locus-tag class description CUB96_00010 PF01451 Low molecular weight phosphotyrosine protein phosphatase CUB96_00060 PF01636 Phosphotransferase enzyme family CUB96_00065 PF01926 50S ribosome-binding GTPase CUB96_00065 PF01018 GTP1/OBG CUB96_00085 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CUB96_00085 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CUB96_00090 PF00722 Glycosyl hydrolases family 16 CUB96_00095 PF01063 Amino-transferase class IV CUB96_00105 PF01116 Fructose-bisphosphate aldolase class-II CUB96_00110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CUB96_00110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CUB96_00115 PF01594 AI-2E family transporter CUB96_00125 PF13520 Amino acid permease CUB96_00130 PF05690 Thiazole biosynthesis protein ThiG CUB96_00140 PF12127 SigmaW regulon antibacterial CUB96_00145 PF02547 Queuosine biosynthesis protein CUB96_00155 PF00999 Sodium/hydrogen exchanger family CUB96_00155 PF02254 TrkA-N domain CUB96_00160 PF16916 Dimerisation domain of Zinc Transporter CUB96_00160 PF01545 Cation efflux family CUB96_00165 PF01709 Transcriptional regulator CUB96_00170 PF07497 Rho termination factor, RNA-binding domain CUB96_00170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUB96_00170 PF07498 Rho termination factor, N-terminal domain CUB96_00175 PF04055 Radical SAM superfamily CUB96_00185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUB96_00185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUB96_00185 PF01842 ACT domain CUB96_00200 PF00266 Aminotransferase class-V CUB96_00210 PF03601 Conserved hypothetical protein 698 CUB96_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUB96_00215 PF03466 LysR substrate binding domain CUB96_00265 PF00085 Thioredoxin CUB96_00275 PF01336 OB-fold nucleic acid binding domain CUB96_00275 PF00152 tRNA synthetases class II (D, K and N) CUB96_00290 PF17760 UvrA interaction domain CUB96_00290 PF17755 UvrA DNA-binding domain CUB96_00290 PF00005 ABC transporter CUB96_00300 PF01638 HxlR-like helix-turn-helix CUB96_00305 PF13361 UvrD-like helicase C-terminal domain CUB96_00305 PF00580 UvrD/REP helicase N-terminal domain CUB96_00310 PF00691 OmpA family CUB96_00315 PF01225 Mur ligase family, catalytic domain CUB96_00315 PF02875 Mur ligase family, glutamate ligase domain CUB96_00315 PF08245 Mur ligase middle domain CUB96_00325 PF00005 ABC transporter CUB96_00325 PF12399 Branched-chain amino acid ATP-binding cassette transporter CUB96_00340 PF00793 DAHP synthetase I family CUB96_00355 PF00889 Elongation factor TS CUB96_00365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUB96_00365 PF00005 ABC transporter CUB96_00380 PF01761 3-dehydroquinate synthase CUB96_00390 PF13180 PDZ domain CUB96_00390 PF17820 PDZ domain CUB96_00400 PF00694 Aconitase C-terminal domain CUB96_00405 PF00330 Aconitase family (aconitate hydratase) CUB96_00410 PF03099 Biotin/lipoate A/B protein ligase family CUB96_00415 PF01520 N-acetylmuramoyl-L-alanine amidase CUB96_00420 PF00154 recA bacterial DNA recombination protein CUB96_00430 PF07478 D-ala D-ala ligase C-terminus CUB96_00430 PF01820 D-ala D-ala ligase N-terminus CUB96_00435 PF08245 Mur ligase middle domain CUB96_00435 PF01225 Mur ligase family, catalytic domain CUB96_00435 PF02875 Mur ligase family, glutamate ligase domain CUB96_00440 PF03033 Glycosyltransferase family 28 N-terminal domain CUB96_00440 PF04101 Glycosyltransferase family 28 C-terminal domain CUB96_00445 PF01098 Cell cycle protein CUB96_00455 PF02875 Mur ligase family, glutamate ligase domain CUB96_00455 PF08245 Mur ligase middle domain CUB96_00460 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CUB96_00460 PF00953 Glycosyl transferase family 4 CUB96_00465 PF02875 Mur ligase family, glutamate ligase domain CUB96_00465 PF01225 Mur ligase family, catalytic domain CUB96_00465 PF08245 Mur ligase middle domain CUB96_00470 PF01225 Mur ligase family, catalytic domain CUB96_00470 PF02875 Mur ligase family, glutamate ligase domain CUB96_00470 PF08245 Mur ligase middle domain CUB96_00475 PF03793 PASTA domain CUB96_00475 PF03717 Penicillin-binding Protein dimerisation domain CUB96_00475 PF00905 Penicillin binding protein transpeptidase domain CUB96_00490 PF02381 MraZ protein, putative antitoxin-like CUB96_00495 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CUB96_00495 PF00753 Metallo-beta-lactamase superfamily CUB96_00495 PF10996 Beta-Casp domain CUB96_00500 PF03458 UPF0126 domain CUB96_00510 PF10396 GTP-binding protein TrmE N-terminus CUB96_00510 PF01926 50S ribosome-binding GTPase CUB96_00510 PF12631 MnmE helical domain CUB96_00535 PF01757 Acyltransferase family CUB96_00545 PF00534 Glycosyl transferases group 1 CUB96_00570 PF00535 Glycosyl transferase family 2 CUB96_00575 PF00535 Glycosyl transferase family 2 CUB96_00585 PF00667 FAD binding domain CUB96_00585 PF00175 Oxidoreductase NAD-binding domain CUB96_00585 PF00258 Flavodoxin CUB96_00590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CUB96_00590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CUB96_00595 PF17864 RuvB AAA lid domain CUB96_00595 PF05496 Holliday junction DNA helicase RuvB P-loop domain CUB96_00595 PF05491 RuvB C-terminal winged helix domain CUB96_00635 PF13859 BNR repeat-like domain CUB96_00645 PF00893 Small Multidrug Resistance protein CUB96_00650 PF02540 NAD synthase CUB96_00650 PF00795 Carbon-nitrogen hydrolase CUB96_00655 PF08241 Methyltransferase domain CUB96_00670 PF02142 MGS-like domain CUB96_00670 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUB96_00670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUB96_00685 PF09115 DNA polymerase III, delta subunit, C terminal CUB96_00690 PF01502 Phosphoribosyl-AMP cyclohydrolase CUB96_00705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CUB96_00710 PF03372 Endonuclease/Exonuclease/phosphatase family CUB96_00745 PF02899 Phage integrase, N-terminal SAM-like domain CUB96_00745 PF00589 Phage integrase family CUB96_00755 PF00035 Double-stranded RNA binding motif CUB96_00755 PF14622 Ribonuclease-III-like CUB96_00765 PF02463 RecF/RecN/SMC N terminal domain CUB96_00775 PF02224 Cytidylate kinase CUB96_00785 PF00586 AIR synthase related protein, N-terminal domain CUB96_00785 PF02769 AIR synthase related protein, C-terminal domain CUB96_00800 PF03793 PASTA domain CUB96_00800 PF00069 Protein kinase domain CUB96_00805 PF13167 GTP-binding GTPase N-terminal CUB96_00805 PF01926 50S ribosome-binding GTPase CUB96_00805 PF16360 GTP-binding GTPase Middle Region CUB96_00810 PF02545 Maf-like protein CUB96_00815 PF00585 C-terminal regulatory domain of Threonine dehydratase CUB96_00815 PF00291 Pyridoxal-phosphate dependent enzyme CUB96_00835 PF03734 L,D-transpeptidase catalytic domain CUB96_00840 PF01118 Semialdehyde dehydrogenase, NAD binding domain CUB96_00840 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CUB96_00870 PF00675 Insulinase (Peptidase family M16) CUB96_00870 PF05193 Peptidase M16 inactive domain CUB96_00875 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CUB96_00885 PF01612 3'-5' exonuclease CUB96_00885 PF00570 HRDC domain CUB96_00900 PF03819 MazG nucleotide pyrophosphohydrolase domain CUB96_00930 PF00884 Sulfatase CUB96_00945 PF00121 Triosephosphate isomerase CUB96_00950 PF01189 16S rRNA methyltransferase RsmB/F CUB96_00950 PF01029 NusB family CUB96_00960 PF00884 Sulfatase CUB96_00965 PF00884 Sulfatase CUB96_00965 PF16385 Domain of unknown function CUB96_00970 PF00764 Arginosuccinate synthase CUB96_00985 PF00253 Ribosomal protein S14p/S29e CUB96_00995 PF01595 Cyclin M transmembrane N-terminal domain CUB96_00995 PF03471 Transporter associated domain CUB96_00995 PF00571 CBS domain CUB96_01000 PF01351 Ribonuclease HII CUB96_01005 PF02021 Uncharacterised protein family UPF0102 CUB96_01015 PF00218 Indole-3-glycerol phosphate synthase CUB96_01040 PF00730 HhH-GPD superfamily base excision DNA repair protein CUB96_01055 PF02472 Biopolymer transport protein ExbD/TolR CUB96_01080 PF10150 Ribonuclease E/G family CUB96_01080 PF00575 S1 RNA binding domain CUB96_01100 PF05343 M42 glutamyl aminopeptidase CUB96_01120 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CUB96_01120 PF00586 AIR synthase related protein, N-terminal domain CUB96_01120 PF02769 AIR synthase related protein, C-terminal domain CUB96_01130 PF01259 SAICAR synthetase CUB96_01135 PF01272 Transcription elongation factor, GreA/GreB, C-term CUB96_01135 PF03449 Transcription elongation factor, N-terminal CUB96_01140 PF00456 Transketolase, thiamine diphosphate binding domain CUB96_01140 PF02779 Transketolase, pyrimidine binding domain CUB96_01140 PF02780 Transketolase, C-terminal domain CUB96_01150 PF00696 Amino acid kinase family CUB96_01150 PF01472 PUA domain CUB96_01155 PF00171 Aldehyde dehydrogenase family CUB96_01160 PF06426 Serine acetyltransferase, N-terminal CUB96_01160 PF00132 Bacterial transferase hexapeptide (six repeats) CUB96_01180 PF01380 SIS domain CUB96_01180 PF00571 CBS domain CUB96_01185 PF00899 ThiF family CUB96_01230 PF03717 Penicillin-binding Protein dimerisation domain CUB96_01230 PF00905 Penicillin binding protein transpeptidase domain CUB96_01240 PF00119 ATP synthase A chain CUB96_01245 PF00137 ATP synthase subunit C CUB96_01250 PF00430 ATP synthase B/B' CF(0) CUB96_01255 PF00213 ATP synthase delta (OSCP) subunit CUB96_01260 PF00306 ATP synthase alpha/beta chain, C terminal domain CUB96_01260 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUB96_01260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUB96_01265 PF00231 ATP synthase CUB96_01270 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUB96_01270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUB96_01275 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CUB96_01275 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CUB96_01295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CUB96_01305 PF00535 Glycosyl transferase family 2 CUB96_01340 PF04055 Radical SAM superfamily CUB96_01340 PF06968 Biotin and Thiamin Synthesis associated domain CUB96_01345 PF00884 Sulfatase CUB96_01360 PF01458 Uncharacterized protein family (UPF0051) CUB96_01365 PF01458 Uncharacterized protein family (UPF0051) CUB96_01370 PF00005 ABC transporter CUB96_01375 PF00005 ABC transporter CUB96_01380 PF01475 Ferric uptake regulator family CUB96_01385 PF01016 Ribosomal L27 protein CUB96_01395 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CUB96_01400 PF12146 Serine aminopeptidase, S33 CUB96_01410 PF08305 NPCBM/NEW2 domain CUB96_01425 PF03976 Polyphosphate kinase 2 (PPK2) CUB96_01460 PF03193 RsgA GTPase CUB96_01465 PF02441 Flavoprotein CUB96_01465 PF04127 DNA / pantothenate metabolism flavoprotein CUB96_01470 PF00266 Aminotransferase class-V CUB96_01475 PF00266 Aminotransferase class-V CUB96_01485 PF08220 DeoR-like helix-turn-helix domain CUB96_01485 PF00455 DeoR C terminal sensor domain CUB96_01490 PF03976 Polyphosphate kinase 2 (PPK2) CUB96_01510 PF02441 Flavoprotein CUB96_01530 PF08281 Sigma-70, region 4 CUB96_01530 PF04542 Sigma-70 region 2 CUB96_01535 PF00156 Phosphoribosyl transferase domain CUB96_01540 PF02769 AIR synthase related protein, C-terminal domain CUB96_01540 PF00586 AIR synthase related protein, N-terminal domain CUB96_01545 PF07681 DoxX CUB96_01565 PF03880 DbpA RNA binding domain CUB96_01565 PF00270 DEAD/DEAH