locus-tag class description C1I88_00005 PF11638 DnaA N-terminal domain C1I88_00005 PF08299 Bacterial dnaA protein helix-turn-helix C1I88_00005 PF00308 Bacterial dnaA protein C1I88_00010 PF00005 ABC transporter C1I88_00030 PF01784 NIF3 (NGG1p interacting factor 3) C1I88_00035 PF00849 RNA pseudouridylate synthase C1I88_00040 PF01842 ACT domain C1I88_00040 PF00800 Prephenate dehydratase C1I88_00040 PF01817 Chorismate mutase type II C1I88_00050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1I88_00050 PF03120 NAD-dependent DNA ligase OB-fold domain C1I88_00050 PF01653 NAD-dependent DNA ligase adenylation domain C1I88_00050 PF00533 BRCA1 C Terminus (BRCT) domain C1I88_00055 PF01066 CDP-alcohol phosphatidyltransferase C1I88_00065 PF00270 DEAD/DEAH box helicase C1I88_00065 PF00271 Helicase conserved C-terminal domain C1I88_00075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1I88_00090 PF07690 Major Facilitator Superfamily C1I88_00095 PF04552 Sigma-54, DNA binding domain C1I88_00095 PF04963 Sigma-54 factor, core binding domain C1I88_00095 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1I88_00105 PF02567 Phenazine biosynthesis-like protein C1I88_00110 PF02659 Putative manganese efflux pump C1I88_00130 PF12002 MgsA AAA+ ATPase C terminal C1I88_00130 PF16193 AAA C-terminal domain C1I88_00130 PF00004 ATPase family associated with various cellular activities (AAA) C1I88_00140 PF01370 NAD dependent epimerase/dehydratase family C1I88_00145 PF01636 Phosphotransferase enzyme family C1I88_00165 PF03129 Anticodon binding domain C1I88_00165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I88_00165 PF09180 Prolyl-tRNA synthetase, C-terminal C1I88_00190 PF13520 Amino acid permease C1I88_00195 PF04960 Glutaminase C1I88_00210 PF01235 Sodium:alanine symporter family C1I88_00220 PF03462 PCRF domain C1I88_00220 PF00472 RF-1 domain C1I88_00225 PF17827 PrmC N-terminal domain C1I88_00225 PF05175 Methyltransferase small domain C1I88_00230 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1I88_00230 PF17764 3′ DNA-binding domain (3′BD) C1I88_00230 PF18074 Primosomal protein N C-terminal domain C1I88_00230 PF00271 Helicase conserved C-terminal domain C1I88_00230 PF04851 Type III restriction enzyme, res subunit C1I88_00235 PF01678 Diaminopimelate epimerase C1I88_00255 PF01209 ubiE/COQ5 methyltransferase family C1I88_00260 PF01554 MatE C1I88_00270 PF08502 LeuA allosteric (dimerisation) domain C1I88_00270 PF00682 HMGL-like C1I88_00275 PF17768 RecJ OB domain C1I88_00275 PF02272 DHHA1 domain C1I88_00275 PF01368 DHH family C1I88_00280 PF07555 beta-N-acetylglucosaminidase C1I88_00280 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_00300 PF00005 ABC transporter C1I88_00305 PF00950 ABC 3 transport family C1I88_00310 PF02151 UvrB/uvrC motif C1I88_00315 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C1I88_00320 PF10431 C-terminal, D2-small domain, of ClpB protein C1I88_00320 PF02861 Clp amino terminal domain, pathogenicity island component C1I88_00320 PF17871 AAA lid domain C1I88_00320 PF07724 AAA domain (Cdc48 subfamily) C1I88_00320 PF00004 ATPase family associated with various cellular activities (AAA) C1I88_00335 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1I88_00340 PF00682 HMGL-like C1I88_00340 PF08502 LeuA allosteric (dimerisation) domain C1I88_00355 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1I88_00355 PF02542 YgbB family C1I88_00365 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C1I88_00370 PF00579 tRNA synthetases class I (W and Y) C1I88_00380 PF13277 YmdB-like protein C1I88_00390 PF00899 ThiF family C1I88_00405 PF00294 pfkB family carbohydrate kinase C1I88_00410 PF00293 NUDIX domain C1I88_00410 PF09297 NADH pyrophosphatase zinc ribbon domain C1I88_00410 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C1I88_00420 PF00155 Aminotransferase class I and II C1I88_00425 PF00069 Protein kinase domain C1I88_00430 PF13614 AAA domain C1I88_00435 PF00069 Protein kinase domain C1I88_00475 PF01119 DNA mismatch repair protein, C-terminal domain C1I88_00475 PF08676 MutL C terminal dimerisation domain C1I88_00490 PF04343 Protein of unknown function, DUF488 C1I88_00500 PF03900 Porphobilinogen deaminase, C-terminal domain C1I88_00500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1I88_00505 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1I88_00505 PF01488 Shikimate / quinate 5-dehydrogenase C1I88_00515 PF02649 Type I GTP cyclohydrolase folE2 C1I88_00520 PF01084 Ribosomal protein S18 C1I88_00525 PF00471 Ribosomal protein L33 C1I88_00530 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1I88_00535 PF00480 ROK family C1I88_00540 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C1I88_00540 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C1I88_00540 PF01189 16S rRNA methyltransferase RsmB/F C1I88_00550 PF00293 NUDIX domain C1I88_00555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I88_00555 PF00529 HlyD membrane-fusion protein of T1SS C1I88_00560 PF00005 ABC transporter C1I88_00560 PF02687 FtsX-like permease family C1I88_00560 PF12704 MacB-like periplasmic core domain C1I88_00565 PF12704 MacB-like periplasmic core domain C1I88_00565 PF00005 ABC transporter C1I88_00565 PF02687 FtsX-like permease family C1I88_00570 PF02321 Outer membrane efflux protein C1I88_00580 PF00873 AcrB/AcrD/AcrF family C1I88_00585 PF00529 HlyD membrane-fusion protein of T1SS C1I88_00585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I88_00595 PF18389 TrmO C-terminal domain C1I88_00595 PF01980 tRNA-methyltransferase O C1I88_00600 PF01979 Amidohydrolase family C1I88_00605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1I88_00605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1I88_00610 PF00156 Phosphoribosyl transferase domain C1I88_00615 PF00731 AIR carboxylase C1I88_00630 PF04371 Porphyromonas-type peptidyl-arginine deiminase C1I88_00640 PF17820 PDZ domain C1I88_00640 PF02163 Peptidase family M50 C1I88_00645 PF01594 AI-2E family transporter C1I88_00650 PF16385 Domain of unknown function C1I88_00650 PF00884 Sulfatase C1I88_00660 PF02421 Ferrous iron transport protein B C1I88_00660 PF04023 FeoA domain C1I88_00660 PF07670 Nucleoside recognition C1I88_00660 PF17910 FeoB cytosolic helical domain C1I88_00660 PF07664 Ferrous iron transport protein B C terminus C1I88_00685 PF00521 DNA gyrase/topoisomerase IV, subunit A C1I88_00940 PF02195 ParB-like nuclease domain C1I88_00940 PF17762 HTH domain found in ParB protein C1I88_00970 PF13593 SBF-like CPA transporter family (DUF4137) C1I88_00975 PF00579 tRNA synthetases class I (W and Y) C1I88_00975 PF01479 S4 domain C1I88_00990 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_00990 PF12911 N-terminal TM domain of oligopeptide transport permease C C1I88_00995 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_01000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1I88_01020 PF03435 Saccharopine dehydrogenase NADP binding domain C1I88_01020 PF16653 Saccharopine dehydrogenase C-terminal domain C1I88_01050 PF02491 SHS2 domain inserted in FTSA C1I88_01060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1I88_01060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1I88_01060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1I88_01060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1I88_01065 PF00664 ABC transporter transmembrane region C1I88_01065 PF00005 ABC transporter C1I88_01070 PF00664 ABC transporter transmembrane region C1I88_01070 PF00005 ABC transporter C1I88_01080 PF02405 Permease MlaE C1I88_01085 PF00005 ABC transporter C1I88_01090 PF02470 MlaD protein C1I88_01110 PF00437 Type II/IV secretion system protein C1I88_01115 PF00437 Type II/IV secretion system protein C1I88_01120 PF09312 SurA N-terminal domain C1I88_01120 PF00639 PPIC-type PPIASE domain C1I88_01135 PF02348 Cytidylyltransferase C1I88_01140 PF00117 Glutamine amidotransferase class-I C1I88_01140 PF06418 CTP synthase N-terminus C1I88_01145 PF00474 Sodium:solute symporter family C1I88_01170 PF13180 PDZ domain C1I88_01175 PF00905 Penicillin binding protein transpeptidase domain C1I88_01175 PF00912 Transglycosylase C1I88_01175 PF17092 Penicillin-binding protein OB-like domain C1I88_01180 PF02646 RmuC family C1I88_01185 PF13419 Haloacid dehalogenase-like hydrolase C1I88_01190 PF00132 Bacterial transferase hexapeptide (six repeats) C1I88_01190 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C1I88_01200 PF12704 MacB-like periplasmic core domain C1I88_01200 PF02687 FtsX-like permease family C1I88_01225 PF04389 Peptidase family M28 C1I88_01230 PF07859 alpha/beta hydrolase fold C1I88_01230 PF13472 GDSL-like Lipase/Acylhydrolase family C1I88_01235 PF00133 tRNA synthetases class I (I, L, M and V) C1I88_01235 PF08264 Anticodon-binding domain of tRNA C1I88_01240 PF01252 Signal peptidase (SPase) II C1I88_01255 PF00266 Aminotransferase class-V C1I88_01260 PF12146 Serine aminopeptidase, S33 C1I88_01265 PF08308 PEGA domain C1I88_01265 PF00069 Protein kinase domain C1I88_01275 PF01245 Ribosomal protein L19 C1I88_01290 PF01039 Carboxyl transferase domain C1I88_01300 PF00364 Biotin-requiring enzyme C1I88_01300 PF02785 Biotin carboxylase C-terminal domain C1I88_01300 PF02436 Conserved carboxylase domain C1I88_01300 PF00682 HMGL-like C1I88_01300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1I88_01300 PF00289 Biotin carboxylase, N-terminal domain C1I88_01305 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C1I88_01310 PF08279 HTH domain C1I88_01310 PF03099 Biotin/lipoate A/B protein ligase family C1I88_01310 PF02237 Biotin protein ligase C terminal domain C1I88_01315 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1I88_01315 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1I88_01325 PF00483 Nucleotidyl transferase C1I88_01330 PF16363 GDP-mannose 4,6 dehydratase C1I88_01335 PF00365 Phosphofructokinase C1I88_01345 PF02934 GatB/GatE catalytic domain C1I88_01345 PF02637 GatB domain C1I88_01350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1I88_01350 PF00205 Thiamine pyrophosphate enzyme, central domain C1I88_01350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1I88_01370 PF00690 Cation transporter/ATPase, N-terminus C1I88_01370 PF00689 Cation transporting ATPase, C-terminus C1I88_01375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I88_01375 PF00529 HlyD membrane-fusion protein of T1SS C1I88_01380 PF00873 AcrB/AcrD/AcrF family C1I88_01385 PF00939 Sodium:sulfate symporter transmembrane region C1I88_01395 PF08543 Phosphomethylpyrimidine kinase C1I88_01460 PF01327 Polypeptide deformylase C1I88_01465 PF08240 Alcohol dehydrogenase GroES-like domain C1I88_01465 PF00107 Zinc-binding dehydrogenase C1I88_01470 PF00343 Carbohydrate phosphorylase C1I88_01470 PF11897 Protein of unknown function (DUF3417) C1I88_01475 PF00027 Cyclic nucleotide-binding domain C1I88_01475 PF00520 Ion transport protein C1I88_01480 PF03960 ArsC family C1I88_01485 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1I88_01485 PF00753 Metallo-beta-lactamase superfamily C1I88_01485 PF10996 Beta-Casp domain C1I88_01505 PF01479 S4 domain C1I88_01505 PF00849 RNA pseudouridylate synthase C1I88_01515 PF01746 tRNA (Guanine-1)-methyltransferase C1I88_01520 PF03462 PCRF domain C1I88_01520 PF00472 RF-1 domain C1I88_01530 PF00575 S1 RNA binding domain C1I88_01580 PF02548 Ketopantoate hydroxymethyltransferase C1I88_01585 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1I88_01590 PF05173 Dihydrodipicolinate reductase, C-terminus C1I88_01590 PF01113 Dihydrodipicolinate reductase, N-terminus C1I88_01595 PF00701 Dihydrodipicolinate synthetase family C1I88_01635 PF00578 AhpC/TSA family C1I88_01660 PF02130 