locus-tag class description J5J84_00005 PF00308 Bacterial dnaA protein J5J84_00005 PF08299 Bacterial dnaA protein helix-turn-helix J5J84_00005 PF11638 DnaA N-terminal domain J5J84_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J5J84_00010 PF02767 DNA polymerase III beta subunit, central domain J5J84_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J5J84_00015 PF00204 DNA gyrase B J5J84_00015 PF00986 DNA gyrase B subunit, carboxyl terminus J5J84_00015 PF18053 DNA gyrase B subunit insert domain J5J84_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_00015 PF01751 Toprim domain J5J84_00020 PF01479 S4 domain J5J84_00020 PF00849 RNA pseudouridylate synthase J5J84_00035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_00060 PF13609 Gram-negative porin J5J84_00065 PF00701 Dihydrodipicolinate synthetase family J5J84_00085 PF01266 FAD dependent oxidoreductase J5J84_00095 PF04324 BFD-like [2Fe-2S] binding domain J5J84_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_00100 PF00378 Enoyl-CoA hydratase/isomerase J5J84_00105 PF03060 Nitronate monooxygenase J5J84_00110 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_00115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_00115 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_00115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_00125 PF02515 CoA-transferase family III J5J84_00135 PF02515 CoA-transferase family III J5J84_00140 PF00392 Bacterial regulatory proteins, gntR family J5J84_00140 PF07729 FCD domain J5J84_00145 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_00155 PF00970 Oxidoreductase FAD-binding domain J5J84_00155 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_00155 PF00175 Oxidoreductase NAD-binding domain J5J84_00160 PF00355 Rieske [2Fe-2S] domain J5J84_00165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J5J84_00165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J5J84_00170 PF03466 LysR substrate binding domain J5J84_00170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_00180 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_00190 PF02653 Branched-chain amino acid transport system / permease component J5J84_00195 PF02653 Branched-chain amino acid transport system / permease component J5J84_00195 PF11862 Domain of unknown function (DUF3382) J5J84_00200 PF00005 ABC transporter J5J84_00205 PF13193 AMP-binding enzyme C-terminal domain J5J84_00205 PF00501 AMP-binding enzyme J5J84_00215 PF00364 Biotin-requiring enzyme J5J84_00215 PF00561 alpha/beta hydrolase fold J5J84_00220 PF00155 Aminotransferase class I and II J5J84_00220 PF00392 Bacterial regulatory proteins, gntR family J5J84_00225 PF00378 Enoyl-CoA hydratase/isomerase J5J84_00230 PF17645 Arylmalonate decarboxylase J5J84_00235 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_00245 PF00892 EamA-like transporter family J5J84_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_00250 PF03466 LysR substrate binding domain J5J84_00260 PF00005 ABC transporter J5J84_00260 PF08402 TOBE domain J5J84_00270 PF00155 Aminotransferase class I and II J5J84_00280 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5J84_00280 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5J84_00285 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_00310 PF16347 Domain of unknown function (DUF4976) J5J84_00310 PF00884 Sulfatase J5J84_00320 PF01047 MarR family J5J84_00335 PF12802 MarR family J5J84_00345 PF01494 FAD binding domain J5J84_00350 PF07883 Cupin domain J5J84_00355 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5J84_00360 PF00795 Carbon-nitrogen hydrolase J5J84_00365 PF04199 Putative cyclase J5J84_00370 PF00175 Oxidoreductase NAD-binding domain J5J84_00370 PF00970 Oxidoreductase FAD-binding domain J5J84_00370 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_00375 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J5J84_00375 PF00355 Rieske [2Fe-2S] domain J5J84_00380 PF00866 Ring hydroxylating beta subunit J5J84_00385 PF00501 AMP-binding enzyme J5J84_00385 PF13193 AMP-binding enzyme C-terminal domain J5J84_00410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_00440 PF01613 Flavin reductase like domain J5J84_00450 PF12833 Helix-turn-helix domain J5J84_00460 PF00005 ABC transporter J5J84_00465 PF02261 Aspartate decarboxylase J5J84_00470 PF07715 TonB-dependent Receptor Plug Domain J5J84_00470 PF00593 TonB dependent receptor J5J84_00480 PF04542 Sigma-70 region 2 J5J84_00480 PF08281 Sigma-70, region 4 J5J84_00485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5J84_00485 PF00005 ABC transporter J5J84_00490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5J84_00490 PF00005 ABC transporter J5J84_00495 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_00495 PF12911 N-terminal TM domain of oligopeptide transport permease C J5J84_00500 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_00505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5J84_00510 PF00817 impB/mucB/samB family J5J84_00510 PF11799 impB/mucB/samB family C-terminal domain J5J84_00515 PF08281 Sigma-70, region 4 J5J84_00515 PF04542 Sigma-70 region 2 J5J84_00520 PF04773 FecR protein J5J84_00520 PF16220 Domain of unknown function (DUF4880) J5J84_00525 PF00593 TonB dependent receptor J5J84_00525 PF07715 TonB-dependent Receptor Plug Domain J5J84_00530 PF00144 Beta-lactamase J5J84_00530 PF11954 Domain of unknown function (DUF3471) J5J84_00535 PF00202 Aminotransferase class-III J5J84_00555 PF03180 NLPA lipoprotein J5J84_00560 PF03180 NLPA lipoprotein J5J84_00565 PF09383 NIL domain J5J84_00565 PF00005 ABC transporter J5J84_00570 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_00575 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J5J84_00575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_00580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J5J84_00580 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_00580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_00585 PF03180 NLPA lipoprotein J5J84_00590 PF00296 Luciferase-like monooxygenase J5J84_00595 PF03180 NLPA lipoprotein J5J84_00605 PF02796 Helix-turn-helix domain of resolvase J5J84_00605 PF00239 Resolvase, N terminal domain J5J84_00625 PF00296 Luciferase-like monooxygenase J5J84_00630 PF03358 NADPH-dependent FMN reductase J5J84_00640 PF14525 AraC-binding-like domain J5J84_00640 PF12833 Helix-turn-helix domain J5J84_00655 PF03466 LysR substrate binding domain J5J84_00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_00660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J5J84_00660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J5J84_00665 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_00675 PF01274 Malate synthase J5J84_00680 PF01048 Phosphorylase superfamily J5J84_00680 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus J5J84_00690 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_00695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_00710 PF00205 Thiamine pyrophosphate enzyme, central domain J5J84_00710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5J84_00710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5J84_00715 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_00725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_00735 PF01548 Transposase J5J84_00735 PF02371 Transposase IS116/IS110/IS902 family J5J84_00740 PF01751 Toprim domain J5J84_00740 PF01131 DNA topoisomerase J5J84_00750 PF04361 Protein of unknown function (DUF494) J5J84_00755 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5J84_00760 PF02785 Biotin carboxylase C-terminal domain J5J84_00760 PF00289 Biotin carboxylase, N-terminal domain J5J84_00760 PF00364 Biotin-requiring enzyme J5J84_00760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5J84_00765 PF01039 Carboxyl transferase domain J5J84_00770 PF02803 Thiolase, C-terminal domain J5J84_00770 PF00108 Thiolase, N-terminal domain J5J84_00775 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) J5J84_00780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_00780 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_00780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_00785 PF00376 MerR family regulatory protein J5J84_00785 PF09278 MerR, DNA binding J5J84_00795 PF01053 Cys/Met metabolism PLP-dependent enzyme J5J84_00800 PF01323 DSBA-like thioredoxin domain J5J84_00800 PF00085 Thioredoxin J5J84_00810 PF03485 Arginyl tRNA synthetase N terminal domain J5J84_00810 PF00750 tRNA synthetases class I (R) J5J84_00810 PF05746 DALR anticodon binding domain J5J84_00830 PF00682 HMGL-like J5J84_00830 PF08502 LeuA allosteric (dimerisation) domain J5J84_00845 PF00309 Sigma-54 factor, Activator interacting domain (AID) J5J84_00845 PF04963 Sigma-54 factor, core binding domain J5J84_00845 PF04552 Sigma-54, DNA binding domain J5J84_00850 PF00593 TonB dependent receptor J5J84_00850 PF07715 TonB-dependent Receptor Plug Domain J5J84_00855 PF00694 Aconitase C-terminal domain J5J84_00860 PF00330 Aconitase family (aconitate hydratase) J5J84_00865 PF00682 HMGL-like J5J84_00870 PF02515 CoA-transferase family III J5J84_00875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_00875 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5J84_00885 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_00890 PF00857 Isochorismatase family J5J84_00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_00895 PF03466 LysR substrate binding domain J5J84_00905 PF00210 Ferritin-like domain J5J84_00915 PF00009 Elongation factor Tu GTP binding domain J5J84_00915 PF03144 Elongation factor Tu domain 2 J5J84_00915 PF16658 Class II release factor RF3, C-terminal domain J5J84_00920 PF01810 LysE type translocator J5J84_00925 PF00271 Helicase conserved C-terminal domain J5J84_00925 PF00270 DEAD/DEAH box helicase J5J84_00935 PF04536 TPM domain J5J84_00950 PF12631 MnmE helical domain J5J84_00950 PF10396 GTP-binding protein TrmE N-terminus J5J84_00950 PF01926 50S ribosome-binding GTPase J5J84_00965 PF01425 Amidase J5J84_00970 PF03466 LysR substrate binding domain J5J84_00970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_00980 PF03466 LysR substrate binding domain J5J84_00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_01000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_01010 PF02405 Permease MlaE J5J84_01015 PF00005 ABC transporter J5J84_01020 PF02470 MlaD protein J5J84_01020 PF03886 ABC-type transport auxiliary lipoprotein component J5J84_01035 PF13419 Haloacid dehalogenase-like hydrolase J5J84_01040 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_01050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_01055 PF01548 Transposase J5J84_01055 PF02371 Transposase IS116/IS110/IS902 family J5J84_01070 PF00501 AMP-binding enzyme J5J84_01070 PF13193 AMP-binding enzyme C-terminal domain J5J84_01075 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_01080 PF00392 Bacterial regulatory proteins, gntR family J5J84_01080 PF07729 FCD domain J5J84_01085 PF03466 LysR substrate binding domain J5J84_01085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_01090 PF01266 FAD dependent oxidoreductase J5J84_01100 PF02646 RmuC family J5J84_01105 PF01381 Helix-turn-helix J5J84_01115 PF00563 EAL domain J5J84_01115 PF00990 Diguanylate cyclase, GGDEF domain J5J84_01115 PF03707 Bacterial signalling protein N terminal repeat J5J84_01120 PF00708 Acylphosphatase J5J84_01130 PF16868 NMT1-like family J5J84_01140 PF00849 RNA pseudouridylate synthase J5J84_01145 PF00710 Asparaginase, N-terminal J5J84_01145 PF17763 Glutaminase/Asparaginase C-terminal domain J5J84_01150 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_01155 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_01160 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_01165 PF00005 ABC transporter J5J84_01170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J5J84_01170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J5J84_01175 PF01168 Alanine racemase, N-terminal domain J5J84_01180 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_01190 PF00501 AMP-binding enzyme J5J84_01195 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5J84_01195 PF00005 ABC transporter J5J84_01200 PF02653 Branched-chain amino acid transport system / permease component J5J84_01215 PF00005 ABC transporter J5J84_01225 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_01235 PF00682 HMGL-like J5J84_01240 PF02481 DNA recombination-mediator protein A J5J84_01240 PF17782 DprA winged helix domain J5J84_01245 PF01327 Polypeptide deformylase J5J84_01250 PF00551 Formyl transferase J5J84_01250 PF02911 Formyl transferase, C-terminal domain J5J84_01255 PF00892 EamA-like transporter family J5J84_01260 PF01425 Amidase J5J84_01270 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_01285 PF07286 Protein of unknown function (DUF1445) J5J84_01290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_01290 PF03466 LysR substrate binding domain J5J84_01295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J5J84_01300 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J5J84_01300 PF00534 Glycosyl transferases group 1 J5J84_01305 PF00313 'Cold-shock' DNA-binding domain J5J84_01310 PF00483 Nucleotidyl transferase J5J84_01315 PF03309 Type III pantothenate kinase J5J84_01320 PF02237 Biotin protein ligase C terminal domain J5J84_01320 PF03099 Biotin/lipoate A/B protein ligase family J5J84_01330 PF07943 Penicillin-binding protein 5, C-terminal domain J5J84_01330 PF00768 D-alanyl-D-alanine carboxypeptidase J5J84_01335 PF01063 Amino-transferase class IV J5J84_01340 PF04359 Protein of unknown function (DUF493) J5J84_01345 PF03099 Biotin/lipoate A/B protein ligase family J5J84_01350 PF00378 Enoyl-CoA hydratase/isomerase J5J84_01355 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J5J84_01355 PF04055 Radical SAM superfamily J5J84_01365 PF03167 Uracil DNA glycosylase superfamily J5J84_01410 PF01136 Peptidase family U32 J5J84_01420 PF02036 SCP-2 sterol transfer family J5J84_01445 PF00218 Indole-3-glycerol phosphate synthase J5J84_01450 PF02885 Glycosyl transferase family, helical bundle domain J5J84_01450 PF00591 Glycosyl transferase family, a/b domain J5J84_01455 PF00117 Glutamine amidotransferase class-I J5J84_01460 PF00425 chorismate binding enzyme J5J84_01460 PF04715 Anthranilate synthase component I, N terminal region J5J84_01465 PF13419 Haloacid dehalogenase-like hydrolase J5J84_01475 PF00834 Ribulose-phosphate 3 epimerase family J5J84_01480 PF04379 ApaG domain J5J84_01485 PF06725 3D domain J5J84_01485 PF03562 MltA specific insert domain J5J84_01490 PF01494 FAD binding domain J5J84_01495 PF10411 Disulfide bond isomerase protein N-terminus J5J84_01495 PF13098 Thioredoxin-like domain J5J84_01515 PF00106 short chain dehydrogenase J5J84_01520 PF00550 Phosphopantetheine attachment site J5J84_01520 PF00857 Isochorismatase family J5J84_01525 PF00425 chorismate binding enzyme J5J84_01535 PF05977 Transmembrane secretion effector J5J84_01540 PF00975 Thioesterase domain J5J84_01540 PF00550 Phosphopantetheine attachment site J5J84_01540 PF00668 Condensation domain J5J84_01540 PF00501 AMP-binding enzyme J5J84_01545 PF00550 Phosphopantetheine attachment site J5J84_01545 PF00857 Isochorismatase family J5J84_01550 PF13193 AMP-binding enzyme C-terminal domain J5J84_01550 PF00501 AMP-binding enzyme J5J84_01560 PF00005 ABC transporter J5J84_01565 PF00005 ABC transporter J5J84_01565 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5J84_01580 PF13458 Periplasmic binding protein J5J84_01595 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_01600 PF00005 ABC transporter J5J84_01610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5J84_01610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5J84_01630 PF00005 ABC transporter J5J84_01635 PF01032 FecCD transport family J5J84_01640 PF00756 Putative esterase J5J84_01645 PF00270 DEAD/DEAH box helicase J5J84_01645 PF00271 Helicase conserved C-terminal domain J5J84_01650 PF07690 Major Facilitator Superfamily J5J84_01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_01660 PF03466 LysR substrate binding domain J5J84_01670 PF03471 Transporter associated domain J5J84_01670 PF03741 Integral membrane protein TerC family J5J84_01695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J5J84_01695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J5J84_01705 PF01063 Amino-transferase class IV J5J84_01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_01710 PF03466 LysR substrate binding domain J5J84_01715 PF04235 Protein of unknown function (DUF418) J5J84_01725 PF04229 GrpB protein J5J84_01730 PF13673 Acetyltransferase (GNAT) domain J5J84_01735 PF01636 Phosphotransferase enzyme family J5J84_01750 PF01613 Flavin reductase like domain J5J84_01755 PF01546 Peptidase family M20/M25/M40 J5J84_01760 PF01979 Amidohydrolase family J5J84_01765 PF01979 Amidohydrolase family J5J84_01770 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_01775 PF00005 ABC transporter J5J84_01785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_01785 PF03466 LysR substrate binding domain J5J84_01790 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_01795 PF00005 ABC transporter J5J84_01800 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_01805 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_01810 PF00701 Dihydrodipicolinate synthetase family J5J84_01820 PF01548 Transposase J5J84_01820 PF02371 Transposase IS116/IS110/IS902 family J5J84_01825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5J84_01825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5J84_01830 PF00171 Aldehyde dehydrogenase family J5J84_01840 PF06433 Methylamine dehydrogenase heavy chain (MADH) J5J84_01850 PF00578 AhpC/TSA family J5J84_01855 PF02975 Methylamine dehydrogenase, L chain J5J84_01865 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J5J84_01865 PF12833 Helix-turn-helix domain J5J84_01875 PF01208 Uroporphyrinogen decarboxylase (URO-D) J5J84_01880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J5J84_01880 PF00270 DEAD/DEAH box helicase J5J84_01880 PF18074 Primosomal protein N C-terminal domain J5J84_01880 PF00271 Helicase conserved C-terminal domain J5J84_01880 PF17764 3′ DNA-binding domain (3′BD) J5J84_01885 PF00580 UvrD/REP helicase N-terminal domain J5J84_01885 PF13361 UvrD-like helicase C-terminal domain J5J84_01895 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J5J84_01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_01900 PF01493 GXGXG motif J5J84_01900 PF00310 Glutamine amidotransferases class-II J5J84_01900 PF04898 Glutamate synthase central domain J5J84_01900 PF01645 Conserved region in glutamate synthase J5J84_01905 PF00378 Enoyl-CoA hydratase/isomerase J5J84_01915 PF02515 CoA-transferase family III J5J84_01920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5J84_01920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5J84_01920 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain J5J84_01930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_01945 PF00593 TonB dependent receptor J5J84_01945 PF07715 TonB-dependent Receptor Plug Domain J5J84_01950 PF04262 Glutamate-cysteine ligase J5J84_01960 PF00196 Bacterial regulatory proteins, luxR family J5J84_01960 PF03472 Autoinducer binding domain J5J84_01965 PF00561 alpha/beta hydrolase fold J5J84_01975 PF07690 Major Facilitator Superfamily J5J84_01980 PF03458 UPF0126 domain J5J84_01985 PF04172 LrgB-like family J5J84_01995 PF01042 Endoribonuclease L-PSP J5J84_02000 PF01042 Endoribonuclease L-PSP J5J84_02015 PF05658 Head domain of trimeric autotransporter adhesin J5J84_02015 PF13018 Extended Signal Peptide of Type V secretion system J5J84_02015 PF05662 Coiled stalk of trimeric autotransporter adhesin J5J84_02015 PF03895 YadA-like membrane anchor domain J5J84_02030 PF01810 LysE type translocator J5J84_02040 PF01411 tRNA synthetases class II (A) J5J84_02040 PF02272 DHHA1 domain J5J84_02040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5J84_02045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02045 PF03466 LysR substrate binding domain J5J84_02055 PF00202 Aminotransferase class-III J5J84_02070 PF01923 Cobalamin adenosyltransferase J5J84_02085 PF00004 ATPase family associated with various cellular activities (AAA) J5J84_02085 PF07724 AAA domain (Cdc48 subfamily) J5J84_02090 PF00227 Proteasome subunit J5J84_02095 PF01258 Prokaryotic dksA/traR C4-type zinc finger J5J84_02100 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5J84_02100 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5J84_02105 PF01475 Ferric uptake regulator family J5J84_02115 PF00005 ABC transporter J5J84_02120 PF00950 ABC 3 transport family J5J84_02125 PF01297 Zinc-uptake complex component A periplasmic J5J84_02130 PF02899 Phage integrase, N-terminal SAM-like domain J5J84_02130 PF00589 Phage integrase family J5J84_02140 PF01678 Diaminopimelate epimerase J5J84_02145 PF03279 Bacterial lipid A biosynthesis acyltransferase J5J84_02155 PF02773 S-adenosylmethionine synthetase, C-terminal domain J5J84_02155 PF02772 S-adenosylmethionine synthetase, central domain J5J84_02155 PF00438 S-adenosylmethionine synthetase, N-terminal domain J5J84_02160 PF05221 S-adenosyl-L-homocysteine hydrolase J5J84_02160 