box helicase CUB96_01565 PF00271 Helicase conserved C-terminal domain CUB96_01570 PF16385 Domain of unknown function CUB96_01570 PF00884 Sulfatase CUB96_01585 PF02347 Glycine cleavage system P-protein CUB96_01590 PF01597 Glycine cleavage H-protein CUB96_01600 PF01926 50S ribosome-binding GTPase CUB96_01600 PF06071 Protein of unknown function (DUF933) CUB96_01605 PF00768 D-alanyl-D-alanine carboxypeptidase CUB96_01605 PF07943 Penicillin-binding protein 5, C-terminal domain CUB96_01610 PF02481 DNA recombination-mediator protein A CUB96_01610 PF17782 DprA winged helix domain CUB96_01625 PF08331 Domain of unknown function (DUF1730) CUB96_01630 PF00416 Ribosomal protein S13/S18 CUB96_01635 PF00411 Ribosomal protein S11 CUB96_01640 PF00163 Ribosomal protein S4/S9 N-terminal domain CUB96_01640 PF01479 S4 domain CUB96_01665 PF00583 Acetyltransferase (GNAT) family CUB96_01670 PF02887 Pyruvate kinase, alpha/beta domain CUB96_01670 PF00224 Pyruvate kinase, barrel domain CUB96_01670 PF00391 PEP-utilising enzyme, mobile domain CUB96_01675 PF18146 Damage-inducible protein CinA KH domain CUB96_01675 PF00994 Probable molybdopterin binding domain CUB96_01675 PF02464 Competence-damaged protein CUB96_01680 PF04191 Phospholipid methyltransferase CUB96_01690 PF00772 DnaB-like helicase N terminal domain CUB96_01690 PF03796 DnaB-like helicase C terminal domain CUB96_01695 PF04055 Radical SAM superfamily CUB96_01700 PF02881 SRP54-type protein, helical bundle domain CUB96_01700 PF00448 SRP54-type protein, GTPase domain CUB96_01705 PF01029 NusB family CUB96_01715 PF00885 6,7-dimethyl-8-ribityllumazine synthase CUB96_01720 PF00925 GTP cyclohydrolase II CUB96_01720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CUB96_01725 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CUB96_01725 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUB96_01740 PF00083 Sugar (and other) transporter CUB96_01755 PF00202 Aminotransferase class-III CUB96_01760 PF01165 Ribosomal protein S21 CUB96_01770 PF00294 pfkB family carbohydrate kinase CUB96_01770 PF01467 Cytidylyltransferase-like CUB96_01775 PF13580 SIS domain CUB96_01805 PF00005 ABC transporter CUB96_01810 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_01815 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CUB96_01815 PF00132 Bacterial transferase hexapeptide (six repeats) CUB96_01825 PF02569 Pantoate-beta-alanine ligase CUB96_01830 PF00005 ABC transporter CUB96_01845 PF02457 DisA bacterial checkpoint controller nucleotide-binding CUB96_01855 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_01855 PF07691 PA14 domain CUB96_01855 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_01865 PF01138 3' exoribonuclease family, domain 1 CUB96_01865 PF03725 3' exoribonuclease family, domain 2 CUB96_01870 PF07963 Prokaryotic N-terminal methylation motif CUB96_01870 PF14245 Type IV pilin PilA CUB96_01890 PF01467 Cytidylyltransferase-like CUB96_01895 PF01416 tRNA pseudouridine synthase CUB96_01920 PF12464 Maltose acetyltransferase CUB96_01920 PF00132 Bacterial transferase hexapeptide (six repeats) CUB96_01925 PF00312 Ribosomal protein S15 CUB96_01930 PF00575 S1 RNA binding domain CUB96_01930 PF01138 3' exoribonuclease family, domain 1 CUB96_01930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CUB96_01930 PF00013 KH domain CUB96_01930 PF03725 3' exoribonuclease family, domain 2 CUB96_01940 PF01595 Cyclin M transmembrane N-terminal domain CUB96_01940 PF03471 Transporter associated domain CUB96_01940 PF00571 CBS domain CUB96_01945 PF00571 CBS domain CUB96_01945 PF03471 Transporter associated domain CUB96_01945 PF01595 Cyclin M transmembrane N-terminal domain CUB96_01970 PF02581 Thiamine monophosphate synthase CUB96_01970 PF17792 ThiD2 family CUB96_01975 PF01180 Dihydroorotate dehydrogenase CUB96_01980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CUB96_01980 PF14579 Helix-hairpin-helix motif CUB96_01980 PF02811 PHP domain CUB96_01980 PF07733 Bacterial DNA polymerase III alpha NTPase domain CUB96_01985 PF02811 PHP domain CUB96_01985 PF14579 Helix-hairpin-helix motif CUB96_01985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CUB96_01985 PF07733 Bacterial DNA polymerase III alpha NTPase domain CUB96_01985 PF01336 OB-fold nucleic acid binding domain CUB96_01995 PF00282 Pyridoxal-dependent decarboxylase conserved domain CUB96_02010 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_02010 PF07691 PA14 domain CUB96_02010 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_02020 PF00654 Voltage gated chloride channel CUB96_02045 PF00106 short chain dehydrogenase CUB96_02055 PF00005 ABC transporter CUB96_02055 PF12857 TOBE-like domain CUB96_02075 PF00005 ABC transporter CUB96_02115 PF00378 Enoyl-CoA hydratase/isomerase CUB96_02135 PF17862 AAA+ lid domain CUB96_02135 PF01434 Peptidase family M41 CUB96_02135 PF00004 ATPase family associated with various cellular activities (AAA) CUB96_02140 PF00004 ATPase family associated with various cellular activities (AAA) CUB96_02140 PF17862 AAA+ lid domain CUB96_02140 PF01434 Peptidase family M41 CUB96_02155 PF05192 MutS domain III CUB96_02155 PF05188 MutS domain II CUB96_02155 PF01624 MutS domain I CUB96_02155 PF05190 MutS family domain IV CUB96_02155 PF00488 MutS domain V CUB96_02170 PF11412 Disulphide bond corrector protein DsbC CUB96_02170 PF02683 Cytochrome C biogenesis protein transmembrane region CUB96_02215 PF12704 MacB-like periplasmic core domain CUB96_02215 PF02687 FtsX-like permease family CUB96_02215 PF00005 ABC transporter CUB96_02285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUB96_02285 PF00005 ABC transporter CUB96_02295 PF03739 Lipopolysaccharide export system permease LptF/LptG CUB96_02310 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CUB96_02310 PF02780 Transketolase, C-terminal domain CUB96_02310 PF02779 Transketolase, pyrimidine binding domain CUB96_02315 PF02609 Exonuclease VII small subunit CUB96_02325 PF00158 Sigma-54 interaction domain CUB96_02325 PF00072 Response regulator receiver domain CUB96_02325 PF02954 Bacterial regulatory protein, Fis family CUB96_02330 PF00989 PAS fold CUB96_02330 PF00512 His Kinase A (phospho-acceptor) domain CUB96_02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_02340 PF01676 Metalloenzyme superfamily CUB96_02340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CUB96_02345 PF00164 Ribosomal protein S12/S23 CUB96_02350 PF00177 Ribosomal protein S7p/S5e CUB96_02355 PF00679 Elongation factor G C-terminus CUB96_02355 PF14492 Elongation Factor G, domain II CUB96_02355 PF00009 Elongation factor Tu GTP binding domain CUB96_02355 PF03764 Elongation factor G, domain IV CUB96_02355 PF03144 Elongation factor Tu domain 2 CUB96_02360 PF00338 Ribosomal protein S10p/S20e CUB96_02365 PF00297 Ribosomal protein L3 CUB96_02370 PF00573 Ribosomal protein L4/L1 family CUB96_02375 PF00276 Ribosomal protein L23 CUB96_02380 PF00181 Ribosomal Proteins L2, RNA binding domain CUB96_02380 PF03947 Ribosomal Proteins L2, C-terminal domain CUB96_02385 PF00203 Ribosomal protein S19 CUB96_02395 PF00237 Ribosomal protein L22p/L17e CUB96_02400 PF00189 Ribosomal protein S3, C-terminal domain CUB96_02400 PF07650 KH domain CUB96_02405 PF00252 Ribosomal protein L16p/L10e CUB96_02410 PF00831 Ribosomal L29 protein CUB96_02415 PF00366 Ribosomal protein S17 CUB96_02420 PF00238 Ribosomal protein L14p/L23e CUB96_02440 PF02837 Glycosyl hydrolases family 2, sugar binding domain CUB96_02440 PF16355 Domain of unknown function (DUF4982) CUB96_02440 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CUB96_02440 PF00703 Glycosyl hydrolases family 2 CUB96_02440 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CUB96_02460 PF01618 MotA/TolQ/ExbB proton channel family CUB96_02495 PF00216 Bacterial DNA-binding protein CUB96_02500 PF11858 Domain of unknown function (DUF3378) CUB96_02500 PF01351 Ribonuclease HII CUB96_02505 PF05036 Sporulation related domain CUB96_02505 PF03330 Lytic transglycolase CUB96_02515 PF02390 Putative methyltransferase CUB96_02520 PF01702 Queuine tRNA-ribosyltransferase CUB96_02525 PF02699 Preprotein translocase subunit CUB96_02535 PF00589 Phage integrase family CUB96_02535 PF02899 Phage integrase, N-terminal SAM-like domain CUB96_02550 PF00886 Ribosomal protein S16 CUB96_02555 PF01202 Shikimate kinase CUB96_02560 PF03481 Putative GTP-binding controlling metal-binding CUB96_02560 PF01300 Telomere recombination CUB96_02565 PF01230 HIT domain CUB96_02575 PF01783 Ribosomal L32p protein family CUB96_02580 PF02504 Fatty acid synthesis protein CUB96_02585 PF07698 7TM receptor with intracellular HD hydrolase CUB96_02585 PF01966 HD domain CUB96_02585 PF07697 7TM-HD extracellular CUB96_02590 PF02130 Uncharacterized protein family UPF0054 CUB96_02590 PF07883 Cupin domain CUB96_02615 PF00578 AhpC/TSA family CUB96_02655 PF00701 Dihydrodipicolinate synthetase family CUB96_02660 PF05173 Dihydrodipicolinate reductase, C-terminus CUB96_02660 PF01113 Dihydrodipicolinate reductase, N-terminus CUB96_02665 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CUB96_02670 PF02548 Ketopantoate hydroxymethyltransferase CUB96_02720 PF00575 S1 RNA binding domain CUB96_02730 PF00472 RF-1 domain CUB96_02730 PF03462 PCRF domain CUB96_02735 PF01746 tRNA (Guanine-1)-methyltransferase CUB96_02745 PF00849 RNA pseudouridylate synthase CUB96_02745 PF01479 S4 domain CUB96_02765 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CUB96_02765 PF10996 Beta-Casp domain CUB96_02765 PF00753 Metallo-beta-lactamase superfamily CUB96_02770 PF03960 ArsC family CUB96_02775 PF00027 Cyclic nucleotide-binding domain CUB96_02775 PF00520 Ion transport protein CUB96_02780 PF00343 Carbohydrate phosphorylase CUB96_02780 PF11897 Protein of unknown function (DUF3417) CUB96_02785 PF08240 Alcohol dehydrogenase GroES-like domain CUB96_02785 PF00107 Zinc-binding dehydrogenase CUB96_02790 PF01327 Polypeptide deformylase CUB96_02865 PF08543 Phosphomethylpyrimidine kinase CUB96_02875 PF00939 Sodium:sulfate symporter transmembrane region CUB96_02885 PF00529 HlyD membrane-fusion protein of T1SS CUB96_02885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUB96_02890 PF00690 Cation transporter/ATPase, N-terminus CUB96_02890 PF00689 Cation transporting ATPase, C-terminus CUB96_02910 PF00205 Thiamine pyrophosphate enzyme, central domain CUB96_02910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUB96_02910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUB96_02915 PF02637 GatB domain CUB96_02915 PF02934 GatB/GatE catalytic domain CUB96_02925 PF00365 Phosphofructokinase CUB96_02930 PF16363 GDP-mannose 4,6 dehydratase CUB96_02935 PF00483 Nucleotidyl transferase CUB96_02945 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CUB96_02945 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CUB96_02950 PF02237 Biotin protein ligase C terminal domain CUB96_02950 PF03099 Biotin/lipoate A/B protein ligase family CUB96_02950 PF08279 HTH domain CUB96_02955 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CUB96_02960 PF02436 Conserved carboxylase domain CUB96_02960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUB96_02960 PF00682 HMGL-like CUB96_02960 PF00289 Biotin carboxylase, N-terminal domain CUB96_02960 PF00364 Biotin-requiring enzyme CUB96_02960 PF02785 Biotin carboxylase C-terminal domain CUB96_02970 