locus-tag	class	description
DMI79_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DMI79_00010	COG1131	(ABC) transporter
DMI79_00030	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DMI79_00035	COG0564	pseudouridine synthase activity
DMI79_00050	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DMI79_00055	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DMI79_00065	COG0513	Belongs to the DEAD box helicase family
DMI79_00080	COG0673	inositol 2-dehydrogenase activity
DMI79_00100	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DMI79_00115	COG1971	Probably functions as a manganese efflux pump
DMI79_00145	COG0863	Belongs to the N(4) N(6)-methyltransferase family
DMI79_00330	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DMI79_00355	COG0442	prolyl-tRNA aminoacylation
DMI79_00390	COG0531	amino acid
DMI79_00395	COG2066	Belongs to the glutaminase family
DMI79_00410	COG1115	amino acid carrier protein
DMI79_00420	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DMI79_00425	COG2890	protein-(glutamine-N5) methyltransferase activity
DMI79_00430	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DMI79_00435	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DMI79_00455	COG2226	methyltransferase
DMI79_00460	COG0534	Mate efflux family protein
DMI79_00470	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DMI79_00475	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DMI79_00480	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DMI79_00500	COG1121	(ABC) transporter
DMI79_00505	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DMI79_00510	COG3880	PFAM UvrB UvrC protein
DMI79_00515	COG3869	Catalyzes the specific phosphorylation of arginine residues in
DMI79_00520	COG0542	response to heat
DMI79_00535	COG0179	Fumarylacetoacetate (FAA) hydrolase
DMI79_00540	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DMI79_00555	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
DMI79_00555	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DMI79_00570	COG0180	Tryptophanyl-tRNA synthetase
DMI79_00580	COG1692	metallophosphoesterase
DMI79_00590	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DMI79_00605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DMI79_00610	COG2816	NAD+ diphosphatase activity
DMI79_00625	COG0156	8-amino-7-oxononanoate synthase activity
DMI79_00640	COG3266	domain, Protein
DMI79_00640	COG0515	serine threonine protein kinase
DMI79_00680	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DMI79_00690	COG3189	MarR family transcriptional regulator
DMI79_00700	COG0181	hydroxymethylbilane synthase activity
DMI79_00705	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DMI79_00715	COG1469	GTP cyclohydrolase I activity
DMI79_00720	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DMI79_00725	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DMI79_00730	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DMI79_00735	COG1940	carbohydrate kinase activity
DMI79_00750	COG0494	nUDIX hydrolase
DMI79_00755	COG1566	PFAM secretion protein HlyD family protein
DMI79_00760	COG0577	efflux transmembrane transporter activity
DMI79_00760	COG1136	(ABC) transporter
DMI79_00765	COG0577	efflux transmembrane transporter activity
DMI79_00765	COG1136	(ABC) transporter
DMI79_00770	COG1538	Outer membrane efflux protein
DMI79_00780	COG1720	tRNA m6t6A37 methyltransferase activity
DMI79_00785	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DMI79_00790	COG0540	Belongs to the ATCase OTCase family
DMI79_00795	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DMI79_00815	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
DMI79_00820	COG2957	Belongs to the agmatine deiminase family
DMI79_00830	COG0750	zinc metalloprotease
DMI79_00840	COG3119	arylsulfatase activity
DMI79_00850	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DMI79_00850	COG1918	ferrous iron import across plasma membrane
DMI79_00910	COG1475	DNA binding
DMI79_00945	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DMI79_00960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DMI79_00965	COG0601	transmembrane transport
DMI79_01025	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DMI79_01030	COG1132	(ABC) transporter
DMI79_01035	COG1132	(ABC) transporter
DMI79_01050	COG1127	ABC transporter
DMI79_01055	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DMI79_01085	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DMI79_01100	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
DMI79_01105	COG0504	CTP synthase activity
DMI79_01110	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DMI79_01135	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMI79_01145	COG1322	Protein conserved in bacteria
DMI79_01150	COG0546	phosphoglycolate phosphatase activity
DMI79_01155	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DMI79_01165	COG4591	ABC-type transport system involved in lipoprotein release permease component
DMI79_01195	COG2755	lipolytic protein G-D-S-L family
DMI79_01195	COG0657	acetylesterase activity
DMI79_01200	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DMI79_01220	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DMI79_01225	COG2267	carboxylic ester hydrolase activity
DMI79_01240	COG0335	large ribosomal subunit rRNA binding
DMI79_01250	COG0346	lactoylglutathione lyase activity
DMI79_01265	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DMI79_01270	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
DMI79_01275	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DMI79_01275	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DMI79_01280	COG0427	acetyl-CoA hydrolase
DMI79_01290	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DMI79_01300	COG0205	6-phosphofructokinase activity
DMI79_01310	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DMI79_01315	COG0028	Belongs to the TPP enzyme family
DMI79_01340	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DMI79_01355	COG0471	metal ion transport
DMI79_01365	COG0351	phosphomethylpyrimidine kinase
DMI79_01420	COG1028	Short-chain dehydrogenase reductase Sdr
DMI79_01430	COG0242	peptide deformylase activity
DMI79_01435	COG1063	alcohol dehydrogenase
DMI79_01445	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DMI79_01450	COG1393	Belongs to the ArsC family
DMI79_01455	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DMI79_01465	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DMI79_01475	COG1187	pseudouridine synthase activity
DMI79_01485	COG0336	Belongs to the RNA methyltransferase TrmD family
DMI79_01490	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DMI79_01500	COG0539	negative regulation of cytoplasmic translation
DMI79_01545	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
DMI79_01550	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DMI79_01555	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DMI79_01560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DMI79_01600	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DMI79_01680	COG3015	lipoprotein NlpE involved in copper resistance