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J5J84_02165 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV J5J84_02170 PF02219 Methylenetetrahydrofolate reductase J5J84_02180 PF01464 Transglycosylase SLT domain J5J84_02180 PF14718 Soluble lytic murein transglycosylase L domain J5J84_02185 PF01743 Poly A polymerase head domain J5J84_02185 PF12627 Probable RNA and SrmB- binding site of polymerase A J5J84_02200 PF01795 MraW methylase family J5J84_02205 PF01925 Sulfite exporter TauE/SafE J5J84_02210 PF00311 Phosphoenolpyruvate carboxylase J5J84_02215 PF00920 Dehydratase family J5J84_02220 PF02540 NAD synthase J5J84_02230 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_02230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_02230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_02235 PF02515 CoA-transferase family III J5J84_02240 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_02250 PF01594 AI-2E family transporter J5J84_02265 PF13609 Gram-negative porin J5J84_02270 PF00171 Aldehyde dehydrogenase family J5J84_02285 PF12833 Helix-turn-helix domain J5J84_02285 PF14525 AraC-binding-like domain J5J84_02290 PF00440 Bacterial regulatory proteins, tetR family J5J84_02290 PF08361 MAATS-type transcriptional repressor, C-terminal region J5J84_02305 PF13193 AMP-binding enzyme C-terminal domain J5J84_02305 PF00501 AMP-binding enzyme J5J84_02315 PF01494 FAD binding domain J5J84_02320 PF07690 Major Facilitator Superfamily J5J84_02330 PF00248 Aldo/keto reductase family J5J84_02335 PF07690 Major Facilitator Superfamily J5J84_02340 PF03466 LysR substrate binding domain J5J84_02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02350 PF05974 Domain of unknown function (DUF892) J5J84_02360 PF00884 Sulfatase J5J84_02360 PF16347 Domain of unknown function (DUF4976) J5J84_02375 PF02627 Carboxymuconolactone decarboxylase family J5J84_02380 PF07690 Major Facilitator Superfamily J5J84_02385 PF03358 NADPH-dependent FMN reductase J5J84_02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02390 PF03466 LysR substrate binding domain J5J84_02395 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_02395 PF00970 Oxidoreductase FAD-binding domain J5J84_02395 PF00175 Oxidoreductase NAD-binding domain J5J84_02405 PF00593 TonB dependent receptor J5J84_02405 PF07715 TonB-dependent Receptor Plug Domain J5J84_02410 PF01497 Periplasmic binding protein J5J84_02415 PF00005 ABC transporter J5J84_02420 PF01032 FecCD transport family J5J84_02425 PF01032 FecCD transport family J5J84_02430 PF00005 ABC transporter J5J84_02435 PF08021 Siderophore-interacting FAD-binding domain J5J84_02435 PF04954 Siderophore-interacting protein J5J84_02435 PF00005 ABC transporter J5J84_02435 PF00664 ABC transporter transmembrane region J5J84_02440 PF01565 FAD binding domain J5J84_02440 PF09330 D-lactate dehydrogenase, membrane binding J5J84_02445 PF01070 FMN-dependent dehydrogenase J5J84_02450 PF00392 Bacterial regulatory proteins, gntR family J5J84_02450 PF07729 FCD domain J5J84_02455 PF02652 L-lactate permease J5J84_02470 PF00392 Bacterial regulatory proteins, gntR family J5J84_02475 PF01037 Lrp/AsnC ligand binding domain J5J84_02480 PF00266 Aminotransferase class-V J5J84_02485 PF00324 Amino acid permease J5J84_02500 PF00578 AhpC/TSA family J5J84_02505 PF01970 Tripartite tricarboxylate transporter TctA family J5J84_02515 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_02520 PF08220 DeoR-like helix-turn-helix domain J5J84_02520 PF00455 DeoR C terminal sensor domain J5J84_02525 PF08402 TOBE domain J5J84_02525 PF00005 ABC transporter J5J84_02530 PF13416 Bacterial extracellular solute-binding protein J5J84_02535 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_02540 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_02545 PF00149 Calcineurin-like phosphoesterase J5J84_02550 PF03741 Integral membrane protein TerC family J5J84_02555 PF05698 Bacterial trigger factor protein (TF) C-terminus J5J84_02565 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J5J84_02575 PF01966 HD domain J5J84_02580 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_02585 PF13378 Enolase C-terminal domain-like J5J84_02585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5J84_02590 PF01479 S4 domain J5J84_02595 PF07690 Major Facilitator Superfamily J5J84_02600 PF00440 Bacterial regulatory proteins, tetR family J5J84_02610 PF01425 Amidase J5J84_02615 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_02620 PF03466 LysR substrate binding domain J5J84_02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02645 PF00183 Hsp90 protein J5J84_02645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_02650 PF07715 TonB-dependent Receptor Plug Domain J5J84_02650 PF00593 TonB dependent receptor J5J84_02655 PF18331 PKHD-type hydroxylase C-terminal domain J5J84_02655 PF13640 2OG-Fe(II) oxygenase superfamily J5J84_02660 PF01070 FMN-dependent dehydrogenase J5J84_02665 PF01510 N-acetylmuramoyl-L-alanine amidase J5J84_02680 PF00448 SRP54-type protein, GTPase domain J5J84_02680 PF02881 SRP54-type protein, helical bundle domain J5J84_02680 PF02978 Signal peptide binding domain J5J84_02695 PF04972 BON domain J5J84_02695 PF01476 LysM domain J5J84_02700 PF05690 Thiazole biosynthesis protein ThiG J5J84_02700 PF02597 ThiS family J5J84_02705 PF00561 alpha/beta hydrolase fold J5J84_02710 PF02390 Putative methyltransferase J5J84_02730 PF00857 Isochorismatase family J5J84_02735 PF12833 Helix-turn-helix domain J5J84_02735 PF14525 AraC-binding-like domain J5J84_02755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02755 PF03466 LysR substrate binding domain J5J84_02760 PF01699 Sodium/calcium exchanger protein J5J84_02765 PF00990 Diguanylate cyclase, GGDEF domain J5J84_02765 PF00072 Response regulator receiver domain J5J84_02770 PF01323 DSBA-like thioredoxin domain J5J84_02775 PF00083 Sugar (and other) transporter J5J84_02775 PF07690 Major Facilitator Superfamily J5J84_02780 PF00596 Class II Aldolase and Adducin N-terminal domain J5J84_02800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J5J84_02805 PF07883 Cupin domain J5J84_02805 PF05899 Protein of unknown function (DUF861) J5J84_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02810 PF03466 LysR substrate binding domain J5J84_02815 PF16916 Dimerisation domain of Zinc Transporter J5J84_02815 PF01545 Cation efflux family J5J84_02820 PF01588 Putative tRNA binding domain J5J84_02820 PF09334 tRNA synthetases class I (M) J5J84_02830 PF10609 NUBPL iron-transfer P-loop NTPase J5J84_02845 PF00692 dUTPase J5J84_02850 PF01276 Orn/Lys/Arg decarboxylase, major domain J5J84_02850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J5J84_02850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J5J84_02860 PF01597 Glycine cleavage H-protein J5J84_02865 PF00186 Dihydrofolate reductase J5J84_02870 PF00303 Thymidylate synthase J5J84_02875 PF02566 OsmC-like protein J5J84_02880 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5J84_02905 PF03232 Ubiquinone biosynthesis protein COQ7 J5J84_02910 PF00224 Pyruvate kinase, barrel domain J5J84_02910 PF02887 Pyruvate kinase, alpha/beta domain J5J84_02915 PF03928 Haem-degrading J5J84_02920 PF13660 Domain of unknown function (DUF4147) J5J84_02920 PF05161 MOFRL family J5J84_02925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5J84_02925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5J84_02930 PF01261 Xylose isomerase-like TIM barrel J5J84_02935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5J84_02935 PF00205 Thiamine pyrophosphate enzyme, central domain J5J84_02935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5J84_02940 PF03466 LysR substrate binding domain J5J84_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02950 PF00860 Permease family J5J84_02955 PF01361 Tautomerase enzyme J5J84_02960 PF00596 Class II Aldolase and Adducin N-terminal domain J5J84_02965 PF04115 Ureidoglycolate lyase J5J84_02970 PF09349 OHCU decarboxylase J5J84_02970 PF01014 Uricase J5J84_02975 PF03466 LysR substrate binding domain J5J84_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_02980 PF00953 Glycosyl transferase family 4 J5J84_02985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J5J84_02985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J5J84_02985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J5J84_02990 PF01370 NAD dependent epimerase/dehydratase family J5J84_03000 PF00534 Glycosyl transferases group 1 J5J84_03000 PF13439 Glycosyltransferase Family 4 J5J84_03005 PF13439 Glycosyltransferase Family 4 J5J84_03005 PF00534 Glycosyl transferases group 1 J5J84_03010 PF13477 Glycosyl transferase 4-like J5J84_03010 PF00534 Glycosyl transferases group 1 J5J84_03015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5J84_03015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5J84_03015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5J84_03015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5J84_03020 PF01565 FAD binding domain J5J84_03020 PF02913 FAD linked oxidases, C-terminal domain J5J84_03030 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5J84_03035 PF04209 homogentisate 1,2-dioxygenase J5J84_03045 PF01494 FAD binding domain J5J84_03055 PF06827 Zinc finger found in FPG and IleRS J5J84_03055 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J5J84_03055 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J5J84_03065 PF03550 Outer membrane lipoprotein LolB J5J84_03070 PF08544 GHMP kinases C terminal J5J84_03070 PF00288 GHMP kinases N terminal domain J5J84_03080 PF14572 Phosphoribosyl synthetase-associated domain J5J84_03080 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J5J84_03085 PF14693 Ribosomal protein TL5, C-terminal domain J5J84_03085 PF01386 Ribosomal L25p family J5J84_03090 PF01195 Peptidyl-tRNA hydrolase J5J84_03100 PF01926 50S ribosome-binding GTPase J5J84_03100 PF06071 Protein of unknown function (DUF933) J5J84_03105 PF00589 Phage integrase family J5J84_03105 PF13356 Arm DNA-binding domain J5J84_03110 PF02384 N-6 DNA Methylase J5J84_03110 PF12161 HsdM N-terminal domain J5J84_03120 PF17761 DUF1016 N-terminal domain J5J84_03120 PF06250 YhcG PDDEXK nuclease domain J5J84_03125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J5J84_03125 PF18766 SWI2/SNF2 ATPase J5J84_03125 PF11867 Domain of unknown function (DUF3387) J5J84_03140 PF01909 Nucleotidyltransferase domain J5J84_03140 PF13427 Domain of unknown function (DUF4111) J5J84_03145 PF12848 ABC transporter J5J84_03145 PF16326 ABC transporter C-terminal domain J5J84_03145 PF00005 ABC transporter J5J84_03155 PF00657 GDSL-like Lipase/Acylhydrolase J5J84_03155 PF03797 Autotransporter beta-domain J5J84_03160 PF00484 Carbonic anhydrase J5J84_03165 PF03466 LysR substrate binding domain J5J84_03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_03175 PF00005 ABC transporter J5J84_03180 PF03379 CcmB protein J5J84_03185 PF01578 Cytochrome C assembly protein J5J84_03195 PF03100 CcmE J5J84_03200 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J5J84_03200 PF01578 Cytochrome C assembly protein J5J84_03205 PF08534 Redoxin J5J84_03210 PF03918 Cytochrome C biogenesis protein J5J84_03220 PF02683 Cytochrome C biogenesis protein transmembrane region J5J84_03230 PF12833 Helix-turn-helix domain J5J84_03230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5J84_03230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5J84_03230 PF02805 Metal binding domain of Ada J5J84_03250 PF02653 Branched-chain amino acid transport system / permease component J5J84_03255 PF02653 Branched-chain amino acid transport system / permease component J5J84_03255 PF11862 Domain of unknown function (DUF3382) J5J84_03260 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5J84_03260 PF00005 ABC transporter J5J84_03265 PF00005 ABC transporter J5J84_03270 PF00034 Cytochrome c J5J84_03270 PF03150 Di-haem cytochrome c peroxidase J5J84_03275 PF01842 ACT domain J5J84_03275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5J84_03275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5J84_03280 PF02082 Transcriptional regulator J5J84_03285 PF01152 Bacterial-like globin J5J84_03290 PF00535 Glycosyl transferase family 2 J5J84_03320 PF00582 Universal stress protein family J5J84_03330 PF02634 FdhD/NarQ family J5J84_03335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J5J84_03335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J5J84_03335 PF00384 Molybdopterin oxidoreductase J5J84_03335 PF12838 4Fe-4S dicluster domain J5J84_03335 PF01568 Molydopterin dinucleotide binding domain J5J84_03340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J5J84_03340 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J5J84_03340 PF00037 4Fe-4S binding domain J5J84_03350 PF12727 PBP superfamily domain J5J84_03350 PF12728 Helix-turn-helix domain J5J84_03355 PF04055 Radical SAM superfamily J5J84_03355 PF06463 Molybdenum Cofactor Synthesis C J5J84_03360 PF12804 MobA-like NTP transferase domain J5J84_03365 PF03453 MoeA N-terminal region (domain I and II) J5J84_03365 PF03454 MoeA C-terminal region (domain IV) J5J84_03365 PF00994 Probable molybdopterin binding domain J5J84_03370 PF00994 Probable molybdopterin binding domain J5J84_03375 PF02391 MoaE protein J5J84_03385 PF01967 MoaC family J5J84_03390 PF00196 Bacterial regulatory proteins, luxR family J5J84_03390 PF00072 Response regulator receiver domain J5J84_03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_03395 PF00512 His Kinase A (phospho-acceptor) domain J5J84_03395 PF00989 PAS fold J5J84_03400 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_03405 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5J84_03410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_03415 PF08534 Redoxin J5J84_03435 PF04055 Radical SAM superfamily J5J84_03435 PF06968 Biotin and Thiamin Synthesis associated domain J5J84_03450 PF00873 AcrB/AcrD/AcrF family J5J84_03455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5J84_03510 PF00990 Diguanylate cyclase, GGDEF domain J5J84_03510 PF00563 EAL domain J5J84_03510 PF03707 Bacterial signalling protein N terminal repeat J5J84_03515 PF00795 Carbon-nitrogen hydrolase J5J84_03520 PF00571 CBS domain J5J84_03520 PF03471 Transporter associated domain J5J84_03525 PF02130 Uncharacterized protein family UPF0054 J5J84_03530 PF02562 PhoH-like protein J5J84_03535 PF00919 Uncharacterized protein family UPF0004 J5J84_03535 PF04055 Radical SAM superfamily J5J84_03535 PF01938 TRAM domain J5J84_03545 PF00557 Metallopeptidase family M24 J5J84_03550 PF02355 Protein export membrane protein J5J84_03550 PF07549 SecD/SecF GG Motif J5J84_03555 PF13721 SecD export protein N-terminal TM region J5J84_03555 PF02355 Protein export membrane protein J5J84_03555 PF07549 SecD/SecF GG Motif J5J84_03560 PF02699 Preprotein translocase subunit J5J84_03565 PF01702 Queuine tRNA-ribosyltransferase J5J84_03570 PF02547 Queuosine biosynthesis protein J5J84_03575 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J5J84_03590 PF05957 Bacterial protein of unknown function (DUF883) J5J84_03605 PF03466 LysR substrate binding domain J5J84_03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_03615 PF00970 Oxidoreductase FAD-binding domain J5J84_03615 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_03620 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J5J84_03635 PF01425 Amidase J5J84_03645 PF08946 Osmosensory transporter coiled coil J5J84_03645 PF00083 Sugar (and other) transporter J5J84_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_03650 PF03466 LysR substrate binding domain J5J84_03655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5J84_03660 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J5J84_03665 PF01464 Transglycosylase SLT domain J5J84_03670 PF00155 Aminotransferase class I and II J5J84_03680 PF01515 Phosphate acetyl/butaryl transferase J5J84_03680 PF03949 Malic enzyme, NAD binding domain J5J84_03680 PF00390 Malic enzyme, N-terminal domain J5J84_03690 PF01337 Barstar (barnase inhibitor) J5J84_03695 PF04452 RNA methyltransferase J5J84_03700 PF02779 Transketolase, pyrimidine binding domain J5J84_03700 PF02780 Transketolase, C-terminal domain J5J84_03700 PF00456 Transketolase, thiamine diphosphate binding domain J5J84_03705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J5J84_03705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J5J84_03710 PF00162 Phosphoglycerate kinase J5J84_03725 PF00171 Aldehyde dehydrogenase family J5J84_03735 PF00994 Probable molybdopterin binding domain J5J84_03740 PF01116 Fructose-bisphosphate aldolase class-II J5J84_03745 PF01259 SAICAR synthetase J5J84_03750 PF00731 AIR carboxylase J5J84_03755 PF02222 ATP-grasp domain J5J84_03755 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J5J84_03760 PF03481 Putative GTP-binding controlling metal-binding J5J84_03760 PF01300 Telomere recombination J5J84_03765 PF00561 alpha/beta hydrolase fold J5J84_03770 PF00171 Aldehyde dehydrogenase family J5J84_03770 PF01575 MaoC like domain J5J84_03775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_03775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_03775 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_03780 PF03466 LysR substrate binding domain J5J84_03790 PF00551 Formyl transferase J5J84_03795 PF01266 FAD dependent oxidoreductase J5J84_03800 PF01613 Flavin reductase like domain J5J84_03805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J5J84_03805 PF01243 Pyridoxamine 5'-phosphate oxidase J5J84_03815 PF00899 ThiF family J5J84_03825 PF04715 Anthranilate synthase component I, N terminal region J5J84_03825 PF00425 chorismate binding enzyme J5J84_03830 PF00005 ABC transporter J5J84_03830 PF17755 UvrA DNA-binding domain J5J84_03830 PF17760 UvrA interaction domain J5J84_03835 PF00535 Glycosyl transferase family 2 J5J84_03845 PF00005 ABC transporter J5J84_03845 PF12848 ABC transporter J5J84_03865 PF03776 Septum formation topological specificity factor MinE J5J84_03870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5J84_03875 PF05209 Septum formation inhibitor MinC, N-terminal domain J5J84_03875 PF03775 Septum formation inhibitor MinC, C-terminal domain J5J84_03880 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5J84_03880 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J5J84_03885 PF01654 Cytochrome bd terminal oxidase subunit I J5J84_03890 PF02322 Cytochrome bd terminal oxidase subunit II J5J84_03895 PF00654 Voltage gated chloride channel J5J84_03905 PF16124 RecQ zinc-binding J5J84_03905 PF09382 RQC domain J5J84_03905 PF00271 Helicase conserved C-terminal domain J5J84_03905 PF00270 DEAD/DEAH box helicase J5J84_03905 PF00570 HRDC domain J5J84_03910 PF02867 Ribonucleotide reductase, barrel domain J5J84_03910 PF00317 Ribonucleotide reductase, all-alpha domain J5J84_03910 PF03477 ATP cone domain J5J84_03915 PF00268 Ribonucleotide reductase, small chain J5J84_03920 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_03925 PF00005 ABC transporter J5J84_03925 PF16326 ABC transporter C-terminal domain J5J84_03925 PF12848 ABC transporter J5J84_03935 PF02381 MraZ protein, putative antitoxin-like J5J84_03940 PF01795 MraW methylase family J5J84_03945 PF04999 Cell division protein FtsL J5J84_03950 PF00905 Penicillin binding protein transpeptidase domain J5J84_03950 PF03717 Penicillin-binding Protein dimerisation domain J5J84_03955 PF01225 Mur ligase family, catalytic domain J5J84_03955 PF02875 Mur ligase family, glutamate ligase domain J5J84_03955 PF08245 Mur ligase middle domain J5J84_03960 PF00953 Glycosyl transferase family 4 J5J84_03965 PF02875 Mur ligase family, glutamate ligase domain J5J84_03965 PF08245 Mur ligase middle domain J5J84_03970 PF01098 Cell cycle protein J5J84_03975 PF04101 Glycosyltransferase family 28 C-terminal domain J5J84_03975 PF03033 Glycosyltransferase family 28 N-terminal domain J5J84_03980 PF01225 Mur ligase family, catalytic domain J5J84_03980 PF02875 Mur ligase family, glutamate ligase domain J5J84_03980 PF08245 Mur ligase middle domain J5J84_03985 PF01820 D-ala D-ala ligase N-terminus J5J84_03985 PF07478 D-ala D-ala ligase C-terminus J5J84_03990 PF08478 POTRA domain, FtsQ-type J5J84_03990 PF03799 Cell division protein FtsQ J5J84_03995 PF02491 SHS2 domain inserted in FTSA J5J84_04000 PF12327 FtsZ family, C-terminal domain J5J84_04000 PF00091 Tubulin/FtsZ family, GTPase domain J5J84_04005 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J5J84_04015 PF01551 Peptidase family M23 J5J84_04015 PF10145 Phage-related minor tail protein J5J84_04015 PF01464 Transglycosylase SLT domain J5J84_04020 PF07517 SecA DEAD-like domain J5J84_04020 PF02810 SEC-C motif J5J84_04020 PF01043 SecA preprotein cross-linking domain J5J84_04020 PF07516 SecA Wing and Scaffold domain J5J84_04030 PF00571 CBS domain J5J84_04030 PF01769 Divalent cation transporter J5J84_04030 PF03448 MgtE intracellular N domain J5J84_04035 PF03061 Thioesterase superfamily J5J84_04040 PF01546 Peptidase family M20/M25/M40 J5J84_04040 PF07687 Peptidase dimerisation domain J5J84_04045 PF00501 AMP-binding enzyme J5J84_04045 PF13193 AMP-binding enzyme C-terminal domain J5J84_04050 PF00459 Inositol monophosphatase family J5J84_04055 PF01266 FAD dependent oxidoreductase J5J84_04055 