locus-tag class description A4V05_00035 PF01751 Toprim domain A4V05_00035 PF01131 DNA topoisomerase A4V05_00055 PF01471 Putative peptidoglycan binding domain A4V05_00055 PF01510 N-acetylmuramoyl-L-alanine amidase A4V05_00055 PF01476 LysM domain A4V05_00060 PF00330 Aconitase family (aconitate hydratase) A4V05_00060 PF00694 Aconitase C-terminal domain A4V05_00070 PF01625 Peptide methionine sulfoxide reductase A4V05_00070 PF01641 SelR domain A4V05_00085 PF01139 tRNA-splicing ligase RtcB A4V05_00095 PF07690 Major Facilitator Superfamily A4V05_00105 PF01923 Cobalamin adenosyltransferase A4V05_00115 PF17876 Cold shock domain A4V05_00115 PF08206 Ribonuclease B OB domain A4V05_00115 PF00773 RNB domain A4V05_00115 PF00575 S1 RNA binding domain A4V05_00120 PF12392 Collagenase A4V05_00120 PF01136 Peptidase family U32 A4V05_00125 PF08245 Mur ligase middle domain A4V05_00125 PF02875 Mur ligase family, glutamate ligase domain A4V05_00140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4V05_00145 PF00271 Helicase conserved C-terminal domain A4V05_00145 PF12419 SNF2 Helicase protein A4V05_00145 PF00176 SNF2 family N-terminal domain A4V05_00150 PF00149 Calcineurin-like phosphoesterase A4V05_00150 PF02872 5'-nucleotidase, C-terminal domain A4V05_00155 PF03330 Lytic transglycolase A4V05_00155 PF05036 Sporulation related domain A4V05_00160 PF01513 ATP-NAD kinase A4V05_00165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A4V05_00165 PF00467 KOW motif A4V05_00170 PF00673 ribosomal L5P family C-terminus A4V05_00170 PF00281 Ribosomal protein L5 A4V05_00175 PF00410 Ribosomal protein S8 A4V05_00180 PF00347 Ribosomal protein L6 A4V05_00185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A4V05_00190 PF03719 Ribosomal protein S5, C-terminal domain A4V05_00190 PF00333 Ribosomal protein S5, N-terminal domain A4V05_00195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A4V05_00200 PF00344 SecY translocase A4V05_00205 PF05191 Adenylate kinase, active site lid A4V05_00210 PF00557 Metallopeptidase family M24 A4V05_00225 PF13089 Polyphosphate kinase N-terminal domain A4V05_00225 PF17941 Polyphosphate kinase C-terminal domain 1 A4V05_00225 PF13090 Polyphosphate kinase C-terminal domain 2 A4V05_00225 PF02503 Polyphosphate kinase middle domain A4V05_00230 PF01501 Glycosyl transferase family 8 A4V05_00240 PF00535 Glycosyl transferase family 2 A4V05_00245 PF01531 Glycosyl transferase family 11 A4V05_00250 PF00535 Glycosyl transferase family 2 A4V05_00265 PF00535 Glycosyl transferase family 2 A4V05_00270 PF01965 DJ-1/PfpI family A4V05_00275 PF02817 e3 binding domain A4V05_00275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4V05_00275 PF00364 Biotin-requiring enzyme A4V05_00280 PF01979 Amidohydrolase family A4V05_00285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A4V05_00295 PF02554 Carbon starvation protein CstA A4V05_00310 PF00884 Sulfatase A4V05_00315 PF02033 Ribosome-binding factor A A4V05_00320 PF00009 Elongation factor Tu GTP binding domain A4V05_00320 PF11987 Translation-initiation factor 2 A4V05_00320 PF04760 Translation initiation factor IF-2, N-terminal region A4V05_00325 PF00575 S1 RNA binding domain A4V05_00325 PF08529 NusA N-terminal domain A4V05_00325 PF13184 NusA-like KH domain A4V05_00330 PF03372 Endonuclease/Exonuclease/phosphatase family A4V05_00335 PF01725 Ham1 family A4V05_00340 PF06962 Putative rRNA methylase A4V05_00345 PF04015 Domain of unknown function (DUF362) A4V05_00360 PF00005 ABC transporter A4V05_00360 PF01061 ABC-2 type transporter A4V05_00360 PF00498 FHA domain A4V05_00380 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) A4V05_00385 PF02397 Bacterial sugar transferase A4V05_00395 PF10509 Galactokinase galactose-binding signature A4V05_00395 PF08544 GHMP kinases C terminal A4V05_00395 PF00288 GHMP kinases N terminal domain A4V05_00400 PF00474 Sodium:solute symporter family A4V05_00410 PF00580 UvrD/REP helicase N-terminal domain A4V05_00410 PF13361 UvrD-like helicase C-terminal domain A4V05_00415 PF00551 Formyl transferase A4V05_00415 PF02911 Formyl transferase, C-terminal domain A4V05_00420 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase A4V05_00420 PF04101 Glycosyltransferase family 28 C-terminal domain A4V05_00425 PF03309 Type III pantothenate kinase A4V05_00430 PF00550 Phosphopantetheine attachment site A4V05_00445 PF02580 D-Tyr-tRNA(Tyr) deacylase A4V05_00475 PF13085 2Fe-2S iron-sulfur cluster binding domain A4V05_00480 PF02910 Fumarate reductase flavoprotein C-term A4V05_00480 PF00890 FAD binding domain A4V05_00540 PF00005 ABC transporter A4V05_00540 PF12848 ABC transporter A4V05_00540 PF16326 ABC transporter C-terminal domain A4V05_00550 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus A4V05_00550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A4V05_00560 PF01595 Cyclin M transmembrane N-terminal domain A4V05_00560 PF00571 CBS domain A4V05_00560 PF03471 Transporter associated domain A4V05_00575 PF12146 Serine aminopeptidase, S33 A4V05_00585 PF00248 Aldo/keto reductase family A4V05_00595 PF16338 Domain of unknown function (DUF4968) A4V05_00595 PF17137 Domain of unknown function (DUF5110) A4V05_00595 PF13802 Galactose mutarotase-like A4V05_00595 PF01055 Glycosyl hydrolases family 31 A4V05_00605 PF00072 Response regulator receiver domain A4V05_00605 PF04397 LytTr DNA-binding domain A4V05_00640 PF00561 alpha/beta hydrolase fold A4V05_00645 PF01914 MarC family integral membrane protein A4V05_00685 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A4V05_00690 PF12848 ABC transporter A4V05_00690 PF16326 ABC transporter C-terminal domain A4V05_00690 PF00005 ABC transporter A4V05_00700 PF00892 EamA-like transporter family A4V05_00710 PF09190 DALR domain A4V05_00710 PF01406 tRNA synthetases class I (C) catalytic domain A4V05_00715 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_00715 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_00720 PF16347 Domain of unknown function (DUF4976) A4V05_00720 PF00884 Sulfatase A4V05_00735 PF06421 GTP-binding protein LepA C-terminus A4V05_00735 PF00679 Elongation factor G C-terminus A4V05_00735 PF00009 Elongation factor Tu GTP binding domain A4V05_00735 PF03144 Elongation factor Tu domain 2 A4V05_00755 PF04998 RNA polymerase Rpb1, domain 5 A4V05_00755 PF04997 RNA polymerase Rpb1, domain 1 A4V05_00755 PF00623 RNA polymerase Rpb1, domain 2 A4V05_00755 PF04983 RNA polymerase Rpb1, domain 3 A4V05_00755 PF05000 RNA polymerase Rpb1, domain 4 A4V05_00760 PF04563 RNA polymerase beta subunit A4V05_00760 PF04561 RNA polymerase Rpb2, domain 2 A4V05_00760 PF04565 RNA polymerase Rpb2, domain 3 A4V05_00760 PF10385 RNA polymerase beta subunit external 1 domain A4V05_00760 PF04560 RNA polymerase Rpb2, domain 7 A4V05_00760 PF00562 RNA polymerase Rpb2, domain 6 A4V05_00765 PF00542 Ribosomal protein L7/L12 C-terminal domain A4V05_00765 PF16320 Ribosomal protein L7/L12 dimerisation domain A4V05_00770 PF00466 Ribosomal protein L10 A4V05_00775 PF00687 Ribosomal protein L1p/L10e family A4V05_00780 PF00298 Ribosomal protein L11, RNA binding domain A4V05_00780 PF03946 Ribosomal protein L11, N-terminal domain A4V05_00785 PF00467 KOW motif A4V05_00785 PF02357 Transcription termination factor nusG A4V05_00800 PF00009 Elongation factor Tu GTP binding domain A4V05_00800 PF03144 Elongation factor Tu domain 2 A4V05_00800 PF03143 Elongation factor Tu C-terminal domain A4V05_00810 PF00814 Glycoprotease family A4V05_00815 PF06689 ClpX C4-type zinc finger A4V05_00815 PF10431 C-terminal, D2-small domain, of ClpB protein A4V05_00815 PF07724 AAA domain (Cdc48 subfamily) A4V05_00820 PF00574 Clp protease A4V05_00825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4V05_00825 PF05697 Bacterial trigger factor protein (TF) A4V05_00825 PF05698 Bacterial trigger factor protein (TF) C-terminus A4V05_00830 PF07244 Surface antigen variable number repeat A4V05_00830 PF01103 Surface antigen A4V05_00840 PF02219 Methylenetetrahydrofolate reductase A4V05_00860 PF00873 AcrB/AcrD/AcrF family A4V05_00905 PF13649 Methyltransferase domain A4V05_00910 PF02772 S-adenosylmethionine synthetase, central domain A4V05_00910 PF02773 S-adenosylmethionine synthetase, C-terminal domain A4V05_00910 PF00438 S-adenosylmethionine synthetase, N-terminal domain A4V05_00915 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A4V05_00915 PF05221 S-adenosyl-L-homocysteine hydrolase A4V05_00935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4V05_00945 PF00884 Sulfatase A4V05_00945 PF16347 Domain of unknown function (DUF4976) A4V05_00950 PF00271 Helicase conserved C-terminal domain A4V05_00950 PF00270 DEAD/DEAH box helicase A4V05_00950 PF09382 RQC domain A4V05_00950 PF16124 RecQ zinc-binding A4V05_00950 PF00570 HRDC domain A4V05_00960 PF00534 Glycosyl transferases group 1 A4V05_00970 PF02910 Fumarate reductase flavoprotein C-term A4V05_00970 PF00890 FAD binding domain A4V05_00975 PF08032 RNA 2'-O ribose methyltransferase substrate binding A4V05_00975 PF00588 SpoU rRNA Methylase family A4V05_01025 PF07670 Nucleoside recognition A4V05_01025 PF02421 Ferrous iron transport protein B A4V05_01025 PF17910 FeoB cytosolic helical domain A4V05_01025 PF07664 Ferrous iron transport protein B C terminus A4V05_01040 PF14376 Haem-binding domain A4V05_01040 PF00034 Cytochrome c A4V05_01040 PF03150 Di-haem cytochrome c peroxidase A4V05_01045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A4V05_01045 PF04055 Radical SAM superfamily A4V05_01050 PF14437 MafB19-like deaminase A4V05_01055 PF00480 ROK family A4V05_01060 PF00403 Heavy-metal-associated domain A4V05_01065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4V05_01065 PF07498 Rho termination factor, N-terminal domain A4V05_01065 PF07497 Rho termination factor, RNA-binding domain A4V05_01070 PF01121 Dephospho-CoA kinase A4V05_01075 PF00263 Bacterial type II and III secretion system protein A4V05_01075 PF03958 Bacterial type II/III secretion system short domain A4V05_01100 PF05343 M42 glutamyl aminopeptidase A4V05_01105 PF01790 Prolipoprotein diacylglyceryl transferase A4V05_01115 PF05195 Aminopeptidase P, N-terminal domain A4V05_01115 PF00557 Metallopeptidase family M24 A4V05_01120 PF08029 HisG, C-terminal domain A4V05_01120 PF01634 ATP phosphoribosyltransferase A4V05_01135 PF00512 His Kinase A (phospho-acceptor) domain A4V05_01135 PF00989 PAS fold A4V05_01135 PF11808 Phosphate regulon sensor protein PhoR A4V05_01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_01140 PF00486 Transcriptional regulatory protein, C terminal A4V05_01140 PF00072 Response regulator receiver domain A4V05_01145 PF00920 Dehydratase family A4V05_01170 PF00884 Sulfatase A4V05_01205 PF16363 GDP-mannose 4,6 dehydratase A4V05_01210 PF00398 Ribosomal RNA adenine dimethylase A4V05_01230 PF01554 MatE A4V05_01235 PF02386 Cation transport protein A4V05_01250 PF13539 D-alanyl-D-alanine carboxypeptidase A4V05_01320 PF05593 RHS Repeat A4V05_01320 PF03527 RHS protein A4V05_01320 PF14220 Domain of unknown function (DUF4329) A4V05_01365 PF14220 Domain of unknown function (DUF4329) A4V05_01365 PF03527 RHS protein A4V05_01365 PF05593 RHS Repeat A4V05_01395 PF03814 Potassium-transporting ATPase A subunit A4V05_01405 PF02669 K+-transporting ATPase, c chain A4V05_01410 PF02702 Osmosensitive K+ channel His kinase sensor domain A4V05_01410 PF00512 His Kinase A (phospho-acceptor) domain A4V05_01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_01410 PF13492 GAF domain A4V05_01410 PF13493 Domain of unknown function (DUF4118) A4V05_01420 PF12867 DinB superfamily A4V05_01420 PF03781 Sulfatase-modifying factor enzyme 1 A4V05_01430 PF00753 Metallo-beta-lactamase superfamily A4V05_01430 PF16123 Hydroxyacylglutathione hydrolase C-terminus A4V05_01440 PF03793 PASTA domain A4V05_01440 PF00069 Protein kinase domain A4V05_01445 PF00248 Aldo/keto reductase family A4V05_01450 PF13411 MerR HTH family regulatory protein