DMI79_01755	COG0305	Participates in initiation and elongation during chromosome replication
DMI79_01830	COG3645	SOS response
DMI79_01865	COG0662	Cupin 2, conserved barrel domain protein
DMI79_01865	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DMI79_01875	COG0416	fatty acid biosynthetic process
DMI79_01880	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DMI79_01890	COG0537	adenosine 5'-monophosphoramidase activity
DMI79_01895	COG0009	L-threonylcarbamoyladenylate synthase
DMI79_01900	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DMI79_01905	COG0228	four-way junction DNA binding
DMI79_01925	COG1862	Preprotein translocase
DMI79_01930	COG0343	queuine tRNA-ribosyltransferase activity
DMI79_01935	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DMI79_01945	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DMI79_01950	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DMI79_01955	COG0776	regulation of translation
DMI79_01990	COG0811	peptide transport
DMI79_02010	COG3250	beta-galactosidase activity
DMI79_02015	COG0525	valine-tRNA ligase activity
DMI79_02030	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DMI79_02035	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DMI79_02040	COG0255	Belongs to the universal ribosomal protein uL29 family
DMI79_02045	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DMI79_02050	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DMI79_02055	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DMI79_02065	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DMI79_02070	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DMI79_02075	COG0089	rRNA binding
DMI79_02080	COG0088	Forms part of the polypeptide exit tunnel
DMI79_02085	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DMI79_02090	COG0051	transcription antitermination factor activity, RNA binding
DMI79_02095	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DMI79_02100	COG0049	tRNA binding
DMI79_02105	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DMI79_02115	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DMI79_02125	COG3852	Histidine kinase
DMI79_02130	COG2204	response regulator
DMI79_02140	COG1722	exodeoxyribonuclease VII activity
DMI79_02145	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DMI79_02160	COG0795	lipopolysaccharide-transporting ATPase activity
DMI79_02165	COG1160	GTP binding
DMI79_02170	COG0444	Belongs to the ABC transporter superfamily
DMI79_02190	COG1136	(ABC) transporter
DMI79_02190	COG0577	efflux transmembrane transporter activity
DMI79_02200	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DMI79_02325	COG0860	N-Acetylmuramoyl-L-alanine amidase
DMI79_02410	COG0863	Belongs to the N(4) N(6)-methyltransferase family
DMI79_02450	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DMI79_02455	COG0799	negative regulation of ribosome biogenesis
DMI79_02460	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DMI79_02520	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
DMI79_02535	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DMI79_02545	COG0300	oxidoreductase activity
DMI79_02565	COG0038	chloride channel
DMI79_02575	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DMI79_02590	COG0076	glutamate decarboxylase activity
DMI79_02605	COG0167	dihydroorotate dehydrogenase activity
DMI79_02610	COG0352	thiamine-phosphate diphosphorylase activity
DMI79_02630	COG1253	flavin adenine dinucleotide binding
DMI79_02635	COG1253	flavin adenine dinucleotide binding
DMI79_02645	COG1185	polyribonucleotide nucleotidyltransferase activity
DMI79_02650	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DMI79_02655	COG0110	maltose O-acetyltransferase activity
DMI79_02680	COG0101	tRNA pseudouridine synthase activity
DMI79_02685	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DMI79_02705	COG4968	Prepilin-type N-terminal cleavage methylation domain
DMI79_02720	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DMI79_02730	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DMI79_02750	COG1136	(ABC) transporter
DMI79_02755	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DMI79_02765	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DMI79_02790	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DMI79_02795	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DMI79_02800	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
DMI79_02815	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DMI79_02820	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DMI79_02835	COG2814	Major facilitator Superfamily
DMI79_02850	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DMI79_02850	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DMI79_02855	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
DMI79_02860	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DMI79_02865	COG0552	protein localization to endoplasmic reticulum
DMI79_02870	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DMI79_02890	COG1058	Belongs to the CinA family
DMI79_02890	COG1546	Belongs to the CinA family
DMI79_02900	COG0456	acetyltransferase
DMI79_02925	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DMI79_02930	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DMI79_02935	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DMI79_02940	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DMI79_02955	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DMI79_02955	COG0758	DNA mediated transformation
DMI79_02960	COG0758	DNA mediated transformation
DMI79_02965	COG1686	Belongs to the peptidase S11 family
DMI79_02970	COG0012	GTP binding
DMI79_02975	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DMI79_02985	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DMI79_02985	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DMI79_03000	COG3119	arylsulfatase activity
DMI79_03025	COG2259	Doxx family
DMI79_03030	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DMI79_03060	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DMI79_03080	COG2326	polyphosphate kinase activity
DMI79_03085	COG1349	DNA-binding transcription factor activity
DMI79_03100	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DMI79_03105	COG1162	GTPase activity
DMI79_03120	COG0742	ribosomal rna small subunit methyltransferase
DMI79_03135	COG2326	polyphosphate kinase activity
DMI79_03150	COG5434	Belongs to the glycosyl hydrolase 28 family
DMI79_03160	COG1073	alpha beta
DMI79_03165	COG0802	atpase or kinase
DMI79_03170	COG0261	This protein binds to 23S rRNA in the presence of protein L20
DMI79_03175	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DMI79_03180	COG0735	belongs to the Fur family
DMI79_03185	COG0396	ATPase activity
DMI79_03190	COG0719	Fe-S assembly protein
DMI79_03195	COG0719	Fe-S assembly protein