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J5J84_04070 PF00005 ABC transporter J5J84_04070 PF09383 NIL domain J5J84_04075 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_04080 PF03180 NLPA lipoprotein J5J84_04085 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_04090 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_04095 PF00005 ABC transporter J5J84_04105 PF00483 Nucleotidyl transferase J5J84_04110 PF01636 Phosphotransferase enzyme family J5J84_04115 PF04453 LPS transport system D J5J84_04120 PF00639 PPIC-type PPIASE domain J5J84_04120 PF09312 SurA N-terminal domain J5J84_04125 PF00398 Ribosomal RNA adenine dimethylase J5J84_04130 PF07670 Nucleoside recognition J5J84_04135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5J84_04145 PF01553 Acyltransferase J5J84_04155 PF05746 DALR anticodon binding domain J5J84_04155 PF02092 Glycyl-tRNA synthetase beta subunit J5J84_04160 PF02091 Glycyl-tRNA synthetase alpha subunit J5J84_04170 PF00378 Enoyl-CoA hydratase/isomerase J5J84_04175 PF05683 Fumarase C-terminus J5J84_04175 PF05681 Fumarate hydratase (Fumerase) J5J84_04180 PF00440 Bacterial regulatory proteins, tetR family J5J84_04190 PF07690 Major Facilitator Superfamily J5J84_04205 PF03167 Uracil DNA glycosylase superfamily J5J84_04210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J5J84_04215 PF12627 Probable RNA and SrmB- binding site of polymerase A J5J84_04215 PF12626 Polymerase A arginine-rich C-terminus J5J84_04215 PF01743 Poly A polymerase head domain J5J84_04225 PF08299 Bacterial dnaA protein helix-turn-helix J5J84_04225 PF00308 Bacterial dnaA protein J5J84_04230 PF02769 AIR synthase related protein, C-terminal domain J5J84_04230 PF00586 AIR synthase related protein, N-terminal domain J5J84_04235 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J5J84_04245 PF01119 DNA mismatch repair protein, C-terminal domain J5J84_04245 PF08676 MutL C terminal dimerisation domain J5J84_04250 PF09335 SNARE associated Golgi protein J5J84_04255 PF11741 AMIN domain J5J84_04255 PF01520 N-acetylmuramoyl-L-alanine amidase J5J84_04260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J5J84_04270 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_04275 PF01515 Phosphate acetyl/butaryl transferase J5J84_04275 PF03949 Malic enzyme, NAD binding domain J5J84_04275 PF00390 Malic enzyme, N-terminal domain J5J84_04280 PF03466 LysR substrate binding domain J5J84_04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_04285 PF00171 Aldehyde dehydrogenase family J5J84_04290 PF00701 Dihydrodipicolinate synthetase family J5J84_04300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_04310 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_04335 PF01638 HxlR-like helix-turn-helix J5J84_04340 PF13460 NAD(P)H-binding J5J84_04350 PF07690 Major Facilitator Superfamily J5J84_04355 PF04073 Aminoacyl-tRNA editing domain J5J84_04360 PF00589 Phage integrase family J5J84_04360 PF02899 Phage integrase, N-terminal SAM-like domain J5J84_04370 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_04375 PF03459 TOBE domain J5J84_04375 PF00005 ABC transporter J5J84_04380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_04380 PF03459 TOBE domain J5J84_04390 PF13361 UvrD-like helicase C-terminal domain J5J84_04390 PF00580 UvrD/REP helicase N-terminal domain J5J84_04390 PF12705 PD-(D/E)XK nuclease superfamily J5J84_04400 PF12169 DNA polymerase III subunits gamma and tau domain III J5J84_04400 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J5J84_04400 PF12170 DNA polymerase III tau subunit V interacting with alpha J5J84_04405 PF02575 YbaB/EbfC DNA-binding family J5J84_04410 PF02132 RecR protein J5J84_04410 PF13662 Toprim domain J5J84_04415 PF09084 NMT1/THI5 like J5J84_04420 PF00005 ABC transporter J5J84_04425 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_04440 PF07715 TonB-dependent Receptor Plug Domain J5J84_04440 PF00593 TonB dependent receptor J5J84_04450 PF00923 Transaldolase/Fructose-6-phosphate aldolase J5J84_04455 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J5J84_04455 PF00117 Glutamine amidotransferase class-I J5J84_04460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5J84_04460 PF02142 MGS-like domain J5J84_04460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J5J84_04475 PF00300 Histidine phosphatase superfamily (branch 1) J5J84_04480 PF00860 Permease family J5J84_04485 PF01272 Transcription elongation factor, GreA/GreB, C-term J5J84_04485 PF03449 Transcription elongation factor, N-terminal J5J84_04490 PF01985 CRS1 / YhbY (CRM) domain J5J84_04495 PF01728 FtsJ-like methyltransferase J5J84_04500 PF06480 FtsH Extracellular J5J84_04500 PF01434 Peptidase family M41 J5J84_04500 PF00004 ATPase family associated with various cellular activities (AAA) J5J84_04500 PF17862 AAA+ lid domain J5J84_04505 PF00809 Pterin binding enzyme J5J84_04510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5J84_04510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5J84_04510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5J84_04510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5J84_04520 PF02541 Ppx/GppA phosphatase family J5J84_04525 PF02503 Polyphosphate kinase middle domain J5J84_04525 PF13090 Polyphosphate kinase C-terminal domain 2 J5J84_04525 PF17941 Polyphosphate kinase C-terminal domain 1 J5J84_04525 PF13089 Polyphosphate kinase N-terminal domain J5J84_04530 PF12849 PBP superfamily domain J5J84_04535 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_04540 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_04545 PF00005 ABC transporter J5J84_04550 PF00501 AMP-binding enzyme J5J84_04550 PF13193 AMP-binding enzyme C-terminal domain J5J84_04565 PF00072 Response regulator receiver domain J5J84_04565 PF00486 Transcriptional regulatory protein, C terminal J5J84_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_04585 PF03466 LysR substrate binding domain J5J84_04600 PF01593 Flavin containing amine oxidoreductase J5J84_04605 PF00034 Cytochrome c J5J84_04605 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_04610 PF04239 Protein of unknown function (DUF421) J5J84_04620 PF00884 Sulfatase J5J84_04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_04630 PF03466 LysR substrate binding domain J5J84_04650 PF00474 Sodium:solute symporter family J5J84_04655 PF07848 PaaX-like protein J5J84_04655 PF08223 PaaX-like protein C-terminal domain J5J84_04660 PF13091 PLD-like domain J5J84_04660 PF13396 Phospholipase_D-nuclease N-terminal J5J84_04675 PF01300 Telomere recombination J5J84_04680 PF02163 Peptidase family M50 J5J84_04685 PF00701 Dihydrodipicolinate synthetase family J5J84_04690 PF06804 NlpB/DapX lipoprotein J5J84_04710 PF00202 Aminotransferase class-III J5J84_04715 PF00155 Aminotransferase class I and II J5J84_04720 PF00067 Cytochrome P450 J5J84_04730 PF03594 Benzoate membrane transport protein J5J84_04735 PF08007 Cupin superfamily protein J5J84_04740 PF01624 MutS domain I J5J84_04740 PF00488 MutS domain V J5J84_04740 PF05190 MutS family domain IV J5J84_04740 PF05188 MutS domain II J5J84_04740 PF05192 MutS domain III J5J84_04755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5J84_04760 PF00005 ABC transporter J5J84_04760 PF02687 FtsX-like permease family J5J84_04760 PF12704 MacB-like periplasmic core domain J5J84_04765 PF02321 Outer membrane efflux protein J5J84_04770 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J5J84_04775 PF00664 ABC transporter transmembrane region J5J84_04775 PF00005 ABC transporter J5J84_04785 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_04790 PF03466 LysR substrate binding domain J5J84_04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_04795 PF00296 Luciferase-like monooxygenase J5J84_04805 PF00924 Mechanosensitive ion channel J5J84_04805 PF05552 Conserved TM helix J5J84_04810 PF03466 LysR substrate binding domain J5J84_04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_04815 PF08659 KR domain J5J84_04815 PF02801 Beta-ketoacyl synthase, C-terminal domain J5J84_04815 PF00109 Beta-ketoacyl synthase, N-terminal domain J5J84_04815 PF16197 Ketoacyl-synthetase C-terminal extension J5J84_04815 PF14765 Polyketide synthase dehydratase J5J84_04815 PF00107 Zinc-binding dehydrogenase J5J84_04815 PF08240 Alcohol dehydrogenase GroES-like domain J5J84_04815 PF00698 Acyl transferase domain J5J84_04815 PF00550 Phosphopantetheine attachment site J5J84_04820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J5J84_04835 PF01039 Carboxyl transferase domain J5J84_04840 PF06857 Malonate decarboxylase delta subunit (MdcD) J5J84_04845 PF16957 Malonate decarboxylase, alpha subunit, transporter J5J84_04850 PF01425 Amidase J5J84_04855 PF02667 Short chain fatty acid transporter J5J84_04865 PF00588 SpoU rRNA Methylase family J5J84_04870 PF00459 Inositol monophosphatase family J5J84_04875 PF03741 Integral membrane protein TerC family J5J84_04875 PF03471 Transporter associated domain J5J84_04880 PF02673 Bacitracin resistance protein BacA J5J84_04890 PF00149 Calcineurin-like phosphoesterase J5J84_04895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J5J84_04905 PF09190 DALR domain J5J84_04905 PF01406 tRNA synthetases class I (C) catalytic domain J5J84_04915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J5J84_04920 PF09179 TilS substrate binding domain J5J84_04920 PF01171 PP-loop family J5J84_04925 PF01842 ACT domain J5J84_04925 PF13840 ACT domain J5J84_04925 PF00696 Amino acid kinase family J5J84_04945 PF01145 SPFH domain / Band 7 family J5J84_04960 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_04970 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_04975 PF08402 TOBE domain J5J84_04975 PF00005 ABC transporter J5J84_04980 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J5J84_04980 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J5J84_04985 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J5J84_04990 PF02233 NAD(P) transhydrogenase beta subunit J5J84_05015 PF01070 FMN-dependent dehydrogenase J5J84_05020 PF13409 Glutathione S-transferase, N-terminal domain J5J84_05025 PF03358 NADPH-dependent FMN reductase J5J84_05040 PF02245 Methylpurine-DNA glycosylase (MPG) J5J84_05045 PF00962 Adenosine/AMP deaminase J5J84_05050 PF04241 Protein of unknown function (DUF423) J5J84_05055 PF01544 CorA-like Mg2+ transporter protein J5J84_05060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_05060 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_05060 PF18158 Adaptive response protein AidB N-terminal domain J5J84_05075 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_05080 PF12911 N-terminal TM domain of oligopeptide transport permease C J5J84_05080 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_05085 PF00005 ABC transporter J5J84_05085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5J84_05095 PF01590 GAF domain J5J84_05095 PF00158 Sigma-54 interaction domain J5J84_05095 PF02954 Bacterial regulatory protein, Fis family J5J84_05100 PF00171 Aldehyde dehydrogenase family J5J84_05105 PF00465 Iron-containing alcohol dehydrogenase J5J84_05120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_05125 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_05135 PF02803 Thiolase, C-terminal domain J5J84_05135 PF00108 Thiolase, N-terminal domain J5J84_05140 PF13193 AMP-binding enzyme C-terminal domain J5J84_05140 PF00501 AMP-binding enzyme J5J84_05155 PF09285 Elongation factor P, C-terminal J5J84_05155 PF01132 Elongation factor P (EF-P) OB domain J5J84_05155 PF08207 Elongation factor P (EF-P) KOW-like domain J5J84_05170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_05170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_05180 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_05185 PF11791 Aconitate B N-terminal domain J5J84_05185 PF06434 Aconitate hydratase 2 N-terminus J5J84_05185 PF00330 Aconitase family (aconitate hydratase) J5J84_05200 PF00285 Citrate synthase, C-terminal domain J5J84_05210 PF06506 Propionate catabolism activator J5J84_05210 PF00158 Sigma-54 interaction domain J5J84_05210 PF02954 Bacterial regulatory protein, Fis family J5J84_05215 PF07690 Major Facilitator Superfamily J5J84_05225 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J5J84_05225 PF00056 lactate/malate dehydrogenase, NAD binding domain J5J84_05230 PF00392 Bacterial regulatory proteins, gntR family J5J84_05230 PF07702 UTRA domain J5J84_05235 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J5J84_05245 PF00890 FAD binding domain J5J84_05245 PF02910 Fumarate reductase flavoprotein C-term J5J84_05250 PF13085 2Fe-2S iron-sulfur cluster binding domain J5J84_05255 PF03937 Flavinator of succinate dehydrogenase J5J84_05260 PF00285 Citrate synthase, C-terminal domain J5J84_05265 PF07729 FCD domain J5J84_05265 PF00392 Bacterial regulatory proteins, gntR family J5J84_05270 PF02652 L-lactate permease J5J84_05275 PF00390 Malic enzyme, N-terminal domain J5J84_05275 PF03949 Malic enzyme, NAD binding domain J5J84_05275 PF01515 Phosphate acetyl/butaryl transferase J5J84_05280 PF00676 Dehydrogenase E1 component J5J84_05280 PF16870 2-oxoglutarate dehydrogenase C-terminal J5J84_05280 PF16078 2-oxoglutarate dehydrogenase N-terminus J5J84_05280 PF02779 Transketolase, pyrimidine binding domain J5J84_05285 PF00364 Biotin-requiring enzyme J5J84_05285 PF02817 e3 binding domain J5J84_05285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J5J84_05290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5J84_05290 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_05295 PF03969 AFG1-like ATPase J5J84_05300 PF00579 tRNA synthetases class I (W and Y) J5J84_05305 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_05315 PF16921 Tex protein YqgF-like domain J5J84_05315 PF17674 HHH domain J5J84_05315 PF00575 S1 RNA binding domain J5J84_05315 PF09371 Tex-like protein N-terminal domain J5J84_05320 PF04851 Type III restriction enzyme, res subunit J5J84_05320 PF13307 Helicase C-terminal domain J5J84_05330 PF01638 HxlR-like helix-turn-helix J5J84_05340 PF06249 Ethanolamine utilisation protein EutQ J5J84_05350 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_05360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5J84_05360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_05365 PF00440 Bacterial regulatory proteins, tetR family J5J84_05365 PF08361 MAATS-type transcriptional repressor, C-terminal region J5J84_05370 PF13525 Outer membrane lipoprotein J5J84_05375 PF00849 RNA pseudouridylate synthase J5J84_05375 PF01479 S4 domain J5J84_05380 PF02578 Multi-copper polyphenol oxidoreductase laccase J5J84_05385 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J5J84_05390 PF00106 short chain dehydrogenase J5J84_05395 PF05233 PHB accumulation regulatory domain J5J84_05395 PF07879 PHB/PHA accumulation regulator DNA-binding domain J5J84_05420 PF04079 Segregation and condensation complex subunit ScpB J5J84_05425 PF00849 RNA pseudouridylate synthase J5J84_05425 PF01479 S4 domain J5J84_05430 PF02576 RimP N-terminal domain J5J84_05430 PF17384 RimP C-terminal SH3 domain J5J84_05435 PF13184 NusA-like KH domain J5J84_05435 PF08529 NusA N-terminal domain J5J84_05440 PF11987 Translation-initiation factor 2 J5J84_05440 PF00009 Elongation factor Tu GTP binding domain J5J84_05440 PF08364 Bacterial translation initiation factor IF-2 associated region J5J84_05440 PF04760 Translation initiation factor IF-2, N-terminal region J5J84_05445 PF02033 Ribosome-binding factor A J5J84_05450 PF16198 tRNA pseudouridylate synthase B C-terminal domain J5J84_05450 PF01509 TruB family pseudouridylate synthase (N terminal domain) J5J84_05455 PF00679 Elongation factor G C-terminus J5J84_05455 PF03144 Elongation factor Tu domain 2 J5J84_05455 PF00009 Elongation factor Tu GTP binding domain J5J84_05460 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_05470 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_05475 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_05480 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_05485 PF03641 Possible lysine decarboxylase J5J84_05490 PF01367 5'-3' exonuclease, C-terminal SAM fold J5J84_05490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J5J84_05490 PF00476 DNA polymerase family A J5J84_05490 PF01612 3'-5' exonuclease J5J84_05495 PF02690 Na+/Pi-cotransporter J5J84_05505 PF17831 Pyruvate dehydrogenase E1 component middle domain J5J84_05505 PF00456 Transketolase, thiamine diphosphate binding domain J5J84_05520 PF00583 Acetyltransferase (GNAT) family J5J84_05525 PF01435 Peptidase family M48 J5J84_05535 PF00581 Rhodanese-like domain J5J84_05540 PF02609 Exonuclease VII small subunit J5J84_05545 PF00348 Polyprenyl synthetase J5J84_05550 PF02779 Transketolase, pyrimidine binding domain J5J84_05550 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J5J84_05550 PF02780 Transketolase, C-terminal domain J5J84_05555 PF02649 Type I GTP cyclohydrolase folE2 J5J84_05560 PF01250 Ribosomal protein S6 J5J84_05570 PF01084 Ribosomal protein S18 J5J84_05575 PF03948 Ribosomal protein L9, C-terminal domain J5J84_05575 PF01281 Ribosomal protein L9, N-terminal domain J5J84_05580 PF00772 DnaB-like helicase N terminal domain J5J84_05580 PF03796 DnaB-like helicase C terminal domain J5J84_05585 PF13593 SBF-like CPA transporter family (DUF4137) J5J84_05590 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J5J84_05595 PF02562 PhoH-like protein J5J84_05595 PF13638 PIN domain J5J84_05600 PF00578 AhpC/TSA family J5J84_05605 PF04430 Protein of unknown function (DUF498/DUF598) J5J84_05610 PF00155 Aminotransferase class I and II J5J84_05615 PF01842 ACT domain J5J84_05615 PF00742 Homoserine dehydrogenase J5J84_05615 PF03447 Homoserine dehydrogenase, NAD binding domain J5J84_05620 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_05620 PF14821 Threonine synthase N terminus J5J84_05625 PF13302 Acetyltransferase (GNAT) domain J5J84_05630 PF01593 Flavin containing amine oxidoreductase J5J84_05645 PF00842 Alanine racemase, C-terminal domain J5J84_05645 PF01168 Alanine racemase, N-terminal domain J5J84_05655 PF18073 Rubredoxin metal binding domain J5J84_05670 PF13416 Bacterial extracellular solute-binding protein J5J84_05675 PF00005 ABC transporter J5J84_05675 PF08402 TOBE domain J5J84_05680 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_05685 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_05690 PF03960 ArsC family J5J84_05695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J5J84_05700 PF01895 PhoU domain J5J84_05705 PF00563 EAL domain J5J84_05705 PF00990 Diguanylate cyclase, GGDEF domain J5J84_05705 PF01590 GAF domain J5J84_05705 PF00360 Phytochrome region J5J84_05710 PF04362 Bacterial Fe(2+) trafficking J5J84_05715 PF00696 Amino acid kinase family J5J84_05715 PF00583 Acetyltransferase (GNAT) family J5J84_05720 PF00270 DEAD/DEAH box helicase J5J84_05720 PF11898 Domain of unknown function (DUF3418) J5J84_05720 PF04408 Helicase associated domain (HA2) J5J84_05720 PF00271 Helicase conserved C-terminal domain J5J84_05720 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J5J84_05725 PF07733 Bacterial DNA polymerase III alpha NTPase domain J5J84_05725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J5J84_05725 PF14579 Helix-hairpin-helix motif J5J84_05725 PF02811 PHP domain J5J84_05725 PF01336 OB-fold nucleic acid binding domain J5J84_05730 PF13439 Glycosyltransferase Family 4 J5J84_05730 PF00534 Glycosyl transferases group 1 J5J84_05735 PF01522 Polysaccharide deacetylase J5J84_05740 PF00535 Glycosyl transferase family 2 J5J84_05750 PF00534 Glycosyl transferases group 1 J5J84_05750 PF13439 Glycosyltransferase Family 4 J5J84_05760 PF03692 Putative zinc- or iron-chelating domain J5J84_05775 PF00664 ABC transporter transmembrane region J5J84_05775 PF00005 ABC transporter J5J84_05790 PF10150 Ribonuclease E/G family J5J84_05790 PF00575 S1 RNA binding domain J5J84_05825 PF07729 FCD domain J5J84_05825 PF00392 Bacterial regulatory proteins, gntR family J5J84_05830 PF02913 FAD linked oxidases, C-terminal domain J5J84_05830 PF01565 FAD binding domain J5J84_05835 PF01565 FAD binding domain J5J84_05840 PF02754 Cysteine-rich domain J5J84_05840 PF13183 4Fe-4S dicluster domain J5J84_05855 PF12833 Helix-turn-helix domain J5J84_05855 PF14525 AraC-binding-like domain J5J84_05860 PF00171 Aldehyde dehydrogenase family J5J84_05865 PF00171 Aldehyde dehydrogenase family J5J84_05870 PF01266 FAD dependent oxidoreductase J5J84_05885 PF12833 Helix-turn-helix domain J5J84_05885 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J5J84_05915 PF01594 AI-2E family transporter J5J84_05920 PF02690 Na+/Pi-cotransporter J5J84_05935 PF13609 Gram-negative porin J5J84_05945 PF00892 EamA-like transporter family J5J84_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_05955 PF03466 LysR substrate binding domain J5J84_05960 PF03601 Conserved hypothetical protein 698 J5J84_05965 PF04247 Invasion gene expression up-regulator, SirB J5J84_05970 PF00753 Metallo-beta-lactamase superfamily J5J84_05980 PF04143 Sulphur transport J5J84_05990 PF13411 MerR HTH family regulatory protein J5J84_05995 PF00403 Heavy-metal-associated domain J5J84_06000 PF01740 STAS domain J5J84_06000 PF00916 Sulfate permease family J5J84_06005 PF03781 