locus-tag	class	description
D3M96_00005	K02313	dnaA;chromosomal replication initiator protein
D3M96_00010	K02338	dnaN;DNA polymerase III subunit beta [EC:2.7.7.7]
D3M96_00040	K06183	rsuA;16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D3M96_00060	K03863	vanB;vanillate monooxygenase ferredoxin subunit
D3M96_00070	K00053	ilvC;ketol-acid reductoisomerase [EC:1.1.1.86]
D3M96_00095	K01997	livH;branched-chain amino acid transport system permease protein
D3M96_00100	K01998	livM;branched-chain amino acid transport system permease protein
D3M96_00105	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_00110	K00666	ACSF2;fatty-acyl-CoA synthase [EC:6.2.1.-]
D3M96_00120	K00627	DLAT, aceF, pdhC;pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
D3M96_00135	K06033	E4.1.1.76;arylmalonate decarboxylase [EC:4.1.1.76]
D3M96_00165	K02010	afuC, fbpC;iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D3M96_00175	K00812	aspB;aspartate aminotransferase [EC:2.6.1.1]
D3M96_00180	K19669	pphA;phosphonopyruvate hydrolase [EC:3.11.1.3]
D3M96_00250	K01075	E3.1.2.23;4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D3M96_00255	K21684	sdgC;salicyloyl-CoA 5-hydroxylase [EC:1.14.13.209]
D3M96_00270	K01502	E3.5.5.7;aliphatic nitrilase [EC:3.5.5.7]
D3M96_00285	K05549	benA-xylX;benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D3M96_00295	K02182	caiC;carnitine-CoA ligase [EC:6.2.1.48]
D3M96_00310	K00059	fabG, OAR1;3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D3M96_00320	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_00340	K19548	bacC;dihydroanticapsin dehydrogenase [EC:1.1.1.385]
D3M96_00370	K10017	hisP;histidine transport system ATP-binding protein [EC:7.4.2.1]
D3M96_00380	K01579	panD;aspartate 1-decarboxylase [EC:4.1.1.11]
D3M96_00385	K02032	ABC.PE.A1;peptide/nickel transport system ATP-binding protein
D3M96_00390	K02031	ABC.PE.A;peptide/nickel transport system ATP-binding protein
D3M96_00395	K12370	dppC;dipeptide transport system permease protein
D3M96_00400	K02033	ABC.PE.P;peptide/nickel transport system permease protein
D3M96_00405	K12368	dppA;dipeptide transport system substrate-binding protein
D3M96_00410	K02346	dinB;DNA polymerase IV [EC:2.7.7.7]
D3M96_00415	K00821	argD;acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D3M96_00420	K09023	rutD;aminoacrylate hydrolase [EC:3.5.1.-]
D3M96_00450	K17850	ampR;LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D3M96_00460	K02018	modB;molybdate transport system permease protein
D3M96_00475	K01638	aceB, glcB;malate synthase [EC:2.3.3.9]
D3M96_00485	K01241	amn;AMP nucleosidase [EC:3.2.2.4]
D3M96_00510	K01652	E2.2.1.6L, ilvB, ilvG, ilvI;acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D3M96_00525	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_00540	K03169	topB;DNA topoisomerase III [EC:5.6.2.1]
D3M96_00550	K03747	smg;Smg protein
D3M96_00555	K01894	gluQ;glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D3M96_00570	K00626	E2.3.1.9, atoB;acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D3M96_00575	K00906	aceK;isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D3M96_00600	K03673	dsbA;thiol:disulfide interchange protein DsbA
D3M96_00610	K01887	RARS, argS;arginyl-tRNA synthetase [EC:6.1.1.19]
D3M96_00640	K01649	leuA, IMS;2-isopropylmalate synthase [EC:2.3.3.13]
D3M96_00650	K03092	rpoN;RNA polymerase sigma-54 factor
D3M96_00675	K02837	prfC;peptide chain release factor 3
D3M96_00680	K05834	rhtB;homoserine/homoserine lactone efflux protein
D3M96_00685	K11927	rhlE;ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
D3M96_00695	K06872	K06872;uncharacterized protein
D3M96_00710	K03650	mnmE, trmE, MSS1;tRNA modification GTPase [EC:3.6.-.-]
D3M96_00725	K02433	gatA, QRSL1;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D3M96_00760	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_00770	K02066	mlaE, linK;phospholipid/cholesterol/gamma-HCH transport system permease protein
D3M96_00775	K02065	mlaF, linL, mkl;phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D3M96_00810	K21393	yiaN;TRAP-type transport system large permease protein
D3M96_00830	K02182	caiC;carnitine-CoA ligase [EC:6.2.1.48]
D3M96_00855	K00285	dadA;D-amino-acid dehydrogenase [EC:1.4.5.1]
D3M96_00865	K09760	rmuC;DNA recombination protein RmuC
D3M96_00875	K21023	mucR;diguanylate cyclase [EC:2.7.7.65]
D3M96_00880	K01512	acyP;acylphosphatase [EC:3.6.1.7]
D3M96_00890	K07080	K07080;uncharacterized protein
D3M96_00900	K06177	rluA;tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D3M96_00905	K01424	E3.5.1.1, ansA, ansB;L-asparaginase [EC:3.5.1.1]
D3M96_00910	K10019	occM, nocM;octopine/nopaline transport system permease protein
D3M96_00915	K10020	occQ, nocQ;octopine/nopaline transport system permease protein
D3M96_00920	K10018	occT, nocT;octopine/nopaline transport system substrate-binding protein
D3M96_00925	K10017	hisP;histidine transport system ATP-binding protein [EC:7.4.2.1]
D3M96_00930	K00261	GLUD1_2, gdhA;glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D3M96_00935	K06997	yggS, PROSC;PLP dependent protein
D3M96_00955	K01995	livG;branched-chain amino acid transport system ATP-binding protein
D3M96_00960	K01997	livH;branched-chain amino acid transport system permease protein
D3M96_00975	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_00985	K09969	aapJ, bztA;general L-amino acid transport system substrate-binding protein
D3M96_00995	K01640	E4.1.3.4, HMGCL, hmgL;hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D3M96_01000	K04096	smf;DNA processing protein
D3M96_01005	K01462	PDF, def;peptide deformylase [EC:3.5.1.88]
D3M96_01010	K00604	MTFMT, fmt;methionyl-tRNA formyltransferase [EC:2.1.2.9]
D3M96_01015	K15270	sam;S-adenosylmethionine uptake transporter
D3M96_01030	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_01050	K21959	ftsR;LysR family transcriptional regulator, cell division regulator
D3M96_01055	K02841	waaC, rfaC;heptosyltransferase I [EC:2.4.-.-]
D3M96_01065	K03704	cspA;cold shock protein
D3M96_01070	K00963	UGP2, galU, galF;UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D3M96_01075	K03525	coaX;type III pantothenate kinase [EC:2.7.1.33]
D3M96_01080	K03524	birA;BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D3M96_01090	K07258	dacC, dacA, dacD;serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D3M96_01100	K09158	K09158;uncharacterized protein
D3M96_01105	K03801	lipB;lipoyl(octanoyl) transferase [EC:2.3.1.181]
D3M96_01110	K01692	paaF, echA;enoyl-CoA hydratase [EC:4.2.1.17]
D3M96_01115	K03644	lipA;lipoyl synthase [EC:2.8.1.8]
D3M96_01125	K03648	UNG, UDG;uracil-DNA glycosylase [EC:3.2.2.27]
D3M96_01170	K08303	K08303;putative protease [EC:3.4.-.-]
D3M96_01205	K01609	trpC;indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D3M96_01210	K00766	trpD;anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D3M96_01215	K01658	trpG;anthranilate synthase component II [EC:4.1.3.27]
D3M96_01220	K01657	trpE;anthranilate synthase component I [EC:4.1.3.27]
D3M96_01225	K01091	gph;phosphoglycolate phosphatase [EC:3.1.3.18]
D3M96_01235	K01783	rpe, RPE;ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D3M96_01240	K06195	apaG;ApaG protein
D3M96_01250	K18800	ubiI;2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D3M96_01255	K03981	dsbC;thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D3M96_01265	K03406	mcp;methyl-accepting chemotaxis protein
D3M96_01275	K00216	entA;2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D3M96_01280	K01252	entB, dhbB, vibB, mxcF;bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D3M96_01285	K02361	entC;isochorismate synthase [EC:5.4.4.2]
D3M96_01295	K08225	entS;MFS transporter, ENTS family, enterobactin (siderophore) exporter
D3M96_01300	K04780	dhbF;nonribosomal peptide synthetase DhbF
D3M96_01305	K01252	entB, dhbB, vibB, mxcF;bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D3M96_01310	K02363	entE, dhbE, vibE, mxcE;2,3-dihydroxybenzoate-AMP ligase [EC:6.3.2.14 2.7.7.58]
D3M96_01320	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_01325	K01995	livG;branched-chain amino acid transport system ATP-binding protein
D3M96_01340	K01999	livK;branched-chain amino acid transport system substrate-binding protein
D3M96_01355	K15552	tauC;taurine transport system permease protein
D3M96_01360	K02049	ABC.SN.A;NitT/TauT family transport system ATP-binding protein
D3M96_01390	K02013	ABC.FEV.A;iron complex transport system ATP-binding protein [EC:7.2.2.-]
D3M96_01395	K02015	ABC.FEV.P;iron complex transport system permease protein
D3M96_01400	K07017	K07017;uncharacterized protein
D3M96_01405	K03732	rhlB;ATP-dependent RNA helicase RhlB [EC:3.6.4.13]
D3M96_01410	K07552	bcr, tcaB;MFS transporter, DHA1 family, multidrug resistance protein
D3M96_01420	K14657	nodD;LysR family transcriptional regulator, nod-box dependent transcriptional activator
D3M96_01445	K00648	fabH;3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D3M96_01455	K00826	E2.6.1.42, ilvE;branched-chain amino acid aminotransferase [EC:2.6.1.42]
D3M96_01460	K07148	K07148;uncharacterized protein
D3M96_01470	K03827	yjaB;putative acetyltransferase [EC:2.3.1.-]
D3M96_01500	K12960	mtaD;5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D3M96_01505	K15599	thiX;putative hydroxymethylpyrimidine transport system permease protein
D3M96_01525	K02424	fliY, tcyA;L-cystine transport system substrate-binding protein
D3M96_01530	K23060	artR, artM;arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D3M96_01535	K10009	tcyB, yecS;L-cystine transport system permease protein
D3M96_01540	K10040	peb1B, glnP, glnM;aspartate/glutamate/glutamine transport system permease protein
D3M96_01545	K01714	dapA;4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D3M96_01550	K00567	ogt, MGMT;methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D3M96_01565	K13372	aauB;aralkylamine dehydrogenase heavy chain [EC:1.4.9.2]
D3M96_01580	K13371	aauA;aralkylamine dehydrogenase light chain [EC:1.4.9.2]
D3M96_01600	K01599	hemE, UROD;uroporphyrinogen decarboxylase [EC:4.1.1.37]
D3M96_01605	K04066	priA;primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
D3M96_01610	K03656	rep;ATP-dependent DNA helicase Rep [EC:3.6.4.12]
D3M96_01625	K00266	gltD;glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D3M96_01630	K00284	GLU, gltS;glutamate synthase (ferredoxin) [EC:1.4.7.1]
D3M96_01645	K18702	uctC;CoA:oxalate CoA-transferase [EC:2.8.3.19]
D3M96_01650	K00074	paaH, hbd, fadB, mmgB;3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D3M96_01670	K02014	TC.FEV.OM;iron complex outermembrane recepter protein
D3M96_01675	K01919	gshA;glutamate--cysteine ligase [EC:6.3.2.2]
D3M96_01685	K18098	bjaR1, rpaR, rhiR;LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D3M96_01690	K00641	metX;homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D3M96_01700	K08218	ampG;MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D3M96_01720	K09022	ridA, tdcF, RIDA;2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D3M96_01725	K09022	ridA, tdcF, RIDA;2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D3M96_01760	K05835	rhtC;threonine efflux protein
D3M96_01770	K01872	AARS, alaS;alanyl-tRNA synthetase [EC:6.1.1.7]
D3M96_01800	K00798	MMAB, pduO;cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D3M96_01815	K03667	hslU;ATP-dependent HslUV protease ATP-binding subunit HslU
D3M96_01820	K01419	hslV, clpQ;ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D3M96_01830	K19336	bdcA;cyclic-di-GMP-binding biofilm dispersal mediator protein
D3M96_01840	K06204	dksA;DnaK suppressor protein
D3M96_01850	K09823	zur;Fur family transcriptional regulator, zinc uptake regulator
D3M96_01860	K19976	mntB;manganese transport system permease protein
D3M96_01865	K19975	mntC;manganese transport system substrate-binding protein
D3M96_01870	K03733	xerC;integrase/recombinase XerC
D3M96_01880	K01778	dapF;diaminopimelate epimerase [EC:5.1.1.7]
D3M96_01885	K02517	lpxL, htrB;Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D3M96_01895	K00789	metK;S-adenosylmethionine synthetase [EC:2.5.1.6]
D3M96_01900	K01251	E3.3.1.1, ahcY;adenosylhomocysteinase [EC:3.3.1.1]
D3M96_01905	K08972	K08972;putative membrane protein
D3M96_01920	K08309	slt;soluble lytic murein transglycosylase [EC:4.2.2.-]
D3M96_01925	K00974	cca;tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D3M96_01940	K03438	mraW, rsmH;16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D3M96_01945	K07090	K07090;uncharacterized protein
D3M96_01950	K01595	ppc;phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D3M96_01955	K01687	ilvD;dihydroxy-acid dehydratase [EC:4.2.1.9]
D3M96_01975	K21393	yiaN;TRAP-type transport system large permease protein
D3M96_01990	K01916	nadE;NAD+ synthase [EC:6.3.1.5]
D3M96_02005	K18702	uctC;CoA:oxalate CoA-transferase [EC:2.8.3.19]
D3M96_02175	K14581	nahAa, nagAa, ndoR, nbzAa, dntAa;naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7]
D3M96_02195	K02013	ABC.FEV.A;iron complex transport system ATP-binding protein [EC:7.2.2.-]
D3M96_02220	K03777	dld;D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D3M96_02230	K14348	lldR;GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D3M96_02235	K00427	lldP, lctP;L-lactate permease
D3M96_02255	K01556	KYNU, kynU;kynureninase [EC:3.7.1.3]
D3M96_02260	K11734	aroP;aromatic amino acid transport protein AroP
D3M96_02280	K05813	ugpB;sn-glycerol 3-phosphate transport system substrate-binding protein
D3M96_02290	K17236	araQ;arabinosaccharide transport system permease protein
D3M96_02310	K07533	prsA;foldase protein PrsA [EC:5.2.1.8]
D3M96_02325	K09768	K09768;uncharacterized protein
D3M96_02335	K06950	K06950;uncharacterized protein
D3M96_02345	K18983	gci;D-galactarolactone cycloisomerase [EC:5.5.1.27]
D3M96_02370	K02433	gatA, QRSL1;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D3M96_02405	K04079	HSP90A, htpG;molecular chaperone HtpG
D3M96_02425	K03106	SRP54, ffh;signal recognition particle subunit SRP54 [EC:3.6.5.4]
D3M96_02440	K07493	K07493;putative transposase
D3M96_02450	K03149	thiG;thiazole synthase [EC:2.8.1.10]
D3M96_02460	K03439	trmB, METTL1, TRM8;tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D3M96_02490	K02456	gspG;general secretion pathway protein G
D3M96_02510	K02453	gspD;general secretion pathway protein D
D3M96_02520	K02454	gspE;general secretion pathway protein E [EC:7.4.2.8]
D3M96_02555	K02654	pilD, pppA;leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D3M96_02565	K02458	gspI;general secretion pathway protein I
D3M96_02590	K03562	tolQ;biopolymer transport protein TolQ
D3M96_02595	K03560	tolR;biopolymer transport protein TolR
D3M96_02620	K03771	surA;peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D3M96_02655	K01079	serB, PSPH;phosphoserine phosphatase [EC:3.1.3.3]
D3M96_02680	K08159	sotB;MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D3M96_02690	K06607	iolS;myo-inositol catabolism protein IolS [EC:1.1.1.-]
D3M96_02775	K03630	radC;DNA repair protein RadC
D3M96_02975	K00558	DNMT1, dcm;DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D3M96_02985	K03169	topB;DNA topoisomerase III [EC:5.6.2.1]
D3M96_03005	K03111	ssb;single-strand DNA-binding protein
D3M96_03040	K03496	parA, soj;chromosome partitioning protein
D3M96_03070	K03496	parA, soj;chromosome partitioning protein
D3M96_03105	K03111	ssb;single-strand DNA-binding protein
D3M96_03110	K03169	topB;DNA topoisomerase III [EC:5.6.2.1]
D3M96_03300	K03630	radC;DNA repair protein RadC
D3M96_03360	K03695	clpB;ATP-dependent Clp protease ATP-binding subunit ClpB
D3M96_03505	K07300	chaA, CAX;Ca2+:H+ antiporter
D3M96_03510	K02488	pleD;two-component system, cell cycle response regulator [EC:2.7.7.65]
D3M96_03520	K08172	shiA;MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D3M96_03525	K18613	K18613;3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase [EC:4.1.1.51]
D3M96_03540	K01487	E3.5.4.3, guaD;guanine deaminase [EC:3.5.4.3]
D3M96_03550	K14977	ylbA, UGHY;(S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D3M96_03575	K03593	mrp, NUBPL;ATP-binding protein involved in chromosome partitioning
D3M96_03590	K01494	dcd;dCTP deaminase [EC:3.5.4.13]
D3M96_03595	K01584	adiA;arginine decarboxylase [EC:4.1.1.19]
D3M96_03605	K02437	gcvH, GCSH;glycine cleavage system H protein
D3M96_03615	K00560	thyA, TYMS;thymidylate synthase [EC:2.1.1.45]
D3M96_03620	K07397	yhfA;putative redox protein
D3M96_03625	K00404	ccoN;cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
D3M96_03650	K06134	COQ7;3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D3M96_03655	K00873	PK, pyk;pyruvate kinase [EC:2.7.1.40]
D3M96_03660	K11477	glcG;glc operon protein GlcG
D3M96_03670	K00042	garR, glxR;2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D3M96_03675	K01816	hyi, gip;hydroxypyruvate isomerase [EC:5.3.1.22]