DMI79_03215	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DMI79_03255	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DMI79_03275	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DMI79_03280	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DMI79_03285	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DMI79_03290	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DMI79_03295	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DMI79_03300	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DMI79_03310	COG0356	it plays a direct role in the translocation of protons across the membrane
DMI79_03380	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DMI79_03410	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DMI79_03415	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DMI79_03420	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DMI79_03430	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DMI79_03440	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DMI79_03445	COG0047	phosphoribosylformylglycinamidine synthase activity
DMI79_03455	COG1363	Peptidase, m42
DMI79_03470	COG1077	Cell shape determining protein MreB Mrl
DMI79_03475	COG1530	ribonuclease E activity
DMI79_03500	COG0848	biopolymer transport protein
DMI79_03515	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DMI79_03540	COG0134	indole-3-glycerol-phosphate synthase activity
DMI79_03555	COG1253	flavin adenine dinucleotide binding
DMI79_03565	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DMI79_03580	COG0137	argininosuccinate synthase activity
DMI79_03600	COG0149	triose-phosphate isomerase activity
DMI79_03635	COG1040	competence protein
DMI79_03645	COG3956	TIGRFAM MazG family protein
DMI79_03665	COG1663	tetraacyldisaccharide 4'-kinase activity
DMI79_03670	COG0612	Peptidase, M16
DMI79_03700	COG0673	inositol 2-dehydrogenase activity
DMI79_03705	COG3034	peptidoglycan biosynthetic process
DMI79_03725	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DMI79_03730	COG0424	maF-like protein
DMI79_03735	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DMI79_03740	COG0515	serine threonine protein kinase
DMI79_03740	COG2815	serine threonine protein kinase
DMI79_03765	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DMI79_03775	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DMI79_03785	COG0571	ribonuclease III activity
DMI79_03805	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DMI79_03820	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DMI79_03840	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DMI79_03865	COG2076	Multidrug Resistance protein
DMI79_03940	COG1431	PFAM Stem cell self-renewal protein Piwi
DMI79_03955	COG2255	four-way junction helicase activity
DMI79_03960	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DMI79_03965	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DMI79_03970	COG1215	transferase activity, transferring glycosyl groups
DMI79_03975	COG1216	Glycosyl transferase, family 2
DMI79_04000	COG0438	transferase activity, transferring glycosyl groups
DMI79_04010	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DMI79_04020	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DMI79_04025	COG0482	sulfurtransferase activity
DMI79_04030	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DMI79_04040	COG2860	membrane
DMI79_04045	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DMI79_04050	COG2001	Belongs to the MraZ family
DMI79_04055	COG0275	rRNA processing
DMI79_04065	COG0768	penicillin binding
DMI79_04070	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DMI79_04075	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DMI79_04080	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DMI79_04085	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DMI79_04095	COG0772	Belongs to the SEDS family
DMI79_04100	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DMI79_04105	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DMI79_04110	COG1181	Belongs to the D-alanine--D-alanine ligase family
DMI79_04120	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DMI79_04125	COG0860	N-Acetylmuramoyl-L-alanine amidase
DMI79_04130	COG0321	lipoyl(octanoyl) transferase activity
DMI79_04135	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DMI79_04140	COG0066	3-isopropylmalate dehydratase activity
DMI79_04150	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMI79_04160	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DMI79_04170	COG4608	Belongs to the ABC transporter superfamily
DMI79_04180	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DMI79_04195	COG2877	3-deoxy-8-phosphooctulonate synthase activity
DMI79_04210	COG1137	ATPase activity
DMI79_04220	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DMI79_04245	COG0017	Asparaginyl-tRNA synthetase
DMI79_04255	COG3118	belongs to the thioredoxin family
DMI79_04305	COG0583	DNA-binding transcription factor activity
DMI79_04310	COG2855	membrane
DMI79_04315	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DMI79_04330	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DMI79_04340	COG0602	queuosine metabolic process
DMI79_04345	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DMI79_04350	COG0217	transcriptional regulatory protein
DMI79_04355	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DMI79_04360	COG4651	solute:proton antiporter activity
DMI79_04360	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DMI79_04370	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DMI79_04375	COG4864	UPF0365 protein
DMI79_04385	COG2022	thiamine diphosphate biosynthetic process
DMI79_04390	COG0531	amino acid
DMI79_04400	COG0628	permease
DMI79_04405	COG0019	diaminopimelate decarboxylase activity
DMI79_04410	COG0191	fructose-bisphosphate aldolase activity
DMI79_04445	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DMI79_04475	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DMI79_04480	COG0517	IMP dehydrogenase activity
DMI79_04480	COG0516	GMP reductase activity
DMI79_04485	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DMI79_04485	COG0519	Catalyzes the synthesis of GMP from XMP
DMI79_04520	COG0863	Belongs to the N(4) N(6)-methyltransferase family
DMI79_04550	COG0546	phosphoglycolate phosphatase activity
DMI79_04570	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DMI79_04585	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
DMI79_04590	COG0196	riboflavin kinase activity
DMI79_04595	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DMI79_04610	COG1408	metallophosphoesterase
DMI79_04620	COG1216	Glycosyl transferase, family 2
DMI79_04620	COG1442	glycosyl transferase family 8
DMI79_04630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DMI79_04635	COG1216	Glycosyl transferase, family 2
DMI79_04655	COG2755	lipolytic protein G-D-S-L family
DMI79_04655	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DMI79_04675	COG0471	metal ion transport
DMI79_04675	COG0490	domain, Protein
DMI79_04715	COG0588	phosphoglycerate mutase activity
DMI79_04720	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DMI79_04730	COG0477	Major facilitator Superfamily
DMI79_04735	COG1607	acyl-coa hydrolase
DMI79_04755	COG1525	nuclease
DMI79_04770	COG1475	DNA binding
DMI79_04775	COG3969	phosphoadenosine phosphosulfate
DMI79_04790	COG0473	3-isopropylmalate dehydrogenase activity