Sulfatase-modifying factor enzyme 1 J5J84_06010 PF00884 Sulfatase J5J84_06015 PF05154 TM2 domain J5J84_06020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J5J84_06020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J5J84_06025 PF01266 FAD dependent oxidoreductase J5J84_06025 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J5J84_06030 PF00877 NlpC/P60 family J5J84_06035 PF05247 Flagellar transcriptional activator (FlhD) J5J84_06040 PF05280 Flagellar transcriptional activator (FlhC) J5J84_06045 PF01618 MotA/TolQ/ExbB proton channel family J5J84_06050 PF13677 Membrane MotB of proton-channel complex MotA/MotB J5J84_06050 PF00691 OmpA family J5J84_06055 PF01627 Hpt domain J5J84_06055 PF02895 Signal transducing histidine kinase, homodimeric domain J5J84_06055 PF09078 CheY binding J5J84_06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_06055 PF01584 CheW-like domain J5J84_06060 PF01584 CheW-like domain J5J84_06065 PF02203 Tar ligand binding domain homologue J5J84_06065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_06065 PF00672 HAMP domain J5J84_06070 PF01739 CheR methyltransferase, SAM binding domain J5J84_06070 PF03705 CheR methyltransferase, all-alpha domain J5J84_06075 PF01339 CheB methylesterase J5J84_06075 PF00072 Response regulator receiver domain J5J84_06080 PF00072 Response regulator receiver domain J5J84_06085 PF04344 Chemotaxis phosphatase, CheZ J5J84_06090 PF01312 FlhB HrpN YscU SpaS Family J5J84_06095 PF00771 FHIPEP family J5J84_06100 PF00448 SRP54-type protein, GTPase domain J5J84_06110 PF01032 FecCD transport family J5J84_06115 PF00005 ABC transporter J5J84_06125 PF07715 TonB-dependent Receptor Plug Domain J5J84_06125 PF00593 TonB dependent receptor J5J84_06135 PF06276 Ferric iron reductase FhuF-like transporter J5J84_06135 PF04183 IucA / IucC family J5J84_06150 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J5J84_06160 PF04316 Anti-sigma-28 factor, FlgM J5J84_06170 PF00460 Flagella basal body rod protein J5J84_06175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5J84_06175 PF00460 Flagella basal body rod protein J5J84_06180 PF13861 FlgD Tudor-like domain J5J84_06180 PF13860 FlgD Ig-like domain J5J84_06180 PF03963 Flagellar hook capping protein - N-terminal region J5J84_06185 PF07559 Flagellar basal body protein FlaE J5J84_06185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5J84_06185 PF00460 Flagella basal body rod protein J5J84_06190 PF00460 Flagella basal body rod protein J5J84_06190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5J84_06195 PF00460 Flagella basal body rod protein J5J84_06195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5J84_06200 PF02107 Flagellar L-ring protein J5J84_06205 PF02119 Flagellar P-ring protein J5J84_06210 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J5J84_06210 PF10135 Rod binding protein J5J84_06215 PF00460 Flagella basal body rod protein J5J84_06215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5J84_06220 PF00669 Bacterial flagellin N-terminal helical region J5J84_06225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_06225 PF00672 HAMP domain J5J84_06225 PF02203 Tar ligand binding domain homologue J5J84_06235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_06235 PF02203 Tar ligand binding domain homologue J5J84_06235 PF00672 HAMP domain J5J84_06245 PF07733 Bacterial DNA polymerase III alpha NTPase domain J5J84_06245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J5J84_06245 PF14579 Helix-hairpin-helix motif J5J84_06245 PF02811 PHP domain J5J84_06245 PF00929 Exonuclease J5J84_06250 PF01311 Bacterial export proteins, family 1 J5J84_06255 PF01313 Bacterial export proteins, family 3 J5J84_06260 PF00813 FliP family J5J84_06265 PF04347 Flagellar biosynthesis protein, FliO J5J84_06270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J5J84_06270 PF16973 Flagellar motor switch protein FliN N-terminal J5J84_06275 PF02154 Flagellar motor switch protein FliM J5J84_06275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J5J84_06280 PF03748 Flagellar basal body-associated protein FliL J5J84_06295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5J84_06295 PF18269 T3SS EscN ATPase C-terminal domain J5J84_06305 PF14842 FliG N-terminal domain J5J84_06305 PF01706 FliG C-terminal domain J5J84_06305 PF14841 FliG middle domain J5J84_06310 PF01514 Secretory protein of YscJ/FliF family J5J84_06310 PF08345 Flagellar M-ring protein C-terminal J5J84_06315 PF02049 Flagellar hook-basal body complex protein FliE J5J84_06320 PF01312 FlhB HrpN YscU SpaS Family J5J84_06335 PF02561 Flagellar protein FliS J5J84_06340 PF07196 Flagellin hook IN motif J5J84_06340 PF07195 Flagellar hook-associated protein 2 C-terminus J5J84_06340 PF02465 Flagellar hook-associated protein 2 N-terminus J5J84_06345 PF03646 FlaG protein J5J84_06350 PF04545 Sigma-70, region 4 J5J84_06350 PF04539 Sigma-70 region 3 J5J84_06350 PF04542 Sigma-70 region 2 J5J84_06360 PF00700 Bacterial flagellin C-terminal helical region J5J84_06360 PF08884 Flagellin D3 domain J5J84_06360 PF00669 Bacterial flagellin N-terminal helical region J5J84_06395 PF00005 ABC transporter J5J84_06405 PF03781 Sulfatase-modifying factor enzyme 1 J5J84_06425 PF04286 Protein of unknown function (DUF445) J5J84_06430 PF08447 PAS fold J5J84_06430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_06435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_06435 PF08447 PAS fold J5J84_06445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J5J84_06445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J5J84_06450 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_06480 PF00589 Phage integrase family J5J84_06480 PF02899 Phage integrase, N-terminal SAM-like domain J5J84_06540 PF05707 Zonular occludens toxin (Zot) J5J84_06545 PF03958 Bacterial type II/III secretion system short domain J5J84_06545 PF00263 Bacterial type II and III secretion system protein J5J84_06555 PF00149 Calcineurin-like phosphoesterase J5J84_06565 PF01381 Helix-turn-helix J5J84_06570 PF05973 Phage derived protein Gp49-like (DUF891) J5J84_06575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J5J84_06580 PF00005 ABC transporter J5J84_06585 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_06595 PF03466 LysR substrate binding domain J5J84_06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_06605 PF01425 Amidase J5J84_06620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_06625 PF03831 PhnA domain J5J84_06625 PF08274 PhnA Zinc-Ribbon J5J84_06635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_06645 PF00324 Amino acid permease J5J84_06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_06665 PF03466 LysR substrate binding domain J5J84_06670 PF07007 Lysozyme inhibitor LprI J5J84_06675 PF00230 Major intrinsic protein J5J84_06710 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding J5J84_06710 PF10518 TAT (twin-arginine translocation) pathway signal sequence J5J84_06710 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_06735 PF00313 'Cold-shock' DNA-binding domain J5J84_06740 PF08521 Two-component sensor kinase N-terminal J5J84_06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_06740 PF00512 His Kinase A (phospho-acceptor) domain J5J84_06745 PF00072 Response regulator receiver domain J5J84_06745 PF00486 Transcriptional regulatory protein, C terminal J5J84_06750 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5J84_06760 PF00034 Cytochrome c J5J84_06765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_06770 PF02371 Transposase IS116/IS110/IS902 family J5J84_06770 PF01548 Transposase J5J84_06775 PF00149 Calcineurin-like phosphoesterase J5J84_06780 PF00593 TonB dependent receptor J5J84_06780 PF07715 TonB-dependent Receptor Plug Domain J5J84_06805 PF01914 MarC family integral membrane protein J5J84_06815 PF00999 Sodium/hydrogen exchanger family J5J84_06825 PF00529 HlyD membrane-fusion protein of T1SS J5J84_06825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5J84_06830 PF12805 FUSC-like inner membrane protein yccS J5J84_06835 PF00860 Permease family J5J84_06855 PF02630 SCO1/SenC J5J84_06865 PF01645 Conserved region in glutamate synthase J5J84_06875 PF12802 MarR family J5J84_06880 PF02464 Competence-damaged protein J5J84_06880 PF00994 Probable molybdopterin binding domain J5J84_06885 PF00694 Aconitase C-terminal domain J5J84_06885 PF00330 Aconitase family (aconitate hydratase) J5J84_06895 PF04303 PrpF protein J5J84_06900 PF12833 Helix-turn-helix domain J5J84_06910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J5J84_06910 PF00355 Rieske [2Fe-2S] domain J5J84_06915 PF00866 Ring hydroxylating beta subunit J5J84_06930 PF01593 Flavin containing amine oxidoreductase J5J84_06935 PF00924 Mechanosensitive ion channel J5J84_06935 PF12795 Mechanosensitive ion channel porin domain J5J84_06935 PF12794 Mechanosensitive ion channel inner membrane domain 1 J5J84_06940 PF12794 Mechanosensitive ion channel inner membrane domain 1 J5J84_06940 PF00924 Mechanosensitive ion channel J5J84_06940 PF12795 Mechanosensitive ion channel porin domain J5J84_06945 PF08946 Osmosensory transporter coiled coil J5J84_06945 PF00083 Sugar (and other) transporter J5J84_06960 PF01381 Helix-turn-helix J5J84_06965 PF00072 Response regulator receiver domain J5J84_06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_06970 PF00512 His Kinase A (phospho-acceptor) domain J5J84_06970 PF01627 Hpt domain J5J84_06970 PF00072 Response regulator receiver domain J5J84_06975 PF00571 CBS domain J5J84_06975 PF01769 Divalent cation transporter J5J84_06975 PF03448 MgtE intracellular N domain J5J84_06985 PF06965 Na+/H+ antiporter 1 J5J84_06990 PF02580 D-Tyr-tRNA(Tyr) deacylase J5J84_06995 PF00893 Small Multidrug Resistance protein J5J84_07005 PF00583 Acetyltransferase (GNAT) family J5J84_07015 PF01435 Peptidase family M48 J5J84_07020 PF07690 Major Facilitator Superfamily J5J84_07075 PF00990 Diguanylate cyclase, GGDEF domain J5J84_07090 PF01037 Lrp/AsnC ligand binding domain J5J84_07090 PF13404 AsnC-type helix-turn-helix domain J5J84_07095 PF01053 Cys/Met metabolism PLP-dependent enzyme J5J84_07105 PF00293 NUDIX domain J5J84_07110 PF04304 Protein of unknown function (DUF454) J5J84_07120 PF00764 Arginosuccinate synthase J5J84_07125 PF00149 Calcineurin-like phosphoesterase J5J84_07130 PF00005 ABC transporter J5J84_07130 PF03459 TOBE domain J5J84_07135 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_07145 PF01547 Bacterial extracellular solute-binding protein J5J84_07150 PF00356 Bacterial regulatory proteins, lacI family J5J84_07160 PF03814 Potassium-transporting ATPase A subunit J5J84_07165 PF02669 K+-transporting ATPase, c chain J5J84_07175 PF02702 Osmosensitive K+ channel His kinase sensor domain J5J84_07175 PF13492 GAF domain J5J84_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_07175 PF00512 His Kinase A (phospho-acceptor) domain J5J84_07175 PF13493 Domain of unknown function (DUF4118) J5J84_07180 PF00486 Transcriptional regulatory protein, C terminal J5J84_07180 PF00072 Response regulator receiver domain J5J84_07185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J5J84_07185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J5J84_07195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5J84_07195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5J84_07200 PF01649 Ribosomal protein S20 J5J84_07205 PF03023 Lipid II flippase MurJ J5J84_07210 PF00106 short chain dehydrogenase J5J84_07215 PF05191 Adenylate kinase, active site lid J5J84_07220 PF02348 Cytidylyltransferase J5J84_07225 PF03966 Trm112p-like protein J5J84_07230 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J5J84_07235 PF02472 Biopolymer transport protein ExbD/TolR J5J84_07240 PF01618 MotA/TolQ/ExbB proton channel family J5J84_07245 PF13742 OB-fold nucleic acid binding domain J5J84_07245 PF02601 Exonuclease VII, large subunit J5J84_07250 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J5J84_07250 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J5J84_07255 PF00210 Ferritin-like domain J5J84_07260 PF02803 Thiolase, C-terminal domain J5J84_07260 PF00108 Thiolase, N-terminal domain J5J84_07270 PF00313 'Cold-shock' DNA-binding domain J5J84_07275 PF02617 ATP-dependent Clp protease adaptor protein ClpS J5J84_07280 PF00004 ATPase family associated with various cellular activities (AAA) J5J84_07280 PF07724 AAA domain (Cdc48 subfamily) J5J84_07280 PF17871 AAA lid domain J5J84_07280 PF02861 Clp amino terminal domain, pathogenicity island component J5J84_07280 PF10431 C-terminal, D2-small domain, of ClpB protein J5J84_07285 PF04403 Paraquat-inducible protein A J5J84_07290 PF02470 MlaD protein J5J84_07300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J5J84_07300 PF14850 DNA-binding domain of Proline dehydrogenase J5J84_07300 PF01619 Proline dehydrogenase J5J84_07300 PF00171 Aldehyde dehydrogenase family J5J84_07305 PF13458 Periplasmic binding protein J5J84_07310 PF02653 Branched-chain amino acid transport system / permease component J5J84_07315 PF02653 Branched-chain amino acid transport system / permease component J5J84_07315 PF11862 Domain of unknown function (DUF3382) J5J84_07320 PF00005 ABC transporter J5J84_07320 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5J84_07325 PF00005 ABC transporter J5J84_07345 PF05971 RNA methyltransferase J5J84_07350 PF00692 dUTPase J5J84_07355 PF04127 DNA / pantothenate metabolism flavoprotein J5J84_07355 PF02441 Flavoprotein J5J84_07360 PF01252 Signal peptidase (SPase) II J5J84_07365 PF08264 Anticodon-binding domain of tRNA J5J84_07365 PF00133 tRNA synthetases class I (I, L, M and V) J5J84_07365 PF06827 Zinc finger found in FPG and IleRS J5J84_07370 PF06574 FAD synthetase J5J84_07370 PF01687 Riboflavin kinase J5J84_07375 PF00551 Formyl transferase J5J84_07380 PF01029 NusB family J5J84_07380 PF01189 16S rRNA methyltransferase RsmB/F J5J84_07390 PF13361 UvrD-like helicase C-terminal domain J5J84_07390 PF00580 UvrD/REP helicase N-terminal domain J5J84_07415 PF00440 Bacterial regulatory proteins, tetR family J5J84_07415 PF02909 Tetracyclin repressor-like, C-terminal domain J5J84_07420 PF13533 Biotin-lipoyl like J5J84_07435 PF07690 Major Facilitator Superfamily J5J84_07445 PF12848 ABC transporter J5J84_07445 PF00005 ABC transporter J5J84_07450 PF05175 Methyltransferase small domain J5J84_07455 PF01546 Peptidase family M20/M25/M40 J5J84_07455 PF07687 Peptidase dimerisation domain J5J84_07460 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J5J84_07460 PF14602 Hexapeptide repeat of succinyl-transferase J5J84_07460 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_07470 PF12833 Helix-turn-helix domain J5J84_07470 PF02311 AraC-like ligand binding domain J5J84_07480 PF03600 Citrate transporter J5J84_07480 PF02080 TrkA-C domain J5J84_07530 PF07690 Major Facilitator Superfamily J5J84_07615 PF01809 Putative membrane protein insertion efficiency factor J5J84_07690 PF02413 Caudovirales tail fibre assembly protein, lambda gpK J5J84_07705 PF00574 Clp protease J5J84_07835 PF00589 Phage integrase family J5J84_07845 PF02515 CoA-transferase family III J5J84_07850 PF05698 Bacterial trigger factor protein (TF) C-terminus J5J84_07850 PF05697 Bacterial trigger factor protein (TF) J5J84_07850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5J84_07855 PF00574 Clp protease J5J84_07860 PF07724 AAA domain (Cdc48 subfamily) J5J84_07860 PF10431 C-terminal, D2-small domain, of ClpB protein J5J84_07860 PF06689 ClpX C4-type zinc finger J5J84_07865 PF02190 ATP-dependent protease La (LON) substrate-binding domain J5J84_07865 PF00004 ATPase family associated with various cellular activities (AAA) J5J84_07865 PF05362 Lon protease (S16) C-terminal proteolytic domain J5J84_07870 PF00717 Peptidase S24-like J5J84_07870 PF01726 LexA DNA binding domain J5J84_07875 PF13302 Acetyltransferase (GNAT) domain J5J84_07880 PF00155 Aminotransferase class I and II J5J84_07885 PF17757 UvrB interaction domain J5J84_07885 PF00271 Helicase conserved C-terminal domain J5J84_07885 PF04851 Type III restriction enzyme, res subunit J5J84_07885 PF02151 UvrB/uvrC motif J5J84_07885 PF12344 Ultra-violet resistance protein B J5J84_07890 PF01451 Low molecular weight phosphotyrosine protein phosphatase J5J84_07895 PF02082 Transcriptional regulator J5J84_07900 PF00266 Aminotransferase class-V J5J84_07905 PF01592 NifU-like N terminal domain J5J84_07910 PF01521 Iron-sulphur cluster biosynthesis J5J84_07915 PF02142 MGS-like domain J5J84_07925 PF00152 tRNA synthetases class II (D, K and N) J5J84_07925 PF01336 OB-fold nucleic acid binding domain J5J84_07930 PF00106 short chain dehydrogenase J5J84_07940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_07940 PF02203 Tar ligand binding domain homologue J5J84_07940 PF00672 HAMP domain J5J84_07945 PF01176 Translation initiation factor 1A / IF-1 J5J84_07950 PF00892 EamA-like transporter family J5J84_07955 PF01758 Sodium Bile acid symporter family J5J84_07965 PF17287 POTRA domain J5J84_07965 PF08479 POTRA domain, ShlB-type J5J84_07965 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J5J84_07975 PF04829 Pre-toxin domain with VENN motif J5J84_07975 PF13018 Extended Signal Peptide of Type V secretion system J5J84_07975 PF13332 Hemagglutinin repeat J5J84_07975 PF05860 haemagglutination activity domain J5J84_08005 PF01368 DHH family J5J84_08005 PF02272 DHHA1 domain J5J84_08005 PF17768 RecJ OB domain J5J84_08015 PF12704 MacB-like periplasmic core domain J5J84_08015 PF02687 FtsX-like permease family J5J84_08020 PF00005 ABC transporter J5J84_08025 PF01026 TatD related DNase J5J84_08030 PF03772 Competence protein J5J84_08030 PF00753 Metallo-beta-lactamase superfamily J5J84_08035 PF12697 Alpha/beta hydrolase family J5J84_08040 PF02811 PHP domain J5J84_08045 PF01272 Transcription elongation factor, GreA/GreB, C-term J5J84_08045 PF03449 Transcription elongation factor, N-terminal J5J84_08050 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J5J84_08050 PF02769 AIR synthase related protein, C-terminal domain J5J84_08050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J5J84_08055 PF00571 CBS domain J5J84_08055 PF00478 IMP dehydrogenase / GMP reductase domain J5J84_08075 PF00958 GMP synthase C terminal domain J5J84_08075 PF02540 NAD synthase J5J84_08075 PF00117 Glutamine amidotransferase class-I J5J84_08090 PF02796 Helix-turn-helix domain of resolvase J5J84_08090 PF00239 Resolvase, N terminal domain J5J84_08100 PF00270 DEAD/DEAH box helicase J5J84_08100 PF13749 Putative ATP-dependent DNA helicase recG C-terminal J5J84_08100 PF17191 RecG wedge domain J5J84_08105 PF13289 SIR2-like domain J5J84_08115 PF12728 Helix-turn-helix domain J5J84_08130 PF00893 Small Multidrug Resistance protein J5J84_08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_08140 PF03466 LysR substrate binding domain J5J84_08145 PF08267 Cobalamin-independent synthase, N-terminal domain J5J84_08145 PF01717 Cobalamin-independent synthase, Catalytic domain J5J84_08155 PF01717 Cobalamin-independent synthase, Catalytic domain J5J84_08165 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_08165 PF18158 Adaptive response protein AidB N-terminal domain J5J84_08165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_08170 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5J84_08170 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5J84_08175 PF02649 Type I GTP cyclohydrolase folE2 J5J84_08180 PF01809 Putative membrane protein insertion efficiency factor J5J84_08190 PF01979 Amidohydrolase family J5J84_08195 PF01475 Ferric uptake regulator family J5J84_08200 PF01502 Phosphoribosyl-AMP cyclohydrolase J5J84_08205 PF01970 Tripartite tricarboxylate transporter TctA family J5J84_08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_08215 PF00072 Response regulator receiver domain J5J84_08215 PF13426 PAS domain J5J84_08215 PF00512 His Kinase A (phospho-acceptor) domain J5J84_08215 PF08448 PAS fold J5J84_08220 PF00486 Transcriptional regulatory protein, C terminal J5J84_08220 PF00072 Response regulator receiver domain J5J84_08225 PF08543 Phosphomethylpyrimidine kinase J5J84_08235 PF14552 Tautomerase enzyme J5J84_08240 PF00970 Oxidoreductase FAD-binding domain J5J84_08240 PF00042 Globin J5J84_08240 PF00175 Oxidoreductase NAD-binding domain J5J84_08250 PF03060 Nitronate monooxygenase J5J84_08255 PF03466 LysR substrate binding domain J5J84_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_08275 PF00440 Bacterial regulatory proteins, tetR family J5J84_08275 PF16859 Tetracyclin repressor-like, C-terminal domain J5J84_08280 PF03033 Glycosyltransferase family 28 N-terminal domain J5J84_08290 PF02798 Glutathione S-transferase, N-terminal domain J5J84_08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_08295 PF03466 LysR substrate binding domain J5J84_08315 PF02798 Glutathione S-transferase, N-terminal domain J5J84_08320 PF00574 Clp protease J5J84_08345 PF00891 O-methyltransferase domain J5J84_08355 PF00581 Rhodanese-like domain J5J84_08355 PF00899 ThiF family J5J84_08360 PF14464 Prokaryotic homologs of the JAB domain J5J84_08365 PF02597 ThiS family J5J84_08370 PF02515 CoA-transferase family III J5J84_08375 PF00501 AMP-binding enzyme J5J84_08375 PF13193 AMP-binding enzyme C-terminal domain