locus-tag class description C1O60_00005 PF00308 Bacterial dnaA protein C1O60_00005 PF11638 DnaA N-terminal domain C1O60_00005 PF08299 Bacterial dnaA protein helix-turn-helix C1O60_00010 PF00005 ABC transporter C1O60_00030 PF01784 NIF3 (NGG1p interacting factor 3) C1O60_00035 PF00849 RNA pseudouridylate synthase C1O60_00040 PF00800 Prephenate dehydratase C1O60_00040 PF01817 Chorismate mutase type II C1O60_00040 PF01842 ACT domain C1O60_00050 PF00533 BRCA1 C Terminus (BRCT) domain C1O60_00050 PF03120 NAD-dependent DNA ligase OB-fold domain C1O60_00050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1O60_00050 PF01653 NAD-dependent DNA ligase adenylation domain C1O60_00055 PF01066 CDP-alcohol phosphatidyltransferase C1O60_00065 PF00270 DEAD/DEAH box helicase C1O60_00065 PF00271 Helicase conserved C-terminal domain C1O60_00085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O60_00100 PF07690 Major Facilitator Superfamily C1O60_00105 PF04552 Sigma-54, DNA binding domain C1O60_00105 PF04963 Sigma-54 factor, core binding domain C1O60_00105 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1O60_00115 PF02567 Phenazine biosynthesis-like protein C1O60_00120 PF02659 Putative manganese efflux pump C1O60_00140 PF12002 MgsA AAA+ ATPase C terminal C1O60_00140 PF00004 ATPase family associated with various cellular activities (AAA) C1O60_00140 PF16193 AAA C-terminal domain C1O60_00150 PF01370 NAD dependent epimerase/dehydratase family C1O60_00155 PF01636 Phosphotransferase enzyme family C1O60_00175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O60_00175 PF09180 Prolyl-tRNA synthetase, C-terminal C1O60_00175 PF03129 Anticodon binding domain C1O60_00220 PF13520 Amino acid permease C1O60_00225 PF04960 Glutaminase C1O60_00240 PF01235 Sodium:alanine symporter family C1O60_00250 PF00472 RF-1 domain C1O60_00250 PF03462 PCRF domain C1O60_00255 PF05175 Methyltransferase small domain C1O60_00255 PF17827 PrmC N-terminal domain C1O60_00260 PF17764 3′ DNA-binding domain (3′BD) C1O60_00260 PF00271 Helicase conserved C-terminal domain C1O60_00260 PF18074 Primosomal protein N C-terminal domain C1O60_00260 PF04851 Type III restriction enzyme, res subunit C1O60_00260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1O60_00265 PF01678 Diaminopimelate epimerase C1O60_00285 PF01209 ubiE/COQ5 methyltransferase family C1O60_00290 PF01554 MatE C1O60_00335 PF00682 HMGL-like C1O60_00335 PF08502 LeuA allosteric (dimerisation) domain C1O60_00340 PF01368 DHH family C1O60_00340 PF02272 DHHA1 domain C1O60_00340 PF17768 RecJ OB domain C1O60_00345 PF07555 beta-N-acetylglucosaminidase C1O60_00345 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_00360 PF00005 ABC transporter C1O60_00370 PF02151 UvrB/uvrC motif C1O60_00375 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C1O60_00380 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C1O60_00385 PF17871 AAA lid domain C1O60_00385 PF10431 C-terminal, D2-small domain, of ClpB protein C1O60_00385 PF02861 Clp amino terminal domain, pathogenicity island component C1O60_00385 PF00004 ATPase family associated with various cellular activities (AAA) C1O60_00385 PF07724 AAA domain (Cdc48 subfamily) C1O60_00395 PF00581 Rhodanese-like domain C1O60_00400 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1O60_00405 PF08502 LeuA allosteric (dimerisation) domain C1O60_00405 PF00682 HMGL-like C1O60_00420 PF02542 YgbB family C1O60_00420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1O60_00430 PF00579 tRNA synthetases class I (W and Y) C1O60_00440 PF13277 YmdB-like protein C1O60_00450 PF00899 ThiF family C1O60_00515 PF03793 PASTA domain C1O60_00515 PF00069 Protein kinase domain C1O60_00535 PF13195 Protein of unknown function (DUF4011) C1O60_00535 PF13086 AAA domain C1O60_00535 PF13087 AAA domain C1O60_00535 PF13195 Protein of unknown function (DUF4011) C1O60_00535 PF13087 AAA domain C1O60_00535 PF13086 AAA domain C1O60_00615 PF00294 pfkB family carbohydrate kinase C1O60_00625 PF09297 NADH pyrophosphatase zinc ribbon domain C1O60_00625 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C1O60_00625 PF00293 NUDIX domain C1O60_00635 PF00155 Aminotransferase class I and II C1O60_00640 PF00069 Protein kinase domain C1O60_00645 PF13614 AAA domain C1O60_00650 PF00069 Protein kinase domain C1O60_00690 PF08676 MutL C terminal dimerisation domain C1O60_00690 PF01119 DNA mismatch repair protein, C-terminal domain C1O60_00705 PF04343 Protein of unknown function, DUF488 C1O60_00715 PF03900 Porphobilinogen deaminase, C-terminal domain C1O60_00715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1O60_00720 PF01488 Shikimate / quinate 5-dehydrogenase C1O60_00720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1O60_00730 PF02649 Type I GTP cyclohydrolase folE2 C1O60_00735 PF01084 Ribosomal protein S18 C1O60_00740 PF00471 Ribosomal protein L33 C1O60_00745 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1O60_00750 PF00480 ROK family C1O60_00755 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C1O60_00755 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C1O60_00755 PF01189 16S rRNA methyltransferase RsmB/F C1O60_00765 PF00293 NUDIX domain C1O60_00770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O60_00770 PF00529 HlyD membrane-fusion protein of T1SS C1O60_00775 PF00005 ABC transporter C1O60_00775 PF12704 MacB-like periplasmic core domain C1O60_00775 PF02687 FtsX-like permease family C1O60_00780 PF00005 ABC transporter C1O60_00780 PF02687 FtsX-like permease family C1O60_00780 PF12704 MacB-like periplasmic core domain C1O60_00785 PF02321 Outer membrane efflux protein C1O60_00795 PF00873 AcrB/AcrD/AcrF family C1O60_00800 PF00529 HlyD membrane-fusion protein of T1SS C1O60_00800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O60_00845 PF18389 TrmO C-terminal domain C1O60_00845 PF01980 tRNA-methyltransferase O C1O60_00850 PF01979 Amidohydrolase family C1O60_00855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1O60_00855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1O60_00860 PF00156 Phosphoribosyl transferase domain C1O60_00865 PF00731 AIR carboxylase C1O60_00880 PF04371 Porphyromonas-type peptidyl-arginine deiminase C1O60_00890 PF02163 Peptidase family M50 C1O60_00890 PF17820 PDZ domain C1O60_00895 PF01594 AI-2E family transporter C1O60_00900 PF00884 Sulfatase C1O60_00900 PF16385 Domain of unknown function C1O60_00910 PF07670 Nucleoside recognition C1O60_00910 PF17910 FeoB cytosolic helical domain C1O60_00910 PF02421 Ferrous iron transport protein B C1O60_00910 PF04023 FeoA domain C1O60_00910 PF07664 Ferrous iron transport protein B C terminus C1O60_00940 PF00521 DNA gyrase/topoisomerase IV, subunit A C1O60_00975 PF02195 ParB-like nuclease domain C1O60_00975 PF17762 HTH domain found in ParB protein C1O60_01005 PF13593 SBF-like CPA transporter family (DUF4137) C1O60_01010 PF00579 tRNA synthetases class I (W and Y) C1O60_01010 PF01479 S4 domain C1O60_01030 PF12911 N-terminal TM domain of oligopeptide transport permease C C1O60_01030 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_01035 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_01040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1O60_01050 PF16653 Saccharopine dehydrogenase C-terminal domain C1O60_01050 PF03435 Saccharopine dehydrogenase NADP binding domain C1O60_01080 PF12327 FtsZ family, C-terminal domain C1O60_01080 PF00091 Tubulin/FtsZ family, GTPase domain C1O60_01085 PF02491 SHS2 domain inserted in FTSA C1O60_01095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1O60_01095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1O60_01095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1O60_01095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1O60_01100 PF00664 ABC transporter transmembrane region C1O60_01100 PF00005 ABC transporter C1O60_01105 PF00005 ABC transporter C1O60_01105 PF00664 ABC transporter transmembrane region C1O60_01115 PF02405 Permease MlaE C1O60_01120 PF00005 ABC transporter C1O60_01125 PF02470 MlaD protein C1O60_01150 PF00437 Type II/IV secretion system protein C1O60_01155 PF00437 Type II/IV secretion system protein C1O60_01160 PF00639 PPIC-type PPIASE domain C1O60_01160 PF09312 SurA N-terminal domain C1O60_01175 PF02348 Cytidylyltransferase C1O60_01180 PF06418 CTP synthase N-terminus C1O60_01180 PF00117 Glutamine amidotransferase class-I C1O60_01185 PF00474 Sodium:solute symporter family C1O60_01215 PF13180 PDZ domain C1O60_01220 PF00905 Penicillin binding protein transpeptidase domain C1O60_01220 PF00912 Transglycosylase C1O60_01220 PF17092 Penicillin-binding protein OB-like domain C1O60_01225 PF02646 RmuC family C1O60_01230 PF13419 Haloacid dehalogenase-like hydrolase C1O60_01235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1O60_01235 PF00132 Bacterial transferase hexapeptide (six repeats) C1O60_01245 PF12704 MacB-like periplasmic core domain C1O60_01245 PF02687 FtsX-like permease family C1O60_01245 PF02687 FtsX-like permease family C1O60_01245 PF12704 MacB-like periplasmic core domain C1O60_01250 PF03527 RHS protein C1O60_01295 PF04389 Peptidase family M28 C1O60_01305 PF07859 alpha/beta hydrolase fold C1O60_01305 PF13472 GDSL-like Lipase/Acylhydrolase family C1O60_01310 PF00133 tRNA synthetases class I (I, L, M and V) C1O60_01310 PF08264 Anticodon-binding domain of tRNA C1O60_01315 PF01252 Signal peptidase (SPase) II C1O60_01330 PF00266 Aminotransferase class-V C1O60_01355 PF01245 Ribosomal protein L19 C1O60_01370 PF01039 Carboxyl transferase domain C1O60_01380 PF00682 HMGL-like C1O60_01380 PF02436 Conserved carboxylase domain C1O60_01380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O60_01380 PF00364 Biotin-requiring enzyme C1O60_01380 PF00289 Biotin carboxylase, N-terminal domain C1O60_01380 PF02785 Biotin carboxylase C-terminal domain C1O60_01385 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C1O60_01390 PF02237 Biotin protein ligase C terminal domain C1O60_01390 PF03099 Biotin/lipoate A/B protein ligase family C1O60_01390 PF08279 HTH domain C1O60_01395 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1O60_01395 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1O60_01410 PF00483 Nucleotidyl transferase C1O60_01415 PF16363 GDP-mannose 4,6 dehydratase C1O60_01420 PF00365 Phosphofructokinase C1O60_01430 PF02637 GatB domain C1O60_01430 PF02934 GatB/GatE catalytic domain C1O60_01435 PF00205 Thiamine pyrophosphate enzyme, central domain C1O60_01435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1O60_01435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O60_01455 PF00690 Cation transporter/ATPase, N-terminus C1O60_01455 PF00689 Cation transporting ATPase, C-terminus C1O60_01460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O60_01460 PF00529 HlyD membrane-fusion protein of T1SS C1O60_01465 PF00873 AcrB/AcrD/AcrF family C1O60_01470 PF00939 Sodium:sulfate symporter transmembrane region C1O60_01480 PF08543 Phosphomethylpyrimidine kinase C1O60_01545 PF01327 Polypeptide deformylase C1O60_01550 PF00107 Zinc-binding dehydrogenase C1O60_01550 PF08240 Alcohol dehydrogenase GroES-like domain C1O60_01555 PF00343 Carbohydrate phosphorylase C1O60_01555 PF11897 Protein of unknown function (DUF3417) C1O60_01560 PF00520 Ion transport protein C1O60_01560 PF00027 Cyclic nucleotide-binding domain C1O60_01565 PF03960 ArsC family C1O60_01570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O60_01570 PF10996 Beta-Casp domain C1O60_01570 PF00753 Metallo-beta-lactamase superfamily C1O60_01590 PF00849 RNA pseudouridylate synthase C1O60_01590 PF01479 S4 domain C1O60_01600 PF01746 tRNA (Guanine-1)-methyltransferase C1O60_01605 PF03462 PCRF domain C1O60_01605 PF00472 RF-1 domain