DMI79_04815	COG2873	o-acetylhomoserine
DMI79_04825	COG0535	radical SAM domain protein
DMI79_04840	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DMI79_04845	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DMI79_04855	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DMI79_04865	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DMI79_04865	COG1013	pyruvate-flavodoxin oxidoreductase activity
DMI79_04865	COG0674	pyruvate-flavodoxin oxidoreductase activity
DMI79_04865	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DMI79_04875	COG1733	regulation of RNA biosynthetic process
DMI79_04885	COG0107	imidazoleglycerol-phosphate synthase activity
DMI79_04895	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DMI79_04905	COG1643	Atp-dependent helicase
DMI79_04910	COG0440	acetolactate synthase activity
DMI79_04915	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMI79_04925	COG0445	tRNA wobble uridine modification
DMI79_04930	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DMI79_04930	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DMI79_04935	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DMI79_04945	COG0592	DNA-directed DNA polymerase activity
DMI79_04970	COG0791	NLP P60 protein
DMI79_04970	COG1388	LysM domain
DMI79_04975	COG0084	hydrolase, TatD family'
DMI79_04985	COG3250	beta-galactosidase activity
DMI79_05000	COG2205	protein histidine kinase activity
DMI79_05005	COG0745	RESPONSE REGULATOR receiver
DMI79_05015	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DMI79_05025	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
DMI79_05045	COG0542	response to heat
DMI79_05090	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DMI79_05100	COG0659	secondary active sulfate transmembrane transporter activity
DMI79_05105	COG0165	Argininosuccinate lyase
DMI79_05120	COG0148	phosphopyruvate hydratase activity
DMI79_05125	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DMI79_05135	COG3481	metal-dependent phosphohydrolase, HD sub domain
DMI79_05145	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DMI79_05150	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DMI79_05180	COG0490	domain, Protein
DMI79_05180	COG2985	domain, Protein
DMI79_05195	COG0471	metal ion transport
DMI79_05220	COG2194	sulfuric ester hydrolase activity
DMI79_05230	COG1592	Rubrerythrin
DMI79_05240	COG1363	Peptidase, m42
DMI79_05245	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DMI79_05255	COG1785	Belongs to the alkaline phosphatase family
DMI79_05260	COG1970	mechanosensitive ion channel activity
DMI79_05265	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DMI79_05275	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DMI79_05295	COG2217	Heavy metal translocating P-type atpase
DMI79_05300	COG0497	DNA recombination
DMI79_05305	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DMI79_05305	COG0321	lipoyl(octanoyl) transferase activity
DMI79_05310	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
DMI79_05340	COG0508	dehydrogenase complex catalyzes the overall conversion of
DMI79_05345	COG0022	dehydrogenase e1 component
DMI79_05350	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DMI79_05365	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DMI79_05370	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMI79_05430	COG5632	N-Acetylmuramoyl-L-alanine amidase
DMI79_05430	COG3409	Peptidoglycan-binding domain 1 protein
DMI79_05435	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DMI79_05465	COG1690	Belongs to the RtcB family
DMI79_05475	COG2814	Major facilitator Superfamily
DMI79_05485	COG2096	Adenosyltransferase
DMI79_05495	COG0557	exoribonuclease II activity
DMI79_05505	COG0826	peptidase U32
DMI79_05510	COG0285	dihydrofolate synthase activity
DMI79_05525	COG0673	inositol 2-dehydrogenase activity
DMI79_05530	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DMI79_05535	COG0737	Belongs to the 5'-nucleotidase family
DMI79_05545	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DMI79_05550	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DMI79_05565	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DMI79_05570	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DMI79_05575	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DMI79_05580	COG0200	Binds to the 23S rRNA
DMI79_05585	COG0201	protein transport
DMI79_05590	COG0563	adenylate kinase activity
DMI79_05595	COG0024	Methionine aminopeptidase
DMI79_05610	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DMI79_05615	COG1442	glycosyl transferase family 8
DMI79_05625	COG1216	Glycosyl transferase, family 2
DMI79_05635	COG1216	Glycosyl transferase, family 2
DMI79_05650	COG1216	Glycosyl transferase, family 2
DMI79_05655	COG0693	protein deglycase activity
DMI79_05660	COG0508	dehydrogenase complex catalyzes the overall conversion of
DMI79_05665	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DMI79_05670	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DMI79_05680	COG1966	Carbon starvation protein
DMI79_05690	COG3119	arylsulfatase activity
DMI79_05695	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DMI79_05700	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DMI79_05705	COG0195	Participates in both transcription termination and antitermination
DMI79_05710	COG0708	Exodeoxyribonuclease III
DMI79_05715	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DMI79_05720	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DMI79_05725	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
DMI79_05735	COG1716	ATPase activity
DMI79_05735	COG0842	Transport permease protein
DMI79_05735	COG1131	(ABC) transporter
DMI79_05755	COG0724	RNA recognition motif
DMI79_05760	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DMI79_05780	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DMI79_05790	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DMI79_05795	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DMI79_05810	COG1490	D-aminoacyl-tRNA deacylase activity
DMI79_05825	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DMI79_05830	COG1053	succinate dehydrogenase
DMI79_05880	COG1028	Short-chain dehydrogenase reductase Sdr
DMI79_05890	COG0488	(ABC) transporter
DMI79_05900	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DMI79_05910	COG1253	flavin adenine dinucleotide binding
DMI79_05915	COG1028	Short-chain dehydrogenase reductase Sdr
DMI79_05925	COG1073	alpha beta
DMI79_05935	COG0667	Aldo Keto reductase
DMI79_05990	COG2267	carboxylic ester hydrolase activity
DMI79_05995	COG2095	MarC family integral membrane protein
DMI79_06035	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DMI79_06040	COG0488	(ABC) transporter
DMI79_06050	COG0697	spore germination
DMI79_06060	COG0215	cysteine-tRNA ligase activity
DMI79_06070	COG3119	arylsulfatase activity
DMI79_06080	COG0481	GTPase activity
DMI79_06100	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DMI79_06105	COG0085	RNA polymerase activity
DMI79_06110	COG0222	ribosome binding
DMI79_06115	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DMI79_06120	COG0081	regulation of translation
