565 PF06750 Bacterial Peptidase A24 N-terminal domain C1O47_08565 PF01478 Type IV leader peptidase family C1O47_08575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1O47_08575 PF01000 RNA polymerase Rpb3/RpoA insert domain C1O47_08575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1O47_08580 PF01196 Ribosomal protein L17 C1O47_08585 PF00698 Acyl transferase domain C1O47_08600 PF13419 Haloacid dehalogenase-like hydrolase C1O47_08615 PF00691 OmpA family C1O47_08675 PF00248 Aldo/keto reductase family C1O47_08680 PF03030 Inorganic H+ pyrophosphatase C1O47_08695 PF00425 chorismate binding enzyme C1O47_08695 PF04715 Anthranilate synthase component I, N terminal region C1O47_08700 PF00591 Glycosyl transferase family, a/b domain C1O47_08700 PF02885 Glycosyl transferase family, helical bundle domain C1O47_08705 PF00218 Indole-3-glycerol phosphate synthase C1O47_08710 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1O47_08715 PF00291 Pyridoxal-phosphate dependent enzyme C1O47_08720 PF00290 Tryptophan synthase alpha chain C1O47_08730 PF12951 Passenger-associated-transport-repeat C1O47_08740 PF00561 alpha/beta hydrolase fold C1O47_08745 PF00444 Ribosomal protein L36 C1O47_08755 PF04055 Radical SAM superfamily C1O47_08760 PF01228 Glycine radical C1O47_08760 PF02901 Pyruvate formate lyase-like C1O47_08795 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1O47_08800 PF07690 Major Facilitator Superfamily C1O47_08815 PF02151 UvrB/uvrC motif C1O47_08815 PF12344 Ultra-violet resistance protein B C1O47_08815 PF17757 UvrB interaction domain C1O47_08815 PF00271 Helicase conserved C-terminal domain C1O47_08815 PF04851 Type III restriction enzyme, res subunit C1O47_08820 PF01632 Ribosomal protein L35 C1O47_08825 PF00453 Ribosomal protein L20 C1O47_08830 PF02163 Peptidase family M50 C1O47_08830 PF17820 PDZ domain C1O47_08845 PF13361 UvrD-like helicase C-terminal domain C1O47_08845 PF12705 PD-(D/E)XK nuclease superfamily C1O47_08845 PF00580 UvrD/REP helicase N-terminal domain C1O47_08855 PF00892 EamA-like transporter family C1O47_08860 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C1O47_08860 PF00207 Alpha-2-macroglobulin family C1O47_08860 PF01835 MG2 domain C1O47_08860 PF07703 Alpha-2-macroglobulin bait region domain C1O47_08860 PF07678 A-macroglobulin TED domain C1O47_08865 PF00465 Iron-containing alcohol dehydrogenase C1O47_08875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1O47_08875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1O47_08900 PF00285 Citrate synthase, C-terminal domain C1O47_08910 PF00588 SpoU rRNA Methylase family C1O47_08920 PF01668 SmpB protein C1O47_08930 PF00849 RNA pseudouridylate synthase C1O47_08940 PF00334 Nucleoside diphosphate kinase C1O47_08945 PF00535 Glycosyl transferase family 2 C1O47_08950 PF00535 Glycosyl transferase family 2 C1O47_08960 PF00482 Type II secretion system (T2SS), protein F C1O47_08965 PF00437 Type II/IV secretion system protein C1O47_08970 PF00437 Type II/IV secretion system protein C1O47_08975 PF01207 Dihydrouridine synthase (Dus) C1O47_08985 PF00155 Aminotransferase class I and II C1O47_08990 PF03023 Lipid II flippase MurJ C1O47_08995 PF00294 pfkB family carbohydrate kinase C1O47_08995 PF01467 Cytidylyltransferase-like C1O47_09000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1O47_09000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1O47_09005 PF02638 Glycosyl hydrolase-like 10 C1O47_09010 PF00731 AIR carboxylase C1O47_09015 PF02540 NAD synthase C1O47_09020 PF01969 Protein of unknown function DUF111 C1O47_09025 PF00348 Polyprenyl synthetase C1O47_09030 PF00854 POT family C1O47_09040 