J5J84_08380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_08380 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_08380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_08405 PF01022 Bacterial regulatory protein, arsR family J5J84_08425 PF02311 AraC-like ligand binding domain J5J84_08425 PF12833 Helix-turn-helix domain J5J84_08430 PF00682 HMGL-like J5J84_08430 PF08502 LeuA allosteric (dimerisation) domain J5J84_08445 PF03466 LysR substrate binding domain J5J84_08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_08450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5J84_08450 PF13378 Enolase C-terminal domain-like J5J84_08455 PF04444 Catechol dioxygenase N terminus J5J84_08455 PF00775 Dioxygenase J5J84_08460 PF01144 Coenzyme A transferase J5J84_08465 PF01144 Coenzyme A transferase J5J84_08470 PF12146 Serine aminopeptidase, S33 J5J84_08475 PF02426 Muconolactone delta-isomerase J5J84_08480 PF03594 Benzoate membrane transport protein J5J84_08490 PF01926 50S ribosome-binding GTPase J5J84_08495 PF02535 ZIP Zinc transporter J5J84_08500 PF00005 ABC transporter J5J84_08505 PF00850 Histone deacetylase domain J5J84_08510 PF00196 Bacterial regulatory proteins, luxR family J5J84_08510 PF00072 Response regulator receiver domain J5J84_08515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J5J84_08515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J5J84_08540 PF12802 MarR family J5J84_08545 PF01494 FAD binding domain J5J84_08550 PF07690 Major Facilitator Superfamily J5J84_08560 PF01168 Alanine racemase, N-terminal domain J5J84_08565 PF00392 Bacterial regulatory proteins, gntR family J5J84_08565 PF00155 Aminotransferase class I and II J5J84_08570 PF00892 EamA-like transporter family J5J84_08580 PF08774 VRR-NUC domain J5J84_08580 PF18081 Fanconi anemia-associated nuclease SAP domain J5J84_08590 PF00890 FAD binding domain J5J84_08595 PF02445 Quinolinate synthetase A protein J5J84_08600 PF00248 Aldo/keto reductase family J5J84_08615 PF13356 Arm DNA-binding domain J5J84_08615 PF00589 Phage integrase family J5J84_08675 PF03006 Haemolysin-III related J5J84_08680 PF07411 Domain of unknown function (DUF1508) J5J84_08705 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_08710 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_08715 PF00005 ABC transporter J5J84_08740 PF02954 Bacterial regulatory protein, Fis family J5J84_08740 PF00158 Sigma-54 interaction domain J5J84_08740 PF02830 V4R domain J5J84_08740 PF06505 Activator of aromatic catabolism J5J84_08745 PF06099 Phenol hydroxylase subunit J5J84_08750 PF02332 Methane/Phenol/Toluene Hydroxylase J5J84_08755 PF02406 MmoB/DmpM family J5J84_08760 PF02332 Methane/Phenol/Toluene Hydroxylase J5J84_08760 PF04945 YHS domain J5J84_08765 PF04663 Phenol hydroxylase conserved region J5J84_08770 PF00175 Oxidoreductase NAD-binding domain J5J84_08770 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_08770 PF00970 Oxidoreductase FAD-binding domain J5J84_08775 PF03466 LysR substrate binding domain J5J84_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_08780 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J5J84_08780 PF00355 Rieske [2Fe-2S] domain J5J84_08785 PF00866 Ring hydroxylating beta subunit J5J84_08790 PF00175 Oxidoreductase NAD-binding domain J5J84_08790 PF00970 Oxidoreductase FAD-binding domain J5J84_08790 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_08795 PF00106 short chain dehydrogenase J5J84_08800 PF07690 Major Facilitator Superfamily J5J84_08805 PF01810 LysE type translocator J5J84_08815 PF00356 Bacterial regulatory proteins, lacI family J5J84_08825 PF01979 Amidohydrolase family J5J84_08830 PF00860 Permease family J5J84_08850 PF01145 SPFH domain / Band 7 family J5J84_08850 PF16200 C-terminal region of band_7 J5J84_08855 PF01957 NfeD-like C-terminal, partner-binding J5J84_08860 PF13649 Methyltransferase domain J5J84_08870 PF03891 Domain of unknown function (DUF333) J5J84_08880 PF00294 pfkB family carbohydrate kinase J5J84_08900 PF02824 TGS domain J5J84_08900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5J84_08900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5J84_08900 PF03129 Anticodon binding domain J5J84_08905 PF00707 Translation initiation factor IF-3, C-terminal domain J5J84_08905 PF05198 Translation initiation factor IF-3, N-terminal domain J5J84_08910 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J5J84_08910 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J5J84_08920 PF00381 PTS HPr component phosphorylation site J5J84_08925 PF05524 PEP-utilising enzyme, N-terminal J5J84_08925 PF00391 PEP-utilising enzyme, mobile domain J5J84_08925 PF02896 PEP-utilising enzyme, TIM barrel domain J5J84_08950 PF01078 Magnesium chelatase, subunit ChlI J5J84_08950 PF13335 Magnesium chelatase, subunit ChlI C-terminal J5J84_08955 PF01632 Ribosomal protein L35 J5J84_08960 PF00453 Ribosomal protein L20 J5J84_08965 PF01409 tRNA synthetases class II core domain (F) J5J84_08965 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J5J84_08970 PF03483 B3/4 domain J5J84_08970 PF03484 tRNA synthetase B5 domain J5J84_08970 PF03147 Ferredoxin-fold anticodon binding domain J5J84_08970 PF01588 Putative tRNA binding domain J5J84_08970 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J5J84_08975 PF00216 Bacterial DNA-binding protein J5J84_08985 PF04305 Protein of unknown function (DUF455) J5J84_08995 PF00664 ABC transporter transmembrane region J5J84_08995 PF00005 ABC transporter J5J84_09000 PF02082 Transcriptional regulator J5J84_09005 PF01458 Uncharacterized protein family (UPF0051) J5J84_09010 PF00005 ABC transporter J5J84_09015 PF01458 Uncharacterized protein family (UPF0051) J5J84_09020 PF00266 Aminotransferase class-V J5J84_09025 PF01592 NifU-like N terminal domain J5J84_09030 PF01883 Iron-sulfur cluster assembly protein J5J84_09040 PF00795 Carbon-nitrogen hydrolase J5J84_09045 PF07687 Peptidase dimerisation domain J5J84_09045 PF01546 Peptidase family M20/M25/M40 J5J84_09050 PF07364 Metallopeptidase family M81 J5J84_09050 PF07171 MlrC C-terminus J5J84_09060 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT J5J84_09085 PF05658 Head domain of trimeric autotransporter adhesin J5J84_09085 PF05662 Coiled stalk of trimeric autotransporter adhesin J5J84_09085 PF03895 YadA-like membrane anchor domain J5J84_09085 PF13018 Extended Signal Peptide of Type V secretion system J5J84_09090 PF04355 SmpA / OmlA family J5J84_09095 PF02355 Protein export membrane protein J5J84_09095 PF07549 SecD/SecF GG Motif J5J84_09105 PF00486 Transcriptional regulatory protein, C terminal J5J84_09105 PF00072 Response regulator receiver domain J5J84_09110 PF16168 Adhesin of bacterial autotransporter system, probable stalk J5J84_09110 PF03797 Autotransporter beta-domain J5J84_09110 PF13018 Extended Signal Peptide of Type V secretion system J5J84_09115 PF12951 Passenger-associated-transport-repeat J5J84_09150 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_09155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_09165 PF01266 FAD dependent oxidoreductase J5J84_09180 PF03781 Sulfatase-modifying factor enzyme 1 J5J84_09195 PF02386 Cation transport protein J5J84_09200 PF02080 TrkA-C domain J5J84_09200 PF02254 TrkA-N domain J5J84_09205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5J84_09215 PF09424 Yqey-like protein J5J84_09220 PF02811 PHP domain J5J84_09220 PF07733 Bacterial DNA polymerase III alpha NTPase domain J5J84_09220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J5J84_09220 PF14579 Helix-hairpin-helix motif J5J84_09255 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_09260 PF03466 LysR substrate binding domain J5J84_09265 PF00768 D-alanyl-D-alanine carboxypeptidase J5J84_09275 PF01618 MotA/TolQ/ExbB proton channel family J5J84_09280 PF13677 Membrane MotB of proton-channel complex MotA/MotB J5J84_09280 PF00691 OmpA family J5J84_09295 PF00296 Luciferase-like monooxygenase J5J84_09300 PF00106 short chain dehydrogenase J5J84_09310 PF00677 Lumazine binding domain J5J84_09320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J5J84_09320 PF00384 Molybdopterin oxidoreductase J5J84_09320 PF01568 Molydopterin dinucleotide binding domain J5J84_09325 PF03916 Polysulphide reductase, NrfD J5J84_09330 PF13247 4Fe-4S dicluster domain J5J84_09335 PF07715 TonB-dependent Receptor Plug Domain J5J84_09335 PF00593 TonB dependent receptor J5J84_09345 PF03069 Acetamidase/Formamidase family J5J84_09350 PF01979 Amidohydrolase family J5J84_09355 PF00860 Permease family J5J84_09360 PF00011 Hsp20/alpha crystallin family J5J84_09365 PF01546 Peptidase family M20/M25/M40 J5J84_09365 PF07687 Peptidase dimerisation domain J5J84_09395 PF01494 FAD binding domain J5J84_09405 PF00293 NUDIX domain J5J84_09405 PF09297 NADH pyrophosphatase zinc ribbon domain J5J84_09405 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J5J84_09410 PF08340 Domain of unknown function (DUF1732) J5J84_09410 PF03755 YicC-like family, N-terminal region J5J84_09415 PF00149 Calcineurin-like phosphoesterase J5J84_09420 PF13175 AAA ATPase domain J5J84_09425 PF03725 3' exoribonuclease family, domain 2 J5J84_09425 PF01138 3' exoribonuclease family, domain 1 J5J84_09430 PF01725 Ham1 family J5J84_09435 PF06969 HemN C-terminal domain J5J84_09435 PF04055 Radical SAM superfamily J5J84_09440 PF00120 Glutamine synthetase, catalytic domain J5J84_09440 PF03951 Glutamine synthetase, beta-Grasp domain J5J84_09445 PF13673 Acetyltransferase (GNAT) domain J5J84_09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_09450 PF03466 LysR substrate binding domain J5J84_09465 PF00005 ABC transporter J5J84_09465 PF08402 TOBE domain J5J84_09470 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_09480 PF00970 Oxidoreductase FAD-binding domain J5J84_09480 PF00175 Oxidoreductase NAD-binding domain J5J84_09485 PF01042 Endoribonuclease L-PSP J5J84_09490 PF00271 Helicase conserved C-terminal domain J5J84_09490 PF17191 RecG wedge domain J5J84_09490 PF00270 DEAD/DEAH box helicase J5J84_09495 PF03466 LysR substrate binding domain J5J84_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_09500 PF00210 Ferritin-like domain J5J84_09505 PF13458 Periplasmic binding protein J5J84_09510 PF17912 MalK OB fold domain J5J84_09510 PF00005 ABC transporter J5J84_09515 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_09520 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_09525 PF13416 Bacterial extracellular solute-binding protein J5J84_09530 PF14748 Pyrroline-5-carboxylate reductase dimerisation J5J84_09530 PF03807 NADP oxidoreductase coenzyme F420-dependent J5J84_09535 PF13458 Periplasmic binding protein J5J84_09540 PF02653 Branched-chain amino acid transport system / permease component J5J84_09545 PF02653 Branched-chain amino acid transport system / permease component J5J84_09545 PF11862 Domain of unknown function (DUF3382) J5J84_09550 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5J84_09550 PF00005 ABC transporter J5J84_09555 PF00005 ABC transporter J5J84_09560 PF00043 Glutathione S-transferase, C-terminal domain J5J84_09560 PF02798 Glutathione S-transferase, N-terminal domain J5J84_09565 PF00326 Prolyl oligopeptidase family J5J84_09570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5J84_09570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5J84_09580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J5J84_09580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J5J84_09585 PF10415 Fumarase C C-terminus J5J84_09585 PF00206 Lyase J5J84_09590 PF07995 Glucose / Sorbosone dehydrogenase J5J84_09595 PF08241 Methyltransferase domain J5J84_09600 PF00582 Universal stress protein family J5J84_09605 PF00034 Cytochrome c J5J84_09610 PF02311 AraC-like ligand binding domain J5J84_09610 PF12833 Helix-turn-helix domain J5J84_09615 PF00596 Class II Aldolase and Adducin N-terminal domain J5J84_09625 PF00171 Aldehyde dehydrogenase family J5J84_09630 PF01494 FAD binding domain J5J84_09635 PF07690 Major Facilitator Superfamily J5J84_09645 PF03466 LysR substrate binding domain J5J84_09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_09655 PF00403 Heavy-metal-associated domain J5J84_09660 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ J5J84_09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_09675 PF03466 LysR substrate binding domain J5J84_09680 PF02899 Phage integrase, N-terminal SAM-like domain J5J84_09680 PF00589 Phage integrase family J5J84_09695 PF07731 Multicopper oxidase J5J84_09695 PF00394 Multicopper oxidase J5J84_09695 PF07732 Multicopper oxidase J5J84_09700 PF02222 ATP-grasp domain J5J84_09710 PF03976 Polyphosphate kinase 2 (PPK2) J5J84_09740 PF01292 Prokaryotic cytochrome b561 J5J84_09750 PF04264 YceI-like domain J5J84_09755 PF03960 ArsC family J5J84_09760 PF02798 Glutathione S-transferase, N-terminal domain J5J84_09760 PF00043 Glutathione S-transferase, C-terminal domain J5J84_09770 PF03358 NADPH-dependent FMN reductase J5J84_09780 PF01026 TatD related DNase J5J84_09785 PF09115 DNA polymerase III, delta subunit, C terminal J5J84_09795 PF02618 YceG-like family J5J84_09805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5J84_09805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5J84_09815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_09815 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_09815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_09820 PF03658 RnfH family Ubiquitin J5J84_09825 PF03364 Polyketide cyclase / dehydrase and lipid transport J5J84_09830 PF01668 SmpB protein J5J84_09835 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_09845 PF00391 PEP-utilising enzyme, mobile domain J5J84_09845 PF02896 PEP-utilising enzyme, TIM barrel domain J5J84_09845 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J5J84_09850 PF03618 Kinase/pyrophosphorylase J5J84_09855 PF01425 Amidase J5J84_09860 PF00588 SpoU rRNA Methylase family J5J84_09860 PF08032 RNA 2'-O ribose methyltransferase substrate binding J5J84_09865 PF01351 Ribonuclease HII J5J84_09870 PF02684 Lipid-A-disaccharide synthetase J5J84_09875 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J5J84_09875 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_09880 PF07977 FabA-like domain J5J84_09885 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_09885 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J5J84_09890 PF03938 Outer membrane protein (OmpH-like) J5J84_09895 PF01103 Surface antigen J5J84_09895 PF07244 Surface antigen variable number repeat J5J84_09900 PF02163 Peptidase family M50 J5J84_09900 PF13180 PDZ domain J5J84_09900 PF17820 PDZ domain J5J84_09905 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J5J84_09905 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J5J84_09905 PF13288 DXP reductoisomerase C-terminal domain J5J84_09915 PF01255 Putative undecaprenyl diphosphate synthase J5J84_09920 PF01765 Ribosome recycling factor J5J84_09925 PF00696 Amino acid kinase family J5J84_09930 PF00889 Elongation factor TS J5J84_09935 PF00318 Ribosomal protein S2 J5J84_09940 PF00557 Metallopeptidase family M24 J5J84_09945 PF08335 GlnD PII-uridylyltransferase J5J84_09945 PF01966 HD domain J5J84_09945 PF01909 Nucleotidyltransferase domain J5J84_09950 PF01914 MarC family integral membrane protein J5J84_09960 PF00144 Beta-lactamase J5J84_09965 PF00156 Phosphoribosyl transferase domain J5J84_09970 PF02674 Colicin V production protein J5J84_09980 PF02875 Mur ligase family, glutamate ligase domain J5J84_09980 PF08245 Mur ligase middle domain J5J84_09985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5J84_09985 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_09990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J5J84_09990 PF00364 Biotin-requiring enzyme J5J84_09990 PF02817 e3 binding domain J5J84_09995 PF00456 Transketolase, thiamine diphosphate binding domain J5J84_09995 PF17831 Pyruvate dehydrogenase E1 component middle domain J5J84_10000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_10000 PF00512 His Kinase A (phospho-acceptor) domain J5J84_10000 PF00989 PAS fold J5J84_10005 PF00072 Response regulator receiver domain J5J84_10005 PF00196 Bacterial regulatory proteins, luxR family J5J84_10010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J5J84_10010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J5J84_10015 PF01432 Peptidase family M3 J5J84_10020 PF02630 SCO1/SenC J5J84_10025 PF00679 Elongation factor G C-terminus J5J84_10025 PF14492 Elongation Factor G, domain II J5J84_10025 PF03144 Elongation factor Tu domain 2 J5J84_10025 PF00009 Elongation factor Tu GTP binding domain J5J84_10025 PF03764 Elongation factor G, domain IV J5J84_10030 PF01022 Bacterial regulatory protein, arsR family J5J84_10035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5J84_10035 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_10040 PF09278 MerR, DNA binding J5J84_10040 PF00376 MerR family regulatory protein J5J84_10045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_10050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5J84_10055 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_10060 PF01220 Dehydroquinase class II J5J84_10075 PF12697 Alpha/beta hydrolase family J5J84_10080 PF02515 CoA-transferase family III J5J84_10090 PF02803 Thiolase, C-terminal domain J5J84_10090 PF00108 Thiolase, N-terminal domain J5J84_10110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J5J84_10115 PF02321 Outer membrane efflux protein J5J84_10120 PF00873 AcrB/AcrD/AcrF family J5J84_10125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5J84_10125 PF00529 HlyD membrane-fusion protein of T1SS J5J84_10130 PF00005 ABC transporter J5J84_10150 PF00108 Thiolase, N-terminal domain J5J84_10150 PF02803 Thiolase, C-terminal domain J5J84_10155 PF00108 Thiolase, N-terminal domain J5J84_10155 PF02803 Thiolase, C-terminal domain J5J84_10175 PF03466 LysR substrate binding domain J5J84_10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_10180 PF01276 Orn/Lys/Arg decarboxylase, major domain J5J84_10180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J5J84_10180 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J5J84_10200 PF00625 Guanylate kinase J5J84_10205 PF01192 RNA polymerase Rpb6 J5J84_10210 PF13291 ACT domain J5J84_10210 PF02824 TGS domain J5J84_10210 PF04607 Region found in RelA / SpoT proteins J5J84_10220 PF03591 AzlC protein J5J84_10225 PF01551 Peptidase family M23 J5J84_10225 PF08525 Opacity-associated protein A N-terminal motif J5J84_10225 PF01476 LysM domain J5J84_10230 PF09312 SurA N-terminal domain J5J84_10230 PF00639 PPIC-type PPIASE domain J5J84_10235 PF03009 Glycerophosphoryl diester phosphodiesterase family J5J84_10240 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J5J84_10245 PF00849 RNA pseudouridylate synthase J5J84_10245 PF01479 S4 domain J5J84_10250 PF04345 Chorismate lyase J5J84_10255 PF07690 Major Facilitator Superfamily J5J84_10260 PF00248 Aldo/keto reductase family J5J84_10265 PF00543 Nitrogen regulatory protein P-II J5J84_10270 PF00924 Mechanosensitive ion channel J5J84_10275 PF14698 Argininosuccinate lyase C-terminal J5J84_10275 PF00206 Lyase J5J84_10285 PF01804 Penicillin amidase J5J84_10290 PF01266 FAD dependent oxidoreductase J5J84_10300 PF05958 tRNA (Uracil-5-)-methyltransferase J5J84_10305 PF01551 Peptidase family M23 J5J84_10305 PF01476 LysM domain J5J84_10315 PF01975 Survival protein SurE J5J84_10320 PF02660 Glycerol-3-phosphate acyltransferase J5J84_10325 PF00814 Glycoprotease family J5J84_10330 PF00860 Permease family J5J84_10335 PF00085 Thioredoxin J5J84_10350 PF01205 Uncharacterized protein family UPF0029 J5J84_10355 PF12848 ABC transporter J5J84_10355 PF00005 ABC transporter J5J84_10360 PF17676 LD-carboxypeptidase C-terminal domain J5J84_10360 PF02016 LD-carboxypeptidase N-terminal domain J5J84_10365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J5J84_10370 PF00005 ABC transporter J5J84_10375 PF01061 ABC-2 type transporter J5J84_10380 PF00672 HAMP domain J5J84_10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_10380 PF17200 Single Cache domain 2 J5J84_10385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_10385 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5J84_10390 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5J84_10395 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_10400 PF01266 FAD dependent oxidoreductase J5J84_10410 PF05690 Thiazole biosynthesis protein ThiG J5J84_10415 PF00205 Thiamine pyrophosphate enzyme, central domain J5J84_10415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5J84_10415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5J84_10420 PF07728 AAA domain (dynein-related subfamily) J5J84_10420 PF08406 CbbQ/NirQ/NorQ C-terminal J5J84_10420 PF12556 Cobaltochelatase CobS subunit N terminal J5J84_10430 PF09339 IclR helix-turn-helix domain J5J84_10430 PF01614 Bacterial transcriptional regulator J5J84_10435 PF01515 Phosphate acetyl/butaryl transferase J5J84_10440 PF01925 Sulfite exporter TauE/SafE J5J84_10450 PF04461 Protein of unknown function (DUF520) J5J84_10455 PF00501 AMP-binding enzyme J5J84_10455 PF13193 AMP-binding enzyme C-terminal domain J5J84_10460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J5J84_10465 PF00117 