A4V05_01460 PF01212 Beta-eliminating lyase A4V05_01490 PF00005 ABC transporter A4V05_01500 PF17863 AAA lid domain A4V05_01500 PF07726 ATPase family associated with various cellular activities (AAA) A4V05_01505 PF07786 Protein of unknown function (DUF1624) A4V05_01505 PF04235 Protein of unknown function (DUF418) A4V05_01530 PF08338 Domain of unknown function (DUF1731) A4V05_01530 PF01370 NAD dependent epimerase/dehydratase family A4V05_01545 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A4V05_01545 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A4V05_01550 PF00005 ABC transporter A4V05_01555 PF00392 Bacterial regulatory proteins, gntR family A4V05_01555 PF07729 FCD domain A4V05_01570 PF00884 Sulfatase A4V05_01580 PF03952 Enolase, N-terminal domain A4V05_01580 PF00113 Enolase, C-terminal TIM barrel domain A4V05_01590 PF02424 ApbE family A4V05_01605 PF00830 Ribosomal L28 family A4V05_01620 PF03652 Holliday junction resolvase A4V05_01625 PF01050 Mannose-6-phosphate isomerase A4V05_01625 PF00483 Nucleotidyl transferase A4V05_01630 PF01255 Putative undecaprenyl diphosphate synthase A4V05_01635 PF00986 DNA gyrase B subunit, carboxyl terminus A4V05_01635 PF01751 Toprim domain A4V05_01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_01635 PF00204 DNA gyrase B A4V05_01640 PF00288 GHMP kinases N terminal domain A4V05_01640 PF08544 GHMP kinases C terminal A4V05_01650 PF06733 DEAD_2 A4V05_01650 PF13307 Helicase C-terminal domain A4V05_01655 PF00005 ABC transporter A4V05_01680 PF00696 Amino acid kinase family A4V05_01685 PF01544 CorA-like Mg2+ transporter protein A4V05_01690 PF01281 Ribosomal protein L9, N-terminal domain A4V05_01690 PF03948 Ribosomal protein L9, C-terminal domain A4V05_01695 PF01808 AICARFT/IMPCHase bienzyme A4V05_01695 PF02142 MGS-like domain A4V05_01700 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A4V05_01705 PF01648 4'-phosphopantetheinyl transferase superfamily A4V05_01715 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain A4V05_01715 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain A4V05_01720 PF01471 Putative peptidoglycan binding domain A4V05_01720 PF01510 N-acetylmuramoyl-L-alanine amidase A4V05_01720 PF01476 LysM domain A4V05_01725 PF17191 RecG wedge domain A4V05_01725 PF00271 Helicase conserved C-terminal domain A4V05_01725 PF00270 DEAD/DEAH box helicase A4V05_01735 PF13247 4Fe-4S dicluster domain A4V05_01735 PF00037 4Fe-4S binding domain A4V05_01745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4V05_01755 PF01761 3-dehydroquinate synthase A4V05_01810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A4V05_01820 PF07085 DRTGG domain A4V05_01820 PF01368 DHH family A4V05_01820 PF00571 CBS domain A4V05_01820 PF02833 DHHA2 domain A4V05_01830 PF02575 YbaB/EbfC DNA-binding family A4V05_01855 PF04002 RadC-like JAB domain A4V05_01860 PF01256 Carbohydrate kinase A4V05_01860 PF03853 YjeF-related protein N-terminus A4V05_01865 PF01176 Translation initiation factor 1A / IF-1 A4V05_01870 PF00572 Ribosomal protein L13 A4V05_01875 PF00380 Ribosomal protein S9/S16 A4V05_01880 PF02590 Predicted SPOUT methyltransferase A4V05_01885 PF01541 GIY-YIG catalytic domain A4V05_01885 PF02151 UvrB/uvrC motif A4V05_01885 PF08459 UvrC Helix-hairpin-helix N-terminal A4V05_01890 PF01618 MotA/TolQ/ExbB proton channel family A4V05_01895 PF02472 Biopolymer transport protein ExbD/TolR A4V05_01905 PF00905 Penicillin binding protein transpeptidase domain A4V05_01905 PF00912 Transglycosylase A4V05_01905 PF17092 Penicillin-binding protein OB-like domain A4V05_01910 PF00459 Inositol monophosphatase family A4V05_01915 PF02542 YgbB family A4V05_01925 PF01238 Phosphomannose isomerase type I A4V05_01935 PF03553 Na+/H+ antiporter family A4V05_01940 PF01370 NAD dependent epimerase/dehydratase family A4V05_01945 PF16363 GDP-mannose 4,6 dehydratase A4V05_01950 PF00117 Glutamine amidotransferase class-I A4V05_01950 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A4V05_01955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4V05_01955 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4V05_01955 PF02142 MGS-like domain A4V05_01960 PF00120 Glutamine synthetase, catalytic domain A4V05_01960 PF12437 Glutamine synthetase type III N terminal A4V05_01960 PF18318 Glutamine synthetase C-terminal domain A4V05_01965 PF01493 GXGXG motif A4V05_01965 PF01645 Conserved region in glutamate synthase A4V05_01965 PF04898 Glutamate synthase central domain A4V05_01965 PF00310 Glutamine amidotransferases class-II A4V05_01975 PF02096 60Kd inner membrane protein A4V05_01975 PF14849 YidC periplasmic domain A4V05_01980 PF01809 Putative membrane protein insertion efficiency factor A4V05_01985 PF00825 Ribonuclease P A4V05_01990 PF00468 Ribosomal protein L34 A4V05_01995 PF12437 Glutamine synthetase type III N terminal A4V05_01995 PF00120 Glutamine synthetase, catalytic domain A4V05_01995 PF18318 Glutamine synthetase C-terminal domain A4V05_02000 PF07859 alpha/beta hydrolase fold A4V05_02000 PF13472 GDSL-like Lipase/Acylhydrolase family A4V05_02010 PF01263 Aldose 1-epimerase A4V05_02020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A4V05_02020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A4V05_02025 PF00348 Polyprenyl synthetase A4V05_02030 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4V05_02030 PF02774 Semialdehyde dehydrogenase, dimerisation domain A4V05_02050 PF03313 Serine dehydratase alpha chain A4V05_02050 PF03315 Serine dehydratase beta chain A4V05_02055 PF00085 Thioredoxin A4V05_02055 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4V05_02110 PF02254 TrkA-N domain A4V05_02110 PF00999 Sodium/hydrogen exchanger family A4V05_02115 PF00149 Calcineurin-like phosphoesterase A4V05_02120 PF02073 Thermophilic metalloprotease (M29) A4V05_02125 PF00551 Formyl transferase A4V05_02130 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A4V05_02130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A4V05_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_02145 PF00986 DNA gyrase B subunit, carboxyl terminus A4V05_02145 PF00204 DNA gyrase B A4V05_02145 PF01751 Toprim domain A4V05_02150 PF00521 DNA gyrase/topoisomerase IV, subunit A A4V05_02150 PF03989 DNA gyrase C-terminal domain, beta-propeller A4V05_02160 PF01136 Peptidase family U32 A4V05_02165 PF03781 Sulfatase-modifying factor enzyme 1 A4V05_02185 PF01895 PhoU domain A4V05_02190 PF00005 ABC transporter A4V05_02195 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_02200 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_02205 PF12849 PBP superfamily domain A4V05_02210 PF00005 ABC transporter A4V05_02220 PF01263 Aldose 1-epimerase A4V05_02235 PF05193 Peptidase M16 inactive domain A4V05_02235 PF00675 Insulinase (Peptidase family M16) A4V05_02245 PF00132 Bacterial transferase hexapeptide (six repeats) A4V05_02245 PF12464 Maltose acetyltransferase A4V05_02295 PF01765 Ribosome recycling factor A4V05_02300 PF00696 Amino acid kinase family A4V05_02305 PF05552 Conserved TM helix A4V05_02305 PF00924 Mechanosensitive ion channel A4V05_02310 PF10417 C-terminal domain of 1-Cys peroxiredoxin A4V05_02310 PF00578 AhpC/TSA family A4V05_02315 PF00209 Sodium:neurotransmitter symporter family A4V05_02340 PF00109 Beta-ketoacyl synthase, N-terminal domain A4V05_02340 PF02801 Beta-ketoacyl synthase, C-terminal domain A4V05_02345 PF01641 SelR domain A4V05_02350 PF00817 impB/mucB/samB family A4V05_02350 PF11799 impB/mucB/samB family C-terminal domain A4V05_02385 PF00005 ABC transporter A4V05_02390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4V05_02395 PF01411 tRNA synthetases class II (A) A4V05_02395 PF02272 DHHA1 domain A4V05_02395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A4V05_02400 PF01066 CDP-alcohol phosphatidyltransferase A4V05_02410 PF00809 Pterin binding enzyme A4V05_02420 PF04551 GcpE protein A4V05_02445 PF00109 Beta-ketoacyl synthase, N-terminal domain A4V05_02445 PF02801 Beta-ketoacyl synthase, C-terminal domain A4V05_02450 PF00155 Aminotransferase class I and II A4V05_02475 PF02938 GAD domain A4V05_02475 PF00152 tRNA synthetases class II (D, K and N) A4V05_02475 PF01336 OB-fold nucleic acid binding domain A4V05_02480 PF13393 Histidyl-tRNA synthetase A4V05_02480 PF03129 Anticodon binding domain A4V05_02485 PF02492 CobW/HypB/UreG, nucleotide-binding domain A4V05_02490 PF07503 HypF finger A4V05_02490 PF01300 Telomere recombination A4V05_02490 PF00708 Acylphosphatase A4V05_02490 PF17788 HypF Kae1-like domain A4V05_02495 PF01455 HupF/HypC family A4V05_02500 PF01924 Hydrogenase formation hypA family A4V05_02505 PF00586 AIR synthase related protein, N-terminal domain A4V05_02505 PF02769 AIR synthase related protein, C-terminal domain A4V05_02525 PF00012 Hsp70 protein A4V05_02530 PF00166 Chaperonin 10 Kd subunit A4V05_02535 PF00118 TCP-1/cpn60 chaperonin family A4V05_02570 PF13614 AAA domain A4V05_02570 PF02706 Chain length determinant protein A4V05_02570 PF13807 G-rich domain on putative tyrosine kinase A4V05_02585 PF01330 RuvA N terminal domain A4V05_02585 PF07499 RuvA, C-terminal domain A4V05_02590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A4V05_02590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4V05_02595 PF00162 Phosphoglycerate kinase A4V05_02610 PF14508 Glycosyl-hydrolase 97 N-terminal A4V05_02610 PF10566 Glycoside hydrolase 97 A4V05_02610 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation A4V05_02615 PF08239 Bacterial SH3 domain A4V05_02615 PF00069 Protein kinase domain A4V05_02620 PF03461 TRCF domain A4V05_02620 PF00270 DEAD/DEAH box helicase A4V05_02620 PF00271 Helicase conserved C-terminal domain A4V05_02620 PF02559 CarD-like/TRCF domain A4V05_02620 PF17757 UvrB interaction domain A4V05_02630 PF07690 Major Facilitator Superfamily A4V05_02645 PF02811 PHP domain A4V05_02650 PF01515 Phosphate acetyl/butaryl transferase A4V05_02650 PF07085 DRTGG domain A4V05_02655 PF11734 TilS substrate C-terminal domain A4V05_02655 PF01171 PP-loop family A4V05_02660 PF01197 Ribosomal protein L31 A4V05_02695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A4V05_02695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A4V05_02695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A4V05_02700 PF00056 lactate/malate dehydrogenase, NAD binding domain A4V05_02700 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A4V05_02725 PF00881 Nitroreductase family A4V05_02730 PF00849 RNA pseudouridylate synthase A4V05_02735 PF00849 RNA pseudouridylate synthase A4V05_02735 PF01479 S4 domain A4V05_02760 PF00005 ABC transporter A4V05_02775 PF02774 Semialdehyde dehydrogenase, dimerisation domain A4V05_02775 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4V05_02780 PF01960 ArgJ family A4V05_02805 PF00005 ABC transporter A4V05_02805 PF17760 UvrA interaction domain A4V05_02805 PF17755 UvrA DNA-binding domain A4V05_02830 PF00977 Histidine biosynthesis protein A4V05_02835 PF02594 Uncharacterised ACR, YggU family COG1872 A4V05_02840 PF01025 GrpE A4V05_02845 PF01556 DnaJ C terminal domain A4V05_02845 PF00226 DnaJ domain A4V05_02845 PF00684 DnaJ central domain A4V05_02850 PF04452 RNA methyltransferase A4V05_02860 PF13229 Right handed beta helix region A4V05_02870 PF10502 Signal peptidase, peptidase S26 A4V05_02875 PF01565 FAD binding domain A4V05_02875 PF02913 FAD linked oxidases, C-terminal domain A4V05_02900 PF14572 Phosphoribosyl synthetase-associated domain A4V05_02900 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A4V05_02905 PF14693 Ribosomal protein TL5, C-terminal domain A4V05_02905 PF01386 Ribosomal L25p family A4V05_02915 PF00475 Imidazoleglycerol-phosphate dehydratase A4V05_02920 PF00117 Glutamine amidotransferase class-I A4V05_02925 PF01250 Ribosomal protein S6 A4V05_02930 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A4V05_02945 PF07943 Penicillin-binding protein 5, C-terminal domain A4V05_02945 PF00768 D-alanyl-D-alanine