Uncharacterized protein family UPF0054 C1I88_01660 PF07883 Cupin domain C1I88_01665 PF07698 7TM receptor with intracellular HD hydrolase C1I88_01665 PF07697 7TM-HD extracellular C1I88_01665 PF01966 HD domain C1I88_01670 PF02504 Fatty acid synthesis protein C1I88_01675 PF01783 Ribosomal L32p protein family C1I88_01685 PF01230 HIT domain C1I88_01690 PF03481 Putative GTP-binding controlling metal-binding C1I88_01690 PF01300 Telomere recombination C1I88_01695 PF01202 Shikimate kinase C1I88_01700 PF00886 Ribosomal protein S16 C1I88_01710 PF02899 Phage integrase, N-terminal SAM-like domain C1I88_01710 PF00589 Phage integrase family C1I88_01725 PF02699 Preprotein translocase subunit C1I88_01735 PF02390 Putative methyltransferase C1I88_01745 PF05036 Sporulation related domain C1I88_01745 PF03330 Lytic transglycolase C1I88_01750 PF11858 Domain of unknown function (DUF3378) C1I88_01750 PF01351 Ribonuclease HII C1I88_01755 PF00216 Bacterial DNA-binding protein C1I88_01790 PF01618 MotA/TolQ/ExbB proton channel family C1I88_01810 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I88_01810 PF00703 Glycosyl hydrolases family 2 C1I88_01810 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1I88_01810 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I88_01810 PF16355 Domain of unknown function (DUF4982) C1I88_01815 PF08264 Anticodon-binding domain of tRNA C1I88_01815 PF00133 tRNA synthetases class I (I, L, M and V) C1I88_01815 PF10458 Valyl tRNA synthetase tRNA binding arm C1I88_01830 PF00238 Ribosomal protein L14p/L23e C1I88_01835 PF00366 Ribosomal protein S17 C1I88_01840 PF00831 Ribosomal L29 protein C1I88_01845 PF00252 Ribosomal protein L16p/L10e C1I88_01850 PF07650 KH domain C1I88_01850 PF00189 Ribosomal protein S3, C-terminal domain C1I88_01855 PF00237 Ribosomal protein L22p/L17e C1I88_01865 PF00203 Ribosomal protein S19 C1I88_01870 PF00181 Ribosomal Proteins L2, RNA binding domain C1I88_01870 PF03947 Ribosomal Proteins L2, C-terminal domain C1I88_01875 PF00276 Ribosomal protein L23 C1I88_01880 PF00573 Ribosomal protein L4/L1 family C1I88_01885 PF00297 Ribosomal protein L3 C1I88_01890 PF00338 Ribosomal protein S10p/S20e C1I88_01895 PF03144 Elongation factor Tu domain 2 C1I88_01895 PF00009 Elongation factor Tu GTP binding domain C1I88_01895 PF03764 Elongation factor G, domain IV C1I88_01895 PF14492 Elongation Factor G, domain II C1I88_01895 PF00679 Elongation factor G C-terminus C1I88_01900 PF00177 Ribosomal protein S7p/S5e C1I88_01905 PF00164 Ribosomal protein S12/S23 C1I88_01910 PF01676 Metalloenzyme superfamily C1I88_01910 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1I88_01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_01920 PF00512 His Kinase A (phospho-acceptor) domain C1I88_01920 PF00989 PAS fold C1I88_01925 PF00158 Sigma-54 interaction domain C1I88_01925 PF00072 Response regulator receiver domain C1I88_01925 PF02954 Bacterial regulatory protein, Fis family C1I88_01935 PF02609 Exonuclease VII small subunit C1I88_01940 PF02779 Transketolase, pyrimidine binding domain C1I88_01940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1I88_01940 PF02780 Transketolase, C-terminal domain C1I88_01955 PF03739 Lipopolysaccharide export system permease LptF/LptG C1I88_01965 PF00005 ABC transporter C1I88_01965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1I88_01985 PF12704 MacB-like periplasmic core domain C1I88_01985 PF02687 FtsX-like permease family C1I88_01985 PF00005 ABC transporter C1I88_01995 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1I88_01995 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1I88_02030 PF02683 Cytochrome C biogenesis protein transmembrane region C1I88_02030 PF11412 Disulphide bond corrector protein DsbC C1I88_02045 PF05188 MutS domain II C1I88_02045 PF01624 MutS domain I C1I88_02045 PF05192 MutS domain III C1I88_02045 PF05190 MutS family domain IV C1I88_02045 PF00488 MutS domain V C1I88_02075 PF00378 Enoyl-CoA hydratase/isomerase C1I88_02115 PF00005 ABC transporter C1I88_02130 PF12857 TOBE-like domain C1I88_02130 PF00005 ABC transporter C1I88_02140 PF00106 short chain dehydrogenase C1I88_02155 PF00158 Sigma-54 interaction domain C1I88_02155 PF02954 Bacterial regulatory protein, Fis family C1I88_02155 PF01590 GAF domain C1I88_02160 PF00654 Voltage gated chloride channel C1I88_02170 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_02170 PF07691 PA14 domain C1I88_02170 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_02190 PF00282 Pyridoxal-dependent decarboxylase conserved domain C1I88_02200 PF02811 PHP domain C1I88_02200 PF01336 OB-fold nucleic acid binding domain C1I88_02200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1I88_02200 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1I88_02200 PF14579 Helix-hairpin-helix motif C1I88_02205 PF01180 Dihydroorotate dehydrogenase C1I88_02210 PF02581 Thiamine monophosphate synthase C1I88_02230 PF03471 Transporter associated domain C1I88_02230 PF00571 CBS domain C1I88_02230 PF01595 Cyclin M transmembrane N-terminal domain C1I88_02235 PF00571 CBS domain C1I88_02235 PF01595 Cyclin M transmembrane N-terminal domain C1I88_02235 PF03471 Transporter associated domain C1I88_02245 PF01138 3' exoribonuclease family, domain 1 C1I88_02245 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1I88_02245 PF00575 S1 RNA binding domain C1I88_02245 PF03725 3' exoribonuclease family, domain 2 C1I88_02245 PF00013 KH domain C1I88_02250 PF00312 Ribosomal protein S15 C1I88_02255 PF14602 Hexapeptide repeat of succinyl-transferase C1I88_02255 PF12464 Maltose acetyltransferase C1I88_02280 PF01416 tRNA pseudouridine synthase C1I88_02285 PF01467 Cytidylyltransferase-like C1I88_02305 PF07963 Prokaryotic N-terminal methylation motif C1I88_02305 PF14245 Type IV pilin PilA C1I88_02310 PF03725 3' exoribonuclease family, domain 2 C1I88_02310 PF01138 3' exoribonuclease family, domain 1 C1I88_02320 PF07691 PA14 domain C1I88_02320 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_02320 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_02330 PF02457 DisA bacterial checkpoint controller nucleotide-binding C1I88_02345 PF00005 ABC transporter C1I88_02350 PF02569 Pantoate-beta-alanine ligase C1I88_02360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1I88_02360 PF00132 Bacterial transferase hexapeptide (six repeats) C1I88_02365 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_02370 PF00005 ABC transporter C1I88_02385 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_02385 PF07555 beta-N-acetylglucosaminidase C1I88_02395 PF13580 SIS domain C1I88_02400 PF01467 Cytidylyltransferase-like C1I88_02400 PF00294 pfkB family carbohydrate kinase C1I88_02410 PF01165 Ribosomal protein S21 C1I88_02415 PF00202 Aminotransferase class-III C1I88_02430 PF00083 Sugar (and other) transporter C1I88_02440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C1I88_02440 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1I88_02445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1I88_02445 PF00925 GTP cyclohydrolase II C1I88_02450 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1I88_02455 PF01029 NusB family C1I88_02460 PF02881 SRP54-type protein, helical bundle domain C1I88_02460 PF00448 SRP54-type protein, GTPase domain C1I88_02465 PF04055 Radical SAM superfamily C1I88_02470 PF00772 DnaB-like helicase N terminal domain C1I88_02470 PF03796 DnaB-like helicase C terminal domain C1I88_02480 PF04191 Phospholipid methyltransferase C1I88_02485 PF18146 Damage-inducible protein CinA KH domain C1I88_02485 PF02464 Competence-damaged protein C1I88_02485 PF00994 Probable molybdopterin binding domain C1I88_02490 PF02887 Pyruvate kinase, alpha/beta domain C1I88_02490 PF00224 Pyruvate kinase, barrel domain C1I88_02490 PF00391 PEP-utilising enzyme, mobile domain C1I88_02495 PF00583 Acetyltransferase (GNAT) family C1I88_02520 PF01479 S4 domain C1I88_02520 PF00163 Ribosomal protein S4/S9 N-terminal domain C1I88_02525 PF00411 Ribosomal protein S11 C1I88_02530 PF00416 Ribosomal protein S13/S18 C1I88_02535 PF08331 Domain of unknown function (DUF1730) C1I88_02550 PF02481 DNA recombination-mediator protein A C1I88_02550 PF17782 DprA winged helix domain C1I88_02555 PF07943 Penicillin-binding protein 5, C-terminal domain C1I88_02555 PF00768 D-alanyl-D-alanine carboxypeptidase C1I88_02560 PF01926 50S ribosome-binding GTPase C1I88_02560 PF06071 Protein of unknown function (DUF933) C1I88_02570 PF01597 Glycine cleavage H-protein C1I88_02575 PF02347 Glycine cleavage system P-protein C1I88_02590 PF00884 Sulfatase C1I88_02590 PF16385 Domain of unknown function C1I88_02595 PF00271 Helicase conserved C-terminal domain C1I88_02595 PF00270 DEAD/DEAH box helicase C1I88_02595 PF03880 DbpA RNA binding domain C1I88_02615 PF07681 DoxX C1I88_02620 PF02769 AIR synthase related protein, C-terminal domain C1I88_02620 PF00586 AIR synthase related protein, N-terminal domain C1I88_02625 PF00156 Phosphoribosyl transferase domain C1I88_02630 PF04542 Sigma-70 region 2 C1I88_02630 PF08281 Sigma-70, region 4 C1I88_02650 PF02441 Flavoprotein C1I88_02670 PF03976 Polyphosphate kinase 2 (PPK2) C1I88_02675 PF00455 DeoR C terminal sensor domain C1I88_02675 PF08220 DeoR-like helix-turn-helix domain C1I88_02685 PF00266 Aminotransferase class-V C1I88_02690 PF02441 Flavoprotein C1I88_02690 PF04127 DNA / pantothenate metabolism flavoprotein C1I88_02695 PF03193 RsgA GTPase C1I88_02725 PF03976 Polyphosphate kinase 2 (PPK2) C1I88_02740 PF08305 NPCBM/NEW2 domain C1I88_02750 PF12146 Serine aminopeptidase, S33 C1I88_02755 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1I88_02765 PF01016 Ribosomal L27 protein C1I88_02770 PF01475 Ferric uptake regulator family C1I88_02775 PF00005 ABC transporter C1I88_02780 PF01458 Uncharacterized protein family (UPF0051) C1I88_02785 PF01458 Uncharacterized protein family (UPF0051) C1I88_02800 PF00884 Sulfatase C1I88_02805 PF04055 Radical SAM superfamily C1I88_02805 PF06968 Biotin and Thiamin Synthesis associated domain C1I88_02810 PF00202 Aminotransferase class-III C1I88_02835 PF00535 Glycosyl transferase family 2 C1I88_02845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1I88_02865 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1I88_02865 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1I88_02870 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1I88_02870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I88_02875 PF00231 ATP synthase C1I88_02880 PF00306 ATP synthase alpha/beta chain, C terminal domain C1I88_02880 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1I88_02880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I88_02885 PF00213 ATP synthase delta (OSCP) subunit C1I88_02890 PF00430 ATP synthase B/B' CF(0) C1I88_02895 PF00137 ATP synthase subunit C C1I88_02900 PF00119 ATP synthase A chain C1I88_02910 PF00905 Penicillin binding protein transpeptidase domain C1I88_02910 PF03717 Penicillin-binding Protein dimerisation domain C1I88_02955 PF00899 ThiF family C1I88_02960 PF00571 CBS domain C1I88_02960 PF01380 SIS domain C1I88_02980 PF06426 Serine acetyltransferase, N-terminal C1I88_02980 PF00132 Bacterial transferase hexapeptide (six repeats) C1I88_02985 PF00171 Aldehyde dehydrogenase family C1I88_02990 PF01472 PUA domain C1I88_02990 PF00696 Amino acid kinase family C1I88_03000 PF02780 Transketolase, C-terminal domain C1I88_03000 PF00456 Transketolase, thiamine diphosphate binding domain C1I88_03000 PF02779 Transketolase, pyrimidine binding domain C1I88_03005 PF03449 Transcription elongation factor, N-terminal C1I88_03005 PF01272 Transcription elongation factor, GreA/GreB, C-term C1I88_03015 PF01259 SAICAR synthetase C1I88_03025 PF00586 AIR