D3M96_03680	K01608	gcl;tartronate-semialdehyde synthase [EC:4.1.1.47]
D3M96_03685	K16135	dmlR;LysR family transcriptional regulator, transcriptional activator for dmlA
D3M96_03700	K01821	praC, xylH;4-oxalocrotonate tautomerase [EC:5.3.2.6]
D3M96_03710	K01483	allA;ureidoglycolate lyase [EC:4.3.2.3]
D3M96_03715	K16838	pucL;urate oxidase / 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:1.7.3.3 4.1.1.97]
D3M96_03725	K02851	wecA, tagO, rfe;UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D3M96_03730	K22926	tviB, vipA;UDP-N-acetylglucosamine 6-dehydrogenase [EC:1.1.1.136]
D3M96_03750	K02840	waaB, rfaB;UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
D3M96_03755	K15914	pglA;N,N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase [EC:2.4.1.290]
D3M96_03760	K01835	pgm;phosphoglucomutase [EC:5.4.2.2]
D3M96_03765	K00104	glcD;glycolate oxidase [EC:1.1.3.15]
D3M96_03780	K00451	HGD, hmgA;homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D3M96_03790	K20944	tsdB;resorcinol 4-hydroxylase (NADH) [EC:1.14.13.220]
D3M96_03800	K10563	mutM, fpg;formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D3M96_03810	K02494	lolB;outer membrane lipoprotein LolB
D3M96_03815	K00919	ispE;4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D3M96_03825	K00948	PRPS, prsA;ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D3M96_03830	K02897	RP-L25, rplY;large subunit ribosomal protein L25
D3M96_03835	K01056	PTH1, pth, spoVC;peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D3M96_03845	K06942	ychF;ribosome-binding ATPase
D3M96_03870	K15268	eamA;O-acetylserine/cysteine efflux transporter
D3M96_03880	K07695	devR;two-component system, NarL family, response regulator DevR
D3M96_03890	K06158	ABCF3;ATP-binding cassette, subfamily F, member 3
D3M96_03905	K01673	cynT, can;carbonic anhydrase [EC:4.2.1.1]
D3M96_03910	K11921	cynR;LysR family transcriptional regulator, cyn operon transcriptional activator
D3M96_03920	K02193	ccmA;heme exporter protein A [EC:7.6.2.5]
D3M96_03925	K02194	ccmB;heme exporter protein B
D3M96_03930	K02195	ccmC;heme exporter protein C
D3M96_03940	K02197	ccmE;cytochrome c-type biogenesis protein CcmE
D3M96_03945	K02198	ccmF;cytochrome c-type biogenesis protein CcmF
D3M96_03950	K02199	ccmG, dsbE;cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D3M96_03955	K02200	ccmH;cytochrome c-type biogenesis protein CcmH
D3M96_03965	K06196	ccdA;cytochrome c-type biogenesis protein
D3M96_03970	K22322	barS1;A-factor type gamma-butyrolactone 1'-reductase (1S-forming) [EC:1.1.1.413]
D3M96_03975	K10778	ada;AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D3M96_03995	K01997	livH;branched-chain amino acid transport system permease protein
D3M96_04000	K01998	livM;branched-chain amino acid transport system permease protein
D3M96_04005	K01995	livG;branched-chain amino acid transport system ATP-binding protein
D3M96_04010	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_04015	K00428	E1.11.1.5;cytochrome c peroxidase [EC:1.11.1.5]
D3M96_04020	K00058	serA, PHGDH;D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D3M96_04025	K13771	nsrR;Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D3M96_04030	K06886	glbN;hemoglobin
D3M96_04035	K20534	gtrB, csbB;polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D3M96_04070	K02379	fdhD;FdhD protein
D3M96_04075	K00123	fdoG, fdhF, fdwA;formate dehydrogenase major subunit [EC:1.17.1.9]
D3M96_04080	K18331	hndC;NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D3M96_04090	K07219	K07219;putative molybdopterin biosynthesis protein
D3M96_04095	K03639	moaA, CNX2;GTP 3',8-cyclase [EC:4.1.99.22]
D3M96_04100	K03752	mobA;molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D3M96_04105	K03750	moeA;molybdopterin molybdotransferase [EC:2.10.1.1]
D3M96_04110	K03638	moaB;molybdopterin adenylyltransferase [EC:2.7.7.75]
D3M96_04115	K03635	MOCS2B, moaE;molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D3M96_04125	K03637	moaC, CNX3;cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D3M96_04155	K03386	PRDX2_4, ahpC;peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
D3M96_04170	K01012	bioB;biotin synthase [EC:2.8.1.6]
D3M96_04175	K01075	E3.1.2.23;4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D3M96_04185	K07788	mdtB;multidrug efflux pump
D3M96_04190	K03585	acrA, mexA, adeI, smeD, mtrC, cmeA;membrane fusion protein, multidrug efflux system
D3M96_04230	K21023	mucR;diguanylate cyclase [EC:2.7.7.65]
D3M96_04235	K03820	lnt;apolipoprotein N-acyltransferase [EC:2.3.1.269]
D3M96_04240	K06189	corC;magnesium and cobalt transporter
D3M96_04245	K07042	ybeY, yqfG;probable rRNA maturation factor
D3M96_04250	K06217	phoH, phoL;phosphate starvation-inducible protein PhoH and related proteins
D3M96_04255	K06168	miaB;tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D3M96_04265	K01265	map;methionyl aminopeptidase [EC:3.4.11.18]
D3M96_04270	K03074	secF;preprotein translocase subunit SecF
D3M96_04275	K03072	secD;preprotein translocase subunit SecD
D3M96_04280	K03210	yajC;preprotein translocase subunit YajC
D3M96_04285	K00773	tgt, QTRT1;queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D3M96_04290	K07568	queA;S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D3M96_04295	K07259	dacB;serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D3M96_04300	K00761	upp, UPRT;uracil phosphoribosyltransferase [EC:2.4.2.9]
D3M96_04325	K03566	gcvA;LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D3M96_04340	K22320	oleD;2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D3M96_04355	K02433	gatA, QRSL1;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D3M96_04365	K03762	proP;MFS transporter, MHS family, proline/betaine transporter
D3M96_04390	K03182	ubiD;4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D3M96_04395	K08308	mltE, emtA;membrane-bound lytic murein transglycosylase E [EC:4.2.2.-]
D3M96_04400	K10907	K10907;aminotransferase [EC:2.6.1.-]
D3M96_04410	K00029	E1.1.1.40, maeB;malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D3M96_04420	K03623	yhcO;ribonuclease inhibitor
D3M96_04425	K09761	rsmE;16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D3M96_04430	K00615	E2.2.1.1, tktA, tktB;transketolase [EC:2.2.1.1]
D3M96_04435	K00134	GAPDH, gapA;glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
D3M96_04440	K00927	PGK, pgk;phosphoglycerate kinase [EC:2.7.2.3]
D3M96_04455	K20928	mpdC;2-hydroxy-2-methylpropanal dehydrogenase [EC:1.2.1.98]
D3M96_04460	K19630	tsaC1;4-formylbenzenesulfonate dehydrogenase [EC:1.2.1.62]
D3M96_04465	K03831	mogA;molybdopterin adenylyltransferase [EC:2.7.7.75]
D3M96_04475	K01923	purC;phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D3M96_04480	K01588	purE;5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D3M96_04485	K01589	purK;5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D3M96_04490	K07566	tsaC, rimN, SUA5;L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D3M96_04500	K02618	paaZ;oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D3M96_04505	K18244	mmgC;acyl-CoA dehydrogenase [EC:1.3.99.-]
D3M96_04515	K00681	ggt;gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D3M96_04525	K15736	lhgO;L-2-hydroxyglutarate oxidase [EC:1.1.5.-]
D3M96_04535	K00275	pdxH, PNPO;pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D3M96_04545	K22132	tcdA;tRNA threonylcarbamoyladenosine dehydratase
D3M96_04555	K01665	pabB;para-aminobenzoate synthetase component I [EC:2.6.1.85]
D3M96_04560	K03701	uvrA;excinuclease ABC subunit A
D3M96_04575	K06020	ettA;energy-dependent translational throttle protein EttA
D3M96_04595	K03608	minE;cell division topological specificity factor
D3M96_04600	K03609	minD;septum site-determining protein MinD
D3M96_04605	K03610	minC;septum site-determining protein MinC
D3M96_04610	K01886	QARS, glnS;glutaminyl-tRNA synthetase [EC:6.1.1.18]
D3M96_04620	K00426	cydB;cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D3M96_04625	K03281	TC.CIC;chloride channel protein, CIC family
D3M96_04635	K03654	recQ;ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
D3M96_04640	K00525	E1.17.4.1A, nrdA, nrdE;ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D3M96_04645	K00526	E1.17.4.1B, nrdB, nrdF;ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D3M96_04650	K11107	yfaE;ferredoxin
D3M96_04655	K15738	uup;ABC transport system ATP-binding/permease protein
D3M96_04665	K03925	mraZ;MraZ protein
D3M96_04670	K03438	mraW, rsmH;16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D3M96_04675	K03586	ftsL;cell division protein FtsL
D3M96_04680	K03587	ftsI;cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D3M96_04685	K01928	murE;UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D3M96_04690	K01000	mraY;phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D3M96_04695	K01925	murD;UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D3M96_04700	K03588	ftsW, spoVE;cell division protein FtsW
D3M96_04705	K02563	murG;UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D3M96_04710	K01924	murC;UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D3M96_04715	K01921	ddl;D-alanine-D-alanine ligase [EC:6.3.2.4]
D3M96_04720	K03589	ftsQ;cell division protein FtsQ
D3M96_04725	K03590	ftsA;cell division protein FtsA
D3M96_04730	K03531	ftsZ;cell division protein FtsZ
D3M96_04735	K02535	lpxC;UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D3M96_04750	K03070	secA;preprotein translocase subunit SecA [EC:7.4.2.8]
D3M96_04760	K06213	mgtE;magnesium transporter
D3M96_04765	K10806	yciA;acyl-CoA thioesterase YciA [EC:3.1.2.-]
D3M96_04770	K01451	hipO;hippurate hydrolase [EC:3.5.1.32]
D3M96_04775	K01897	ACSL, fadD;long-chain acyl-CoA synthetase [EC:6.2.1.3]
D3M96_04780	K01092	E3.1.3.25, IMPA, suhB;myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D3M96_04785	K15461	mnmC;tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D3M96_04800	K02071	metN;D-methionine transport system ATP-binding protein
D3M96_04805	K02072	metI;D-methionine transport system permease protein
D3M96_04810	K02073	metQ;D-methionine transport system substrate-binding protein
D3M96_04815	K10036	glnH;glutamine transport system substrate-binding protein
D3M96_04820	K10037	glnP;glutamine transport system permease protein
D3M96_04825	K10038	glnQ;glutamine transport system ATP-binding protein [EC:7.4.2.1]
D3M96_04835	K00992	murU;N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D3M96_04840	K07102	amgK;N-acetylmuramate 1-kinase [EC:2.7.1.221]
D3M96_04845	K04744	lptD, imp, ostA;LPS-assembly protein
D3M96_04850	K03771	surA;peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D3M96_04855	K02528	ksgA;16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D3M96_04860	K06374	spmB;spore maturation protein B
D3M96_04865	K01759	GLO1, gloA;lactoylglutathione lyase [EC:4.4.1.5]
D3M96_04875	K00655	plsC;1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D3M96_04880	K03273	gmhB;D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D3M96_04885	K01879	glyS;glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D3M96_04890	K01878	glyQ;glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D3M96_04900	K08299	caiD;crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D3M96_04905	K01676	E4.2.1.2A, fumA, fumB;fumarate hydratase, class I [EC:4.2.1.2]
D3M96_04910	K21962	acnR;TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D3M96_04920	K08159	sotB;MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D3M96_04930	K00950	folK;2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D3M96_04935	K00970	pcnB;poly(A) polymerase [EC:2.7.7.19]
D3M96_04945	K02313	dnaA;chromosomal replication initiator protein
D3M96_04950	K01933	purM;phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D3M96_04955	K03457	TC.NCS1;nucleobase:cation symporter-1, NCS1 family
D3M96_04960	K00791	miaA, TRIT1;tRNA dimethylallyltransferase [EC:2.5.1.75]
D3M96_04965	K03572	mutL;DNA mismatch repair protein MutL
D3M96_04970	K03975	dedA;membrane-associated protein
D3M96_04975	K03734	apbE;FAD:protein FMN transferase [EC:2.7.1.180]
D3M96_04980	K00380	cysJ;sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D3M96_04995	K01448	amiABC;N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D3M96_05000	K06925	tsaE;tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D3M96_05015	K00029	E1.1.1.40, maeB;malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D3M96_05020	K02623	pcaQ;LysR family transcriptional regulator, pca operon transcriptional activator
D3M96_05025	K09472	puuC, aldH;4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D3M96_05030	K01714	dapA;4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D3M96_05040	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_05075	K07118	K07118;uncharacterized protein
D3M96_05085	K02575	NRT, narK, nrtP, nasA;MFS transporter, NNP family, nitrate/nitrite transporter
D3M96_05095	K03976	ybaK, ebsC;Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D3M96_05100	K04763	xerD;integrase/recombinase XerD
D3M96_05105	K02020	modA;molybdate transport system substrate-binding protein
D3M96_05110	K02018	modB;molybdate transport system permease protein
D3M96_05115	K02017	modC;molybdate transport system ATP-binding protein [EC:7.3.2.5]
D3M96_05130	K16898	addA;ATP-dependent helicase/nuclease subunit A [EC:3.1.-.- 3.6.4.12]
D3M96_05140	K02343	dnaX;DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D3M96_05145	K09747	K09747;uncharacterized protein
D3M96_05150	K06187	recR;recombination protein RecR
D3M96_05160	K02049	ABC.SN.A;NitT/TauT family transport system ATP-binding protein
D3M96_05165	K15554	ssuC;sulfonate transport system permease protein
D3M96_05190	K00616	E2.2.1.2, talA, talB;transaldolase [EC:2.2.1.2]
D3M96_05195	K01956	carA, CPA1;carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D3M96_05200	K01955	carB, CPA2;carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D3M96_05215	K15634	gpmB;probable phosphoglycerate mutase [EC:5.4.2.12]
D3M96_05220	K09016	rutG;putative pyrimidine permease RutG
D3M96_05225	K03624	greA;transcription elongation factor GreA
D3M96_05230	K07574	yhbY;RNA-binding protein
D3M96_05235	K02427	rlmE, rrmJ, ftsJ;23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D3M96_05240	K03798	ftsH, hflB;cell division protease FtsH [EC:3.4.24.-]
D3M96_05245	K00796	folP;dihydropteroate synthase [EC:2.5.1.15]
D3M96_05250	K03431	glmM;phosphoglucosamine mutase [EC:5.4.2.10]
D3M96_05270	K00937	ppk;polyphosphate kinase [EC:2.7.4.1]
D3M96_05275	K02040	pstS;phosphate transport system substrate-binding protein
D3M96_05280	K02037	pstC;phosphate transport system permease protein
D3M96_05285	K02038	pstA;phosphate transport system permease protein
D3M96_05290	K02036	pstB;phosphate transport system ATP-binding protein [EC:7.3.2.1]
D3M96_05300	K01895	ACSS, acs;acetyl-CoA synthetase [EC:6.2.1.1]
D3M96_05315	K07660	phoP;two-component system, OmpR family, response regulator PhoP
D3M96_05320	K08479	sasA;two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3]
D3M96_05330	K01713	pheC;cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D3M96_05385	K14393	actP;cation/acetate symporter
D3M96_05405	K07493	K07493;putative transposase
D3M96_05425	K02616	paaX;phenylacetic acid degradation operon negative regulatory protein
D3M96_05430	K06131	clsA_B;cardiolipin synthase A/B [EC:2.7.8.-]
D3M96_05455	K01714	dapA;4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D3M96_05460	K07287	bamC;outer membrane protein assembly factor BamC
D3M96_05475	K01935	bioD;dethiobiotin synthetase [EC:6.3.3.3]
D3M96_05485	K00652	bioF;8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D3M96_05490	K15468	pksS;cytochrome P450 PksS
D3M96_05495	K05782	benE;benzoate membrane transport protein
D3M96_05500	K18850	ycfD;50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D3M96_05505	K03555	mutS;DNA mismatch repair protein MutS
D3M96_05510	K14059	int;integrase
D3M96_05550	K03630	radC;DNA repair protein RadC
D3M96_05565	K18199	inhA;cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D3M96_05600	K03562	tolQ;biopolymer transport protein TolQ
D3M96_05605	K03560	tolR;biopolymer transport protein TolR
D3M96_05630	K03771	surA;peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D3M96_05650	K11811	arsH;arsenical resistance protein ArsH
D3M96_05655	K03325	ACR3, arsB;arsenite transporter
D3M96_05660	K20201	ywlE;protein arginine phosphatase [EC:3.9.1.2]
D3M96_05665	K03892	arsR;ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D3M96_05670	K03630	radC;DNA repair protein RadC
D3M96_05675	K03070	secA;preprotein translocase subunit SecA [EC:7.4.2.8]
D3M96_05695	K07301	yrbG;cation:H+ antiporter
D3M96_05710	K03497	parB, spo0J;ParB family transcriptional regulator, chromosome partitioning protein
D3M96_05800	K07746	parD1_3_4;antitoxin ParD1/3/4
D3M96_05840	K20527	trbB;type IV secretion system protein TrbB [EC:7.4.2.8]