carboxypeptidase A4V05_02950 PF00365 Phosphofructokinase A4V05_02960 PF02535 ZIP Zinc transporter A4V05_02980 PF00155 Aminotransferase class I and II A4V05_02985 PF03755 YicC-like family, N-terminal region A4V05_02985 PF08340 Domain of unknown function (DUF1732) A4V05_02990 PF00625 Guanylate kinase A4V05_02995 PF03600 Citrate transporter A4V05_02995 PF02080 TrkA-C domain A4V05_03000 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4V05_03015 PF01040 UbiA prenyltransferase family A4V05_03020 PF01487 Type I 3-dehydroquinase A4V05_03050 PF01522 Polysaccharide deacetylase A4V05_03050 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain A4V05_03055 PF02355 Protein export membrane protein A4V05_03055 PF07549 SecD/SecF GG Motif A4V05_03065 PF06750 Bacterial Peptidase A24 N-terminal domain A4V05_03065 PF01478 Type IV leader peptidase family A4V05_03075 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A4V05_03075 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A4V05_03075 PF01000 RNA polymerase Rpb3/RpoA insert domain A4V05_03080 PF01196 Ribosomal protein L17 A4V05_03085 PF00698 Acyl transferase domain A4V05_03095 PF13419 Haloacid dehalogenase-like hydrolase A4V05_03110 PF00691 OmpA family A4V05_03150 PF00176 SNF2 family N-terminal domain A4V05_03150 PF00271 Helicase conserved C-terminal domain A4V05_03160 PF01555 DNA methylase A4V05_03160 PF18273 Type III R-M EcoP15I C-terminal domain A4V05_03165 PF04851 Type III restriction enzyme, res subunit A4V05_03165 PF08774 VRR-NUC domain A4V05_03190 PF00248 Aldo/keto reductase family A4V05_03195 PF03030 Inorganic H+ pyrophosphatase A4V05_03215 PF04715 Anthranilate synthase component I, N terminal region A4V05_03215 PF00425 chorismate binding enzyme A4V05_03220 PF02885 Glycosyl transferase family, helical bundle domain A4V05_03220 PF00591 Glycosyl transferase family, a/b domain A4V05_03225 PF00218 Indole-3-glycerol phosphate synthase A4V05_03230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A4V05_03235 PF00291 Pyridoxal-phosphate dependent enzyme A4V05_03240 PF00290 Tryptophan synthase alpha chain A4V05_03260 PF00561 alpha/beta hydrolase fold A4V05_03265 PF00444 Ribosomal protein L36 A4V05_03275 PF04055 Radical SAM superfamily A4V05_03280 PF02901 Pyruvate formate lyase-like A4V05_03280 PF01228 Glycine radical A4V05_03315 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A4V05_03320 PF07690 Major Facilitator Superfamily A4V05_03340 PF00271 Helicase conserved C-terminal domain A4V05_03340 PF02151 UvrB/uvrC motif A4V05_03340 PF17757 UvrB interaction domain A4V05_03340 PF12344 Ultra-violet resistance protein B A4V05_03340 PF04851 Type III restriction enzyme, res subunit A4V05_03350 PF01632 Ribosomal protein L35 A4V05_03355 PF00453 Ribosomal protein L20 A4V05_03360 PF02163 Peptidase family M50 A4V05_03360 PF17820 PDZ domain A4V05_03375 PF13361 UvrD-like helicase C-terminal domain A4V05_03375 PF00580 UvrD/REP helicase N-terminal domain A4V05_03375 PF12705 PD-(D/E)XK nuclease superfamily A4V05_03390 PF00892 EamA-like transporter family A4V05_03395 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain A4V05_03395 PF01835 MG2 domain A4V05_03395 PF07678 A-macroglobulin TED domain A4V05_03395 PF00207 Alpha-2-macroglobulin family A4V05_03395 PF07703 Alpha-2-macroglobulin bait region domain A4V05_03400 PF00465 Iron-containing alcohol dehydrogenase A4V05_03410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4V05_03410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A4V05_03435 PF00285 Citrate synthase, C-terminal domain A4V05_03440 PF00588 SpoU rRNA Methylase family A4V05_03455 PF01668 SmpB protein A4V05_03465 PF00849 RNA pseudouridylate synthase A4V05_03475 PF00334 Nucleoside diphosphate kinase A4V05_03480 PF00535 Glycosyl transferase family 2 A4V05_03485 PF00535 Glycosyl transferase family 2 A4V05_03495 PF00482 Type II secretion system (T2SS), protein F A4V05_03500 PF00437 Type II/IV secretion system protein A4V05_03505 PF00437 Type II/IV secretion system protein A4V05_03510 PF01207 Dihydrouridine synthase (Dus) A4V05_03520 PF00155 Aminotransferase class I and II A4V05_03525 PF03023 Lipid II flippase MurJ A4V05_03530 PF01467 Cytidylyltransferase-like A4V05_03530 PF00294 pfkB family carbohydrate kinase A4V05_03535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A4V05_03535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A4V05_03545 PF02638 Glycosyl hydrolase-like 10 A4V05_03550 PF00731 AIR carboxylase A4V05_03555 PF01171 PP-loop family A4V05_03555 PF11734 TilS substrate C-terminal domain A4V05_03555 PF09179 TilS substrate binding domain A4V05_03560 PF01969 Protein of unknown function DUF111 A4V05_03565 PF00348 Polyprenyl synthetase A4V05_03570 PF00854 POT family A4V05_03580 PF01883 Iron-sulfur cluster assembly protein A4V05_03595 PF00361 Proton-conducting membrane transporter A4V05_03600 PF00361 Proton-conducting membrane transporter A4V05_03605 PF00361 Proton-conducting membrane transporter A4V05_03605 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A4V05_03610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A4V05_03615 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A4V05_03625 PF00146 NADH dehydrogenase A4V05_03630 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4V05_03630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A4V05_03630 PF01568 Molydopterin dinucleotide binding domain A4V05_03630 PF00384 Molybdopterin oxidoreductase A4V05_03635 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A4V05_03635 PF10531 SLBB domain A4V05_03635 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A4V05_03645 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A4V05_03655 PF01522 Polysaccharide deacetylase A4V05_03665 PF00677 Lumazine binding domain A4V05_03685 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat A4V05_03685 PF03797 Autotransporter beta-domain A4V05_03685 PF07548 Chlamydia polymorphic membrane protein middle domain A4V05_03690 PF02446 4-alpha-glucanotransferase A4V05_03705 PF18693 TRAM domain A4V05_03705 PF04055 Radical SAM superfamily A4V05_03705 PF00919 Uncharacterized protein family UPF0004 A4V05_03710 PF01972 Serine dehydrogenase proteinase A4V05_03710 PF01957 NfeD-like C-terminal, partner-binding A4V05_03715 PF01807 CHC2 zinc finger A4V05_03715 PF08275 DNA primase catalytic core, N-terminal domain A4V05_03715 PF10410 DnaB-helicase binding domain of primase A4V05_03720 PF04542 Sigma-70 region 2 A4V05_03720 PF04545 Sigma-70, region 4 A4V05_03720 PF04539 Sigma-70 region 3 A4V05_03720 PF00140 Sigma-70 factor, region 1.2 A4V05_03720 PF03979 Sigma-70 factor, region 1.1 A4V05_03725 PF01427 D-ala-D-ala dipeptidase A4V05_03740 PF00464 Serine hydroxymethyltransferase A4V05_03745 PF00595 PDZ domain A4V05_03745 PF11818 C-terminal domain of tail specific protease (DUF3340) A4V05_03745 PF03572 Peptidase family S41 A4V05_03745 PF17804 Tail specific protease N-terminal domain A4V05_03760 PF00270 DEAD/DEAH box helicase A4V05_03760 PF00271 Helicase conserved C-terminal domain A4V05_03760 PF04408 Helicase associated domain (HA2) A4V05_03760 PF08482 ATP-dependent helicase C-terminal A4V05_03775 PF12627 Probable RNA and SrmB- binding site of polymerase A A4V05_03775 PF13735 tRNA nucleotidyltransferase domain 2 putative A4V05_03775 PF01743 Poly A polymerase head domain A4V05_03785 PF03958 Bacterial type II/III secretion system short domain A4V05_03785 PF00263 Bacterial type II and III secretion system protein A4V05_03800 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A4V05_03800 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A4V05_03820 PF01207 Dihydrouridine synthase (Dus) A4V05_03825 PF02401 LytB protein A4V05_03835 PF01649 Ribosomal protein S20 A4V05_03840 PF13419 Haloacid dehalogenase-like hydrolase A4V05_03845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4V05_03845 PF00205 Thiamine pyrophosphate enzyme, central domain A4V05_03845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4V05_03850 PF02666 Phosphatidylserine decarboxylase A4V05_03855 PF00834 Ribulose-phosphate 3 epimerase family A4V05_03860 PF00133 tRNA synthetases class I (I, L, M and V) A4V05_03860 PF13603 Leucyl-tRNA synthetase, Domain 2 A4V05_03860 PF09334 tRNA synthetases class I (M) A4V05_03860 PF08264 Anticodon-binding domain of tRNA A4V05_03865 PF00884 Sulfatase A4V05_03875 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A4V05_03880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A4V05_03880 PF17810 Arginine decarboxylase helical bundle domain A4V05_03880 PF17944 Arginine decarboxylase C-terminal helical extension A4V05_03895 PF02929 Beta galactosidase small chain A4V05_03895 PF16353 Domain of unknown function(DUF4981) A4V05_03895 PF00703 Glycosyl hydrolases family 2 A4V05_03895 PF02837 Glycosyl hydrolases family 2, sugar binding domain A4V05_03895 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A4V05_03900 PF00703 Glycosyl hydrolases family 2 A4V05_03900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A4V05_03900 PF02837 Glycosyl hydrolases family 2, sugar binding domain A4V05_03905 PF12002 MgsA AAA+ ATPase C terminal A4V05_03905 PF16193 AAA C-terminal domain A4V05_03905 PF00004 ATPase family associated with various cellular activities (AAA) A4V05_03910 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_03910 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_03910 PF07691 PA14 domain A4V05_03925 PF00365 Phosphofructokinase A4V05_03950 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase A4V05_03960 PF02654 Cobalamin-5-phosphate synthase A4V05_03965 PF02277 Phosphoribosyltransferase A4V05_03970 PF03186 CobD/Cbib protein A4V05_03975 PF07685 CobB/CobQ-like glutamine amidotransferase domain A4V05_03975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A4V05_03975 PF00155 Aminotransferase class I and II A4V05_03985 PF07715 TonB-dependent Receptor Plug Domain A4V05_03985 PF00593 TonB dependent receptor A4V05_03995 PF01301 Glycosyl hydrolases family 35 A4V05_04010 PF01979 Amidohydrolase family A4V05_04015 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4V05_04015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A4V05_04030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4V05_04030 PF02817 e3 binding domain A4V05_04030 PF00364 Biotin-requiring enzyme A4V05_04035 PF16078 2-oxoglutarate dehydrogenase N-terminus A4V05_04035 PF02779 Transketolase, pyrimidine binding domain A4V05_04035 PF00676 Dehydrogenase E1 component A4V05_04035 PF16870 2-oxoglutarate dehydrogenase C-terminal A4V05_04040 PF02322 Cytochrome bd terminal oxidase subunit II A4V05_04045 PF01654 Cytochrome bd terminal oxidase subunit I A4V05_04055 PF01451 Low molecular weight phosphotyrosine protein phosphatase A4V05_04070 PF00291 Pyridoxal-phosphate dependent enzyme A4V05_04075 PF01047 MarR family A4V05_04080 PF00210 Ferritin-like domain A4V05_04200 PF03796 DnaB-like helicase C terminal domain A4V05_04200 PF00772 DnaB-like helicase N terminal domain A4V05_04325 PF02698 DUF218 domain A4V05_04355 PF16124 RecQ zinc-binding A4V05_04355 PF09382 RQC domain A4V05_04355 PF00570 HRDC domain A4V05_04355 PF00271 Helicase conserved C-terminal domain A4V05_04355 PF00270 DEAD/DEAH box helicase A4V05_04370 PF02629 CoA binding domain A4V05_04370 PF00549 CoA-ligase A4V05_04375 PF00549 CoA-ligase A4V05_04375 PF08442 ATP-grasp domain A4V05_04410 PF13742 OB-fold nucleic acid binding domain A4V05_04410 PF02601 Exonuclease VII, large subunit A4V05_04415 PF01553 Acyltransferase A4V05_04415 PF00501 AMP-binding enzyme A4V05_04445 PF01370 NAD dependent epimerase/dehydratase family A4V05_04450 PF00512 His Kinase A (phospho-acceptor) domain A4V05_04450 PF00672 HAMP domain A4V05_04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_04455 PF00486 Transcriptional regulatory protein, C terminal A4V05_04455 PF00072 Response regulator receiver domain A4V05_04465 PF00490 Delta-aminolevulinic acid