PF01039 Carboxyl transferase domain CUB96_02985 PF01245 Ribosomal protein L19 CUB96_02995 PF08308 PEGA domain CUB96_02995 PF00069 Protein kinase domain CUB96_03000 PF12146 Serine aminopeptidase, S33 CUB96_03005 PF00266 Aminotransferase class-V CUB96_03020 PF01252 Signal peptidase (SPase) II CUB96_03025 PF08264 Anticodon-binding domain of tRNA CUB96_03025 PF00133 tRNA synthetases class I (I, L, M and V) CUB96_03030 PF13472 GDSL-like Lipase/Acylhydrolase family CUB96_03030 PF07859 alpha/beta hydrolase fold CUB96_03035 PF04389 Peptidase family M28 CUB96_03055 PF02687 FtsX-like permease family CUB96_03055 PF12704 MacB-like periplasmic core domain CUB96_03065 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CUB96_03065 PF00132 Bacterial transferase hexapeptide (six repeats) CUB96_03070 PF13419 Haloacid dehalogenase-like hydrolase CUB96_03075 PF02646 RmuC family CUB96_03080 PF17092 Penicillin-binding protein OB-like domain CUB96_03080 PF00905 Penicillin binding protein transpeptidase domain CUB96_03080 PF00912 Transglycosylase CUB96_03085 PF13180 PDZ domain CUB96_03110 PF00474 Sodium:solute symporter family CUB96_03135 PF00639 PPIC-type PPIASE domain CUB96_03135 PF09312 SurA N-terminal domain CUB96_03140 PF00437 Type II/IV secretion system protein CUB96_03145 PF00437 Type II/IV secretion system protein CUB96_03165 PF02470 MlaD protein CUB96_03170 PF00005 ABC transporter CUB96_03175 PF02405 Permease MlaE CUB96_03185 PF00005 ABC transporter CUB96_03185 PF00664 ABC transporter transmembrane region CUB96_03190 PF00005 ABC transporter CUB96_03190 PF00664 ABC transporter transmembrane region CUB96_03195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUB96_03195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUB96_03195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUB96_03195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUB96_03205 PF02491 SHS2 domain inserted in FTSA CUB96_03230 PF16653 Saccharopine dehydrogenase C-terminal domain CUB96_03230 PF03435 Saccharopine dehydrogenase NADP binding domain CUB96_03250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUB96_03255 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_03260 PF12911 N-terminal TM domain of oligopeptide transport permease C CUB96_03260 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_03280 PF13593 SBF-like CPA transporter family (DUF4137) CUB96_03315 PF17762 HTH domain found in ParB protein CUB96_03315 PF02195 ParB-like nuclease domain CUB96_03380 PF04023 FeoA domain CUB96_03380 PF07664 Ferrous iron transport protein B C terminus CUB96_03380 PF07670 Nucleoside recognition CUB96_03380 PF02421 Ferrous iron transport protein B CUB96_03380 PF17910 FeoB cytosolic helical domain CUB96_03390 PF00884 Sulfatase CUB96_03390 PF16385 Domain of unknown function CUB96_03395 PF01594 AI-2E family transporter CUB96_03400 PF02163 Peptidase family M50 CUB96_03400 PF17820 PDZ domain CUB96_03410 PF04371 Porphyromonas-type peptidyl-arginine deiminase CUB96_03430 PF00731 AIR carboxylase CUB96_03435 PF00156 Phosphoribosyl transferase domain CUB96_03440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUB96_03440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUB96_03445 PF01979 Amidohydrolase family CUB96_03450 PF01980 tRNA-methyltransferase O CUB96_03450 PF18389 TrmO C-terminal domain CUB96_03460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUB96_03460 PF00529 HlyD membrane-fusion protein of T1SS CUB96_03480 PF02321 Outer membrane efflux protein CUB96_03485 PF00005 ABC transporter CUB96_03485 PF02687 FtsX-like permease family CUB96_03485 PF12704 MacB-like periplasmic core domain CUB96_03490 PF12704 MacB-like periplasmic core domain CUB96_03490 PF02687 FtsX-like permease family CUB96_03490 PF00005 ABC transporter CUB96_03495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUB96_03495 PF00529 HlyD membrane-fusion protein of T1SS CUB96_03500 PF00293 NUDIX domain CUB96_03510 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CUB96_03510 PF01189 16S rRNA methyltransferase RsmB/F CUB96_03510 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CUB96_03515 PF00480 ROK family CUB96_03520 PF01258 Prokaryotic dksA/traR C4-type zinc finger CUB96_03525 PF00471 Ribosomal protein L33 CUB96_03530 PF01084 Ribosomal protein S18 CUB96_03535 PF02649 Type I GTP cyclohydrolase folE2 CUB96_03545 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CUB96_03545 PF01488 Shikimate / quinate 5-dehydrogenase CUB96_03550 PF03900 Porphobilinogen deaminase, C-terminal domain CUB96_03550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CUB96_03560 PF04343 Protein of unknown function, DUF488 CUB96_03575 PF08676 MutL C terminal dimerisation domain CUB96_03575 PF01119 DNA mismatch repair protein, C-terminal domain CUB96_03615 PF00069 Protein kinase domain CUB96_03620 PF13614 AAA domain CUB96_03630 PF00069 Protein kinase domain CUB96_03635 PF00155 Aminotransferase class I and II CUB96_03650 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CUB96_03650 PF09297 NADH pyrophosphatase zinc ribbon domain CUB96_03650 PF00293 NUDIX domain CUB96_03655 PF00294 pfkB family carbohydrate kinase CUB96_03670 PF00899 ThiF family CUB96_03680 PF13277 YmdB-like protein CUB96_03690 PF00579 tRNA synthetases class I (W and Y) CUB96_03700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CUB96_03700 PF02542 YgbB family CUB96_03715 PF00682 HMGL-like CUB96_03715 PF08502 LeuA allosteric (dimerisation) domain CUB96_03720 PF01557 Fumarylacetoacetate (FAA) hydrolase family CUB96_03755 PF17871 AAA lid domain CUB96_03755 PF07724 AAA domain (Cdc48 subfamily) CUB96_03755 PF00004 ATPase family associated with various cellular activities (AAA) CUB96_03755 PF10431 C-terminal, D2-small domain, of ClpB protein CUB96_03755 PF02861 Clp amino terminal domain, pathogenicity island component CUB96_03760 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CUB96_03765 PF02151 UvrB/uvrC motif CUB96_03775 PF00005 ABC transporter CUB96_03795 PF07555 beta-N-acetylglucosaminidase CUB96_03795 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_03810 PF17768 RecJ OB domain CUB96_03810 PF02272 DHHA1 domain CUB96_03810 PF01368 DHH family CUB96_03815 PF08502 LeuA allosteric (dimerisation) domain CUB96_03815 PF00682 HMGL-like CUB96_03820 PF08502 LeuA allosteric (dimerisation) domain CUB96_03820 PF00682 HMGL-like CUB96_03825 PF08502 LeuA allosteric (dimerisation) domain CUB96_03825 PF00682 HMGL-like CUB96_03835 PF01554 MatE CUB96_03840 PF01209 ubiE/COQ5 methyltransferase family CUB96_03860 PF01678 Diaminopimelate epimerase CUB96_03870 PF05175 Methyltransferase small domain CUB96_03870 PF17827 PrmC N-terminal domain CUB96_03875 PF03462 PCRF domain CUB96_03875 PF00472 RF-1 domain CUB96_03885 PF01235 Sodium:alanine symporter family CUB96_03900 PF04960 Glutaminase CUB96_03905 PF13520 Amino acid permease CUB96_03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUB96_03930 PF09180 Prolyl-tRNA synthetase, C-terminal CUB96_03930 PF03129 Anticodon binding domain CUB96_03950 PF01636 Phosphotransferase enzyme family CUB96_03955 PF01370 NAD dependent epimerase/dehydratase family CUB96_03965 PF16193 AAA C-terminal domain CUB96_03965 PF12002 MgsA AAA+ ATPase C terminal CUB96_03965 PF00004 ATPase family associated with various cellular activities (AAA) CUB96_03985 PF02659 Putative manganese efflux pump CUB96_04000 PF00309 Sigma-54 factor, Activator interacting domain (AID) CUB96_04000 PF04552 Sigma-54, DNA binding domain CUB96_04000 PF04963 Sigma-54 factor, core binding domain CUB96_04020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUB96_04035 PF00270 DEAD/DEAH box helicase CUB96_04035 PF00271 Helicase conserved C-terminal domain CUB96_04045 PF01066 CDP-alcohol phosphatidyltransferase CUB96_04050 PF03120 NAD-dependent DNA ligase OB-fold domain CUB96_04050 PF01653 NAD-dependent DNA ligase adenylation domain CUB96_04050 PF00533 BRCA1 C Terminus (BRCT) domain CUB96_04050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CUB96_04060 PF00800 Prephenate dehydratase CUB96_04060 PF01842 ACT domain CUB96_04060 PF01817 Chorismate mutase type II CUB96_04065 PF00849 RNA pseudouridylate synthase CUB96_04070 PF01784 NIF3 (NGG1p interacting factor 3) CUB96_04090 PF00005 ABC transporter CUB96_04095 PF11638 DnaA N-terminal domain CUB96_04095 PF00308 Bacterial dnaA protein CUB96_04095 PF08299 Bacterial dnaA protein helix-turn-helix CUB96_04100 PF00293 NUDIX domain CUB96_04115 PF00583 Acetyltransferase (GNAT) family CUB96_04115 PF00696 Amino acid kinase family CUB96_04120 PF07516 SecA Wing and Scaffold domain CUB96_04120 PF02810 SEC-C motif CUB96_04120 PF07517 SecA DEAD-like domain CUB96_04120 PF01043 SecA preprotein cross-linking domain CUB96_04165 PF03485 Arginyl tRNA synthetase N terminal domain CUB96_04165 PF05746 DALR anticodon binding domain CUB96_04165 PF00750 tRNA synthetases class I (R) CUB96_04175 PF01432 Peptidase family M3 CUB96_04210 PF13193 AMP-binding enzyme C-terminal domain CUB96_04210 PF00501 AMP-binding enzyme CUB96_04225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CUB96_04230 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CUB96_04270 PF02881 SRP54-type protein, helical bundle domain CUB96_04270 PF00448 SRP54-type protein, GTPase domain CUB96_04270 PF02978 Signal peptide binding domain CUB96_04275 PF07691 PA14 domain CUB96_04275 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_04275 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_04295 PF05683 Fumarase C-terminus CUB96_04295 PF05681 Fumarate hydratase (Fumerase) CUB96_04305 PF02355 Protein export membrane protein CUB96_04305 PF07549 SecD/SecF GG Motif CUB96_04320 PF00155 Aminotransferase class I and II CUB96_04325 PF00881 Nitroreductase family CUB96_04350 PF01750 Hydrogenase maturation protease CUB96_04360 PF00374 Nickel-dependent hydrogenase CUB96_04365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CUB96_04365 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CUB96_04385 PF00709 Adenylosuccinate synthetase CUB96_04400 PF00905 Penicillin binding protein transpeptidase domain CUB96_04400 PF00912 Transglycosylase CUB96_04405 PF00912 Transglycosylase CUB96_04415 PF01195 Peptidyl-tRNA hydrolase CUB96_04425 PF07726 ATPase family associated with various cellular activities (AAA) CUB96_04425 PF17863 AAA lid domain CUB96_04430 PF00795 Carbon-nitrogen hydrolase CUB96_04440 PF08240 Alcohol dehydrogenase GroES-like domain CUB96_04440 PF00107 Zinc-binding dehydrogenase CUB96_04445 PF02403 Seryl-tRNA synthetase N-terminal domain CUB96_04445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUB96_04455 PF04055 Radical SAM superfamily CUB96_04455 PF06969 HemN C-terminal domain CUB96_04475 PF00933 Glycosyl hydrolase family 3 N terminal domain CUB96_04480 PF00722 Glycosyl hydrolases family 16 CUB96_04490 PF03949 Malic enzyme, NAD binding domain CUB96_04490 PF00390 Malic enzyme, N-terminal domain CUB96_04490 PF01515 Phosphate acetyl/butaryl transferase CUB96_04505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUB96_04510 PF08264 Anticodon-binding domain of tRNA CUB96_04510 PF09334 tRNA synthetases class I (M) CUB96_04510 PF01588 Putative tRNA binding domain CUB96_04515 PF00155 Aminotransferase class I and II CUB96_04520 PF05025 RbsD / FucU transport protein family CUB96_04525 PF01636 Phosphotransferase enzyme