PF01883 Iron-sulfur cluster assembly protein C1O47_09055 PF00361 Proton-conducting membrane transporter C1O47_09060 PF00361 Proton-conducting membrane transporter C1O47_09065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1O47_09065 PF00361 Proton-conducting membrane transporter C1O47_09070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1O47_09075 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C1O47_09085 PF00146 NADH dehydrogenase C1O47_09090 PF00384 Molybdopterin oxidoreductase C1O47_09090 PF01568 Molydopterin dinucleotide binding domain C1O47_09090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C1O47_09090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1O47_09095 PF10531 SLBB domain C1O47_09095 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1O47_09095 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1O47_09105 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C1O47_09120 PF01522 Polysaccharide deacetylase C1O47_09130 PF00677 Lumazine binding domain C1O47_09155 PF03797 Autotransporter beta-domain C1O47_09155 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1O47_09155 PF07548 Chlamydia polymorphic membrane protein middle domain C1O47_09160 PF02446 4-alpha-glucanotransferase C1O47_09170 PF04055 Radical SAM superfamily C1O47_09170 PF18693 TRAM domain C1O47_09170 PF00919 Uncharacterized protein family UPF0004 C1O47_09175 PF01972 Serine dehydrogenase proteinase C1O47_09175 PF01957 NfeD-like C-terminal, partner-binding C1O47_09180 PF08275 DNA primase catalytic core, N-terminal domain C1O47_09180 PF10410 DnaB-helicase binding domain of primase C1O47_09180 PF01807 CHC2 zinc finger C1O47_09185 PF04539 Sigma-70 region 3 C1O47_09185 PF04542 Sigma-70 region 2 C1O47_09185 PF04545 Sigma-70, region 4 C1O47_09185 PF03979 Sigma-70 factor, region 1.1 C1O47_09185 PF00140 Sigma-70 factor, region 1.2 C1O47_09190 PF01427 D-ala-D-ala dipeptidase C1O47_09205 PF00464 Serine hydroxymethyltransferase C1O47_09210 PF17804 Tail specific protease N-terminal domain C1O47_09210 PF03572 Peptidase family S41 C1O47_09210 PF11818 C-terminal domain of tail specific protease (DUF3340) C1O47_09210 PF00595 PDZ domain C1O47_09225 PF08482 ATP-dependent helicase C-terminal C1O47_09225 PF00271 Helicase conserved C-terminal domain C1O47_09225 PF00270 DEAD/DEAH box helicase C1O47_09225 PF04408 Helicase associated domain (HA2) C1O47_09240 PF13735 tRNA nucleotidyltransferase domain 2 putative C1O47_09240 PF12627 Probable RNA and SrmB- binding site of polymerase A C1O47_09240 PF01743 Poly A polymerase head domain C1O47_09250 PF03958 Bacterial type II/III secretion system short domain C1O47_09250 PF00263 Bacterial type II and III secretion system protein C1O47_09265 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1O47_09265 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1O47_09285 PF01207 Dihydrouridine synthase (Dus) C1O47_09290 PF02401 LytB protein C1O47_09300 PF01649 Ribosomal protein S20 C1O47_09305 PF13419 Haloacid dehalogenase-like hydrolase C1O47_09310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O47_09310 PF00205 Thiamine pyrophosphate enzyme, central domain C1O47_09310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1O47_09320 PF02666 Phosphatidylserine decarboxylase C1O47_09325 PF00834 Ribulose-phosphate 3 epimerase family C1O47_09330 PF00133 tRNA synthetases class I (I, L, M and V) C1O47_09330 PF09334 tRNA synthetases class I (M) C1O47_09330 PF08264 Anticodon-binding domain of tRNA C1O47_09330 PF13603 Leucyl-tRNA synthetase, Domain 2 C1O47_09335 PF00884 Sulfatase C1O47_09345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1O47_09350 