dehydratase A4V05_04480 PF03129 Anticodon binding domain A4V05_04480 PF02824 TGS domain A4V05_04480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4V05_04480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A4V05_04485 PF00707 Translation initiation factor IF-3, C-terminal domain A4V05_04485 PF05198 Translation initiation factor IF-3, N-terminal domain A4V05_04495 PF07786 Protein of unknown function (DUF1624) A4V05_04495 PF04235 Protein of unknown function (DUF418) A4V05_04500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A4V05_04500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A4V05_04500 PF13288 DXP reductoisomerase C-terminal domain A4V05_04505 PF01467 Cytidylyltransferase-like A4V05_04520 PF01704 UTP--glucose-1-phosphate uridylyltransferase A4V05_04540 PF04991 LicD family A4V05_04545 PF01467 Cytidylyltransferase-like A4V05_04555 PF04991 LicD family A4V05_04560 PF01467 Cytidylyltransferase-like A4V05_04570 PF00155 Aminotransferase class I and II A4V05_04575 PF04991 LicD family A4V05_04580 PF02806 Alpha amylase, C-terminal all-beta domain A4V05_04580 PF00128 Alpha amylase, catalytic domain A4V05_04580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A4V05_04590 PF02657 Fe-S metabolism associated domain A4V05_04595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A4V05_04595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A4V05_04600 PF00884 Sulfatase A4V05_04605 PF02896 PEP-utilising enzyme, TIM barrel domain A4V05_04605 PF00391 PEP-utilising enzyme, mobile domain A4V05_04605 PF05524 PEP-utilising enzyme, N-terminal A4V05_04610 PF00381 PTS HPr component phosphorylation site A4V05_04615 PF07475 HPr Serine kinase C-terminal domain A4V05_04615 PF02603 HPr Serine kinase N terminus A4V05_04620 PF07687 Peptidase dimerisation domain A4V05_04620 PF01546 Peptidase family M20/M25/M40 A4V05_04625 PF00005 ABC transporter A4V05_04640 PF01168 Alanine racemase, N-terminal domain A4V05_04655 PF00535 Glycosyl transferase family 2 A4V05_04665 PF04379 ApaG domain A4V05_04670 PF00176 SNF2 family N-terminal domain A4V05_04670 PF00271 Helicase conserved C-terminal domain A4V05_04670 PF04434 SWIM zinc finger A4V05_04675 PF01037 Lrp/AsnC ligand binding domain A4V05_04680 PF00155 Aminotransferase class I and II A4V05_04695 PF03129 Anticodon binding domain A4V05_04695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4V05_04705 PF00248 Aldo/keto reductase family A4V05_04720 PF13519 von Willebrand factor type A domain A4V05_04735 PF07726 ATPase family associated with various cellular activities (AAA) A4V05_04735 PF17863 AAA lid domain A4V05_04740 PF01425 Amidase A4V05_04745 PF02686 Glu-tRNAGln amidotransferase C subunit A4V05_04785 PF13180 PDZ domain A4V05_04790 PF13180 PDZ domain A4V05_04800 PF01757 Acyltransferase family A4V05_04830 PF00155 Aminotransferase class I and II A4V05_04840 PF00248 Aldo/keto reductase family A4V05_04845 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A4V05_04850 PF00248 Aldo/keto reductase family A4V05_04855 PF00149 Calcineurin-like phosphoesterase A4V05_04875 PF02525 Flavodoxin-like fold A4V05_04880 PF13411 MerR HTH family regulatory protein A4V05_04890 PF09154 Domain of unknown function (DUF1939) A4V05_04890 PF00128 Alpha amylase, catalytic domain A4V05_04900 PF01554 MatE A4V05_04910 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_04910 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_04920 PF04321 RmlD substrate binding domain A4V05_04925 PF17785 PUA-like domain A4V05_04925 PF10672 S-adenosylmethionine-dependent methyltransferase A4V05_04945 PF10672 S-adenosylmethionine-dependent methyltransferase A4V05_04945 PF17785 PUA-like domain A4V05_04950 PF02585 GlcNAc-PI de-N-acetylase A4V05_04950 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A4V05_04965 PF01728 FtsJ-like methyltransferase A4V05_04965 PF01479 S4 domain A4V05_04975 PF02678 Pirin A4V05_04975 PF17954 Quercetinase C-terminal cupin domain A4V05_04995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A4V05_04995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A4V05_05005 PF07882 L-fucose isomerase, second N-terminal domain A4V05_05005 PF07881 L-fucose isomerase, first N-terminal domain A4V05_05005 PF02952 L-fucose isomerase, C-terminal domain A4V05_05010 PF07690 Major Facilitator Superfamily A4V05_05020 PF13859 BNR repeat-like domain A4V05_05020 PF14873 N-terminal domain of BNR-repeat neuraminidase A4V05_05025 PF04542 Sigma-70 region 2 A4V05_05025 PF08281 Sigma-70, region 4 A4V05_05035 PF02583 Metal-sensitive transcriptional repressor A4V05_05040 PF00403 Heavy-metal-associated domain A4V05_05045 PF01964 Radical SAM ThiC family A4V05_05045 PF13667 ThiC-associated domain A4V05_05070 PF17820 PDZ domain A4V05_05070 PF13180 PDZ domain A4V05_05080 PF01966 HD domain A4V05_05080 PF13286 Phosphohydrolase-associated domain A4V05_05085 PF07732 Multicopper oxidase A4V05_05085 PF07731 Multicopper oxidase A4V05_05085 PF00394 Multicopper oxidase A4V05_05090 PF00892 EamA-like transporter family A4V05_05110 PF01168 Alanine racemase, N-terminal domain A4V05_05110 PF00842 Alanine racemase, C-terminal domain A4V05_05115 PF00005 ABC transporter A4V05_05115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4V05_05120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4V05_05120 PF00005 ABC transporter A4V05_05125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4V05_05130 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_05130 PF12911 N-terminal TM domain of oligopeptide transport permease C A4V05_05135 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_05150 PF02558 Ketopantoate reductase PanE/ApbA A4V05_05150 PF08546 Ketopantoate reductase PanE/ApbA C terminal A4V05_05155 PF01268 Formate--tetrahydrofolate ligase A4V05_05160 PF06940 Domain of unknown function (DUF1287) A4V05_05165 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A4V05_05165 PF02843 Phosphoribosylglycinamide synthetase, C domain A4V05_05165 PF02844 Phosphoribosylglycinamide synthetase, N domain A4V05_05170 PF00436 Single-strand binding protein family A4V05_05180 PF01618 MotA/TolQ/ExbB proton channel family A4V05_05190 PF01327 Polypeptide deformylase A4V05_05200 PF13439 Glycosyltransferase Family 4 A4V05_05200 PF00534 Glycosyl transferases group 1 A4V05_05205 PF13802 Galactose mutarotase-like A4V05_05205 PF01055 Glycosyl hydrolases family 31 A4V05_05205 PF16338 Domain of unknown function (DUF4968) A4V05_05205 PF17137 Domain of unknown function (DUF5110) A4V05_05230 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP A4V05_05230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4V05_05240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A4V05_05250 PF01757 Acyltransferase family A4V05_05255 PF00180 Isocitrate/isopropylmalate dehydrogenase A4V05_05275 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A4V05_05275 PF00753 Metallo-beta-lactamase superfamily A4V05_05275 PF10996 Beta-Casp domain A4V05_05280 PF02223 Thymidylate kinase A4V05_05285 PF06508 Queuosine biosynthesis protein QueC A4V05_05290 PF14489 QueF-like protein A4V05_05295 PF00924 Mechanosensitive ion channel A4V05_05300 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4V05_05305 PF00902 Sec-independent protein translocase protein (TatC) A4V05_05310 PF02673 Bacitracin resistance protein BacA A4V05_05330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A4V05_05340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A4V05_05345 PF00216 Bacterial DNA-binding protein A4V05_05350 PF01264 Chorismate synthase A4V05_05360 PF00175 Oxidoreductase NAD-binding domain A4V05_05360 PF00258 Flavodoxin A4V05_05360 PF00667 FAD binding domain A4V05_05370 PF00149 Calcineurin-like phosphoesterase A4V05_05390 PF02086 D12 class N6 adenine-specific DNA methyltransferase A4V05_05395 PF00589 Phage integrase family A4V05_05395 PF02899 Phage integrase, N-terminal SAM-like domain A4V05_05415 PF00465 Iron-containing alcohol dehydrogenase A4V05_05420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A4V05_05435 PF07977 FabA-like domain A4V05_05435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A4V05_05440 PF00483 Nucleotidyl transferase A4V05_05450 PF00795 Carbon-nitrogen hydrolase A4V05_05465 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_05465 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_05465 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain A4V05_05465 PF03173 Putative carbohydrate binding domain A4V05_05480 PF01578 Cytochrome C assembly protein A4V05_05490 PF01497 Periplasmic binding protein A4V05_05495 PF00005 ABC transporter A4V05_05500 PF01032 FecCD transport family A4V05_05505 PF01032 FecCD transport family A4V05_05550 PF01612 3'-5' exonuclease A4V05_05550 PF00476 DNA polymerase family A A4V05_05550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A4V05_05550 PF01367 5'-3' exonuclease, C-terminal SAM fold A4V05_05565 PF10397 Adenylosuccinate lyase C-terminus A4V05_05565 PF00206 Lyase A4V05_05575 PF07687 Peptidase dimerisation domain A4V05_05575 PF01546 Peptidase family M20/M25/M40 A4V05_05595 PF00701 Dihydrodipicolinate synthetase family A4V05_05610 PF00425 chorismate binding enzyme A4V05_05615 PF00117 Glutamine amidotransferase class-I A4V05_05620 PF07992 Pyridine nucleotide-disulphide oxidoreductase A4V05_05620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A4V05_05635 PF00117 Glutamine amidotransferase class-I A4V05_05635 PF00958 GMP synthase C terminal domain A4V05_05635 PF02540 NAD synthase A4V05_05640 PF04073 Aminoacyl-tRNA editing domain A4V05_05675 PF02310 B12 binding domain A4V05_05675 PF02607 B12 binding domain A4V05_05675 PF02965 Vitamin B12 dependent methionine synthase, activation domain A4V05_05675 PF00809 Pterin binding enzyme A4V05_05675 PF02574 Homocysteine S-methyltransferase A4V05_05680 PF06738 Putative threonine/serine exporter A4V05_05685 PF06738 Putative threonine/serine exporter A4V05_05685 PF12821 Threonine/Serine exporter, ThrE A4V05_05695 PF01842 ACT domain A4V05_05695 PF00742 Homoserine dehydrogenase A4V05_05695 PF03447 Homoserine dehydrogenase, NAD binding domain A4V05_05700 PF13840 ACT domain A4V05_05700 PF00696 Amino acid kinase family A4V05_05700 PF01842 ACT domain A4V05_05710 PF09529 Integral membrane protein (intg_mem_TP0381) A4V05_05725 PF02867 Ribonucleotide reductase, barrel domain A4V05_05725 PF08471 Class II vitamin B12-dependent ribonucleotide reductase A4V05_05735 PF08501 Shikimate dehydrogenase substrate binding domain A4V05_05735 PF01488 Shikimate / quinate 5-dehydrogenase A4V05_05735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A4V05_05740 PF14815 NUDIX domain A4V05_05740 PF00730 HhH-GPD superfamily base excision DNA repair protein A4V05_05745 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A4V05_05750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A4V05_05750 PF02896 PEP-utilising enzyme, TIM barrel domain A4V05_05750 PF00391 PEP-utilising enzyme, mobile domain A4V05_05760 PF00342 Phosphoglucose isomerase A4V05_05770 PF10672 S-adenosylmethionine-dependent methyltransferase A4V05_05770 PF17785 PUA-like domain A4V05_05780 PF01642 Methylmalonyl-CoA mutase A4V05_05780 PF02310 B12 binding domain A4V05_05785 PF01642 Methylmalonyl-CoA mutase A4V05_05815 PF14748 Pyrroline-5-carboxylate reductase dimerisation A4V05_05815 PF03807 NADP oxidoreductase coenzyme F420-dependent A4V05_05820 PF03352 Methyladenine glycosylase A4V05_05840 PF01212 Beta-eliminating lyase A4V05_05855 PF03147 Ferredoxin-fold anticodon binding domain A4V05_05855 PF01588 Putative tRNA binding domain A4V05_05855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A4V05_05855 PF03483 B3/4 domain A4V05_05855 PF03484 tRNA synthetase B5 domain A4V05_05860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A4V05_05860 PF01409 tRNA synthetases class II core domain (F) A4V05_05875 PF00183 Hsp90 protein A4V05_05875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_05880 