family CUB96_04540 PF01757 Acyltransferase family CUB96_04565 PF00535 Glycosyl transferase family 2 CUB96_04575 PF00132 Bacterial transferase hexapeptide (six repeats) CUB96_04585 PF13439 Glycosyltransferase Family 4 CUB96_04585 PF00534 Glycosyl transferases group 1 CUB96_04615 PF13439 Glycosyltransferase Family 4 CUB96_04620 PF13439 Glycosyltransferase Family 4 CUB96_04625 PF13439 Glycosyltransferase Family 4 CUB96_04625 PF00534 Glycosyl transferases group 1 CUB96_04630 PF00535 Glycosyl transferase family 2 CUB96_04635 PF02397 Bacterial sugar transferase CUB96_04645 PF13614 AAA domain CUB96_04650 PF10531 SLBB domain CUB96_04650 PF02563 Polysaccharide biosynthesis/export protein CUB96_04655 PF01580 FtsK/SpoIIIE family CUB96_04655 PF09397 Ftsk gamma domain CUB96_04655 PF17854 FtsK alpha domain CUB96_04665 PF13302 Acetyltransferase (GNAT) domain CUB96_04675 PF02915 Rubrerythrin CUB96_04680 PF01578 Cytochrome C assembly protein CUB96_04695 PF00199 Catalase CUB96_04695 PF18011 C-terminal domain found in long catalases CUB96_04695 PF06628 Catalase-related immune-responsive CUB96_04715 PF00171 Aldehyde dehydrogenase family CUB96_04795 PF09335 SNARE associated Golgi protein CUB96_04800 PF02684 Lipid-A-disaccharide synthetase CUB96_04805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CUB96_04805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CUB96_04825 PF00654 Voltage gated chloride channel CUB96_04850 PF02321 Outer membrane efflux protein CUB96_04855 PF00873 AcrB/AcrD/AcrF family CUB96_04860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUB96_04865 PF01432 Peptidase family M3 CUB96_04870 PF00682 HMGL-like CUB96_04870 PF08502 LeuA allosteric (dimerisation) domain CUB96_04885 PF10609 NUBPL iron-transfer P-loop NTPase CUB96_04885 PF01883 Iron-sulfur cluster assembly protein CUB96_04890 PF01554 MatE CUB96_04905 PF13396 Phospholipase_D-nuclease N-terminal CUB96_04905 PF13091 PLD-like domain CUB96_04910 PF00303 Thymidylate synthase CUB96_04915 PF00186 Dihydrofolate reductase CUB96_04920 PF00873 AcrB/AcrD/AcrF family CUB96_04925 PF13533 Biotin-lipoyl like CUB96_04945 PF00753 Metallo-beta-lactamase superfamily CUB96_04950 PF00270 DEAD/DEAH box helicase CUB96_04950 PF00271 Helicase conserved C-terminal domain CUB96_04955 PF02075 Crossover junction endodeoxyribonuclease RuvC CUB96_04970 PF00293 NUDIX domain CUB96_04980 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_04980 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_04985 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_04985 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_05005 PF02581 Thiamine monophosphate synthase CUB96_05010 PF00291 Pyridoxal-phosphate dependent enzyme CUB96_05015 PF01053 Cys/Met metabolism PLP-dependent enzyme CUB96_05020 PF02082 Transcriptional regulator CUB96_05025 PF01168 Alanine racemase, N-terminal domain CUB96_05025 PF00842 Alanine racemase, C-terminal domain CUB96_05045 PF09827 CRISPR associated protein Cas2 CUB96_05065 PF07885 Ion channel CUB96_05070 PF00183 Hsp90 protein CUB96_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_05095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CUB96_05095 PF01409 tRNA synthetases class II core domain (F) CUB96_05100 PF03483 B3/4 domain CUB96_05100 PF03484 tRNA synthetase B5 domain CUB96_05100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CUB96_05100 PF03147 Ferredoxin-fold anticodon binding domain CUB96_05100 PF01588 Putative tRNA binding domain CUB96_05105 PF03147 Ferredoxin-fold anticodon binding domain CUB96_05105 PF03483 B3/4 domain CUB96_05105 PF03484 tRNA synthetase B5 domain CUB96_05105 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CUB96_05105 PF01588 Putative tRNA binding domain CUB96_05110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CUB96_05110 PF03483 B3/4 domain CUB96_05110 PF03484 tRNA synthetase B5 domain CUB96_05110 PF03147 Ferredoxin-fold anticodon binding domain CUB96_05110 PF01588 Putative tRNA binding domain CUB96_05115 PF03483 B3/4 domain CUB96_05115 PF03484 tRNA synthetase B5 domain CUB96_05115 PF03147 Ferredoxin-fold anticodon binding domain CUB96_05115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CUB96_05115 PF01588 Putative tRNA binding domain CUB96_05130 PF01212 Beta-eliminating lyase CUB96_05150 PF03352 Methyladenine glycosylase CUB96_05155 PF03807 NADP oxidoreductase coenzyme F420-dependent CUB96_05155 PF14748 Pyrroline-5-carboxylate reductase dimerisation CUB96_05180 PF01642 Methylmalonyl-CoA mutase CUB96_05185 PF02310 B12 binding domain CUB96_05185 PF01642 Methylmalonyl-CoA mutase CUB96_05205 PF10672 S-adenosylmethionine-dependent methyltransferase CUB96_05205 PF17785 PUA-like domain CUB96_05215 PF00342 Phosphoglucose isomerase CUB96_05225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CUB96_05225 PF02896 PEP-utilising enzyme, TIM barrel domain CUB96_05225 PF00391 PEP-utilising enzyme, mobile domain CUB96_05230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CUB96_05235 PF00730 HhH-GPD superfamily base excision DNA repair protein CUB96_05235 PF14815 NUDIX domain CUB96_05240 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CUB96_05240 PF01488 Shikimate / quinate 5-dehydrogenase CUB96_05240 PF08501 Shikimate dehydrogenase substrate binding domain CUB96_05265 PF09529 Integral membrane protein (intg_mem_TP0381) CUB96_05285 PF01842 ACT domain CUB96_05285 PF00742 Homoserine dehydrogenase CUB96_05285 PF03447 Homoserine dehydrogenase, NAD binding domain CUB96_05295 PF12821 Threonine/Serine exporter, ThrE CUB96_05295 PF06738 Putative threonine/serine exporter CUB96_05300 PF06738 Putative threonine/serine exporter CUB96_05340 PF04073 Aminoacyl-tRNA editing domain CUB96_05345 PF00117 Glutamine amidotransferase class-I CUB96_05345 PF00958 GMP synthase C terminal domain CUB96_05345 PF02540 NAD synthase CUB96_05360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUB96_05360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUB96_05365 PF00117 Glutamine amidotransferase class-I CUB96_05370 PF00425 chorismate binding enzyme CUB96_05385 PF00701 Dihydrodipicolinate synthetase family CUB96_05410 PF07687 Peptidase dimerisation domain CUB96_05410 PF01546 Peptidase family M20/M25/M40 CUB96_05415 PF00206 Lyase CUB96_05415 PF10397 Adenylosuccinate lyase C-terminus CUB96_05435 PF01367 5'-3' exonuclease, C-terminal SAM fold CUB96_05435 PF01612 3'-5' exonuclease CUB96_05435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CUB96_05435 PF00476 DNA polymerase family A CUB96_05470 PF01032 FecCD transport family CUB96_05475 PF01032 FecCD transport family CUB96_05480 PF00005 ABC transporter CUB96_05485 PF01497 Periplasmic binding protein CUB96_05495 PF01578 Cytochrome C assembly protein CUB96_05510 PF03173 Putative carbohydrate binding domain CUB96_05510 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CUB96_05510 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_05510 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_05525 PF00795 Carbon-nitrogen hydrolase CUB96_05535 PF00483 Nucleotidyl transferase CUB96_05540 PF07977 FabA-like domain CUB96_05540 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CUB96_05555 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CUB96_05560 PF12161 HsdM N-terminal domain CUB96_05560 PF02384 N-6 DNA Methylase CUB96_05570 PF18766 SWI2/SNF2 ATPase CUB96_05570 PF12008 Type I restriction and modification enzyme - subunit R C terminal CUB96_05570 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CUB96_05580 PF00465 Iron-containing alcohol dehydrogenase CUB96_05605 PF00589 Phage integrase family CUB96_05605 PF02899 Phage integrase, N-terminal SAM-like domain CUB96_05610 PF02086 D12 class N6 adenine-specific DNA methyltransferase CUB96_05630 PF00149 Calcineurin-like phosphoesterase CUB96_05640 PF00175 Oxidoreductase NAD-binding domain CUB96_05640 PF00667 FAD binding domain CUB96_05640 PF00258 Flavodoxin CUB96_05650 PF01264 Chorismate synthase CUB96_05655 PF00216 Bacterial DNA-binding protein CUB96_05660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUB96_05670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUB96_05690 PF02673 Bacitracin resistance protein BacA CUB96_05695 PF00902 Sec-independent protein translocase protein (TatC) CUB96_05700 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUB96_05705 PF00924 Mechanosensitive ion channel CUB96_05710 PF14489 QueF-like protein CUB96_05715 PF06508 Queuosine biosynthesis protein QueC CUB96_05720 PF02223 Thymidylate kinase CUB96_05725 PF02223 Thymidylate kinase CUB96_05735 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CUB96_05735 PF10996 Beta-Casp domain CUB96_05735 PF00753 Metallo-beta-lactamase superfamily CUB96_05755 PF00180 Isocitrate/isopropylmalate dehydrogenase CUB96_05760 PF01757 Acyltransferase family CUB96_05775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CUB96_05785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CUB96_05785 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CUB96_05805 PF16338 Domain of unknown function (DUF4968) CUB96_05805 PF17137 Domain of unknown function (DUF5110) CUB96_05805 PF01055 Glycosyl hydrolases family 31 CUB96_05805 PF13802 Galactose mutarotase-like CUB96_05810 PF00534 Glycosyl transferases group 1 CUB96_05810 PF13439 Glycosyltransferase Family 4 CUB96_05820 PF01327 Polypeptide deformylase CUB96_05830 PF01618 MotA/TolQ/ExbB proton channel family CUB96_05840 PF00436 Single-strand binding protein family CUB96_05845 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CUB96_05845 PF02844 Phosphoribosylglycinamide synthetase, N domain CUB96_05845 PF02843 Phosphoribosylglycinamide synthetase, C domain CUB96_05850 PF06940 Domain of unknown function (DUF1287) CUB96_05855 PF01268 Formate--tetrahydrofolate ligase CUB96_05860 PF08546 Ketopantoate reductase PanE/ApbA C terminal CUB96_05860 PF02558 Ketopantoate reductase PanE/ApbA CUB96_05880 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_05885 PF12911 N-terminal TM domain of oligopeptide transport permease C CUB96_05885 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_05895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUB96_05900 PF00005 ABC transporter CUB96_05900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUB96_05905 PF00005 ABC transporter CUB96_05905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUB96_05910 PF01168 Alanine racemase, N-terminal domain CUB96_05910 PF00842 Alanine racemase, C-terminal domain CUB96_05925 PF00892 EamA-like transporter family CUB96_05935 PF01966 HD domain CUB96_05935 PF13286 Phosphohydrolase-associated domain CUB96_05955 PF17820 PDZ domain CUB96_05955 PF13180 PDZ domain CUB96_05975 PF13667 ThiC-associated domain CUB96_05975 PF01964 Radical SAM ThiC family CUB96_05980 PF00403 Heavy-metal-associated domain CUB96_05985 PF02583 Metal-sensitive transcriptional repressor CUB96_06000 PF08281 Sigma-70, region 4 CUB96_06000 PF04542 Sigma-70 region 2 CUB96_06005 PF13859 BNR repeat-like domain CUB96_06005 PF14873 N-terminal domain of BNR-repeat neuraminidase CUB96_06015 PF07690 Major Facilitator Superfamily CUB96_06025 PF07882 L-fucose isomerase, second N-terminal domain CUB96_06025 PF07881 L-fucose isomerase, first N-terminal domain CUB96_06025 PF02952 L-fucose isomerase, C-terminal domain