D3M96_05885	K20533	trbI;type IV secretion system protein TrbI
D3M96_05980	K15342	cas1;CRISP-associated protein Cas1
D3M96_05985	K07012	cas3;CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 3.6.4.-]
D3M96_05990	K19127	csy1;CRISPR-associated protein Csy1
D3M96_05995	K19128	csy2;CRISPR-associated protein Csy2
D3M96_06000	K19129	csy3;CRISPR-associated protein Csy3
D3M96_06005	K19130	csy4, cas6f;CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D3M96_06020	K07796	cusC, silC;outer membrane protein, Cu(I)/Ag(I) efflux system
D3M96_06025	K02564	nagB, GNPDA;glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D3M96_06030	K18893	vcaM;ATP-binding cassette, subfamily B, multidrug efflux pump
D3M96_06035	K22602	hpxW;oxamate amidohydrolase [EC:3.5.1.126]
D3M96_06060	K03442	mscS;small conductance mechanosensitive channel
D3M96_06070	K16000	pikAI;narbonolide/10-deoxymethynolide synthase [EC:2.3.1.240 2.3.1.239]
D3M96_06090	K20510	madC;malonyl-S-ACP:biotin-protein carboxyltransferase subunit MadC [EC:2.1.3.10]
D3M96_06100	K13929	mdcA;malonate decarboxylase alpha subunit [EC:2.3.1.187]
D3M96_06105	K02433	gatA, QRSL1;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D3M96_06110	K02106	atoE;short-chain fatty acids transporter
D3M96_06120	K15396	trmJ;tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D3M96_06125	K01092	E3.1.3.25, IMPA, suhB;myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D3M96_06135	K06153	bacA;undecaprenyl-diphosphatase [EC:3.6.1.27]
D3M96_06150	K03269	lpxH;UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D3M96_06165	K01883	CARS, cysS;cysteinyl-tRNA synthetase [EC:6.1.1.16]
D3M96_06175	K01962	accA;acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D3M96_06180	K04075	tilS, mesJ;tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D3M96_06185	K00928	lysC;aspartate kinase [EC:2.7.2.4]
D3M96_06200	K04087	hflC;membrane protease subunit HflC [EC:3.4.-.-]
D3M96_06210	K02855	rhaS;AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D3M96_06215	K20766	E3.5.5.5;arylacetonitrilase [EC:3.5.5.5]
D3M96_06225	K08279	caiE;carnitine operon protein CaiE
D3M96_06240	K02047	cysW;sulfate/thiosulfate transport system permease protein
D3M96_06245	K11072	potA;spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D3M96_06250	K00324	pntA;H+-translocating NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2 7.1.1.1]
D3M96_06255	K00324	pntA;H+-translocating NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2 7.1.1.1]
D3M96_06260	K00325	pntB;H+-translocating NAD(P) transhydrogenase subunit beta [EC:1.6.1.2 7.1.1.1]
D3M96_06280	K00101	lldD;L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D3M96_06285	K07393	ECM4, yqjG;glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D3M96_06290	K03809	wrbA;NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D3M96_06305	K03652	MPG;DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D3M96_06310	K21053	ade;adenine deaminase [EC:3.5.4.2]
D3M96_06320	K03284	corA;magnesium transporter
D3M96_06325	K09456	aidB;putative acyl-CoA dehydrogenase
D3M96_06335	K12368	dppA;dipeptide transport system substrate-binding protein
D3M96_06340	K02033	ABC.PE.P;peptide/nickel transport system permease protein
D3M96_06345	K15582	oppC;oligopeptide transport system permease protein
D3M96_06350	K13892	gsiA;glutathione transport system ATP-binding protein
D3M96_06360	K21405	acoR;sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D3M96_06365	K00138	aldB;aldehyde dehydrogenase [EC:1.2.1.-]
D3M96_06370	K13954	yiaY;alcohol dehydrogenase [EC:1.1.1.1]
D3M96_06375	K02356	efp;elongation factor P
D3M96_06405	K01682	acnB;aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D3M96_06430	K02688	prpR;transcriptional regulator, propionate catabolism operon regulatory protein
D3M96_06445	K00024	mdh;malate dehydrogenase [EC:1.1.1.37]
D3M96_06450	K10711	frlR;GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D3M96_06455	K00241	sdhC, frdC;succinate dehydrogenase / fumarate reductase, cytochrome b subunit
D3M96_06470	K00240	sdhB, frdB;succinate dehydrogenase / fumarate reductase, iron-sulfur subunit [EC:1.3.5.1 1.3.5.4]
D3M96_06475	K09159	cptB;antitoxin CptB
D3M96_06480	K01647	CS, gltA;citrate synthase [EC:2.3.3.1]
D3M96_06485	K14348	lldR;GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D3M96_06490	K03303	lctP;lactate permease
D3M96_06495	K00029	E1.1.1.40, maeB;malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D3M96_06500	K00164	OGDH, sucA;2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D3M96_06505	K00658	DLST, sucB;2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D3M96_06510	K00382	DLD, lpd, pdhD;dihydrolipoamide dehydrogenase [EC:1.8.1.4]
D3M96_06515	K06916	zapE;cell division protein ZapE
D3M96_06520	K01867	WARS, trpS;tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D3M96_06525	K00638	catB;chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D3M96_06535	K06959	tex;protein Tex
D3M96_06540	K03722	dinG;ATP-dependent DNA helicase DinG [EC:3.6.4.12]
D3M96_06545	K03321	TC.SULP;sulfate permease, SulP family
D3M96_06550	K04030	eutQ;ethanolamine utilization protein EutQ
D3M96_06570	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_06575	K03577	acrR, smeT;TetR/AcrR family transcriptional regulator, acrAB operon repressor
D3M96_06580	K05807	bamD;outer membrane protein assembly factor BamD
D3M96_06585	K06180	rluD;23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D3M96_06590	K05810	yfiH;polyphenol oxidase [EC:1.10.3.-]
D3M96_06595	K03821	phbC, phaC;polyhydroxyalkanoate synthase subunit PhaC [EC:2.3.1.-]
D3M96_06600	K00023	phbB;acetoacetyl-CoA reductase [EC:1.1.1.36]
D3M96_06630	K06024	scpB;segregation and condensation protein B
D3M96_06635	K06178	rluB;23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D3M96_06640	K09748	rimP;ribosome maturation factor RimP
D3M96_06645	K02600	nusA;transcription termination/antitermination protein NusA
D3M96_06650	K02519	infB, MTIF2;translation initiation factor IF-2
D3M96_06655	K02834	rbfA;ribosome-binding factor A
D3M96_06660	K03177	truB, PUS4, TRUB1;tRNA pseudouridine55 synthase [EC:5.4.99.25]
D3M96_06665	K06207	typA, bipA;GTP-binding protein
D3M96_06670	K17218	sqr;sulfide:quinone oxidoreductase [EC:1.8.5.4]
D3M96_06680	K10015	hisM;histidine transport system permease protein
D3M96_06685	K10016	hisQ;histidine transport system permease protein
D3M96_06690	K10013	argT;lysine/arginine/ornithine transport system substrate-binding protein
D3M96_06700	K02335	polA;DNA polymerase I [EC:2.7.7.7]
D3M96_06705	K03324	yjbB;phosphate:Na+ symporter
D3M96_06710	K03799	htpX;heat shock protein HtpX [EC:3.4.24.-]
D3M96_06720	K01011	TST, MPST, sseA;thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D3M96_06725	K03602	xseB;exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D3M96_06730	K00795	ispA;farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D3M96_06735	K01662	dxs;1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D3M96_06740	K09007	folE2;GTP cyclohydrolase IB [EC:3.5.4.16]
D3M96_06745	K02990	RP-S6, MRPS6, rpsF;small subunit ribosomal protein S6
D3M96_06750	K02686	priB;primosomal replication protein N
D3M96_06755	K02963	RP-S18, MRPS18, rpsR;small subunit ribosomal protein S18
D3M96_06760	K02939	RP-L9, MRPL9, rplI;large subunit ribosomal protein L9
D3M96_06765	K02314	dnaB;replicative DNA helicase [EC:3.6.4.12]
D3M96_06770	K14347	SLC10A7, P7;solute carrier family 10 (sodium/bile acid cotransporter), member 7
D3M96_06775	K22024	pdxA2;4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D3M96_06780	K07175	phoH2;PhoH-like ATPase
D3M96_06785	K03564	BCP, PRXQ, DOT5;peroxiredoxin Q/BCP [EC:1.11.1.15]
D3M96_06795	K14261	alaC;alanine-synthesizing transaminase [EC:2.6.1.-]
D3M96_06800	K00003	hom;homoserine dehydrogenase [EC:1.1.1.3]
D3M96_06815	K00657	speG, SAT;diamine N-acetyltransferase [EC:2.3.1.57]
D3M96_06820	K00514	ZDS, crtQ;zeta-carotene desaturase [EC:1.3.5.6]
D3M96_06825	K02291	crtB;15-cis-phytoene synthase [EC:2.5.1.32]
D3M96_06830	K21679	hpnC;hydroxysqualene synthase [EC:4.2.3.156]
D3M96_06835	K01775	alr;alanine racemase [EC:5.1.1.1]
D3M96_06840	K00059	fabG, OAR1;3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D3M96_06845	K04485	radA, sms;DNA repair protein RadA/Sms
D3M96_06855	K11211	kdkA;3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D3M96_06860	K11073	potF;putrescine transport system substrate-binding protein
D3M96_06865	K11076	potG;putrescine transport system ATP-binding protein
D3M96_06870	K11075	potH;putrescine transport system permease protein
D3M96_06875	K11074	potI;putrescine transport system permease protein
D3M96_06880	K16509	spxA;regulatory protein spx
D3M96_06885	K01807	rpiA;ribose 5-phosphate isomerase A [EC:5.3.1.6]
D3M96_06905	K14682	argAB;amino-acid N-acetyltransferase [EC:2.3.1.1]
D3M96_06910	K03578	hrpA;ATP-dependent helicase HrpA [EC:3.6.4.13]
D3M96_06915	K02337	dnaE;DNA polymerase III subunit alpha [EC:2.7.7.7]
D3M96_06920	K00754	bshA;L-malate glycosyltransferase [EC:2.4.1.-]
D3M96_06940	K15521	mshA;D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D3M96_06950	K06940	K06940;uncharacterized protein
D3M96_06965	K11085	msbA;ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
D3M96_06980	K08301	rng, cafA;ribonuclease G [EC:3.1.26.-]
D3M96_06985	K07493	K07493;putative transposase
D3M96_07030	K11474	glcC;GntR family transcriptional regulator, glc operon transcriptional activator
D3M96_07035	K00104	glcD;glycolate oxidase [EC:1.1.3.15]
D3M96_07040	K11472	glcE;glycolate oxidase FAD binding subunit
D3M96_07045	K11473	glcF;glycolate oxidase iron-sulfur subunit
D3M96_07050	K10219	ligC;2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D3M96_07075	K10220	ligJ;4-oxalmesaconate hydratase [EC:4.2.1.83]
D3M96_07080	K08195	pcaK;MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D3M96_07120	K00481	pobA;p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D3M96_07150	K03324	yjbB;phosphate:Na+ symporter
D3M96_07210	K07112	K07112;uncharacterized protein
D3M96_07225	K01534	zntA;Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 7.2.2.12]
D3M96_07230	K03321	TC.SULP;sulfate permease, SulP family
D3M96_07245	K00864	glpK, GK;glycerol kinase [EC:2.7.1.30]
D3M96_07250	K00111	glpA, glpD;glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D3M96_07255	K19223	lytF, cwlE;peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D3M96_07260	K02403	flhD;flagellar transcriptional activator FlhD
D3M96_07265	K02402	flhC;flagellar transcriptional activator FlhC
D3M96_07270	K02556	motA;chemotaxis protein MotA
D3M96_07275	K02557	motB;chemotaxis protein MotB
D3M96_07280	K03407	cheA;two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D3M96_07285	K03408	cheW;purine-binding chemotaxis protein CheW
D3M96_07290	K05877	tap;methyl-accepting chemotaxis protein IV, peptide sensor receptor
D3M96_07295	K00575	cheR;chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D3M96_07300	K03412	cheB;two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D3M96_07310	K03414	cheZ;chemotaxis protein CheZ
D3M96_07315	K02401	flhB;flagellar biosynthetic protein FlhB
D3M96_07325	K02404	flhF;flagellar biosynthesis protein FlhF
D3M96_07330	K07154	hipA;serine/threonine-protein kinase HipA [EC:2.7.11.1]
D3M96_07345	K02398	flgM;negative regulator of flagellin synthesis FlgM
D3M96_07360	K02388	flgC;flagellar basal-body rod protein FlgC
D3M96_07365	K02389	flgD;flagellar basal-body rod modification protein FlgD
D3M96_07370	K02390	flgE;flagellar hook protein FlgE
D3M96_07375	K02391	flgF;flagellar basal-body rod protein FlgF
D3M96_07380	K02392	flgG;flagellar basal-body rod protein FlgG
D3M96_07385	K02393	flgH;flagellar L-ring protein precursor FlgH
D3M96_07390	K02394	flgI;flagellar P-ring protein precursor FlgI
D3M96_07395	K02395	flgJ;flagellar protein FlgJ
D3M96_07400	K02396	flgK;flagellar hook-associated protein 1 FlgK
D3M96_07405	K02397	flgL;flagellar hook-associated protein 3 FlgL
D3M96_07410	K05875	tar;methyl-accepting chemotaxis protein II, aspartate sensor receptor
D3M96_07420	K05874	tsr;methyl-accepting chemotaxis protein I, serine sensor receptor
D3M96_07435	K02421	fliR;flagellar biosynthetic protein FliR
D3M96_07440	K02420	fliQ;flagellar biosynthetic protein FliQ
D3M96_07455	K02417	fliNY, fliN;flagellar motor switch protein FliN/FliY
D3M96_07460	K02416	fliM;flagellar motor switch protein FliM
D3M96_07465	K02415	fliL;flagellar FliL protein
D3M96_07475	K02413	fliJ;flagellar FliJ protein
D3M96_07480	K02412	fliI;flagellum-specific ATP synthase [EC:7.4.2.8]
D3M96_07490	K02410	fliG;flagellar motor switch protein FliG
D3M96_07495	K02409	fliF;flagellar M-ring protein FliF
D3M96_07500	K02408	fliE;flagellar hook-basal body complex protein FliE
D3M96_07505	K02401	flhB;flagellar biosynthetic protein FlhB
D3M96_07520	K02422	fliS;flagellar protein FliS
D3M96_07530	K06603	flaG;flagellar protein FlaG
D3M96_07535	K02405	fliA;RNA polymerase sigma factor for flagellar operon FliA
D3M96_07545	K02406	fliC;flagellin
D3M96_07580	K09810	lolD;lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
D3M96_07590	K13444	SUMF1, FGE;formylglycine-generating enzyme [EC:1.8.3.7]
D3M96_07615	K03776	aer;aerotaxis receptor
D3M96_07620	K03776	aer;aerotaxis receptor
D3M96_07665	K03733	xerC;integrase/recombinase XerC
D3M96_07695	K00059	fabG, OAR1;3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D3M96_07700	K17850	ampR;LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D3M96_07710	K19837	atzE;1-carboxybiuret hydrolase [EC:3.5.1.131]
D3M96_07725	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_07730	K06193	phnA;protein PhnA
D3M96_07750	K00428	E1.11.1.5;cytochrome c peroxidase [EC:1.11.1.5]
D3M96_07755	K13954	yiaY;alcohol dehydrogenase [EC:1.1.1.1]
D3M96_07765	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_07775	K16052	ynaI, mscMJ;MscS family membrane protein
D3M96_07780	K11737	cycA;D-serine/D-alanine/glycine transporter
D3M96_07785	K06188	aqpZ;aquaporin Z
D3M96_07835	K07344	trbL;type IV secretion system protein TrbL
D3M96_07860	K20528	trbC;type IV secretion system protein TrbC
D3M96_07865	K20527	trbB;type IV secretion system protein TrbB [EC:7.4.2.8]
D3M96_07890	K08159	sotB;MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D3M96_07935	K03496	parA, soj;chromosome partitioning protein
D3M96_08005	K12132	prkC, stkP;eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D3M96_08010	K12132	prkC, stkP;eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D3M96_08015	K03630	radC;DNA repair protein RadC
D3M96_08065	K17229	fccB;sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D3M96_08090	K03704	cspA;cold shock protein
D3M96_08095	K07645	qseC;two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D3M96_08100	K07666	qseB;two-component system, OmpR family, response regulator QseB
D3M96_08105	K00404	ccoN;cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
D3M96_08120	K19713	tsdA;thiosulfate dehydrogenase [EC:1.8.2.2]
D3M96_08125	K07493	K07493;putative transposase
D3M96_08130	K07313	pphA;serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D3M96_08135	K02014	TC.FEV.OM;iron complex outermembrane recepter protein
D3M96_08160	K05595	marC;multiple antibiotic resistance protein
D3M96_08170	K03316	TC.CPA1;monovalent cation:H+ antiporter, CPA1 family
D3M96_08180	K15549	mdtN;membrane fusion protein, multidrug efflux system
D3M96_08190	K06901	pbuG;putative MFS transporter, AGZA family, xanthine/uracil permease
D3M96_08210	K07152	SCO1_2;protein SCO1/2
D3M96_08235	K03742	pncC;nicotinamide-nucleotide amidase [EC:3.5.1.42]
D3M96_08240	K01681	ACO, acnA;aconitate hydratase [EC:4.2.1.3]
D3M96_08250	K20451	mii;methylitaconate Delta-isomerase [EC:5.3.3.6]
D3M96_08265	K05708	hcaE, hcaA1;3-phenylpropionate/trans-cinnamate dioxygenase subunit alpha [EC:1.14.12.19]
D3M96_08270	K20808	cbdB;2-halobenzoate 1,2-dioxygenase small subunit [EC:1.14.12.13]
D3M96_08290	K18119	sucD;succinate-semialdehyde dehydrogenase [EC:1.2.1.76]
D3M96_08295	K00059	fabG, OAR1;3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D3M96_08315	K22051	mscM, bspA;miniconductance mechanosensitive channel
D3M96_08320	K22051	mscM, bspA;miniconductance mechanosensitive channel
D3M96_08325	K03762	proP;MFS transporter, MHS family, proline/betaine transporter
D3M96_08350	K10715	rpfC;two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D3M96_08355	K06213	mgtE;magnesium transporter
D3M96_08365	K03313	nhaA;Na+:H+ antiporter, NhaA family
D3M96_08370	K07560	dtd, DTD;D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D3M96_08390	K09858	K09858;SEC-C motif domain protein
D3M96_08395	K07387	K07387;metalloprotease [EC:3.4.24.-]
D3M96_08465	K18967	dge1;diguanylate cyclase [EC:2.7.7.65]
D3M96_08480	K05800	ybaO;Lrp/AsnC family transcriptional regulator