PF07885 Ion channel A4V05_05885 PF01168 Alanine racemase, N-terminal domain A4V05_05885 PF00842 Alanine racemase, C-terminal domain A4V05_05890 PF02082 Transcriptional regulator A4V05_05895 PF01053 Cys/Met metabolism PLP-dependent enzyme A4V05_05900 PF00291 Pyridoxal-phosphate dependent enzyme A4V05_05905 PF02581 Thiamine monophosphate synthase A4V05_05910 PF02110 Hydroxyethylthiazole kinase family A4V05_05925 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_05925 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_05930 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_05930 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_05940 PF00293 NUDIX domain A4V05_05955 PF02075 Crossover junction endodeoxyribonuclease RuvC A4V05_05960 PF00271 Helicase conserved C-terminal domain A4V05_05960 PF00270 DEAD/DEAH box helicase A4V05_05965 PF00753 Metallo-beta-lactamase superfamily A4V05_05970 PF04909 Amidohydrolase A4V05_05985 PF13533 Biotin-lipoyl like A4V05_05990 PF00873 AcrB/AcrD/AcrF family A4V05_05995 PF00186 Dihydrofolate reductase A4V05_06000 PF00303 Thymidylate synthase A4V05_06005 PF13091 PLD-like domain A4V05_06005 PF13396 Phospholipase_D-nuclease N-terminal A4V05_06010 PF02436 Conserved carboxylase domain A4V05_06010 PF00682 HMGL-like A4V05_06010 PF00364 Biotin-requiring enzyme A4V05_06020 PF01554 MatE A4V05_06025 PF10609 NUBPL iron-transfer P-loop NTPase A4V05_06025 PF01883 Iron-sulfur cluster assembly protein A4V05_06040 PF08502 LeuA allosteric (dimerisation) domain A4V05_06040 PF00682 HMGL-like A4V05_06045 PF01432 Peptidase family M3 A4V05_06050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4V05_06055 PF00873 AcrB/AcrD/AcrF family A4V05_06060 PF02321 Outer membrane efflux protein A4V05_06095 PF00654 Voltage gated chloride channel A4V05_06110 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A4V05_06110 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4V05_06115 PF02684 Lipid-A-disaccharide synthetase A4V05_06120 PF09335 SNARE associated Golgi protein A4V05_06190 PF09827 CRISPR associated protein Cas2 A4V05_06195 PF01867 CRISPR associated protein Cas1 A4V05_06230 PF00171 Aldehyde dehydrogenase family A4V05_06250 PF06628 Catalase-related immune-responsive A4V05_06250 PF00199 Catalase A4V05_06250 PF18011 C-terminal domain found in long catalases A4V05_06270 PF01578 Cytochrome C assembly protein A4V05_06275 PF02915 Rubrerythrin A4V05_06280 PF13302 Acetyltransferase (GNAT) domain A4V05_06290 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A4V05_06290 PF01580 FtsK/SpoIIIE family A4V05_06290 PF09397 Ftsk gamma domain A4V05_06290 PF17854 FtsK alpha domain A4V05_06295 PF02563 Polysaccharide biosynthesis/export protein A4V05_06295 PF10531 SLBB domain A4V05_06300 PF13614 AAA domain A4V05_06310 PF02397 Bacterial sugar transferase A4V05_06315 PF00535 Glycosyl transferase family 2 A4V05_06320 PF13439 Glycosyltransferase Family 4 A4V05_06320 PF00534 Glycosyl transferases group 1 A4V05_06325 PF13439 Glycosyltransferase Family 4 A4V05_06330 PF13439 Glycosyltransferase Family 4 A4V05_06350 PF00534 Glycosyl transferases group 1 A4V05_06350 PF13439 Glycosyltransferase Family 4 A4V05_06370 PF00132 Bacterial transferase hexapeptide (six repeats) A4V05_06380 PF00535 Glycosyl transferase family 2 A4V05_06385 PF00535 Glycosyl transferase family 2 A4V05_06405 PF01757 Acyltransferase family A4V05_06420 PF01636 Phosphotransferase enzyme family A4V05_06425 PF05025 RbsD / FucU transport protein family A4V05_06430 PF00155 Aminotransferase class I and II A4V05_06440 PF01588 Putative tRNA binding domain A4V05_06440 PF08264 Anticodon-binding domain of tRNA A4V05_06440 PF09334 tRNA synthetases class I (M) A4V05_06445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4V05_06465 PF00390 Malic enzyme, N-terminal domain A4V05_06465 PF03949 Malic enzyme, NAD binding domain A4V05_06465 PF01515 Phosphate acetyl/butaryl transferase A4V05_06475 PF00722 Glycosyl hydrolases family 16 A4V05_06480 PF00933 Glycosyl hydrolase family 3 N terminal domain A4V05_06500 PF06969 HemN C-terminal domain A4V05_06500 PF04055 Radical SAM superfamily A4V05_06535 PF02403 Seryl-tRNA synthetase N-terminal domain A4V05_06535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4V05_06545 PF00107 Zinc-binding dehydrogenase A4V05_06545 PF08240 Alcohol dehydrogenase GroES-like domain A4V05_06555 PF00795 Carbon-nitrogen hydrolase A4V05_06560 PF07726 ATPase family associated with various cellular activities (AAA) A4V05_06560 PF17863 AAA lid domain A4V05_06570 PF01195 Peptidyl-tRNA hydrolase A4V05_06575 PF00912 Transglycosylase A4V05_06575 PF00905 Penicillin binding protein transpeptidase domain A4V05_06590 PF00709 Adenylosuccinate synthetase A4V05_06610 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal A4V05_06610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A4V05_06615 PF00374 Nickel-dependent hydrogenase A4V05_06625 PF01750 Hydrogenase maturation protease A4V05_06630 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA A4V05_06655 PF00881 Nitroreductase family A4V05_06660 PF00155 Aminotransferase class I and II A4V05_06680 PF02355 Protein export membrane protein A4V05_06680 PF07549 SecD/SecF GG Motif A4V05_06690 PF05681 Fumarate hydratase (Fumerase) A4V05_06690 PF05683 Fumarase C-terminus A4V05_06710 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_06710 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_06710 PF07691 PA14 domain A4V05_06715 PF02978 Signal peptide binding domain A4V05_06715 PF02881 SRP54-type protein, helical bundle domain A4V05_06715 PF00448 SRP54-type protein, GTPase domain A4V05_06755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A4V05_06760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A4V05_06775 PF00501 AMP-binding enzyme A4V05_06775 PF13193 AMP-binding enzyme C-terminal domain A4V05_06800 PF01432 Peptidase family M3 A4V05_06810 PF00750 tRNA synthetases class I (R) A4V05_06810 PF05746 DALR anticodon binding domain A4V05_06810 PF03485 Arginyl tRNA synthetase N terminal domain A4V05_06850 PF17760 UvrA interaction domain A4V05_06850 PF17755 UvrA DNA-binding domain A4V05_06850 PF00005 ABC transporter A4V05_06855 PF07516 SecA Wing and Scaffold domain A4V05_06855 PF02810 SEC-C motif A4V05_06855 PF07517 SecA DEAD-like domain A4V05_06855 PF01043 SecA preprotein cross-linking domain A4V05_06860 PF00696 Amino acid kinase family A4V05_06860 PF00583 Acetyltransferase (GNAT) family A4V05_06890 PF00574 Clp protease A4V05_07055 PF00293 NUDIX domain A4V05_07060 PF00308 Bacterial dnaA protein A4V05_07060 PF08299 Bacterial dnaA protein helix-turn-helix A4V05_07060 PF11638 DnaA N-terminal domain A4V05_07065 PF00005 ABC transporter A4V05_07085 PF01784 NIF3 (NGG1p interacting factor 3) A4V05_07090 PF00849 RNA pseudouridylate synthase A4V05_07095 PF01842 ACT domain A4V05_07095 PF00800 Prephenate dehydratase A4V05_07095 PF01817 Chorismate mutase type II A4V05_07105 PF03120 NAD-dependent DNA ligase OB-fold domain A4V05_07105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A4V05_07105 PF00533 BRCA1 C Terminus (BRCT) domain A4V05_07105 PF01653 NAD-dependent DNA ligase adenylation domain A4V05_07110 PF01066 CDP-alcohol phosphatidyltransferase A4V05_07120 PF00271 Helicase conserved C-terminal domain A4V05_07120 PF00270 DEAD/DEAH box helicase A4V05_07135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A4V05_07150 PF07690 Major Facilitator Superfamily A4V05_07155 PF04552 Sigma-54, DNA binding domain A4V05_07155 PF04963 Sigma-54 factor, core binding domain A4V05_07155 PF00309 Sigma-54 factor, Activator interacting domain (AID) A4V05_07170 PF02567 Phenazine biosynthesis-like protein A4V05_07175 PF02659 Putative manganese efflux pump A4V05_07195 PF16193 AAA C-terminal domain A4V05_07195 PF12002 MgsA AAA+ ATPase C terminal A4V05_07195 PF00004 ATPase family associated with various cellular activities (AAA) A4V05_07205 PF01370 NAD dependent epimerase/dehydratase family A4V05_07210 PF01636 Phosphotransferase enzyme family A4V05_07230 PF09180 Prolyl-tRNA synthetase, C-terminal A4V05_07230 PF03129 Anticodon binding domain A4V05_07230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A4V05_07260 PF13520 Amino acid permease A4V05_07265 PF04960 Glutaminase A4V05_07280 PF01235 Sodium:alanine symporter family A4V05_07290 PF00472 RF-1 domain A4V05_07290 PF03462 PCRF domain A4V05_07295 PF05175 Methyltransferase small domain A4V05_07295 PF17827 PrmC N-terminal domain A4V05_07300 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A4V05_07300 PF00271 Helicase conserved C-terminal domain A4V05_07300 PF04851 Type III restriction enzyme, res subunit A4V05_07300 PF17764 3′ DNA-binding domain (3′BD) A4V05_07300 PF18074 Primosomal protein N C-terminal domain A4V05_07305 PF01678 Diaminopimelate epimerase A4V05_07325 PF01209 ubiE/COQ5 methyltransferase family A4V05_07330 PF01554 MatE A4V05_07345 PF08502 LeuA allosteric (dimerisation) domain A4V05_07345 PF00682 HMGL-like A4V05_07350 PF02272 DHHA1 domain A4V05_07350 PF01368 DHH family A4V05_07350 PF17768 RecJ OB domain A4V05_07355 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_07355 PF07555 beta-N-acetylglucosaminidase A4V05_07375 PF00005 ABC transporter A4V05_07380 PF00950 ABC 3 transport family A4V05_07385 PF02151 UvrB/uvrC motif A4V05_07390 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain A4V05_07395 PF02861 Clp amino terminal domain, pathogenicity island component A4V05_07395 PF17871 AAA lid domain A4V05_07395 PF07724 AAA domain (Cdc48 subfamily) A4V05_07395 PF00004 ATPase family associated with various cellular activities (AAA) A4V05_07395 PF10431 C-terminal, D2-small domain, of ClpB protein A4V05_07410 PF01557 Fumarylacetoacetate (FAA) hydrolase family A4V05_07415 PF00682 HMGL-like A4V05_07415 PF08502 LeuA allosteric (dimerisation) domain A4V05_07430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A4V05_07430 PF02542 YgbB family A4V05_07440 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase A4V05_07445 PF00579 tRNA synthetases class I (W and Y) A4V05_07455 PF13277 YmdB-like protein A4V05_07465 PF00899 ThiF family A4V05_07480 PF00294 pfkB family carbohydrate kinase A4V05_07490 PF09297 NADH pyrophosphatase zinc ribbon domain A4V05_07490 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain A4V05_07490 PF00293 NUDIX domain A4V05_07500 PF00155 Aminotransferase class I and II A4V05_07505 PF00069 Protein kinase domain A4V05_07510 PF13614 AAA domain A4V05_07520 PF00069 Protein kinase domain A4V05_07565 PF08676 MutL C terminal dimerisation domain A4V05_07565 PF01119 DNA mismatch repair protein, C-terminal domain A4V05_07575 PF04343 Protein of unknown function, DUF488 A4V05_07585 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A4V05_07585 PF03900 Porphobilinogen deaminase, C-terminal domain A4V05_07590 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A4V05_07590 PF01488 Shikimate / quinate 5-dehydrogenase A4V05_07600 PF02649 Type I GTP cyclohydrolase folE2 A4V05_07605 PF01084 Ribosomal protein S18 A4V05_07610 PF00471 Ribosomal protein L33 A4V05_07615 PF01258 Prokaryotic dksA/traR C4-type zinc finger A4V05_07620 PF00480 ROK family A4V05_07625 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A4V05_07625 PF01189 16S rRNA methyltransferase RsmB/F A4V05_07625 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A4V05_07635 PF00293 NUDIX domain A4V05_07640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4V05_07640 PF00529 HlyD membrane-fusion protein of T1SS A4V05_07645 PF00005 ABC transporter A4V05_07645 PF02687 FtsX-like permease family A4V05_07645 PF12704 MacB-like periplasmic core domain A4V05_07650 PF02687 FtsX-like permease family A4V05_07650 PF00005 ABC transporter A4V05_07650 PF12704 MacB-like periplasmic core domain A4V05_07655 PF02321 Outer membrane efflux protein A4V05_07665 PF00873 AcrB/AcrD/AcrF family