DMI79_06125	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DMI79_06130	COG0250	Participates in transcription elongation, termination and antitermination
DMI79_06145	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DMI79_06155	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DMI79_06165	COG0740	serine-type endopeptidase activity
DMI79_06170	COG0544	peptidyl-prolyl cis-trans isomerase activity
DMI79_06185	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DMI79_06205	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMI79_06250	COG2226	methyltransferase
DMI79_06255	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DMI79_06260	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
DMI79_06275	COG1902	pentaerythritol trinitrate reductase activity
DMI79_06275	COG0446	pyridine nucleotide-disulphide oxidoreductase
DMI79_06285	COG3119	arylsulfatase activity
DMI79_06290	COG0514	ATP-dependent DNA helicase (RecQ)
DMI79_06305	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DMI79_06310	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DMI79_06360	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DMI79_06375	COG1858	cytochrome C peroxidase
DMI79_06380	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DMI79_06385	COG0590	tRNA wobble adenosine to inosine editing
DMI79_06390	COG1940	carbohydrate kinase activity
DMI79_06395	COG2217	Heavy metal translocating P-type atpase
DMI79_06400	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DMI79_06405	COG0237	dephospho-CoA kinase activity
DMI79_06435	COG1363	Peptidase, m42
DMI79_06440	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DMI79_06455	COG0006	proline dipeptidase activity
DMI79_06460	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DMI79_06480	COG5002	protein histidine kinase activity
DMI79_06485	COG0745	RESPONSE REGULATOR receiver
DMI79_06490	COG0129	dihydroxy-acid dehydratase activity
DMI79_06515	COG1368	sulfuric ester hydrolase activity
DMI79_06550	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DMI79_06555	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DMI79_06580	COG0534	Mate efflux family protein
DMI79_06585	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DMI79_06600	COG1876	peptidase activity
DMI79_06645	COG3209	COG3209 Rhs family protein
DMI79_06685	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DMI79_06690	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DMI79_06695	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
DMI79_06700	COG2205	protein histidine kinase activity
DMI79_06710	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DMI79_06720	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DMI79_06730	COG0515	serine threonine protein kinase
DMI79_06735	COG0667	Aldo Keto reductase
DMI79_06740	COG0789	Transcriptional regulator
DMI79_06790	COG0714	Associated with various cellular activities
DMI79_06795	COG2311	Membrane
DMI79_06820	COG1090	epimerase
DMI79_06835	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DMI79_06840	COG1119	ATPase activity
DMI79_06845	COG2186	Transcriptional regulator
DMI79_06870	COG0148	phosphopyruvate hydratase activity
DMI79_06875	COG0436	Aminotransferase
DMI79_06880	COG1477	protein flavinylation
DMI79_06895	COG0227	Belongs to the bacterial ribosomal protein bL28 family
DMI79_06910	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DMI79_06930	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DMI79_06940	COG1199	ATP-dependent helicase activity
DMI79_06945	COG1122	ATPase activity
DMI79_06970	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DMI79_06975	COG0598	Magnesium transport protein CorA
DMI79_06980	COG0359	binds to the 23S rRNA
DMI79_06985	COG0138	bifunctional purine biosynthesis protein purh
DMI79_06990	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DMI79_06995	COG0736	holo-[acyl-carrier-protein] synthase activity
DMI79_07005	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
DMI79_07010	COG3409	Peptidoglycan-binding domain 1 protein
DMI79_07010	COG5632	N-Acetylmuramoyl-L-alanine amidase
DMI79_07015	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DMI79_07025	COG0437	4 iron, 4 sulfur cluster binding
DMI79_07045	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DMI79_07100	COG0284	orotidine-5'-phosphate decarboxylase activity
DMI79_07120	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DMI79_07125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DMI79_07145	COG2003	Belongs to the UPF0758 family
DMI79_07150	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DMI79_07150	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DMI79_07155	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DMI79_07160	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DMI79_07165	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DMI79_07170	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DMI79_07175	COG0322	excinuclease ABC activity
DMI79_07180	COG0811	peptide transport
DMI79_07185	COG0848	biopolymer transport protein
DMI79_07195	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DMI79_07205	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
DMI79_07215	COG1482	cell wall glycoprotein biosynthetic process
DMI79_07225	COG1757	Na H antiporter
DMI79_07230	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DMI79_07235	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
DMI79_07240	COG0505	Belongs to the CarA family
DMI79_07245	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DMI79_07255	COG0070	glutamate synthase
DMI79_07255	COG0069	glutamate synthase activity
DMI79_07255	COG0067	glutamate synthase
DMI79_07265	COG0706	membrane insertase activity
DMI79_07270	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DMI79_07280	COG0230	Belongs to the bacterial ribosomal protein bL34 family
DMI79_07295	COG0657	acetylesterase activity
DMI79_07295	COG2755	lipolytic protein G-D-S-L family
DMI79_07305	COG0676	glucose-6-phosphate 1-epimerase activity
DMI79_07310	COG0259	pyridoxamine-phosphate oxidase activity
DMI79_07325	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DMI79_07380	COG1760	l-serine dehydratase
DMI79_07385	COG3118	belongs to the thioredoxin family
DMI79_07385	COG0492	ferredoxin-NADP+ reductase activity
DMI79_07440	COG1408	metallophosphoesterase
DMI79_07450	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DMI79_07455	COG0545	Peptidyl-prolyl cis-trans isomerase
DMI79_07475	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DMI79_07485	COG0826	peptidase U32
DMI79_07495	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DMI79_07525	COG0581	inorganic phosphate transmembrane transporter activity
DMI79_07530	COG0573	inorganic phosphate transmembrane transporter activity
DMI79_07540	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DMI79_07550	COG2017	converts alpha-aldose to the beta-anomer
DMI79_07565	COG0612	Peptidase, M16
DMI79_07625	COG0233	cytoplasmic translational termination
DMI79_07630	COG0528	UMP kinase activity
DMI79_07635	COG0668	transmembrane transport
DMI79_07640	COG0450	alkyl hydroperoxide reductase