C1O60_01615 PF00575 S1 RNA binding domain C1O60_01665 PF02548 Ketopantoate hydroxymethyltransferase C1O60_01670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1O60_01675 PF05173 Dihydrodipicolinate reductase, C-terminus C1O60_01675 PF01113 Dihydrodipicolinate reductase, N-terminus C1O60_01680 PF00701 Dihydrodipicolinate synthetase family C1O60_01720 PF00578 AhpC/TSA family C1O60_01745 PF02130 Uncharacterized protein family UPF0054 C1O60_01745 PF07883 Cupin domain C1O60_01750 PF01966 HD domain C1O60_01750 PF07698 7TM receptor with intracellular HD hydrolase C1O60_01750 PF07697 7TM-HD extracellular C1O60_01755 PF02504 Fatty acid synthesis protein C1O60_01760 PF01783 Ribosomal L32p protein family C1O60_01770 PF01230 HIT domain C1O60_01775 PF01300 Telomere recombination C1O60_01775 PF03481 Putative GTP-binding controlling metal-binding C1O60_01780 PF01202 Shikimate kinase C1O60_01785 PF00886 Ribosomal protein S16 C1O60_01800 PF00589 Phage integrase family C1O60_01800 PF02899 Phage integrase, N-terminal SAM-like domain C1O60_01810 PF02699 Preprotein translocase subunit C1O60_01815 PF01702 Queuine tRNA-ribosyltransferase C1O60_01820 PF02390 Putative methyltransferase C1O60_01830 PF05036 Sporulation related domain C1O60_01830 PF03330 Lytic transglycolase C1O60_01835 PF01351 Ribonuclease HII C1O60_01835 PF11858 Domain of unknown function (DUF3378) C1O60_01840 PF00216 Bacterial DNA-binding protein C1O60_01875 PF01618 MotA/TolQ/ExbB proton channel family C1O60_01895 PF00703 Glycosyl hydrolases family 2 C1O60_01895 PF16355 Domain of unknown function (DUF4982) C1O60_01895 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1O60_01895 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O60_01895 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O60_01900 PF08264 Anticodon-binding domain of tRNA C1O60_01900 PF00133 tRNA synthetases class I (I, L, M and V) C1O60_01900 PF10458 Valyl tRNA synthetase tRNA binding arm C1O60_01910 PF00238 Ribosomal protein L14p/L23e C1O60_01915 PF00366 Ribosomal protein S17 C1O60_01920 PF00831 Ribosomal L29 protein C1O60_01925 PF00252 Ribosomal protein L16p/L10e C1O60_01930 PF07650 KH domain C1O60_01930 PF00189 Ribosomal protein S3, C-terminal domain C1O60_01935 PF00237 Ribosomal protein L22p/L17e C1O60_01945 PF00203 Ribosomal protein S19 C1O60_01950 PF00181 Ribosomal Proteins L2, RNA binding domain C1O60_01950 PF03947 Ribosomal Proteins L2, C-terminal domain C1O60_01955 PF00276 Ribosomal protein L23 C1O60_01960 PF00573 Ribosomal protein L4/L1 family C1O60_01965 PF00297 Ribosomal protein L3 C1O60_01970 PF00338 Ribosomal protein S10p/S20e C1O60_01975 PF03764 Elongation factor G, domain IV C1O60_01975 PF00009 Elongation factor Tu GTP binding domain C1O60_01975 PF03144 Elongation factor Tu domain 2 C1O60_01975 PF14492 Elongation Factor G, domain II C1O60_01975 PF00679 Elongation factor G C-terminus C1O60_01980 PF00177 Ribosomal protein S7p/S5e C1O60_01985 PF00164 Ribosomal protein S12/S23 C1O60_01995 PF01676 Metalloenzyme superfamily C1O60_01995 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1O60_02005 PF00512 His Kinase A (phospho-acceptor) domain C1O60_02005 PF00989 PAS fold C1O60_02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_02010 PF02954 Bacterial regulatory protein, Fis family C1O60_02010 PF00072 Response regulator receiver domain C1O60_02010 PF00158 Sigma-54 interaction domain C1O60_02020 PF02609 Exonuclease VII small subunit C1O60_02025 PF02779 Transketolase, pyrimidine binding domain C1O60_02025 PF02780 Transketolase, C-terminal domain C1O60_02025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1O60_02040 PF03739 Lipopolysaccharide export system permease LptF/LptG C1O60_02045 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1O60_02045 PF01926 50S ribosome-binding GTPase C1O60_02050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O60_02050 PF00005 ABC transporter C1O60_02070 PF12704 MacB-like periplasmic core domain C1O60_02070 PF00005 ABC transporter C1O60_02070 PF02687 FtsX-like permease family C1O60_02080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1O60_02080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1O60_02110 PF02683 Cytochrome C biogenesis protein transmembrane region C1O60_02110 PF11412 Disulphide bond corrector protein DsbC C1O60_02125 PF01624 MutS domain I C1O60_02125 PF05192 MutS domain III C1O60_02125 PF05190 MutS family domain IV C1O60_02125 PF00488 MutS domain V C1O60_02125 PF05188 MutS domain II C1O60_02140 PF00004 ATPase family associated with various cellular activities (AAA) C1O60_02140 PF01434 Peptidase family M41 C1O60_02140 PF17862 AAA+ lid domain C1O60_02155 PF00378 Enoyl-CoA hydratase/isomerase C1O60_02195 PF00005 ABC transporter C1O60_02210 PF00005 ABC transporter C1O60_02210 PF12857 TOBE-like domain C1O60_02220 PF00106 short chain dehydrogenase C1O60_02235 PF00158 Sigma-54 interaction domain C1O60_02235 PF01590 GAF domain C1O60_02235 PF02954 Bacterial regulatory protein, Fis family C1O60_02250 PF00654 Voltage gated chloride channel C1O60_02260 PF07691 PA14 domain C1O60_02260 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_02260 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_02275 PF00282 Pyridoxal-dependent decarboxylase conserved domain C1O60_02285 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1O60_02285 PF14579 Helix-hairpin-helix motif C1O60_02285 PF01336 OB-fold nucleic acid binding domain C1O60_02285 PF02811 PHP domain C1O60_02285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1O60_02290 PF01180 Dihydroorotate dehydrogenase C1O60_02295 PF02581 Thiamine monophosphate synthase C1O60_02315 PF03471 Transporter associated domain C1O60_02315 PF00571 CBS domain C1O60_02315 PF01595 Cyclin M transmembrane N-terminal domain C1O60_02320 PF00571 CBS domain C1O60_02320 PF03471 Transporter associated domain C1O60_02320 PF01595 Cyclin M transmembrane N-terminal domain C1O60_02325 PF00575 S1 RNA binding domain C1O60_02325 PF03725 3' exoribonuclease family, domain 2 C1O60_02325 PF01138 3' exoribonuclease family, domain 1 C1O60_02325 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1O60_02325 PF00013 KH domain C1O60_02330 PF00312 Ribosomal protein S15 C1O60_02360 PF01416 tRNA pseudouridine synthase C1O60_02365 PF01467 Cytidylyltransferase-like C1O60_02385 PF07963 Prokaryotic N-terminal methylation motif C1O60_02385 PF14245 Type IV pilin PilA C1O60_02390 PF03725 3' exoribonuclease family, domain 2 C1O60_02390 PF01138 3' exoribonuclease family, domain 1 C1O60_02400 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_02400 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_02400 PF07691 PA14 domain C1O60_02410 PF02457 DisA bacterial checkpoint controller nucleotide-binding C1O60_02420 PF00005 ABC transporter C1O60_02425 PF02569 Pantoate-beta-alanine ligase C1O60_02435 PF00132 Bacterial transferase hexapeptide (six repeats) C1O60_02435 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1O60_02440 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_02445 PF00005 ABC transporter C1O60_02460 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_02460 PF07555 beta-N-acetylglucosaminidase C1O60_02475 PF13580 SIS domain C1O60_02480 PF01467 Cytidylyltransferase-like C1O60_02480 PF00294 pfkB family carbohydrate kinase C1O60_02490 PF01165 Ribosomal protein S21 C1O60_02495 PF00202 Aminotransferase class-III C1O60_02510 PF00083 Sugar (and other) transporter C1O60_02520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C1O60_02520 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O60_02525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1O60_02525 PF00925 GTP cyclohydrolase II C1O60_02530 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1O60_02535 PF01029 NusB family C1O60_02540 PF02881 SRP54-type protein, helical bundle domain C1O60_02540 PF00448 SRP54-type protein, GTPase domain C1O60_02545 PF04055 Radical SAM superfamily C1O60_02550 PF00772 DnaB-like helicase N terminal domain C1O60_02550 PF03796 DnaB-like helicase C terminal domain C1O60_02560 PF04191 Phospholipid methyltransferase C1O60_02565 PF02464 Competence-damaged protein C1O60_02565 PF18146 Damage-inducible protein CinA KH domain C1O60_02565 PF00994 Probable molybdopterin binding domain C1O60_02570 PF00391 PEP-utilising enzyme, mobile domain C1O60_02570 PF00224 Pyruvate kinase, barrel domain C1O60_02570 PF02887 Pyruvate kinase, alpha/beta domain C1O60_02575 PF00583 Acetyltransferase (GNAT) family C1O60_02600 PF01479 S4 domain C1O60_02600 PF00163 Ribosomal protein S4/S9 N-terminal domain C1O60_02605 PF00411 Ribosomal protein S11 C1O60_02610 PF00416 Ribosomal protein S13/S18 C1O60_02615 PF08331 Domain of unknown function (DUF1730) C1O60_02630 PF17782 DprA winged helix domain C1O60_02630 PF02481 DNA recombination-mediator protein A C1O60_02635 PF00768 D-alanyl-D-alanine carboxypeptidase C1O60_02635 PF07943 Penicillin-binding protein 5, C-terminal domain C1O60_02640 PF01926 50S ribosome-binding GTPase C1O60_02640 PF06071 Protein of unknown function (DUF933) C1O60_02650 PF01597 Glycine cleavage H-protein C1O60_02655 PF02347 Glycine cleavage system P-protein C1O60_02670 PF16385 Domain of unknown function C1O60_02670 PF00884 Sulfatase C1O60_02680 PF00271 Helicase conserved C-terminal domain C1O60_02680 PF00270 DEAD/DEAH box helicase C1O60_02680 PF03880 DbpA RNA binding domain C1O60_02700 PF07681 DoxX C1O60_02705 PF02769 AIR synthase related protein, C-terminal domain C1O60_02705 PF00586 AIR synthase related protein, N-terminal domain C1O60_02710 PF00156 Phosphoribosyl transferase domain C1O60_02715 PF08281 Sigma-70, region 4 C1O60_02715 PF04542 Sigma-70 region 2 C1O60_02735 PF02441 Flavoprotein C1O60_02755 PF03976 Polyphosphate kinase 2 (PPK2) C1O60_02760 PF00455 DeoR C terminal sensor domain C1O60_02760 PF08220 DeoR-like helix-turn-helix domain C1O60_02775 PF00266 Aminotransferase class-V C1O60_02780 PF00266 Aminotransferase class-V C1O60_02785 PF02441 Flavoprotein C1O60_02785 PF04127 DNA / pantothenate metabolism flavoprotein C1O60_02790 PF03193 RsgA GTPase C1O60_02820 PF03976 Polyphosphate kinase 2 (PPK2) C1O60_02830 PF08305 NPCBM/NEW2 domain C1O60_02840 PF12146 Serine aminopeptidase, S33 C1O60_02845 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1O60_02855 PF01016 Ribosomal L27 protein C1O60_02860 PF01475 Ferric uptake regulator family C1O60_02865 PF00005 ABC transporter C1O60_02870 PF01458 Uncharacterized protein family (UPF0051) C1O60_02875 PF01458 Uncharacterized protein family (UPF0051) C1O60_02885 PF00884 Sulfatase C1O60_02895 PF00202 Aminotransferase class-III C1O60_02930 PF00535 Glycosyl transferase family 2 C1O60_02940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1O60_02960 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1O60_02960 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1O60_02965 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1O60_02965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O60_02970 PF00231 ATP synthase C1O60_02975 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1O60_02975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O60_02975 PF00306 ATP synthase alpha/beta chain, C terminal domain C1O60_02980 PF00213 ATP synthase delta (OSCP) subunit C1O60_02985 PF00430 ATP synthase B/B' CF(0) C1O60_02990 PF00137 ATP synthase subunit C C1O60_02995 PF00119 ATP synthase A chain C1O60_03005 PF00905 Penicillin binding protein transpeptidase domain C1O60_03005 PF03717 Penicillin-binding Protein dimerisation domain C1O60_03050 PF00899 ThiF family C1O60_03055 PF01380 SIS domain C1O60_03055 PF00571 CBS domain C1O60_03075 PF06426 Serine acetyltransferase, N-terminal C1O60_03075 PF00132 Bacterial transferase hexapeptide (six repeats) C1O60_03085 PF00171 Aldehyde dehydrogenase family C1O60_03090 PF01472 PUA domain C1O60_03090 PF00696 Amino acid kinase family C1O60_03095 PF02780 Transketolase, C-terminal domain C1O60_03095 PF00456 Transketolase, thiamine diphosphate binding domain C1O60_03095 PF02779 Transketolase, pyrimidine binding domain C1O60_03100 PF01272 Transcription elongation factor, GreA/GreB, C-term C1O60_03100 PF03449 Transcription elongation factor, N-terminal C1O60_03105 PF01259 SAICAR synthetase C1O60_03115 PF00586 AIR synthase related protein, N-terminal domain C1O60_03115 PF02769 AIR synthase related protein, C-terminal domain C1O60_03115 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1O60_03130 PF05343 M42 glutamyl aminopeptidase C1O60_03140 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O60_03140 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O60_03140 PF00703 Glycosyl hydrolases family 2 C1O60_03140 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1O60_03150 PF00575 S1 RNA binding domain C1O60_03150 PF10150 Ribonuclease E/G family C1O60_03175 PF02472 Biopolymer transport protein ExbD/TolR C1O60_03190 PF00730 HhH-GPD superfamily base excision DNA repair protein C1O60_03215 PF00218 Indole-3-glycerol phosphate synthase C1O60_03220 PF02021 Uncharacterised protein family UPF0102 C1O60_03225 PF01351 Ribonuclease HII C1O60_03230 PF01595 Cyclin M transmembrane N-terminal domain C1O60_03230 PF00571 CBS domain C1O60_03230 PF03471 Transporter associated domain C1O60_03240 PF00253 Ribosomal protein S14p/S29e C1O60_03250 PF00764 Arginosuccinate synthase C1O60_03255 PF00884 Sulfatase C1O60_03260 PF01029 NusB family C1O60_03260 PF01189 16S rRNA methyltransferase RsmB/F C1O60_03265 PF00121 Triosephosphate isomerase C1O60_03280 PF00884 Sulfatase C1O60_03310 PF03819 MazG nucleotide pyrophosphohydrolase domain C1O60_03320 PF00570 HRDC domain C1O60_03320 PF01612 3'-5' exonuclease C1O60_03335 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1O60_03345 PF05193 Peptidase M16 inactive domain C1O60_03345 PF00675 Insulinase (Peptidase family M16) C1O60_03365 PF02677 Epoxyqueuosine reductase QueH C1O60_03370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1O60_03370 PF03466 LysR substrate binding domain C1O60_03375 PF02219 Methylenetetrahydrofolate reductase C1O60_03380 PF01717 Cobalamin-independent synthase, Catalytic domain C1O60_03380 PF08267 Cobalamin-independent synthase, N-terminal domain C1O60_03400 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O60_03400 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C1O60_03405 PF03734 L,D-transpeptidase catalytic domain C1O60_03425 PF00291 Pyridoxal-phosphate dependent enzyme C1O60_03425 PF00585 C-terminal regulatory domain of Threonine dehydratase C1O60_03430 PF02545 Maf-like protein C1O60_03435 PF01926 50S ribosome-binding GTPase C1O60_03435 PF13167 GTP-binding GTPase N-terminal C1O60_03435 PF16360 GTP-binding GTPase Middle Region C1O60_03440 PF00069 Protein kinase domain C1O60_03455 PF00586 AIR synthase related protein, N-terminal domain C1O60_03455 PF02769 AIR synthase related protein, C-terminal domain C1O60_03465 PF02224 Cytidylate kinase C1O60_03475 PF02463 RecF/RecN/SMC N terminal domain C1O60_03485 PF00035 Double-stranded RNA binding motif C1O60_03485 PF14622 Ribonuclease-III-like C1O60_03500 PF03372 Endonuclease/Exonuclease/phosphatase family C1O60_03505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1O60_03520 PF01502 Phosphoribosyl-AMP cyclohydrolase C1O60_03525 PF09115 DNA polymerase III, delta subunit, C terminal C1O60_03540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O60_03540 PF02142 MGS-like domain C1O60_03540 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1O60_03560 PF08241 Methyltransferase domain C1O60_03565 PF00795 Carbon-nitrogen hydrolase C1O60_03565 PF02540 NAD synthase C1O60_03570 PF00893 Small Multidrug Resistance protein C1O60_03610 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1O60_03610 PF05491 RuvB C-terminal winged helix domain C1O60_03610 PF17864 RuvB AAA lid domain C1O60_03615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1O60_03615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1O60_03620 PF00667 FAD binding domain C1O60_03620 PF00258 Flavodoxin C1O60_03620 PF00175 Oxidoreductase NAD-binding domain C1O60_03625 PF00535 Glycosyl transferase family 2 C1O60_03630 PF00535 Glycosyl transferase family 2 C1O60_03655 PF00534 Glycosyl transferases group 1 C1O60_03665 PF01757 Acyltransferase family C1O60_03690 PF12631 MnmE helical domain C1O60_03690 PF01926 50S ribosome-binding GTPase C1O60_03690 PF10396 GTP-binding protein TrmE N-terminus C1O60_03700 PF00589 Phage integrase family C1O60_03700 PF02899 Phage integrase, N-terminal SAM-like domain C1O60_03720 PF12728 Helix-turn-helix domain C1O60_03720 PF12727 PBP superfamily domain C1O60_03765 PF02384 N-6 DNA Methylase C1O60_03775 PF02796 Helix-turn-helix domain of resolvase C1O60_03775 PF00239 Resolvase, N terminal domain C1O60_03790 PF03458 UPF0126 domain C1O60_03795 PF10996 Beta-Casp domain C1O60_03795 PF00753 Metallo-beta-lactamase superfamily C1O60_03795 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O60_03800 PF02381 MraZ protein, putative antitoxin-like C1O60_03805 PF01795 MraW methylase family C1O60_03815 PF03793 PASTA domain C1O60_03815 PF03717 Penicillin-binding Protein dimerisation domain C1O60_03815 PF00905 Penicillin binding protein transpeptidase domain C1O60_03820 PF08245 Mur ligase middle domain C1O60_03820 PF02875 Mur ligase family, glutamate ligase domain C1O60_03820 PF01225 Mur ligase family, catalytic domain C1O60_03825 PF08245 Mur ligase middle domain C1O60_03825 PF02875 Mur ligase family, glutamate ligase domain C1O60_03825 PF01225 Mur ligase family, catalytic domain C1O60_03830 PF00953 Glycosyl transferase family 4 C1O60_03830 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1O60_03835 PF08245 Mur ligase middle domain C1O60_03835 PF02875 Mur ligase family, glutamate ligase domain C1O60_03845 PF01098 Cell cycle protein C1O60_03850 PF04101 Glycosyltransferase family 28 C-terminal domain C1O60_03850 PF03033 Glycosyltransferase family 28 N-terminal domain C1O60_03855 PF01225 Mur ligase family, catalytic domain C1O60_03855 PF02875 Mur ligase family, glutamate ligase domain C1O60_03855 PF08245 Mur ligase middle domain C1O60_03860 PF07478 D-ala D-ala ligase C-terminus C1O60_03860 PF01820 D-ala D-ala ligase N-terminus C1O60_03870 PF00154 recA bacterial DNA recombination protein C1O60_03875 PF01520 N-acetylmuramoyl-L-alanine amidase C1O60_03880 PF03099 Biotin/lipoate A/B protein ligase family C1O60_03885 PF00330 Aconitase family (aconitate hydratase) C1O60_03890 PF00694 Aconitase C-terminal domain C1O60_03900 PF17820 PDZ domain C1O60_03900 PF13180 PDZ domain C1O60_03915 PF01761 3-dehydroquinate synthase C1O60_03925 PF00005 ABC transporter C1O60_03925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O60_03935 PF00889 Elongation factor TS C1O60_03950 PF00793 DAHP synthetase I family C1O60_03965 PF00005 ABC transporter C1O60_03965 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1O60_03975 PF08245 Mur ligase middle domain C1O60_03975 PF01225 Mur ligase family, catalytic domain C1O60_03975 PF02875 Mur ligase family, glutamate ligase domain C1O60_03980 PF00691 OmpA family C1O60_03985 PF13361 UvrD-like helicase C-terminal domain C1O60_03985 PF00580 UvrD/REP helicase N-terminal domain C1O60_03990 PF01638 HxlR-like helix-turn-helix C1O60_04000 PF17760 UvrA interaction domain C1O60_04000 PF00005 ABC transporter C1O60_04000 PF17755 UvrA DNA-binding domain C1O60_04040 PF00152 tRNA synthetases class II (D, K and N) C1O60_04040 PF01336 OB-fold nucleic acid binding domain C1O60_04050 PF00085 Thioredoxin C1O60_04095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1O60_04095 PF03466 LysR substrate binding domain C1O60_04100 PF03601 Conserved hypothetical protein 698 C1O60_04105 PF00266 Aminotransferase class-V C1O60_04120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1O60_04120 PF01842 ACT domain C1O60_04120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1O60_04130 PF04055 Radical SAM superfamily C1O60_04135 PF07497 Rho termination factor, RNA-binding domain C1O60_04135 PF07498 Rho termination factor, N-terminal domain C1O60_04135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O60_04140 PF01709 Transcriptional regulator C1O60_04145 PF16916 Dimerisation domain of Zinc Transporter C1O60_04145 PF01545 Cation efflux family C1O60_04150 PF02254 TrkA-N domain C1O60_04150 PF00999 Sodium/hydrogen exchanger family C1O60_04160 PF02547 Queuosine biosynthesis protein C1O60_04165 PF12127 SigmaW regulon antibacterial C1O60_04175 PF05690 Thiazole biosynthesis protein ThiG C1O60_04180 PF13520 Amino acid permease C1O60_04195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1O60_04195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1O60_04200 PF01116 Fructose-bisphosphate aldolase class-II C1O60_04210 PF01063 Amino-transferase class IV C1O60_04215 PF00722 Glycosyl hydrolases family 16 C1O60_04220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1O60_04220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1O60_04240 PF01018 GTP1/OBG C1O60_04240 PF01926 50S ribosome-binding GTPase C1O60_04245 PF01636 Phosphotransferase enzyme family C1O60_04275 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1O60_04280 PF00571 CBS domain C1O60_04280 PF00478 IMP dehydrogenase / GMP reductase domain C1O60_04295 PF12464 Maltose acetyltransferase C1O60_04295 PF14602 Hexapeptide repeat of succinyl-transferase C1O60_04300 PF13419 Haloacid dehalogenase-like hydrolase C1O60_04325 PF00793 DAHP synthetase I family C1O60_04330 PF00114 Pilin (bacterial filament) C1O60_04330 PF07963 Prokaryotic N-terminal methylation motif C1O60_04340 PF02261 Aspartate decarboxylase C1O60_04345 PF06574 FAD synthetase C1O60_04345 PF01687 Riboflavin kinase C1O60_04350 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1O60_04350 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1O60_04365 PF00149 Calcineurin-like phosphoesterase C1O60_04370 PF08759 Glycosyltransferase GT-D fold C1O60_04370 PF01501 Glycosyl transferase family 8 C1O60_04375 PF01501 Glycosyl transferase family 8 C1O60_04375 PF00535 Glycosyl transferase family 2 C1O60_04385 PF01370 NAD dependent epimerase/dehydratase family C1O60_04390 PF00535 Glycosyl transferase family 2 C1O60_04410 PF01757 Acyltransferase family C1O60_04425 PF03600 Citrate transporter C1O60_04425 PF02080 TrkA-C domain C1O60_04460 PF01301 Glycosyl hydrolases family 35 C1O60_04465 PF00300 Histidine phosphatase superfamily (branch 1) C1O60_04470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1O60_04470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1O60_04475 PF01757 Acyltransferase family C1O60_04480 PF07690 Major Facilitator Superfamily C1O60_04485 PF03061 Thioesterase superfamily C1O60_04505 PF00565 Staphylococcal nuclease homologue C1O60_04520 PF02195 ParB-like nuclease domain C1O60_04525 PF11922 Domain of unknown function (DUF3440) C1O60_04525 PF01507 Phosphoadenosine phosphosulfate reductase family C1O60_04540 PF00180 Isocitrate/isopropylmalate dehydrogenase C1O60_04555 PF13335 Magnesium chelatase, subunit ChlI C-terminal C1O60_04555 PF01078 Magnesium chelatase, subunit ChlI C1O60_04565 PF01053 Cys/Met metabolism PLP-dependent enzyme C1O60_04575 PF04055 Radical SAM superfamily C1O60_04575 PF13186 Iron-sulfur cluster-binding domain C1O60_04590 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1O60_04590 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1O60_04595 PF02660 Glycerol-3-phosphate acyltransferase C1O60_04605 PF01336 OB-fold