A4V05_07670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4V05_07670 PF00529 HlyD membrane-fusion protein of T1SS A4V05_07680 PF01980 tRNA-methyltransferase O A4V05_07680 PF18389 TrmO C-terminal domain A4V05_07685 PF01979 Amidohydrolase family A4V05_07690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A4V05_07690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A4V05_07695 PF00156 Phosphoribosyl transferase domain A4V05_07700 PF00731 AIR carboxylase A4V05_07720 PF04371 Porphyromonas-type peptidyl-arginine deiminase A4V05_07730 PF02163 Peptidase family M50 A4V05_07730 PF17820 PDZ domain A4V05_07735 PF01594 AI-2E family transporter A4V05_07740 PF16385 Domain of unknown function A4V05_07740 PF00884 Sulfatase A4V05_07750 PF17910 FeoB cytosolic helical domain A4V05_07750 PF02421 Ferrous iron transport protein B A4V05_07750 PF07670 Nucleoside recognition A4V05_07750 PF07664 Ferrous iron transport protein B C terminus A4V05_07750 PF04023 FeoA domain A4V05_07775 PF00521 DNA gyrase/topoisomerase IV, subunit A A4V05_07810 PF02195 ParB-like nuclease domain A4V05_07810 PF17762 HTH domain found in ParB protein A4V05_07840 PF13593 SBF-like CPA transporter family (DUF4137) A4V05_07845 PF01479 S4 domain A4V05_07845 PF00579 tRNA synthetases class I (W and Y) A4V05_07860 PF12911 N-terminal TM domain of oligopeptide transport permease C A4V05_07860 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_07865 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_07870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A4V05_07880 PF03435 Saccharopine dehydrogenase NADP binding domain A4V05_07880 PF16653 Saccharopine dehydrogenase C-terminal domain A4V05_07905 PF02491 SHS2 domain inserted in FTSA A4V05_07915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A4V05_07915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A4V05_07915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A4V05_07915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A4V05_07920 PF00664 ABC transporter transmembrane region A4V05_07920 PF00005 ABC transporter A4V05_07925 PF00664 ABC transporter transmembrane region A4V05_07925 PF00005 ABC transporter A4V05_07935 PF02405 Permease MlaE A4V05_07940 PF00005 ABC transporter A4V05_07945 PF02470 MlaD protein A4V05_07965 PF00437 Type II/IV secretion system protein A4V05_07970 PF00437 Type II/IV secretion system protein A4V05_07975 PF09312 SurA N-terminal domain A4V05_07975 PF00639 PPIC-type PPIASE domain A4V05_07990 PF02348 Cytidylyltransferase A4V05_07995 PF06418 CTP synthase N-terminus A4V05_07995 PF00117 Glutamine amidotransferase class-I A4V05_08000 PF00474 Sodium:solute symporter family A4V05_08025 PF13180 PDZ domain A4V05_08030 PF17092 Penicillin-binding protein OB-like domain A4V05_08030 PF00905 Penicillin binding protein transpeptidase domain A4V05_08030 PF00912 Transglycosylase A4V05_08035 PF02646 RmuC family A4V05_08040 PF13419 Haloacid dehalogenase-like hydrolase A4V05_08045 PF00132 Bacterial transferase hexapeptide (six repeats) A4V05_08045 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A4V05_08055 PF12704 MacB-like periplasmic core domain A4V05_08055 PF02687 FtsX-like permease family A4V05_08080 PF04389 Peptidase family M28 A4V05_08085 PF07859 alpha/beta hydrolase fold A4V05_08085 PF13472 GDSL-like Lipase/Acylhydrolase family A4V05_08090 PF08264 Anticodon-binding domain of tRNA A4V05_08090 PF00133 tRNA synthetases class I (I, L, M and V) A4V05_08095 PF01252 Signal peptidase (SPase) II A4V05_08110 PF00266 Aminotransferase class-V A4V05_08120 PF00069 Protein kinase domain A4V05_08120 PF08308 PEGA domain A4V05_08130 PF01245 Ribosomal protein L19 A4V05_08145 PF01039 Carboxyl transferase domain A4V05_08155 PF02436 Conserved carboxylase domain A4V05_08155 PF00682 HMGL-like A4V05_08155 PF00289 Biotin carboxylase, N-terminal domain A4V05_08155 PF02785 Biotin carboxylase C-terminal domain A4V05_08155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4V05_08155 PF00364 Biotin-requiring enzyme A4V05_08165 PF08279 HTH domain A4V05_08165 PF03099 Biotin/lipoate A/B protein ligase family A4V05_08165 PF02237 Biotin protein ligase C terminal domain A4V05_08170 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain A4V05_08170 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain A4V05_08180 PF00483 Nucleotidyl transferase A4V05_08185 PF16363 GDP-mannose 4,6 dehydratase A4V05_08190 PF00365 Phosphofructokinase A4V05_08200 PF02934 GatB/GatE catalytic domain A4V05_08200 PF02637 GatB domain A4V05_08205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A4V05_08205 PF00205 Thiamine pyrophosphate enzyme, central domain A4V05_08205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A4V05_08215 PF00271 Helicase conserved C-terminal domain A4V05_08230 PF12728 Helix-turn-helix domain A4V05_08230 PF00145 C-5 cytosine-specific DNA methylase A4V05_08270 PF00689 Cation transporting ATPase, C-terminus A4V05_08270 PF00690 Cation transporter/ATPase, N-terminus A4V05_08275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4V05_08275 PF00529 HlyD membrane-fusion protein of T1SS A4V05_08280 PF00873 AcrB/AcrD/AcrF family A4V05_08285 PF00939 Sodium:sulfate symporter transmembrane region A4V05_08295 PF08543 Phosphomethylpyrimidine kinase A4V05_08360 PF01327 Polypeptide deformylase A4V05_08365 PF00107 Zinc-binding dehydrogenase A4V05_08365 PF08240 Alcohol dehydrogenase GroES-like domain A4V05_08370 PF00343 Carbohydrate phosphorylase A4V05_08370 PF11897 Protein of unknown function (DUF3417) A4V05_08375 PF00520 Ion transport protein A4V05_08375 PF00027 Cyclic nucleotide-binding domain A4V05_08380 PF03960 ArsC family A4V05_08385 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A4V05_08385 PF00753 Metallo-beta-lactamase superfamily A4V05_08385 PF10996 Beta-Casp domain A4V05_08410 PF01746 tRNA (Guanine-1)-methyltransferase A4V05_08415 PF00472 RF-1 domain A4V05_08415 PF03462 PCRF domain A4V05_08425 PF00575 S1 RNA binding domain A4V05_08475 PF02548 Ketopantoate hydroxymethyltransferase A4V05_08480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A4V05_08485 PF05173 Dihydrodipicolinate reductase, C-terminus A4V05_08485 PF01113 Dihydrodipicolinate reductase, N-terminus A4V05_08490 PF00701 Dihydrodipicolinate synthetase family A4V05_08530 PF00578 AhpC/TSA family A4V05_08555 PF07883 Cupin domain A4V05_08555 PF02130 Uncharacterized protein family UPF0054 A4V05_08560 PF07698 7TM receptor with intracellular HD hydrolase A4V05_08560 PF07697 7TM-HD extracellular A4V05_08560 PF01966 HD domain A4V05_08565 PF02504 Fatty acid synthesis protein A4V05_08570 PF01783 Ribosomal L32p protein family A4V05_08580 PF01230 HIT domain A4V05_08585 PF03481 Putative GTP-binding controlling metal-binding A4V05_08585 PF01300 Telomere recombination A4V05_08590 PF01202 Shikimate kinase A4V05_08595 PF00886 Ribosomal protein S16 A4V05_08610 PF02899 Phage integrase, N-terminal SAM-like domain A4V05_08610 PF00589 Phage integrase family A4V05_08620 PF02699 Preprotein translocase subunit A4V05_08625 PF01702 Queuine tRNA-ribosyltransferase A4V05_08630 PF02390 Putative methyltransferase A4V05_08640 PF03330 Lytic transglycolase A4V05_08645 PF11858 Domain of unknown function (DUF3378) A4V05_08645 PF01351 Ribonuclease HII A4V05_08650 PF00216 Bacterial DNA-binding protein A4V05_08685 PF01618 MotA/TolQ/ExbB proton channel family A4V05_08705 PF02837 Glycosyl hydrolases family 2, sugar binding domain A4V05_08705 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A4V05_08705 PF00703 Glycosyl hydrolases family 2 A4V05_08705 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 A4V05_08705 PF16355 Domain of unknown function (DUF4982) A4V05_08710 PF08264 Anticodon-binding domain of tRNA A4V05_08710 PF00133 tRNA synthetases class I (I, L, M and V) A4V05_08710 PF10458 Valyl tRNA synthetase tRNA binding arm A4V05_08725 PF00238 Ribosomal protein L14p/L23e A4V05_08730 PF00366 Ribosomal protein S17 A4V05_08735 PF00831 Ribosomal L29 protein A4V05_08740 PF00252 Ribosomal protein L16p/L10e A4V05_08745 PF00189 Ribosomal protein S3, C-terminal domain A4V05_08745 PF07650 KH domain A4V05_08750 PF00237 Ribosomal protein L22p/L17e A4V05_08760 PF00203 Ribosomal protein S19 A4V05_08765 PF03947 Ribosomal Proteins L2, C-terminal domain A4V05_08765 PF00181 Ribosomal Proteins L2, RNA binding domain A4V05_08770 PF00276 Ribosomal protein L23 A4V05_08775 PF00573 Ribosomal protein L4/L1 family A4V05_08780 PF00297 Ribosomal protein L3 A4V05_08785 PF00338 Ribosomal protein S10p/S20e A4V05_08790 PF14492 Elongation Factor G, domain II A4V05_08790 PF03144 Elongation factor Tu domain 2 A4V05_08790 PF00009 Elongation factor Tu GTP binding domain A4V05_08790 PF03764 Elongation factor G, domain IV A4V05_08790 PF00679 Elongation factor G C-terminus A4V05_08795 PF00177 Ribosomal protein S7p/S5e A4V05_08800 PF00164 Ribosomal protein S12/S23 A4V05_08805 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A4V05_08805 PF01676 Metalloenzyme superfamily A4V05_08815 PF00989 PAS fold A4V05_08815 PF00512 His Kinase A (phospho-acceptor) domain A4V05_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_08820 PF00158 Sigma-54 interaction domain A4V05_08820 PF00072 Response regulator receiver domain A4V05_08820 PF02954 Bacterial regulatory protein, Fis family A4V05_08830 PF02609 Exonuclease VII small subunit A4V05_08835 PF02780 Transketolase, C-terminal domain A4V05_08835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A4V05_08835 PF02779 Transketolase, pyrimidine binding domain A4V05_08850 PF03739 Lipopolysaccharide export system permease LptF/LptG A4V05_08855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A4V05_08855 PF01926 50S ribosome-binding GTPase A4V05_08860 PF00005 ABC transporter A4V05_08860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4V05_08880 PF12704 MacB-like periplasmic core domain A4V05_08880 PF02687 FtsX-like permease family A4V05_08880 PF00005 ABC transporter A4V05_08890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A4V05_08890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A4V05_08920 PF11412 Disulphide bond corrector protein DsbC A4V05_08920 PF02683 Cytochrome C biogenesis protein transmembrane region A4V05_08935 PF05190 MutS family domain IV A4V05_08935 PF00488 MutS domain V A4V05_08935 PF05192 MutS domain III A4V05_08935 PF05188 MutS domain II A4V05_08935 PF01624 MutS domain I A4V05_08950 PF01434 Peptidase family M41 A4V05_08950 PF17862 AAA+ lid domain A4V05_08950 PF00004 ATPase family associated with various cellular activities (AAA) A4V05_08970 PF00378 Enoyl-CoA hydratase/isomerase A4V05_09010 PF00005 ABC transporter A4V05_09025 PF12857 TOBE-like domain A4V05_09025 PF00005 ABC transporter A4V05_09035 PF00106 short chain dehydrogenase A4V05_09050 PF01590 GAF domain A4V05_09050 PF02954 Bacterial regulatory protein, Fis family A4V05_09050 PF00158 Sigma-54 interaction domain A4V05_09055 PF00654 Voltage gated chloride channel A4V05_09065 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_09065 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_09065 PF07691 PA14 domain A4V05_09080 PF00282 Pyridoxal-dependent decarboxylase conserved domain A4V05_09090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A4V05_09090 PF02811 PHP domain A4V05_09090 PF14579 Helix-hairpin-helix motif A4V05_09090 PF07733 Bacterial DNA polymerase III alpha NTPase domain A4V05_09090 PF01336 OB-fold nucleic acid binding domain A4V05_09095 PF01180 Dihydroorotate dehydrogenase A4V05_09100 PF02581 Thiamine monophosphate synthase A4V05_09120 PF00571 CBS domain A4V05_09120 PF03471 Transporter associated domain A4V05_09120 PF01595 Cyclin M transmembrane N-terminal domain A4V05_09125 PF00571 CBS domain A4V05_09125 PF03471 Transporter associated domain A4V05_09125 PF01595 Cyclin M transmembrane N-terminal domain A4V05_09135 PF00013 KH domain A4V05_09135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A4V05_09135 PF01138 