DMI79_07645	COG0733	neurotransmitter:sodium symporter activity
DMI79_07660	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DMI79_07670	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DMI79_07675	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DMI79_07680	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DMI79_07705	COG0842	Transport permease protein
DMI79_07710	COG0842	Transport permease protein
DMI79_07715	COG1131	(ABC) transporter
DMI79_07725	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DMI79_07730	COG1183	phosphatidylcholine synthase activity
DMI79_07740	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DMI79_07750	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DMI79_07755	COG1028	Short-chain dehydrogenase reductase Sdr
DMI79_07775	COG0156	8-amino-7-oxononanoate synthase activity
DMI79_07800	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DMI79_07805	COG0124	histidyl-tRNA synthetase
DMI79_07810	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DMI79_07815	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DMI79_07820	COG0298	carbon dioxide binding
DMI79_07855	COG0443	Heat shock 70 kDa protein
DMI79_07860	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DMI79_07865	COG0459	protein refolding
DMI79_07915	COG0632	four-way junction helicase activity
DMI79_07925	COG0126	phosphoglycerate kinase activity
DMI79_07935	COG1082	Xylose isomerase domain protein TIM barrel
DMI79_07940	COG0515	serine threonine protein kinase
DMI79_07940	COG3064	Membrane
DMI79_07940	COG4991	sh3 domain protein
DMI79_07945	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DMI79_07955	COG2271	Major facilitator Superfamily
DMI79_07970	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DMI79_07980	COG0037	tRNA processing
DMI79_07985	COG0254	rRNA binding
DMI79_08020	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DMI79_08025	COG0039	L-malate dehydrogenase activity
DMI79_08050	COG0778	Nitroreductase
DMI79_08055	COG0564	pseudouridine synthase activity
DMI79_08080	COG1126	abc transporter atp-binding protein
DMI79_08085	COG0765	amino acid transport
DMI79_08095	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DMI79_08100	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DMI79_08125	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DMI79_08150	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DMI79_08155	COG1872	DUF167
DMI79_08160	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DMI79_08165	COG0484	heat shock protein binding
DMI79_08170	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DMI79_08180	COG5434	Belongs to the glycosyl hydrolase 28 family
DMI79_08195	COG0277	FAD linked oxidase domain protein
DMI79_08220	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DMI79_08225	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DMI79_08240	COG0131	Imidazoleglycerol-phosphate dehydratase
DMI79_08245	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DMI79_08250	COG0360	Binds together with S18 to 16S ribosomal RNA
DMI79_08255	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DMI79_08270	COG1686	Belongs to the peptidase S11 family
DMI79_08275	COG0205	6-phosphofructokinase activity
DMI79_08285	COG0428	transporter
DMI79_08290	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DMI79_08305	COG3977	Valine--pyruvate aminotransferase
DMI79_08310	COG1561	YicC-like family, N-terminal region
DMI79_08320	COG3273	potassium ion transport
DMI79_08320	COG0471	metal ion transport
DMI79_08325	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DMI79_08340	COG1575	Belongs to the MenA family. Type 1 subfamily
DMI79_08380	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DMI79_08380	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DMI79_08400	COG0202	RNA polymerase activity
DMI79_08405	COG0203	ribosomal protein L17
DMI79_08410	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DMI79_08420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DMI79_08435	COG2885	chlorophyll binding
DMI79_08495	COG0667	Aldo Keto reductase
DMI79_08500	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
DMI79_08520	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DMI79_08525	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DMI79_08530	COG0134	indole-3-glycerol-phosphate synthase activity
DMI79_08535	COG0135	phosphoribosylanthranilate isomerase activity
DMI79_08545	COG0159	tryptophan synthase activity
DMI79_08565	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DMI79_08570	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DMI79_08580	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DMI79_08615	COG0561	phosphatase activity
DMI79_08620	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DMI79_08625	COG2223	nitrite transmembrane transporter activity
DMI79_08640	COG0556	nucleotide-excision repair
DMI79_08645	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DMI79_08650	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DMI79_08670	COG1074	ATP-dependent DNA helicase activity
DMI79_08680	COG0697	spore germination
DMI79_08690	COG1002	Type II restriction enzyme, methylase subunits
DMI79_08695	COG1061	Type III restriction enzyme res subunit
DMI79_08700	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DMI79_08705	COG2373	Large extracellular alpha-helical protein
DMI79_08710	COG1979	alcohol dehydrogenase
DMI79_08720	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DMI79_08745	COG0372	Belongs to the citrate synthase family
DMI79_08760	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
DMI79_08770	COG1187	pseudouridine synthase activity
DMI79_08780	COG0105	UTP biosynthetic process
DMI79_08785	COG1215	transferase activity, transferring glycosyl groups
DMI79_08790	COG0463	Glycosyl transferase, family 2
DMI79_08800	COG1459	type II secretion system
DMI79_08805	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DMI79_08815	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DMI79_08830	COG0728	peptidoglycan biosynthetic process
DMI79_08835	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
DMI79_08835	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
DMI79_08845	COG1649	PFAM Uncharacterised BCR, COG1649
DMI79_08850	COG1691	(AIR) carboxylase
DMI79_08855	COG0482	sulfurtransferase activity
DMI79_08860	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
DMI79_08865	COG0142	geranyltranstransferase activity
DMI79_08880	COG2151	metal-sulfur cluster biosynthetic enzyme
DMI79_08895	COG1007	ATP synthesis coupled electron transport
DMI79_08900	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DMI79_08910	COG0713	ATP synthesis coupled electron transport
DMI79_08915	COG0839	Belongs to the complex I subunit 6 family
DMI79_08925	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
DMI79_08930	COG1034	ATP synthesis coupled electron transport
DMI79_08935	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
DMI79_08940	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
DMI79_08945	COG0649	NAD binding
DMI79_08955	COG0726	polysaccharide deacetylase