nucleic acid binding domain C1O60_04605 PF00152 tRNA synthetases class II (D, K and N) C1O60_04625 PF01638 HxlR-like helix-turn-helix C1O60_04635 PF00977 Histidine biosynthesis protein C1O60_04645 PF02386 Cation transport protein C1O60_04655 PF11898 Domain of unknown function (DUF3418) C1O60_04655 PF04408 Helicase associated domain (HA2) C1O60_04655 PF00271 Helicase conserved C-terminal domain C1O60_04655 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C1O60_04655 PF00270 DEAD/DEAH box helicase C1O60_04660 PF10369 Small subunit of acetolactate synthase C1O60_04665 PF13180 PDZ domain C1O60_04665 PF00595 PDZ domain C1O60_04675 PF13932 GidA associated domain C1O60_04675 PF01134 Glucose inhibited division protein A C1O60_04680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1O60_04680 PF01872 RibD C-terminal domain C1O60_04685 PF02767 DNA polymerase III beta subunit, central domain C1O60_04685 PF02768 DNA polymerase III beta subunit, C-terminal domain C1O60_04685 PF00712 DNA polymerase III beta subunit, N-terminal domain C1O60_04710 PF01476 LysM domain C1O60_04710 PF00877 NlpC/P60 family C1O60_04715 PF01026 TatD related DNase C1O60_04725 PF02929 Beta galactosidase small chain C1O60_04725 PF16353 Domain of unknown function(DUF4981) C1O60_04725 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O60_04725 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O60_04725 PF00703 Glycosyl hydrolases family 2 C1O60_04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_04740 PF02702 Osmosensitive K+ channel His kinase sensor domain C1O60_04740 PF13492 GAF domain C1O60_04740 PF00512 His Kinase A (phospho-acceptor) domain C1O60_04740 PF13493 Domain of unknown function (DUF4118) C1O60_04745 PF00072 Response regulator receiver domain C1O60_04745 PF00486 Transcriptional regulatory protein, C terminal C1O60_04755 PF03814 Potassium-transporting ATPase A subunit C1O60_04765 PF02669 K+-transporting ATPase, c chain C1O60_04780 PF10431 C-terminal, D2-small domain, of ClpB protein C1O60_04780 PF02861 Clp amino terminal domain, pathogenicity island component C1O60_04780 PF17871 AAA lid domain C1O60_04780 PF00004 ATPase family associated with various cellular activities (AAA) C1O60_04780 PF07724 AAA domain (Cdc48 subfamily) C1O60_04830 PF03477 ATP cone domain C1O60_04840 PF00916 Sulfate permease family C1O60_04840 PF01740 STAS domain C1O60_04845 PF00206 Lyase C1O60_04845 PF14698 Argininosuccinate lyase C-terminal C1O60_04865 PF00113 Enolase, C-terminal TIM barrel domain C1O60_04865 PF03952 Enolase, N-terminal domain C1O60_04870 PF01261 Xylose isomerase-like TIM barrel C1O60_04880 PF00754 F5/8 type C domain C1O60_04880 PF13088 BNR repeat-like domain C1O60_04880 PF02973 Sialidase, N-terminal domain C1O60_04885 PF01966 HD domain C1O60_04885 PF01336 OB-fold nucleic acid binding domain C1O60_04895 PF04055 Radical SAM superfamily C1O60_04895 PF01938 TRAM domain C1O60_04895 PF00919 Uncharacterized protein family UPF0004 C1O60_04900 PF05958 tRNA (Uracil-5-)-methyltransferase C1O60_04900 PF01938 TRAM domain C1O60_04915 PF12161 HsdM N-terminal domain C1O60_04915 PF02384 N-6 DNA Methylase C1O60_04920 PF01420 Type I restriction modification DNA specificity domain C1O60_04930 PF18766 SWI2/SNF2 ATPase C1O60_04930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C1O60_04930 PF12008 Type I restriction and modification enzyme - subunit R C terminal C1O60_04940 PF00216 Bacterial DNA-binding protein C1O60_04945 PF16875 Glycosyl hydrolase family 36 N-terminal domain C1O60_04945 PF16874 Glycosyl hydrolase family 36 C-terminal domain C1O60_04965 PF06826 Predicted Permease Membrane Region C1O60_04965 PF02080 TrkA-C domain C1O60_04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_04975 PF00989 PAS fold C1O60_04975 PF00512 His Kinase A (phospho-acceptor) domain C1O60_04980 PF00939 Sodium:sulfate symporter transmembrane region C1O60_05005 PF00884 Sulfatase C1O60_05005 PF08019 Phosphoethanolamine transferase EptA/EptB C1O60_05010 PF02915 Rubrerythrin C1O60_05020 PF05343 M42 glutamyl aminopeptidase C1O60_05025 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_05025 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_05025 PF07691 PA14 domain C1O60_05035 PF00245 Alkaline phosphatase C1O60_05040 PF01741 Large-conductance mechanosensitive channel, MscL C1O60_05045 PF00202 Aminotransferase class-III C1O60_05055 PF01132 Elongation factor P (EF-P) OB domain C1O60_05055 PF08207 Elongation factor P (EF-P) KOW-like domain C1O60_05055 PF09285 Elongation factor P, C-terminal C1O60_05065 PF00403 Heavy-metal-associated domain C1O60_05070 PF02463 RecF/RecN/SMC N terminal domain C1O60_05075 PF03099 Biotin/lipoate A/B protein ligase family C1O60_05075 PF12706 Beta-lactamase superfamily domain C1O60_05080 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1O60_05110 PF02817 e3 binding domain C1O60_05110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O60_05110 PF00364 Biotin-requiring enzyme C1O60_05115 PF02780 Transketolase, C-terminal domain C1O60_05115 PF02779 Transketolase, pyrimidine binding domain C1O60_05120 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1O60_05120 PF02779 Transketolase, pyrimidine binding domain C1O60_05120 PF02780 Transketolase, C-terminal domain C1O60_05135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O60_05135 PF00529 HlyD membrane-fusion protein of T1SS C1O60_05140 PF00873 AcrB/AcrD/AcrF family C1O60_05150 PF07548 Chlamydia polymorphic membrane protein middle domain C1O60_05150 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1O60_05150 PF03797 Autotransporter beta-domain C1O60_05180 PF01751 Toprim domain C1O60_05180 PF01131 DNA topoisomerase C1O60_05200 PF01510 N-acetylmuramoyl-L-alanine amidase C1O60_05200 PF01471 Putative peptidoglycan binding domain C1O60_05200 PF01476 LysM domain C1O60_05205 PF00330 Aconitase family (aconitate hydratase) C1O60_05205 PF00694 Aconitase C-terminal domain C1O60_05220 PF01641 SelR domain C1O60_05220 PF01625 Peptide methionine sulfoxide reductase C1O60_05235 PF01139 tRNA-splicing ligase RtcB C1O60_05245 PF07690 Major Facilitator Superfamily C1O60_05255 PF01923 Cobalamin adenosyltransferase C1O60_05265 PF17876 Cold shock domain C1O60_05265 PF08206 Ribonuclease B OB domain C1O60_05265 PF00773 RNB domain C1O60_05265 PF00575 S1 RNA binding domain C1O60_05290 PF01136 Peptidase family U32 C1O60_05290 PF12392 Collagenase C1O60_05295 PF02875 Mur ligase family, glutamate ligase domain C1O60_05295 PF08245 Mur ligase middle domain C1O60_05310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O60_05315 PF00176 SNF2 family N-terminal domain C1O60_05315 PF00271 Helicase conserved C-terminal domain C1O60_05315 PF12419 SNF2 Helicase protein C1O60_05320 PF02872 5'-nucleotidase, C-terminal domain C1O60_05320 PF00149 Calcineurin-like phosphoesterase C1O60_05325 PF05036 Sporulation related domain C1O60_05325 PF03330 Lytic transglycolase C1O60_05330 PF01513 ATP-NAD kinase C1O60_05335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1O60_05335 PF00467 KOW motif C1O60_05340 PF00281 Ribosomal protein L5 C1O60_05340 PF00673 ribosomal L5P family C-terminus C1O60_05345 PF00410 Ribosomal protein S8 C1O60_05350 PF00347 Ribosomal protein L6 C1O60_05355 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1O60_05360 PF00333 Ribosomal protein S5, N-terminal domain C1O60_05360 PF03719 Ribosomal protein S5, C-terminal domain C1O60_05365 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1O60_05370 PF00344 SecY translocase C1O60_05375 PF05191 Adenylate kinase, active site lid C1O60_05380 PF00557 Metallopeptidase family M24 C1O60_05395 PF13090 Polyphosphate kinase C-terminal domain 2 C1O60_05395 PF17941 Polyphosphate kinase C-terminal domain 1 C1O60_05395 PF02503 Polyphosphate kinase middle domain C1O60_05395 PF13089 Polyphosphate kinase N-terminal domain C1O60_05400 PF01501 Glycosyl transferase family 8 C1O60_05415 PF00535 Glycosyl transferase family 2 C1O60_05420 PF01531 Glycosyl transferase family 11 C1O60_05425 PF00535 Glycosyl transferase family 2 C1O60_05440 PF00535 Glycosyl transferase family 2 C1O60_05445 PF01965 DJ-1/PfpI family C1O60_05450 PF00364 Biotin-requiring enzyme C1O60_05450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O60_05450 PF02817 e3 binding domain C1O60_05455 PF01979 Amidohydrolase family C1O60_05460 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1O60_05470 PF02554 Carbon starvation protein CstA C1O60_05480 PF00884 Sulfatase C1O60_05485 PF02033 Ribosome-binding factor A C1O60_05490 PF11987 Translation-initiation factor 2 C1O60_05490 PF04760 Translation initiation factor IF-2, N-terminal region C1O60_05490 PF00009 Elongation factor Tu GTP binding domain C1O60_05495 PF08529 NusA N-terminal domain C1O60_05495 PF00575 S1 RNA binding domain C1O60_05495 PF13184 NusA-like KH domain C1O60_05500 PF03372 Endonuclease/Exonuclease/phosphatase family C1O60_05505 PF01725 Ham1 family C1O60_05510 PF06962 Putative rRNA methylase C1O60_05515 PF04015 Domain of unknown function (DUF362) C1O60_05525 PF00005 ABC transporter C1O60_05525 PF01061 ABC-2 type transporter C1O60_05525 PF00498 FHA domain C1O60_05545 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C1O60_05550 PF02397 Bacterial sugar transferase C1O60_05555 PF00288 GHMP kinases N terminal domain C1O60_05555 PF08544 GHMP kinases C terminal C1O60_05555 PF10509 Galactokinase galactose-binding signature C1O60_05560 PF00474 Sodium:solute symporter family C1O60_05565 PF13361 UvrD-like helicase C-terminal domain C1O60_05565 PF00580 UvrD/REP helicase N-terminal domain C1O60_05570 PF00551 Formyl transferase C1O60_05570 PF02911 Formyl transferase, C-terminal domain C1O60_05580 PF03309 Type III pantothenate kinase C1O60_05585 PF00550 Phosphopantetheine attachment site C1O60_05600 PF02580 D-Tyr-tRNA(Tyr) deacylase C1O60_05610 PF13085 2Fe-2S iron-sulfur cluster binding domain C1O60_05615 PF00890 FAD binding domain C1O60_05615 PF02910 Fumarate reductase flavoprotein C-term C1O60_05675 PF00005 ABC transporter C1O60_05675 PF16326 ABC transporter C-terminal domain C1O60_05675 PF12848 ABC transporter C1O60_05685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1O60_05685 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C1O60_05695 PF01595 Cyclin M transmembrane N-terminal domain C1O60_05695 PF03471 Transporter associated domain C1O60_05695 PF00571 CBS domain C1O60_05710 PF12146 Serine aminopeptidase, S33 C1O60_05720 PF00248 Aldo/keto reductase family C1O60_05730 PF01055 Glycosyl hydrolases family 31 C1O60_05730 PF13802 Galactose mutarotase-like C1O60_05730 PF17137 Domain of unknown function (DUF5110) C1O60_05730 PF16338 Domain of unknown function (DUF4968) C1O60_05745 PF04397 LytTr DNA-binding domain C1O60_05745 PF00072 Response regulator receiver domain C1O60_05780 PF00561 alpha/beta hydrolase fold C1O60_05785 PF01914 MarC family integral membrane protein C1O60_05815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1O60_05820 PF12848 ABC transporter C1O60_05820 PF16326 ABC transporter C-terminal domain C1O60_05820 PF00005 ABC transporter C1O60_05865 PF01555 DNA methylase C1O60_05895 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_05895 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_05900 PF00884 Sulfatase C1O60_05900 PF16347 Domain of unknown function (DUF4976) C1O60_05910 PF00009 Elongation factor Tu GTP binding domain C1O60_05910 PF03144 Elongation factor Tu domain 2 C1O60_05910 PF06421 GTP-binding protein LepA C-terminus C1O60_05910 PF00679 Elongation factor G C-terminus C1O60_05930 PF04998 RNA polymerase Rpb1, domain 5 C1O60_05930 PF05000 RNA polymerase Rpb1, domain 4 C1O60_05930 PF04983 RNA polymerase Rpb1, domain 3 C1O60_05930 PF00623 RNA