synthase related protein, N-terminal domain C1I88_03025 PF02769 AIR synthase related protein, C-terminal domain C1I88_03025 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1I88_03040 PF05343 M42 glutamyl aminopeptidase C1I88_03050 PF00703 Glycosyl hydrolases family 2 C1I88_03050 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I88_03050 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I88_03050 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C1I88_03060 PF10150 Ribonuclease E/G family C1I88_03060 PF00575 S1 RNA binding domain C1I88_03080 PF02472 Biopolymer transport protein ExbD/TolR C1I88_03095 PF00730 HhH-GPD superfamily base excision DNA repair protein C1I88_03115 PF00218 Indole-3-glycerol phosphate synthase C1I88_03120 PF02021 Uncharacterised protein family UPF0102 C1I88_03125 PF01351 Ribonuclease HII C1I88_03130 PF01595 Cyclin M transmembrane N-terminal domain C1I88_03130 PF00571 CBS domain C1I88_03130 PF03471 Transporter associated domain C1I88_03140 PF00253 Ribosomal protein S14p/S29e C1I88_03155 PF00764 Arginosuccinate synthase C1I88_03160 PF00884 Sulfatase C1I88_03165 PF01189 16S rRNA methyltransferase RsmB/F C1I88_03165 PF01029 NusB family C1I88_03170 PF00121 Triosephosphate isomerase C1I88_03185 PF00884 Sulfatase C1I88_03215 PF03819 MazG nucleotide pyrophosphohydrolase domain C1I88_03225 PF00570 HRDC domain C1I88_03225 PF01612 3'-5' exonuclease C1I88_03235 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C1I88_03245 PF05193 Peptidase M16 inactive domain C1I88_03245 PF00675 Insulinase (Peptidase family M16) C1I88_03250 PF02677 Epoxyqueuosine reductase QueH C1I88_03255 PF03466 LysR substrate binding domain C1I88_03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1I88_03260 PF02219 Methylenetetrahydrofolate reductase C1I88_03265 PF01717 Cobalamin-independent synthase, Catalytic domain C1I88_03265 PF08267 Cobalamin-independent synthase, N-terminal domain C1I88_03285 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C1I88_03285 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1I88_03290 PF03734 L,D-transpeptidase catalytic domain C1I88_03315 PF00291 Pyridoxal-phosphate dependent enzyme C1I88_03315 PF00585 C-terminal regulatory domain of Threonine dehydratase C1I88_03320 PF02545 Maf-like protein C1I88_03325 PF01926 50S ribosome-binding GTPase C1I88_03325 PF16360 GTP-binding GTPase Middle Region C1I88_03325 PF13167 GTP-binding GTPase N-terminal C1I88_03330 PF00069 Protein kinase domain C1I88_03345 PF00586 AIR synthase related protein, N-terminal domain C1I88_03345 PF02769 AIR synthase related protein, C-terminal domain C1I88_03355 PF02224 Cytidylate kinase C1I88_03365 PF02463 RecF/RecN/SMC N terminal domain C1I88_03375 PF00035 Double-stranded RNA binding motif C1I88_03375 PF14622 Ribonuclease-III-like C1I88_03390 PF03372 Endonuclease/Exonuclease/phosphatase family C1I88_03395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1I88_03410 PF01502 Phosphoribosyl-AMP cyclohydrolase C1I88_03415 PF09115 DNA polymerase III, delta subunit, C terminal C1I88_03430 PF02142 MGS-like domain C1I88_03430 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1I88_03430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1I88_03445 PF08241 Methyltransferase domain C1I88_03450 PF00795 Carbon-nitrogen hydrolase C1I88_03450 PF02540 NAD synthase C1I88_03455 PF00893 Small Multidrug Resistance protein C1I88_03465 PF13859 BNR repeat-like domain C1I88_03490 PF03793 PASTA domain C1I88_03490 PF00069 Protein kinase domain C1I88_03530 PF03747 ADP-ribosylglycohydrolase C1I88_03555 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1I88_03555 PF17864 RuvB AAA lid domain C1I88_03555 PF05491 RuvB C-terminal winged helix domain C1I88_03560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1I88_03560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1I88_03565 PF00667 FAD binding domain C1I88_03565 PF00258 Flavodoxin C1I88_03565 PF00175 Oxidoreductase NAD-binding domain C1I88_03575 PF00535 Glycosyl transferase family 2 C1I88_03580 PF00535 Glycosyl transferase family 2 C1I88_03605 PF00534 Glycosyl transferases group 1 C1I88_03615 PF01757 Acyltransferase family C1I88_03635 PF12631 MnmE helical domain C1I88_03635 PF10396 GTP-binding protein TrmE N-terminus C1I88_03635 PF01926 50S ribosome-binding GTPase C1I88_03645 PF03458 UPF0126 domain C1I88_03650 PF10996 Beta-Casp domain C1I88_03650 PF00753 Metallo-beta-lactamase superfamily C1I88_03650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1I88_03655 PF02381 MraZ protein, putative antitoxin-like C1I88_03660 PF01795 MraW methylase family C1I88_03670 PF03793 PASTA domain C1I88_03670 PF00905 Penicillin binding protein transpeptidase domain C1I88_03670 PF03717 Penicillin-binding Protein dimerisation domain C1I88_03675 PF08245 Mur ligase middle domain C1I88_03675 PF02875 Mur ligase family, glutamate ligase domain C1I88_03675 PF01225 Mur ligase family, catalytic domain C1I88_03680 PF01225 Mur ligase family, catalytic domain C1I88_03680 PF02875 Mur ligase family, glutamate ligase domain C1I88_03680 PF08245 Mur ligase middle domain C1I88_03685 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1I88_03685 PF00953 Glycosyl transferase family 4 C1I88_03690 PF02875 Mur ligase family, glutamate ligase domain C1I88_03690 PF08245 Mur ligase middle domain C1I88_03700 PF05257 CHAP domain C1I88_03700 PF01476 LysM domain C1I88_03705 PF01098 Cell cycle protein C1I88_03710 PF04101 Glycosyltransferase family 28 C-terminal domain C1I88_03710 PF03033 Glycosyltransferase family 28 N-terminal domain C1I88_03715 PF08245 Mur ligase middle domain C1I88_03715 PF01225 Mur ligase family, catalytic domain C1I88_03715 PF02875 Mur ligase family, glutamate ligase domain C1I88_03720 PF07478 D-ala D-ala ligase C-terminus C1I88_03720 PF01820 D-ala D-ala ligase N-terminus C1I88_03730 PF00154 recA bacterial DNA recombination protein C1I88_03735 PF01520 N-acetylmuramoyl-L-alanine amidase C1I88_03740 PF03099 Biotin/lipoate A/B protein ligase family C1I88_03745 PF00330 Aconitase family (aconitate hydratase) C1I88_03750 PF00694 Aconitase C-terminal domain C1I88_03760 PF17820 PDZ domain C1I88_03760 PF13180 PDZ domain C1I88_03770 PF01761 3-dehydroquinate synthase C1I88_03785 PF00005 ABC transporter C1I88_03785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1I88_03790 PF00889 Elongation factor TS C1I88_03805 PF00793 DAHP synthetase I family C1I88_03820 PF00005 ABC transporter C1I88_03820 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1I88_03830 PF01225 Mur ligase family, catalytic domain C1I88_03830 PF08245 Mur ligase middle domain C1I88_03830 PF02875 Mur ligase family, glutamate ligase domain C1I88_03835 PF00691 OmpA family C1I88_03840 PF00580 UvrD/REP helicase N-terminal domain C1I88_03840 PF13361 UvrD-like helicase C-terminal domain C1I88_03855 PF00152 tRNA synthetases class II (D, K and N) C1I88_03855 PF01336 OB-fold nucleic acid binding domain C1I88_03865 PF00085 Thioredoxin C1I88_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1I88_03915 PF03466 LysR substrate binding domain C1I88_03920 PF03601 Conserved hypothetical protein 698 C1I88_03925 PF00266 Aminotransferase class-V C1I88_03940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1I88_03940 PF01842 ACT domain C1I88_03940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1I88_03950 PF04055 Radical SAM superfamily C1I88_03955 PF07497 Rho termination factor, RNA-binding domain C1I88_03955 PF07498 Rho termination factor, N-terminal domain C1I88_03955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I88_03960 PF01709 Transcriptional regulator C1I88_03965 PF01545 Cation efflux family C1I88_03965 PF16916 Dimerisation domain of Zinc Transporter C1I88_03970 PF02254 TrkA-N domain C1I88_03970 PF00999 Sodium/hydrogen exchanger family C1I88_03980 PF02547 Queuosine biosynthesis protein C1I88_03985 PF12127 SigmaW regulon antibacterial C1I88_03995 PF05690 Thiazole biosynthesis protein ThiG C1I88_04000 PF13520 Amino acid permease C1I88_04015 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1I88_04015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1I88_04020 PF01116 Fructose-bisphosphate aldolase class-II C1I88_04030 PF01063 Amino-transferase class IV C1I88_04035 PF00722 Glycosyl hydrolases family 16 C1I88_04040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1I88_04040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1I88_04055 PF01018 GTP1/OBG C1I88_04055 PF01926 50S ribosome-binding GTPase C1I88_04060 PF01636 Phosphotransferase enzyme family C1I88_04150 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1I88_04155 PF00478 IMP dehydrogenase / GMP reductase domain C1I88_04155 PF00571 CBS domain C1I88_04160 PF02540 NAD synthase C1I88_04160 PF00958 GMP synthase C terminal domain C1I88_04160 PF00117 Glutamine amidotransferase class-I C1I88_04190 PF07669 Eco57I restriction-modification methylase C1I88_04195 PF02384 N-6 DNA Methylase C1I88_04215 PF12464 Maltose acetyltransferase C1I88_04215 PF14602 Hexapeptide repeat of succinyl-transferase C1I88_04220 PF13419 Haloacid dehalogenase-like hydrolase C1I88_04245 PF00793 DAHP synthetase I family C1I88_04250 PF07963 Prokaryotic N-terminal methylation motif C1I88_04250 PF00114 Pilin (bacterial filament) C1I88_04260 PF02261 Aspartate decarboxylase C1I88_04265 PF06574 FAD synthetase C1I88_04265 PF01687 Riboflavin kinase C1I88_04270 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1I88_04270 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1I88_04285 PF00149 Calcineurin-like phosphoesterase C1I88_04290 PF01501 Glycosyl transferase family 8 C1I88_04290 PF08759 Glycosyltransferase GT-D fold C1I88_04295 PF00535 Glycosyl transferase family 2 C1I88_04295 PF01501 Glycosyl transferase family 8 C1I88_04305 PF01370 NAD dependent epimerase/dehydratase family C1I88_04310 PF00535 Glycosyl transferase family 2 C1I88_04330 PF01757 Acyltransferase family C1I88_04350 PF02080 TrkA-C domain C1I88_04350 PF03600 Citrate transporter C1I88_04385 PF01301 Glycosyl hydrolases family 35 C1I88_04390 PF00300 Histidine phosphatase superfamily (branch 1) C1I88_04395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1I88_04395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1I88_04400 PF01757 Acyltransferase family C1I88_04405 PF07690 Major Facilitator Superfamily C1I88_04410 PF03061 Thioesterase superfamily C1I88_04430 PF00565 Staphylococcal nuclease homologue C1I88_04445 PF02195 ParB-like nuclease domain C1I88_04450 PF01507 Phosphoadenosine phosphosulfate reductase family C1I88_04450 PF11922 Domain of unknown function (DUF3440) C1I88_04465 PF00180 Isocitrate/isopropylmalate dehydrogenase C1I88_04480 PF13335 Magnesium chelatase, subunit ChlI C-terminal C1I88_04480 PF01078 Magnesium chelatase, subunit ChlI C1I88_04490 PF01053 Cys/Met metabolism PLP-dependent enzyme C1I88_04500 PF13186 Iron-sulfur cluster-binding domain C1I88_04500 PF04055 Radical SAM superfamily C1I88_04515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1I88_04515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1I88_04520 PF02660 Glycerol-3-phosphate acyltransferase C1I88_04530 PF01336 OB-fold nucleic acid binding domain C1I88_04530 PF00152 tRNA synthetases class II (D, K and N) C1I88_04550 PF01638 HxlR-like helix-turn-helix C1I88_04560 PF00977 Histidine biosynthesis protein C1I88_04570 PF02386 Cation transport protein C1I88_04580 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C1I88_04580 PF11898 Domain of unknown function (DUF3418) C1I88_04580 PF00270 DEAD/DEAH box helicase C1I88_04580 PF00271 Helicase conserved C-terminal domain C1I88_04580 PF04408 Helicase associated domain (HA2) C1I88_04585 PF10369 Small subunit of