DMI79_08965	COG0307	riboflavin synthase, alpha
DMI79_08975	COG2264	protein methyltransferase activity
DMI79_08985	COG3210	domain, Protein
DMI79_08990	COG1640	4-alpha-glucanotransferase
DMI79_09005	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DMI79_09010	COG1030	water channel activity
DMI79_09015	COG0358	DNA primase activity
DMI79_09020	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DMI79_09025	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
DMI79_09040	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DMI79_09045	COG0793	Belongs to the peptidase S41A family
DMI79_09060	COG1643	Atp-dependent helicase
DMI79_09085	COG1450	Type ii and iii secretion system protein
DMI79_09100	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DMI79_09120	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DMI79_09125	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DMI79_09135	COG0268	Binds directly to 16S ribosomal RNA
DMI79_09140	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DMI79_09145	COG0028	Belongs to the TPP enzyme family
DMI79_09150	COG0305	Participates in initiation and elongation during chromosome replication
DMI79_09265	COG0860	N-Acetylmuramoyl-L-alanine amidase
DMI79_09565	COG0688	phosphatidylethanolamine metabolic process
DMI79_09570	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DMI79_09575	COG0495	leucyl-tRNA aminoacylation
DMI79_09580	COG3119	arylsulfatase activity
DMI79_09595	COG1166	arginine decarboxylase activity
DMI79_09605	COG3250	beta-galactosidase activity
DMI79_09610	COG3250	beta-galactosidase activity
DMI79_09615	COG3250	beta-galactosidase activity
DMI79_09620	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DMI79_09625	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DMI79_09635	COG0205	6-phosphofructokinase activity
DMI79_09670	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
DMI79_09675	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
DMI79_09680	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
DMI79_09695	COG4771	TonB-dependent receptor
DMI79_09715	COG0402	S-adenosylhomocysteine deaminase activity
DMI79_09720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DMI79_09750	COG1294	oxidase, subunit
DMI79_09755	COG1271	oxidase subunit
DMI79_09765	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DMI79_09785	COG1846	Transcriptional regulator
DMI79_09810	COG2949	membrane
DMI79_09840	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DMI79_10035	COG0514	ATP-dependent DNA helicase (RecQ)
DMI79_10205	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DMI79_10210	COG0045	succinate-CoA ligase (ADP-forming) activity
DMI79_10215	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DMI79_10285	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DMI79_10290	COG2205	protein histidine kinase activity
DMI79_10305	COG0113	porphobilinogen synthase activity
DMI79_10315	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DMI79_10335	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DMI79_10380	COG3475	LICD family
DMI79_10385	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
DMI79_10395	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DMI79_10400	COG3475	LICD family
DMI79_10405	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DMI79_10415	COG2166	iron-sulfur cluster assembly
DMI79_10420	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DMI79_10430	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DMI79_10435	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DMI79_10440	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DMI79_10445	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DMI79_10450	COG1131	(ABC) transporter
DMI79_10465	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DMI79_10480	COG1215	transferase activity, transferring glycosyl groups
DMI79_10490	COG2967	ApaG domain
DMI79_10500	COG1522	sequence-specific DNA binding
DMI79_10505	COG0436	Aminotransferase
DMI79_10520	COG0423	glycine-tRNA ligase activity
DMI79_10530	COG0656	L-ascorbic acid biosynthetic process
DMI79_10545	COG2304	oxidoreductase activity
DMI79_10560	COG0714	Associated with various cellular activities
DMI79_10565	COG0154	amidase activity
DMI79_10570	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DMI79_10605	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMI79_10610	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMI79_10620	COG2755	lipolytic protein G-D-S-L family
DMI79_10620	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DMI79_10650	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DMI79_10660	COG0656	L-ascorbic acid biosynthetic process
DMI79_10670	COG0667	Aldo Keto reductase
DMI79_10675	COG1408	metallophosphoesterase
DMI79_10695	COG2249	NAD(P)H dehydrogenase (quinone) activity
DMI79_10700	COG0789	Transcriptional regulator
DMI79_10720	COG0534	Mate efflux family protein
DMI79_10745	COG1091	dTDP-4-dehydrorhamnose reductase activity
DMI79_10760	COG1837	Belongs to the UPF0109 family
DMI79_10770	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DMI79_10775	COG0363	glucosamine-6-phosphate deaminase activity
DMI79_10790	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DMI79_10800	COG1741	Belongs to the pirin family
DMI79_10820	COG1070	Carbohydrate kinase
DMI79_10835	COG0738	Major facilitator superfamily
DMI79_10850	COG1595	DNA-templated transcription, initiation
DMI79_10875	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DMI79_10895	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMI79_10905	COG0232	Belongs to the dGTPase family. Type 2 subfamily
DMI79_10910	COG2132	Multicopper oxidase
DMI79_10915	COG0697	spore germination
DMI79_10920	COG3586	endonuclease activity
DMI79_10935	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DMI79_10940	COG4608	Belongs to the ABC transporter superfamily
DMI79_10945	COG0444	Belongs to the ABC transporter superfamily
DMI79_10950	COG4166	transmembrane transport
DMI79_10955	COG4239	(ABC) transporter, permease
DMI79_10960	COG0601	transmembrane transport
DMI79_10980	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DMI79_10985	COG2759	Belongs to the formate--tetrahydrofolate ligase family
DMI79_10990	COG3738	Protein conserved in bacteria
DMI79_10995	COG0151	Belongs to the GarS family
DMI79_11010	COG0811	peptide transport
DMI79_11020	COG0242	peptide deformylase activity
DMI79_11060	COG2010	Cytochrome c
DMI79_11070	COG3258	Cytochrome c
DMI79_11085	COG3274	enterobacterial common antigen metabolic process
DMI79_11090	COG0538	isocitrate dehydrogenase activity
DMI79_11110	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DMI79_11115	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DMI79_11120	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DMI79_11130	COG0668	transmembrane transport
DMI79_11135	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
DMI79_11135	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DMI79_11140	COG0805	protein transport
DMI79_11145	COG1968	undecaprenyl-diphosphatase activity