PF17810 Arginine decarboxylase helical bundle domain C1O47_09350 PF17944 Arginine decarboxylase C-terminal helical extension C1O47_09350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1O47_09365 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O47_09365 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O47_09365 PF02929 Beta galactosidase small chain C1O47_09365 PF16353 Domain of unknown function(DUF4981) C1O47_09365 PF00703 Glycosyl hydrolases family 2 C1O47_09370 PF00703 Glycosyl hydrolases family 2 C1O47_09370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O47_09370 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O47_09375 PF16193 AAA C-terminal domain C1O47_09375 PF12002 MgsA AAA+ ATPase C terminal C1O47_09375 PF00004 ATPase family associated with various cellular activities (AAA) C1O47_09380 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_09380 PF07691 PA14 domain C1O47_09380 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_09400 PF00365 Phosphofructokinase C1O47_09415 PF13186 Iron-sulfur cluster-binding domain C1O47_09415 PF04055 Radical SAM superfamily C1O47_09415 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C1O47_09450 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C1O47_09465 PF02277 Phosphoribosyltransferase C1O47_09470 PF03186 CobD/Cbib protein C1O47_09475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1O47_09475 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1O47_09475 PF00155 Aminotransferase class I and II C1O47_09485 PF07715 TonB-dependent Receptor Plug Domain C1O47_09485 PF00593 TonB dependent receptor C1O47_09495 PF01301 Glycosyl hydrolases family 35 C1O47_09505 PF01979 Amidohydrolase family C1O47_09510 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O47_09510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1O47_09520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O47_09520 PF00364 Biotin-requiring enzyme C1O47_09520 PF02817 e3 binding domain C1O47_09525 PF02779 Transketolase, pyrimidine binding domain C1O47_09525 PF00676 Dehydrogenase E1 component C1O47_09525 PF16078 2-oxoglutarate dehydrogenase N-terminus C1O47_09525 PF16870 2-oxoglutarate dehydrogenase C-terminal C1O47_09530 PF02322 Cytochrome bd terminal oxidase subunit II C1O47_09535 PF01654 Cytochrome bd terminal oxidase subunit I C1O47_09545 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1O47_09555 PF00291 Pyridoxal-phosphate dependent enzyme C1O47_09560 PF01047 MarR family C1O47_09575 PF00210 Ferritin-like domain C1O47_09595 PF02698 DUF218 domain C1O47_09625 PF00270 DEAD/DEAH box helicase C1O47_09625 PF09382 RQC domain C1O47_09625 PF16124 RecQ zinc-binding C1O47_09625 PF00271 Helicase conserved C-terminal domain C1O47_09625 PF00570 HRDC domain C1O47_09640 PF02629 CoA binding domain C1O47_09640 PF00549 CoA-ligase C1O47_09645 PF08442 ATP-grasp domain C1O47_09645 PF00549 CoA-ligase C1O47_09685 PF02601 Exonuclease VII, large subunit C1O47_09685 PF13742 OB-fold nucleic acid binding domain C1O47_09690 PF01553 Acyltransferase C1O47_09690 PF00501 AMP-binding enzyme C1O47_09715 PF01370 NAD dependent epimerase/dehydratase family C1O47_09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_09720 PF00512 His Kinase A (phospho-acceptor) domain C1O47_09720 PF00672 HAMP domain C1O47_09725 PF00486 Transcriptional regulatory protein, C terminal C1O47_09725 PF00072 Response regulator receiver domain C1O47_09735 PF00490 Delta-aminolevulinic acid dehydratase C1O47_09750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1O47_09750 PF03129 Anticodon binding domain C1O47_09750 PF02824 TGS domain