CUB96_06035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CUB96_06035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CUB96_06085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CUB96_06085 PF02585 GlcNAc-PI de-N-acetylase CUB96_06090 PF17785 PUA-like domain CUB96_06090 PF10672 S-adenosylmethionine-dependent methyltransferase CUB96_06110 PF17785 PUA-like domain CUB96_06110 PF10672 S-adenosylmethionine-dependent methyltransferase CUB96_06115 PF04321 RmlD substrate binding domain CUB96_06125 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_06125 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_06135 PF01554 MatE CUB96_06145 PF09154 Domain of unknown function (DUF1939) CUB96_06145 PF00128 Alpha amylase, catalytic domain CUB96_06155 PF13411 MerR HTH family regulatory protein CUB96_06160 PF02525 Flavodoxin-like fold CUB96_06170 PF00248 Aldo/keto reductase family CUB96_06190 PF00149 Calcineurin-like phosphoesterase CUB96_06195 PF00248 Aldo/keto reductase family CUB96_06200 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CUB96_06205 PF00248 Aldo/keto reductase family CUB96_06215 PF00155 Aminotransferase class I and II CUB96_06245 PF01757 Acyltransferase family CUB96_06260 PF13180 PDZ domain CUB96_06265 PF13180 PDZ domain CUB96_06305 PF02686 Glu-tRNAGln amidotransferase C subunit CUB96_06310 PF01425 Amidase CUB96_06315 PF07726 ATPase family associated with various cellular activities (AAA) CUB96_06315 PF17863 AAA lid domain CUB96_06330 PF13519 von Willebrand factor type A domain CUB96_06350 PF00248 Aldo/keto reductase family CUB96_06355 PF03129 Anticodon binding domain CUB96_06355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUB96_06370 PF00155 Aminotransferase class I and II CUB96_06375 PF01037 Lrp/AsnC ligand binding domain CUB96_06385 PF04379 ApaG domain CUB96_06410 PF01168 Alanine racemase, N-terminal domain CUB96_06425 PF00005 ABC transporter CUB96_06430 PF01546 Peptidase family M20/M25/M40 CUB96_06430 PF07687 Peptidase dimerisation domain CUB96_06435 PF02603 HPr Serine kinase N terminus CUB96_06435 PF07475 HPr Serine kinase C-terminal domain CUB96_06440 PF00381 PTS HPr component phosphorylation site CUB96_06445 PF02896 PEP-utilising enzyme, TIM barrel domain CUB96_06445 PF05524 PEP-utilising enzyme, N-terminal CUB96_06445 PF00391 PEP-utilising enzyme, mobile domain CUB96_06450 PF00884 Sulfatase CUB96_06455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUB96_06455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUB96_06460 PF02657 Fe-S metabolism associated domain CUB96_06470 PF00128 Alpha amylase, catalytic domain CUB96_06470 PF02806 Alpha amylase, C-terminal all-beta domain CUB96_06470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CUB96_06475 PF04991 LicD family CUB96_06485 PF00155 Aminotransferase class I and II CUB96_06495 PF01467 Cytidylyltransferase-like CUB96_06500 PF04991 LicD family CUB96_06515 PF13649 Methyltransferase domain CUB96_06520 PF01704 UTP--glucose-1-phosphate uridylyltransferase CUB96_06540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CUB96_06540 PF13288 DXP reductoisomerase C-terminal domain CUB96_06540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CUB96_06545 PF07786 Protein of unknown function (DUF1624) CUB96_06545 PF04235 Protein of unknown function (DUF418) CUB96_06555 PF00707 Translation initiation factor IF-3, C-terminal domain CUB96_06555 PF05198 Translation initiation factor IF-3, N-terminal domain CUB96_06560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUB96_06560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUB96_06560 PF02824 TGS domain CUB96_06560 PF03129 Anticodon binding domain CUB96_06575 PF00490 Delta-aminolevulinic acid dehydratase CUB96_06585 PF00072 Response regulator receiver domain CUB96_06585 PF00486 Transcriptional regulatory protein, C terminal CUB96_06590 PF00072 Response regulator receiver domain CUB96_06590 PF00486 Transcriptional regulatory protein, C terminal CUB96_06595 PF00672 HAMP domain CUB96_06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_06595 PF00512 His Kinase A (phospho-acceptor) domain CUB96_06600 PF01370 NAD dependent epimerase/dehydratase family CUB96_06635 PF01553 Acyltransferase CUB96_06635 PF00501 AMP-binding enzyme CUB96_06640 PF02601 Exonuclease VII, large subunit CUB96_06640 PF13742 OB-fold nucleic acid binding domain CUB96_06675 PF08442 ATP-grasp domain CUB96_06675 PF00549 CoA-ligase CUB96_06680 PF00549 CoA-ligase CUB96_06680 PF02629 CoA binding domain CUB96_06695 PF16124 RecQ zinc-binding CUB96_06695 PF00570 HRDC domain CUB96_06695 PF00271 Helicase conserved C-terminal domain CUB96_06695 PF00270 DEAD/DEAH box helicase CUB96_06695 PF09382 RQC domain CUB96_06730 PF02698 DUF218 domain CUB96_06750 PF00210 Ferritin-like domain CUB96_06755 PF01047 MarR family CUB96_06760 PF00291 Pyridoxal-phosphate dependent enzyme CUB96_06775 PF01451 Low molecular weight phosphotyrosine protein phosphatase CUB96_06785 PF01654 Cytochrome bd terminal oxidase subunit I CUB96_06790 PF02322 Cytochrome bd terminal oxidase subunit II CUB96_06795 PF16078 2-oxoglutarate dehydrogenase N-terminus CUB96_06795 PF02779 Transketolase, pyrimidine binding domain CUB96_06795 PF00676 Dehydrogenase E1 component CUB96_06795 PF16870 2-oxoglutarate dehydrogenase C-terminal CUB96_06800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CUB96_06800 PF02817 e3 binding domain CUB96_06800 PF00364 Biotin-requiring enzyme CUB96_06815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUB96_06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUB96_06820 PF01979 Amidohydrolase family CUB96_06830 PF01301 Glycosyl hydrolases family 35 CUB96_06840 PF00593 TonB dependent receptor CUB96_06840 PF07715 TonB-dependent Receptor Plug Domain CUB96_06855 PF03186 CobD/Cbib protein CUB96_06860 PF02277 Phosphoribosyltransferase CUB96_06875 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CUB96_06885 PF07669 Eco57I restriction-modification methylase CUB96_06910 PF00365 Phosphofructokinase CUB96_06930 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_06930 PF07691 PA14 domain CUB96_06930 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_06935 PF12002 MgsA AAA+ ATPase C terminal CUB96_06935 PF16193 AAA C-terminal domain CUB96_06935 PF00004 ATPase family associated with various cellular activities (AAA) CUB96_06940 PF02837 Glycosyl hydrolases family 2, sugar binding domain CUB96_06940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CUB96_06940 PF00703 Glycosyl hydrolases family 2 CUB96_06945 PF16353 Domain of unknown function(DUF4981) CUB96_06945 PF00703 Glycosyl hydrolases family 2 CUB96_06945 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CUB96_06945 PF02837 Glycosyl hydrolases family 2, sugar binding domain CUB96_06945 PF02929 Beta galactosidase small chain CUB96_06990 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CUB96_07000 PF00884 Sulfatase CUB96_07010 PF00834 Ribulose-phosphate 3 epimerase family CUB96_07015 PF02666 Phosphatidylserine decarboxylase CUB96_07025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUB96_07025 PF00205 Thiamine pyrophosphate enzyme, central domain CUB96_07025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUB96_07030 PF13419 Haloacid dehalogenase-like hydrolase CUB96_07035 PF01649 Ribosomal protein S20 CUB96_07045 PF02401 LytB protein CUB96_07050 PF01207 Dihydrouridine synthase (Dus) CUB96_07070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CUB96_07070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CUB96_07085 PF03958 Bacterial type II/III secretion system short domain CUB96_07085 PF00263 Bacterial type II and III secretion system protein CUB96_07095 PF12627 Probable RNA and SrmB- binding site of polymerase A CUB96_07095 PF13735 tRNA nucleotidyltransferase domain 2 putative CUB96_07095 PF01743 Poly A polymerase head domain CUB96_07115 PF08482 ATP-dependent helicase C-terminal CUB96_07115 PF00271 Helicase conserved C-terminal domain CUB96_07115 PF04408 Helicase associated domain (HA2) CUB96_07115 PF00270 DEAD/DEAH box helicase CUB96_07130 PF17804 Tail specific protease N-terminal domain CUB96_07130 PF03572 Peptidase family S41 CUB96_07130 PF00595 PDZ domain CUB96_07130 PF11818 C-terminal domain of tail specific protease (DUF3340) CUB96_07135 PF00464 Serine hydroxymethyltransferase CUB96_07150 PF01427 D-ala-D-ala dipeptidase CUB96_07155 PF04539 Sigma-70 region 3 CUB96_07155 PF00140 Sigma-70 factor, region 1.2 CUB96_07155 PF04542 Sigma-70 region 2 CUB96_07155 PF03979 Sigma-70 factor, region 1.1 CUB96_07155 PF04545 Sigma-70, region 4 CUB96_07160 PF10410 DnaB-helicase binding domain of primase CUB96_07160 PF01807 CHC2 zinc finger CUB96_07160 PF08275 DNA primase catalytic core, N-terminal domain CUB96_07165 PF01957 NfeD-like C-terminal, partner-binding CUB96_07165 PF01972 Serine dehydrogenase proteinase CUB96_07170 PF00919 Uncharacterized protein family UPF0004 CUB96_07170 PF18693 TRAM domain CUB96_07170 PF04055 Radical SAM superfamily CUB96_07185 PF02446 4-alpha-glucanotransferase CUB96_07190 PF03797 Autotransporter beta-domain CUB96_07190 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat CUB96_07190 PF07548 Chlamydia polymorphic membrane protein middle domain CUB96_07210 PF00677 Lumazine binding domain CUB96_07225 PF01522 Polysaccharide deacetylase CUB96_07250 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CUB96_07250 PF01568 Molydopterin dinucleotide binding domain CUB96_07250 PF00384 Molybdopterin oxidoreductase CUB96_07250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CUB96_07255 PF00146 NADH dehydrogenase CUB96_07265 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CUB96_07270 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CUB96_07275 PF00361 Proton-conducting membrane transporter CUB96_07275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CUB96_07285 PF00361 Proton-conducting membrane transporter CUB96_07290 PF00361 Proton-conducting membrane transporter CUB96_07315 PF00854 POT family CUB96_07320 PF00348 Polyprenyl synthetase CUB96_07325 PF01969 Protein of unknown function DUF111 CUB96_07330 PF11734 TilS substrate C-terminal domain CUB96_07330 PF09179 TilS substrate binding domain CUB96_07330 PF01171 PP-loop family CUB96_07335 PF00731 AIR carboxylase CUB96_07340 PF02638 Glycosyl hydrolase-like 10 CUB96_07345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CUB96_07345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CUB96_07355 PF03023 Lipid II flippase MurJ CUB96_07360 PF00155 Aminotransferase class I and II CUB96_07370 PF01207 Dihydrouridine synthase (Dus) CUB96_07375 PF00437 Type II/IV secretion system protein CUB96_07380 PF00437 Type II/IV secretion system protein CUB96_07385 PF00482 Type II secretion system (T2SS), protein F CUB96_07395 PF00535 Glycosyl transferase family 2 CUB96_07400 PF00535 Glycosyl transferase family 2 CUB96_07405 PF00334 Nucleoside diphosphate kinase CUB96_07415 PF00849 RNA pseudouridylate synthase CUB96_07425 PF01668 SmpB protein CUB96_07435 PF00588 SpoU rRNA Methylase family CUB96_07440 PF00285 Citrate synthase, C-terminal domain CUB96_07465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CUB96_07465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CUB96_07475 PF00465 Iron-containing alcohol dehydrogenase CUB96_07480 PF01835 MG2 domain CUB96_07480 PF07678 A-macroglobulin TED domain