3' exoribonuclease family, domain 1 A4V05_09135 PF00575 S1 RNA binding domain A4V05_09135 PF03725 3' exoribonuclease family, domain 2 A4V05_09140 PF00312 Ribosomal protein S15 A4V05_09145 PF12464 Maltose acetyltransferase A4V05_09145 PF00132 Bacterial transferase hexapeptide (six repeats) A4V05_09170 PF01416 tRNA pseudouridine synthase A4V05_09175 PF01467 Cytidylyltransferase-like A4V05_09195 PF14245 Type IV pilin PilA A4V05_09195 PF07963 Prokaryotic N-terminal methylation motif A4V05_09200 PF03725 3' exoribonuclease family, domain 2 A4V05_09200 PF01138 3' exoribonuclease family, domain 1 A4V05_09210 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_09210 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_09210 PF07691 PA14 domain A4V05_09220 PF02457 DisA bacterial checkpoint controller nucleotide-binding A4V05_09235 PF00005 ABC transporter A4V05_09240 PF02569 Pantoate-beta-alanine ligase A4V05_09250 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A4V05_09250 PF00132 Bacterial transferase hexapeptide (six repeats) A4V05_09255 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_09260 PF00005 ABC transporter A4V05_09275 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_09275 PF07555 beta-N-acetylglucosaminidase A4V05_09285 PF13580 SIS domain A4V05_09290 PF00294 pfkB family carbohydrate kinase A4V05_09290 PF01467 Cytidylyltransferase-like A4V05_09300 PF01165 Ribosomal protein S21 A4V05_09305 PF00202 Aminotransferase class-III A4V05_09320 PF00083 Sugar (and other) transporter A4V05_09335 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A4V05_09335 PF00749 tRNA synthetases class I (E and Q), catalytic domain A4V05_09340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A4V05_09340 PF00925 GTP cyclohydrolase II A4V05_09345 PF00885 6,7-dimethyl-8-ribityllumazine synthase A4V05_09350 PF01029 NusB family A4V05_09355 PF02881 SRP54-type protein, helical bundle domain A4V05_09355 PF00448 SRP54-type protein, GTPase domain A4V05_09360 PF04055 Radical SAM superfamily A4V05_09365 PF03796 DnaB-like helicase C terminal domain A4V05_09365 PF00772 DnaB-like helicase N terminal domain A4V05_09375 PF04191 Phospholipid methyltransferase A4V05_09380 PF00994 Probable molybdopterin binding domain A4V05_09380 PF18146 Damage-inducible protein CinA KH domain A4V05_09380 PF02464 Competence-damaged protein A4V05_09385 PF02887 Pyruvate kinase, alpha/beta domain A4V05_09385 PF00391 PEP-utilising enzyme, mobile domain A4V05_09385 PF00224 Pyruvate kinase, barrel domain A4V05_09390 PF00583 Acetyltransferase (GNAT) family A4V05_09415 PF00163 Ribosomal protein S4/S9 N-terminal domain A4V05_09415 PF01479 S4 domain A4V05_09420 PF00411 Ribosomal protein S11 A4V05_09425 PF00416 Ribosomal protein S13/S18 A4V05_09430 PF08331 Domain of unknown function (DUF1730) A4V05_09445 PF17782 DprA winged helix domain A4V05_09445 PF02481 DNA recombination-mediator protein A A4V05_09450 PF07943 Penicillin-binding protein 5, C-terminal domain A4V05_09450 PF00768 D-alanyl-D-alanine carboxypeptidase A4V05_09455 PF01926 50S ribosome-binding GTPase A4V05_09455 PF06071 Protein of unknown function (DUF933) A4V05_09465 PF01597 Glycine cleavage H-protein A4V05_09470 PF02347 Glycine cleavage system P-protein A4V05_09485 PF16385 Domain of unknown function A4V05_09485 PF00884 Sulfatase A4V05_09490 PF00270 DEAD/DEAH box helicase A4V05_09490 PF00271 Helicase conserved C-terminal domain A4V05_09490 PF03880 DbpA RNA binding domain A4V05_09510 PF07681 DoxX A4V05_09515 PF02769 AIR synthase related protein, C-terminal domain A4V05_09515 PF00586 AIR synthase related protein, N-terminal domain A4V05_09520 PF00156 Phosphoribosyl transferase domain A4V05_09525 PF08281 Sigma-70, region 4 A4V05_09525 PF04542 Sigma-70 region 2 A4V05_09545 PF02441 Flavoprotein A4V05_09570 PF08220 DeoR-like helix-turn-helix domain A4V05_09570 PF00455 DeoR C terminal sensor domain A4V05_09580 PF00266 Aminotransferase class-V A4V05_09585 PF02441 Flavoprotein A4V05_09585 PF04127 DNA / pantothenate metabolism flavoprotein A4V05_09590 PF03193 RsgA GTPase A4V05_09620 PF03976 Polyphosphate kinase 2 (PPK2) A4V05_09635 PF08305 NPCBM/NEW2 domain A4V05_09645 PF12146 Serine aminopeptidase, S33 A4V05_09650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A4V05_09660 PF01016 Ribosomal L27 protein A4V05_09665 PF01475 Ferric uptake regulator family A4V05_09670 PF00005 ABC transporter A4V05_09675 PF01458 Uncharacterized protein family (UPF0051) A4V05_09680 PF01458 Uncharacterized protein family (UPF0051) A4V05_09690 PF00884 Sulfatase A4V05_09695 PF06968 Biotin and Thiamin Synthesis associated domain A4V05_09695 PF04055 Radical SAM superfamily A4V05_09700 PF00202 Aminotransferase class-III A4V05_09725 PF00535 Glycosyl transferase family 2 A4V05_09735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A4V05_09755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A4V05_09755 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A4V05_09760 PF02874 ATP synthase alpha/beta family, beta-barrel domain A4V05_09760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4V05_09765 PF00231 ATP synthase A4V05_09770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4V05_09770 PF02874 ATP synthase alpha/beta family, beta-barrel domain A4V05_09770 PF00306 ATP synthase alpha/beta chain, C terminal domain A4V05_09775 PF00213 ATP synthase delta (OSCP) subunit A4V05_09780 PF00430 ATP synthase B/B' CF(0) A4V05_09785 PF00137 ATP synthase subunit C A4V05_09790 PF00119 ATP synthase A chain A4V05_09800 PF03717 Penicillin-binding Protein dimerisation domain A4V05_09800 PF00905 Penicillin binding protein transpeptidase domain A4V05_09830 PF03928 Haem-degrading A4V05_09860 PF00899 ThiF family A4V05_09865 PF01380 SIS domain A4V05_09865 PF00571 CBS domain A4V05_09885 PF00132 Bacterial transferase hexapeptide (six repeats) A4V05_09885 PF06426 Serine acetyltransferase, N-terminal A4V05_09890 PF00171 Aldehyde dehydrogenase family A4V05_09895 PF01472 PUA domain A4V05_09895 PF00696 Amino acid kinase family A4V05_09905 PF02780 Transketolase, C-terminal domain A4V05_09905 PF00456 Transketolase, thiamine diphosphate binding domain A4V05_09905 PF02779 Transketolase, pyrimidine binding domain A4V05_09910 PF03449 Transcription elongation factor, N-terminal A4V05_09910 PF01272 Transcription elongation factor, GreA/GreB, C-term A4V05_09915 PF01259 SAICAR synthetase A4V05_09925 PF00586 AIR synthase related protein, N-terminal domain A4V05_09925 PF02769 AIR synthase related protein, C-terminal domain A4V05_09925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A4V05_09940 PF05343 M42 glutamyl aminopeptidase A4V05_09955 PF02837 Glycosyl hydrolases family 2, sugar binding domain A4V05_09955 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 A4V05_09955 PF00703 Glycosyl hydrolases family 2 A4V05_09955 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A4V05_09965 PF10150 Ribonuclease E/G family A4V05_09965 PF00575 S1 RNA binding domain A4V05_09995 PF02472 Biopolymer transport protein ExbD/TolR A4V05_10010 PF00730 HhH-GPD superfamily base excision DNA repair protein A4V05_10030 PF00218 Indole-3-glycerol phosphate synthase A4V05_10035 PF02021 Uncharacterised protein family UPF0102 A4V05_10040 PF01351 Ribonuclease HII A4V05_10045 PF03471 Transporter associated domain A4V05_10045 PF00571 CBS domain A4V05_10045 PF01595 Cyclin M transmembrane N-terminal domain A4V05_10055 PF00253 Ribosomal protein S14p/S29e A4V05_10070 PF00764 Arginosuccinate synthase A4V05_10075 PF00884 Sulfatase A4V05_10080 PF01029 NusB family A4V05_10080 PF01189 16S rRNA methyltransferase RsmB/F A4V05_10085 PF00121 Triosephosphate isomerase A4V05_10100 PF00884 Sulfatase A4V05_10130 PF03819 MazG nucleotide pyrophosphohydrolase domain A4V05_10140 PF00570 HRDC domain A4V05_10140 PF01612 3'-5' exonuclease A4V05_10155 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A4V05_10165 PF05193 Peptidase M16 inactive domain A4V05_10165 PF00675 Insulinase (Peptidase family M16) A4V05_10185 PF02677 Epoxyqueuosine reductase QueH A4V05_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4V05_10190 PF03466 LysR substrate binding domain A4V05_10195 PF02219 Methylenetetrahydrofolate reductase A4V05_10200 PF08267 Cobalamin-independent synthase, N-terminal domain A4V05_10200 PF01717 Cobalamin-independent synthase, Catalytic domain A4V05_10210 PF01118 Semialdehyde dehydrogenase, NAD binding domain A4V05_10210 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain A4V05_10215 PF03734 L,D-transpeptidase catalytic domain A4V05_10235 PF00585 C-terminal regulatory domain of Threonine dehydratase A4V05_10235 PF00291 Pyridoxal-phosphate dependent enzyme A4V05_10240 PF02545 Maf-like protein A4V05_10245 PF13167 GTP-binding GTPase N-terminal A4V05_10245 PF01926 50S ribosome-binding GTPase A4V05_10245 PF16360 GTP-binding GTPase Middle Region A4V05_10250 PF00069 Protein kinase domain A4V05_10250 PF03793 PASTA domain A4V05_10265 PF00586 AIR synthase related protein, N-terminal domain A4V05_10265 PF02769 AIR synthase related protein, C-terminal domain A4V05_10275 PF02224 Cytidylate kinase A4V05_10285 PF02463 RecF/RecN/SMC N terminal domain A4V05_10295 PF14622 Ribonuclease-III-like A4V05_10295 PF00035 Double-stranded RNA binding motif A4V05_10305 PF02899 Phage integrase, N-terminal SAM-like domain A4V05_10305 PF00589 Phage integrase family A4V05_10335 PF03372 Endonuclease/Exonuclease/phosphatase family A4V05_10340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A4V05_10355 PF01502 Phosphoribosyl-AMP cyclohydrolase A4V05_10360 PF09115 DNA polymerase III, delta subunit, C terminal A4V05_10375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A4V05_10375 PF02142 MGS-like domain A4V05_10375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4V05_10390 PF08241 Methyltransferase domain A4V05_10395 PF02540 NAD synthase A4V05_10395 PF00795 Carbon-nitrogen hydrolase A4V05_10400 PF00893 Small Multidrug Resistance protein A4V05_10410 PF13859 BNR repeat-like domain A4V05_10435 PF00069 Protein kinase domain A4V05_10435 PF03793 PASTA domain A4V05_10450 PF05656 Protein of unknown function (DUF805) A4V05_10480 PF05491 RuvB C-terminal winged helix domain A4V05_10480 PF17864 RuvB AAA lid domain A4V05_10480 PF05496 Holliday junction DNA helicase RuvB P-loop domain A4V05_10485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A4V05_10485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A4V05_10490 PF00258 Flavodoxin A4V05_10490 PF00667 FAD binding domain A4V05_10490 PF00175 Oxidoreductase NAD-binding domain A4V05_10495 PF00535 Glycosyl transferase family 2 A4V05_10500 PF00535 Glycosyl transferase family 2 A4V05_10525 PF00534 Glycosyl transferases group 1 A4V05_10535 PF01757 Acyltransferase family A4V05_10555 PF01926 50S ribosome-binding GTPase A4V05_10555 PF10396 GTP-binding protein TrmE N-terminus A4V05_10555 PF12631 MnmE helical domain A4V05_10565 PF03458 UPF0126 domain A4V05_10570 PF10996 Beta-Casp domain A4V05_10570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A4V05_10570 PF00753 Metallo-beta-lactamase superfamily A4V05_10575 PF02381 MraZ protein, putative antitoxin-like A4V05_10580 PF01795 MraW methylase family A4V05_10590 PF03717 Penicillin-binding Protein dimerisation domain A4V05_10590 PF00905 Penicillin binding protein transpeptidase domain A4V05_10590 PF03793 PASTA domain A4V05_10595 PF02875 Mur ligase family, glutamate ligase domain A4V05_10595 PF01225 Mur ligase family, catalytic domain A4V05_10595 PF08245 Mur ligase middle domain A4V05_10600 PF01225 Mur ligase family, catalytic domain A4V05_10600 PF08245 Mur ligase middle domain A4V05_10600 PF02875 Mur ligase family, glutamate ligase domain A4V05_10605 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A4V05_10605 PF00953 Glycosyl transferase family 4 A4V05_10610 PF02875 Mur ligase family, glutamate ligase domain A4V05_10610 PF08245 Mur ligase middle domain A4V05_10620 