C1O47_09750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O47_09755 PF00707 Translation initiation factor IF-3, C-terminal domain C1O47_09755 PF05198 Translation initiation factor IF-3, N-terminal domain C1O47_09760 PF00271 Helicase conserved C-terminal domain C1O47_09760 PF04851 Type III restriction enzyme, res subunit C1O47_09760 PF08463 EcoEI R protein C-terminal C1O47_09760 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C1O47_09765 PF12161 HsdM N-terminal domain C1O47_09765 PF02384 N-6 DNA Methylase C1O47_09770 PF01420 Type I restriction modification DNA specificity domain C1O47_09775 PF00589 Phage integrase family C1O47_09775 PF02899 Phage integrase, N-terminal SAM-like domain C1O47_09785 PF01420 Type I restriction modification DNA specificity domain C1O47_09790 PF07786 Protein of unknown function (DUF1624) C1O47_09790 PF04235 Protein of unknown function (DUF418) C1O47_09795 PF13288 DXP reductoisomerase C-terminal domain C1O47_09795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1O47_09795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1O47_09800 PF01467 Cytidylyltransferase-like C1O47_09835 PF04991 LicD family C1O47_09840 PF01467 Cytidylyltransferase-like C1O47_09850 PF00155 Aminotransferase class I and II C1O47_09855 PF04991 LicD family C1O47_09860 PF02806 Alpha amylase, C-terminal all-beta domain C1O47_09860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1O47_09860 PF00128 Alpha amylase, catalytic domain C1O47_09870 PF02657 Fe-S metabolism associated domain C1O47_09875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1O47_09875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1O47_09880 PF00884 Sulfatase C1O47_09885 PF02896 PEP-utilising enzyme, TIM barrel domain C1O47_09885 PF00391 PEP-utilising enzyme, mobile domain C1O47_09885 PF05524 PEP-utilising enzyme, N-terminal C1O47_09890 PF00381 PTS HPr component phosphorylation site C1O47_09895 PF02603 HPr Serine kinase N terminus C1O47_09895 PF07475 HPr Serine kinase C-terminal domain C1O47_09900 PF01546 Peptidase family M20/M25/M40 C1O47_09900 PF07687 Peptidase dimerisation domain C1O47_09905 PF00005 ABC transporter C1O47_09920 PF01168 Alanine racemase, N-terminal domain C1O47_09945 PF04379 ApaG domain C1O47_09950 PF07728 AAA domain (dynein-related subfamily) C1O47_09950 PF07728 AAA domain (dynein-related subfamily) C1O47_09950 PF12102 Domain of unknown function (DUF3578) C1O47_09950 PF12102 Domain of unknown function (DUF3578) C1O47_09960 PF00176 SNF2 family N-terminal domain C1O47_09960 PF04434 SWIM zinc finger C1O47_09960 PF00271 Helicase conserved C-terminal domain C1O47_09965 PF01037 Lrp/AsnC ligand binding domain C1O47_09970 PF00155 Aminotransferase class I and II C1O47_09985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O47_09985 PF03129 Anticodon binding domain C1O47_10010 PF13519 von Willebrand factor type A domain C1O47_10030 PF07726 ATPase family associated with various cellular activities (AAA) C1O47_10030 PF17863 AAA lid domain C1O47_10035 PF01425 Amidase C1O47_10040 PF02686 Glu-tRNAGln amidotransferase C subunit C1O47_10080 PF13180 PDZ domain C1O47_10085 PF13180 PDZ domain C1O47_10095 PF01757 Acyltransferase family C1O47_10125 PF00155 Aminotransferase class I and II C1O47_10135 PF00248 Aldo/keto reductase family C1O47_10140 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1O47_10145 PF00248 Aldo/keto reductase family C1O47_10150 PF00149 Calcineurin-like phosphoesterase C1O47_10170 PF02525 Flavodoxin-like fold C1O47_10175 PF13411 MerR HTH family regulatory protein C1O47_10185 PF09154 Domain of unknown function (DUF1939) C1O47_10185 PF00128 Alpha