polymerase Rpb1, domain 2 C1O60_05930 PF04997 RNA polymerase Rpb1, domain 1 C1O60_05935 PF00562 RNA polymerase Rpb2, domain 6 C1O60_05935 PF10385 RNA polymerase beta subunit external 1 domain C1O60_05935 PF04565 RNA polymerase Rpb2, domain 3 C1O60_05935 PF04560 RNA polymerase Rpb2, domain 7 C1O60_05935 PF04561 RNA polymerase Rpb2, domain 2 C1O60_05935 PF04563 RNA polymerase beta subunit C1O60_05940 PF00542 Ribosomal protein L7/L12 C-terminal domain C1O60_05940 PF16320 Ribosomal protein L7/L12 dimerisation domain C1O60_05945 PF00466 Ribosomal protein L10 C1O60_05950 PF00687 Ribosomal protein L1p/L10e family C1O60_05955 PF03946 Ribosomal protein L11, N-terminal domain C1O60_05955 PF00298 Ribosomal protein L11, RNA binding domain C1O60_05960 PF00467 KOW motif C1O60_05960 PF02357 Transcription termination factor nusG C1O60_05975 PF03144 Elongation factor Tu domain 2 C1O60_05975 PF03143 Elongation factor Tu C-terminal domain C1O60_05975 PF00009 Elongation factor Tu GTP binding domain C1O60_05985 PF00814 Glycoprotease family C1O60_05990 PF06689 ClpX C4-type zinc finger C1O60_05990 PF07724 AAA domain (Cdc48 subfamily) C1O60_05990 PF10431 C-terminal, D2-small domain, of ClpB protein C1O60_05995 PF00574 Clp protease C1O60_06000 PF05697 Bacterial trigger factor protein (TF) C1O60_06000 PF05698 Bacterial trigger factor protein (TF) C-terminus C1O60_06000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1O60_06005 PF01103 Surface antigen C1O60_06005 PF07244 Surface antigen variable number repeat C1O60_06015 PF02219 Methylenetetrahydrofolate reductase C1O60_06035 PF00873 AcrB/AcrD/AcrF family C1O60_06080 PF13649 Methyltransferase domain C1O60_06085 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1O60_06085 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1O60_06085 PF02772 S-adenosylmethionine synthetase, central domain C1O60_06090 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1O60_06090 PF05221 S-adenosyl-L-homocysteine hydrolase C1O60_06110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1O60_06120 PF00884 Sulfatase C1O60_06120 PF16347 Domain of unknown function (DUF4976) C1O60_06125 PF00570 HRDC domain C1O60_06125 PF00270 DEAD/DEAH box helicase C1O60_06125 PF00271 Helicase conserved C-terminal domain C1O60_06125 PF16124 RecQ zinc-binding C1O60_06125 PF09382 RQC domain C1O60_06135 PF00534 Glycosyl transferases group 1 C1O60_06145 PF02910 Fumarate reductase flavoprotein C-term C1O60_06145 PF00890 FAD binding domain C1O60_06150 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1O60_06150 PF00588 SpoU rRNA Methylase family C1O60_06200 PF07664 Ferrous iron transport protein B C terminus C1O60_06200 PF17910 FeoB cytosolic helical domain C1O60_06200 PF02421 Ferrous iron transport protein B C1O60_06200 PF07670 Nucleoside recognition C1O60_06215 PF14376 Haem-binding domain C1O60_06215 PF03150 Di-haem cytochrome c peroxidase C1O60_06215 PF00034 Cytochrome c C1O60_06220 PF04055 Radical SAM superfamily C1O60_06220 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1O60_06225 PF14437 MafB19-like deaminase C1O60_06230 PF00480 ROK family C1O60_06235 PF00403 Heavy-metal-associated domain C1O60_06240 PF07498 Rho termination factor, N-terminal domain C1O60_06240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1O60_06240 PF07497 Rho termination factor, RNA-binding domain C1O60_06245 PF03958 Bacterial type II/III secretion system short domain C1O60_06245 PF00263 Bacterial type II and III secretion system protein C1O60_06270 PF05343 M42 glutamyl aminopeptidase C1O60_06275 PF01790 Prolipoprotein diacylglyceryl transferase C1O60_06285 PF00557 Metallopeptidase family M24 C1O60_06285 PF05195 Aminopeptidase P, N-terminal domain C1O60_06290 PF01634 ATP phosphoribosyltransferase C1O60_06290 PF08029 HisG, C-terminal domain C1O60_06315 PF00989 PAS fold C1O60_06315 PF00512 His Kinase A (phospho-acceptor) domain C1O60_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_06315 PF11808 Phosphate regulon sensor protein PhoR C1O60_06320 PF00486 Transcriptional regulatory protein, C terminal C1O60_06320 PF00072 Response regulator receiver domain C1O60_06325 PF00920 Dehydratase family C1O60_06350 PF00884 Sulfatase C1O60_06385 PF01370 NAD dependent epimerase/dehydratase family C1O60_06390 PF00398 Ribosomal RNA adenine dimethylase C1O60_06410 PF01554 MatE C1O60_06415 PF02386 Cation transport protein C1O60_06430 PF13539 D-alanyl-D-alanine carboxypeptidase C1O60_06555 PF03814 Potassium-transporting ATPase A subunit C1O60_06565 PF02669 K+-transporting ATPase, c chain C1O60_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_06570 PF13492 GAF domain C1O60_06570 PF13493 Domain of unknown function (DUF4118) C1O60_06570 PF02702 Osmosensitive K+ channel His kinase sensor domain C1O60_06570 PF00512 His Kinase A (phospho-acceptor) domain C1O60_06580 PF12867 DinB superfamily C1O60_06580 PF03781 Sulfatase-modifying factor enzyme 1 C1O60_06590 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1O60_06590 PF00753 Metallo-beta-lactamase superfamily C1O60_06600 PF03793 PASTA domain C1O60_06600 PF00069 Protein kinase domain C1O60_06610 PF13411 MerR HTH family regulatory protein C1O60_06620 PF01212 Beta-eliminating lyase C1O60_06650 PF00005 ABC transporter C1O60_06660 PF17863 AAA lid domain C1O60_06660 PF07726 ATPase family associated with various cellular activities (AAA) C1O60_06665 PF04235 Protein of unknown function (DUF418) C1O60_06685 PF08338 Domain of unknown function (DUF1731) C1O60_06685 PF01370 NAD dependent epimerase/dehydratase family C1O60_06700 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1O60_06700 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1O60_06705 PF00005 ABC transporter C1O60_06710 PF00392 Bacterial regulatory proteins, gntR family C1O60_06710 PF07729 FCD domain C1O60_06730 PF00884 Sulfatase C1O60_06740 PF03952 Enolase, N-terminal domain C1O60_06740 PF00113 Enolase, C-terminal TIM barrel domain C1O60_06755 PF02424 ApbE family C1O60_06770 PF00830 Ribosomal L28 family C1O60_06785 PF03652 Holliday junction resolvase C1O60_06790 PF00483 Nucleotidyl transferase C1O60_06790 PF01050 Mannose-6-phosphate isomerase C1O60_06795 PF01255 Putative undecaprenyl diphosphate synthase C1O60_06800 PF00986 DNA gyrase B subunit, carboxyl terminus C1O60_06800 PF00204 DNA gyrase B C1O60_06800 PF01751 Toprim domain C1O60_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_06805 PF00288 GHMP kinases N terminal domain C1O60_06805 PF08544 GHMP kinases C terminal C1O60_06815 PF13307 Helicase C-terminal domain C1O60_06815 PF06733 DEAD_2 C1O60_06820 PF00005 ABC transporter C1O60_06845 PF00696 Amino acid kinase family C1O60_06850 PF01544 CorA-like Mg2+ transporter protein C1O60_06855 PF03948 Ribosomal protein L9, C-terminal domain C1O60_06855 PF01281 Ribosomal protein L9, N-terminal domain C1O60_06860 PF01808 AICARFT/IMPCHase bienzyme C1O60_06860 PF02142 MGS-like domain C1O60_06865 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1O60_06870 PF01648 4'-phosphopantetheinyl transferase superfamily C1O60_06880 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C1O60_06880 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C1O60_06885 PF01471 Putative peptidoglycan binding domain C1O60_06885 PF01476 LysM domain C1O60_06885 PF01510 N-acetylmuramoyl-L-alanine amidase C1O60_06890 PF00271 Helicase conserved C-terminal domain C1O60_06890 PF17191 RecG wedge domain C1O60_06890 PF00270 DEAD/DEAH box helicase C1O60_06900 PF00037 4Fe-4S binding domain C1O60_06900 PF13247 4Fe-4S dicluster domain C1O60_06910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1O60_06920 PF01761 3-dehydroquinate synthase C1O60_06975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1O60_06985 PF00571 CBS domain C1O60_06985 PF02833 DHHA2 domain C1O60_06985 PF07085 DRTGG domain C1O60_06985 PF01368 DHH family C1O60_06995 PF02575 YbaB/EbfC DNA-binding family C1O60_07000 PF12169 DNA polymerase III subunits gamma and tau domain III C1O60_07020 PF04002 RadC-like JAB domain C1O60_07025 PF03853 YjeF-related protein N-terminus C1O60_07025 PF01256 Carbohydrate kinase C1O60_07030 PF01176 Translation initiation factor 1A / IF-1 C1O60_07035 PF00572 Ribosomal protein L13 C1O60_07040 PF00380 Ribosomal protein S9/S16 C1O60_07045 PF02590 Predicted SPOUT methyltransferase C1O60_07050 PF02151 UvrB/uvrC motif C1O60_07050 PF08459 UvrC Helix-hairpin-helix N-terminal C1O60_07050 PF01541 GIY-YIG catalytic domain C1O60_07055 PF01618 MotA/TolQ/ExbB proton channel family C1O60_07060 PF02472 Biopolymer transport protein ExbD/TolR C1O60_07070 PF17092 Penicillin-binding protein OB-like domain C1O60_07070 PF00905 Penicillin binding protein transpeptidase domain C1O60_07070 PF00912 Transglycosylase C1O60_07075 PF00459 Inositol monophosphatase family C1O60_07080 PF02542 YgbB family C1O60_07090 PF01238 Phosphomannose isomerase type I C1O60_07100 PF03553 Na+/H+ antiporter family C1O60_07105 PF01370 NAD dependent epimerase/dehydratase family C1O60_07110 PF16363 GDP-mannose 4,6 dehydratase C1O60_07115 PF00117 Glutamine amidotransferase class-I C1O60_07115 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1O60_07120 PF02142 MGS-like domain C1O60_07120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1O60_07120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1O60_07125 PF12437 Glutamine synthetase type III N terminal C1O60_07125 PF18318 Glutamine synthetase C-terminal domain C1O60_07125 PF00120 Glutamine synthetase, catalytic domain C1O60_07130 PF01645 Conserved region in glutamate synthase C1O60_07130 PF04898 Glutamate synthase central domain C1O60_07130 PF00310 Glutamine amidotransferases class-II C1O60_07130 PF01493 GXGXG motif C1O60_07135 PF02096 60Kd inner membrane protein C1O60_07135 PF14849 YidC periplasmic domain C1O60_07140 PF01809 Putative membrane protein insertion efficiency factor C1O60_07145 PF00825 Ribonuclease P C1O60_07150 PF00468 Ribosomal protein L34 C1O60_07155 PF18318 Glutamine synthetase C-terminal domain C1O60_07155 PF00120 Glutamine synthetase, catalytic domain C1O60_07155 PF12437 Glutamine synthetase type III N terminal C1O60_07165 PF13472 GDSL-like Lipase/Acylhydrolase family C1O60_07165 PF07859 alpha/beta hydrolase fold C1O60_07175 PF01263 Aldose 1-epimerase C1O60_07185 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1O60_07185 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1O60_07190 PF00348 Polyprenyl synthetase C1O60_07195 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1O60_07195 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O60_07210 PF03315 Serine dehydratase beta chain C1O60_07210 PF03313 Serine dehydratase alpha chain C1O60_07215 PF00085 Thioredoxin C1O60_07215 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O60_07265 PF00999 Sodium/hydrogen exchanger family C1O60_07265 PF02254 TrkA-N domain C1O60_07270 PF00149 Calcineurin-like phosphoesterase C1O60_07275 PF02073 Thermophilic metalloprotease (M29) C1O60_07280 PF00551 Formyl transferase C1O60_07285 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1O60_07285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1O60_07300 PF01751 Toprim domain C1O60_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_07300 PF00986 DNA gyrase B subunit, carboxyl terminus C1O60_07300 PF00204 DNA gyrase B C1O60_07305 PF03989 DNA gyrase C-terminal domain, beta-propeller C1O60_07305 PF00521 DNA gyrase/topoisomerase IV, subunit A C1O60_07315 PF01136 Peptidase family U32 C1O60_07320 PF03781 Sulfatase-modifying factor enzyme 1 C1O60_07340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1O60_07340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1O60_07345 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_07350 PF00005 