DMI79_11165	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DMI79_11175	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DMI79_11185	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DMI79_11195	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DMI79_11205	COG1408	metallophosphoesterase
DMI79_11230	COG4974	Belongs to the 'phage' integrase family
DMI79_11255	COG1454	alcohol dehydrogenase
DMI79_11260	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DMI79_11275	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DMI79_11275	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
DMI79_11280	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DMI79_11315	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DMI79_11325	COG4607	ABC-type enterochelin transport system periplasmic component
DMI79_11330	COG4604	ABC transporter, ATP-binding protein
DMI79_11335	COG4605	iron ion homeostasis
DMI79_11340	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DMI79_11375	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DMI79_11375	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DMI79_11390	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DMI79_11400	COG2195	Cleaves the N-terminal amino acid of tripeptides
DMI79_11420	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DMI79_11440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DMI79_11465	COG0519	Catalyzes the synthesis of GMP from XMP
DMI79_11465	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DMI79_11470	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DMI79_11505	COG0646	methionine synthase
DMI79_11505	COG1410	methionine synthase
DMI79_11510	COG2966	Psort location CytoplasmicMembrane, score
DMI79_11515	COG3610	response to peptide
DMI79_11520	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
DMI79_11540	COG3177	Filamentation induced by cAMP protein fic
DMI79_11545	COG4974	Belongs to the 'phage' integrase family
DMI79_11555	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
DMI79_11565	COG0460	homoserine dehydrogenase
DMI79_11570	COG0527	aspartate kinase activity
DMI79_11585	COG5522	Integral membrane protein (intg_mem_TP0381)
DMI79_11605	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DMI79_11620	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DMI79_11625	COG1194	a g-specific adenine glycosylase
DMI79_11630	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
DMI79_11635	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DMI79_11635	COG0574	Belongs to the PEP-utilizing enzyme family
DMI79_11645	COG0166	Belongs to the GPI family
DMI79_11655	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DMI79_11665	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DMI79_11665	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
DMI79_11700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DMI79_11705	COG2818	Glycosylase
DMI79_11725	COG3033	Beta-eliminating lyase
DMI79_11740	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DMI79_11740	COG0072	phenylalanine-tRNA ligase activity
DMI79_11760	COG0326	Molecular chaperone. Has ATPase activity
DMI79_11765	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DMI79_11775	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DMI79_11780	COG1959	2 iron, 2 sulfur cluster binding
DMI79_11795	COG0352	thiamine-phosphate diphosphorylase activity
DMI79_11800	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DMI79_11825	COG1703	isobutyryl-CoA mutase activity
DMI79_11845	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DMI79_11855	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DMI79_11860	COG0418	dihydroorotase activity
DMI79_11875	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DMI79_11895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DMI79_11910	COG0534	Mate efflux family protein
DMI79_11915	COG0489	protein tyrosine kinase activity
DMI79_11930	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DMI79_11935	COG0339	signal peptide processing
DMI79_11940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DMI79_11950	COG1538	Outer membrane efflux protein
DMI79_11970	COG4112	unkown
DMI79_11990	COG0038	chloride channel
DMI79_12015	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DMI79_12020	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DMI79_12025	COG0586	Pfam SNARE associated Golgi protein
DMI79_12090	COG1518	maintenance of DNA repeat elements
DMI79_12130	COG1012	belongs to the aldehyde dehydrogenase family
DMI79_12150	COG0753	catalase activity
DMI79_12165	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DMI79_12170	COG1592	Rubrerythrin
DMI79_12175	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DMI79_12195	COG0489	protein tyrosine kinase activity
DMI79_12205	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DMI79_12215	COG2244	polysaccharide biosynthetic process
DMI79_12220	COG1215	transferase activity, transferring glycosyl groups
DMI79_12230	COG1216	Glycosyl transferase, family 2
DMI79_12240	COG0438	transferase activity, transferring glycosyl groups
DMI79_12245	COG0438	transferase activity, transferring glycosyl groups
DMI79_12275	COG1216	Glycosyl transferase, family 2
DMI79_12295	COG2755	lipolytic protein G-D-S-L family
DMI79_12295	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DMI79_12315	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DMI79_12325	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DMI79_12325	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DMI79_12330	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
DMI79_12345	COG0281	malic enzyme
DMI79_12345	COG0280	phosphate acetyltransferase
DMI79_12360	COG1472	Belongs to the glycosyl hydrolase 3 family
DMI79_12365	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DMI79_12380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DMI79_12390	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DMI79_12395	COG1063	alcohol dehydrogenase
DMI79_12410	COG0714	Associated with various cellular activities
DMI79_12420	COG0193	aminoacyl-tRNA hydrolase activity
DMI79_12430	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DMI79_12445	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DMI79_12470	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
DMI79_12485	COG0375	protein maturation
DMI79_12510	COG0778	Nitroreductase
DMI79_12515	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DMI79_12540	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DMI79_12540	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DMI79_12560	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DMI79_12565	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DMI79_12570	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DMI79_12610	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DMI79_12615	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DMI79_12630	COG0318	PFAM AMP-dependent synthetase and ligase
DMI79_12660	COG0339	signal peptide processing
DMI79_12675	COG0018	arginyl-trna synthetase
DMI79_12710	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DMI79_12715	COG0653	protein targeting
DMI79_12735	COG0494	nUDIX hydrolase