amylase, catalytic domain C1O47_10195 PF01554 MatE C1O47_10205 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_10205 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_10220 PF04321 RmlD substrate binding domain C1O47_10225 PF17785 PUA-like domain C1O47_10225 PF10672 S-adenosylmethionine-dependent methyltransferase C1O47_10245 PF10672 S-adenosylmethionine-dependent methyltransferase C1O47_10245 PF17785 PUA-like domain C1O47_10250 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1O47_10250 PF02585 GlcNAc-PI de-N-acetylase C1O47_10265 PF01479 S4 domain C1O47_10265 PF01728 FtsJ-like methyltransferase C1O47_10275 PF02678 Pirin C1O47_10275 PF17954 Quercetinase C-terminal cupin domain C1O47_10290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1O47_10290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1O47_10300 PF02952 L-fucose isomerase, C-terminal domain C1O47_10300 PF07881 L-fucose isomerase, first N-terminal domain C1O47_10300 PF07882 L-fucose isomerase, second N-terminal domain C1O47_10305 PF07690 Major Facilitator Superfamily C1O47_10315 PF14873 N-terminal domain of BNR-repeat neuraminidase C1O47_10315 PF13859 BNR repeat-like domain C1O47_10320 PF04542 Sigma-70 region 2 C1O47_10320 PF08281 Sigma-70, region 4 C1O47_10335 PF02583 Metal-sensitive transcriptional repressor C1O47_10340 PF00403 Heavy-metal-associated domain C1O47_10365 PF13180 PDZ domain C1O47_10365 PF17820 PDZ domain C1O47_10370 PF13286 Phosphohydrolase-associated domain C1O47_10370 PF01966 HD domain C1O47_10375 PF00892 EamA-like transporter family C1O47_10390 PF00842 Alanine racemase, C-terminal domain C1O47_10390 PF01168 Alanine racemase, N-terminal domain C1O47_10395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O47_10395 PF00005 ABC transporter C1O47_10400 PF00005 ABC transporter C1O47_10400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O47_10405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1O47_10410 PF12911 N-terminal TM domain of oligopeptide transport permease C C1O47_10410 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_10420 PF00528 Binding-protein-dependent transport system inner membrane component C1O47_10435 PF02558 Ketopantoate reductase PanE/ApbA C1O47_10435 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1O47_10440 PF01268 Formate--tetrahydrofolate ligase C1O47_10445 PF06940 Domain of unknown function (DUF1287) C1O47_10450 PF02844 Phosphoribosylglycinamide synthetase, N domain C1O47_10450 PF02843 Phosphoribosylglycinamide synthetase, C domain C1O47_10450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1O47_10455 PF00436 Single-strand binding protein family C1O47_10465 PF01618 MotA/TolQ/ExbB proton channel family C1O47_10475 PF01327 Polypeptide deformylase C1O47_10485 PF00534 Glycosyl transferases group 1 C1O47_10485 PF13439 Glycosyltransferase Family 4 C1O47_10490 PF13802 Galactose mutarotase-like C1O47_10490 PF17137 Domain of unknown function (DUF5110) C1O47_10490 PF01055 Glycosyl hydrolases family 31 C1O47_10490 PF16338 Domain of unknown function (DUF4968) C1O47_10525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1O47_10535 PF01757 Acyltransferase family C1O47_10540 PF00180 Isocitrate/isopropylmalate dehydrogenase C1O47_10555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O47_10555 PF00753 Metallo-beta-lactamase superfamily C1O47_10555 PF10996 Beta-Casp domain C1O47_10560 PF02223 Thymidylate kinase C1O47_10565 PF06508 Queuosine biosynthesis protein QueC C1O47_10570 PF14489 QueF-like protein C1O47_10575 PF00924 Mechanosensitive ion channel C1O47_10580 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O47_10585 