ABC transporter C1O60_07360 PF00009 Elongation factor Tu GTP binding domain C1O60_07365 PF01507 Phosphoadenosine phosphosulfate reductase family C1O60_07370 PF01507 Phosphoadenosine phosphosulfate reductase family C1O60_07375 PF00291 Pyridoxal-phosphate dependent enzyme C1O60_07380 PF01895 PhoU domain C1O60_07390 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_07395 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_07400 PF12849 PBP superfamily domain C1O60_07405 PF00005 ABC transporter C1O60_07415 PF01263 Aldose 1-epimerase C1O60_07430 PF05193 Peptidase M16 inactive domain C1O60_07430 PF00675 Insulinase (Peptidase family M16) C1O60_07445 PF14602 Hexapeptide repeat of succinyl-transferase C1O60_07445 PF00132 Bacterial transferase hexapeptide (six repeats) C1O60_07445 PF12464 Maltose acetyltransferase C1O60_07480 PF01765 Ribosome recycling factor C1O60_07485 PF00696 Amino acid kinase family C1O60_07490 PF00924 Mechanosensitive ion channel C1O60_07490 PF05552 Conserved TM helix C1O60_07500 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1O60_07500 PF00578 AhpC/TSA family C1O60_07505 PF00209 Sodium:neurotransmitter symporter family C1O60_07530 PF00109 Beta-ketoacyl synthase, N-terminal domain C1O60_07530 PF02801 Beta-ketoacyl synthase, C-terminal domain C1O60_07535 PF01641 SelR domain C1O60_07540 PF00817 impB/mucB/samB family C1O60_07540 PF11799 impB/mucB/samB family C-terminal domain C1O60_07570 PF00005 ABC transporter C1O60_07575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O60_07580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1O60_07580 PF01411 tRNA synthetases class II (A) C1O60_07580 PF02272 DHHA1 domain C1O60_07585 PF01066 CDP-alcohol phosphatidyltransferase C1O60_07595 PF00809 Pterin binding enzyme C1O60_07605 PF04551 GcpE protein C1O60_07625 PF02801 Beta-ketoacyl synthase, C-terminal domain C1O60_07625 PF00109 Beta-ketoacyl synthase, N-terminal domain C1O60_07630 PF00155 Aminotransferase class I and II C1O60_07655 PF02938 GAD domain C1O60_07655 PF00152 tRNA synthetases class II (D, K and N) C1O60_07655 PF01336 OB-fold nucleic acid binding domain C1O60_07660 PF13393 Histidyl-tRNA synthetase C1O60_07660 PF03129 Anticodon binding domain C1O60_07665 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1O60_07670 PF17788 HypF Kae1-like domain C1O60_07670 PF00708 Acylphosphatase C1O60_07670 PF07503 HypF finger C1O60_07670 PF01300 Telomere recombination C1O60_07675 PF01455 HupF/HypC family C1O60_07680 PF01924 Hydrogenase formation hypA family C1O60_07685 PF00586 AIR synthase related protein, N-terminal domain C1O60_07685 PF02769 AIR synthase related protein, C-terminal domain C1O60_07705 PF00012 Hsp70 protein C1O60_07710 PF00166 Chaperonin 10 Kd subunit C1O60_07715 PF00118 TCP-1/cpn60 chaperonin family C1O60_07750 PF13614 AAA domain C1O60_07750 PF02706 Chain length determinant protein C1O60_07750 PF13807 G-rich domain on putative tyrosine kinase C1O60_07765 PF07499 RuvA, C-terminal domain C1O60_07765 PF01330 RuvA N terminal domain C1O60_07770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1O60_07770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1O60_07775 PF00162 Phosphoglycerate kinase C1O60_07785 PF10566 Glycoside hydrolase 97 C1O60_07785 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation C1O60_07785 PF14508 Glycosyl-hydrolase 97 N-terminal C1O60_07795 PF01555 DNA methylase C1O60_07805 PF17757 UvrB interaction domain C1O60_07805 PF03461 TRCF domain C1O60_07805 PF00270 DEAD/DEAH box helicase C1O60_07805 PF00271 Helicase conserved C-terminal domain C1O60_07805 PF02559 CarD-like/TRCF domain C1O60_07815 PF07690 Major Facilitator Superfamily C1O60_07830 PF02811 PHP domain C1O60_07835 PF01515 Phosphate acetyl/butaryl transferase C1O60_07835 PF07085 DRTGG domain C1O60_07840 PF11734 TilS substrate C-terminal domain C1O60_07840 PF01171 PP-loop family C1O60_07845 PF01197 Ribosomal protein L31 C1O60_07880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1O60_07880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1O60_07880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1O60_07885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1O60_07885 PF00056 lactate/malate dehydrogenase, NAD binding domain C1O60_07910 PF00881 Nitroreductase family C1O60_07915 PF00849 RNA pseudouridylate synthase C1O60_07915 PF01479 S4 domain C1O60_07920 PF01479 S4 domain C1O60_07920 PF00849 RNA pseudouridylate synthase C1O60_07940 PF00005 ABC transporter C1O60_07945 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_07955 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1O60_07955 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1O60_07960 PF01960 ArgJ family C1O60_07980 PF17755 UvrA DNA-binding domain C1O60_07980 PF17760 UvrA interaction domain C1O60_08010 PF02594 Uncharacterised ACR, YggU family COG1872 C1O60_08015 PF01025 GrpE C1O60_08020 PF01556 DnaJ C terminal domain C1O60_08020 PF00226 DnaJ domain C1O60_08020 PF00684 DnaJ central domain C1O60_08025 PF04452 RNA methyltransferase C1O60_08035 PF13229 Right handed beta helix region C1O60_08050 PF10502 Signal peptidase, peptidase S26 C1O60_08055 PF02913 FAD linked oxidases, C-terminal domain C1O60_08055 PF01565 FAD binding domain C1O60_08085 PF01386 Ribosomal L25p family C1O60_08085 PF14693 Ribosomal protein TL5, C-terminal domain C1O60_08100 PF00475 Imidazoleglycerol-phosphate dehydratase C1O60_08105 PF00117 Glutamine amidotransferase class-I C1O60_08110 PF01250 Ribosomal protein S6 C1O60_08115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C1O60_08130 PF07943 Penicillin-binding protein 5, C-terminal domain C1O60_08130 PF00768 D-alanyl-D-alanine carboxypeptidase C1O60_08135 PF00365 Phosphofructokinase C1O60_08145 PF02535 ZIP Zinc transporter C1O60_08160 PF00155 Aminotransferase class I and II C1O60_08165 PF03755 YicC-like family, N-terminal region C1O60_08165 PF08340 Domain of unknown function (DUF1732) C1O60_08170 PF00625 Guanylate kinase C1O60_08175 PF03600 Citrate transporter C1O60_08175 PF02080 TrkA-C domain C1O60_08180 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O60_08195 PF01040 UbiA prenyltransferase family C1O60_08230 PF01522 Polysaccharide deacetylase C1O60_08230 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain C1O60_08235 PF02355 Protein export membrane protein C1O60_08235 PF07549 SecD/SecF GG Motif C1O60_08255 PF01478 Type IV leader peptidase family C1O60_08255 PF06750 Bacterial Peptidase A24 N-terminal domain C1O60_08265 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1O60_08265 PF01000 RNA polymerase Rpb3/RpoA insert domain C1O60_08265 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1O60_08270 PF01196 Ribosomal protein L17 C1O60_08275 PF00698 Acyl transferase domain C1O60_08280 PF13419 Haloacid dehalogenase-like hydrolase C1O60_08295 PF00691 OmpA family C1O60_08355 PF00248 Aldo/keto reductase family C1O60_08360 PF03030 Inorganic H+ pyrophosphatase C1O60_08375 PF04715 Anthranilate synthase component I, N terminal region C1O60_08375 PF00425 chorismate binding enzyme C1O60_08380 PF00591 Glycosyl transferase family, a/b domain C1O60_08380 PF02885 Glycosyl transferase family, helical bundle domain C1O60_08385 PF00218 Indole-3-glycerol phosphate synthase C1O60_08390 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1O60_08400 PF00290 Tryptophan synthase alpha chain C1O60_08410 PF12951 Passenger-associated-transport-repeat C1O60_08420 PF00561 alpha/beta hydrolase fold C1O60_08425 PF00444 Ribosomal protein L36 C1O60_08445 PF04055 Radical SAM superfamily C1O60_08450 PF01228 Glycine radical C1O60_08450 PF02901 Pyruvate formate lyase-like C1O60_08490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1O60_08495 PF07690 Major Facilitator Superfamily C1O60_08510 PF17757 UvrB interaction domain C1O60_08510 PF12344 Ultra-violet resistance protein B C1O60_08510 PF02151 UvrB/uvrC motif C1O60_08510 PF04851 Type III restriction enzyme, res subunit C1O60_08510 PF00271 Helicase conserved C-terminal domain C1O60_08515 PF01632 Ribosomal protein L35 C1O60_08520 PF00453 Ribosomal protein L20 C1O60_08525 PF02163 Peptidase family M50 C1O60_08525 PF17820 PDZ domain C1O60_08540 PF12705 PD-(D/E)XK nuclease superfamily C1O60_08540 PF13361 UvrD-like helicase C-terminal domain C1O60_08540 PF00580 UvrD/REP helicase N-terminal domain C1O60_08550 PF00892 EamA-like transporter family C1O60_08555 PF07678 A-macroglobulin TED domain C1O60_08555 PF07703 Alpha-2-macroglobulin bait region domain C1O60_08555 PF00207 Alpha-2-macroglobulin family C1O60_08555 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C1O60_08555 PF01835 MG2 domain C1O60_08570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1O60_08570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1O60_08595 PF00285 Citrate synthase, C-terminal domain C1O60_08605 PF00588 SpoU rRNA Methylase family C1O60_08615 PF01668 SmpB protein C1O60_08625 PF00849 RNA pseudouridylate synthase C1O60_08635 PF00334 Nucleoside diphosphate kinase C1O60_08640 PF00535 Glycosyl transferase family 2 C1O60_08645 PF00535 Glycosyl transferase family 2 C1O60_08655 PF00482 Type II secretion system (T2SS), protein F C1O60_08660 PF00437 Type II/IV secretion system protein C1O60_08665 PF00437 Type II/IV secretion system protein C1O60_08670 PF01207 Dihydrouridine synthase (Dus) C1O60_08680 PF00155 Aminotransferase class I and II C1O60_08685 PF03023 Lipid II flippase MurJ C1O60_08690 PF01467 Cytidylyltransferase-like C1O60_08690 PF00294 pfkB family carbohydrate kinase C1O60_08695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1O60_08695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1O60_08700 PF02638 Glycosyl hydrolase-like 10 C1O60_08705 PF00731 AIR carboxylase C1O60_08710 PF02540 NAD synthase C1O60_08715 PF01969 Protein of unknown function DUF111 C1O60_08720 PF00348 Polyprenyl synthetase C1O60_08725 PF00348 Polyprenyl synthetase C1O60_08730 PF00854 POT family C1O60_08740 PF01883 Iron-sulfur cluster assembly protein C1O60_08755 PF00361 Proton-conducting membrane transporter C1O60_08760 PF00361 Proton-conducting membrane transporter C1O60_08770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1O60_08770 PF00361 Proton-conducting membrane transporter C1O60_08775 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1O60_08780 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C1O60_08790 PF00146 NADH dehydrogenase C1O60_08795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C1O60_08795 PF01568 Molydopterin dinucleotide binding domain C1O60_08795 PF00384 Molybdopterin oxidoreductase C1O60_08795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1O60_08800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1O60_08800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1O60_08800 PF10531 SLBB domain C1O60_08810 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C1O60_08820 PF01522 Polysaccharide deacetylase C1O60_08830 PF00677 Lumazine binding domain C1O60_08855 PF07548 Chlamydia polymorphic membrane protein middle domain C1O60_08855 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1O60_08855 PF03797 Autotransporter beta-domain C1O60_08865 PF02446 4-alpha-glucanotransferase C1O60_08875 PF04055 Radical SAM superfamily C1O60_08875 PF18693 TRAM domain C1O60_08875 PF00919 Uncharacterized protein family UPF0004 C1O60_08880 PF01957 NfeD-like C-terminal, partner-binding C1O60_08880 PF01972 Serine dehydrogenase proteinase C1O60_08885 PF08275 DNA primase catalytic core, N-terminal domain C1O60_08885 PF01807 CHC2 zinc finger C1O60_08885 PF10410 DnaB-helicase binding domain of primase C1O60_08890 PF00140 Sigma-70 factor, region 1.2 C1O60_08890 PF03979 Sigma-70 factor, region 1.1 C1O60_08890 PF04542 