Glutamine amidotransferase class-I J5J84_10465 PF00958 GMP synthase C terminal domain J5J84_10465 PF02540 NAD synthase J5J84_10470 PF12833 Helix-turn-helix domain J5J84_10475 PF13593 SBF-like CPA transporter family (DUF4137) J5J84_10480 PF08534 Redoxin J5J84_10485 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J5J84_10490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_10500 PF01416 tRNA pseudouridine synthase J5J84_10510 PF01118 Semialdehyde dehydrogenase, NAD binding domain J5J84_10510 PF02774 Semialdehyde dehydrogenase, dimerisation domain J5J84_10515 PF00180 Isocitrate/isopropylmalate dehydrogenase J5J84_10520 PF00694 Aconitase C-terminal domain J5J84_10525 PF00330 Aconitase family (aconitate hydratase) J5J84_10530 PF00155 Aminotransferase class I and II J5J84_10530 PF00392 Bacterial regulatory proteins, gntR family J5J84_10535 PF02627 Carboxymuconolactone decarboxylase family J5J84_10545 PF00072 Response regulator receiver domain J5J84_10545 PF00196 Bacterial regulatory proteins, luxR family J5J84_10550 PF00072 Response regulator receiver domain J5J84_10550 PF13426 PAS domain J5J84_10550 PF08448 PAS fold J5J84_10550 PF00512 His Kinase A (phospho-acceptor) domain J5J84_10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_10560 PF01264 Chorismate synthase J5J84_10565 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J5J84_10575 PF03631 Virulence factor BrkB J5J84_10585 PF01207 Dihydrouridine synthase (Dus) J5J84_10590 PF01636 Phosphotransferase enzyme family J5J84_10610 PF00437 Type II/IV secretion system protein J5J84_10615 PF04972 BON domain J5J84_10615 PF00263 Bacterial type II and III secretion system protein J5J84_10615 PF13629 Pilus formation protein N terminal region J5J84_10645 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5J84_10650 PF00719 Inorganic pyrophosphatase J5J84_10660 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J5J84_10670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J5J84_10670 PF03900 Porphobilinogen deaminase, C-terminal domain J5J84_10675 PF03741 Integral membrane protein TerC family J5J84_10680 PF02629 CoA binding domain J5J84_10680 PF00549 CoA-ligase J5J84_10685 PF08442 ATP-grasp domain J5J84_10685 PF00549 CoA-ligase J5J84_10695 PF01717 Cobalamin-independent synthase, Catalytic domain J5J84_10695 PF08267 Cobalamin-independent synthase, N-terminal domain J5J84_10700 PF03466 LysR substrate binding domain J5J84_10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_10705 PF02631 RecX family J5J84_10710 PF00154 recA bacterial DNA recombination protein J5J84_10715 PF00486 Transcriptional regulatory protein, C terminal J5J84_10715 PF00072 Response regulator receiver domain J5J84_10720 PF00512 His Kinase A (phospho-acceptor) domain J5J84_10720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_10725 PF08946 Osmosensory transporter coiled coil J5J84_10725 PF00083 Sugar (and other) transporter J5J84_10730 PF04381 Putative exonuclease, RdgC J5J84_10740 PF00501 AMP-binding enzyme J5J84_10740 PF13193 AMP-binding enzyme C-terminal domain J5J84_10745 PF00378 Enoyl-CoA hydratase/isomerase J5J84_10750 PF04341 Protein of unknown function, DUF485 J5J84_10755 PF00474 Sodium:solute symporter family J5J84_10760 PF00171 Aldehyde dehydrogenase family J5J84_10765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J5J84_10765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J5J84_10780 PF00905 Penicillin binding protein transpeptidase domain J5J84_10780 PF00912 Transglycosylase J5J84_10785 PF00207 Alpha-2-macroglobulin family J5J84_10785 PF07703 Alpha-2-macroglobulin bait region domain J5J84_10785 PF01835 MG2 domain J5J84_10795 PF03060 Nitronate monooxygenase J5J84_10800 PF04055 Radical SAM superfamily J5J84_10800 PF06969 HemN C-terminal domain J5J84_10805 PF13244 Domain of unknown function (DUF4040) J5J84_10805 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J5J84_10805 PF00361 Proton-conducting membrane transporter J5J84_10805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J5J84_10810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J5J84_10815 PF00361 Proton-conducting membrane transporter J5J84_10825 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J5J84_10840 PF00083 Sugar (and other) transporter J5J84_10840 PF07690 Major Facilitator Superfamily J5J84_10850 PF00037 4Fe-4S binding domain J5J84_10850 PF11953 Domain of unknown function (DUF3470) J5J84_10865 PF02705 K+ potassium transporter J5J84_10870 PF00512 His Kinase A (phospho-acceptor) domain J5J84_10870 PF08521 Two-component sensor kinase N-terminal J5J84_10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_10875 PF00072 Response regulator receiver domain J5J84_10875 PF00486 Transcriptional regulatory protein, C terminal J5J84_10880 PF02472 Biopolymer transport protein ExbD/TolR J5J84_10885 PF01618 MotA/TolQ/ExbB proton channel family J5J84_10895 PF00005 ABC transporter J5J84_10895 PF12857 TOBE-like domain J5J84_10900 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_10905 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_10925 PF00313 'Cold-shock' DNA-binding domain J5J84_10935 PF00216 Bacterial DNA-binding protein J5J84_10940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5J84_10940 PF14824 Sirohaem biosynthesis protein central J5J84_10940 PF10414 Sirohaem synthase dimerisation region J5J84_10945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_10955 PF17805 AsnC-like ligand binding domain J5J84_10955 PF13404 AsnC-type helix-turn-helix domain J5J84_10960 PF17805 AsnC-like ligand binding domain J5J84_10960 PF13404 AsnC-type helix-turn-helix domain J5J84_10965 PF13404 AsnC-type helix-turn-helix domain J5J84_10965 PF17805 AsnC-like ligand binding domain J5J84_10970 PF13186 Iron-sulfur cluster-binding domain J5J84_10970 PF04055 Radical SAM superfamily J5J84_10975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5J84_10975 PF14824 Sirohaem biosynthesis protein central J5J84_10975 PF10414 Sirohaem synthase dimerisation region J5J84_10980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_10985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_10990 PF00392 Bacterial regulatory proteins, gntR family J5J84_10990 PF00155 Aminotransferase class I and II J5J84_10995 PF01053 Cys/Met metabolism PLP-dependent enzyme J5J84_11000 PF08032 RNA 2'-O ribose methyltransferase substrate binding J5J84_11000 PF00588 SpoU rRNA Methylase family J5J84_11005 PF00575 S1 RNA binding domain J5J84_11005 PF08206 Ribonuclease B OB domain J5J84_11005 PF08461 Ribonuclease R winged-helix domain J5J84_11005 PF17876 Cold shock domain J5J84_11005 PF00773 RNB domain J5J84_11020 PF00356 Bacterial regulatory proteins, lacI family J5J84_11025 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_11030 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_11035 PF00005 ABC transporter J5J84_11050 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain J5J84_11050 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain J5J84_11055 PF07005 Sugar-binding N-terminal domain J5J84_11055 PF17042 Nucleotide-binding C-terminal domain J5J84_11070 PF08021 Siderophore-interacting FAD-binding domain J5J84_11070 PF04954 Siderophore-interacting protein J5J84_11085 PF01494 FAD binding domain J5J84_11090 PF06750 Bacterial Peptidase A24 N-terminal domain J5J84_11090 PF01478 Type IV leader peptidase family J5J84_11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_11100 PF03466 LysR substrate binding domain J5J84_11105 PF00005 ABC transporter J5J84_11105 PF08402 TOBE domain J5J84_11110 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_11115 PF13419 Haloacid dehalogenase-like hydrolase J5J84_11125 PF01266 FAD dependent oxidoreductase J5J84_11140 PF01738 Dienelactone hydrolase family J5J84_11145 PF12843 Putative quorum-sensing-regulated virulence factor J5J84_11150 PF02798 Glutathione S-transferase, N-terminal domain J5J84_11155 PF02678 Pirin J5J84_11155 PF05726 Pirin C-terminal cupin domain J5J84_11165 PF00795 Carbon-nitrogen hydrolase J5J84_11170 PF07690 Major Facilitator Superfamily J5J84_11175 PF07690 Major Facilitator Superfamily J5J84_11180 PF02311 AraC-like ligand binding domain J5J84_11180 PF12833 Helix-turn-helix domain J5J84_11185 PF03594 Benzoate membrane transport protein J5J84_11195 PF03746 LamB/YcsF family J5J84_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_11200 PF03466 LysR substrate binding domain J5J84_11205 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_11205 PF01799 [2Fe-2S] binding domain J5J84_11210 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J5J84_11210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5J84_11220 PF01979 Amidohydrolase family J5J84_11225 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family J5J84_11230 PF00486 Transcriptional regulatory protein, C terminal J5J84_11230 PF00072 Response regulator receiver domain J5J84_11235 PF00672 HAMP domain J5J84_11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_11235 PF00512 His Kinase A (phospho-acceptor) domain J5J84_11240 PF04539 Sigma-70 region 3 J5J84_11240 PF04546 Sigma-70, non-essential region J5J84_11240 PF03979 Sigma-70 factor, region 1.1 J5J84_11240 PF00140 Sigma-70 factor, region 1.2 J5J84_11240 PF04542 Sigma-70 region 2 J5J84_11240 PF04545 Sigma-70, region 4 J5J84_11245 PF10410 DnaB-helicase binding domain of primase J5J84_11245 PF08275 DNA primase catalytic core, N-terminal domain J5J84_11245 PF08278 DNA primase DnaG DnaB-binding J5J84_11245 PF01807 CHC2 zinc finger J5J84_11250 PF01165 Ribosomal protein S21 J5J84_11255 PF00156 Phosphoribosyl transferase domain J5J84_11260 PF00709 Adenylosuccinate synthetase J5J84_11265 PF13393 Histidyl-tRNA synthetase J5J84_11270 PF01145 SPFH domain / Band 7 family J5J84_11275 PF01145 SPFH domain / Band 7 family J5J84_11275 PF12221 Bacterial membrane protein N terminal J5J84_11280 PF16360 GTP-binding GTPase Middle Region J5J84_11280 PF13167 GTP-binding GTPase N-terminal J5J84_11280 PF01926 50S ribosome-binding GTPase J5J84_11285 PF17209 Hfq protein J5J84_11290 PF00155 Aminotransferase class I and II J5J84_11295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J5J84_11295 PF01926 50S ribosome-binding GTPase J5J84_11300 PF13360 PQQ-like domain J5J84_11305 PF09976 Tetratricopeptide repeat-like domain J5J84_11310 PF03129 Anticodon binding domain J5J84_11310 PF13393 Histidyl-tRNA synthetase J5J84_11315 PF04551 GcpE protein J5J84_11325 PF04055 Radical SAM superfamily J5J84_11330 PF00334 Nucleoside diphosphate kinase J5J84_11335 PF08264 Anticodon-binding domain of tRNA J5J84_11335 PF00133 tRNA synthetases class I (I, L, M and V) J5J84_11335 PF10458 Valyl tRNA synthetase tRNA binding arm J5J84_11340 PF03466 LysR substrate binding domain J5J84_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_11345 PF00892 EamA-like transporter family J5J84_11350 PF01746 tRNA (Guanine-1)-methyltransferase J5J84_11355 PF01782 RimM N-terminal domain J5J84_11360 PF00886 Ribosomal protein S16 J5J84_11365 PF01206 Sulfurtransferase TusA J5J84_11370 PF02272 DHHA1 domain J5J84_11370 PF01411 tRNA synthetases class II (A) J5J84_11370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5J84_11385 PF00576 HIUase/Transthyretin family J5J84_11415 PF13416 Bacterial extracellular solute-binding protein J5J84_11420 PF01266 FAD dependent oxidoreductase J5J84_11425 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_11425 PF00175 Oxidoreductase NAD-binding domain J5J84_11425 PF00970 Oxidoreductase FAD-binding domain J5J84_11430 PF00521 DNA gyrase/topoisomerase IV, subunit A J5J84_11435 PF00204 DNA gyrase B J5J84_11435 PF00986 DNA gyrase B subunit, carboxyl terminus J5J84_11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_11435 PF01751 Toprim domain J5J84_11440 PF00085 Thioredoxin J5J84_11445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5J84_11445 PF07497 Rho termination factor, RNA-binding domain J5J84_11445 PF07498 Rho termination factor, N-terminal domain J5J84_11450 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J5J84_11450 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J5J84_11460 PF00866 Ring hydroxylating beta subunit J5J84_11465 PF00355 Rieske [2Fe-2S] domain J5J84_11465 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J5J84_11470 PF00005 ABC transporter J5J84_11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5J84_11475 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_11475 PF12911 N-terminal TM domain of oligopeptide transport permease C J5J84_11480 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_11485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5J84_11495 PF07729 FCD domain J5J84_11495 PF00392 Bacterial regulatory proteins, gntR family J5J84_11510 PF03710 Glutamate-ammonia ligase adenylyltransferase J5J84_11510 PF08335 GlnD PII-uridylyltransferase J5J84_11515 PF02677 Epoxyqueuosine reductase QueH J5J84_11520 PF00004 ATPase family associated with various cellular activities (AAA) J5J84_11520 PF07724 AAA domain (Cdc48 subfamily) J5J84_11520 PF17871 AAA lid domain J5J84_11520 PF02861 Clp amino terminal domain, pathogenicity island component J5J84_11520 PF10431 C-terminal, D2-small domain, of ClpB protein J5J84_11525 PF00027 Cyclic nucleotide-binding domain J5J84_11525 PF13545 Crp-like helix-turn-helix domain J5J84_11540 PF12801 4Fe-4S binding domain J5J84_11540 PF13746 4Fe-4S dicluster domain J5J84_11540 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J5J84_11545 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J5J84_11545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_11560 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5J84_11570 PF00403 Heavy-metal-associated domain J5J84_11575 PF00463 Isocitrate lyase family J5J84_11580 PF14489 QueF-like protein J5J84_11580 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J5J84_11590 PF01066 CDP-alcohol phosphatidyltransferase J5J84_11595 PF01541 GIY-YIG catalytic domain J5J84_11595 PF02151 UvrB/uvrC motif J5J84_11595 PF08459 UvrC Helix-hairpin-helix N-terminal J5J84_11600 PF00933 Glycosyl hydrolase family 3 N terminal domain J5J84_11605 PF01648 4'-phosphopantetheinyl transferase superfamily J5J84_11610 PF14535 AMP-binding enzyme C-terminal domain J5J84_11610 PF00501 AMP-binding enzyme J5J84_11615 PF03061 Thioesterase superfamily J5J84_11620 PF00378 Enoyl-CoA hydratase/isomerase J5J84_11625 PF00171 Aldehyde dehydrogenase family J5J84_11630 PF00970 Oxidoreductase FAD-binding domain J5J84_11630 PF00175 Oxidoreductase NAD-binding domain J5J84_11630 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_11635 PF01883 Iron-sulfur cluster assembly protein J5J84_11640 PF05138 Phenylacetic acid catabolic protein J5J84_11645 PF06243 Phenylacetic acid degradation B J5J84_11650 PF05138 Phenylacetic acid catabolic protein J5J84_11655 PF00929 Exonuclease J5J84_11660 PF01435 Peptidase family M48 J5J84_11660 PF16491 CAAX prenyl protease N-terminal, five membrane helices J5J84_11665 PF03193 RsgA GTPase J5J84_11675 PF01245 Ribosomal protein L19 J5J84_11685 PF03099 Biotin/lipoate A/B protein ligase family J5J84_11685 PF10437 Bacterial lipoate protein ligase C-terminus J5J84_11695 PF00578 AhpC/TSA family J5J84_11695 PF10417 C-terminal domain of 1-Cys peroxiredoxin J5J84_11700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_11700 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_11700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_11700 PF12806 Acetyl-CoA dehydrogenase C-terminal like J5J84_11705 PF01012 Electron transfer flavoprotein domain J5J84_11705 PF00766 Electron transfer flavoprotein FAD-binding domain J5J84_11710 PF01012 Electron transfer flavoprotein domain J5J84_11715 PF00850 Histone deacetylase domain J5J84_11720 PF13406 Transglycosylase SLT domain J5J84_11725 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_11730 PF10531 SLBB domain J5J84_11735 PF01370 NAD dependent epimerase/dehydratase family J5J84_11740 PF00294 pfkB family carbohydrate kinase J5J84_11745 PF18073 Rubredoxin metal binding domain J5J84_11755 PF00216 Bacterial DNA-binding protein J5J84_11760 PF00575 S1 RNA binding domain J5J84_11765 PF02224 Cytidylate kinase J5J84_11770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J5J84_11775 PF02153 Prephenate dehydrogenase J5J84_11780 PF01842 ACT domain J5J84_11780 PF01817 Chorismate mutase type II J5J84_11780 PF00800 Prephenate dehydratase J5J84_11785 PF00266 Aminotransferase class-V J5J84_11790 PF03989 DNA gyrase C-terminal domain, beta-propeller J5J84_11790 PF00521 DNA gyrase/topoisomerase IV, subunit A J5J84_11795 PF00691 OmpA family J5J84_11805 PF13419 Haloacid dehalogenase-like hydrolase J5J84_11810 PF03466 LysR substrate binding domain J5J84_11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_11815 PF07690 Major Facilitator Superfamily J5J84_11820 PF00037 4Fe-4S binding domain J5J84_11820 PF11953 Domain of unknown function (DUF3470) J5J84_11830 PF07715 TonB-dependent Receptor Plug Domain J5J84_11830 PF00593 TonB dependent receptor J5J84_11845 PF00199 Catalase J5J84_11845 PF06628 Catalase-related immune-responsive J5J84_11845 PF18011 C-terminal domain found in long catalases J5J84_11855 PF08713 DNA alkylation repair enzyme J5J84_11865 PF00155 Aminotransferase class I and II J5J84_11870 PF03466 LysR substrate binding domain J5J84_11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_11875 PF01042 Endoribonuclease L-PSP J5J84_11880 PF00440 Bacterial regulatory proteins, tetR family J5J84_11900 PF01810 LysE type translocator J5J84_11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_11905 PF03466 LysR substrate binding domain J5J84_11910 PF00155 Aminotransferase class I and II J5J84_11910 PF00392 Bacterial regulatory proteins, gntR family J5J84_11935 PF02798 Glutathione S-transferase, N-terminal domain J5J84_11935 PF00043 Glutathione S-transferase, C-terminal domain J5J84_11945 PF00375 Sodium:dicarboxylate symporter family J5J84_11950 PF01810 LysE type translocator J5J84_11970 PF00474 Sodium:solute symporter family J5J84_11975 PF00072 Response regulator receiver domain J5J84_11975 PF00196 Bacterial regulatory proteins, luxR family J5J84_11980 PF00512 His Kinase A (phospho-acceptor) domain J5J84_11980 PF01627 Hpt domain J5J84_11980 PF00072 Response regulator receiver domain J5J84_11980 PF00672 HAMP domain J5J84_11980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_11985 PF01747 ATP-sulfurylase J5J84_11985 PF14306 PUA-like domain J5J84_11990 PF17284 Spermidine synthase tetramerisation domain J5J84_11995 PF08521 Two-component sensor kinase N-terminal J5J84_11995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_11995 PF00512 His Kinase A (phospho-acceptor) domain J5J84_12000 PF00486 Transcriptional regulatory protein, C terminal J5J84_12000 PF00072 Response regulator receiver domain J5J84_12005 PF08447 PAS fold J5J84_12005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5J84_12010 PF01169 Uncharacterized protein family UPF0016 J5J84_12020 PF03466 LysR substrate binding domain J5J84_12020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_12025 PF02525 Flavodoxin-like fold J5J84_12030 PF00925 GTP cyclohydrolase II J5J84_12045 PF03109 ABC1 family J5J84_12050 PF04228 Putative neutral zinc metallopeptidase J5J84_12065 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J5J84_12070 PF01047 MarR family J5J84_12075 PF00543 Nitrogen regulatory protein P-II J5J84_12080 PF00909 Ammonium Transporter Family J5J84_12085 PF01322 Cytochrome C' J5J84_12090 PF00206 Lyase J5J84_12090 PF08328 Adenylosuccinate lyase C-terminal J5J84_12095 PF13417 Glutathione S-transferase, N-terminal domain J5J84_12095 PF00043 Glutathione S-transferase, C-terminal domain J5J84_12100 PF01925 Sulfite exporter TauE/SafE J5J84_12110 PF01565 FAD binding domain J5J84_12110 PF02913 FAD linked oxidases, C-terminal domain J5J84_12115 PF00793 DAHP synthetase I family J5J84_12120 PF04328 Selenoprotein, putative J5J84_12125 PF13722 5TM C-terminal transporter carbon starvation CstA J5J84_12125 PF02554 Carbon starvation protein CstA J5J84_12130 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_12135 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_12140 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_12145 PF00005 ABC transporter J5J84_12150 PF00205 Thiamine pyrophosphate enzyme, central domain J5J84_12150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5J84_12150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5J84_12155 PF00171 Aldehyde dehydrogenase family J5J84_12160 PF01958 Domain of unknown function DUF108 J5J84_12160 PF03447 Homoserine dehydrogenase, NAD binding domain J5J84_12170 PF12697 Alpha/beta hydrolase family J5J84_12170 PF08241 Methyltransferase domain J5J84_12175 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_12180 PF00005 ABC transporter J5J84_12195 PF13609 Gram-negative porin J5J84_12200 PF09339 IclR helix-turn-helix domain J5J84_12200 PF01614 Bacterial transcriptional regulator J5J84_12210 PF05721 Phytanoyl-CoA dioxygenase (PhyH) J5J84_12215 PF06339 Ectoine synthase J5J84_12220 PF00202 Aminotransferase class-III J5J84_12225 PF00583 Acetyltransferase (GNAT) family J5J84_12230 PF01047 MarR family J5J84_12235 PF00892 EamA-like transporter family J5J84_12240 PF01523 Putative