CUB96_07480 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CUB96_07480 PF00207 Alpha-2-macroglobulin family CUB96_07480 PF07703 Alpha-2-macroglobulin bait region domain CUB96_07490 PF06044 Dam-replacing family CUB96_07490 PF17726 Dam-replacing HTH domain CUB96_07495 PF00892 EamA-like transporter family CUB96_07510 PF13361 UvrD-like helicase C-terminal domain CUB96_07510 PF12705 PD-(D/E)XK nuclease superfamily CUB96_07510 PF00580 UvrD/REP helicase N-terminal domain CUB96_07525 PF02163 Peptidase family M50 CUB96_07525 PF17820 PDZ domain CUB96_07530 PF00453 Ribosomal protein L20 CUB96_07535 PF01632 Ribosomal protein L35 CUB96_07540 PF02151 UvrB/uvrC motif CUB96_07540 PF17757 UvrB interaction domain CUB96_07540 PF12344 Ultra-violet resistance protein B CUB96_07540 PF04851 Type III restriction enzyme, res subunit CUB96_07540 PF00271 Helicase conserved C-terminal domain CUB96_07560 PF07690 Major Facilitator Superfamily CUB96_07565 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CUB96_07600 PF01228 Glycine radical CUB96_07600 PF02901 Pyruvate formate lyase-like CUB96_07605 PF04055 Radical SAM superfamily CUB96_07615 PF00444 Ribosomal protein L36 CUB96_07620 PF00561 alpha/beta hydrolase fold CUB96_07640 PF00290 Tryptophan synthase alpha chain CUB96_07655 PF00218 Indole-3-glycerol phosphate synthase CUB96_07665 PF04715 Anthranilate synthase component I, N terminal region CUB96_07665 PF00425 chorismate binding enzyme CUB96_07685 PF00248 Aldo/keto reductase family CUB96_07715 PF08774 VRR-NUC domain CUB96_07715 PF04851 Type III restriction enzyme, res subunit CUB96_07720 PF18273 Type III R-M EcoP15I C-terminal domain CUB96_07720 PF01555 DNA methylase CUB96_07730 PF00271 Helicase conserved C-terminal domain CUB96_07730 PF00176 SNF2 family N-terminal domain CUB96_07765 PF00691 OmpA family CUB96_07780 PF13419 Haloacid dehalogenase-like hydrolase CUB96_07790 PF00698 Acyl transferase domain CUB96_07795 PF01196 Ribosomal protein L17 CUB96_07800 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CUB96_07800 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CUB96_07800 PF01000 RNA polymerase Rpb3/RpoA insert domain CUB96_07810 PF01478 Type IV leader peptidase family CUB96_07810 PF06750 Bacterial Peptidase A24 N-terminal domain CUB96_07820 PF02355 Protein export membrane protein CUB96_07820 PF07549 SecD/SecF GG Motif CUB96_07825 PF01522 Polysaccharide deacetylase CUB96_07825 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CUB96_07860 PF01040 UbiA prenyltransferase family CUB96_07875 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUB96_07880 PF02080 TrkA-C domain CUB96_07880 PF03600 Citrate transporter CUB96_07885 PF00625 Guanylate kinase CUB96_07890 PF03755 YicC-like family, N-terminal region CUB96_07890 PF08340 Domain of unknown function (DUF1732) CUB96_07895 PF00155 Aminotransferase class I and II CUB96_07915 PF02535 ZIP Zinc transporter CUB96_07925 PF00365 Phosphofructokinase CUB96_07930 PF07943 Penicillin-binding protein 5, C-terminal domain CUB96_07930 PF00768 D-alanyl-D-alanine carboxypeptidase CUB96_07945 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CUB96_07950 PF01250 Ribosomal protein S6 CUB96_07955 PF00117 Glutamine amidotransferase class-I CUB96_07960 PF00475 Imidazoleglycerol-phosphate dehydratase CUB96_07975 PF14693 Ribosomal protein TL5, C-terminal domain CUB96_07975 PF01386 Ribosomal L25p family CUB96_07980 PF14572 Phosphoribosyl synthetase-associated domain CUB96_07980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CUB96_08005 PF01565 FAD binding domain CUB96_08005 PF02913 FAD linked oxidases, C-terminal domain CUB96_08010 PF10502 Signal peptidase, peptidase S26 CUB96_08020 PF13229 Right handed beta helix region CUB96_08030 PF04452 RNA methyltransferase CUB96_08035 PF00226 DnaJ domain CUB96_08035 PF00684 DnaJ central domain CUB96_08035 PF01556 DnaJ C terminal domain CUB96_08045 PF02594 Uncharacterised ACR, YggU family COG1872 CUB96_08050 PF00977 Histidine biosynthesis protein CUB96_08075 PF17760 UvrA interaction domain CUB96_08075 PF00005 ABC transporter CUB96_08075 PF17755 UvrA DNA-binding domain CUB96_08095 PF01960 ArgJ family CUB96_08100 PF02774 Semialdehyde dehydrogenase, dimerisation domain CUB96_08100 PF01118 Semialdehyde dehydrogenase, NAD binding domain CUB96_08110 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_08115 PF00005 ABC transporter CUB96_08135 PF01479 S4 domain CUB96_08135 PF00849 RNA pseudouridylate synthase CUB96_08140 PF00849 RNA pseudouridylate synthase CUB96_08145 PF00881 Nitroreductase family CUB96_08170 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CUB96_08170 PF00056 lactate/malate dehydrogenase, NAD binding domain CUB96_08175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CUB96_08175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CUB96_08175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CUB96_08210 PF01197 Ribosomal protein L31 CUB96_08215 PF11734 TilS substrate C-terminal domain CUB96_08215 PF01171 PP-loop family CUB96_08220 PF01515 Phosphate acetyl/butaryl transferase CUB96_08220 PF07085 DRTGG domain CUB96_08225 PF02811 PHP domain CUB96_08240 PF07690 Major Facilitator Superfamily CUB96_08250 PF17757 UvrB interaction domain CUB96_08250 PF00271 Helicase conserved C-terminal domain CUB96_08250 PF00270 DEAD/DEAH box helicase CUB96_08250 PF03461 TRCF domain CUB96_08250 PF02559 CarD-like/TRCF domain CUB96_08255 PF03461 TRCF domain CUB96_08255 PF17757 UvrB interaction domain CUB96_08255 PF00271 Helicase conserved C-terminal domain CUB96_08255 PF00270 DEAD/DEAH box helicase CUB96_08255 PF02559 CarD-like/TRCF domain CUB96_08260 PF03793 PASTA domain CUB96_08260 PF00069 Protein kinase domain CUB96_08265 PF14508 Glycosyl-hydrolase 97 N-terminal CUB96_08265 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CUB96_08265 PF10566 Glycoside hydrolase 97 CUB96_08280 PF00162 Phosphoglycerate kinase CUB96_08285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CUB96_08285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUB96_08290 PF01330 RuvA N terminal domain CUB96_08290 PF07499 RuvA, C-terminal domain CUB96_08305 PF02706 Chain length determinant protein CUB96_08305 PF13807 G-rich domain on putative tyrosine kinase CUB96_08305 PF13614 AAA domain CUB96_08310 PF02706 Chain length determinant protein CUB96_08350 PF00118 TCP-1/cpn60 chaperonin family CUB96_08355 PF00166 Chaperonin 10 Kd subunit CUB96_08360 PF00012 Hsp70 protein CUB96_08365 PF00534 Glycosyl transferases group 1 CUB96_08365 PF13439 Glycosyltransferase Family 4 CUB96_08385 PF00586 AIR synthase related protein, N-terminal domain CUB96_08385 PF02769 AIR synthase related protein, C-terminal domain CUB96_08390 PF01924 Hydrogenase formation hypA family CUB96_08395 PF01455 HupF/HypC family CUB96_08400 PF07503 HypF finger CUB96_08400 PF01300 Telomere recombination CUB96_08400 PF17788 HypF Kae1-like domain CUB96_08400 PF00708 Acylphosphatase CUB96_08405 PF02492 CobW/HypB/UreG, nucleotide-binding domain CUB96_08410 PF03129 Anticodon binding domain CUB96_08410 PF13393 Histidyl-tRNA synthetase CUB96_08415 PF00152 tRNA synthetases class II (D, K and N) CUB96_08415 PF01336 OB-fold nucleic acid binding domain CUB96_08415 PF02938 GAD domain CUB96_08445 PF00155 Aminotransferase class I and II CUB96_08450 PF02801 Beta-ketoacyl synthase, C-terminal domain CUB96_08450 PF00109 Beta-ketoacyl synthase, N-terminal domain CUB96_08475 PF04551 GcpE protein CUB96_08485 PF00809 Pterin binding enzyme CUB96_08495 PF01066 CDP-alcohol phosphatidyltransferase CUB96_08500 PF01411 tRNA synthetases class II (A) CUB96_08500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUB96_08500 PF02272 DHHA1 domain CUB96_08505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUB96_08510 PF00005 ABC transporter CUB96_08535 PF00772 DnaB-like helicase N terminal domain CUB96_08535 PF03796 DnaB-like helicase C terminal domain CUB96_08765 PF00817 impB/mucB/samB family CUB96_08765 PF11799 impB/mucB/samB family C-terminal domain CUB96_08770 PF01641 SelR domain CUB96_08775 PF02801 Beta-ketoacyl synthase, C-terminal domain CUB96_08775 PF00109 Beta-ketoacyl synthase, N-terminal domain CUB96_08810 PF00209 Sodium:neurotransmitter symporter family CUB96_08815 PF10417 C-terminal domain of 1-Cys peroxiredoxin CUB96_08815 PF00578 AhpC/TSA family CUB96_08820 PF05552 Conserved TM helix CUB96_08820 PF00924 Mechanosensitive ion channel CUB96_08825 PF00696 Amino acid kinase family CUB96_08830 PF01765 Ribosome recycling factor CUB96_08865 PF05193 Peptidase M16 inactive domain CUB96_08865 PF00675 Insulinase (Peptidase family M16) CUB96_08880 PF01263 Aldose 1-epimerase CUB96_08890 PF00005 ABC transporter CUB96_08895 PF12849 PBP superfamily domain CUB96_08900 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_08910 PF00005 ABC transporter CUB96_08915 PF01895 PhoU domain CUB96_08920 PF00291 Pyridoxal-phosphate dependent enzyme CUB96_08925 PF01507 Phosphoadenosine phosphosulfate reductase family CUB96_08930 PF01507 Phosphoadenosine phosphosulfate reductase family CUB96_08935 PF00009 Elongation factor Tu GTP binding domain CUB96_08940 PF00009 Elongation factor Tu GTP binding domain CUB96_08950 PF00005 ABC transporter CUB96_08955 PF00528 Binding-protein-dependent transport system inner membrane component CUB96_08960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CUB96_08960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CUB96_08980 PF03781 Sulfatase-modifying factor enzyme 1 CUB96_08995 PF01136 Peptidase family U32 CUB96_09005 PF00521 DNA gyrase/topoisomerase IV, subunit A CUB96_09005 PF03989 DNA gyrase C-terminal domain, beta-propeller CUB96_09010 PF01751 Toprim domain CUB96_09010 PF00986 DNA gyrase B subunit, carboxyl terminus CUB96_09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_09010 PF00204 DNA gyrase B CUB96_09025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUB96_09025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CUB96_09035 PF00551 Formyl transferase CUB96_09045 PF00149 Calcineurin-like phosphoesterase CUB96_09050 PF02254 TrkA-N domain CUB96_09050 PF00999 Sodium/hydrogen exchanger family CUB96_09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUB96_09100 PF00085 Thioredoxin CUB96_09105 PF03313 Serine dehydratase alpha chain CUB96_09105 PF03315 Serine dehydratase beta chain CUB96_09120 PF01118 Semialdehyde dehydrogenase, NAD binding domain CUB96_09120 PF02774 Semialdehyde dehydrogenase, dimerisation domain CUB96_09140 PF01263 Aldose 1-epimerase CUB96_09150 PF13472 GDSL-like Lipase/Acylhydrolase family CUB96_09150 PF07859 alpha/beta hydrolase fold CUB96_09160 PF18318 Glutamine synthetase C-terminal domain CUB96_09160 PF12437 Glutamine synthetase type III N terminal CUB96_09160 PF00120 Glutamine synthetase, catalytic domain CUB96_09165 PF00468 Ribosomal protein L34 CUB96_09170 PF00825 Ribonuclease P CUB96_09175 PF01809 Putative membrane protein insertion efficiency factor CUB96_09180 PF14849 YidC periplasmic domain CUB96_09180 PF02096 60Kd inner membrane protein CUB96_09190 PF04898 Glutamate synthase central domain CUB96_09190 PF01645 Conserved region in glutamate synthase CUB96_09190 PF01493 GXGXG motif CUB96_09190 PF00310 Glutamine amidotransferases class-II CUB96_09200 PF12437 Glutamine synthetase type III N terminal CUB96_09200 PF18318 Glutamine synthetase C-terminal