D3M96_08485	K01760	metC;cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D3M96_08495	K03574	mutT, NUDT15, MTH2;8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D3M96_08500	K09790	K09790;uncharacterized protein
D3M96_08510	K01940	argG, ASS1;argininosuccinate synthase [EC:6.3.4.5]
D3M96_08520	K03651	cpdA;3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D3M96_08525	K02045	cysA;sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D3M96_08540	K11081	phnS;2-aminoethylphosphonate transport system substrate-binding protein
D3M96_08545	K02529	lacI, galR;LacI family transcriptional regulator
D3M96_08550	K01951	guaA, GMPS;GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D3M96_08560	K01546	kdpA;potassium-transporting ATPase potassium-binding subunit
D3M96_08565	K01548	kdpC;potassium-transporting ATPase KdpC subunit
D3M96_08570	K01547	kdpB;potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D3M96_08575	K07646	kdpD;two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D3M96_08580	K07667	kdpE;two-component system, OmpR family, KDP operon response regulator KdpE
D3M96_08585	K00611	OTC, argF, argI;ornithine carbamoyltransferase [EC:2.1.3.3]
D3M96_08595	K22229	K22229;2-ketogluconate reductase [EC:1.1.1.215]
D3M96_08600	K02968	RP-S20, rpsT;small subunit ribosomal protein S20
D3M96_08605	K03980	murJ, mviN;putative peptidoglycan lipid II flippase
D3M96_08615	K00939	adk, AK;adenylate kinase [EC:2.7.4.3]
D3M96_08620	K00979	kdsB;3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D3M96_08625	K09791	K09791;uncharacterized protein
D3M96_08630	K00912	lpxK;tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D3M96_08635	K03559	exbD;biopolymer transport protein ExbD
D3M96_08645	K03601	xseA;exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D3M96_08650	K04564	SOD2;superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
D3M96_08655	K03594	bfr;bacterioferritin [EC:1.16.3.1]
D3M96_08660	K00632	fadA, fadI;acetyl-CoA acyltransferase [EC:2.3.1.16]
D3M96_08670	K03704	cspA;cold shock protein
D3M96_08675	K06891	clpS;ATP-dependent Clp protease adaptor protein ClpS
D3M96_08680	K03694	clpA;ATP-dependent Clp protease ATP-binding subunit ClpA
D3M96_08685	K03808	pqiA;paraquat-inducible protein A
D3M96_08690	K06192	pqiB;paraquat-inducible protein B
D3M96_08705	K01999	livK;branched-chain amino acid transport system substrate-binding protein
D3M96_08710	K01997	livH;branched-chain amino acid transport system permease protein
D3M96_08715	K01998	livM;branched-chain amino acid transport system permease protein
D3M96_08720	K01995	livG;branched-chain amino acid transport system ATP-binding protein
D3M96_08725	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_08760	K06970	rlmF;23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D3M96_08765	K01520	dut, DUT;dUTP pyrophosphatase [EC:3.6.1.23]
D3M96_08770	K13038	coaBC, dfp;phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D3M96_08775	K03101	lspA;signal peptidase II [EC:3.4.23.36]
D3M96_08780	K01870	IARS, ileS;isoleucyl-tRNA synthetase [EC:6.1.1.5]
D3M96_08790	K11175	purN;phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D3M96_08795	K03500	rsmB, sun;16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D3M96_08805	K03657	uvrD, pcrA;DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
D3M96_08830	K06158	ABCF3;ATP-binding cassette, subfamily F, member 3
D3M96_08835	K07320	prmB;ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D3M96_08840	K01439	dapE;succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D3M96_08845	K00674	dapD;2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D3M96_08910	K13639	soxR;MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D3M96_08925	K18313	sct;succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D3M96_08930	K03545	tig;trigger factor
D3M96_08935	K01358	clpP, CLPP;ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D3M96_08940	K03544	clpX, CLPX;ATP-dependent Clp protease ATP-binding subunit ClpX
D3M96_08945	K01338	lon;ATP-dependent Lon protease [EC:3.4.21.53]
D3M96_08950	K01356	lexA;repressor LexA [EC:3.4.21.88]
D3M96_08960	K00832	tyrB;aromatic-amino-acid transaminase [EC:2.6.1.57]
D3M96_08965	K03702	uvrB;excinuclease ABC subunit B
D3M96_08970	K01104	E3.1.3.48;protein-tyrosine phosphatase [EC:3.1.3.48]
D3M96_08975	K13643	iscR;Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D3M96_08980	K04487	iscS, NFS1;cysteine desulfurase [EC:2.8.1.7]
D3M96_08990	K13628	iscA;iron-sulfur cluster assembly protein
D3M96_09005	K04567	KARS, lysS;lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D3M96_09020	K05877	tap;methyl-accepting chemotaxis protein IV, peptide sensor receptor
D3M96_09025	K02518	infA;translation initiation factor IF-1
D3M96_09035	K03453	TC.BASS;bile acid:Na+ symporter, BASS family
D3M96_09045	K07462	recJ;single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D3M96_09055	K09808	lolC_E;lipoprotein-releasing system permease protein
D3M96_09060	K09810	lolD;lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
D3M96_09065	K03424	tatD;TatD DNase family protein [EC:3.1.21.-]
D3M96_09075	K01563	dhaA;haloalkane dehalogenase [EC:3.8.1.5]
D3M96_09080	K07053	E3.1.3.97;3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D3M96_09085	K04760	greB;transcription elongation factor GreB
D3M96_09090	K01952	PFAS, purL;phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D3M96_09105	K01951	guaA, GMPS;GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D3M96_09155	K03576	metR;LysR family transcriptional regulator, regulator for metE and metH
D3M96_09160	K00549	metE;5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D3M96_09170	K22363	etnE;2-hydroxypropyl-CoM lyase [EC:4.4.1.23]
D3M96_09170	K00549	metE;5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D3M96_09180	K09456	aidB;putative acyl-CoA dehydrogenase
D3M96_09205	K09007	folE2;GTP cyclohydrolase IB [EC:3.5.4.16]
D3M96_09210	K08998	K08998;uncharacterized protein
D3M96_09220	K01465	URA4, pyrC;dihydroorotase [EC:3.5.2.3]
D3M96_09225	K03711	fur, zur, furB;Fur family transcriptional regulator, ferric uptake regulator
D3M96_09230	K01496	hisI;phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D3M96_09250	K05916	hmp, YHB1;nitric oxide dioxygenase [EC:1.14.12.17]
D3M96_09260	K00459	ncd2, npd;nitronate monooxygenase [EC:1.13.12.16]
D3M96_09295	K16135	dmlR;LysR family transcriptional regulator, transcriptional activator for dmlA
D3M96_09315	K03574	mutT, NUDT15, MTH2;8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D3M96_09320	K11209	yghU, yfcG;GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D3M96_09325	K01358	clpP, CLPP;ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D3M96_09345	K12243	pchR;AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D3M96_09350	K15954	dnrK, dauK;carminomycin 4-O-methyltransferase [EC:2.1.1.292]
D3M96_09360	K21147	moeZR, moeBR;sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D3M96_09380	K20423	ncsB2;2-hydroxy-7-methoxy-5-methyl-1-naphthoate---CoA ligase [EC:6.2.1.43]
D3M96_09385	K00248	ACADS, bcd;butyryl-CoA dehydrogenase [EC:1.3.8.1]
D3M96_09430	K02855	rhaS;AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D3M96_09435	K01649	leuA, IMS;2-isopropylmalate synthase [EC:2.3.3.13]
D3M96_09460	K03381	catA;catechol 1,2-dioxygenase [EC:1.13.11.1]
D3M96_09470	K01032	pcaJ;3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D3M96_09475	K01055	pcaD;3-oxoadipate enol-lactonase [EC:3.1.1.24]
D3M96_09485	K05782	benE;benzoate membrane transport protein
D3M96_09505	K09697	natA;sodium transport system ATP-binding protein [EC:7.2.2.4]
D3M96_09515	K11618	liaR;two-component system, NarL family, response regulator LiaR
D3M96_09550	K22296	nicR;MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D3M96_09555	K14974	nicC;6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114]
D3M96_09570	K06997	yggS, PROSC;PLP dependent protein
D3M96_09580	K15269	pecM;probable blue pigment (indigoidine) exporter
D3M96_09600	K00285	dadA;D-amino-acid dehydrogenase [EC:1.4.5.1]
D3M96_09605	K00278	nadB;L-aspartate oxidase [EC:1.4.3.16]
D3M96_09610	K03517	nadA;quinolinate synthase [EC:2.5.1.72]
D3M96_09655	K09946	K09946;uncharacterized protein
D3M96_09665	K03761	kgtP;MFS transporter, MHS family, alpha-ketoglutarate permease
D3M96_09670	K02433	gatA, QRSL1;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D3M96_09695	K02424	fliY, tcyA;L-cystine transport system substrate-binding protein
D3M96_09700	K10009	tcyB, yecS;L-cystine transport system permease protein
D3M96_09705	K10009	tcyB, yecS;L-cystine transport system permease protein
D3M96_09710	K10004	gltL, aatP;glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D3M96_09740	K16243	dmpL, poxB, tomA1;phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243]
D3M96_09760	K16246	dmpP, poxF, tomA5;phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243]
D3M96_09780	K08686	cbdA;2-halobenzoate 1,2-dioxygenase large subunit [EC:1.14.12.13]
D3M96_09800	K05548	benK;MFS transporter, AAHS family, benzoate transport protein
D3M96_09810	K05834	rhtB;homoserine/homoserine lactone efflux protein
D3M96_09830	K12960	mtaD;5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D3M96_09855	K07340	ybbJ;inner membrane protein
D3M96_09870	K09712	K09712;uncharacterized protein
D3M96_09880	K18478	yihV;sulfofructose kinase [EC:2.7.1.184]
D3M96_09890	K01868	TARS, thrS;threonyl-tRNA synthetase [EC:6.1.1.3]
D3M96_09895	K02520	infC, MTIF3;translation initiation factor IF-3
D3M96_09900	K01920	gshB;glutathione synthase [EC:6.3.2.3]
D3M96_09910	K11189	PTS-HPR;phosphocarrier protein
D3M96_09915	K08483	PTS-EI.PTSI, ptsI;phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
D3M96_09940	K07391	comM;magnesium chelatase family protein
D3M96_09950	K02916	RP-L35, MRPL35, rpmI;large subunit ribosomal protein L35
D3M96_09955	K02887	RP-L20, MRPL20, rplT;large subunit ribosomal protein L20
D3M96_09960	K01889	FARSA, pheS;phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D3M96_09965	K01890	FARSB, pheT;phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D3M96_09970	K04764	ihfA, himA;integration host factor subunit alpha
D3M96_09990	K06147	ABCB-BAC;ATP-binding cassette, subfamily B, bacterial
D3M96_09995	K13643	iscR;Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D3M96_10000	K09014	sufB;Fe-S cluster assembly protein SufB
D3M96_10005	K09013	sufC;Fe-S cluster assembly ATP-binding protein
D3M96_10010	K09015	sufD;Fe-S cluster assembly protein SufD
D3M96_10015	K11717	sufS;cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D3M96_10020	K04488	iscU, nifU;nitrogen fixation protein NifU and related proteins
D3M96_10040	K06214	csgG;curli production assembly/transport component CsgG
D3M96_10045	K04338	csgF;curli production assembly/transport component CsgF
D3M96_10060	K11936	pgaC, icaA;poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D3M96_10065	K11931	pgaB;poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
D3M96_10070	K11935	pgaA;biofilm PGA synthesis protein PgaA
D3M96_10085	K03704	cspA;cold shock protein
D3M96_10100	K07484	K07484;transposase
D3M96_10140	K01751	E4.3.1.15;diaminopropionate ammonia-lyase [EC:4.3.1.15]
D3M96_10150	K02035	ABC.PE.S;peptide/nickel transport system substrate-binding protein
D3M96_10155	K02033	ABC.PE.P;peptide/nickel transport system permease protein
D3M96_10160	K02034	ABC.PE.P1;peptide/nickel transport system permease protein
D3M96_10165	K13892	gsiA;glutathione transport system ATP-binding protein
D3M96_10175	K01439	dapE;succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D3M96_10230	K19746	dauA;D-arginine dehydrogenase [EC:1.4.99.6]
D3M96_10245	K13444	SUMF1, FGE;formylglycine-generating enzyme [EC:1.8.3.7]
D3M96_10260	K03498	trkH, trkG, ktrB;trk system potassium uptake protein
D3M96_10265	K03499	trkA, ktrA;trk system potassium uptake protein
D3M96_10270	K10680	nemA;N-ethylmaleimide reductase [EC:1.-.-.-]
D3M96_10280	K09117	K09117;uncharacterized protein
D3M96_10285	K14162	dnaE2;error-prone DNA polymerase [EC:2.7.7.7]
D3M96_10325	K21703	cbbR, cmpR, ndhR;LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D3M96_10330	K07262	pbpG;serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D3M96_10340	K02556	motA;chemotaxis protein MotA
D3M96_10355	K00023	phbB;acetoacetyl-CoA reductase [EC:1.1.1.36]
D3M96_10365	K16066	ydfG;3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D3M96_10370	K00793	ribE, RIB5;riboflavin synthase [EC:2.5.1.9]
D3M96_10380	K01744	aspA;aspartate ammonia-lyase [EC:4.3.1.1]
D3M96_10385	K11103	dctA;aerobic C4-dicarboxylate transport protein
D3M96_10395	K10126	dctD;two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D3M96_10400	K19338	nac;LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D3M96_10405	K00244	frdA;fumarate reductase flavoprotein subunit [EC:1.3.5.4]
D3M96_10410	K13795	citB, tcuB;citrate/tricarballylate utilization protein
D3M96_10420	K08357	ttrA;tetrathionate reductase subunit A
D3M96_10425	K08359	ttrC;tetrathionate reductase subunit C
D3M96_10430	K08358	ttrB;tetrathionate reductase subunit B
D3M96_10435	K19611	fepA, pfeA, iroN, pirA;ferric enterobactin receptor
D3M96_10450	K18456	E3.5.4.32;8-oxoguanine deaminase [EC:3.5.4.32]
D3M96_10465	K21613	yxeP;uncharacterized hydrolase [EC:3.-.-.-]
D3M96_10475	K08154	emrD;MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D3M96_10495	K17940	pqsH;2-heptyl-3-hydroxy-4(1H)-quinolone synthase [EC:1.14.13.182]
D3M96_10505	K03426	E3.6.1.22, NUDT12, nudC;NAD+ diphosphatase [EC:3.6.1.22]
D3M96_10515	K03547	sbcD, mre11;DNA repair protein SbcD/Mre11
D3M96_10525	K00989	rph;ribonuclease PH [EC:2.7.7.56]
D3M96_10530	K02428	rdgB;XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D3M96_10540	K20712	glnA;3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
D3M96_10545	K02348	elaA;ElaA protein
D3M96_10555	K11076	potG;putrescine transport system ATP-binding protein
D3M96_10560	K02046	cysU;sulfate/thiosulfate transport system permease protein
D3M96_10565	K02012	afuA, fbpA;iron(III) transport system substrate-binding protein
D3M96_10580	K03655	recG;ATP-dependent DNA helicase RecG [EC:3.6.4.12]
D3M96_10590	K04047	dps;starvation-inducible DNA-binding protein
D3M96_10595	K01999	livK;branched-chain amino acid transport system substrate-binding protein
D3M96_10600	K05816	ugpC;sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D3M96_10605	K05815	ugpE;sn-glycerol 3-phosphate transport system permease protein
D3M96_10610	K05814	ugpA;sn-glycerol 3-phosphate transport system permease protein
D3M96_10615	K05813	ugpB;sn-glycerol 3-phosphate transport system substrate-binding protein
D3M96_10620	K00286	proC;pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D3M96_10625	K01999	livK;branched-chain amino acid transport system substrate-binding protein
D3M96_10630	K01997	livH;branched-chain amino acid transport system permease protein
D3M96_10635	K01998	livM;branched-chain amino acid transport system permease protein
D3M96_10640	K01995	livG;branched-chain amino acid transport system ATP-binding protein
D3M96_10645	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_10655	K00799	GST, gst;glutathione S-transferase [EC:2.5.1.18]
D3M96_10665	K00018	hprA;glycerate dehydrogenase [EC:1.1.1.29]
D3M96_10670	K00046	idnO;gluconate 5-dehydrogenase [EC:1.1.1.69]
D3M96_10675	K03472	epd;D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D3M96_10680	K01679	E4.2.1.2B, fumC, FH;fumarate hydratase, class II [EC:4.2.1.2]
D3M96_10685	K21430	yliI;aldose sugar dehydrogenase [EC:1.1.5.-]
D3M96_10695	K08738	CYC;cytochrome c
D3M96_10700	K03449	MFS.CP;MFS transporter, CP family, cyanate transporter
D3M96_10710	K16135	dmlR;LysR family transcriptional regulator, transcriptional activator for dmlA
D3M96_10720	K17686	copA, ctpA, ATP7;P-type Cu+ transporter [EC:7.2.2.8]
D3M96_10740	K21698	aaeR;LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D3M96_10745	K03733	xerC;integrase/recombinase XerC
D3M96_10755	K14588	cueO;blue copper oxidase
D3M96_10760	K08289	purT;phosphoribosylglycinamide formyltransferase 2 [EC:2.1.2.2]
D3M96_10820	K11904	vgrG;type VI secretion system secreted protein VgrG
D3M96_10825	K11907	vasG, clpV;type VI secretion system protein VasG
D3M96_10890	K12262	cybB;cytochrome b561
D3M96_10905	K00537	arsC1, arsC;arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D3M96_10910	K11209	yghU, yfcG;GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D3M96_10920	K19784	chrR, NQR;chromate reductase, NAD(P)H dehydrogenase (quinone)
D3M96_10935	K03424	tatD;TatD DNase family protein [EC:3.1.21.-]
D3M96_10940	K02341	holB;DNA polymerase III subunit delta' [EC:2.7.7.7]
D3M96_10950	K07082	K07082;UPF0755 protein
D3M96_10955	K06980	ygfZ;tRNA-modifying protein YgfZ
D3M96_10960	K00020	mmsB, HIBADH;3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D3M96_10975	K09801	K09801;uncharacterized protein
D3M96_10985	K03664	smpB;SsrA-binding protein
D3M96_10990	K03885	ndh;NADH dehydrogenase [EC:1.6.99.3]