modulator of DNA gyrase J5J84_12245 PF00816 H-NS histone family J5J84_12255 PF11940 Domain of unknown function (DUF3458) Ig-like fold J5J84_12255 PF01433 Peptidase family M1 domain J5J84_12255 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J5J84_12260 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J5J84_12265 PF00107 Zinc-binding dehydrogenase J5J84_12265 PF08240 Alcohol dehydrogenase GroES-like domain J5J84_12275 PF00180 Isocitrate/isopropylmalate dehydrogenase J5J84_12280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5J84_12285 PF05872 Bacterial protein of unknown function (DUF853) J5J84_12290 PF01709 Transcriptional regulator J5J84_12295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J5J84_12295 PF02843 Phosphoribosylglycinamide synthetase, C domain J5J84_12295 PF02844 Phosphoribosylglycinamide synthetase, N domain J5J84_12300 PF01218 Coproporphyrinogen III oxidase J5J84_12305 PF01467 Cytidylyltransferase-like J5J84_12315 PF02590 Predicted SPOUT methyltransferase J5J84_12320 PF02545 Maf-like protein J5J84_12325 PF13098 Thioredoxin-like domain J5J84_12340 PF01253 Translation initiation factor SUI1 J5J84_12350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5J84_12350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5J84_12355 PF02798 Glutathione S-transferase, N-terminal domain J5J84_12355 PF14497 Glutathione S-transferase, C-terminal domain J5J84_12360 PF02401 LytB protein J5J84_12365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5J84_12370 PF04002 RadC-like JAB domain J5J84_12375 PF01418 Helix-turn-helix domain, rpiR family J5J84_12375 PF01380 SIS domain J5J84_12380 PF00083 Sugar (and other) transporter J5J84_12390 PF07690 Major Facilitator Superfamily J5J84_12395 PF01197 Ribosomal protein L31 J5J84_12405 PF01554 MatE J5J84_12410 PF00005 ABC transporter J5J84_12410 PF00571 CBS domain J5J84_12415 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_12430 PF07690 Major Facilitator Superfamily J5J84_12435 PF00830 Ribosomal L28 family J5J84_12440 PF00471 Ribosomal protein L33 J5J84_12445 PF08264 Anticodon-binding domain of tRNA J5J84_12445 PF00133 tRNA synthetases class I (I, L, M and V) J5J84_12445 PF13603 Leucyl-tRNA synthetase, Domain 2 J5J84_12445 PF09334 tRNA synthetases class I (M) J5J84_12455 PF14840 Processivity clamp loader gamma complex DNA pol III C-term J5J84_12455 PF06144 DNA polymerase III, delta subunit J5J84_12460 PF00171 Aldehyde dehydrogenase family J5J84_12465 PF03653 Uncharacterised protein family (UPF0093) J5J84_12480 PF01430 Hsp33 protein J5J84_12490 PF04977 Septum formation initiator J5J84_12495 PF00113 Enolase, C-terminal TIM barrel domain J5J84_12495 PF03952 Enolase, N-terminal domain J5J84_12505 PF07690 Major Facilitator Superfamily J5J84_12520 PF00793 DAHP synthetase I family J5J84_12525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5J84_12530 PF00117 Glutamine amidotransferase class-I J5J84_12530 PF06418 CTP synthase N-terminus J5J84_12535 PF01321 Creatinase/Prolidase N-terminal domain J5J84_12535 PF00557 Metallopeptidase family M24 J5J84_12540 PF01144 Coenzyme A transferase J5J84_12545 PF01144 Coenzyme A transferase J5J84_12560 PF00892 EamA-like transporter family J5J84_12565 PF16177 Acetyl-coenzyme A synthetase N-terminus J5J84_12565 PF00501 AMP-binding enzyme J5J84_12565 PF13193 AMP-binding enzyme C-terminal domain J5J84_12575 PF00877 NlpC/P60 family J5J84_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_12585 PF03466 LysR substrate binding domain J5J84_12590 PF00171 Aldehyde dehydrogenase family J5J84_12595 PF03466 LysR substrate binding domain J5J84_12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_12605 PF02789 Cytosol aminopeptidase family, N-terminal domain J5J84_12605 PF00883 Cytosol aminopeptidase family, catalytic domain J5J84_12615 PF01027 Inhibitor of apoptosis-promoting Bax1 J5J84_12620 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_12635 PF02565 Recombination protein O C terminal J5J84_12635 PF11967 Recombination protein O N terminal J5J84_12640 PF07650 KH domain J5J84_12640 PF01926 50S ribosome-binding GTPase J5J84_12645 PF00035 Double-stranded RNA binding motif J5J84_12645 PF14622 Ribonuclease-III-like J5J84_12650 PF10502 Signal peptidase, peptidase S26 J5J84_12655 PF06421 GTP-binding protein LepA C-terminus J5J84_12655 PF00009 Elongation factor Tu GTP binding domain J5J84_12655 PF00679 Elongation factor G C-terminus J5J84_12655 PF03144 Elongation factor Tu domain 2 J5J84_12660 PF13180 PDZ domain J5J84_12675 PF04542 Sigma-70 region 2 J5J84_12675 PF08281 Sigma-70, region 4 J5J84_12680 PF00109 Beta-ketoacyl synthase, N-terminal domain J5J84_12680 PF02801 Beta-ketoacyl synthase, C-terminal domain J5J84_12685 PF00550 Phosphopantetheine attachment site J5J84_12695 PF00698 Acyl transferase domain J5J84_12700 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J5J84_12700 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J5J84_12705 PF02504 Fatty acid synthesis protein J5J84_12710 PF01783 Ribosomal L32p protein family J5J84_12715 PF02620 Large ribosomal RNA subunit accumulation protein YceD J5J84_12720 PF02545 Maf-like protein J5J84_12725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5J84_12730 PF01510 N-acetylmuramoyl-L-alanine amidase J5J84_12735 PF01794 Ferric reductase like transmembrane component J5J84_12740 PF00174 Oxidoreductase molybdopterin binding domain J5J84_12745 PF13419 Haloacid dehalogenase-like hydrolase J5J84_12750 PF00849 RNA pseudouridylate synthase J5J84_12750 PF01479 S4 domain J5J84_12755 PF12111 Polyribonucleotide phosphorylase C terminal J5J84_12755 PF10150 Ribonuclease E/G family J5J84_12755 PF00575 S1 RNA binding domain J5J84_12760 PF01039 Carboxyl transferase domain J5J84_12760 PF17848 Acetyl-coA carboxylase zinc finger domain J5J84_12765 PF00290 Tryptophan synthase alpha chain J5J84_12770 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_12775 PF04607 Region found in RelA / SpoT proteins J5J84_12775 PF02824 TGS domain J5J84_12775 PF13291 ACT domain J5J84_12785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J5J84_12785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J5J84_12790 PF00037 4Fe-4S binding domain J5J84_12790 PF11953 Domain of unknown function (DUF3470) J5J84_12800 PF04060 Putative Fe-S cluster J5J84_12805 PF00633 Helix-hairpin-helix motif J5J84_12805 PF00730 HhH-GPD superfamily base excision DNA repair protein J5J84_12805 PF10576 Iron-sulfur binding domain of endonuclease III J5J84_12810 PF00005 ABC transporter J5J84_12815 PF03922 OmpW family J5J84_12820 PF00005 ABC transporter J5J84_12825 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5J84_12825 PF00005 ABC transporter J5J84_12840 PF01641 SelR domain J5J84_12845 PF04279 Intracellular septation protein A J5J84_12860 PF00533 BRCA1 C Terminus (BRCT) domain J5J84_12860 PF01653 NAD-dependent DNA ligase adenylation domain J5J84_12860 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J5J84_12860 PF12826 Helix-hairpin-helix motif J5J84_12860 PF03120 NAD-dependent DNA ligase OB-fold domain J5J84_12870 PF06470 SMC proteins Flexible Hinge Domain J5J84_12870 PF02463 RecF/RecN/SMC N terminal domain J5J84_12875 PF07690 Major Facilitator Superfamily J5J84_12880 PF03167 Uracil DNA glycosylase superfamily J5J84_12885 PF00814 Glycoprotease family J5J84_12890 PF00486 Transcriptional regulatory protein, C terminal J5J84_12890 PF00072 Response regulator receiver domain J5J84_12895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_12895 PF00512 His Kinase A (phospho-acceptor) domain J5J84_12895 PF00672 HAMP domain J5J84_12900 PF02542 YgbB family J5J84_12905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J5J84_12910 PF17757 UvrB interaction domain J5J84_12910 PF03461 TRCF domain J5J84_12910 PF02559 CarD-like/TRCF domain J5J84_12910 PF00270 DEAD/DEAH box helicase J5J84_12910 PF00271 Helicase conserved C-terminal domain J5J84_12920 PF03060 Nitronate monooxygenase J5J84_12930 PF00361 Proton-conducting membrane transporter J5J84_12935 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J5J84_12935 PF00361 Proton-conducting membrane transporter J5J84_12940 PF00361 Proton-conducting membrane transporter J5J84_12940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J5J84_12945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J5J84_12950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J5J84_12955 PF12838 4Fe-4S dicluster domain J5J84_12960 PF00146 NADH dehydrogenase J5J84_12965 PF00384 Molybdopterin oxidoreductase J5J84_12965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J5J84_12965 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J5J84_12970 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J5J84_12970 PF10531 SLBB domain J5J84_12970 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J5J84_12980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J5J84_12985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J5J84_12990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J5J84_12995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J5J84_13005 PF13609 Gram-negative porin J5J84_13015 PF03840 Preprotein translocase SecG subunit J5J84_13020 PF00121 Triosephosphate isomerase J5J84_13025 PF00107 Zinc-binding dehydrogenase J5J84_13025 PF08240 Alcohol dehydrogenase GroES-like domain J5J84_13040 PF07969 Amidohydrolase family J5J84_13045 PF00013 KH domain J5J84_13045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J5J84_13045 PF01138 3' exoribonuclease family, domain 1 J5J84_13045 PF03725 3' exoribonuclease family, domain 2 J5J84_13045 PF00575 S1 RNA binding domain J5J84_13050 PF00312 Ribosomal protein S15 J5J84_13055 PF01066 CDP-alcohol phosphatidyltransferase J5J84_13060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J5J84_13060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J5J84_13065 PF10369 Small subunit of acetolactate synthase J5J84_13070 PF00205 Thiamine pyrophosphate enzyme, central domain J5J84_13070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5J84_13070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5J84_13075 PF12805 FUSC-like inner membrane protein yccS J5J84_13080 PF03883 Peroxide stress protein YaaA J5J84_13095 PF00959 Phage lysozyme J5J84_13105 PF01757 Acyltransferase family J5J84_13110 PF02413 Caudovirales tail fibre assembly protein, lambda gpK J5J84_13230 PF03592 Terminase small subunit J5J84_13365 PF13356 Arm DNA-binding domain J5J84_13365 PF14659 Phage integrase, N-terminal SAM-like domain J5J84_13365 PF00589 Phage integrase family J5J84_13385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5J84_13385 PF02403 Seryl-tRNA synthetase N-terminal domain J5J84_13390 PF00004 ATPase family associated with various cellular activities (AAA) J5J84_13390 PF16193 AAA C-terminal domain J5J84_13390 PF12002 MgsA AAA+ ATPase C terminal J5J84_13395 PF03548 Outer membrane lipoprotein carrier protein LolA J5J84_13400 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J5J84_13400 PF17854 FtsK alpha domain J5J84_13400 PF01580 FtsK/SpoIIIE family J5J84_13400 PF09397 Ftsk gamma domain J5J84_13405 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_13425 PF07690 Major Facilitator Superfamily J5J84_13445 PF00135 Carboxylesterase family J5J84_13450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J5J84_13450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_13455 PF00180 Isocitrate/isopropylmalate dehydrogenase J5J84_13470 PF00034 Cytochrome c J5J84_13475 PF01434 Peptidase family M41 J5J84_13475 PF17862 AAA+ lid domain J5J84_13475 PF00004 ATPase family associated with various cellular activities (AAA) J5J84_13495 PF02954 Bacterial regulatory protein, Fis family J5J84_13495 PF00072 Response regulator receiver domain J5J84_13495 PF00158 Sigma-54 interaction domain J5J84_13525 PF00437 Type II/IV secretion system protein J5J84_13535 PF13629 Pilus formation protein N terminal region J5J84_13535 PF00263 Bacterial type II and III secretion system protein J5J84_13535 PF04972 BON domain J5J84_13565 PF08479 POTRA domain, ShlB-type J5J84_13565 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB J5J84_13595 PF00675 Insulinase (Peptidase family M16) J5J84_13595 PF05193 Peptidase M16 inactive domain J5J84_13600 PF00684 DnaJ central domain J5J84_13600 PF00226 DnaJ domain J5J84_13600 PF01556 DnaJ C terminal domain J5J84_13605 PF00012 Hsp70 protein J5J84_13610 PF01025 GrpE J5J84_13615 PF00762 Ferrochelatase J5J84_13620 PF01628 HrcA protein C terminal domain J5J84_13620 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding J5J84_13625 PF01513 ATP-NAD kinase J5J84_13630 PF02463 RecF/RecN/SMC N terminal domain J5J84_13635 PF01475 Ferric uptake regulator family J5J84_13640 PF04355 SmpA / OmlA family J5J84_13645 PF01113 Dihydrodipicolinate reductase, N-terminus J5J84_13645 PF05173 Dihydrodipicolinate reductase, C-terminus J5J84_13660 PF00561 alpha/beta hydrolase fold J5J84_13665 PF00465 Iron-containing alcohol dehydrogenase J5J84_13670 PF07690 Major Facilitator Superfamily J5J84_13680 PF01565 FAD binding domain J5J84_13680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J5J84_13710 PF02321 Outer membrane efflux protein J5J84_13715 PF13533 Biotin-lipoyl like J5J84_13735 PF07715 TonB-dependent Receptor Plug Domain J5J84_13735 PF07660 Secretin and TonB N terminus short domain J5J84_13735 PF00593 TonB dependent receptor J5J84_13740 PF07690 Major Facilitator Superfamily J5J84_13750 PF00756 Putative esterase J5J84_13770 PF00465 Iron-containing alcohol dehydrogenase J5J84_13775 PF00005 ABC transporter J5J84_13780 PF00005 ABC transporter J5J84_13790 PF02653 Branched-chain amino acid transport system / permease component J5J84_13800 PF00171 Aldehyde dehydrogenase family J5J84_13805 PF01614 Bacterial transcriptional regulator J5J84_13805 PF09339 IclR helix-turn-helix domain J5J84_13810 PF00271 Helicase conserved C-terminal domain J5J84_13810 PF03880 DbpA RNA binding domain J5J84_13810 PF00270 DEAD/DEAH box helicase J5J84_13815 PF05973 Phage derived protein Gp49-like (DUF891) J5J84_13820 PF01381 Helix-turn-helix J5J84_13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_13825 PF03466 LysR substrate binding domain J5J84_13830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J5J84_13830 PF00355 Rieske [2Fe-2S] domain J5J84_13835 PF00866 Ring hydroxylating beta subunit J5J84_13840 PF00355 Rieske [2Fe-2S] domain J5J84_13845 PF00106 short chain dehydrogenase J5J84_13850 PF14759 Reductase C-terminal J5J84_13850 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_13855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J5J84_13860 PF12697 Alpha/beta hydrolase family J5J84_13865 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5J84_13870 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation J5J84_13870 PF01118 Semialdehyde dehydrogenase, NAD binding domain J5J84_13875 PF07836 DmpG-like communication domain J5J84_13875 PF00682 HMGL-like J5J84_13880 PF07690 Major Facilitator Superfamily J5J84_13895 PF01425 Amidase J5J84_13900 PF00392 Bacterial regulatory proteins, gntR family J5J84_13900 PF00155 Aminotransferase class I and II J5J84_13905 PF07690 Major Facilitator Superfamily J5J84_13925 PF11339 Protein of unknown function (DUF3141) J5J84_13930 PF02803 Thiolase, C-terminal domain J5J84_13930 PF00108 Thiolase, N-terminal domain J5J84_13935 PF00106 short chain dehydrogenase J5J84_13950 PF00005 ABC transporter J5J84_13955 PF13533 Biotin-lipoyl like J5J84_13960 PF02321 Outer membrane efflux protein J5J84_13965 PF00561 alpha/beta hydrolase fold J5J84_13965 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J5J84_13975 PF02592 Putative vitamin uptake transporter J5J84_13980 PF06508 Queuosine biosynthesis protein QueC J5J84_13985 PF00464 Serine hydroxymethyltransferase J5J84_13990 PF00266 Aminotransferase class-V J5J84_13995 PF00392 Bacterial regulatory proteins, gntR family J5J84_13995 PF00155 Aminotransferase class I and II J5J84_14000 PF00464 Serine hydroxymethyltransferase J5J84_14015 PF00117 Glutamine amidotransferase class-I J5J84_14020 PF08543 Phosphomethylpyrimidine kinase J5J84_14025 PF02028 BCCT, betaine/carnitine/choline family transporter J5J84_14030 PF00376 MerR family regulatory protein J5J84_14030 PF09278 MerR, DNA binding J5J84_14040 PF00873 AcrB/AcrD/AcrF family J5J84_14065 PF02293 AmiS/UreI family transporter J5J84_14085 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5J84_14090 PF00155 Aminotransferase class I and II J5J84_14090 PF00392 Bacterial regulatory proteins, gntR family J5J84_14100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_14100 PF03466 LysR substrate binding domain J5J84_14105 PF00202 Aminotransferase class-III J5J84_14110 PF01177 Asp/Glu/Hydantoin racemase J5J84_14115 PF02371 Transposase IS116/IS110/IS902 family J5J84_14115 PF01548 Transposase J5J84_14130 PF05506 Domain of unknown function (DUF756) J5J84_14130 PF04185 Phosphoesterase family J5J84_14145 PF00691 OmpA family J5J84_14145 PF01389 OmpA-like transmembrane domain J5J84_14150 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin J5J84_14150 PF03895 YadA-like membrane anchor domain J5J84_14150 PF05662 Coiled stalk of trimeric autotransporter adhesin J5J84_14150 PF13018 Extended Signal Peptide of Type V secretion system J5J84_14160 PF00239 Resolvase, N terminal domain J5J84_14160 PF02796 Helix-turn-helix domain of resolvase J5J84_14165 PF00482 Type II secretion system (T2SS), protein F J5J84_14170 PF00437 Type II/IV secretion system protein J5J84_14175 PF00263 Bacterial type II and III secretion system protein J5J84_14175 PF03958 Bacterial type II/III secretion system short domain J5J84_14200 PF11612 Type II secretion system (T2SS), protein J J5J84_14200 PF07963 Prokaryotic N-terminal methylation motif J5J84_14205 PF07963 Prokaryotic N-terminal methylation motif J5J84_14205 PF02501 Type II secretion system (T2SS), protein I J5J84_14210 PF07963 Prokaryotic N-terminal methylation motif J5J84_14215 PF08334 Type II secretion system (T2SS), protein G J5J84_14215 PF07963 Prokaryotic N-terminal methylation motif J5J84_14225 PF00478 IMP dehydrogenase / GMP reductase domain J5J84_14225 PF00571 CBS domain J5J84_14230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5J84_14235 PF00206 Lyase J5J84_14235 PF10415 Fumarase C C-terminus J5J84_14240 PF01047 MarR family J5J84_14255 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J5J84_14260 PF04376 Arginine-tRNA-protein transferase, N terminus J5J84_14260 PF04377 Arginine-tRNA-protein transferase, C terminus J5J84_14265 PF01180 Dihydroorotate dehydrogenase J5J84_14275 PF09339 IclR helix-turn-helix domain J5J84_14275 PF01614 Bacterial transcriptional regulator J5J84_14295 PF00270 DEAD/DEAH box helicase J5J84_14295 PF00271 Helicase conserved C-terminal domain J5J84_14315 PF00561 alpha/beta hydrolase fold J5J84_14320 PF01435 Peptidase family M48 J5J84_14340 PF01494 FAD binding domain J5J84_14345 PF01207 Dihydrouridine synthase (Dus) J5J84_14350 PF02954 Bacterial regulatory protein, Fis family J5J84_14355 PF01808 AICARFT/IMPCHase bienzyme J5J84_14355 PF02142 MGS-like domain J5J84_14360 PF02075 Crossover junction endodeoxyribonuclease RuvC J5J84_14365 PF01330 RuvA N terminal domain J5J84_14365 PF07499 RuvA, C-terminal domain J5J84_14370 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_14375 PF17864 RuvB AAA lid domain J5J84_14375 PF05491 RuvB C-terminal winged helix domain J5J84_14375 PF05496 Holliday junction DNA helicase RuvB P-loop domain J5J84_14385 PF01979 Amidohydrolase family J5J84_14395 PF03441 FAD binding domain of DNA photolyase J5J84_14395 PF00875 DNA photolyase J5J84_14435 PF00581 Rhodanese-like domain J5J84_14440 PF04143 Sulphur transport J5J84_14455 PF01625 Peptide methionine sulfoxide reductase J5J84_14460 PF00034 Cytochrome c J5J84_14465 PF01790 Prolipoprotein diacylglyceryl transferase J5J84_14490 PF01970 Tripartite tricarboxylate transporter TctA family J5J84_14500 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_14505 PF00005 ABC transporter J5J84_14505 PF08402 TOBE domain J5J84_14515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5J84_14515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5J84_14520 PF00512 His Kinase A (phospho-acceptor) domain J5J84_14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_14525 PF00486 Transcriptional regulatory protein, C terminal J5J84_14525 PF00072 Response regulator receiver domain J5J84_14530 PF00293 NUDIX domain J5J84_14535 PF03129 Anticodon binding domain J5J84_14535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5J84_14535 PF04073 Aminoacyl-tRNA editing domain J5J84_14540 PF03061 Thioesterase superfamily J5J84_14545 PF01618 MotA/TolQ/ExbB proton channel family J5J84_14550 PF02472 Biopolymer transport protein ExbD/TolR J5J84_14560 PF07676 WD40-like Beta Propeller Repeat J5J84_14560 PF04052 TolB amino-terminal domain J5J84_14565 PF00691 OmpA family J5J84_14575 PF00561 alpha/beta hydrolase fold J5J84_14590 PF01554 MatE J5J84_14595 PF02608 ABC transporter substrate-binding protein PnrA-like J5J84_14600 PF02653 Branched-chain amino acid transport system / permease component J5J84_14605 PF02653 Branched-chain amino acid transport system / permease component J5J84_14610 PF00005 ABC transporter J5J84_14620 PF01113 