domain CUB96_09200 PF00120 Glutamine synthetase, catalytic domain CUB96_09205 PF02142 MGS-like domain CUB96_09205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUB96_09205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUB96_09210 PF00117 Glutamine amidotransferase class-I CUB96_09210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CUB96_09215 PF16363 GDP-mannose 4,6 dehydratase CUB96_09220 PF01370 NAD dependent epimerase/dehydratase family CUB96_09225 PF03553 Na+/H+ antiporter family CUB96_09235 PF01238 Phosphomannose isomerase type I CUB96_09245 PF02542 YgbB family CUB96_09250 PF00459 Inositol monophosphatase family CUB96_09255 PF17092 Penicillin-binding protein OB-like domain CUB96_09255 PF00912 Transglycosylase CUB96_09255 PF00905 Penicillin binding protein transpeptidase domain CUB96_09265 PF02472 Biopolymer transport protein ExbD/TolR CUB96_09270 PF01618 MotA/TolQ/ExbB proton channel family CUB96_09275 PF01541 GIY-YIG catalytic domain CUB96_09275 PF08459 UvrC Helix-hairpin-helix N-terminal CUB96_09275 PF02151 UvrB/uvrC motif CUB96_09280 PF02590 Predicted SPOUT methyltransferase CUB96_09285 PF00380 Ribosomal protein S9/S16 CUB96_09290 PF00572 Ribosomal protein L13 CUB96_09295 PF01176 Translation initiation factor 1A / IF-1 CUB96_09300 PF03853 YjeF-related protein N-terminus CUB96_09300 PF01256 Carbohydrate kinase CUB96_09305 PF04002 RadC-like JAB domain CUB96_09325 PF12169 DNA polymerase III subunits gamma and tau domain III CUB96_09330 PF02575 YbaB/EbfC DNA-binding family CUB96_09340 PF01368 DHH family CUB96_09340 PF07085 DRTGG domain CUB96_09340 PF00571 CBS domain CUB96_09340 PF02833 DHHA2 domain CUB96_09350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CUB96_09410 PF01761 3-dehydroquinate synthase CUB96_09420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUB96_09430 PF00037 4Fe-4S binding domain CUB96_09430 PF13247 4Fe-4S dicluster domain CUB96_09440 PF00270 DEAD/DEAH box helicase CUB96_09440 PF17191 RecG wedge domain CUB96_09440 PF00271 Helicase conserved C-terminal domain CUB96_09445 PF01510 N-acetylmuramoyl-L-alanine amidase CUB96_09445 PF01476 LysM domain CUB96_09445 PF01471 Putative peptidoglycan binding domain CUB96_09450 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CUB96_09450 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CUB96_09460 PF01648 4'-phosphopantetheinyl transferase superfamily CUB96_09465 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CUB96_09470 PF02142 MGS-like domain CUB96_09470 PF01808 AICARFT/IMPCHase bienzyme CUB96_09475 PF03948 Ribosomal protein L9, C-terminal domain CUB96_09475 PF01281 Ribosomal protein L9, N-terminal domain CUB96_09480 PF01544 CorA-like Mg2+ transporter protein CUB96_09485 PF00696 Amino acid kinase family CUB96_09510 PF00005 ABC transporter CUB96_09515 PF13307 Helicase C-terminal domain CUB96_09515 PF06733 DEAD_2 CUB96_09525 PF00288 GHMP kinases N terminal domain CUB96_09530 PF00204 DNA gyrase B CUB96_09530 PF00986 DNA gyrase B subunit, carboxyl terminus CUB96_09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_09530 PF01751 Toprim domain CUB96_09535 PF01255 Putative undecaprenyl diphosphate synthase CUB96_09540 PF00483 Nucleotidyl transferase CUB96_09540 PF01050 Mannose-6-phosphate isomerase CUB96_09545 PF03652 Holliday junction resolvase CUB96_09560 PF00830 Ribosomal L28 family CUB96_09575 PF02424 ApbE family CUB96_09585 PF00113 Enolase, C-terminal TIM barrel domain CUB96_09585 PF03952 Enolase, N-terminal domain CUB96_09595 PF00884 Sulfatase CUB96_09605 PF00392 Bacterial regulatory proteins, gntR family CUB96_09605 PF07729 FCD domain CUB96_09610 PF00005 ABC transporter CUB96_09615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CUB96_09615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CUB96_09630 PF01370 NAD dependent epimerase/dehydratase family CUB96_09630 PF08338 Domain of unknown function (DUF1731) CUB96_09655 PF04235 Protein of unknown function (DUF418) CUB96_09660 PF17863 AAA lid domain CUB96_09660 PF07726 ATPase family associated with various cellular activities (AAA) CUB96_09670 PF00005 ABC transporter CUB96_09700 PF01212 Beta-eliminating lyase CUB96_09710 PF13411 MerR HTH family regulatory protein CUB96_09715 PF00248 Aldo/keto reductase family CUB96_09720 PF03793 PASTA domain CUB96_09720 PF00069 Protein kinase domain CUB96_09730 PF00753 Metallo-beta-lactamase superfamily CUB96_09730 PF16123 Hydroxyacylglutathione hydrolase C-terminus CUB96_09740 PF03781 Sulfatase-modifying factor enzyme 1 CUB96_09740 PF12867 DinB superfamily CUB96_09750 PF02702 Osmosensitive K+ channel His kinase sensor domain CUB96_09750 PF00512 His Kinase A (phospho-acceptor) domain CUB96_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_09750 PF13492 GAF domain CUB96_09750 PF13493 Domain of unknown function (DUF4118) CUB96_09755 PF02669 K+-transporting ATPase, c chain CUB96_09800 PF03527 RHS protein CUB96_09800 PF05593 RHS Repeat CUB96_09800 PF14220 Domain of unknown function (DUF4329) CUB96_09845 PF13539 D-alanyl-D-alanine carboxypeptidase CUB96_09860 PF02386 Cation transport protein CUB96_09865 PF01554 MatE CUB96_09890 PF00398 Ribosomal RNA adenine dimethylase CUB96_09895 PF01370 NAD dependent epimerase/dehydratase family CUB96_09930 PF00884 Sulfatase CUB96_09955 PF00920 Dehydratase family CUB96_09960 PF00072 Response regulator receiver domain CUB96_09960 PF00486 Transcriptional regulatory protein, C terminal CUB96_09965 PF13426 PAS domain CUB96_09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_09965 PF00512 His Kinase A (phospho-acceptor) domain CUB96_09965 PF00672 HAMP domain CUB96_09985 PF01634 ATP phosphoribosyltransferase CUB96_09985 PF08029 HisG, C-terminal domain CUB96_09990 PF05195 Aminopeptidase P, N-terminal domain CUB96_09990 PF00557 Metallopeptidase family M24 CUB96_10005 PF01790 Prolipoprotein diacylglyceryl transferase CUB96_10010 PF05343 M42 glutamyl aminopeptidase CUB96_10035 PF03958 Bacterial type II/III secretion system short domain CUB96_10035 PF00263 Bacterial type II and III secretion system protein CUB96_10040 PF01121 Dephospho-CoA kinase CUB96_10045 PF07498 Rho termination factor, N-terminal domain CUB96_10045 PF07497 Rho termination factor, RNA-binding domain CUB96_10045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUB96_10050 PF00403 Heavy-metal-associated domain CUB96_10055 PF00403 Heavy-metal-associated domain CUB96_10060 PF00480 ROK family CUB96_10065 PF14437 MafB19-like deaminase CUB96_10070 PF04055 Radical SAM superfamily CUB96_10070 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CUB96_10075 PF14376 Haem-binding domain CUB96_10075 PF03150 Di-haem cytochrome c peroxidase CUB96_10075 PF00034 Cytochrome c CUB96_10090 PF02421 Ferrous iron transport protein B CUB96_10090 PF07664 Ferrous iron transport protein B C terminus CUB96_10090 PF17910 FeoB cytosolic helical domain CUB96_10090 PF07670 Nucleoside recognition CUB96_10135 PF00588 SpoU rRNA Methylase family CUB96_10135 PF08032 RNA 2'-O ribose methyltransferase substrate binding CUB96_10140 PF02910 Fumarate reductase flavoprotein C-term CUB96_10140 PF00890 FAD binding domain CUB96_10150 PF00534 Glycosyl transferases group 1 CUB96_10160 PF09382 RQC domain CUB96_10160 PF16124 RecQ zinc-binding CUB96_10160 PF00270 DEAD/DEAH box helicase CUB96_10160 PF00271 Helicase conserved C-terminal domain CUB96_10160 PF00570 HRDC domain CUB96_10165 PF16347 Domain of unknown function (DUF4976) CUB96_10165 PF00884 Sulfatase CUB96_10175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUB96_10195 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CUB96_10195 PF05221 S-adenosyl-L-homocysteine hydrolase CUB96_10200 PF00438 S-adenosylmethionine synthetase, N-terminal domain CUB96_10200 PF02772 S-adenosylmethionine synthetase, central domain CUB96_10200 PF02773 S-adenosylmethionine synthetase, C-terminal domain CUB96_10205 PF13649 Methyltransferase domain CUB96_10250 PF00873 AcrB/AcrD/AcrF family CUB96_10270 PF02219 Methylenetetrahydrofolate reductase CUB96_10280 PF07244 Surface antigen variable number repeat CUB96_10280 PF01103 Surface antigen CUB96_10285 PF05697 Bacterial trigger factor protein (TF) CUB96_10285 PF05698 Bacterial trigger factor protein (TF) C-terminus CUB96_10285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUB96_10290 PF00574 Clp protease CUB96_10295 PF07724 AAA domain (Cdc48 subfamily) CUB96_10295 PF10431 C-terminal, D2-small domain, of ClpB protein CUB96_10295 PF06689 ClpX C4-type zinc finger CUB96_10300 PF00814 Glycoprotease family CUB96_10310 PF03143 Elongation factor Tu C-terminal domain CUB96_10310 PF03144 Elongation factor Tu domain 2 CUB96_10310 PF00009 Elongation factor Tu GTP binding domain CUB96_10325 PF02357 Transcription termination factor nusG CUB96_10325 PF00467 KOW motif CUB96_10330 PF03946 Ribosomal protein L11, N-terminal domain CUB96_10330 PF00298 Ribosomal protein L11, RNA binding domain CUB96_10335 PF00687 Ribosomal protein L1p/L10e family CUB96_10340 PF00466 Ribosomal protein L10 CUB96_10345 PF00542 Ribosomal protein L7/L12 C-terminal domain CUB96_10345 PF16320 Ribosomal protein L7/L12 dimerisation domain CUB96_10350 PF10385 RNA polymerase beta subunit external 1 domain CUB96_10350 PF04565 RNA polymerase Rpb2, domain 3 CUB96_10350 PF04560 RNA polymerase Rpb2, domain 7 CUB96_10350 PF00562 RNA polymerase Rpb2, domain 6 CUB96_10350 PF04563 RNA polymerase beta subunit CUB96_10350 PF04561 RNA polymerase Rpb2, domain 2 CUB96_10355 PF04983 RNA polymerase Rpb1, domain 3 CUB96_10355 PF04997 RNA polymerase Rpb1, domain 1 CUB96_10355 PF05000 RNA polymerase Rpb1, domain 4 CUB96_10355 PF04998 RNA polymerase Rpb1, domain 5 CUB96_10355 PF00623 RNA polymerase Rpb1, domain 2 CUB96_10370 PF06421 GTP-binding protein LepA C-terminus CUB96_10370 PF03144 Elongation factor Tu domain 2 CUB96_10370 PF00009 Elongation factor Tu GTP binding domain CUB96_10370 PF00679 Elongation factor G C-terminus CUB96_10380 PF00884 Sulfatase CUB96_10380 PF16347 Domain of unknown function (DUF4976) CUB96_10385 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_10385 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_10390 PF09190 DALR domain CUB96_10390 PF01406 tRNA synthetases class I (C) catalytic domain CUB96_10400 PF00892 EamA-like transporter family CUB96_10410 PF16326 ABC transporter C-terminal domain CUB96_10410 PF12848 ABC transporter CUB96_10410 PF00005 ABC transporter CUB96_10455 PF01914 MarC family integral membrane protein CUB96_10460 PF00561 alpha/beta hydrolase fold CUB96_10495 PF00072 Response regulator receiver domain CUB96_10495 PF04397 LytTr DNA-binding domain CUB96_10505 PF01055 Glycosyl hydrolases family 31 CUB96_10505 PF17137 Domain of unknown function (DUF5110) CUB96_10505 PF16338 Domain of unknown function (DUF4968) CUB96_10505 PF13802 Galactose mutarotase-like CUB96_10525 PF12146 Serine aminopeptidase, S33 CUB96_10540 PF01595 Cyclin M transmembrane N-terminal domain CUB96_10540 PF03471 Transporter associated domain CUB96_10540 PF00571 CBS domain CUB96_10555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CUB96_10555 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CUB96_10625 PF02910 Fumarate reductase flavoprotein C-term CUB96_10625 PF00890 FAD binding domain CUB96_10630 PF13085 2Fe-2S iron-sulfur cluster binding domain CUB96_10660 PF02580 D-Tyr-tRNA(Tyr) deacylase