D3M96_11000	K01007	pps, ppsA;pyruvate, water dikinase [EC:2.7.9.2]
D3M96_11005	K09773	ppsR;[pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D3M96_11010	K01471	nylA;6-aminohexanoate-cyclic-dimer hydrolase [EC:3.5.2.12]
D3M96_11015	K03437	spoU;RNA methyltransferase, TrmH family
D3M96_11020	K03470	rnhB;ribonuclease HII [EC:3.1.26.4]
D3M96_11025	K00748	lpxB;lipid-A-disaccharide synthase [EC:2.4.1.182]
D3M96_11030	K00677	lpxA;UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D3M96_11035	K02372	fabZ;3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D3M96_11040	K02536	lpxD;UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D3M96_11045	K06142	hlpA, ompH;outer membrane protein
D3M96_11050	K07277	SAM50, TOB55, bamA;outer membrane protein insertion porin family
D3M96_11055	K11749	rseP;regulator of sigma E protease [EC:3.4.24.-]
D3M96_11060	K00099	dxr;1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D3M96_11065	K00981	E2.7.7.41, CDS1, CDS2, cdsA;phosphatidate cytidylyltransferase [EC:2.7.7.41]
D3M96_11070	K00806	uppS;undecaprenyl diphosphate synthase [EC:2.5.1.31]
D3M96_11075	K02838	frr, MRRF, RRF;ribosome recycling factor
D3M96_11080	K09903	pyrH;uridylate kinase [EC:2.7.4.22]
D3M96_11085	K02357	tsf, TSFM;elongation factor Ts
D3M96_11090	K02967	RP-S2, MRPS2, rpsB;small subunit ribosomal protein S2
D3M96_11095	K01265	map;methionyl aminopeptidase [EC:3.4.11.18]
D3M96_11100	K00990	glnD;[protein-PII] uridylyltransferase [EC:2.7.7.59]
D3M96_11105	K05595	marC;multiple antibiotic resistance protein
D3M96_11120	K00764	purF, PPAT;amidophosphoribosyltransferase [EC:2.4.2.14]
D3M96_11125	K03558	cvpA;membrane protein required for colicin V production
D3M96_11135	K11754	folC;dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D3M96_11140	K00382	DLD, lpd, pdhD;dihydrolipoamide dehydrogenase [EC:1.8.1.4]
D3M96_11145	K00627	DLAT, aceF, pdhC;pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
D3M96_11150	K00163	aceE;pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D3M96_11160	K14987	fixJ;two-component system, LuxR family, response regulator FixJ
D3M96_11165	K01491	folD;methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D3M96_11170	K01414	prlC;oligopeptidase A [EC:3.4.24.70]
D3M96_11175	K07152	SCO1_2;protein SCO1/2
D3M96_11180	K02355	fusA, GFM, EFG;elongation factor G
D3M96_11210	K03474	pdxJ;pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D3M96_11220	K18142	acrF;multidrug efflux pump
D3M96_11225	K03585	acrA, mexA, adeI, smeD, mtrC, cmeA;membrane fusion protein, multidrug efflux system
D3M96_11230	K02041	phnC;phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D3M96_11250	K00626	E2.3.1.9, atoB;acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D3M96_11255	K00626	E2.3.1.9, atoB;acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D3M96_11265	K03417	prpB;methylisocitrate lyase [EC:4.1.3.30]
D3M96_11270	K02521	ilvY;LysR family transcriptional regulator, positive regulator for ilvC
D3M96_11275	K01582	E4.1.1.18, ldcC, cadA;lysine decarboxylase [EC:4.1.1.18]
D3M96_11295	K00942	E2.7.4.8, gmk;guanylate kinase [EC:2.7.4.8]
D3M96_11300	K03060	rpoZ;DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D3M96_11305	K01139	spoT;GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D3M96_11320	K19304	mepM;murein DD-endopeptidase [EC:3.4.24.-]
D3M96_11325	K03771	surA;peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D3M96_11330	K01126	E3.1.4.46, glpQ, ugpQ;glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D3M96_11335	K07115	rlmJ;23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D3M96_11340	K06178	rluB;23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D3M96_11345	K03181	ubiC;chorismate--pyruvate lyase [EC:4.1.3.40]
D3M96_11365	K16053	ybdG, mscM;miniconductance mechanosensitive channel
D3M96_11370	K01755	argH, ASL;argininosuccinate lyase [EC:4.3.2.1]
D3M96_11385	K09471	puuB, ordL;gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D3M96_11395	K03215	rumA;23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D3M96_11400	K06194	nlpD;lipoprotein NlpD
D3M96_11405	K00573	E2.1.1.77, pcm;protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D3M96_11410	K03787	surE;5'-nucleotidase [EC:3.1.3.5]
D3M96_11415	K08591	plsY;acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D3M96_11420	K01409	KAE1, tsaD, QRI7;N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D3M96_11425	K06901	pbuG;putative MFS transporter, AGZA family, xanthine/uracil permease
D3M96_11430	K03671	trxA;thioredoxin 1
D3M96_11455	K01297	ldcA;muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D3M96_11460	K11991	tadA;tRNA(adenine34) deaminase [EC:3.5.4.33]
D3M96_11465	K01990	ABC-2.A;ABC-2 type transport system ATP-binding protein
D3M96_11470	K01992	ABC-2.P;ABC-2 type transport system permease protein
D3M96_11475	K03406	mcp;methyl-accepting chemotaxis protein
D3M96_11485	K21394	yiaM;TRAP-type transport system small permease protein
D3M96_11495	K09471	puuB, ordL;gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D3M96_11505	K03149	thiG;thiazole synthase [EC:2.8.1.10]
D3M96_11515	K09882	cobS;cobaltochelatase CobS [EC:6.6.1.2]
D3M96_11545	K09767	yajQ;cyclic-di-GMP-binding protein
D3M96_11550	K00666	ACSF2;fatty-acyl-CoA synthase [EC:6.2.1.-]
D3M96_11555	K06199	crcB, FEX;fluoride exporter
D3M96_11560	K01951	guaA, GMPS;GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D3M96_11570	K14347	SLC10A7, P7;solute carrier family 10 (sodium/bile acid cotransporter), member 7
D3M96_11585	K01817	trpF;phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D3M96_11590	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_11600	K06173	truA, PUS1;tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D3M96_11610	K00133	asd;aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D3M96_11615	K00052	leuB, IMDH;3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D3M96_11620	K01704	leuD, IPMI-S;3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D3M96_11625	K01703	leuC, IPMI-L;3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D3M96_11640	K14987	fixJ;two-component system, LuxR family, response regulator FixJ
D3M96_11655	K01736	aroC;chorismate synthase [EC:4.2.3.5]
D3M96_11670	K07058	K07058;membrane protein
D3M96_11680	K05539	dusA;tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D3M96_11685	K02204	thrB2;homoserine kinase type II [EC:2.7.1.39]
D3M96_11710	K02283	cpaF, tadA;pilus assembly protein CpaF [EC:7.4.2.8]
D3M96_11715	K02280	cpaC, rcpA;pilus assembly protein CpaC
D3M96_11750	K16088	TC.FEV.OM1, fhuE, fpvA, fptA;outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D3M96_11755	K07165	fecR;transmembrane sensor
D3M96_11760	K03088	rpoE;RNA polymerase sigma-70 factor, ECF subfamily
D3M96_11765	K16165	nagK;fumarylpyruvate hydrolase [EC:3.7.1.20]
D3M96_11770	K01507	ppa;inorganic pyrophosphatase [EC:3.6.1.1]
D3M96_11780	K02496	hemX;uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D3M96_11790	K01749	hemC, HMBS;hydroxymethylbilane synthase [EC:2.5.1.61]
D3M96_11800	K01902	sucD;succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D3M96_11805	K01903	sucC;succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D3M96_11815	K00549	metE;5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D3M96_11820	K03576	metR;LysR family transcriptional regulator, regulator for metE and metH
D3M96_11825	K03565	recX;regulatory protein
D3M96_11835	K07774	tctD;two-component system, OmpR family, response regulator TctD
D3M96_11845	K03762	proP;MFS transporter, MHS family, proline/betaine transporter
D3M96_11850	K03554	rdgC;recombination associated protein RdgC
D3M96_11860	K20034	dmdB;3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D3M96_11865	K20036	dmdD;(methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
D3M96_11875	K14393	actP;cation/acetate symporter
D3M96_11880	K00140	mmsA, iolA, ALDH6A1;malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D3M96_11885	K00609	pyrB, PYR2;aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D3M96_11900	K05366	mrcA;penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
D3M96_11905	K06894	K06894;uncharacterized protein
D3M96_11915	K00459	ncd2, npd;nitronate monooxygenase [EC:1.13.12.16]
D3M96_11920	K02495	hemN, hemZ;oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D3M96_11925	K05559	phaA;multicomponent K+:H+ antiporter subunit A
D3M96_11930	K05560	phaC;multicomponent K+:H+ antiporter subunit C
D3M96_11935	K05561	phaD;multicomponent K+:H+ antiporter subunit D
D3M96_11945	K05563	phaF;multicomponent K+:H+ antiporter subunit F
D3M96_11960	K03549	kup;KUP system potassium uptake protein
D3M96_11965	K07645	qseC;two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D3M96_11975	K03559	exbD;biopolymer transport protein ExbD
D3M96_11980	K03561	exbB;biopolymer transport protein ExbB
D3M96_11990	K02045	cysA;sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D3M96_11995	K02047	cysW;sulfate/thiosulfate transport system permease protein
D3M96_12000	K02046	cysU;sulfate/thiosulfate transport system permease protein
D3M96_12005	K23163	sbp;sulfate/thiosulfate transport system substrate-binding protein
D3M96_12025	K03704	cspA;cold shock protein
D3M96_12050	K03530	hupB;DNA-binding protein HU-beta
D3M96_12055	K02302	cysG;uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D3M96_12065	K19345	nirF;protein NirF
D3M96_12085	K03639	moaA, CNX2;GTP 3',8-cyclase [EC:4.1.99.22]
D3M96_12090	K02302	cysG;uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D3M96_12105	K00375	K00375;GntR family transcriptional regulator / MocR family aminotransferase
D3M96_12110	K01761	E4.4.1.11;methionine-gamma-lyase [EC:4.4.1.11]
D3M96_12115	K03218	rlmB;23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D3M96_12120	K12573	rnr, vacB;ribonuclease R [EC:3.1.13.1]
D3M96_12135	K01580	E4.1.1.15, gadB, gadA, GAD;glutamate decarboxylase [EC:4.1.1.15]
D3M96_12140	K20265	gadC;glutamate:GABA antiporter
D3M96_12170	K07229	yqjH;ferric-chelate reductase (NADPH) [EC:1.16.1.9]
D3M96_12200	K21703	cbbR, cmpR, ndhR;LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D3M96_12205	K02010	afuC, fbpC;iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D3M96_12215	K05306	phnX;phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D3M96_12220	K02012	afuA, fbpA;iron(III) transport system substrate-binding protein
D3M96_12230	K03823	pat;phosphinothricin acetyltransferase [EC:2.3.1.183]
D3M96_12240	K01061	E3.1.1.45;carboxymethylenebutenolidase [EC:3.1.1.45]
D3M96_12245	K09954	K09954;uncharacterized protein
D3M96_12250	K11209	yghU, yfcG;GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D3M96_12260	K06911	K06911;uncharacterized protein
D3M96_12270	K11206	NIT1, ybeM;deaminated glutathione amidase [EC:3.5.1.128]
D3M96_12275	K19577	ydhP;MFS transporter, DHA1 family, inner membrane transport protein
D3M96_12280	K03449	MFS.CP;MFS transporter, CP family, cyanate transporter
D3M96_12290	K05782	benE;benzoate membrane transport protein
D3M96_12300	K07160	pxpA;5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D3M96_12310	K21675	cdhC;caffeine dehydrogenase subunit gamma [EC:1.17.5.2]
D3M96_12315	K00087	ygeS, xdhA;xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D3M96_12325	K01487	E3.5.4.3, guaD;guanine deaminase [EC:3.5.4.3]
D3M96_12335	K07666	qseB;two-component system, OmpR family, response regulator QseB
D3M96_12340	K07653	mprB;two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D3M96_12345	K03086	rpoD;RNA polymerase primary sigma factor
D3M96_12350	K02316	dnaG;DNA primase [EC:2.7.7.101]
D3M96_12355	K02970	RP-S21, MRPS21, rpsU;small subunit ribosomal protein S21
D3M96_12360	K00769	gpt;xanthine phosphoribosyltransferase [EC:2.4.2.22]
D3M96_12365	K01939	purA, ADSS;adenylosuccinate synthase [EC:6.3.4.4]
D3M96_12370	K02502	hisZ;ATP phosphoribosyltransferase regulatory subunit
D3M96_12375	K04087	hflC;membrane protease subunit HflC [EC:3.4.-.-]
D3M96_12380	K04088	hflK;membrane protease subunit HflK [EC:3.4.-.-]
D3M96_12385	K03665	hflX;GTPase
D3M96_12390	K03666	hfq;host factor-I protein
D3M96_12395	K00817	hisC;histidinol-phosphate aminotransferase [EC:2.6.1.9]
D3M96_12400	K03977	engA, der;GTPase
D3M96_12405	K17713	bamB;outer membrane protein assembly factor BamB
D3M96_12415	K01892	HARS, hisS;histidyl-tRNA synthetase [EC:6.1.1.21]
D3M96_12420	K03526	gcpE, ispG;(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D3M96_12430	K06941	rlmN;23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D3M96_12435	K00940	ndk, NME;nucleoside-diphosphate kinase [EC:2.7.4.6]
D3M96_12440	K01873	VARS, valS;valyl-tRNA synthetase [EC:6.1.1.9]
D3M96_12445	K00554	trmD;tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D3M96_12450	K02860	rimM;16S rRNA processing protein RimM
D3M96_12455	K02959	RP-S16, MRPS16, rpsP;small subunit ribosomal protein S16
D3M96_12460	K04085	tusA, sirA;tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D3M96_12465	K01872	AARS, alaS;alanyl-tRNA synthetase [EC:6.1.1.7]
D3M96_12480	K07127	uraH, pucM, hiuH;5-hydroxyisourate hydrolase [EC:3.5.2.17]
D3M96_12510	K05813	ugpB;sn-glycerol 3-phosphate transport system substrate-binding protein
D3M96_12515	K00285	dadA;D-amino-acid dehydrogenase [EC:1.4.5.1]
D3M96_12520	K00523	ascD, ddhD, rfbI;CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D3M96_12530	K02622	parE;topoisomerase IV subunit B [EC:5.6.2.2]
D3M96_12535	K03671	trxA;thioredoxin 1
D3M96_12540	K03628	rho;transcription termination factor Rho
D3M96_12545	K00262	E1.4.1.4, gdhA;glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D3M96_12560	K00982	glnE;[glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D3M96_12565	K09765	queH;epoxyqueuosine reductase [EC:1.17.99.6]
D3M96_12570	K03695	clpB;ATP-dependent Clp protease ATP-binding subunit ClpB
D3M96_12575	K01420	fnr;CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D3M96_12620	K17686	copA, ctpA, ATP7;P-type Cu+ transporter [EC:7.2.2.8]
D3M96_12630	K01637	E4.1.3.1, aceA;isocitrate lyase [EC:4.1.3.1]
D3M96_12635	K06879	queF;7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D3M96_12650	K00995	pgsA, PGS1;CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D3M96_12655	K03703	uvrC;excinuclease ABC subunit C
D3M96_12660	K01207	nagZ;beta-N-acetylhexosaminidase [EC:3.2.1.52]
D3M96_12665	K00997	acpS;holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D3M96_12675	K02614	paaI;acyl-CoA thioesterase [EC:3.1.2.-]
D3M96_12680	K15866	paaG;2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D3M96_12685	K00128	ALDH;aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D3M96_12690	K02613	paaE;ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D3M96_12695	K02612	paaD;ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D3M96_12700	K02611	paaC;ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D3M96_12705	K02610	paaB;ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D3M96_12710	K02609	paaA;ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D3M96_12715	K13288	orn, REX2, REXO2;oligoribonuclease [EC:3.1.-.-]
D3M96_12725	K06949	rsgA, engC;ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D3M96_12735	K02884	RP-L19, MRPL19, rplS;large subunit ribosomal protein L19
D3M96_12750	K03386	PRDX2_4, ahpC;peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
D3M96_12755	K20035	dmdC;3-(methylthio)propanoyl-CoA dehydrogenase [EC:1.3.8.-]
D3M96_12760	K03522	fixB, etfA;electron transfer flavoprotein alpha subunit
D3M96_12765	K03521	fixA, etfB;electron transfer flavoprotein beta subunit
D3M96_12775	K08305	mltB;membrane-bound lytic murein transglycosylase B [EC:4.2.2.-]
D3M96_12780	K12339	cysM;S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D3M96_12785	K02337	dnaE;DNA polymerase III subunit alpha [EC:2.7.7.7]
D3M96_12790	K03274	gmhD, rfaD;ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D3M96_12795	K21344	rfaE1;D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D3M96_12800	K19804	lapB;lipopolysaccharide assembly protein B
D3M96_12810	K05788	ihfB, himD;integration host factor subunit beta
D3M96_12815	K02945	RP-S1, rpsA;small subunit ribosomal protein S1
D3M96_12820	K00945	cmk;CMP/dCMP kinase [EC:2.7.4.25]
D3M96_12825	K00800	aroA;3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D3M96_12830	K04517	tyrA2;prephenate dehydrogenase [EC:1.3.1.12]
D3M96_12835	K14170	pheA;chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D3M96_12840	K00831	serC, PSAT1;phosphoserine aminotransferase [EC:2.6.1.52]
D3M96_12855	K00568	ubiG;2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D3M96_12860	K22292	mupP;N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D3M96_12870	K08167	smvA, qacA, lfrA;MFS transporter, DHA2 family, multidrug resistance protein
D3M96_12885	K16089	TC.FEV.OM2, cirA, cfrA, hmuR;outer membrane receptor for ferrienterochelin and colicins
D3M96_12900	K03781	katE, CAT, catB, srpA;catalase [EC:1.11.1.6]