PF01098 Cell cycle protein A4V05_10625 PF04101 Glycosyltransferase family 28 C-terminal domain A4V05_10625 PF03033 Glycosyltransferase family 28 N-terminal domain A4V05_10630 PF01225 Mur ligase family, catalytic domain A4V05_10630 PF08245 Mur ligase middle domain A4V05_10630 PF02875 Mur ligase family, glutamate ligase domain A4V05_10635 PF01820 D-ala D-ala ligase N-terminus A4V05_10635 PF07478 D-ala D-ala ligase C-terminus A4V05_10645 PF00154 recA bacterial DNA recombination protein A4V05_10650 PF01520 N-acetylmuramoyl-L-alanine amidase A4V05_10655 PF03099 Biotin/lipoate A/B protein ligase family A4V05_10660 PF00330 Aconitase family (aconitate hydratase) A4V05_10665 PF00694 Aconitase C-terminal domain A4V05_10675 PF13180 PDZ domain A4V05_10675 PF17820 PDZ domain A4V05_10685 PF01761 3-dehydroquinate synthase A4V05_10695 PF00005 ABC transporter A4V05_10695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A4V05_10705 PF00889 Elongation factor TS A4V05_10720 PF00793 DAHP synthetase I family A4V05_10735 PF12399 Branched-chain amino acid ATP-binding cassette transporter A4V05_10735 PF00005 ABC transporter A4V05_10745 PF01225 Mur ligase family, catalytic domain A4V05_10745 PF08245 Mur ligase middle domain A4V05_10745 PF02875 Mur ligase family, glutamate ligase domain A4V05_10750 PF00691 OmpA family A4V05_10755 PF00580 UvrD/REP helicase N-terminal domain A4V05_10755 PF13361 UvrD-like helicase C-terminal domain A4V05_10760 PF01638 HxlR-like helix-turn-helix A4V05_10770 PF00005 ABC transporter A4V05_10770 PF17760 UvrA interaction domain A4V05_10770 PF17755 UvrA DNA-binding domain A4V05_10785 PF01336 OB-fold nucleic acid binding domain A4V05_10785 PF00152 tRNA synthetases class II (D, K and N) A4V05_10795 PF00085 Thioredoxin A4V05_10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A4V05_10845 PF03466 LysR substrate binding domain A4V05_10850 PF03601 Conserved hypothetical protein 698 A4V05_10855 PF00266 Aminotransferase class-V A4V05_10870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4V05_10870 PF01842 ACT domain A4V05_10870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4V05_10880 PF04055 Radical SAM superfamily A4V05_10885 PF07497 Rho termination factor, RNA-binding domain A4V05_10885 PF07498 Rho termination factor, N-terminal domain A4V05_10885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A4V05_10890 PF01709 Transcriptional regulator A4V05_10895 PF16916 Dimerisation domain of Zinc Transporter A4V05_10895 PF01545 Cation efflux family A4V05_10900 PF02254 TrkA-N domain A4V05_10900 PF00999 Sodium/hydrogen exchanger family A4V05_10910 PF02547 Queuosine biosynthesis protein A4V05_10915 PF12127 SigmaW regulon antibacterial A4V05_10925 PF05690 Thiazole biosynthesis protein ThiG A4V05_10930 PF13520 Amino acid permease A4V05_10940 PF01594 AI-2E family transporter A4V05_10945 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A4V05_10945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A4V05_10950 PF01116 Fructose-bisphosphate aldolase class-II A4V05_10960 PF01063 Amino-transferase class IV A4V05_10965 PF00722 Glycosyl hydrolases family 16 A4V05_10970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A4V05_10970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A4V05_10985 PF01926 50S ribosome-binding GTPase A4V05_10985 PF01018 GTP1/OBG A4V05_10990 PF01636 Phosphotransferase enzyme family A4V05_11040 PF01451 Low molecular weight phosphotyrosine protein phosphatase A4V05_11045 PF00571 CBS domain A4V05_11045 PF00478 IMP dehydrogenase / GMP reductase domain A4V05_11050 PF02540 NAD synthase A4V05_11050 PF00958 GMP synthase C terminal domain A4V05_11050 PF00117 Glutamine amidotransferase class-I A4V05_11055 PF12464 Maltose acetyltransferase A4V05_11055 PF14602 Hexapeptide repeat of succinyl-transferase A4V05_11060 PF13419 Haloacid dehalogenase-like hydrolase A4V05_11075 PF00793 DAHP synthetase I family A4V05_11080 PF07963 Prokaryotic N-terminal methylation motif A4V05_11080 PF00114 Pilin (bacterial filament) A4V05_11090 PF02261 Aspartate decarboxylase A4V05_11095 PF01687 Riboflavin kinase A4V05_11095 PF06574 FAD synthetase A4V05_11100 PF16198 tRNA pseudouridylate synthase B C-terminal domain A4V05_11100 PF01509 TruB family pseudouridylate synthase (N terminal domain) A4V05_11115 PF00149 Calcineurin-like phosphoesterase A4V05_11120 PF08759 Glycosyltransferase GT-D fold A4V05_11120 PF01501 Glycosyl transferase family 8 A4V05_11125 PF01501 Glycosyl transferase family 8 A4V05_11125 PF00535 Glycosyl transferase family 2 A4V05_11135 PF01370 NAD dependent epimerase/dehydratase family A4V05_11140 PF00535 Glycosyl transferase family 2 A4V05_11165 PF01757 Acyltransferase family A4V05_11180 PF03600 Citrate transporter A4V05_11180 PF02080 TrkA-C domain A4V05_11215 PF01301 Glycosyl hydrolases family 35 A4V05_11225 PF00300 Histidine phosphatase superfamily (branch 1) A4V05_11230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A4V05_11230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A4V05_11235 PF01757 Acyltransferase family A4V05_11240 PF07690 Major Facilitator Superfamily A4V05_11245 PF03061 Thioesterase superfamily A4V05_11265 PF00565 Staphylococcal nuclease homologue A4V05_11280 PF02195 ParB-like nuclease domain A4V05_11285 PF11922 Domain of unknown function (DUF3440) A4V05_11285 PF01507 Phosphoadenosine phosphosulfate reductase family A4V05_11430 PF03796 DnaB-like helicase C terminal domain A4V05_11430 PF00772 DnaB-like helicase N terminal domain A4V05_11445 PF12728 Helix-turn-helix domain A4V05_11445 PF00145 C-5 cytosine-specific DNA methylase A4V05_11495 PF01555 DNA methylase A4V05_11515 PF00180 Isocitrate/isopropylmalate dehydrogenase A4V05_11530 PF01078 Magnesium chelatase, subunit ChlI A4V05_11530 PF13335 Magnesium chelatase, subunit ChlI C-terminal A4V05_11540 PF01053 Cys/Met metabolism PLP-dependent enzyme A4V05_11550 PF13186 Iron-sulfur cluster-binding domain A4V05_11550 PF04055 Radical SAM superfamily A4V05_11565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A4V05_11565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A4V05_11570 PF02660 Glycerol-3-phosphate acyltransferase A4V05_11580 PF00152 tRNA synthetases class II (D, K and N) A4V05_11580 PF01336 OB-fold nucleic acid binding domain A4V05_11600 PF01638 HxlR-like helix-turn-helix A4V05_11610 PF00977 Histidine biosynthesis protein A4V05_11620 PF02386 Cation transport protein A4V05_11630 PF11898 Domain of unknown function (DUF3418) A4V05_11630 PF00271 Helicase conserved C-terminal domain A4V05_11630 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A4V05_11630 PF04408 Helicase associated domain (HA2) A4V05_11630 PF00270 DEAD/DEAH box helicase A4V05_11635 PF10369 Small subunit of acetolactate synthase A4V05_11640 PF00595 PDZ domain A4V05_11640 PF13180 PDZ domain A4V05_11655 PF13932 GidA associated domain A4V05_11655 PF01134 Glucose inhibited division protein A A4V05_11665 PF01872 RibD C-terminal domain A4V05_11665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A4V05_11670 PF00132 Bacterial transferase hexapeptide (six repeats) A4V05_11670 PF00483 Nucleotidyl transferase A4V05_11680 PF00712 DNA polymerase III beta subunit, N-terminal domain A4V05_11680 PF02768 DNA polymerase III beta subunit, C-terminal domain A4V05_11680 PF02767 DNA polymerase III beta subunit, central domain A4V05_11705 PF00877 NlpC/P60 family A4V05_11705 PF01476 LysM domain A4V05_11710 PF01026 TatD related DNase A4V05_11720 PF16353 Domain of unknown function(DUF4981) A4V05_11720 PF00703 Glycosyl hydrolases family 2 A4V05_11720 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A4V05_11720 PF02837 Glycosyl hydrolases family 2, sugar binding domain A4V05_11720 PF02929 Beta galactosidase small chain A4V05_11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_11740 PF13493 Domain of unknown function (DUF4118) A4V05_11740 PF02702 Osmosensitive K+ channel His kinase sensor domain A4V05_11740 PF00512 His Kinase A (phospho-acceptor) domain A4V05_11740 PF13492 GAF domain A4V05_11745 PF00072 Response regulator receiver domain A4V05_11745 PF00486 Transcriptional regulatory protein, C terminal A4V05_11755 PF03814 Potassium-transporting ATPase A subunit A4V05_11765 PF02669 K+-transporting ATPase, c chain A4V05_11785 PF10431 C-terminal, D2-small domain, of ClpB protein A4V05_11785 PF00004 ATPase family associated with various cellular activities (AAA) A4V05_11785 PF17871 AAA lid domain A4V05_11785 PF02861 Clp amino terminal domain, pathogenicity island component A4V05_11785 PF07724 AAA domain (Cdc48 subfamily) A4V05_11830 PF03477 ATP cone domain A4V05_11840 PF01740 STAS domain A4V05_11840 PF00916 Sulfate permease family A4V05_11845 PF00206 Lyase A4V05_11845 PF14698 Argininosuccinate lyase C-terminal A4V05_11860 PF03952 Enolase, N-terminal domain A4V05_11860 PF00113 Enolase, C-terminal TIM barrel domain A4V05_11865 PF01261 Xylose isomerase-like TIM barrel A4V05_11870 PF02973 Sialidase, N-terminal domain A4V05_11870 PF00754 F5/8 type C domain A4V05_11870 PF13088 BNR repeat-like domain A4V05_11875 PF01336 OB-fold nucleic acid binding domain A4V05_11875 PF01966 HD domain A4V05_11885 PF01938 TRAM domain A4V05_11885 PF00919 Uncharacterized protein family UPF0004 A4V05_11885 PF04055 Radical SAM superfamily A4V05_11890 PF01938 TRAM domain A4V05_11890 PF05958 tRNA (Uracil-5-)-methyltransferase A4V05_11910 PF00216 Bacterial DNA-binding protein A4V05_11915 PF16874 Glycosyl hydrolase family 36 C-terminal domain A4V05_11915 PF16875 Glycosyl hydrolase family 36 N-terminal domain A4V05_11920 PF06826 Predicted Permease Membrane Region A4V05_11920 PF02080 TrkA-C domain A4V05_11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A4V05_11930 PF00989 PAS fold A4V05_11930 PF00512 His Kinase A (phospho-acceptor) domain A4V05_11935 PF00939 Sodium:sulfate symporter transmembrane region A4V05_11960 PF00884 Sulfatase A4V05_11960 PF08019 Phosphoethanolamine transferase EptA/EptB A4V05_11970 PF02915 Rubrerythrin A4V05_11980 PF05343 M42 glutamyl aminopeptidase A4V05_11985 PF07691 PA14 domain A4V05_11985 PF02838 Glycosyl hydrolase family 20, domain 2 A4V05_11985 PF00728 Glycosyl hydrolase family 20, catalytic domain A4V05_11995 PF00245 Alkaline phosphatase A4V05_12000 PF01741 Large-conductance mechanosensitive channel, MscL A4V05_12005 PF00202 Aminotransferase class-III A4V05_12015 PF09285 Elongation factor P, C-terminal A4V05_12015 PF08207 Elongation factor P (EF-P) KOW-like domain A4V05_12015 PF01132 Elongation factor P (EF-P) OB domain A4V05_12020 PF00722 Glycosyl hydrolases family 16 A4V05_12025 PF00403 Heavy-metal-associated domain A4V05_12030 PF02463 RecF/RecN/SMC N terminal domain A4V05_12035 PF03099 Biotin/lipoate A/B protein ligase family A4V05_12035 PF12706 Beta-lactamase superfamily domain A4V05_12040 PF03808 Glycosyl transferase WecB/TagA/CpsF family A4V05_12070 PF00364 Biotin-requiring enzyme A4V05_12070 PF02817 e3 binding domain A4V05_12070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A4V05_12075 PF02779 Transketolase, pyrimidine binding domain A4V05_12075 PF02780 Transketolase, C-terminal domain A4V05_12080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A4V05_12080 PF02780 Transketolase, C-terminal domain A4V05_12080 PF02779 Transketolase, pyrimidine binding domain A4V05_12090 PF13411 MerR HTH family regulatory protein A4V05_12095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A4V05_12095 PF00529 HlyD membrane-fusion protein of T1SS A4V05_12100 PF00873 AcrB/AcrD/AcrF family A4V05_12125 PF12169 DNA polymerase III subunits gamma and tau domain III A4V05_12145 PF00528 Binding-protein-dependent transport system inner membrane component A4V05_12170 PF00145 C-5 cytosine-specific DNA methylase A4V05_12205 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A4V05_12215 PF01479 S4 domain A4V05_12215 PF00849 RNA pseudouridylate synthase A4V05_12225 PF03976 Polyphosphate kinase 2 (PPK2)