acetolactate synthase C1I88_04590 PF13180 PDZ domain C1I88_04590 PF00595 PDZ domain C1I88_04600 PF01134 Glucose inhibited division protein A C1I88_04600 PF13932 GidA associated domain C1I88_04610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1I88_04610 PF01872 RibD C-terminal domain C1I88_04615 PF00132 Bacterial transferase hexapeptide (six repeats) C1I88_04615 PF00483 Nucleotidyl transferase C1I88_04625 PF02767 DNA polymerase III beta subunit, central domain C1I88_04625 PF00712 DNA polymerase III beta subunit, N-terminal domain C1I88_04625 PF02768 DNA polymerase III beta subunit, C-terminal domain C1I88_04650 PF00877 NlpC/P60 family C1I88_04650 PF01476 LysM domain C1I88_04655 PF01026 TatD related DNase C1I88_04665 PF02929 Beta galactosidase small chain C1I88_04665 PF16353 Domain of unknown function(DUF4981) C1I88_04665 PF00703 Glycosyl hydrolases family 2 C1I88_04665 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I88_04665 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I88_04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_04680 PF13492 GAF domain C1I88_04680 PF00512 His Kinase A (phospho-acceptor) domain C1I88_04680 PF02702 Osmosensitive K+ channel His kinase sensor domain C1I88_04680 PF13493 Domain of unknown function (DUF4118) C1I88_04685 PF00486 Transcriptional regulatory protein, C terminal C1I88_04685 PF00072 Response regulator receiver domain C1I88_04695 PF03814 Potassium-transporting ATPase A subunit C1I88_04705 PF02669 K+-transporting ATPase, c chain C1I88_04725 PF07724 AAA domain (Cdc48 subfamily) C1I88_04725 PF00004 ATPase family associated with various cellular activities (AAA) C1I88_04725 PF17871 AAA lid domain C1I88_04725 PF02861 Clp amino terminal domain, pathogenicity island component C1I88_04725 PF10431 C-terminal, D2-small domain, of ClpB protein C1I88_04770 PF03477 ATP cone domain C1I88_04780 PF00916 Sulfate permease family C1I88_04780 PF01740 STAS domain C1I88_04785 PF14698 Argininosuccinate lyase C-terminal C1I88_04785 PF00206 Lyase C1I88_04800 PF00113 Enolase, C-terminal TIM barrel domain C1I88_04800 PF03952 Enolase, N-terminal domain C1I88_04805 PF01261 Xylose isomerase-like TIM barrel C1I88_04810 PF13088 BNR repeat-like domain C1I88_04810 PF00754 F5/8 type C domain C1I88_04810 PF02973 Sialidase, N-terminal domain C1I88_04815 PF01336 OB-fold nucleic acid binding domain C1I88_04815 PF01966 HD domain C1I88_04825 PF04055 Radical SAM superfamily C1I88_04825 PF00919 Uncharacterized protein family UPF0004 C1I88_04825 PF01938 TRAM domain C1I88_04830 PF01938 TRAM domain C1I88_04830 PF05958 tRNA (Uracil-5-)-methyltransferase C1I88_04850 PF00216 Bacterial DNA-binding protein C1I88_04855 PF16874 Glycosyl hydrolase family 36 C-terminal domain C1I88_04855 PF16875 Glycosyl hydrolase family 36 N-terminal domain C1I88_04885 PF06826 Predicted Permease Membrane Region C1I88_04885 PF02080 TrkA-C domain C1I88_04895 PF00989 PAS fold C1I88_04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_04895 PF00512 His Kinase A (phospho-acceptor) domain C1I88_04900 PF00939 Sodium:sulfate symporter transmembrane region C1I88_04925 PF08019 Phosphoethanolamine transferase EptA/EptB C1I88_04925 PF00884 Sulfatase C1I88_04935 PF02915 Rubrerythrin C1I88_04945 PF05343 M42 glutamyl aminopeptidase C1I88_04950 PF07691 PA14 domain C1I88_04950 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_04950 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_04960 PF00245 Alkaline phosphatase C1I88_04965 PF01741 Large-conductance mechanosensitive channel, MscL C1I88_04970 PF00202 Aminotransferase class-III C1I88_04985 PF00722 Glycosyl hydrolases family 16 C1I88_04990 PF00403 Heavy-metal-associated domain C1I88_04995 PF02463 RecF/RecN/SMC N terminal domain C1I88_05000 PF12706 Beta-lactamase superfamily domain C1I88_05000 PF03099 Biotin/lipoate A/B protein ligase family C1I88_05005 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1I88_05035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1I88_05035 PF02817 e3 binding domain C1I88_05035 PF00364 Biotin-requiring enzyme C1I88_05040 PF02780 Transketolase, C-terminal domain C1I88_05040 PF02779 Transketolase, pyrimidine binding domain C1I88_05045 PF02779 Transketolase, pyrimidine binding domain C1I88_05045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1I88_05045 PF02780 Transketolase, C-terminal domain C1I88_05055 PF13411 MerR HTH family regulatory protein C1I88_05060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I88_05060 PF00529 HlyD membrane-fusion protein of T1SS C1I88_05065 PF00873 AcrB/AcrD/AcrF family C1I88_05070 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1I88_05070 PF07548 Chlamydia polymorphic membrane protein middle domain C1I88_05070 PF03797 Autotransporter beta-domain C1I88_05105 PF01751 Toprim domain C1I88_05105 PF01131 DNA topoisomerase C1I88_05130 PF01476 LysM domain C1I88_05130 PF01471 Putative peptidoglycan binding domain C1I88_05130 PF01510 N-acetylmuramoyl-L-alanine amidase C1I88_05135 PF00694 Aconitase C-terminal domain C1I88_05135 PF00330 Aconitase family (aconitate hydratase) C1I88_05150 PF01625 Peptide methionine sulfoxide reductase C1I88_05150 PF01641 SelR domain C1I88_05165 PF01139 tRNA-splicing ligase RtcB C1I88_05175 PF07690 Major Facilitator Superfamily C1I88_05185 PF01923 Cobalamin adenosyltransferase C1I88_05195 PF00773 RNB domain C1I88_05195 PF17876 Cold shock domain C1I88_05195 PF00575 S1 RNA binding domain C1I88_05195 PF08206 Ribonuclease B OB domain C1I88_05205 PF01136 Peptidase family U32 C1I88_05205 PF12392 Collagenase C1I88_05210 PF08245 Mur ligase middle domain C1I88_05210 PF02875 Mur ligase family, glutamate ligase domain C1I88_05225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1I88_05230 PF00271 Helicase conserved C-terminal domain C1I88_05230 PF00176 SNF2 family N-terminal domain C1I88_05230 PF12419 SNF2 Helicase protein C1I88_05235 PF00149 Calcineurin-like phosphoesterase C1I88_05235 PF02872 5'-nucleotidase, C-terminal domain C1I88_05240 PF03330 Lytic transglycolase C1I88_05240 PF05036 Sporulation related domain C1I88_05245 PF01513 ATP-NAD kinase C1I88_05250 PF00467 KOW motif C1I88_05250 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1I88_05255 PF00281 Ribosomal protein L5 C1I88_05255 PF00673 ribosomal L5P family C-terminus C1I88_05260 PF00410 Ribosomal protein S8 C1I88_05265 PF00347 Ribosomal protein L6 C1I88_05270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1I88_05275 PF03719 Ribosomal protein S5, C-terminal domain C1I88_05275 PF00333 Ribosomal protein S5, N-terminal domain C1I88_05280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1I88_05285 PF00344 SecY translocase C1I88_05290 PF05191 Adenylate kinase, active site lid C1I88_05295 PF00557 Metallopeptidase family M24 C1I88_05310 PF13089 Polyphosphate kinase N-terminal domain C1I88_05310 PF02503 Polyphosphate kinase middle domain C1I88_05310 PF17941 Polyphosphate kinase C-terminal domain 1 C1I88_05310 PF13090 Polyphosphate kinase C-terminal domain 2 C1I88_05315 PF01501 Glycosyl transferase family 8 C1I88_05325 PF00535 Glycosyl transferase family 2 C1I88_05330 PF01531 Glycosyl transferase family 11 C1I88_05335 PF00535 Glycosyl transferase family 2 C1I88_05350 PF00535 Glycosyl transferase family 2 C1I88_05355 PF01965 DJ-1/PfpI family C1I88_05360 PF00364 Biotin-requiring enzyme C1I88_05360 PF02817 e3 binding domain C1I88_05360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1I88_05365 PF01979 Amidohydrolase family C1I88_05370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1I88_05380 PF02554 Carbon starvation protein CstA C1I88_05395 PF00884 Sulfatase C1I88_05400 PF02033 Ribosome-binding factor A C1I88_05405 PF04760 Translation initiation factor IF-2, N-terminal region C1I88_05405 PF11987 Translation-initiation factor 2 C1I88_05405 PF00009 Elongation factor Tu GTP binding domain C1I88_05410 PF13184 NusA-like KH domain C1I88_05410 PF08529 NusA N-terminal domain C1I88_05410 PF00575 S1 RNA binding domain C1I88_05415 PF03372 Endonuclease/Exonuclease/phosphatase family C1I88_05420 PF01725 Ham1 family C1I88_05425 PF06962 Putative rRNA methylase C1I88_05430 PF04015 Domain of unknown function (DUF362) C1I88_05440 PF01061 ABC-2 type transporter C1I88_05440 PF00498 FHA domain C1I88_05440 PF00005 ABC transporter C1I88_05460 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C1I88_05465 PF02397 Bacterial sugar transferase C1I88_05470 PF00288 GHMP kinases N terminal domain C1I88_05470 PF08544 GHMP kinases C terminal C1I88_05470 PF10509 Galactokinase galactose-binding signature C1I88_05475 PF00474 Sodium:solute symporter family C1I88_05480 PF13361 UvrD-like helicase C-terminal domain C1I88_05480 PF00580 UvrD/REP helicase N-terminal domain C1I88_05485 PF02911 Formyl transferase, C-terminal domain C1I88_05485 PF00551 Formyl transferase C1I88_05490 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C1I88_05490 PF04101 Glycosyltransferase family 28 C-terminal domain C1I88_05495 PF03309 Type III pantothenate kinase C1I88_05500 PF00550 Phosphopantetheine attachment site C1I88_05515 PF02580 D-Tyr-tRNA(Tyr) deacylase C1I88_05545 PF13085 2Fe-2S iron-sulfur cluster binding domain C1I88_05550 PF00890 FAD binding domain C1I88_05550 PF02910 Fumarate reductase flavoprotein C-term C1I88_05610 PF12848 ABC transporter C1I88_05610 PF16326 ABC transporter C-terminal domain C1I88_05610 PF00005 ABC transporter C1I88_05620 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C1I88_05620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1I88_05630 PF01595 Cyclin M transmembrane N-terminal domain C1I88_05630 PF03471 Transporter associated domain C1I88_05630 PF00571 CBS domain C1I88_05645 PF12146 Serine aminopeptidase, S33 C1I88_05655 PF01055 Glycosyl hydrolases family 31 C1I88_05655 PF13802 Galactose mutarotase-like C1I88_05655 PF16338 Domain of unknown function (DUF4968) C1I88_05655 PF17137 Domain of unknown function (DUF5110) C1I88_05665 PF00072 Response regulator receiver domain C1I88_05665 PF04397 LytTr DNA-binding domain C1I88_05710 PF01914 MarC family integral membrane protein C1I88_05770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1I88_05775 PF00005 ABC transporter C1I88_05775 PF16326 ABC transporter C-terminal domain C1I88_05775 PF12848 ABC transporter C1I88_05785 PF00892 EamA-like transporter family C1I88_05795 PF01406 tRNA synthetases class I (C) catalytic domain C1I88_05795 PF09190 DALR domain C1I88_05800 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_05800 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_05805 PF00884 Sulfatase C1I88_05805 PF16347 Domain of unknown function (DUF4976) C1I88_05815 PF00679 Elongation factor G C-terminus C1I88_05815 PF06421 GTP-binding protein LepA C-terminus C1I88_05815 PF03144 Elongation factor Tu domain 2 C1I88_05815 PF00009 Elongation factor Tu GTP binding domain C1I88_05830 PF04983 RNA polymerase Rpb1, domain 3 C1I88_05830 PF05000 RNA polymerase Rpb1, domain 4 C1I88_05830 PF04998 RNA polymerase Rpb1, domain 5 C1I88_05830 PF00623 RNA polymerase Rpb1, domain 2 C1I88_05830 PF04997 RNA polymerase Rpb1, domain 1 C1I88_05835 PF04560 RNA polymerase Rpb2, domain 7 C1I88_05835 PF00562 RNA polymerase Rpb2, domain 6 C1I88_05835 PF10385 RNA polymerase beta subunit external 1 domain C1I88_05835 PF04561 RNA polymerase Rpb2, domain 2 C1I88_05835 PF04565 RNA polymerase Rpb2, domain 3 C1I88_05835 PF04563 RNA polymerase beta subunit C1I88_05840 PF16320 Ribosomal protein L7/L12 dimerisation domain C1I88_05840 PF00542 Ribosomal protein L7/L12 C-terminal domain C1I88_05845 PF00466 Ribosomal protein L10 C1I88_05850 PF00687 Ribosomal protein L1p/L10e family C1I88_05855 PF00298 Ribosomal protein L11, RNA binding