PF00902 Sec-independent protein translocase protein (TatC) C1O47_10590 PF02673 Bacitracin resistance protein BacA C1O47_10610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1O47_10620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1O47_10625 PF00216 Bacterial DNA-binding protein C1O47_10630 PF01264 Chorismate synthase C1O47_10640 PF00667 FAD binding domain C1O47_10640 PF00258 Flavodoxin C1O47_10640 PF00175 Oxidoreductase NAD-binding domain C1O47_10650 PF00149 Calcineurin-like phosphoesterase C1O47_10670 PF02086 D12 class N6 adenine-specific DNA methyltransferase C1O47_10675 PF02899 Phage integrase, N-terminal SAM-like domain C1O47_10675 PF00589 Phage integrase family C1O47_10695 PF00465 Iron-containing alcohol dehydrogenase C1O47_10700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1O47_10715 PF07977 FabA-like domain C1O47_10715 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1O47_10720 PF00483 Nucleotidyl transferase C1O47_10730 PF00795 Carbon-nitrogen hydrolase C1O47_10745 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_10745 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1O47_10745 PF03173 Putative carbohydrate binding domain C1O47_10745 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_10760 PF01578 Cytochrome C assembly protein C1O47_10770 PF01497 Periplasmic binding protein C1O47_10775 PF00005 ABC transporter C1O47_10780 PF01032 FecCD transport family C1O47_10785 PF01032 FecCD transport family C1O47_10820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1O47_10820 PF01367 5'-3' exonuclease, C-terminal SAM fold C1O47_10820 PF01612 3'-5' exonuclease C1O47_10820 PF00476 DNA polymerase family A C1O47_10835 PF10397 Adenylosuccinate lyase C-terminus C1O47_10835 PF00206 Lyase C1O47_10840 PF01546 Peptidase family M20/M25/M40 C1O47_10840 PF07687 Peptidase dimerisation domain C1O47_10860 PF00701 Dihydrodipicolinate synthetase family C1O47_10875 PF00425 chorismate binding enzyme C1O47_10880 PF00117 Glutamine amidotransferase class-I C1O47_10885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1O47_10885 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O47_10900 PF04073 Aminoacyl-tRNA editing domain C1O47_10945 PF06738 Putative threonine/serine exporter C1O47_10950 PF06738 Putative threonine/serine exporter C1O47_10950 PF12821 Threonine/Serine exporter, ThrE C1O47_10960 PF00742 Homoserine dehydrogenase C1O47_10960 PF01842 ACT domain C1O47_10960 PF03447 Homoserine dehydrogenase, NAD binding domain C1O47_10965 PF00696 Amino acid kinase family C1O47_10965 PF01842 ACT domain C1O47_10965 PF13840 ACT domain C1O47_10975 PF09529 Integral membrane protein (intg_mem_TP0381) C1O47_10985 PF02867 Ribonucleotide reductase, barrel domain C1O47_10985 PF08471 Class II vitamin B12-dependent ribonucleotide reductase C1O47_10990 PF08501 Shikimate dehydrogenase substrate binding domain C1O47_10990 PF01488 Shikimate / quinate 5-dehydrogenase C1O47_10990 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1O47_10995 PF14815 NUDIX domain C1O47_10995 PF00633 Helix-hairpin-helix motif C1O47_10995 PF00730 HhH-GPD superfamily base excision DNA repair protein C1O47_11000 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1O47_11005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1O47_11005 PF00391 PEP-utilising enzyme, mobile domain C1O47_11005 PF02896 PEP-utilising enzyme, TIM barrel domain C1O47_11015 PF00342 Phosphoglucose isomerase C1O47_11025 PF17785 PUA-like domain C1O47_11025 PF10672 S-adenosylmethionine-dependent methyltransferase C1O47_11035 PF02310 B12 binding domain C1O47_11035 PF01642 Methylmalonyl-CoA mutase C1O47_11040 