Sigma-70 region 2 C1O60_08890 PF04539 Sigma-70 region 3 C1O60_08890 PF04545 Sigma-70, region 4 C1O60_08895 PF01427 D-ala-D-ala dipeptidase C1O60_08910 PF00464 Serine hydroxymethyltransferase C1O60_08915 PF17804 Tail specific protease N-terminal domain C1O60_08915 PF00595 PDZ domain C1O60_08915 PF03572 Peptidase family S41 C1O60_08915 PF11818 C-terminal domain of tail specific protease (DUF3340) C1O60_08930 PF08482 ATP-dependent helicase C-terminal C1O60_08930 PF00271 Helicase conserved C-terminal domain C1O60_08930 PF04408 Helicase associated domain (HA2) C1O60_08930 PF00270 DEAD/DEAH box helicase C1O60_08945 PF01743 Poly A polymerase head domain C1O60_08945 PF12627 Probable RNA and SrmB- binding site of polymerase A C1O60_08945 PF13735 tRNA nucleotidyltransferase domain 2 putative C1O60_08955 PF00263 Bacterial type II and III secretion system protein C1O60_08955 PF03958 Bacterial type II/III secretion system short domain C1O60_08970 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1O60_08970 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1O60_08990 PF01207 Dihydrouridine synthase (Dus) C1O60_08995 PF02401 LytB protein C1O60_09005 PF01649 Ribosomal protein S20 C1O60_09010 PF13419 Haloacid dehalogenase-like hydrolase C1O60_09015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O60_09015 PF00205 Thiamine pyrophosphate enzyme, central domain C1O60_09015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1O60_09025 PF02666 Phosphatidylserine decarboxylase C1O60_09030 PF00834 Ribulose-phosphate 3 epimerase family C1O60_09035 PF08264 Anticodon-binding domain of tRNA C1O60_09035 PF00133 tRNA synthetases class I (I, L, M and V) C1O60_09035 PF09334 tRNA synthetases class I (M) C1O60_09035 PF13603 Leucyl-tRNA synthetase, Domain 2 C1O60_09040 PF00884 Sulfatase C1O60_09050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1O60_09055 PF17810 Arginine decarboxylase helical bundle domain C1O60_09055 PF17944 Arginine decarboxylase C-terminal helical extension C1O60_09055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1O60_09070 PF00703 Glycosyl hydrolases family 2 C1O60_09070 PF02929 Beta galactosidase small chain C1O60_09070 PF16353 Domain of unknown function(DUF4981) C1O60_09070 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O60_09070 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O60_09075 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1O60_09075 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1O60_09075 PF00703 Glycosyl hydrolases family 2 C1O60_09080 PF12002 MgsA AAA+ ATPase C terminal C1O60_09080 PF16193 AAA C-terminal domain C1O60_09080 PF00004 ATPase family associated with various cellular activities (AAA) C1O60_09085 PF07691 PA14 domain C1O60_09085 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_09085 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_09105 PF00365 Phosphofructokinase C1O60_09120 PF04055 Radical SAM superfamily C1O60_09120 PF13186 Iron-sulfur cluster-binding domain C1O60_09120 PF05402 Coenzyme PQQ synthesis protein D (PqqD) C1O60_09155 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C1O60_09170 PF02277 Phosphoribosyltransferase C1O60_09175 PF03186 CobD/Cbib protein C1O60_09180 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1O60_09180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1O60_09180 PF00155 Aminotransferase class I and II C1O60_09190 PF00593 TonB dependent receptor C1O60_09190 PF07715 TonB-dependent Receptor Plug Domain C1O60_09200 PF01301 Glycosyl hydrolases family 35 C1O60_09210 PF01979 Amidohydrolase family C1O60_09215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1O60_09215 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O60_09225 PF02817 e3 binding domain C1O60_09225 PF00364 Biotin-requiring enzyme C1O60_09225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1O60_09230 PF02779 Transketolase, pyrimidine binding domain C1O60_09230 PF00676 Dehydrogenase E1 component C1O60_09230 PF16078 2-oxoglutarate dehydrogenase N-terminus C1O60_09230 PF16870 2-oxoglutarate dehydrogenase C-terminal C1O60_09235 PF02322 Cytochrome bd terminal oxidase subunit II C1O60_09240 PF01654 Cytochrome bd terminal oxidase subunit I C1O60_09250 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1O60_09265 PF00291 Pyridoxal-phosphate dependent enzyme C1O60_09270 PF01047 MarR family C1O60_09275 PF00210 Ferritin-like domain C1O60_09295 PF02698 DUF218 domain C1O60_09325 PF00270 DEAD/DEAH box helicase C1O60_09325 PF00271 Helicase conserved C-terminal domain C1O60_09325 PF00570 HRDC domain C1O60_09325 PF16124 RecQ zinc-binding C1O60_09325 PF09382 RQC domain C1O60_09340 PF00549 CoA-ligase C1O60_09340 PF02629 CoA binding domain C1O60_09345 PF08442 ATP-grasp domain C1O60_09345 PF00549 CoA-ligase C1O60_09390 PF02601 Exonuclease VII, large subunit C1O60_09390 PF13742 OB-fold nucleic acid binding domain C1O60_09395 PF01553 Acyltransferase C1O60_09395 PF00501 AMP-binding enzyme C1O60_09420 PF01370 NAD dependent epimerase/dehydratase family C1O60_09425 PF00672 HAMP domain C1O60_09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_09425 PF00512 His Kinase A (phospho-acceptor) domain C1O60_09430 PF00486 Transcriptional regulatory protein, C terminal C1O60_09430 PF00072 Response regulator receiver domain C1O60_09440 PF00490 Delta-aminolevulinic acid dehydratase C1O60_09455 PF03129 Anticodon binding domain C1O60_09455 PF02824 TGS domain C1O60_09455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O60_09455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1O60_09460 PF05198 Translation initiation factor IF-3, N-terminal domain C1O60_09460 PF00707 Translation initiation factor IF-3, C-terminal domain C1O60_09470 PF04235 Protein of unknown function (DUF418) C1O60_09470 PF07786 Protein of unknown function (DUF1624) C1O60_09475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1O60_09475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1O60_09475 PF13288 DXP reductoisomerase C-terminal domain C1O60_09485 PF01467 Cytidylyltransferase-like C1O60_09520 PF04991 LicD family C1O60_09525 PF01467 Cytidylyltransferase-like C1O60_09535 PF00155 Aminotransferase class I and II C1O60_09540 PF04991 LicD family C1O60_09545 PF02806 Alpha amylase, C-terminal all-beta domain C1O60_09545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1O60_09545 PF00128 Alpha amylase, catalytic domain C1O60_09555 PF02657 Fe-S metabolism associated domain C1O60_09560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1O60_09560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1O60_09565 PF00884 Sulfatase C1O60_09570 PF05524 PEP-utilising enzyme, N-terminal C1O60_09570 PF00391 PEP-utilising enzyme, mobile domain C1O60_09570 PF02896 PEP-utilising enzyme, TIM barrel domain C1O60_09575 PF00381 PTS HPr component phosphorylation site C1O60_09580 PF02603 HPr Serine kinase N terminus C1O60_09580 PF07475 HPr Serine kinase C-terminal domain C1O60_09585 PF01546 Peptidase family M20/M25/M40 C1O60_09585 PF07687 Peptidase dimerisation domain C1O60_09590 PF00005 ABC transporter C1O60_09605 PF01168 Alanine racemase, N-terminal domain C1O60_09620 PF00535 Glycosyl transferase family 2 C1O60_09635 PF07728 AAA domain (dynein-related subfamily) C1O60_09635 PF12102 Domain of unknown function (DUF3578) C1O60_09635 PF07728 AAA domain (dynein-related subfamily) C1O60_09635 PF12102 Domain of unknown function (DUF3578) C1O60_09645 PF00176 SNF2 family N-terminal domain C1O60_09645 PF00271 Helicase conserved C-terminal domain C1O60_09645 PF04434 SWIM zinc finger C1O60_09650 PF01037 Lrp/AsnC ligand binding domain C1O60_09655 PF00155 Aminotransferase class I and II C1O60_09670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O60_09670 PF03129 Anticodon binding domain C1O60_09675 PF00248 Aldo/keto reductase family C1O60_09690 PF13519 von Willebrand factor type A domain C1O60_09705 PF07726 ATPase family associated with various cellular activities (AAA) C1O60_09705 PF17863 AAA lid domain C1O60_09710 PF01425 Amidase C1O60_09715 PF02686 Glu-tRNAGln amidotransferase C subunit C1O60_09760 PF13180 PDZ domain C1O60_09765 PF13180 PDZ domain C1O60_09795 PF00155 Aminotransferase class I and II C1O60_09805 PF00248 Aldo/keto reductase family C1O60_09810 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1O60_09815 PF00248 Aldo/keto reductase family C1O60_09820 PF00149 Calcineurin-like phosphoesterase C1O60_09840 PF02525 Flavodoxin-like fold C1O60_09845 PF13411 MerR HTH family regulatory protein C1O60_09855 PF00128 Alpha amylase, catalytic domain C1O60_09855 PF09154 Domain of unknown function (DUF1939) C1O60_09865 PF01554 MatE C1O60_09875 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_09875 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_09890 PF04321 RmlD substrate binding domain C1O60_09895 PF17785 PUA-like domain C1O60_09895 PF10672 S-adenosylmethionine-dependent methyltransferase C1O60_09915 PF10672 S-adenosylmethionine-dependent methyltransferase C1O60_09915 PF17785 PUA-like domain C1O60_09920 PF02585 GlcNAc-PI de-N-acetylase C1O60_09920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1O60_09935 PF01728 FtsJ-like methyltransferase C1O60_09935 PF01479 S4 domain C1O60_09945 PF17954 Quercetinase C-terminal cupin domain C1O60_09945 PF02678 Pirin C1O60_09965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1O60_09965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1O60_09975 PF07881 L-fucose isomerase, first N-terminal domain C1O60_09975 PF07882 L-fucose isomerase, second N-terminal domain C1O60_09975 PF02952 L-fucose isomerase, C-terminal domain C1O60_09980 PF07690 Major Facilitator Superfamily C1O60_09990 PF13859 BNR repeat-like domain C1O60_09990 PF14873 N-terminal domain of BNR-repeat neuraminidase C1O60_09995 PF04542 Sigma-70 region 2 C1O60_09995 PF08281 Sigma-70, region 4 C1O60_10010 PF02583 Metal-sensitive transcriptional repressor C1O60_10015 PF00403 Heavy-metal-associated domain C1O60_10020 PF13667 ThiC-associated domain C1O60_10020 PF01964 Radical SAM ThiC family C1O60_10040 PF13180 PDZ domain C1O60_10040 PF17820 PDZ domain C1O60_10045 PF01966 HD domain C1O60_10045 PF13286 Phosphohydrolase-associated domain C1O60_10050 PF00892 EamA-like transporter family C1O60_10065 PF00842 Alanine racemase, C-terminal domain C1O60_10065 PF01168 Alanine racemase, N-terminal domain C1O60_10070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O60_10070 PF00005 ABC transporter C1O60_10075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1O60_10075 PF00005 ABC transporter C1O60_10080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1O60_10085 PF12911 N-terminal TM domain of oligopeptide transport permease C C1O60_10085 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_10090 PF00528 Binding-protein-dependent transport system inner membrane component C1O60_10105 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1O60_10105 PF02558 Ketopantoate reductase PanE/ApbA C1O60_10110 PF01268 Formate--tetrahydrofolate ligase C1O60_10115 PF06940 Domain of unknown function (DUF1287) C1O60_10120 PF02844 Phosphoribosylglycinamide synthetase, N domain C1O60_10120 PF02843 Phosphoribosylglycinamide synthetase, C domain C1O60_10120 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1O60_10125 PF00436 Single-strand binding protein family C1O60_10135 PF01618 MotA/TolQ/ExbB proton channel family C1O60_10145 PF01327 Polypeptide deformylase C1O60_10155 PF00534 Glycosyl transferases group 1 C1O60_10155 PF13439 Glycosyltransferase Family 4 C1O60_10160 PF16338 Domain of unknown function (DUF4968) C1O60_10160 PF17137 Domain of unknown function (DUF5110) C1O60_10160 PF13802 Galactose mutarotase-like C1O60_10160 PF01055 Glycosyl hydrolases family 