domain C1I88_05855 PF03946 Ribosomal protein L11, N-terminal domain C1I88_05860 PF02357 Transcription termination factor nusG C1I88_05860 PF00467 KOW motif C1I88_05875 PF00009 Elongation factor Tu GTP binding domain C1I88_05875 PF03144 Elongation factor Tu domain 2 C1I88_05875 PF03143 Elongation factor Tu C-terminal domain C1I88_05885 PF00814 Glycoprotease family C1I88_05890 PF07724 AAA domain (Cdc48 subfamily) C1I88_05890 PF10431 C-terminal, D2-small domain, of ClpB protein C1I88_05890 PF06689 ClpX C4-type zinc finger C1I88_05895 PF00574 Clp protease C1I88_05900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1I88_05900 PF05697 Bacterial trigger factor protein (TF) C1I88_05900 PF05698 Bacterial trigger factor protein (TF) C-terminus C1I88_05905 PF07244 Surface antigen variable number repeat C1I88_05905 PF01103 Surface antigen C1I88_05915 PF02219 Methylenetetrahydrofolate reductase C1I88_05935 PF00873 AcrB/AcrD/AcrF family C1I88_05980 PF13649 Methyltransferase domain C1I88_05985 PF02772 S-adenosylmethionine synthetase, central domain C1I88_05985 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1I88_05985 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1I88_05990 PF05221 S-adenosyl-L-homocysteine hydrolase C1I88_05990 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1I88_06005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1I88_06015 PF16347 Domain of unknown function (DUF4976) C1I88_06015 PF00884 Sulfatase C1I88_06020 PF00270 DEAD/DEAH box helicase C1I88_06020 PF00271 Helicase conserved C-terminal domain C1I88_06020 PF00570 HRDC domain C1I88_06020 PF16124 RecQ zinc-binding C1I88_06020 PF09382 RQC domain C1I88_06030 PF00534 Glycosyl transferases group 1 C1I88_06035 PF02910 Fumarate reductase flavoprotein C-term C1I88_06035 PF00890 FAD binding domain C1I88_06040 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1I88_06040 PF00588 SpoU rRNA Methylase family C1I88_06090 PF07664 Ferrous iron transport protein B C terminus C1I88_06090 PF17910 FeoB cytosolic helical domain C1I88_06090 PF02421 Ferrous iron transport protein B C1I88_06090 PF07670 Nucleoside recognition C1I88_06105 PF00034 Cytochrome c C1I88_06105 PF14376 Haem-binding domain C1I88_06105 PF03150 Di-haem cytochrome c peroxidase C1I88_06110 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1I88_06110 PF04055 Radical SAM superfamily C1I88_06115 PF14437 MafB19-like deaminase C1I88_06120 PF00480 ROK family C1I88_06125 PF00403 Heavy-metal-associated domain C1I88_06130 PF07498 Rho termination factor, N-terminal domain C1I88_06130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1I88_06130 PF07497 Rho termination factor, RNA-binding domain C1I88_06135 PF01121 Dephospho-CoA kinase C1I88_06140 PF00263 Bacterial type II and III secretion system protein C1I88_06140 PF03958 Bacterial type II/III secretion system short domain C1I88_06165 PF05343 M42 glutamyl aminopeptidase C1I88_06170 PF01790 Prolipoprotein diacylglyceryl transferase C1I88_06185 PF05195 Aminopeptidase P, N-terminal domain C1I88_06185 PF00557 Metallopeptidase family M24 C1I88_06190 PF08029 HisG, C-terminal domain C1I88_06190 PF01634 ATP phosphoribosyltransferase C1I88_06205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_06205 PF11808 Phosphate regulon sensor protein PhoR C1I88_06205 PF00512 His Kinase A (phospho-acceptor) domain C1I88_06205 PF00989 PAS fold C1I88_06210 PF00486 Transcriptional regulatory protein, C terminal C1I88_06210 PF00072 Response regulator receiver domain C1I88_06215 PF00920 Dehydratase family C1I88_06240 PF00884 Sulfatase C1I88_06275 PF01370 NAD dependent epimerase/dehydratase family C1I88_06280 PF00398 Ribosomal RNA adenine dimethylase C1I88_06300 PF01554 MatE C1I88_06305 PF02386 Cation transport protein C1I88_06320 PF13539 D-alanyl-D-alanine carboxypeptidase C1I88_06365 PF14220 Domain of unknown function (DUF4329) C1I88_06365 PF03527 RHS protein C1I88_06365 PF05593 RHS Repeat C1I88_06375 PF05593 RHS Repeat C1I88_06375 PF03527 RHS protein C1I88_06375 PF14220 Domain of unknown function (DUF4329) C1I88_06415 PF03527 RHS protein C1I88_06415 PF14220 Domain of unknown function (DUF4329) C1I88_06415 PF05593 RHS Repeat C1I88_06470 PF03527 RHS protein C1I88_06470 PF14220 Domain of unknown function (DUF4329) C1I88_06470 PF05593 RHS Repeat C1I88_06520 PF03814 Potassium-transporting ATPase A subunit C1I88_06530 PF02669 K+-transporting ATPase, c chain C1I88_06535 PF02702 Osmosensitive K+ channel His kinase sensor domain C1I88_06535 PF13492 GAF domain C1I88_06535 PF13493 Domain of unknown function (DUF4118) C1I88_06535 PF00512 His Kinase A (phospho-acceptor) domain C1I88_06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_06545 PF12867 DinB superfamily C1I88_06545 PF03781 Sulfatase-modifying factor enzyme 1 C1I88_06555 PF16123 Hydroxyacylglutathione hydrolase C-terminus C1I88_06555 PF00753 Metallo-beta-lactamase superfamily C1I88_06565 PF00069 Protein kinase domain C1I88_06565 PF03793 PASTA domain C1I88_06570 PF00248 Aldo/keto reductase family C1I88_06575 PF13411 MerR HTH family regulatory protein C1I88_06585 PF01212 Beta-eliminating lyase C1I88_06615 PF00005 ABC transporter C1I88_06625 PF17863 AAA lid domain C1I88_06625 PF07726 ATPase family associated with various cellular activities (AAA) C1I88_06630 PF04235 Protein of unknown function (DUF418) C1I88_06655 PF01370 NAD dependent epimerase/dehydratase family C1I88_06655 PF08338 Domain of unknown function (DUF1731) C1I88_06670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1I88_06670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1I88_06675 PF00005 ABC transporter C1I88_06680 PF00392 Bacterial regulatory proteins, gntR family C1I88_06680 PF07729 FCD domain C1I88_06695 PF00884 Sulfatase C1I88_06705 PF00113 Enolase, C-terminal TIM barrel domain C1I88_06705 PF03952 Enolase, N-terminal domain C1I88_06720 PF02424 ApbE family C1I88_06735 PF00830 Ribosomal L28 family C1I88_06750 PF03652 Holliday junction resolvase C1I88_06755 PF00483 Nucleotidyl transferase C1I88_06755 PF01050 Mannose-6-phosphate isomerase C1I88_06760 PF01255 Putative undecaprenyl diphosphate synthase C1I88_06765 PF00204 DNA gyrase B C1I88_06765 PF00986 DNA gyrase B subunit, carboxyl terminus C1I88_06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_06765 PF01751 Toprim domain C1I88_06770 PF08544 GHMP kinases C terminal C1I88_06770 PF00288 GHMP kinases N terminal domain C1I88_06780 PF06733 DEAD_2 C1I88_06780 PF13307 Helicase C-terminal domain C1I88_06785 PF00005 ABC transporter C1I88_06810 PF00696 Amino acid kinase family C1I88_06815 PF01544 CorA-like Mg2+ transporter protein C1I88_06820 PF01281 Ribosomal protein L9, N-terminal domain C1I88_06820 PF03948 Ribosomal protein L9, C-terminal domain C1I88_06825 PF01808 AICARFT/IMPCHase bienzyme C1I88_06825 PF02142 MGS-like domain C1I88_06830 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C1I88_06835 PF01648 4'-phosphopantetheinyl transferase superfamily C1I88_06845 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C1I88_06845 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C1I88_06850 PF01471 Putative peptidoglycan binding domain C1I88_06850 PF01476 LysM domain C1I88_06850 PF01510 N-acetylmuramoyl-L-alanine amidase C1I88_06855 PF00270 DEAD/DEAH box helicase C1I88_06855 PF17191 RecG wedge domain C1I88_06855 PF00271 Helicase conserved C-terminal domain C1I88_06865 PF00037 4Fe-4S binding domain C1I88_06865 PF13247 4Fe-4S dicluster domain C1I88_06875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1I88_06885 PF01761 3-dehydroquinate synthase C1I88_06935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1I88_06945 PF00571 CBS domain C1I88_06945 PF01368 DHH family C1I88_06945 PF02833 DHHA2 domain C1I88_06945 PF07085 DRTGG domain C1I88_06955 PF02575 YbaB/EbfC DNA-binding family C1I88_06960 PF12169 DNA polymerase III subunits gamma and tau domain III C1I88_06980 PF04002 RadC-like JAB domain C1I88_06985 PF04002 RadC-like JAB domain C1I88_06990 PF03853 YjeF-related protein N-terminus C1I88_06990 PF01256 Carbohydrate kinase C1I88_06995 PF01176 Translation initiation factor 1A / IF-1 C1I88_07000 PF00572 Ribosomal protein L13 C1I88_07005 PF00380 Ribosomal protein S9/S16 C1I88_07010 PF02590 Predicted SPOUT methyltransferase C1I88_07015 PF08459 UvrC Helix-hairpin-helix N-terminal C1I88_07015 PF02151 UvrB/uvrC motif C1I88_07015 PF01541 GIY-YIG catalytic domain C1I88_07020 PF01618 MotA/TolQ/ExbB proton channel family C1I88_07025 PF02472 Biopolymer transport protein ExbD/TolR C1I88_07035 PF17092 Penicillin-binding protein OB-like domain C1I88_07035 PF00912 Transglycosylase C1I88_07035 PF00905 Penicillin binding protein transpeptidase domain C1I88_07040 PF00459 Inositol monophosphatase family C1I88_07045 PF02542 YgbB family C1I88_07055 PF01238 Phosphomannose isomerase type I C1I88_07065 PF03553 Na+/H+ antiporter family C1I88_07070 PF01370 NAD dependent epimerase/dehydratase family C1I88_07075 PF16363 GDP-mannose 4,6 dehydratase C1I88_07080 PF00117 Glutamine amidotransferase class-I C1I88_07080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1I88_07085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1I88_07085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1I88_07085 PF02142 MGS-like domain C1I88_07090 PF18318 Glutamine synthetase C-terminal domain C1I88_07090 PF12437 Glutamine synthetase type III N terminal C1I88_07090 PF00120 Glutamine synthetase, catalytic domain C1I88_07095 PF01645 Conserved region in glutamate synthase C1I88_07095 PF04898 Glutamate synthase central domain C1I88_07095 PF00310 Glutamine amidotransferases class-II C1I88_07095 PF01493 GXGXG motif C1I88_07105 PF14849 YidC periplasmic domain C1I88_07105 PF02096 60Kd inner membrane protein C1I88_07110 PF01809 Putative membrane protein insertion efficiency factor C1I88_07115 PF00825 Ribonuclease P C1I88_07120 PF00468 Ribosomal protein L34 C1I88_07125 PF00120 Glutamine synthetase, catalytic domain C1I88_07125 PF18318 Glutamine synthetase C-terminal domain C1I88_07125 PF12437 Glutamine synthetase type III N terminal C1I88_07135 PF07859 alpha/beta hydrolase fold C1I88_07135 PF13472 GDSL-like Lipase/Acylhydrolase family C1I88_07145 PF01263 Aldose 1-epimerase C1I88_07155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1I88_07155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1I88_07160 PF00348 Polyprenyl synthetase C1I88_07165 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1I88_07165 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1I88_07185 PF03313 Serine dehydratase alpha chain C1I88_07185 PF03315 Serine dehydratase beta chain C1I88_07190 PF00085 Thioredoxin C1I88_07190 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1I88_07235 PF00999 Sodium/hydrogen exchanger family C1I88_07235 PF02254 TrkA-N domain C1I88_07240 PF00149 Calcineurin-like phosphoesterase C1I88_07245 PF02073 Thermophilic metalloprotease (M29) C1I88_07250 PF00551 Formyl transferase C1I88_07255 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C1I88_07255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1I88_07270 PF00986 DNA gyrase B subunit, carboxyl terminus C1I88_07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_07270 PF01751 Toprim domain C1I88_07270 PF00204 DNA gyrase B C1I88_07275 PF00521 DNA gyrase/topoisomerase IV, subunit A C1I88_07275 PF03989 DNA gyrase C-terminal domain, beta-propeller C1I88_07285 PF01136 Peptidase family U32 C1I88_07295 PF03781 Sulfatase-modifying factor enzyme 1 C1I88_07315 PF01895 PhoU domain C1I88_07320 PF00005 ABC transporter C1I88_07325 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_07330 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_07335 PF12849 PBP superfamily domain