D3M96_12920	K14260	alaA;alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D3M96_12940	K06895	lysE, argO;L-lysine exporter family protein LysE/ArgO
D3M96_12945	K05596	iciA;LysR family transcriptional regulator, chromosome initiation inhibitor
D3M96_12960	K00799	GST, gst;glutathione S-transferase [EC:2.5.1.18]
D3M96_12970	K07862	sstT;serine/threonine transporter
D3M96_12975	K05834	rhtB;homoserine/homoserine lactone efflux protein
D3M96_12995	K14393	actP;cation/acetate symporter
D3M96_13005	K07647	torS;two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D3M96_13015	K00958	sat, met3;sulfate adenylyltransferase [EC:2.7.7.4]
D3M96_13035	K00797	speE, SRM;spermidine synthase [EC:2.5.1.16]
D3M96_13050	K03776	aer;aerotaxis receptor
D3M96_13070	K01118	acpD, azoR;FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D3M96_13080	K01497	ribA, RIB1;GTP cyclohydrolase II [EC:3.5.4.25]
D3M96_13095	K03688	ubiB, aarF;ubiquinone biosynthesis protein
D3M96_13100	K07054	K07054;uncharacterized protein
D3M96_13110	K04752	glnK;nitrogen regulatory protein P-II 2
D3M96_13115	K03320	amt, AMT, MEP;ammonium transporter, Amt family
D3M96_13125	K01756	purB, ADSL;adenylosuccinate lyase [EC:4.3.2.2]
D3M96_13145	K07090	K07090;uncharacterized protein
D3M96_13150	K00566	mnmA, trmU;tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D3M96_13155	K00104	glcD;glycolate oxidase [EC:1.1.3.15]
D3M96_13160	K01626	E2.5.1.54, aroF, aroG, aroH;3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D3M96_13170	K06200	cstA;carbon starvation protein
D3M96_13175	K02030	ABC.PA.S;polar amino acid transport system substrate-binding protein
D3M96_13180	K02029	ABC.PA.P;polar amino acid transport system permease protein
D3M96_13185	K02029	ABC.PA.P;polar amino acid transport system permease protein
D3M96_13190	K02028	ABC.PA.A;polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D3M96_13195	K01652	E2.2.1.6L, ilvB, ilvG, ilvI;acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D3M96_13200	K00130	betB, gbsA;betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D3M96_13205	K06989	nadX, ASPDH;aspartate dehydrogenase [EC:1.4.1.21]
D3M96_13210	K00059	fabG, OAR1;3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D3M96_13220	K15599	thiX;putative hydroxymethylpyrimidine transport system permease protein
D3M96_13225	K15555	ssuB;sulfonate transport system ATP-binding protein [EC:3.6.3.-]
D3M96_13245	K13641	iclR;IclR family transcriptional regulator, acetate operon repressor
D3M96_13255	K10674	ectD;ectoine hydroxylase [EC:1.14.11.55]
D3M96_13260	K06720	ectC;L-ectoine synthase [EC:4.2.1.108]
D3M96_13265	K00836	ectB, dat;diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D3M96_13270	K06718	ectA;L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D3M96_13275	K15973	mhqR;MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D3M96_13285	K03568	tldD;TldD protein
D3M96_13300	K01256	pepN;aminopeptidase N [EC:3.4.11.2]
D3M96_13305	K03841	FBP, fbp;fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D3M96_13310	K00344	qor, CRYZ;NADPH:quinone reductase [EC:1.6.5.5]
D3M96_13320	K07246	ttuC, dmlA;tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D3M96_13325	K12972	ghrA;glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D3M96_13330	K06915	K06915;uncharacterized protein
D3M96_13340	K01945	purD;phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D3M96_13345	K00228	CPOX, hemF;coproporphyrinogen III oxidase [EC:1.3.3.3]
D3M96_13350	K00969	nadD;nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D3M96_13355	K09710	ybeB;ribosome-associated protein
D3M96_13360	K00783	rlmH;23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D3M96_13365	K06287	maf;septum formation protein
D3M96_13370	K03805	dsbG;thiol:disulfide interchange protein DsbG
D3M96_13385	K03113	EIF1, SUI1;translation initiation factor 1
D3M96_13395	K00042	garR, glxR;2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D3M96_13400	K01800	maiA, GSTZ1;maleylacetoacetate isomerase [EC:5.2.1.2]
D3M96_13405	K03527	ispH, lytB;4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D3M96_13415	K03630	radC;DNA repair protein RadC
D3M96_13420	K02909	RP-L31, rpmE;large subunit ribosomal protein L31
D3M96_13430	K03327	TC.MATE, SLC47A, norM, mdtK, dinF;multidrug resistance protein, MATE family
D3M96_13435	K02000	proV;glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D3M96_13440	K02001	proW;glycine betaine/proline transport system permease protein
D3M96_13455	K07552	bcr, tcaB;MFS transporter, DHA1 family, multidrug resistance protein
D3M96_13460	K02902	RP-L28, MRPL28, rpmB;large subunit ribosomal protein L28
D3M96_13465	K02913	RP-L33, MRPL33, rpmG;large subunit ribosomal protein L33
D3M96_13470	K01869	LARS, leuS;leucyl-tRNA synthetase [EC:6.1.1.4]
D3M96_13485	K00147	proA;glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D3M96_13490	K08973	K08973;putative membrane protein
D3M96_13495	K07444	ypsC;putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D3M96_13505	K04083	hslO;molecular chaperone Hsp33
D3M96_13515	K05589	ftsB;cell division protein FtsB
D3M96_13520	K01689	ENO, eno;enolase [EC:4.2.1.11]
D3M96_13545	K01627	kdsA;2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D3M96_13550	K01937	pyrG, CTPS;CTP synthase [EC:6.3.4.2]
D3M96_13560	K01029	E2.8.3.5B, scoB;3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D3M96_13565	K01028	E2.8.3.5A, scoA;3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D3M96_13575	K00311	ETFDH;electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D3M96_13590	K01895	ACSS, acs;acetyl-CoA synthetase [EC:6.2.1.1]
D3M96_13600	K19303	mepH;murein DD-endopeptidase [EC:3.4.-.-]
D3M96_13610	K13634	cysB;LysR family transcriptional regulator, cys regulon transcriptional activator
D3M96_13615	K00140	mmsA, iolA, ALDH6A1;malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D3M96_13620	K21959	ftsR;LysR family transcriptional regulator, cell division regulator
D3M96_13625	K02014	TC.FEV.OM;iron complex outermembrane recepter protein
D3M96_13635	K02015	ABC.FEV.P;iron complex transport system permease protein
D3M96_13645	K20147	ntaA, nmoA;nitrilotriacetate monooxygenase [EC:1.14.14.10]
D3M96_13660	K01255	CARP, pepA;leucyl aminopeptidase [EC:3.4.11.1]
D3M96_13670	K19416	yccA;modulator of FtsH protease
D3M96_13680	K00640	cysE;serine O-acetyltransferase [EC:2.3.1.30]
D3M96_13685	K05786	rarD;chloramphenicol-sensitive protein RarD
D3M96_13695	K03584	recO;DNA repair protein RecO (recombination protein O)
D3M96_13700	K03595	era, ERAL1;GTPase
D3M96_13705	K03685	rnc, DROSHA, RNT1;ribonuclease III [EC:3.1.26.3]
D3M96_13710	K03100	lepB;signal peptidase I [EC:3.4.21.89]
D3M96_13715	K03596	lepA;GTP-binding protein LepA
D3M96_13720	K04771	degP, htrA;serine protease Do [EC:3.4.21.107]
D3M96_13735	K03088	rpoE;RNA polymerase sigma-70 factor, ECF subfamily
D3M96_13745	K09458	fabF, OXSM, CEM1;3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D3M96_13750	K02078	acpP;acyl carrier protein
D3M96_13755	K00059	fabG, OAR1;3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D3M96_13760	K00645	fabD, MCAT, MCT1;[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D3M96_13765	K00648	fabH;3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D3M96_13770	K03621	plsX;phosphate acyltransferase [EC:2.3.1.274]
D3M96_13775	K02911	RP-L32, MRPL32, rpmF;large subunit ribosomal protein L32
D3M96_13780	K07040	K07040;uncharacterized protein
D3M96_13785	K06287	maf;septum formation protein
D3M96_13790	K07056	rsmI;16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D3M96_13795	K11066	E3.5.1.28D, amiD;N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D3M96_13800	K17247	msrQ;methionine sulfoxide reductase heme-binding subunit
D3M96_13805	K07147	msrP;methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D3M96_13810	K01091	gph;phosphoglycolate phosphatase [EC:3.1.3.18]
D3M96_13815	K06179	rluC;23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D3M96_13820	K08300	rne;ribonuclease E [EC:3.1.26.12]
D3M96_13825	K01963	accD;acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D3M96_13830	K01695	trpA;tryptophan synthase alpha chain [EC:4.2.1.20]
D3M96_13835	K01696	trpB;tryptophan synthase beta chain [EC:4.2.1.20]
D3M96_13850	K00763	pncB, NAPRT1;nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D3M96_13865	K03616	rnfB;Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.2.1.2]
D3M96_13870	K10773	NTH;endonuclease III [EC:4.2.99.18]
D3M96_13875	K02056	ABC.SS.A;simple sugar transport system ATP-binding protein [EC:3.6.3.17]
D3M96_13880	K07275	ompW;outer membrane protein
D3M96_13885	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_13890	K01995	livG;branched-chain amino acid transport system ATP-binding protein
D3M96_13905	K07305	msrB;peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D3M96_13910	K06190	ispZ;intracellular septation protein
D3M96_13920	K03769	ppiC;peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D3M96_13925	K01972	E6.5.1.2, ligA, ligB;DNA ligase (NAD+) [EC:6.5.1.2]
D3M96_13935	K03529	smc;chromosome segregation protein
D3M96_13940	K08227	lplT;MFS transporter, LPLT family, lysophospholipid transporter
D3M96_13945	K21929	udg;uracil-DNA glycosylase [EC:3.2.2.27]
D3M96_13950	K14742	tsaB;tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D3M96_13955	K07659	ompR;two-component system, OmpR family, phosphate regulon response regulator OmpR
D3M96_13960	K07638	envZ;two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D3M96_13965	K01770	ispF;2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D3M96_13970	K00991	ispD;2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D3M96_13975	K03723	mfd;transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
D3M96_13980	K01079	serB, PSPH;phosphoserine phosphatase [EC:3.1.3.3]
D3M96_13985	K00459	ncd2, npd;nitronate monooxygenase [EC:1.13.12.16]
D3M96_13995	K00343	nuoN;NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D3M96_14005	K00341	nuoL;NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D3M96_14010	K00340	nuoK;NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D3M96_14020	K00338	nuoI;NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D3M96_14025	K00337	nuoH;NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D3M96_14030	K00336	nuoG;NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D3M96_14035	K00335	nuoF;NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D3M96_14040	K00334	nuoE;NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D3M96_14045	K00333	nuoD;NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D3M96_14050	K00332	nuoC;NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D3M96_14055	K00331	nuoB;NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D3M96_14060	K00330	nuoA;NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D3M96_14080	K03075	secG;preprotein translocase subunit SecG
D3M96_14085	K01803	TPI, tpiA;triosephosphate isomerase (TIM) [EC:5.3.1.1]
D3M96_14090	K13955	yogA;zinc-binding alcohol dehydrogenase/oxidoreductase
D3M96_14105	K00962	pnp, PNPT1;polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D3M96_14110	K02956	RP-S15, MRPS15, rpsO;small subunit ribosomal protein S15
D3M96_14115	K17103	CHO1, pssA;CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D3M96_14120	K00053	ilvC;ketol-acid reductoisomerase [EC:1.1.1.86]
D3M96_14125	K01653	E2.2.1.6S, ilvH, ilvN;acetolactate synthase I/III small subunit [EC:2.2.1.6]
D3M96_14130	K01652	E2.2.1.6L, ilvB, ilvG, ilvI;acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D3M96_14140	K09861	K09861;uncharacterized protein
D3M96_14145	K00019	E1.1.1.30, bdh;3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D3M96_14290	K04773	sppA;protease IV [EC:3.4.21.-]
D3M96_14400	K03111	ssb;single-strand DNA-binding protein
D3M96_14490	K01875	SARS, serS;seryl-tRNA synthetase [EC:6.1.1.11]
D3M96_14495	K07478	ycaJ;putative ATPase
D3M96_14500	K03634	lolA;outer membrane lipoprotein carrier protein
D3M96_14505	K03466	ftsK, spoIIIE;DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D3M96_14510	K00384	trxB, TRR;thioredoxin reductase (NADPH) [EC:1.8.1.9]
D3M96_14530	K03762	proP;MFS transporter, MHS family, proline/betaine transporter
D3M96_14550	K03929	pnbA;para-nitrobenzyl esterase [EC:3.1.1.-]
D3M96_14555	K16047	hsaA;3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D3M96_14560	K00031	IDH1, IDH2, icd;isocitrate dehydrogenase [EC:1.1.1.42]
D3M96_14580	K03798	ftsH, hflB;cell division protease FtsH [EC:3.4.24.-]
D3M96_14605	K07263	pqqL;zinc protease [EC:3.4.24.-]
D3M96_14610	K03686	dnaJ;molecular chaperone DnaJ
D3M96_14615	K04043	dnaK, HSPA9;molecular chaperone DnaK
D3M96_14620	K03687	GRPE;molecular chaperone GrpE
D3M96_14625	K01772	hemH, FECH;protoporphyrin/coproporphyrin ferrochelatase [EC:4.99.1.1 4.99.1.9]
D3M96_14630	K03705	hrcA;heat-inducible transcriptional repressor
D3M96_14635	K00858	ppnK, NADK;NAD+ kinase [EC:2.7.1.23]
D3M96_14640	K03631	recN;DNA repair protein RecN (Recombination protein N)
D3M96_14645	K03711	fur, zur, furB;Fur family transcriptional regulator, ferric uptake regulator
D3M96_14650	K06186	bamE, smpA;outer membrane protein assembly factor BamE
D3M96_14655	K00215	dapB;4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D3M96_14665	K00075	murB;UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D3M96_14695	K16088	TC.FEV.OM1, fhuE, fpvA, fptA;outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D3M96_14700	K07552	bcr, tcaB;MFS transporter, DHA1 family, multidrug resistance protein
D3M96_14715	K07017	K07017;uncharacterized protein
D3M96_14725	K00135	gabD;succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D3M96_14730	K13821	putA;RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D3M96_14735	K03719	lrp;Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D3M96_14745	K01750	E4.3.1.12, ocd;ornithine cyclodeaminase [EC:4.3.1.12]
D3M96_14750	K08172	shiA;MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D3M96_14755	K05591	dbpA;ATP-independent RNA helicase DbpA [EC:3.6.4.13]
D3M96_14770	K05817	hcaR;LysR family transcriptional regulator, hca operon transcriptional activator
D3M96_14775	K05708	hcaE, hcaA1;3-phenylpropionate/trans-cinnamate dioxygenase subunit alpha [EC:1.14.12.19]
D3M96_14780	K05709	hcaF, hcaA2;3-phenylpropionate/trans-cinnamate dioxygenase subunit beta [EC:1.14.12.19]
D3M96_14785	K05710	hcaC;3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D3M96_14790	K05711	hcaB;2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase [EC:1.3.1.87]
D3M96_14795	K00529	hcaD;3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D3M96_14805	K05714	mhpC;2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D3M96_14815	K04073	mhpF;acetaldehyde dehydrogenase [EC:1.2.1.10]
D3M96_14820	K01666	mhpE;4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D3M96_14825	K05819	mhpT;MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter
D3M96_14830	K01810	GPI, pgi;glucose-6-phosphate isomerase [EC:5.3.1.9]
D3M96_14845	K02433	gatA, QRSL1;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D3M96_14880	K00626	E2.3.1.9, atoB;acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D3M96_14885	K00023	phbB;acetoacetyl-CoA reductase [EC:1.1.1.36]
D3M96_14895	K01992	ABC-2.P;ABC-2 type transport system permease protein
D3M96_14900	K13926	rbbA;ribosome-dependent ATPase
D3M96_14905	K01993	ABC-2.TX;HlyD family secretion protein
D3M96_14910	K18139	oprM, emhC, ttgC, cusC, adeK, smeF, mtrE, cmeC, gesC;outer membrane protein, multidrug efflux system
D3M96_14915	K03821	phbC, phaC;polyhydroxyalkanoate synthase subunit PhaC [EC:2.3.1.-]
D3M96_14925	K09125	K09125;uncharacterized protein
D3M96_14930	K06920	queC;7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D3M96_14935	K00600	glyA, SHMT;glycine hydroxymethyltransferase [EC:2.1.2.1]
D3M96_14940	K00831	serC, PSAT1;phosphoserine aminotransferase [EC:2.6.1.52]
D3M96_14950	K00600	glyA, SHMT;glycine hydroxymethyltransferase [EC:2.1.2.1]
D3M96_14965	K01956	carA, CPA1;carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D3M96_14970	K00868	pdxK, pdxY;pyridoxine kinase [EC:2.7.1.35]
D3M96_14980	K13639	soxR;MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D3M96_14995	K18138	acrB, mexB, adeJ, smeE, mtrD, cmeB;multidrug efflux pump
D3M96_15015	K01999	livK;branched-chain amino acid transport system substrate-binding protein
D3M96_15040	K00404	ccoN;cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
D3M96_15055	K21699	bauR;LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D3M96_15060	K00822	E2.6.1.18;beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D3M96_15065	K01776	murI;glutamate racemase [EC:5.1.1.3]
D3M96_15100	K01114	plc;phospholipase C [EC:3.1.4.3]
D3M96_15110	K02454	gspE;general secretion pathway protein E [EC:7.4.2.8]
D3M96_15140	K02459	gspJ;general secretion pathway protein J