31 C1O60_10185 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1O60_10185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1O60_10190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1O60_10205 PF01757 Acyltransferase family C1O60_10210 PF00180 Isocitrate/isopropylmalate dehydrogenase C1O60_10225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1O60_10225 PF00753 Metallo-beta-lactamase superfamily C1O60_10225 PF10996 Beta-Casp domain C1O60_10230 PF02223 Thymidylate kinase C1O60_10235 PF06508 Queuosine biosynthesis protein QueC C1O60_10240 PF14489 QueF-like protein C1O60_10245 PF00924 Mechanosensitive ion channel C1O60_10250 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1O60_10255 PF00902 Sec-independent protein translocase protein (TatC) C1O60_10260 PF02673 Bacitracin resistance protein BacA C1O60_10280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1O60_10290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1O60_10295 PF00216 Bacterial DNA-binding protein C1O60_10310 PF00175 Oxidoreductase NAD-binding domain C1O60_10310 PF00667 FAD binding domain C1O60_10310 PF00258 Flavodoxin C1O60_10315 PF00258 Flavodoxin C1O60_10315 PF00175 Oxidoreductase NAD-binding domain C1O60_10315 PF00667 FAD binding domain C1O60_10325 PF00149 Calcineurin-like phosphoesterase C1O60_10345 PF02086 D12 class N6 adenine-specific DNA methyltransferase C1O60_10350 PF02899 Phage integrase, N-terminal SAM-like domain C1O60_10350 PF00589 Phage integrase family C1O60_10370 PF00465 Iron-containing alcohol dehydrogenase C1O60_10375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1O60_10390 PF07977 FabA-like domain C1O60_10390 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1O60_10395 PF00483 Nucleotidyl transferase C1O60_10405 PF00795 Carbon-nitrogen hydrolase C1O60_10420 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1O60_10420 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_10420 PF03173 Putative carbohydrate binding domain C1O60_10420 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_10435 PF01578 Cytochrome C assembly protein C1O60_10445 PF01497 Periplasmic binding protein C1O60_10450 PF00005 ABC transporter C1O60_10455 PF01032 FecCD transport family C1O60_10460 PF01032 FecCD transport family C1O60_10495 PF01612 3'-5' exonuclease C1O60_10495 PF00476 DNA polymerase family A C1O60_10495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1O60_10495 PF01367 5'-3' exonuclease, C-terminal SAM fold C1O60_10515 PF10397 Adenylosuccinate lyase C-terminus C1O60_10515 PF00206 Lyase C1O60_10520 PF01546 Peptidase family M20/M25/M40 C1O60_10520 PF07687 Peptidase dimerisation domain C1O60_10545 PF00701 Dihydrodipicolinate synthetase family C1O60_10560 PF00425 chorismate binding enzyme C1O60_10565 PF00117 Glutamine amidotransferase class-I C1O60_10570 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1O60_10570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1O60_10585 PF04073 Aminoacyl-tRNA editing domain C1O60_10625 PF02310 B12 binding domain C1O60_10625 PF02607 B12 binding domain C1O60_10625 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1O60_10625 PF00809 Pterin binding enzyme C1O60_10625 PF02574 Homocysteine S-methyltransferase C1O60_10630 PF06738 Putative threonine/serine exporter C1O60_10635 PF06738 Putative threonine/serine exporter C1O60_10635 PF12821 Threonine/Serine exporter, ThrE C1O60_10645 PF01842 ACT domain C1O60_10645 PF00742 Homoserine dehydrogenase C1O60_10645 PF03447 Homoserine dehydrogenase, NAD binding domain C1O60_10650 PF13840 ACT domain C1O60_10650 PF01842 ACT domain C1O60_10650 PF00696 Amino acid kinase family C1O60_10660 PF09529 Integral membrane protein (intg_mem_TP0381) C1O60_10675 PF08471 Class II vitamin B12-dependent ribonucleotide reductase C1O60_10675 PF02867 Ribonucleotide reductase, barrel domain C1O60_10680 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1O60_10680 PF01488 Shikimate / quinate 5-dehydrogenase C1O60_10680 PF08501 Shikimate dehydrogenase substrate binding domain C1O60_10685 PF14815 NUDIX domain C1O60_10685 PF00730 HhH-GPD superfamily base excision DNA repair protein C1O60_10685 PF00633 Helix-hairpin-helix motif C1O60_10690 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1O60_10695 PF00391 PEP-utilising enzyme, mobile domain C1O60_10695 PF02896 PEP-utilising enzyme, TIM barrel domain C1O60_10695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1O60_10705 PF00342 Phosphoglucose isomerase C1O60_10715 PF17785 PUA-like domain C1O60_10715 PF10672 S-adenosylmethionine-dependent methyltransferase C1O60_10725 PF02310 B12 binding domain C1O60_10725 PF01642 Methylmalonyl-CoA mutase C1O60_10730 PF01642 Methylmalonyl-CoA mutase C1O60_10755 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1O60_10755 PF03807 NADP oxidoreductase coenzyme F420-dependent C1O60_10760 PF03352 Methyladenine glycosylase C1O60_10780 PF01212 Beta-eliminating lyase C1O60_10795 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1O60_10795 PF01588 Putative tRNA binding domain C1O60_10795 PF03147 Ferredoxin-fold anticodon binding domain C1O60_10795 PF03483 B3/4 domain C1O60_10795 PF03484 tRNA synthetase B5 domain C1O60_10800 PF01409 tRNA synthetases class II core domain (F) C1O60_10800 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1O60_10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1O60_10820 PF00183 Hsp90 protein C1O60_10845 PF00842 Alanine racemase, C-terminal domain C1O60_10845 PF01168 Alanine racemase, N-terminal domain C1O60_10850 PF02082 Transcriptional regulator C1O60_10855 PF01053 Cys/Met metabolism PLP-dependent enzyme C1O60_10860 PF00291 Pyridoxal-phosphate dependent enzyme C1O60_10865 PF02581 Thiamine monophosphate synthase C1O60_10870 PF02110 Hydroxyethylthiazole kinase family C1O60_10885 PF07691 PA14 domain C1O60_10885 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_10885 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_10890 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_10890 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_10890 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1O60_10890 PF03173 Putative carbohydrate binding domain C1O60_10900 PF00293 NUDIX domain C1O60_10915 PF02075 Crossover junction endodeoxyribonuclease RuvC C1O60_10920 PF00271 Helicase conserved C-terminal domain C1O60_10920 PF00270 DEAD/DEAH box helicase C1O60_10925 PF00753 Metallo-beta-lactamase superfamily C1O60_10945 PF13533 Biotin-lipoyl like C1O60_10950 PF00873 AcrB/AcrD/AcrF family C1O60_10955 PF00186 Dihydrofolate reductase C1O60_10960 PF00303 Thymidylate synthase C1O60_10965 PF13396 Phospholipase_D-nuclease N-terminal C1O60_10965 PF13091 PLD-like domain C1O60_10980 PF01554 MatE C1O60_10985 PF10609 NUBPL iron-transfer P-loop NTPase C1O60_11000 PF08502 LeuA allosteric (dimerisation) domain C1O60_11000 PF00682 HMGL-like C1O60_11005 PF01432 Peptidase family M3 C1O60_11010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1O60_11015 PF00873 AcrB/AcrD/AcrF family C1O60_11020 PF02321 Outer membrane efflux protein C1O60_11065 PF00654 Voltage gated chloride channel C1O60_11090 PF02684 Lipid-A-disaccharide synthetase C1O60_11095 PF09335 SNARE associated Golgi protein C1O60_11165 PF09827 CRISPR associated protein Cas2 C1O60_11185 PF09704 CRISPR-associated protein (Cas_Cas5) C1O60_11205 PF00171 Aldehyde dehydrogenase family C1O60_11225 PF00199 Catalase C1O60_11225 PF06628 Catalase-related immune-responsive C1O60_11225 PF18011 C-terminal domain found in long catalases C1O60_11240 PF01578 Cytochrome C assembly protein C1O60_11245 PF02915 Rubrerythrin C1O60_11250 PF13302 Acetyltransferase (GNAT) domain C1O60_11260 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1O60_11260 PF09397 Ftsk gamma domain C1O60_11260 PF17854 FtsK alpha domain C1O60_11260 PF01580 FtsK/SpoIIIE family C1O60_11275 PF02563 Polysaccharide biosynthesis/export protein C1O60_11275 PF10531 SLBB domain C1O60_11280 PF13614 AAA domain C1O60_11290 PF02397 Bacterial sugar transferase C1O60_11295 PF00535 Glycosyl transferase family 2 C1O60_11300 PF01943 Polysaccharide biosynthesis protein C1O60_11305 PF00535 Glycosyl transferase family 2 C1O60_11310 PF01501 Glycosyl transferase family 8 C1O60_11310 PF08759 Glycosyltransferase GT-D fold C1O60_11315 PF01501 Glycosyl transferase family 8 C1O60_11315 PF08759 Glycosyltransferase GT-D fold C1O60_11320 PF00535 Glycosyl transferase family 2 C1O60_11335 PF13439 Glycosyltransferase Family 4 C1O60_11340 PF13439 Glycosyltransferase Family 4 C1O60_11340 PF00534 Glycosyl transferases group 1 C1O60_11365 PF00535 Glycosyl transferase family 2 C1O60_11370 PF00132 Bacterial transferase hexapeptide (six repeats) C1O60_11390 PF01757 Acyltransferase family C1O60_11400 PF01636 Phosphotransferase enzyme family C1O60_11405 PF05025 RbsD / FucU transport protein family C1O60_11410 PF00155 Aminotransferase class I and II C1O60_11415 PF09334 tRNA synthetases class I (M) C1O60_11415 PF08264 Anticodon-binding domain of tRNA C1O60_11420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1O60_11425 PF00390 Malic enzyme, N-terminal domain C1O60_11425 PF03949 Malic enzyme, NAD binding domain C1O60_11425 PF01515 Phosphate acetyl/butaryl transferase C1O60_11435 PF00722 Glycosyl hydrolases family 16 C1O60_11440 PF00933 Glycosyl hydrolase family 3 N terminal domain C1O60_11460 PF06969 HemN C-terminal domain C1O60_11460 PF04055 Radical SAM superfamily C1O60_11495 PF02403 Seryl-tRNA synthetase N-terminal domain C1O60_11495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1O60_11500 PF08240 Alcohol dehydrogenase GroES-like domain C1O60_11500 PF00107 Zinc-binding dehydrogenase C1O60_11510 PF00795 Carbon-nitrogen hydrolase C1O60_11515 PF07726 ATPase family associated with various cellular activities (AAA) C1O60_11515 PF17863 AAA lid domain C1O60_11525 PF01195 Peptidyl-tRNA hydrolase C1O60_11530 PF00912 Transglycosylase C1O60_11530 PF00905 Penicillin binding protein transpeptidase domain C1O60_11545 PF00709 Adenylosuccinate synthetase C1O60_11565 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C1O60_11565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1O60_11570 PF00374 Nickel-dependent hydrogenase C1O60_11580 PF01750 Hydrogenase maturation protease C1O60_11585 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1O60_11610 PF00881 Nitroreductase family C1O60_11615 PF00155 Aminotransferase class I and II C1O60_11630 PF07549 SecD/SecF GG Motif C1O60_11630 PF02355 Protein export membrane protein C1O60_11660 PF01555 DNA methylase C1O60_11685 PF00728 Glycosyl hydrolase family 20, catalytic domain C1O60_11685 PF02838 Glycosyl hydrolase family 20, domain 2 C1O60_11685 PF07691 PA14 domain C1O60_11690 PF02978 Signal peptide binding domain C1O60_11690 PF00448 SRP54-type protein, GTPase domain C1O60_11690 PF02881 SRP54-type protein, helical bundle domain C1O60_11735 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1O60_11740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C1O60_11755 PF13193 AMP-binding enzyme C-terminal domain C1O60_11755 PF00501 AMP-binding enzyme C1O60_11785 PF01432 Peptidase family M3 C1O60_11795 PF05746 DALR anticodon binding domain C1O60_11795 PF03485 Arginyl tRNA synthetase N terminal domain C1O60_11795 PF00750 tRNA synthetases class I (R) C1O60_11830 PF17760 UvrA interaction domain C1O60_11830 PF00005 ABC transporter C1O60_11830 PF17755 UvrA DNA-binding domain C1O60_11835 PF02810 SEC-C motif C1O60_11835 PF07517 SecA DEAD-like domain C1O60_11835 PF01043 SecA preprotein cross-linking domain C1O60_11835 PF07516 SecA Wing and Scaffold domain C1O60_11840 PF00583 Acetyltransferase (GNAT) family C1O60_11840 PF00696 Amino acid kinase family C1O60_11850 PF00293 NUDIX domain