C1I88_07340 PF00005 ABC transporter C1I88_07350 PF01263 Aldose 1-epimerase C1I88_07365 PF05193 Peptidase M16 inactive domain C1I88_07365 PF00675 Insulinase (Peptidase family M16) C1I88_07405 PF01765 Ribosome recycling factor C1I88_07410 PF00696 Amino acid kinase family C1I88_07415 PF00924 Mechanosensitive ion channel C1I88_07415 PF05552 Conserved TM helix C1I88_07425 PF00578 AhpC/TSA family C1I88_07425 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1I88_07430 PF00209 Sodium:neurotransmitter symporter family C1I88_07455 PF00109 Beta-ketoacyl synthase, N-terminal domain C1I88_07455 PF02801 Beta-ketoacyl synthase, C-terminal domain C1I88_07460 PF01641 SelR domain C1I88_07465 PF00817 impB/mucB/samB family C1I88_07465 PF11799 impB/mucB/samB family C-terminal domain C1I88_07500 PF00005 ABC transporter C1I88_07505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I88_07510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1I88_07510 PF02272 DHHA1 domain C1I88_07510 PF01411 tRNA synthetases class II (A) C1I88_07515 PF01066 CDP-alcohol phosphatidyltransferase C1I88_07525 PF00809 Pterin binding enzyme C1I88_07535 PF04551 GcpE protein C1I88_07560 PF00109 Beta-ketoacyl synthase, N-terminal domain C1I88_07560 PF02801 Beta-ketoacyl synthase, C-terminal domain C1I88_07565 PF00155 Aminotransferase class I and II C1I88_07590 PF00152 tRNA synthetases class II (D, K and N) C1I88_07590 PF02938 GAD domain C1I88_07590 PF01336 OB-fold nucleic acid binding domain C1I88_07595 PF03129 Anticodon binding domain C1I88_07595 PF13393 Histidyl-tRNA synthetase C1I88_07600 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1I88_07605 PF17788 HypF Kae1-like domain C1I88_07605 PF01300 Telomere recombination C1I88_07605 PF07503 HypF finger C1I88_07605 PF00708 Acylphosphatase C1I88_07610 PF01455 HupF/HypC family C1I88_07615 PF01924 Hydrogenase formation hypA family C1I88_07620 PF00586 AIR synthase related protein, N-terminal domain C1I88_07620 PF02769 AIR synthase related protein, C-terminal domain C1I88_07640 PF00012 Hsp70 protein C1I88_07645 PF00166 Chaperonin 10 Kd subunit C1I88_07650 PF00118 TCP-1/cpn60 chaperonin family C1I88_07685 PF02706 Chain length determinant protein C1I88_07685 PF13614 AAA domain C1I88_07685 PF13807 G-rich domain on putative tyrosine kinase C1I88_07700 PF07499 RuvA, C-terminal domain C1I88_07700 PF01330 RuvA N terminal domain C1I88_07705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1I88_07705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1I88_07710 PF00162 Phosphoglycerate kinase C1I88_07720 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation C1I88_07720 PF10566 Glycoside hydrolase 97 C1I88_07720 PF14508 Glycosyl-hydrolase 97 N-terminal C1I88_07725 PF08239 Bacterial SH3 domain C1I88_07725 PF00069 Protein kinase domain C1I88_07730 PF02559 CarD-like/TRCF domain C1I88_07730 PF03461 TRCF domain C1I88_07730 PF00271 Helicase conserved C-terminal domain C1I88_07730 PF00270 DEAD/DEAH box helicase C1I88_07730 PF17757 UvrB interaction domain C1I88_07740 PF07690 Major Facilitator Superfamily C1I88_07745 PF01344 Kelch motif C1I88_07755 PF02811 PHP domain C1I88_07760 PF01515 Phosphate acetyl/butaryl transferase C1I88_07760 PF07085 DRTGG domain C1I88_07765 PF11734 TilS substrate C-terminal domain C1I88_07765 PF01171 PP-loop family C1I88_07770 PF01197 Ribosomal protein L31 C1I88_07805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1I88_07805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1I88_07805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1I88_07810 PF00056 lactate/malate dehydrogenase, NAD binding domain C1I88_07810 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1I88_07835 PF00881 Nitroreductase family C1I88_07840 PF00849 RNA pseudouridylate synthase C1I88_07845 PF01479 S4 domain C1I88_07845 PF00849 RNA pseudouridylate synthase C1I88_07870 PF00005 ABC transporter C1I88_07875 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_07885 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1I88_07885 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1I88_07890 PF01960 ArgJ family C1I88_07920 PF17760 UvrA interaction domain C1I88_07920 PF00005 ABC transporter C1I88_07920 PF17755 UvrA DNA-binding domain C1I88_07945 PF00977 Histidine biosynthesis protein C1I88_07950 PF02594 Uncharacterised ACR, YggU family COG1872 C1I88_07955 PF01025 GrpE C1I88_07960 PF00226 DnaJ domain C1I88_07960 PF01556 DnaJ C terminal domain C1I88_07960 PF00684 DnaJ central domain C1I88_07965 PF04452 RNA methyltransferase C1I88_07975 PF13229 Right handed beta helix region C1I88_08005 PF13229 Right handed beta helix region C1I88_08020 PF10502 Signal peptidase, peptidase S26 C1I88_08025 PF02913 FAD linked oxidases, C-terminal domain C1I88_08025 PF01565 FAD binding domain C1I88_08050 PF14572 Phosphoribosyl synthetase-associated domain C1I88_08050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1I88_08055 PF01386 Ribosomal L25p family C1I88_08055 PF14693 Ribosomal protein TL5, C-terminal domain C1I88_08070 PF00475 Imidazoleglycerol-phosphate dehydratase C1I88_08075 PF00117 Glutamine amidotransferase class-I C1I88_08080 PF01250 Ribosomal protein S6 C1I88_08085 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C1I88_08100 PF00768 D-alanyl-D-alanine carboxypeptidase C1I88_08100 PF07943 Penicillin-binding protein 5, C-terminal domain C1I88_08105 PF00365 Phosphofructokinase C1I88_08115 PF02535 ZIP Zinc transporter C1I88_08130 PF00155 Aminotransferase class I and II C1I88_08135 PF08340 Domain of unknown function (DUF1732) C1I88_08135 PF03755 YicC-like family, N-terminal region C1I88_08140 PF00625 Guanylate kinase C1I88_08145 PF03600 Citrate transporter C1I88_08145 PF02080 TrkA-C domain C1I88_08150 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1I88_08165 PF01040 UbiA prenyltransferase family C1I88_08170 PF01487 Type I 3-dehydroquinase C1I88_08200 PF01522 Polysaccharide deacetylase C1I88_08200 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain C1I88_08205 PF07549 SecD/SecF GG Motif C1I88_08205 PF02355 Protein export membrane protein C1I88_08215 PF06750 Bacterial Peptidase A24 N-terminal domain C1I88_08215 PF01478 Type IV leader peptidase family C1I88_08225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1I88_08225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1I88_08225 PF01000 RNA polymerase Rpb3/RpoA insert domain C1I88_08230 PF01196 Ribosomal protein L17 C1I88_08235 PF00698 Acyl transferase domain C1I88_08245 PF13419 Haloacid dehalogenase-like hydrolase C1I88_08265 PF00691 OmpA family C1I88_08330 PF00248 Aldo/keto reductase family C1I88_08335 PF03030 Inorganic H+ pyrophosphatase C1I88_08355 PF00425 chorismate binding enzyme C1I88_08355 PF04715 Anthranilate synthase component I, N terminal region C1I88_08360 PF02885 Glycosyl transferase family, helical bundle domain C1I88_08360 PF00591 Glycosyl transferase family, a/b domain C1I88_08365 PF00218 Indole-3-glycerol phosphate synthase C1I88_08370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1I88_08375 PF00291 Pyridoxal-phosphate dependent enzyme C1I88_08380 PF00290 Tryptophan synthase alpha chain C1I88_08400 PF00561 alpha/beta hydrolase fold C1I88_08405 PF00444 Ribosomal protein L36 C1I88_08415 PF04055 Radical SAM superfamily C1I88_08420 PF02901 Pyruvate formate lyase-like C1I88_08420 PF01228 Glycine radical C1I88_08465 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C1I88_08470 PF07690 Major Facilitator Superfamily C1I88_08540 PF00012 Hsp70 protein C1I88_08545 PF00012 Hsp70 protein C1I88_08550 PF00012 Hsp70 protein C1I88_08565 PF02534 Type IV secretory system Conjugative DNA transfer C1I88_08590 PF17757 UvrB interaction domain C1I88_08590 PF00271 Helicase conserved C-terminal domain C1I88_08590 PF04851 Type III restriction enzyme, res subunit C1I88_08590 PF02151 UvrB/uvrC motif C1I88_08590 PF12344 Ultra-violet resistance protein B C1I88_08600 PF01632 Ribosomal protein L35 C1I88_08605 PF00453 Ribosomal protein L20 C1I88_08610 PF17820 PDZ domain C1I88_08610 PF02163 Peptidase family M50 C1I88_08625 PF00580 UvrD/REP helicase N-terminal domain C1I88_08625 PF13361 UvrD-like helicase C-terminal domain C1I88_08625 PF12705 PD-(D/E)XK nuclease superfamily C1I88_08635 PF00892 EamA-like transporter family C1I88_08640 PF01835 MG2 domain C1I88_08640 PF00207 Alpha-2-macroglobulin family C1I88_08640 PF07703 Alpha-2-macroglobulin bait region domain C1I88_08640 PF07678 A-macroglobulin TED domain C1I88_08640 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C1I88_08645 PF00465 Iron-containing alcohol dehydrogenase C1I88_08660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1I88_08660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1I88_08700 PF00285 Citrate synthase, C-terminal domain C1I88_08705 PF00588 SpoU rRNA Methylase family C1I88_08715 PF01668 SmpB protein C1I88_08725 PF00849 RNA pseudouridylate synthase C1I88_08735 PF00334 Nucleoside diphosphate kinase C1I88_08740 PF00535 Glycosyl transferase family 2 C1I88_08745 PF00535 Glycosyl transferase family 2 C1I88_08755 PF00482 Type II secretion system (T2SS), protein F C1I88_08760 PF00437 Type II/IV secretion system protein C1I88_08765 PF00437 Type II/IV secretion system protein C1I88_08770 PF01207 Dihydrouridine synthase (Dus) C1I88_08780 PF00155 Aminotransferase class I and II C1I88_08785 PF03023 Lipid II flippase MurJ C1I88_08790 PF00294 pfkB family carbohydrate kinase C1I88_08790 PF01467 Cytidylyltransferase-like C1I88_08795 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1I88_08795 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1I88_08805 PF02638 Glycosyl hydrolase-like 10 C1I88_08810 PF00731 AIR carboxylase C1I88_08820 PF01969 Protein of unknown function DUF111 C1I88_08825 PF00348 Polyprenyl synthetase C1I88_08830 PF00854 POT family C1I88_08855 PF00361 Proton-conducting membrane transporter C1I88_08860 PF00361 Proton-conducting membrane transporter C1I88_08865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1I88_08865 PF00361 Proton-conducting membrane transporter C1I88_08870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1I88_08875 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C1I88_08890 PF01568 Molydopterin dinucleotide binding domain C1I88_08890 PF00384 Molybdopterin oxidoreductase C1I88_08890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C1I88_08890 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C1I88_08895 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C1I88_08895 PF10531 SLBB domain C1I88_08895 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C1I88_08905 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C1I88_08915 PF01522 Polysaccharide deacetylase C1I88_08925 PF00677 Lumazine binding domain C1I88_08945 PF07548 Chlamydia polymorphic membrane protein middle domain C1I88_08945 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat C1I88_08945 PF03797 Autotransporter beta-domain C1I88_08950 PF02446 4-alpha-glucanotransferase C1I88_08965 PF00919 Uncharacterized protein family UPF0004 C1I88_08965 PF18693 TRAM domain C1I88_08965 PF04055 Radical SAM superfamily C1I88_08970 PF01957 NfeD-like C-terminal, partner-binding C1I88_08970 PF01972 Serine dehydrogenase proteinase C1I88_08975 PF01807 CHC2 zinc finger C1I88_08975 PF08275 DNA primase catalytic core, N-terminal domain C1I88_08975 PF10410 DnaB-helicase binding domain of primase C1I88_08980 PF04539 Sigma-70 region 3 C1I88_08980 PF04542 Sigma-70 region 2 C1I88_08980 PF00140 Sigma-70 factor, region 1.2 C1I88_08980 PF03979 Sigma-70 factor, region 1.1 C1I88_08980 PF04545 Sigma-70, region 4 C1I88_08985 PF01427 D-ala-D-ala dipeptidase C1I88_09000 PF00464 Serine hydroxymethyltransferase