D3M96_15155	K02456	gspG;general secretion pathway protein G
D3M96_15165	K00088	IMPDH, guaB;IMP dehydrogenase [EC:1.1.1.205]
D3M96_15195	K08311	nudH;putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D3M96_15200	K00684	aat;leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D3M96_15205	K21420	bpt;leucyl-tRNA---protein transferase [EC:2.3.2.29]
D3M96_15210	K00254	DHODH, pyrD;dihydroorotate dehydrogenase [EC:1.3.5.2]
D3M96_15220	K13641	iclR;IclR family transcriptional regulator, acetate operon repressor
D3M96_15240	K11927	rhlE;ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
D3M96_15260	K07019	K07019;uncharacterized protein
D3M96_15265	K01423	bepA;beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D3M96_15285	K03185	ubiH;2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D3M96_15290	K05540	dusB;tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D3M96_15295	K03557	fis;Fis family transcriptional regulator, factor for inversion stimulation protein
D3M96_15300	K00602	purH;phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D3M96_15305	K01159	ruvC;crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
D3M96_15310	K03550	ruvA;holliday junction DNA helicase RuvA [EC:3.6.4.12]
D3M96_15315	K22589	thadh;threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D3M96_15320	K03551	ruvB;holliday junction DNA helicase RuvB [EC:3.6.4.12]
D3M96_15330	K01465	URA4, pyrC;dihydroorotase [EC:3.5.2.3]
D3M96_15340	K01669	phrB;deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D3M96_15360	K07484	K07484;transposase
D3M96_15370	K07493	K07493;putative transposase
D3M96_15435	K07112	K07112;uncharacterized protein
D3M96_15445	K07304	msrA;peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D3M96_15455	K13292	lgt, umpA;phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D3M96_15490	K11070	potC;spermidine/putrescine transport system permease protein
D3M96_15495	K02010	afuC, fbpC;iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D3M96_15500	K02012	afuA, fbpA;iron(III) transport system substrate-binding protein
D3M96_15505	K00042	garR, glxR;2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D3M96_15515	K07774	tctD;two-component system, OmpR family, response regulator TctD
D3M96_15520	K08311	nudH;putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D3M96_15525	K01881	PARS, proS;prolyl-tRNA synthetase [EC:6.1.1.15]
D3M96_15530	K07107	ybgC;acyl-CoA thioester hydrolase [EC:3.1.2.-]
D3M96_15535	K03562	tolQ;biopolymer transport protein TolQ
D3M96_15540	K03560	tolR;biopolymer transport protein TolR
D3M96_15550	K03641	tolB;TolB protein
D3M96_15555	K03640	pal;peptidoglycan-associated lipoprotein
D3M96_15580	K03327	TC.MATE, SLC47A, norM, mdtK, dinF;multidrug resistance protein, MATE family
D3M96_15585	K02058	ABC.SS.S;simple sugar transport system substrate-binding protein
D3M96_15590	K02057	ABC.SS.P;simple sugar transport system permease protein
D3M96_15595	K02057	ABC.SS.P;simple sugar transport system permease protein
D3M96_15600	K10441	rbsA;ribose transport system ATP-binding protein [EC:3.6.3.17]
D3M96_15610	K03340	dapdh;diaminopimelate dehydrogenase [EC:1.4.1.16]
D3M96_15615	K11250	leuE;leucine efflux protein
D3M96_15620	K18118	aarC, cat1;succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D3M96_15635	K18552	cmlA, cmlB, floR;MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D3M96_15650	K03387	ahpF;alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]
D3M96_15655	K03386	PRDX2_4, ahpC;peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
D3M96_15660	K14267	dapC;N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D3M96_15670	K00390	cysH;phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D3M96_15675	K00957	cysD;sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D3M96_15680	K00956	cysN;sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D3M96_15685	K11735	gabP;GABA permease
D3M96_15690	K00135	gabD;succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D3M96_15695	K09471	puuB, ordL;gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D3M96_15705	K17850	ampR;LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D3M96_15710	K00925	ackA;acetate kinase [EC:2.7.2.1]
D3M96_15730	K06911	K06911;uncharacterized protein
D3M96_15750	K04078	groES, HSPE1;chaperonin GroES
D3M96_15755	K04077	groEL, HSPD1;chaperonin GroEL
D3M96_15760	K00901	dgkA, DGK;diacylglycerol kinase (ATP) [EC:2.7.1.107]
D3M96_15765	K01591	pyrF;orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D3M96_15775	K18702	uctC;CoA:oxalate CoA-transferase [EC:2.8.3.19]
D3M96_15790	K03743	pncC;nicotinamide-nucleotide amidase [EC:3.5.1.42]
D3M96_15795	K01095	pgpA;phosphatidylglycerophosphatase A [EC:3.1.3.27]
D3M96_15800	K00946	thiL;thiamine-monophosphate kinase [EC:2.7.4.16]
D3M96_15805	K03625	nusB;transcription antitermination protein NusB
D3M96_15810	K00794	ribH, RIB4;6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D3M96_15815	K14652	ribBA;3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D3M96_15830	K03110	ftsY;fused signal recognition particle receptor
D3M96_15835	K08316	rsmD;16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D3M96_15840	K00954	E2.7.7.3A, coaD, kdtB;pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D3M96_15890	K13995	nicF;maleamate amidohydrolase [EC:3.5.1.107]
D3M96_15895	K18028	nicX;2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D3M96_15900	K15357	nicD;N-formylmaleamate deformylase [EC:3.5.1.106]
D3M96_15905	K18030	nicB;nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D3M96_15910	K18029	nicA;nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D3M96_15915	K18030	nicB;nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D3M96_15925	K01996	livF;branched-chain amino acid transport system ATP-binding protein
D3M96_15930	K01995	livG;branched-chain amino acid transport system ATP-binding protein
D3M96_15940	K01999	livK;branched-chain amino acid transport system substrate-binding protein
D3M96_15950	K13069	E2.7.7.65;diguanylate cyclase [EC:2.7.7.65]
D3M96_15970	K07493	K07493;putative transposase
D3M96_15980	K00784	rnz;ribonuclease Z [EC:3.1.26.11]
D3M96_15985	K03710	K03710;GntR family transcriptional regulator
D3M96_15995	K06132	clsC;cardiolipin synthase C [EC:2.7.8.-]
D3M96_16010	K07402	xdhC;xanthine dehydrogenase accessory factor
D3M96_16015	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_16025	K21675	cdhC;caffeine dehydrogenase subunit gamma [EC:1.17.5.2]
D3M96_16030	K19185	kdhA;6-hydroxypseudooxynicotine dehydrogenase subunit alpha [EC:1.5.99.14]
D3M96_16035	K21673	cdhA;caffeine dehydrogenase subunit alpha [EC:1.17.5.2]
D3M96_16045	K14578	nahAb, nagAb, ndoA, nbzAb, dntAb;naphthalene 1,2-dioxygenase ferredoxin component
D3M96_16055	K18242	nagG;salicylate 5-hydroxylase large subunit [EC:1.14.13.172]
D3M96_16070	K13995	nicF;maleamate amidohydrolase [EC:3.5.1.107]
D3M96_16075	K18028	nicX;2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D3M96_16080	K15357	nicD;N-formylmaleamate deformylase [EC:3.5.1.106]
D3M96_16095	K02013	ABC.FEV.A;iron complex transport system ATP-binding protein [EC:7.2.2.-]
D3M96_16100	K02015	ABC.FEV.P;iron complex transport system permease protein
D3M96_16115	K02106	atoE;short-chain fatty acids transporter
D3M96_16130	K02342	dnaQ;DNA polymerase III subunit epsilon [EC:2.7.7.7]
D3M96_16135	K18138	acrB, mexB, adeJ, smeE, mtrD, cmeB;multidrug efflux pump
D3M96_16140	K03585	acrA, mexA, adeI, smeD, mtrC, cmeA;membrane fusion protein, multidrug efflux system
D3M96_16145	K03469	rnhA, RNASEH1;ribonuclease HI [EC:3.1.26.4]
D3M96_16155	K01069	gloB, gloC, HAGH;hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D3M96_16160	K08307	mltD, dniR;membrane-bound lytic murein transglycosylase D [EC:4.2.2.-]
D3M96_16165	K00208	fabI;enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D3M96_16170	K10126	dctD;two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D3M96_16180	K11103	dctA;aerobic C4-dicarboxylate transport protein
D3M96_16190	K07146	K07146;UPF0176 protein
D3M96_16225	K09181	yfiQ;acetyltransferase
D3M96_16235	K19745	acuI;acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D3M96_16240	K18702	uctC;CoA:oxalate CoA-transferase [EC:2.8.3.19]
D3M96_16245	K20036	dmdD;(methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
D3M96_16315	K00537	arsC1, arsC;arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D3M96_16320	K11811	arsH;arsenical resistance protein ArsH
D3M96_16325	K07666	qseB;two-component system, OmpR family, response regulator QseB
D3M96_16330	K07645	qseC;two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D3M96_16375	K03199	virB4, lvhB4;type IV secretion system protein VirB4 [EC:7.4.2.8]
D3M96_16405	K03203	virB8, lvhB8;type IV secretion system protein VirB8
D3M96_16415	K03195	virB10, lvhB10;type IV secretion system protein VirB10
D3M96_16420	K03196	virB11, lvhB11;type IV secretion system protein VirB11 [EC:7.4.2.8]
D3M96_16450	K06915	K06915;uncharacterized protein
D3M96_16515	K03733	xerC;integrase/recombinase XerC
D3M96_16525	K03111	ssb;single-strand DNA-binding protein
D3M96_16560	K03502	umuC;DNA polymerase V
D3M96_16565	K03503	umuD;DNA polymerase V [EC:3.4.21.-]
D3M96_16595	K11752	ribD;diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D3M96_16600	K07738	nrdR;transcriptional repressor NrdR
D3M96_16605	K00600	glyA, SHMT;glycine hydroxymethyltransferase [EC:2.1.2.1]
D3M96_16610	K06910	K06910;uncharacterized protein
D3M96_16615	K01866	YARS, tyrS;tyrosyl-tRNA synthetase [EC:6.1.1.1]
D3M96_16625	K09001	anmK;anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D3M96_16630	K15724	erpA;iron-sulfur cluster insertion protein
D3M96_16640	K00145	argC;N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D3M96_16645	K02996	RP-S9, MRPS9, rpsI;small subunit ribosomal protein S9
D3M96_16650	K02871	RP-L13, MRPL13, rplM;large subunit ribosomal protein L13
D3M96_16660	K03592	pmbA;PmbA protein
D3M96_16665	K09889	yjgA;ribosome-associated protein
D3M96_16680	K09181	yfiQ;acetyltransferase
D3M96_16690	K01531	mgtA, mgtB;P-type Mg2+ transporter [EC:7.2.2.14]
D3M96_16715	K01885	EARS, gltX;glutamyl-tRNA synthetase [EC:6.1.1.17]
D3M96_16745	K02221	yggT;YggT family protein
D3M96_16750	K10778	ada;AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D3M96_16755	K06077	slyB;outer membrane lipoprotein SlyB
D3M96_16770	K02687	prmA;ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D3M96_16775	K01961	accC;acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D3M96_16780	K02160	accB, bccP;acetyl-CoA carboxylase biotin carboxyl carrier protein
D3M96_16785	K03786	aroQ, qutE;3-dehydroquinate dehydratase II [EC:4.2.1.10]
D3M96_16795	K02558	mpl;UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D3M96_16800	K07000	K07000;uncharacterized protein
D3M96_16815	K00014	aroE;shikimate dehydrogenase [EC:1.1.1.25]
D3M96_16820	K03814	mtgA;monofunctional glycosyltransferase [EC:2.4.1.129]
D3M96_16830	K01525	apaH;bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D3M96_16835	K00655	plsC;1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D3M96_16840	K07447	ruvX;putative holliday junction resolvase [EC:3.1.-.-]
D3M96_16845	K07735	algH;putative transcriptional regulator
D3M96_16860	K00788	thiE;thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D3M96_16865	K01845	hemL;glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D3M96_16880	K00620	argJ;glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D3M96_16895	K02888	RP-L21, MRPL21, rplU;large subunit ribosomal protein L21
D3M96_16900	K02899	RP-L27, MRPL27, rpmA;large subunit ribosomal protein L27
D3M96_16905	K03979	obgE, cgtA, MTG2;GTPase [EC:3.6.5.-]
D3M96_16910	K00931	proB;glutamate 5-kinase [EC:2.7.2.11]
D3M96_16915	K00285	dadA;D-amino-acid dehydrogenase [EC:1.4.5.1]
D3M96_16935	K03147	thiC;phosphomethylpyrimidine synthase [EC:4.1.99.17]
D3M96_16940	K07493	K07493;putative transposase
D3M96_16960	K09972	aapP, bztD;general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D3M96_16965	K09971	aapM, bztC;general L-amino acid transport system permease protein
D3M96_16970	K09970	aapQ, bztB;general L-amino acid transport system permease protein
D3M96_16975	K09969	aapJ, bztA;general L-amino acid transport system substrate-binding protein
D3M96_16980	K09812	ftsE;cell division transport system ATP-binding protein
D3M96_16990	K03575	mutY;A/G-specific adenine glycosylase [EC:3.2.2.31]
D3M96_16995	K05837	rodA, mrdB;rod shape determining protein RodA
D3M96_17000	K05515	mrdA;penicillin-binding protein 2 [EC:3.4.16.4]
D3M96_17010	K03570	mreC;rod shape-determining protein MreC
D3M96_17015	K03569	mreB;rod shape-determining protein MreB and related proteins
D3M96_17020	K02435	gatC, GATC;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D3M96_17025	K02433	gatA, QRSL1;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D3M96_17030	K02434	gatB, PET112;aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D3M96_17035	K00762	pyrE;orotate phosphoribosyltransferase [EC:2.4.2.10]
D3M96_17040	K16135	dmlR;LysR family transcriptional regulator, transcriptional activator for dmlA
D3M96_17045	K15977	K15977;putative oxidoreductase
D3M96_17050	K15777	DOPA;4,5-DOPA dioxygenase extradiol [EC:1.13.11.-]
D3M96_17075	K20035	dmdC;3-(methylthio)propanoyl-CoA dehydrogenase [EC:1.3.8.-]
D3M96_17080	K08153	blt;MFS transporter, DHA1 family, multidrug resistance protein
D3M96_17085	K09181	yfiQ;acetyltransferase
D3M96_17095	K04561	norB;nitric oxide reductase subunit B [EC:1.7.2.5]
D3M96_17100	K12266	norR;anaerobic nitric oxide reductase transcription regulator
D3M96_17120	K21961	ethR, etaR;TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D3M96_17125	K10209	crtN;4,4'-diapophytoene desaturase [EC:1.3.8.2]
D3M96_17160	K07071	K07071;uncharacterized protein
D3M96_17165	K03312	gltS;glutamate:Na+ symporter, ESS family
D3M96_17170	K02523	ispB;octaprenyl-diphosphate synthase [EC:2.5.1.90]
D3M96_17180	K08320	nudG;(d)CTP diphosphatase [EC:3.6.1.65]
D3M96_17185	K00797	speE, SRM;spermidine synthase [EC:2.5.1.16]
D3M96_17195	K07789	mdtC;multidrug efflux pump
D3M96_17200	K07788	mdtB;multidrug efflux pump
D3M96_17205	K07799	mdtA;membrane fusion protein, multidrug efflux system
D3M96_17210	K18778	zapD;cell division protein ZapD
D3M96_17215	K00859	coaE;dephospho-CoA kinase [EC:2.7.1.24]
D3M96_17225	K07689	uvrY, gacA, varA;two-component system, NarL family, invasion response regulator UvrY
D3M96_17230	K01918	panC;pantoate--beta-alanine ligase [EC:6.3.2.1]
D3M96_17235	K05896	scpA;segregation and condensation protein A
D3M96_17270	K00548	metH, MTR;5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D3M96_17275	K16092	btuB;vitamin B12 transporter
D3M96_17280	K06858	btuF;vitamin B12 transport system substrate-binding protein
D3M96_17285	K16088	TC.FEV.OM1, fhuE, fpvA, fptA;outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D3M96_17295	K03088	rpoE;RNA polymerase sigma-70 factor, ECF subfamily
D3M96_17310	K03149	thiG;thiazole synthase [EC:2.8.1.10]
D3M96_17315	K00941	thiD;hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D3M96_17320	K01243	mtnN, mtn, pfs;adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D3M96_17325	K00573	E2.1.1.77, pcm;protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D3M96_17330	K12340	tolC;outer membrane protein
D3M96_17335	K21345	rfaE2;D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D3M96_17345	K03688	ubiB, aarF;ubiquinone biosynthesis protein
D3M96_17360	K03183	ubiE;demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D3M96_17365	K07657	phoB;two-component system, OmpR family, phosphate regulon response regulator PhoB
D3M96_17370	K07636	phoR;two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D3M96_17380	K06351	kipI;inhibitor of KinA
D3M96_17385	K06350	kipA;antagonist of KipI
D3M96_17390	K01754	E4.3.1.19, ilvA, tdcB;threonine dehydratase [EC:4.3.1.19]
D3M96_17420	K00759	APRT, apt;adenine phosphoribosyltransferase [EC:2.4.2.7]
D3M96_17425	K16012	cydC;ATP-binding cassette, subfamily C, bacterial CydC
D3M96_17430	K16013	cydD;ATP-binding cassette, subfamily C, bacterial CydD
D3M96_17435	K00424	cydX;cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D3M96_17440	K00426	cydB;cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D3M96_17445	K00425	cydA;cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D3M96_17455	K06041	kdsD, kpsF;arabinose-5-phosphate isomerase [EC:5.3.1.13]
D3M96_17460	K03270	kdsC;3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D3M96_17475	K06861	lptB;lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
D3M96_17485	K02806	PTS-Ntr-EIIA, ptsN;PTS system, nitrogen regulatory IIA component [EC:2.7.1.-]
D3M96_17490	K06023	hprK, ptsK;HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D3M96_17495	K06958	rapZ;RNase adapter protein RapZ
D3M96_17500	K03642	rlpA;rare lipoprotein A