PF01642 Methylmalonyl-CoA mutase C1O47_11070 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1O47_11070 PF03807 NADP oxidoreductase coenzyme F420-dependent C1O47_11075 PF03352 Methyladenine glycosylase C1O47_11095 PF01212 Beta-eliminating lyase C1O47_11110 PF03147 Ferredoxin-fold anticodon binding domain C1O47_11110 PF03483 B3/4 domain C1O47_11110 PF01588 Putative tRNA binding domain C1O47_11110 PF03484 tRNA synthetase B5 domain C1O47_11110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1O47_11115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1O47_11115 PF01409 tRNA synthetases class II core domain (F) C1O47_11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O47_11135 PF00183 Hsp90 protein C1O47_11160 PF00842 Alanine racemase, C-terminal domain C1O47_11160 PF01168 Alanine racemase, N-terminal domain C1O47_11165 PF02082 Transcriptional regulator C1O47_11170 PF01053 Cys/Met metabolism PLP-dependent enzyme C1O47_11175 PF00291 Pyridoxal-phosphate dependent enzyme C1O47_11180 PF02581 Thiamine monophosphate synthase C1O47_11185 PF02110 Hydroxyethylthiazole kinase family C1O47_11200 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_11200 PF07691 PA14 domain C1O47_11200 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_11205 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_11205 PF03173 Putative carbohydrate binding domain C1O47_11205 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1O47_11205 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_11215 PF00293 NUDIX domain C1O47_11230 PF02075 Crossover junction endodeoxyribonuclease RuvC C1O47_11235 PF00270 DEAD/DEAH box helicase C1O47_11235 PF00271 Helicase conserved C-terminal domain C1O47_11240 PF00753 Metallo-beta-lactamase superfamily C1O47_11245 PF04909 Amidohydrolase C1O47_11260 PF13533 Biotin-lipoyl like C1O47_11265 PF00873 AcrB/AcrD/AcrF family C1O47_11270 PF00186 Dihydrofolate reductase C1O47_11275 PF00303 Thymidylate synthase C1O47_11280 PF13396 Phospholipase_D-nuclease N-terminal C1O47_11280 PF13091 PLD-like domain C1O47_11285 PF00364 Biotin-requiring enzyme C1O47_11285 PF00682 HMGL-like C1O47_11285 PF02436 Conserved carboxylase domain C1O47_11295 PF01554 MatE C1O47_11300 PF10609 NUBPL iron-transfer P-loop NTPase C1O47_11315 PF08502 LeuA allosteric (dimerisation) domain C1O47_11315 PF00682 HMGL-like C1O47_11325 PF01432 Peptidase family M3 C1O47_11330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O47_11335 PF00873 AcrB/AcrD/AcrF family C1O47_11340 PF02321 Outer membrane efflux protein C1O47_11380 PF00654 Voltage gated chloride channel C1O47_11395 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1O47_11395 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1O47_11405 PF02684 Lipid-A-disaccharide synthetase C1O47_11410 PF09335 SNARE associated Golgi protein C1O47_11470 PF09827 CRISPR associated protein Cas2 C1O47_11475 PF01867 CRISPR associated protein Cas1 C1O47_11490 PF09704 CRISPR-associated protein (Cas_Cas5) C1O47_11510 PF00171 Aldehyde dehydrogenase family C1O47_11530 PF00199 Catalase C1O47_11530 PF06628 Catalase-related immune-responsive C1O47_11530 PF18011 C-terminal domain found in long catalases C1O47_11545 PF01578 Cytochrome C assembly protein C1O47_11550 PF02915 Rubrerythrin C1O47_11555 PF13302 Acetyltransferase (GNAT) domain C1O47_11565 PF01580 FtsK/SpoIIIE family C1O47_11565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1O47_11565 PF17854 FtsK alpha domain C1O47_11565 PF09397 Ftsk gamma domain C1O47_11580 PF02563 Polysaccharide biosynthesis/export protein C1O47_11580 PF10531 SLBB domain C1O47_11585 PF13614 AAA domain C1O47_11595 PF02397 