C1I88_09005 PF03572 Peptidase family S41 C1I88_09005 PF11818 C-terminal domain of tail specific protease (DUF3340) C1I88_09005 PF17804 Tail specific protease N-terminal domain C1I88_09005 PF00595 PDZ domain C1I88_09020 PF04408 Helicase associated domain (HA2) C1I88_09020 PF08482 ATP-dependent helicase C-terminal C1I88_09020 PF00271 Helicase conserved C-terminal domain C1I88_09020 PF00270 DEAD/DEAH box helicase C1I88_09035 PF01743 Poly A polymerase head domain C1I88_09035 PF12627 Probable RNA and SrmB- binding site of polymerase A C1I88_09035 PF13735 tRNA nucleotidyltransferase domain 2 putative C1I88_09045 PF03958 Bacterial type II/III secretion system short domain C1I88_09045 PF00263 Bacterial type II and III secretion system protein C1I88_09060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1I88_09060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1I88_09080 PF01207 Dihydrouridine synthase (Dus) C1I88_09085 PF02401 LytB protein C1I88_09095 PF01649 Ribosomal protein S20 C1I88_09100 PF13419 Haloacid dehalogenase-like hydrolase C1I88_09105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1I88_09105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1I88_09105 PF00205 Thiamine pyrophosphate enzyme, central domain C1I88_09115 PF02666 Phosphatidylserine decarboxylase C1I88_09120 PF00834 Ribulose-phosphate 3 epimerase family C1I88_09125 PF13603 Leucyl-tRNA synthetase, Domain 2 C1I88_09125 PF08264 Anticodon-binding domain of tRNA C1I88_09125 PF00133 tRNA synthetases class I (I, L, M and V) C1I88_09125 PF09334 tRNA synthetases class I (M) C1I88_09130 PF00884 Sulfatase C1I88_09140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1I88_09145 PF17944 Arginine decarboxylase C-terminal helical extension C1I88_09145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1I88_09145 PF17810 Arginine decarboxylase helical bundle domain C1I88_09160 PF16353 Domain of unknown function(DUF4981) C1I88_09160 PF00703 Glycosyl hydrolases family 2 C1I88_09160 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I88_09160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I88_09160 PF02929 Beta galactosidase small chain C1I88_09165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C1I88_09165 PF02837 Glycosyl hydrolases family 2, sugar binding domain C1I88_09165 PF00703 Glycosyl hydrolases family 2 C1I88_09170 PF16193 AAA C-terminal domain C1I88_09170 PF00004 ATPase family associated with various cellular activities (AAA) C1I88_09170 PF12002 MgsA AAA+ ATPase C terminal C1I88_09175 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_09175 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_09175 PF07691 PA14 domain C1I88_09185 PF00365 Phosphofructokinase C1I88_09210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C1I88_09225 PF02277 Phosphoribosyltransferase C1I88_09230 PF03186 CobD/Cbib protein C1I88_09235 PF07685 CobB/CobQ-like glutamine amidotransferase domain C1I88_09235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1I88_09235 PF00155 Aminotransferase class I and II C1I88_09245 PF00593 TonB dependent receptor C1I88_09245 PF07715 TonB-dependent Receptor Plug Domain C1I88_09255 PF01301 Glycosyl hydrolases family 35 C1I88_09265 PF01979 Amidohydrolase family C1I88_09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1I88_09270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1I88_09285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1I88_09285 PF02817 e3 binding domain C1I88_09285 PF00364 Biotin-requiring enzyme C1I88_09290 PF16078 2-oxoglutarate dehydrogenase N-terminus C1I88_09290 PF00676 Dehydrogenase E1 component C1I88_09290 PF16870 2-oxoglutarate dehydrogenase C-terminal C1I88_09290 PF02779 Transketolase, pyrimidine binding domain C1I88_09295 PF02322 Cytochrome bd terminal oxidase subunit II C1I88_09300 PF01654 Cytochrome bd terminal oxidase subunit I C1I88_09310 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1I88_09325 PF00291 Pyridoxal-phosphate dependent enzyme C1I88_09330 PF01047 MarR family C1I88_09340 PF00210 Ferritin-like domain C1I88_09360 PF02698 DUF218 domain C1I88_09390 PF00270 DEAD/DEAH box helicase C1I88_09390 PF09382 RQC domain C1I88_09390 PF00570 HRDC domain C1I88_09390 PF00271 Helicase conserved C-terminal domain C1I88_09390 PF16124 RecQ zinc-binding C1I88_09575 PF00549 CoA-ligase C1I88_09575 PF02629 CoA binding domain C1I88_09580 PF08442 ATP-grasp domain C1I88_09580 PF00549 CoA-ligase C1I88_09620 PF02601 Exonuclease VII, large subunit C1I88_09620 PF13742 OB-fold nucleic acid binding domain C1I88_09625 PF00501 AMP-binding enzyme C1I88_09625 PF01553 Acyltransferase C1I88_09655 PF01370 NAD dependent epimerase/dehydratase family C1I88_09660 PF00512 His Kinase A (phospho-acceptor) domain C1I88_09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_09660 PF00672 HAMP domain C1I88_09665 PF00072 Response regulator receiver domain C1I88_09665 PF00486 Transcriptional regulatory protein, C terminal C1I88_09675 PF00490 Delta-aminolevulinic acid dehydratase C1I88_09690 PF03129 Anticodon binding domain C1I88_09690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I88_09690 PF02824 TGS domain C1I88_09690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1I88_09695 PF05198 Translation initiation factor IF-3, N-terminal domain C1I88_09695 PF00707 Translation initiation factor IF-3, C-terminal domain C1I88_09700 PF02796 Helix-turn-helix domain of resolvase C1I88_09700 PF00239 Resolvase, N terminal domain C1I88_09720 PF04235 Protein of unknown function (DUF418) C1I88_09720 PF07786 Protein of unknown function (DUF1624) C1I88_09725 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1I88_09725 PF13288 DXP reductoisomerase C-terminal domain C1I88_09725 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1I88_09730 PF01467 Cytidylyltransferase-like C1I88_09765 PF04991 LicD family C1I88_09770 PF01467 Cytidylyltransferase-like C1I88_09780 PF00155 Aminotransferase class I and II C1I88_09785 PF04991 LicD family C1I88_09790 PF02806 Alpha amylase, C-terminal all-beta domain C1I88_09790 PF00128 Alpha amylase, catalytic domain C1I88_09790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C1I88_09800 PF02657 Fe-S metabolism associated domain C1I88_09805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1I88_09805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1I88_09810 PF00884 Sulfatase C1I88_09815 PF05524 PEP-utilising enzyme, N-terminal C1I88_09815 PF02896 PEP-utilising enzyme, TIM barrel domain C1I88_09815 PF00391 PEP-utilising enzyme, mobile domain C1I88_09820 PF00381 PTS HPr component phosphorylation site C1I88_09825 PF07475 HPr Serine kinase C-terminal domain C1I88_09825 PF02603 HPr Serine kinase N terminus C1I88_09830 PF01546 Peptidase family M20/M25/M40 C1I88_09830 PF07687 Peptidase dimerisation domain C1I88_09835 PF00005 ABC transporter C1I88_09850 PF01168 Alanine racemase, N-terminal domain C1I88_09865 PF00535 Glycosyl transferase family 2 C1I88_09875 PF04379 ApaG domain C1I88_09880 PF00271 Helicase conserved C-terminal domain C1I88_09880 PF04434 SWIM zinc finger C1I88_09880 PF00176 SNF2 family N-terminal domain C1I88_09885 PF01037 Lrp/AsnC ligand binding domain C1I88_09890 PF00155 Aminotransferase class I and II C1I88_09905 PF03129 Anticodon binding domain C1I88_09905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I88_09910 PF00248 Aldo/keto reductase family C1I88_09925 PF13519 von Willebrand factor type A domain C1I88_09940 PF17863 AAA lid domain C1I88_09940 PF07726 ATPase family associated with various cellular activities (AAA) C1I88_09945 PF01425 Amidase C1I88_09950 PF02686 Glu-tRNAGln amidotransferase C subunit C1I88_09990 PF13180 PDZ domain C1I88_09995 PF13180 PDZ domain C1I88_10005 PF01757 Acyltransferase family C1I88_10035 PF00155 Aminotransferase class I and II C1I88_10045 PF00248 Aldo/keto reductase family C1I88_10050 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1I88_10055 PF00248 Aldo/keto reductase family C1I88_10060 PF00149 Calcineurin-like phosphoesterase C1I88_10080 PF02525 Flavodoxin-like fold C1I88_10085 PF13411 MerR HTH family regulatory protein C1I88_10095 PF00128 Alpha amylase, catalytic domain C1I88_10095 PF09154 Domain of unknown function (DUF1939) C1I88_10110 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_10110 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_10130 PF04321 RmlD substrate binding domain C1I88_10155 PF10672 S-adenosylmethionine-dependent methyltransferase C1I88_10155 PF17785 PUA-like domain C1I88_10160 PF02585 GlcNAc-PI de-N-acetylase C1I88_10160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C1I88_10175 PF01728 FtsJ-like methyltransferase C1I88_10175 PF01479 S4 domain C1I88_10185 PF02678 Pirin C1I88_10185 PF17954 Quercetinase C-terminal cupin domain C1I88_10205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1I88_10205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1I88_10215 PF07882 L-fucose isomerase, second N-terminal domain C1I88_10215 PF07881 L-fucose isomerase, first N-terminal domain C1I88_10215 PF02952 L-fucose isomerase, C-terminal domain C1I88_10220 PF07690 Major Facilitator Superfamily C1I88_10230 PF14873 N-terminal domain of BNR-repeat neuraminidase C1I88_10230 PF13859 BNR repeat-like domain C1I88_10235 PF04542 Sigma-70 region 2 C1I88_10235 PF08281 Sigma-70, region 4 C1I88_10250 PF02583 Metal-sensitive transcriptional repressor C1I88_10255 PF00403 Heavy-metal-associated domain C1I88_10260 PF13667 ThiC-associated domain C1I88_10260 PF01964 Radical SAM ThiC family C1I88_10280 PF17820 PDZ domain C1I88_10280 PF13180 PDZ domain C1I88_10290 PF01966 HD domain C1I88_10290 PF13286 Phosphohydrolase-associated domain C1I88_10300 PF00892 EamA-like transporter family C1I88_10315 PF01168 Alanine racemase, N-terminal domain C1I88_10315 PF00842 Alanine racemase, C-terminal domain C1I88_10325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1I88_10325 PF00005 ABC transporter C1I88_10330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1I88_10335 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_10335 PF12911 N-terminal TM domain of oligopeptide transport permease C C1I88_10345 PF00528 Binding-protein-dependent transport system inner membrane component C1I88_10360 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1I88_10360 PF02558 Ketopantoate reductase PanE/ApbA C1I88_10365 PF01268 Formate--tetrahydrofolate ligase C1I88_10370 PF06940 Domain of unknown function (DUF1287) C1I88_10375 PF02844 Phosphoribosylglycinamide synthetase, N domain C1I88_10375 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1I88_10375 PF02843 Phosphoribosylglycinamide synthetase, C domain C1I88_10380 PF00436 Single-strand binding protein family C1I88_10390 PF01618 MotA/TolQ/ExbB proton channel family C1I88_10400 PF01327 Polypeptide deformylase C1I88_10410 PF13439 Glycosyltransferase Family 4 C1I88_10410 PF00534 Glycosyl transferases group 1 C1I88_10415 PF01055 Glycosyl hydrolases family 31 C1I88_10415 PF16338 Domain of unknown function (DUF4968) C1I88_10415 PF13802 Galactose mutarotase-like C1I88_10415 PF17137 Domain of unknown function (DUF5110) C1I88_10435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1I88_10435 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C1I88_10445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1I88_10455 PF01757 Acyltransferase family C1I88_10460 PF00180 Isocitrate/isopropylmalate dehydrogenase C1I88_10480 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1I88_10480 PF10996 Beta-Casp domain C1I88_10480 PF00753 Metallo-beta-lactamase superfamily C1I88_10485 PF02223 Thymidylate kinase C1I88_10490 PF06508 Queuosine biosynthesis protein QueC C1I88_10495 PF14489 QueF-like protein C1I88_10500 