D3M96_17505	K07056	rsmI;16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D3M96_17510	K07460	yraN;putative endonuclease
D3M96_17515	K03271	gmhA, lpcA;D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D3M96_17530	K00930	argB;acetylglutamate kinase [EC:2.7.2.8]
D3M96_17540	K03148	thiF;sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D3M96_17545	K03797	E3.4.21.102, prc, ctpA;carboxyl-terminal processing protease [EC:3.4.21.102]
D3M96_17550	K22719	envC;murein hydrolase activator
D3M96_17555	K01834	PGAM, gpmA;2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D3M96_17565	K03676	grxC, GLRX, GLRX2;glutaredoxin 3
D3M96_17570	K03071	secB;preprotein translocase subunit SecB
D3M96_17575	K00057	gpsA;glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D3M96_17585	K03216	trmL, cspR;tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D3M96_17595	K02169	bioC;malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D3M96_17605	K07714	atoC;two-component system, NtrC family, response regulator AtoC
D3M96_17620	K03500	rsmB, sun;16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D3M96_17625	K14441	rimO;ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D3M96_17635	K01784	galE, GALE;UDP-glucose 4-epimerase [EC:5.1.3.2]
D3M96_17650	K00135	gabD;succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D3M96_17655	K02510	hpaI, hpcH;4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D3M96_17670	K10831	tauB;taurine transport system ATP-binding protein [EC:7.6.2.7]
D3M96_17675	K02050	ABC.SN.P;NitT/TauT family transport system permease protein
D3M96_17700	K17716	capD;UDP-glucose 4-epimerase [EC:5.1.3.2]
D3M96_17710	K13019	wbpI, wlbD;UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D3M96_17725	K02851	wecA, tagO, rfe;UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D3M96_17740	K02847	waaL, rfaL;O-antigen ligase [EC:2.4.1.-]
D3M96_17745	K01710	E4.2.1.46, rfbB, rffG;dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D3M96_17750	K00973	E2.7.7.24, rfbA, rffH;glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D3M96_17755	K01790	rfbC, rmlC;dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D3M96_17765	K02114	ATPF1E, atpC;F-type H+-transporting ATPase subunit epsilon
D3M96_17770	K02112	ATPF1B, atpD;F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D3M96_17775	K02115	ATPF1G, atpG;F-type H+-transporting ATPase subunit gamma
D3M96_17780	K02111	ATPF1A, atpA;F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D3M96_17785	K02113	ATPF1D, atpH;F-type H+-transporting ATPase subunit delta
D3M96_17790	K02109	ATPF0B, atpF;F-type H+-transporting ATPase subunit b
D3M96_17795	K02110	ATPF0C, atpE;F-type H+-transporting ATPase subunit c
D3M96_17800	K02108	ATPF0A, atpB;F-type H+-transporting ATPase subunit a
D3M96_17810	K01692	paaF, echA;enoyl-CoA hydratase [EC:4.2.1.17]
D3M96_17825	K14058	ttcA;tRNA 2-thiocytidine biosynthesis protein TtcA
D3M96_17830	K03186	ubiX, bsdB, PAD1;flavin prenyltransferase [EC:2.5.1.129]
D3M96_17835	K07390	grxD, GLRX5;monothiol glutaredoxin
D3M96_17840	K02493	hemK, prmC, HEMK;release factor glutamine methyltransferase [EC:2.1.1.297]
D3M96_17845	K02835	prfA, MTRF1, MRF1;peptide chain release factor 1
D3M96_17850	K02492	hemA;glutamyl-tRNA reductase [EC:1.2.1.70]
D3M96_17935	K13590	dgcB;diguanylate cyclase [EC:2.7.7.65]
D3M96_17940	K02528	ksgA;16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D3M96_17945	K02687	prmA;ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D3M96_17950	K04565	SOD1;superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
D3M96_17960	K07120	K07120;uncharacterized protein
D3M96_17980	K07644	cusS, copS, silS;two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D3M96_17985	K07774	tctD;two-component system, OmpR family, response regulator TctD
D3M96_17995	K03762	proP;MFS transporter, MHS family, proline/betaine transporter
D3M96_18000	K01501	E3.5.5.1;nitrilase [EC:3.5.5.1]
D3M96_18020	K10831	tauB;taurine transport system ATP-binding protein [EC:7.6.2.7]
D3M96_18045	K00123	fdoG, fdhF, fdwA;formate dehydrogenase major subunit [EC:1.17.1.9]
D3M96_18050	K00123	fdoG, fdhF, fdwA;formate dehydrogenase major subunit [EC:1.17.1.9]
D3M96_18055	K00124	fdoH, fdsB;formate dehydrogenase iron-sulfur subunit
D3M96_18060	K00127	fdoI, fdsG;formate dehydrogenase subunit gamma
D3M96_18065	K02380	fdhE;FdhE protein
D3M96_18070	K01042	selA;L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D3M96_18075	K03833	selB, EEFSEC;selenocysteine-specific elongation factor
D3M96_18090	K18613	K18613;3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase [EC:4.1.1.51]
D3M96_18105	K19611	fepA, pfeA, iroN, pirA;ferric enterobactin receptor
D3M96_18115	K01008	selD, SEPHS;selenide, water dikinase [EC:2.7.9.3]
D3M96_18120	K06917	selU;tRNA 2-selenouridine synthase [EC:2.9.1.-]
D3M96_18130	K00376	nosZ;nitrous-oxide reductase [EC:1.7.2.4]
D3M96_18160	K01810	GPI, pgi;glucose-6-phosphate isomerase [EC:5.3.1.9]
D3M96_18315	K11904	vgrG;type VI secretion system secreted protein VgrG
D3M96_18325	K00632	fadA, fadI;acetyl-CoA acyltransferase [EC:2.3.1.16]
D3M96_18330	K07516	fadN;3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D3M96_18345	K02065	mlaF, linL, mkl;phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D3M96_18350	K02066	mlaE, linK;phospholipid/cholesterol/gamma-HCH transport system permease protein
D3M96_18355	K02067	mlaD, linM;phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D3M96_18370	K01990	ABC-2.A;ABC-2 type transport system ATP-binding protein
D3M96_18375	K01992	ABC-2.P;ABC-2 type transport system permease protein
D3M96_18385	K00790	murA;UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D3M96_18390	K00765	hisG;ATP phosphoribosyltransferase [EC:2.4.2.17]
D3M96_18395	K00013	hisD;histidinol dehydrogenase [EC:1.1.1.23]
D3M96_18400	K01693	hisB;imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D3M96_18405	K02501	hisH;imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D3M96_18410	K01814	hisA;phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D3M96_18415	K02500	hisF;imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D3M96_18420	K01496	hisI;phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D3M96_18425	K01523	hisE;phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D3M96_18430	K02503	HINT1, hinT, hit;histidine triad (HIT) family protein
D3M96_18435	K03116	tatA;sec-independent protein translocase protein TatA
D3M96_18440	K03117	tatB;sec-independent protein translocase protein TatB
D3M96_18450	K04771	degP, htrA;serine protease Do [EC:3.4.21.107]
D3M96_18460	K03282	mscL;large conductance mechanosensitive channel
D3M96_18465	K00411	UQCRFS1, RIP1, petA;ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D3M96_18470	K00412	CYTB, petB;ubiquinol-cytochrome c reductase cytochrome b subunit
D3M96_18475	K00413	CYC1, CYT1, petC;ubiquinol-cytochrome c reductase cytochrome c1 subunit
D3M96_18480	K03599	sspA, mglA;stringent starvation protein A
D3M96_18485	K03600	sspB;stringent starvation protein B
D3M96_18490	K02047	cysW;sulfate/thiosulfate transport system permease protein
D3M96_18495	K02046	cysU;sulfate/thiosulfate transport system permease protein
D3M96_18500	K02048	cysP;sulfate/thiosulfate transport system substrate-binding protein
D3M96_18520	K22229	K22229;2-ketogluconate reductase [EC:1.1.1.215]
D3M96_18530	K11690	dctM;C4-dicarboxylate transporter, DctM subunit
D3M96_18545	K22025	denD;D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D3M96_18550	K22131	otnI;2-dehydrotetronate isomerase [EC:5.3.1.35]
D3M96_18555	K19647	hgd;2-hydroxymethylglutarate dehydrogenase [EC:1.1.1.291]
D3M96_18560	K01687	ilvD;dihydroxy-acid dehydratase [EC:4.2.1.9]
D3M96_18565	K13654	mcbR;GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D3M96_18575	K00453	TDO2, kynA;tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D3M96_18595	K00606	panB;3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D3M96_18600	K06221	dkgA;2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D3M96_18610	K01681	ACO, acnA;aconitate hydratase [EC:4.2.1.3]
D3M96_18615	K21088	ydaM;diguanylate cyclase [EC:2.7.7.65]
D3M96_18620	K00563	rlmA1;23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D3M96_18655	K00059	fabG, OAR1;3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D3M96_18665	K06911	K06911;uncharacterized protein
D3M96_18680	K04065	osmY;hyperosmotically inducible periplasmic protein
D3M96_18690	K21405	acoR;sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D3M96_18695	K05306	phnX;phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D3M96_18710	K00093	mdh;methanol dehydrogenase [EC:1.1.1.244]
D3M96_18715	K13896	yejF;microcin C transport system ATP-binding protein
D3M96_18720	K02033	ABC.PE.P;peptide/nickel transport system permease protein
D3M96_18725	K15582	oppC;oligopeptide transport system permease protein
D3M96_18765	K07165	fecR;transmembrane sensor
D3M96_18770	K03088	rpoE;RNA polymerase sigma-70 factor, ECF subfamily
D3M96_18780	K00820	glmS, GFPT;glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D3M96_18785	K05800	ybaO;Lrp/AsnC family transcriptional regulator
D3M96_18795	K04042	glmU;bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D3M96_18815	K02274	coxA, ctaD;cytochrome c oxidase subunit I [EC:1.9.3.1]
D3M96_18850	K02257	COX10, ctaB, cyoE;heme o synthase [EC:2.5.1.141]
D3M96_18855	K07720	yesN;two-component system, response regulator YesN
D3M96_18875	K19611	fepA, pfeA, iroN, pirA;ferric enterobactin receptor
D3M96_18885	K01070	frmB, ESD, fghA;S-formylglutathione hydrolase [EC:3.1.2.12]
D3M96_18890	K00121	frmA, ADH5, adhC;S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D3M96_18895	K06131	clsA_B;cardiolipin synthase A/B [EC:2.7.8.-]
D3M96_18905	K01876	aspS;aspartyl-tRNA synthetase [EC:6.1.1.12]
D3M96_18925	K03179	ubiA;4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D3M96_18930	K05825	LYSN;2-aminoadipate transaminase [EC:2.6.1.-]
D3M96_18940	K01468	hutI, AMDHD1;imidazolonepropionase [EC:3.5.2.7]
D3M96_18960	K01745	hutH, HAL;histidine ammonia-lyase [EC:4.3.1.3]
D3M96_18965	K01712	hutU, UROC1;urocanate hydratase [EC:4.2.1.49]
D3M96_18990	K19591	cueR;MerR family transcriptional regulator, copper efflux regulator
D3M96_18995	K18552	cmlA, cmlB, floR;MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D3M96_19010	K11209	yghU, yfcG;GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D3M96_19020	K05916	hmp, YHB1;nitric oxide dioxygenase [EC:1.14.12.17]
D3M96_19025	K03862	vanA;vanillate monooxygenase [EC:1.14.13.82]
D3M96_19035	K00832	tyrB;aromatic-amino-acid transaminase [EC:2.6.1.57]
D3M96_19040	K01104	E3.1.3.48;protein-tyrosine phosphatase [EC:3.1.3.48]
D3M96_19045	K07576	K07576;metallo-beta-lactamase family protein
D3M96_19065	K01750	E4.3.1.12, ocd;ornithine cyclodeaminase [EC:4.3.1.12]
D3M96_19070	K00351	nqrF;Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D3M96_19090	K00523	ascD, ddhD, rfbI;CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D3M96_19110	K22602	hpxW;oxamate amidohydrolase [EC:3.5.1.126]
D3M96_19135	K07552	bcr, tcaB;MFS transporter, DHA1 family, multidrug resistance protein
D3M96_19160	K03111	ssb;single-strand DNA-binding protein
D3M96_19170	K03701	uvrA;excinuclease ABC subunit A
D3M96_19175	K01129	dgt;dGTPase [EC:3.1.5.1]
D3M96_19180	K01735	aroB;3-dehydroquinate synthase [EC:4.2.3.4]
D3M96_19185	K00891	E2.7.1.71, aroK, aroL;shikimate kinase [EC:2.7.1.71]
D3M96_19200	K01586	lysA;diaminopimelate decarboxylase [EC:4.1.1.20]
D3M96_19215	K07399	resB, ccs1;cytochrome c biogenesis protein
D3M96_19225	K03978	engB;GTP-binding protein
D3M96_19230	K01698	hemB, ALAD;porphobilinogen synthase [EC:4.2.1.24]
D3M96_19235	K04084	dsbD;thiol:disulfide interchange protein DsbD [EC:1.8.1.8]
D3M96_19240	K03926	cutA;periplasmic divalent cation tolerance protein
D3M96_19255	K09018	rutA;pyrimidine oxygenase [EC:1.14.99.46]
D3M96_19260	K02879	RP-L17, MRPL17, rplQ;large subunit ribosomal protein L17
D3M96_19265	K03040	rpoA;DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D3M96_19270	K02986	RP-S4, rpsD;small subunit ribosomal protein S4
D3M96_19275	K02948	RP-S11, MRPS11, rpsK;small subunit ribosomal protein S11
D3M96_19280	K02952	RP-S13, rpsM;small subunit ribosomal protein S13
D3M96_19285	K02919	RP-L36, MRPL36, rpmJ;large subunit ribosomal protein L36
D3M96_19290	K02518	infA;translation initiation factor IF-1
D3M96_19295	K03076	secY;preprotein translocase subunit SecY
D3M96_19300	K02876	RP-L15, MRPL15, rplO;large subunit ribosomal protein L15
D3M96_19305	K02907	RP-L30, MRPL30, rpmD;large subunit ribosomal protein L30
D3M96_19310	K02988	RP-S5, MRPS5, rpsE;small subunit ribosomal protein S5
D3M96_19315	K02881	RP-L18, MRPL18, rplR;large subunit ribosomal protein L18
D3M96_19320	K02933	RP-L6, MRPL6, rplF;large subunit ribosomal protein L6
D3M96_19325	K02994	RP-S8, rpsH;small subunit ribosomal protein S8
D3M96_19330	K02954	RP-S14, MRPS14, rpsN;small subunit ribosomal protein S14
D3M96_19335	K02931	RP-L5, MRPL5, rplE;large subunit ribosomal protein L5
D3M96_19340	K02895	RP-L24, MRPL24, rplX;large subunit ribosomal protein L24
D3M96_19345	K02874	RP-L14, MRPL14, rplN;large subunit ribosomal protein L14
D3M96_19370	K12537	hasE, prtE;membrane fusion protein, protease secretion system
D3M96_19400	K06445	fadE;acyl-CoA dehydrogenase [EC:1.3.99.-]
D3M96_19405	K07823	pcaF;3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D3M96_19410	K01782	fadJ;3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D3M96_19430	K01897	ACSL, fadD;long-chain acyl-CoA synthetase [EC:6.2.1.3]
D3M96_19435	K00380	cysJ;sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D3M96_19440	K00381	cysI;sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D3M96_19445	K02302	cysG;uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D3M96_19475	K02961	RP-S17, MRPS17, rpsQ;small subunit ribosomal protein S17
D3M96_19480	K02904	RP-L29, rpmC;large subunit ribosomal protein L29
D3M96_19485	K02878	RP-L16, MRPL16, rplP;large subunit ribosomal protein L16
D3M96_19490	K02982	RP-S3, rpsC;small subunit ribosomal protein S3
D3M96_19495	K02890	RP-L22, MRPL22, rplV;large subunit ribosomal protein L22
D3M96_19500	K02965	RP-S19, rpsS;small subunit ribosomal protein S19
D3M96_19505	K02886	RP-L2, MRPL2, rplB;large subunit ribosomal protein L2
D3M96_19510	K02892	RP-L23, MRPL23, rplW;large subunit ribosomal protein L23
D3M96_19515	K02926	RP-L4, MRPL4, rplD;large subunit ribosomal protein L4
D3M96_19520	K02906	RP-L3, MRPL3, rplC;large subunit ribosomal protein L3
D3M96_19525	K02000	proV;glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D3M96_19530	K02001	proW;glycine betaine/proline transport system permease protein
D3M96_19535	K02946	RP-S10, MRPS10, rpsJ;small subunit ribosomal protein S10
D3M96_19540	K02358	tuf, TUFM;elongation factor Tu
D3M96_19545	K02355	fusA, GFM, EFG;elongation factor G
D3M96_19550	K02992	RP-S7, MRPS7, rpsG;small subunit ribosomal protein S7
D3M96_19555	K02950	RP-S12, MRPS12, rpsL;small subunit ribosomal protein S12
D3M96_19590	K03046	rpoC;DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D3M96_19595	K03043	rpoB;DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D3M96_19600	K02935	RP-L7, MRPL12, rplL;large subunit ribosomal protein L7/L12
D3M96_19605	K02864	RP-L10, MRPL10, rplJ;large subunit ribosomal protein L10
D3M96_19610	K02863	RP-L1, MRPL1, rplA;large subunit ribosomal protein L1
D3M96_19615	K02867	RP-L11, MRPL11, rplK;large subunit ribosomal protein L11
D3M96_19620	K02601	nusG;transcription termination/antitermination protein NusG
D3M96_19635	K02358	tuf, TUFM;elongation factor Tu
D3M96_19655	K03497	parB, spo0J;ParB family transcriptional regulator, chromosome partitioning protein
D3M96_19660	K03496	parA, soj;chromosome partitioning protein
D3M96_19665	K03501	gidB, rsmG;16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D3M96_19670	K03495	gidA, mnmG, MTO1;tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D3M96_19675	K14287	ybdL;methionine transaminase [EC:2.6.1.88]
D3M96_19685	K01525	apaH;bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D3M96_19690	K13069	E2.7.7.65;diguanylate cyclase [EC:2.7.7.65]
D3M96_19695	K01613	psd, PISD;phosphatidylserine decarboxylase [EC:4.1.1.65]
D3M96_19705	K01754	E4.3.1.19, ilvA, tdcB;threonine dehydratase [EC:4.3.1.19]
D3M96_19750	K03650	mnmE, trmE, MSS1;tRNA modification GTPase [EC:3.6.-.-]
D3M96_19755	K12903	fom4;(S)-2-hydroxypropylphosphonic acid epoxidase [EC:1.11.1.23]
D3M96_19770	K01750	E4.3.1.12, ocd;ornithine cyclodeaminase [EC:4.3.1.12]
D3M96_19795	K03781	katE, CAT, catB, srpA;catalase [EC:1.11.1.6]
D3M96_19800	K03217	yidC, spoIIIJ, OXA1, ccfA;YidC/Oxa1 family membrane protein insertase
D3M96_19805	K08998	K08998;uncharacterized protein
D3M96_19810	K03536	rnpA;ribonuclease P protein component [EC:3.1.26.5]
D3M96_19815	K02914	RP-L34, MRPL34, rpmH;large subunit ribosomal protein L34