CUB96_10675 PF00550 Phosphopantetheine attachment site CUB96_10680 PF03309 Type III pantothenate kinase CUB96_10685 PF04101 Glycosyltransferase family 28 C-terminal domain CUB96_10685 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CUB96_10690 PF02911 Formyl transferase, C-terminal domain CUB96_10690 PF00551 Formyl transferase CUB96_10695 PF13361 UvrD-like helicase C-terminal domain CUB96_10695 PF00580 UvrD/REP helicase N-terminal domain CUB96_10700 PF00474 Sodium:solute symporter family CUB96_10705 PF00288 GHMP kinases N terminal domain CUB96_10705 PF08544 GHMP kinases C terminal CUB96_10705 PF10509 Galactokinase galactose-binding signature CUB96_10710 PF02397 Bacterial sugar transferase CUB96_10715 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CUB96_10735 PF00005 ABC transporter CUB96_10735 PF01061 ABC-2 type transporter CUB96_10735 PF00498 FHA domain CUB96_10750 PF04015 Domain of unknown function (DUF362) CUB96_10755 PF06962 Putative rRNA methylase CUB96_10760 PF01725 Ham1 family CUB96_10765 PF03372 Endonuclease/Exonuclease/phosphatase family CUB96_10770 PF08529 NusA N-terminal domain CUB96_10770 PF00575 S1 RNA binding domain CUB96_10770 PF13184 NusA-like KH domain CUB96_10775 PF00009 Elongation factor Tu GTP binding domain CUB96_10775 PF11987 Translation-initiation factor 2 CUB96_10775 PF04760 Translation initiation factor IF-2, N-terminal region CUB96_10780 PF02033 Ribosome-binding factor A CUB96_10785 PF00884 Sulfatase CUB96_10795 PF02554 Carbon starvation protein CstA CUB96_10805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CUB96_10810 PF01979 Amidohydrolase family CUB96_10815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CUB96_10815 PF00364 Biotin-requiring enzyme CUB96_10815 PF02817 e3 binding domain CUB96_10820 PF01965 DJ-1/PfpI family CUB96_10825 PF00535 Glycosyl transferase family 2 CUB96_10840 PF00535 Glycosyl transferase family 2 CUB96_10845 PF01531 Glycosyl transferase family 11 CUB96_10850 PF00535 Glycosyl transferase family 2 CUB96_10860 PF01501 Glycosyl transferase family 8 CUB96_10870 PF13089 Polyphosphate kinase N-terminal domain CUB96_10870 PF17941 Polyphosphate kinase C-terminal domain 1 CUB96_10870 PF13090 Polyphosphate kinase C-terminal domain 2 CUB96_10870 PF02503 Polyphosphate kinase middle domain CUB96_10885 PF00557 Metallopeptidase family M24 CUB96_10890 PF05191 Adenylate kinase, active site lid CUB96_10895 PF00344 SecY translocase CUB96_10900 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CUB96_10905 PF00333 Ribosomal protein S5, N-terminal domain CUB96_10905 PF03719 Ribosomal protein S5, C-terminal domain CUB96_10910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CUB96_10915 PF00347 Ribosomal protein L6 CUB96_10920 PF00410 Ribosomal protein S8 CUB96_10925 PF00673 ribosomal L5P family C-terminus CUB96_10925 PF00281 Ribosomal protein L5 CUB96_10930 PF00467 KOW motif CUB96_10930 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CUB96_10935 PF01513 ATP-NAD kinase CUB96_10940 PF03330 Lytic transglycolase CUB96_10940 PF05036 Sporulation related domain CUB96_10945 PF02872 5'-nucleotidase, C-terminal domain CUB96_10945 PF00149 Calcineurin-like phosphoesterase CUB96_10955 PF12419 SNF2 Helicase protein CUB96_10955 PF00271 Helicase conserved C-terminal domain CUB96_10955 PF00176 SNF2 family N-terminal domain CUB96_10960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUB96_10975 PF08245 Mur ligase middle domain CUB96_10980 PF02875 Mur ligase family, glutamate ligase domain CUB96_10980 PF08245 Mur ligase middle domain CUB96_10985 PF01136 Peptidase family U32 CUB96_10985 PF12392 Collagenase CUB96_10995 PF00773 RNB domain CUB96_10995 PF17876 Cold shock domain CUB96_10995 PF00575 S1 RNA binding domain CUB96_10995 PF08206 Ribonuclease B OB domain CUB96_11005 PF01923 Cobalamin adenosyltransferase CUB96_11015 PF07690 Major Facilitator Superfamily CUB96_11025 PF01139 tRNA-splicing ligase RtcB CUB96_11040 PF01641 SelR domain CUB96_11040 PF01625 Peptide methionine sulfoxide reductase CUB96_11050 PF00330 Aconitase family (aconitate hydratase) CUB96_11050 PF00694 Aconitase C-terminal domain CUB96_11055 PF01476 LysM domain CUB96_11055 PF01510 N-acetylmuramoyl-L-alanine amidase CUB96_11055 PF01471 Putative peptidoglycan binding domain CUB96_11075 PF01131 DNA topoisomerase CUB96_11075 PF01751 Toprim domain CUB96_11120 PF00529 HlyD membrane-fusion protein of T1SS CUB96_11120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUB96_11125 PF13411 MerR HTH family regulatory protein CUB96_11135 PF02780 Transketolase, C-terminal domain CUB96_11135 PF02779 Transketolase, pyrimidine binding domain CUB96_11135 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CUB96_11180 PF03808 Glycosyl transferase WecB/TagA/CpsF family CUB96_11185 PF03099 Biotin/lipoate A/B protein ligase family CUB96_11185 PF12706 Beta-lactamase superfamily domain CUB96_11190 PF02463 RecF/RecN/SMC N terminal domain CUB96_11195 PF00403 Heavy-metal-associated domain CUB96_11200 PF00722 Glycosyl hydrolases family 16 CUB96_11215 PF00202 Aminotransferase class-III CUB96_11220 PF01741 Large-conductance mechanosensitive channel, MscL CUB96_11225 PF00245 Alkaline phosphatase CUB96_11230 PF02838 Glycosyl hydrolase family 20, domain 2 CUB96_11230 PF00728 Glycosyl hydrolase family 20, catalytic domain CUB96_11230 PF07691 PA14 domain CUB96_11235 PF05343 M42 glutamyl aminopeptidase CUB96_11245 PF02915 Rubrerythrin CUB96_11255 PF00884 Sulfatase CUB96_11255 PF08019 Phosphoethanolamine transferase EptA/EptB CUB96_11285 PF00939 Sodium:sulfate symporter transmembrane region CUB96_11290 PF00512 His Kinase A (phospho-acceptor) domain CUB96_11290 PF00989 PAS fold CUB96_11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_11305 PF16875 Glycosyl hydrolase family 36 N-terminal domain CUB96_11305 PF16874 Glycosyl hydrolase family 36 C-terminal domain CUB96_11310 PF00216 Bacterial DNA-binding protein CUB96_11330 PF01938 TRAM domain CUB96_11330 PF05958 tRNA (Uracil-5-)-methyltransferase CUB96_11335 PF04055 Radical SAM superfamily CUB96_11335 PF00919 Uncharacterized protein family UPF0004 CUB96_11335 PF01938 TRAM domain CUB96_11345 PF01336 OB-fold nucleic acid binding domain CUB96_11345 PF01966 HD domain CUB96_11350 PF00754 F5/8 type C domain CUB96_11350 PF13088 BNR repeat-like domain CUB96_11350 PF02973 Sialidase, N-terminal domain CUB96_11355 PF01261 Xylose isomerase-like TIM barrel CUB96_11360 PF00113 Enolase, C-terminal TIM barrel domain CUB96_11360 PF03952 Enolase, N-terminal domain CUB96_11375 PF14698 Argininosuccinate lyase C-terminal CUB96_11375 PF00206 Lyase CUB96_11380 PF01740 STAS domain CUB96_11380 PF00916 Sulfate permease family CUB96_11390 PF03477 ATP cone domain CUB96_11440 PF17871 AAA lid domain CUB96_11440 PF00004 ATPase family associated with various cellular activities (AAA) CUB96_11440 PF02861 Clp amino terminal domain, pathogenicity island component CUB96_11440 PF10431 C-terminal, D2-small domain, of ClpB protein CUB96_11440 PF07724 AAA domain (Cdc48 subfamily) CUB96_11460 PF02669 K+-transporting ATPase, c chain CUB96_11470 PF03814 Potassium-transporting ATPase A subunit CUB96_11480 PF00072 Response regulator receiver domain CUB96_11480 PF00486 Transcriptional regulatory protein, C terminal CUB96_11485 PF13493 Domain of unknown function (DUF4118) CUB96_11485 PF00512 His Kinase A (phospho-acceptor) domain CUB96_11485 PF02702 Osmosensitive K+ channel His kinase sensor domain CUB96_11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUB96_11485 PF13492 GAF domain CUB96_11500 PF02837 Glycosyl hydrolases family 2, sugar binding domain CUB96_11500 PF02929 Beta galactosidase small chain CUB96_11500 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CUB96_11500 PF00703 Glycosyl hydrolases family 2 CUB96_11500 PF16353 Domain of unknown function(DUF4981) CUB96_11510 PF01026 TatD related DNase CUB96_11515 PF00877 NlpC/P60 family CUB96_11515 PF01476 LysM domain CUB96_11540 PF00712 DNA polymerase III beta subunit, N-terminal domain CUB96_11540 PF02768 DNA polymerase III beta subunit, C-terminal domain CUB96_11540 PF02767 DNA polymerase III beta subunit, central domain CUB96_11550 PF00132 Bacterial transferase hexapeptide (six repeats) CUB96_11550 PF14602 Hexapeptide repeat of succinyl-transferase CUB96_11550 PF12804 MobA-like NTP transferase domain CUB96_11555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUB96_11555 PF01872 RibD C-terminal domain CUB96_11570 PF00595 PDZ domain CUB96_11580 PF10369 Small subunit of acetolactate synthase CUB96_11585 PF00270 DEAD/DEAH box helicase CUB96_11585 PF11898 Domain of unknown function (DUF3418) CUB96_11585 PF04408 Helicase associated domain (HA2) CUB96_11585 PF00271 Helicase conserved C-terminal domain CUB96_11585 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CUB96_11595 PF02386 Cation transport protein CUB96_11605 PF00977 Histidine biosynthesis protein CUB96_11620 PF01638 HxlR-like helix-turn-helix CUB96_11640 PF01336 OB-fold nucleic acid binding domain CUB96_11640 PF00152 tRNA synthetases class II (D, K and N) CUB96_11650 PF02660 Glycerol-3-phosphate acyltransferase CUB96_11655 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CUB96_11655 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CUB96_11670 PF13186 Iron-sulfur cluster-binding domain CUB96_11670 PF04055 Radical SAM superfamily CUB96_11680 PF01053 Cys/Met metabolism PLP-dependent enzyme CUB96_11690 PF01078 Magnesium chelatase, subunit ChlI CUB96_11690 PF13335 Magnesium chelatase, subunit ChlI C-terminal CUB96_11705 PF00180 Isocitrate/isopropylmalate dehydrogenase CUB96_11715 PF11922 Domain of unknown function (DUF3440) CUB96_11715 PF01507 Phosphoadenosine phosphosulfate reductase family CUB96_11720 PF02195 ParB-like nuclease domain CUB96_11735 PF00565 Staphylococcal nuclease homologue CUB96_11755 PF03061 Thioesterase superfamily CUB96_11760 PF07690 Major Facilitator Superfamily CUB96_11765 PF01757 Acyltransferase family CUB96_11770 PF00300 Histidine phosphatase superfamily (branch 1) CUB96_11775 PF01301 Glycosyl hydrolases family 35 CUB96_11780 PF01301 Glycosyl hydrolases family 35 CUB96_11820 PF02080 TrkA-C domain CUB96_11820 PF03600 Citrate transporter CUB96_11835 PF01757 Acyltransferase family CUB96_11855 PF00535 Glycosyl transferase family 2 CUB96_11860 PF01370 NAD dependent epimerase/dehydratase family CUB96_11870 PF01501 Glycosyl transferase family 8 CUB96_11870 PF00535 Glycosyl transferase family 2 CUB96_11875 PF08759 Glycosyltransferase GT-D fold CUB96_11875 PF01501 Glycosyl transferase family 8 CUB96_11880 PF00149 Calcineurin-like phosphoesterase CUB96_11895 PF01509 TruB family pseudouridylate synthase (N terminal domain) CUB96_11895 PF16198 tRNA pseudouridylate synthase B C-terminal domain CUB96_11900 PF06574 FAD synthetase CUB96_11900 PF01687 Riboflavin kinase CUB96_11905 PF02261 Aspartate decarboxylase CUB96_11915 PF00114 Pilin (bacterial filament) CUB96_11915 PF07963 Prokaryotic N-terminal methylation motif CUB96_11920 PF00793 DAHP synthetase I family CUB96_11940 PF13419 Haloacid dehalogenase-like hydrolase CUB96_11945 PF14602 Hexapeptide repeat of succinyl-transferase CUB96_11945 PF12464 Maltose acetyltransferase CUB96_11950 PF00117 Glutamine amidotransferase class-I CUB96_11950 PF02540 NAD synthase CUB96_11950 PF00958 GMP synthase C terminal domain