Bacterial sugar transferase C1O47_11600 PF00535 Glycosyl transferase family 2 C1O47_11605 PF01943 Polysaccharide biosynthesis protein C1O47_11610 PF00535 Glycosyl transferase family 2 C1O47_11615 PF01501 Glycosyl transferase family 8 C1O47_11615 PF08759 Glycosyltransferase GT-D fold C1O47_11620 PF00535 Glycosyl transferase family 2 C1O47_11635 PF13439 Glycosyltransferase Family 4 C1O47_11640 PF00534 Glycosyl transferases group 1 C1O47_11640 PF13439 Glycosyltransferase Family 4 C1O47_11665 PF00535 Glycosyl transferase family 2 C1O47_11670 PF00132 Bacterial transferase hexapeptide (six repeats) C1O47_11685 PF01757 Acyltransferase family C1O47_11700 PF01636 Phosphotransferase enzyme family C1O47_11705 PF05025 RbsD / FucU transport protein family C1O47_11710 PF00155 Aminotransferase class I and II C1O47_11715 PF08264 Anticodon-binding domain of tRNA C1O47_11715 PF09334 tRNA synthetases class I (M) C1O47_11720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O47_11725 PF00390 Malic enzyme, N-terminal domain C1O47_11725 PF03949 Malic enzyme, NAD binding domain C1O47_11725 PF01515 Phosphate acetyl/butaryl transferase C1O47_11735 PF00722 Glycosyl hydrolases family 16 C1O47_11740 PF00933 Glycosyl hydrolase family 3 N terminal domain C1O47_11760 PF04055 Radical SAM superfamily C1O47_11760 PF06969 HemN C-terminal domain C1O47_11795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O47_11795 PF02403 Seryl-tRNA synthetase N-terminal domain C1O47_11800 PF00107 Zinc-binding dehydrogenase C1O47_11800 PF08240 Alcohol dehydrogenase GroES-like domain C1O47_11810 PF00795 Carbon-nitrogen hydrolase C1O47_11815 PF17863 AAA lid domain C1O47_11815 PF07726 ATPase family associated with various cellular activities (AAA) C1O47_11825 PF01195 Peptidyl-tRNA hydrolase C1O47_11830 PF00912 Transglycosylase C1O47_11830 PF00905 Penicillin binding protein transpeptidase domain C1O47_11845 PF00709 Adenylosuccinate synthetase C1O47_11865 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C1O47_11865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1O47_11870 PF00374 Nickel-dependent hydrogenase C1O47_11880 PF01750 Hydrogenase maturation protease C1O47_11885 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1O47_11915 PF00881 Nitroreductase family C1O47_11920 PF00155 Aminotransferase class I and II C1O47_11955 PF05683 Fumarase C-terminus C1O47_11955 PF05681 Fumarate hydratase (Fumerase) C1O47_11975 PF01555 DNA methylase C1O47_11995 PF07691 PA14 domain C1O47_11995 PF02838 Glycosyl hydrolase family 20, domain 2 C1O47_11995 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O47_12000 PF02881 SRP54-type protein, helical bundle domain C1O47_12000 PF00448 SRP54-type protein, GTPase domain C1O47_12000 PF02978 Signal peptide binding domain C1O47_12045 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1O47_12050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C1O47_12065 PF13193 AMP-binding enzyme C-terminal domain C1O47_12065 PF00501 AMP-binding enzyme C1O47_12095 PF01432 Peptidase family M3 C1O47_12105 PF05746 DALR anticodon binding domain C1O47_12105 PF00750 tRNA synthetases class I (R) C1O47_12105 PF03485 Arginyl tRNA synthetase N terminal domain C1O47_12140 PF17755 UvrA DNA-binding domain C1O47_12140 PF00005 ABC transporter C1O47_12140 PF17760 UvrA interaction domain C1O47_12145 PF02810 SEC-C motif C1O47_12145 PF07517 SecA DEAD-like domain C1O47_12145 PF01043 SecA preprotein cross-linking domain C1O47_12145 PF07516 SecA Wing and Scaffold domain C1O47_12150 PF00696 Amino acid kinase family C1O47_12150 PF00583 Acetyltransferase (GNAT) family C1O47_12160 PF00293 NUDIX domain