PF00924 Mechanosensitive ion channel C1I88_10505 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1I88_10510 PF00902 Sec-independent protein translocase protein (TatC) C1I88_10515 PF02673 Bacitracin resistance protein BacA C1I88_10535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1I88_10550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1I88_10555 PF00216 Bacterial DNA-binding protein C1I88_10560 PF01264 Chorismate synthase C1I88_10570 PF00175 Oxidoreductase NAD-binding domain C1I88_10570 PF00258 Flavodoxin C1I88_10570 PF00667 FAD binding domain C1I88_10580 PF00149 Calcineurin-like phosphoesterase C1I88_10600 PF02086 D12 class N6 adenine-specific DNA methyltransferase C1I88_10605 PF02899 Phage integrase, N-terminal SAM-like domain C1I88_10605 PF00589 Phage integrase family C1I88_10625 PF00465 Iron-containing alcohol dehydrogenase C1I88_10630 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1I88_10645 PF07977 FabA-like domain C1I88_10645 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C1I88_10650 PF00483 Nucleotidyl transferase C1I88_10660 PF00795 Carbon-nitrogen hydrolase C1I88_10675 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_10675 PF03173 Putative carbohydrate binding domain C1I88_10675 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C1I88_10675 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_10690 PF01578 Cytochrome C assembly protein C1I88_10700 PF01497 Periplasmic binding protein C1I88_10705 PF00005 ABC transporter C1I88_10710 PF01032 FecCD transport family C1I88_10715 PF01032 FecCD transport family C1I88_10750 PF01612 3'-5' exonuclease C1I88_10750 PF00476 DNA polymerase family A C1I88_10750 PF01367 5'-3' exonuclease, C-terminal SAM fold C1I88_10750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1I88_10765 PF00206 Lyase C1I88_10765 PF10397 Adenylosuccinate lyase C-terminus C1I88_10775 PF01546 Peptidase family M20/M25/M40 C1I88_10775 PF07687 Peptidase dimerisation domain C1I88_10795 PF00701 Dihydrodipicolinate synthetase family C1I88_10815 PF00425 chorismate binding enzyme C1I88_10820 PF00117 Glutamine amidotransferase class-I C1I88_10825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1I88_10825 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1I88_10840 PF02540 NAD synthase C1I88_10840 PF00958 GMP synthase C terminal domain C1I88_10840 PF00117 Glutamine amidotransferase class-I C1I88_10845 PF04073 Aminoacyl-tRNA editing domain C1I88_10880 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1I88_10880 PF00809 Pterin binding enzyme C1I88_10880 PF02574 Homocysteine S-methyltransferase C1I88_10880 PF02310 B12 binding domain C1I88_10880 PF02607 B12 binding domain C1I88_10885 PF06738 Putative threonine/serine exporter C1I88_10890 PF12821 Threonine/Serine exporter, ThrE C1I88_10890 PF06738 Putative threonine/serine exporter C1I88_10895 PF02384 N-6 DNA Methylase C1I88_10905 PF01420 Type I restriction modification DNA specificity domain C1I88_10915 PF02899 Phage integrase, N-terminal SAM-like domain C1I88_10915 PF00589 Phage integrase family C1I88_10925 PF18766 SWI2/SNF2 ATPase C1I88_10925 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C1I88_10925 PF11867 Domain of unknown function (DUF3387) C1I88_10935 PF00742 Homoserine dehydrogenase C1I88_10935 PF03447 Homoserine dehydrogenase, NAD binding domain C1I88_10935 PF01842 ACT domain C1I88_10940 PF13840 ACT domain C1I88_10940 PF01842 ACT domain C1I88_10940 PF00696 Amino acid kinase family C1I88_10950 PF09529 Integral membrane protein (intg_mem_TP0381) C1I88_10960 PF02867 Ribonucleotide reductase, barrel domain C1I88_10960 PF08471 Class II vitamin B12-dependent ribonucleotide reductase C1I88_10975 PF08501 Shikimate dehydrogenase substrate binding domain C1I88_10975 PF01488 Shikimate / quinate 5-dehydrogenase C1I88_10975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1I88_10980 PF00730 HhH-GPD superfamily base excision DNA repair protein C1I88_10980 PF14815 NUDIX domain C1I88_10985 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C1I88_10990 PF02896 PEP-utilising enzyme, TIM barrel domain C1I88_10990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C1I88_10990 PF00391 PEP-utilising enzyme, mobile domain C1I88_11000 PF00342 Phosphoglucose isomerase C1I88_11010 PF17785 PUA-like domain C1I88_11010 PF10672 S-adenosylmethionine-dependent methyltransferase C1I88_11015 PF02310 B12 binding domain C1I88_11015 PF01642 Methylmalonyl-CoA mutase C1I88_11020 PF01642 Methylmalonyl-CoA mutase C1I88_11050 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1I88_11050 PF03807 NADP oxidoreductase coenzyme F420-dependent C1I88_11055 PF03352 Methyladenine glycosylase C1I88_11075 PF01212 Beta-eliminating lyase C1I88_11095 PF03483 B3/4 domain C1I88_11095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1I88_11095 PF03484 tRNA synthetase B5 domain C1I88_11095 PF01588 Putative tRNA binding domain C1I88_11095 PF03147 Ferredoxin-fold anticodon binding domain C1I88_11100 PF01409 tRNA synthetases class II core domain (F) C1I88_11100 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1I88_11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1I88_11120 PF00183 Hsp90 protein C1I88_11125 PF07885 Ion channel C1I88_11150 PF00842 Alanine racemase, C-terminal domain C1I88_11150 PF01168 Alanine racemase, N-terminal domain C1I88_11155 PF02082 Transcriptional regulator C1I88_11160 PF01053 Cys/Met metabolism PLP-dependent enzyme C1I88_11165 PF00291 Pyridoxal-phosphate dependent enzyme C1I88_11170 PF02581 Thiamine monophosphate synthase C1I88_11175 PF02110 Hydroxyethylthiazole kinase family C1I88_11190 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_11190 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_11195 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_11195 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_11205 PF00293 NUDIX domain C1I88_11220 PF02075 Crossover junction endodeoxyribonuclease RuvC C1I88_11225 PF00271 Helicase conserved C-terminal domain C1I88_11225 PF00270 DEAD/DEAH box helicase C1I88_11230 PF00753 Metallo-beta-lactamase superfamily C1I88_11235 PF04909 Amidohydrolase C1I88_11250 PF13533 Biotin-lipoyl like C1I88_11255 PF00873 AcrB/AcrD/AcrF family C1I88_11260 PF00186 Dihydrofolate reductase C1I88_11265 PF00303 Thymidylate synthase C1I88_11270 PF13396 Phospholipase_D-nuclease N-terminal C1I88_11270 PF13091 PLD-like domain C1I88_11275 PF02436 Conserved carboxylase domain C1I88_11275 PF00682 HMGL-like C1I88_11275 PF00364 Biotin-requiring enzyme C1I88_11285 PF01554 MatE C1I88_11290 PF01883 Iron-sulfur cluster assembly protein C1I88_11290 PF10609 NUBPL iron-transfer P-loop NTPase C1I88_11305 PF08502 LeuA allosteric (dimerisation) domain C1I88_11305 PF00682 HMGL-like C1I88_11310 PF01432 Peptidase family M3 C1I88_11315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C1I88_11320 PF00873 AcrB/AcrD/AcrF family C1I88_11325 PF02321 Outer membrane efflux protein C1I88_11360 PF00654 Voltage gated chloride channel C1I88_11385 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1I88_11385 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1I88_11390 PF02684 Lipid-A-disaccharide synthetase C1I88_11395 PF09335 SNARE associated Golgi protein C1I88_11635 PF00171 Aldehyde dehydrogenase family C1I88_11655 PF18011 C-terminal domain found in long catalases C1I88_11655 PF06628 Catalase-related immune-responsive C1I88_11655 PF00199 Catalase C1I88_11670 PF01578 Cytochrome C assembly protein C1I88_11675 PF02915 Rubrerythrin C1I88_11680 PF13302 Acetyltransferase (GNAT) domain C1I88_11690 PF17854 FtsK alpha domain C1I88_11690 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C1I88_11690 PF09397 Ftsk gamma domain C1I88_11690 PF01580 FtsK/SpoIIIE family C1I88_11695 PF02563 Polysaccharide biosynthesis/export protein C1I88_11695 PF10531 SLBB domain C1I88_11700 PF02706 Chain length determinant protein C1I88_11700 PF13807 G-rich domain on putative tyrosine kinase C1I88_11700 PF13614 AAA domain C1I88_11710 PF02397 Bacterial sugar transferase C1I88_11715 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1I88_11725 PF00535 Glycosyl transferase family 2 C1I88_11730 PF04488 Glycosyltransferase sugar-binding region containing DXD motif C1I88_11745 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 C1I88_11745 PF00535 Glycosyl transferase family 2 C1I88_11760 PF13439 Glycosyltransferase Family 4 C1I88_11760 PF00534 Glycosyl transferases group 1 C1I88_11770 PF00535 Glycosyl transferase family 2 C1I88_11790 PF00534 Glycosyl transferases group 1 C1I88_11790 PF13439 Glycosyltransferase Family 4 C1I88_11825 PF01636 Phosphotransferase enzyme family C1I88_11830 PF05025 RbsD / FucU transport protein family C1I88_11835 PF00155 Aminotransferase class I and II C1I88_11840 PF09334 tRNA synthetases class I (M) C1I88_11840 PF01588 Putative tRNA binding domain C1I88_11840 PF08264 Anticodon-binding domain of tRNA C1I88_11845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1I88_11865 PF01515 Phosphate acetyl/butaryl transferase C1I88_11865 PF00390 Malic enzyme, N-terminal domain C1I88_11865 PF03949 Malic enzyme, NAD binding domain C1I88_11875 PF00722 Glycosyl hydrolases family 16 C1I88_11880 PF00933 Glycosyl hydrolase family 3 N terminal domain C1I88_11900 PF04055 Radical SAM superfamily C1I88_11900 PF06969 HemN C-terminal domain C1I88_11910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1I88_11910 PF02403 Seryl-tRNA synthetase N-terminal domain C1I88_11915 PF08240 Alcohol dehydrogenase GroES-like domain C1I88_11915 PF00107 Zinc-binding dehydrogenase C1I88_11925 PF00795 Carbon-nitrogen hydrolase C1I88_11930 PF07726 ATPase family associated with various cellular activities (AAA) C1I88_11930 PF17863 AAA lid domain C1I88_11940 PF01195 Peptidyl-tRNA hydrolase C1I88_11945 PF00905 Penicillin binding protein transpeptidase domain C1I88_11945 PF00912 Transglycosylase C1I88_11960 PF00709 Adenylosuccinate synthetase C1I88_11980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C1I88_11980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1I88_11985 PF00374 Nickel-dependent hydrogenase C1I88_11995 PF01750 Hydrogenase maturation protease C1I88_12000 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1I88_12025 PF00881 Nitroreductase family C1I88_12030 PF00155 Aminotransferase class I and II C1I88_12050 PF07549 SecD/SecF GG Motif C1I88_12050 PF02355 Protein export membrane protein C1I88_12065 PF05681 Fumarate hydratase (Fumerase) C1I88_12065 PF05683 Fumarase C-terminus C1I88_12085 PF07691 PA14 domain C1I88_12085 PF02838 Glycosyl hydrolase family 20, domain 2 C1I88_12085 PF00728 Glycosyl hydrolase family 20, catalytic domain C1I88_12090 PF02978 Signal peptide binding domain C1I88_12090 PF00448 SRP54-type protein, GTPase domain C1I88_12090 PF02881 SRP54-type protein, helical bundle domain C1I88_12180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C1I88_12185 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C1I88_12200 PF13193 AMP-binding enzyme C-terminal domain C1I88_12200 PF00501 AMP-binding enzyme C1I88_12230 PF01432 Peptidase family M3 C1I88_12240 PF05746 DALR anticodon binding domain C1I88_12240 PF00750 tRNA synthetases class I (R) C1I88_12240 PF03485 Arginyl tRNA synthetase N terminal domain C1I88_12275 PF00005 ABC transporter C1I88_12275 PF17755 UvrA DNA-binding domain C1I88_12275 PF17760 UvrA interaction domain C1I88_12280 PF07516 SecA Wing and Scaffold domain C1I88_12280 PF07517 SecA DEAD-like domain C1I88_12280 PF01043 SecA preprotein cross-linking domain C1I88_12280 PF02810 SEC-C motif C1I88_12285 PF00696 Amino acid kinase family C1I88_12285 PF00583 Acetyltransferase (GNAT) family C1I88_12300 PF00293 NUDIX domain