Dihydrodipicolinate reductase, N-terminus J5J84_14620 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain J5J84_14625 PF01810 LysE type translocator J5J84_14630 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J5J84_14630 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J5J84_14635 PF03466 LysR substrate binding domain J5J84_14635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_14640 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_14640 PF13192 Thioredoxin domain J5J84_14645 PF10417 C-terminal domain of 1-Cys peroxiredoxin J5J84_14645 PF00578 AhpC/TSA family J5J84_14650 PF00155 Aminotransferase class I and II J5J84_14655 PF00892 EamA-like transporter family J5J84_14660 PF01507 Phosphoadenosine phosphosulfate reductase family J5J84_14665 PF01507 Phosphoadenosine phosphosulfate reductase family J5J84_14670 PF00009 Elongation factor Tu GTP binding domain J5J84_14675 PF00324 Amino acid permease J5J84_14680 PF00171 Aldehyde dehydrogenase family J5J84_14685 PF01266 FAD dependent oxidoreductase J5J84_14690 PF07063 Domain of unknown function (DUF1338) J5J84_14695 PF03466 LysR substrate binding domain J5J84_14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_14700 PF00871 Acetokinase family J5J84_14705 PF01515 Phosphate acetyl/butaryl transferase J5J84_14715 PF03466 LysR substrate binding domain J5J84_14715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_14720 PF02678 Pirin J5J84_14720 PF17954 Quercetinase C-terminal cupin domain J5J84_14725 PF17158 Membrane-associated sensor, integral membrane domain J5J84_14725 PF00990 Diguanylate cyclase, GGDEF domain J5J84_14730 PF01425 Amidase J5J84_14735 PF07660 Secretin and TonB N terminus short domain J5J84_14735 PF00593 TonB dependent receptor J5J84_14735 PF07715 TonB-dependent Receptor Plug Domain J5J84_14740 PF04773 FecR protein J5J84_14740 PF16220 Domain of unknown function (DUF4880) J5J84_14745 PF08281 Sigma-70, region 4 J5J84_14745 PF04542 Sigma-70 region 2 J5J84_14750 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase J5J84_14755 PF00166 Chaperonin 10 Kd subunit J5J84_14760 PF00118 TCP-1/cpn60 chaperonin family J5J84_14765 PF01219 Prokaryotic diacylglycerol kinase J5J84_14770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J5J84_14780 PF02515 CoA-transferase family III J5J84_14785 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_14790 PF01614 Bacterial transcriptional regulator J5J84_14790 PF09339 IclR helix-turn-helix domain J5J84_14795 PF02464 Competence-damaged protein J5J84_14800 PF04608 Phosphatidylglycerophosphatase A J5J84_14805 PF00586 AIR synthase related protein, N-terminal domain J5J84_14805 PF02769 AIR synthase related protein, C-terminal domain J5J84_14810 PF01029 NusB family J5J84_14815 PF00885 6,7-dimethyl-8-ribityllumazine synthase J5J84_14820 PF00925 GTP cyclohydrolase II J5J84_14820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J5J84_14835 PF02881 SRP54-type protein, helical bundle domain J5J84_14835 PF00448 SRP54-type protein, GTPase domain J5J84_14845 PF01467 Cytidylyltransferase-like J5J84_14850 PF00037 4Fe-4S binding domain J5J84_14865 PF01053 Cys/Met metabolism PLP-dependent enzyme J5J84_14875 PF02423 Ornithine cyclodeaminase/mu-crystallin family J5J84_14880 PF07238 PilZ domain J5J84_14880 PF07317 Flagellar regulator YcgR J5J84_14895 PF02371 Transposase IS116/IS110/IS902 family J5J84_14895 PF01548 Transposase J5J84_14905 PF00857 Isochorismatase family J5J84_14915 PF00561 alpha/beta hydrolase fold J5J84_14920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_14920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5J84_14920 PF00034 Cytochrome c J5J84_14925 PF01799 [2Fe-2S] binding domain J5J84_14925 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_14930 PF00034 Cytochrome c J5J84_14930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5J84_14930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_14940 PF00005 ABC transporter J5J84_14945 PF00005 ABC transporter J5J84_14945 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5J84_14955 PF13458 Periplasmic binding protein J5J84_14965 PF01804 Penicillin amidase J5J84_14970 PF00990 Diguanylate cyclase, GGDEF domain J5J84_14970 PF17158 Membrane-associated sensor, integral membrane domain J5J84_14975 PF03466 LysR substrate binding domain J5J84_14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_14980 PF00884 Sulfatase J5J84_14980 PF16347 Domain of unknown function (DUF4976) J5J84_15000 PF00753 Metallo-beta-lactamase superfamily J5J84_15000 PF12706 Beta-lactamase superfamily domain J5J84_15005 PF00392 Bacterial regulatory proteins, gntR family J5J84_15005 PF07702 UTRA domain J5J84_15015 PF13091 PLD-like domain J5J84_15025 PF01256 Carbohydrate kinase J5J84_15025 PF03853 YjeF-related protein N-terminus J5J84_15030 PF02625 XdhC and CoxI family J5J84_15030 PF13478 XdhC Rossmann domain J5J84_15035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_15045 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_15050 PF00005 ABC transporter J5J84_15060 PF01799 [2Fe-2S] binding domain J5J84_15060 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_15065 PF03450 CO dehydrogenase flavoprotein C-terminal domain J5J84_15065 PF00941 FAD binding domain in molybdopterin dehydrogenase J5J84_15070 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5J84_15070 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J5J84_15075 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_15080 PF00355 Rieske [2Fe-2S] domain J5J84_15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5J84_15085 PF14759 Reductase C-terminal J5J84_15090 PF00355 Rieske [2Fe-2S] domain J5J84_15090 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J5J84_15105 PF02371 Transposase IS116/IS110/IS902 family J5J84_15105 PF01548 Transposase J5J84_15110 PF00857 Isochorismatase family J5J84_15120 PF00561 alpha/beta hydrolase fold J5J84_15130 PF01047 MarR family J5J84_15135 PF00005 ABC transporter J5J84_15140 PF01032 FecCD transport family J5J84_15150 PF00593 TonB dependent receptor J5J84_15150 PF07715 TonB-dependent Receptor Plug Domain J5J84_15155 PF02667 Short chain fatty acid transporter J5J84_15160 PF03466 LysR substrate binding domain J5J84_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_15165 PF01979 Amidohydrolase family J5J84_15170 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_15185 PF00929 Exonuclease J5J84_15190 PF00873 AcrB/AcrD/AcrF family J5J84_15195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5J84_15200 PF00075 RNase H J5J84_15205 PF08241 Methyltransferase domain J5J84_15210 PF00753 Metallo-beta-lactamase superfamily J5J84_15210 PF16123 Hydroxyacylglutathione hydrolase C-terminus J5J84_15215 PF01464 Transglycosylase SLT domain J5J84_15215 PF01476 LysM domain J5J84_15225 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_15230 PF09084 NMT1/THI5 like J5J84_15235 PF00941 FAD binding domain in molybdopterin dehydrogenase J5J84_15235 PF03450 CO dehydrogenase flavoprotein C-terminal domain J5J84_15240 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_15240 PF01799 [2Fe-2S] binding domain J5J84_15245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J5J84_15245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5J84_15255 PF01047 MarR family J5J84_15260 PF00072 Response regulator receiver domain J5J84_15260 PF00158 Sigma-54 interaction domain J5J84_15260 PF02954 Bacterial regulatory protein, Fis family J5J84_15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_15265 PF02743 Cache domain J5J84_15265 PF00512 His Kinase A (phospho-acceptor) domain J5J84_15270 PF00375 Sodium:dicarboxylate symporter family J5J84_15280 PF00581 Rhodanese-like domain J5J84_15280 PF17773 UPF0176 acylphosphatase like domain J5J84_15305 PF04073 Aminoacyl-tRNA editing domain J5J84_15310 PF05995 Cysteine dioxygenase type I J5J84_15315 PF00378 Enoyl-CoA hydratase/isomerase J5J84_15320 PF13380 CoA binding domain J5J84_15320 PF13607 Succinyl-CoA ligase like flavodoxin domain J5J84_15325 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_15330 PF08240 Alcohol dehydrogenase GroES-like domain J5J84_15330 PF00107 Zinc-binding dehydrogenase J5J84_15335 PF02515 CoA-transferase family III J5J84_15355 PF00107 Zinc-binding dehydrogenase J5J84_15355 PF08240 Alcohol dehydrogenase GroES-like domain J5J84_15360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5J84_15365 PF03466 LysR substrate binding domain J5J84_15365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_15370 PF13419 Haloacid dehalogenase-like hydrolase J5J84_15375 PF00465 Iron-containing alcohol dehydrogenase J5J84_15380 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_15385 PF00005 ABC transporter J5J84_15395 PF03466 LysR substrate binding domain J5J84_15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_15400 PF00501 AMP-binding enzyme J5J84_15400 PF13193 AMP-binding enzyme C-terminal domain J5J84_15415 PF03466 LysR substrate binding domain J5J84_15415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_15420 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_15430 PF02040 Arsenical pump membrane protein J5J84_15435 PF03960 ArsC family J5J84_15440 PF03358 NADPH-dependent FMN reductase J5J84_15445 PF00486 Transcriptional regulatory protein, C terminal J5J84_15445 PF00072 Response regulator receiver domain J5J84_15450 PF00512 His Kinase A (phospho-acceptor) domain J5J84_15450 PF08521 Two-component sensor kinase N-terminal J5J84_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_15465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J5J84_15465 PF01872 RibD C-terminal domain J5J84_15470 PF03477 ATP cone domain J5J84_15475 PF00464 Serine hydroxymethyltransferase J5J84_15480 PF01161 Phosphatidylethanolamine-binding protein J5J84_15485 PF01479 S4 domain J5J84_15485 PF00579 tRNA synthetases class I (W and Y) J5J84_15490 PF04225 Opacity-associated protein A LysM-like domain J5J84_15490 PF01551 Peptidase family M23 J5J84_15495 PF03702 Anhydro-N-acetylmuramic acid kinase J5J84_15500 PF01521 Iron-sulphur cluster biosynthesis J5J84_15510 PF01118 Semialdehyde dehydrogenase, NAD binding domain J5J84_15510 PF02774 Semialdehyde dehydrogenase, dimerisation domain J5J84_15515 PF00380 Ribosomal protein S9/S16 J5J84_15520 PF00572 Ribosomal protein L13 J5J84_15525 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_15530 PF01523 Putative modulator of DNA gyrase J5J84_15535 PF04751 Protein of unknown function (DUF615) J5J84_15555 PF00690 Cation transporter/ATPase, N-terminus J5J84_15555 PF00689 Cation transporting ATPase, C-terminus J5J84_15560 PF00512 His Kinase A (phospho-acceptor) domain J5J84_15560 PF08448 PAS fold J5J84_15560 PF13426 PAS domain J5J84_15560 PF00072 Response regulator receiver domain J5J84_15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_15565 PF00196 Bacterial regulatory proteins, luxR family J5J84_15565 PF00072 Response regulator receiver domain J5J84_15570 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5J84_15575 PF07152 YaeQ protein J5J84_15585 PF01037 Lrp/AsnC ligand binding domain J5J84_15600 PF02325 YGGT family J5J84_15610 PF12833 Helix-turn-helix domain J5J84_15610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5J84_15610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5J84_15610 PF02805 Metal binding domain of Ada J5J84_15615 PF05433 Glycine zipper 2TM domain J5J84_15620 PF00294 pfkB family carbohydrate kinase J5J84_15635 PF02785 Biotin carboxylase C-terminal domain J5J84_15635 PF00289 Biotin carboxylase, N-terminal domain J5J84_15635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5J84_15640 PF00364 Biotin-requiring enzyme J5J84_15645 PF01220 Dehydroquinase class II J5J84_15650 PF00578 AhpC/TSA family J5J84_15655 PF02875 Mur ligase family, glutamate ligase domain J5J84_15655 PF01225 Mur ligase family, catalytic domain J5J84_15655 PF08245 Mur ligase middle domain J5J84_15660 PF05728 Uncharacterised protein family (UPF0227) J5J84_15675 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J5J84_15675 PF01488 Shikimate / quinate 5-dehydrogenase J5J84_15675 PF08501 Shikimate dehydrogenase substrate binding domain J5J84_15680 PF00912 Transglycosylase J5J84_15690 PF00149 Calcineurin-like phosphoesterase J5J84_15695 PF01553 Acyltransferase J5J84_15700 PF03652 Holliday junction resolvase J5J84_15705 PF02622 Uncharacterized ACR, COG1678 J5J84_15710 PF00301 Rubredoxin J5J84_15720 PF02581 Thiamine monophosphate synthase J5J84_15725 PF00202 Aminotransferase class-III J5J84_15730 PF00501 AMP-binding enzyme J5J84_15730 PF13193 AMP-binding enzyme C-terminal domain J5J84_15740 PF01960 ArgJ family J5J84_15750 PF05532 CsbD-like J5J84_15755 PF00829 Ribosomal prokaryotic L21 protein J5J84_15760 PF01016 Ribosomal L27 protein J5J84_15765 PF01018 GTP1/OBG J5J84_15765 PF01926 50S ribosome-binding GTPase J5J84_15770 PF00696 Amino acid kinase family J5J84_15770 PF01472 PUA domain J5J84_15775 PF01266 FAD dependent oxidoreductase J5J84_15795 PF13667 ThiC-associated domain J5J84_15795 PF01964 Radical SAM ThiC family J5J84_15800 PF00691 OmpA family J5J84_15800 PF05736 OprF membrane domain J5J84_15805 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_15810 PF00005 ABC transporter J5J84_15815 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_15820 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_15825 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5J84_15830 PF00005 ABC transporter J5J84_15835 PF18075 FtsX extracellular domain J5J84_15840 PF00633 Helix-hairpin-helix motif J5J84_15840 PF00730 HhH-GPD superfamily base excision DNA repair protein J5J84_15840 PF14815 NUDIX domain J5J84_15845 PF01098 Cell cycle protein J5J84_15850 PF00905 Penicillin binding protein transpeptidase domain J5J84_15850 PF03717 Penicillin-binding Protein dimerisation domain J5J84_15860 PF04085 rod shape-determining protein MreC J5J84_15870 PF02686 Glu-tRNAGln amidotransferase C subunit J5J84_15875 PF01425 Amidase J5J84_15880 PF02934 GatB/GatE catalytic domain J5J84_15880 PF02637 GatB domain J5J84_15885 PF00156 Phosphoribosyl transferase domain J5J84_15890 PF03466 LysR substrate binding domain J5J84_15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_15895 PF07681 DoxX J5J84_15900 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J5J84_15910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_15915 PF00394 Multicopper oxidase J5J84_15915 PF07732 Multicopper oxidase J5J84_15920 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5J84_15925 PF00158 Sigma-54 interaction domain J5J84_15925 PF02954 Bacterial regulatory protein, Fis family J5J84_15940 PF03616 Sodium/glutamate symporter J5J84_15945 PF00348 Polyprenyl synthetase J5J84_15955 PF00293 NUDIX domain J5J84_15960 PF17284 Spermidine synthase tetramerisation domain J5J84_15965 PF02321 Outer membrane efflux protein J5J84_15970 PF00873 AcrB/AcrD/AcrF family J5J84_15975 PF00873 AcrB/AcrD/AcrF family J5J84_15980 PF13533 Biotin-lipoyl like J5J84_15985 PF07072 Cell division protein J5J84_15990 PF01121 Dephospho-CoA kinase J5J84_16000 PF00196 Bacterial regulatory proteins, luxR family J5J84_16000 PF00072 Response regulator receiver domain J5J84_16005 PF02569 Pantoate-beta-alanine ligase J5J84_16010 PF02616 Segregation and condensation protein ScpA J5J84_16020 PF07690 Major Facilitator Superfamily J5J84_16030 PF02607 B12 binding domain J5J84_16030 PF02965 Vitamin B12 dependent methionine synthase, activation domain J5J84_16030 PF02310 B12 binding domain J5J84_16030 PF00809 Pterin binding enzyme J5J84_16030 PF02574 Homocysteine S-methyltransferase J5J84_16035 PF00593 TonB dependent receptor J5J84_16035 PF07715 TonB-dependent Receptor Plug Domain J5J84_16040 PF01497 Periplasmic binding protein J5J84_16045 PF07715 TonB-dependent Receptor Plug Domain J5J84_16045 PF00593 TonB dependent receptor J5J84_16045 PF07660 Secretin and TonB N terminus short domain J5J84_16055 PF08281 Sigma-70, region 4 J5J84_16055 PF04542 Sigma-70 region 2 J5J84_16065 PF13609 Gram-negative porin J5J84_16075 PF01544 CorA-like Mg2+ transporter protein J5J84_16085 PF01544 CorA-like Mg2+ transporter protein J5J84_16100 PF05690 Thiazole biosynthesis protein ThiG J5J84_16105 PF08543 Phosphomethylpyrimidine kinase J5J84_16110 PF01048 Phosphorylase superfamily J5J84_16120 PF02321 Outer membrane efflux protein J5J84_16125 PF01467 Cytidylyltransferase-like J5J84_16135 PF03109 ABC1 family J5J84_16150 PF01209 ubiE/COQ5 methyltransferase family J5J84_16155 PF00486 Transcriptional regulatory protein, C terminal J5J84_16155 PF00072 Response regulator receiver domain J5J84_16160 PF11808 Phosphate regulon sensor protein PhoR J5J84_16160 PF00512 His Kinase A (phospho-acceptor) domain J5J84_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_16160 PF00989 PAS fold J5J84_16170 PF02682 Carboxyltransferase domain, subdomain C and D J5J84_16175 PF02626 Carboxyltransferase domain, subdomain A and B J5J84_16180 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_16180 PF00585 C-terminal regulatory domain of Threonine dehydratase J5J84_16185 PF09335 SNARE associated Golgi protein J5J84_16200 PF03797 Autotransporter beta-domain J5J84_16200 PF00082 Subtilase family J5J84_16205 PF00156 Phosphoribosyl transferase domain J5J84_16210 PF00664 ABC transporter transmembrane region J5J84_16210 PF00005 ABC transporter J5J84_16215 PF00005 ABC transporter J5J84_16215 PF00664 ABC transporter transmembrane region J5J84_16220 PF08173 Membrane bound YbgT-like protein J5J84_16225 PF02322 Cytochrome bd terminal oxidase subunit II J5J84_16230 PF01654 Cytochrome bd terminal oxidase subunit I J5J84_16240 PF00571 CBS domain J5J84_16240 PF01380 SIS domain J5J84_16260 PF00005 ABC transporter J5J84_16265 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J5J84_16270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J5J84_16275 PF07475 HPr Serine kinase C-terminal domain J5J84_16275 PF02603 HPr Serine kinase N terminus J5J84_16280 PF03668 P-loop ATPase protein family J5J84_16285 PF03330 Lytic transglycolase J5J84_16285 PF05036 Sporulation related domain J5J84_16290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5J84_16295 PF02021 Uncharacterised protein family UPF0102 J5J84_16300 PF13580 SIS domain J5J84_16310 PF00578 AhpC/TSA family J5J84_16315 PF00696 Amino acid kinase family J5J84_16325 PF00171 Aldehyde dehydrogenase family J5J84_16330 PF12833 Helix-turn-helix domain J5J84_16335 PF00899 ThiF family J5J84_16340 PF13180 PDZ domain J5J84_16340 PF03572 Peptidase family S41 J5J84_16345 PF01551 Peptidase family M23 J5J84_16350 PF00300 Histidine phosphatase superfamily (branch 1) J5J84_16355 PF00581 Rhodanese-like domain J5J84_16360 PF00462 Glutaredoxin J5J84_16365 PF02556 Preprotein translocase subunit SecB J5J84_16370 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J5J84_16370 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J5J84_16375 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_16380 PF00588 SpoU rRNA Methylase family J5J84_16385 PF00156 Phosphoribosyl transferase domain J5J84_16390 PF08241 Methyltransferase domain J5J84_16395 PF07715 TonB-dependent Receptor Plug Domain J5J84_16395 PF00593 TonB dependent receptor J5J84_16400 PF00072 Response regulator receiver domain J5J84_16400 PF00486 Transcriptional regulatory protein, C terminal J5J84_16405 PF00512 His Kinase A (phospho-acceptor) domain J5J84_16405 PF00672 HAMP domain J5J84_16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_16410 PF00885 6,7-dimethyl-8-ribityllumazine synthase J5J84_16415 PF00158 Sigma-54 interaction domain J5J84_16415 PF00072 Response regulator receiver domain J5J84_16415 PF02954 Bacterial regulatory protein, Fis family J5J84_16420 PF00672 HAMP domain J5J84_16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_16430 PF01029 NusB family J5J84_16430 PF01189 16S rRNA methyltransferase RsmB/F J5J84_16435 PF04055 Radical SAM superfamily J5J84_16435 PF00919 Uncharacterized protein family UPF0004 J5J84_16435 PF18693 TRAM domain J5J84_16440 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_16445 PF16363 GDP-mannose 4,6 dehydratase J5J84_16450 PF17645 Arylmalonate decarboxylase J5J84_16455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_16455 PF03466 LysR substrate binding domain J5J84_16460 PF03328 HpcH/HpaI aldolase/citrate lyase family J5J84_16465 PF00005 ABC transporter J5J84_16470 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_16495 PF00535 Glycosyl transferase family 2 J5J84_16520 PF01527 Transposase J5J84_16535 PF13439 Glycosyltransferase Family 4 J5J84_16535 PF00534 Glycosyl transferases group 1 J5J84_16540 PF08003 Protein of unknown function (DUF1698) J5J84_16550 PF00005 ABC transporter J5J84_16555 PF01061 ABC-2 type transporter J5J84_16560 PF00535 Glycosyl transferase family 2 J5J84_16565 PF00872 Transposase, Mutator family J5J84_16570 PF00535 Glycosyl transferase family 2 J5J84_16580 PF02397 Bacterial sugar transferase J5J84_16585 PF04932 O-Antigen ligase J5J84_16590 PF01943 Polysaccharide biosynthesis protein J5J84_16590 PF14667 Polysaccharide biosynthesis C-terminal domain J5J84_16595 PF16363 GDP-mannose 4,6 dehydratase J5J84_16600 PF00483 Nucleotidyl transferase J5J84_16610 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J5J84_16615 PF04321 RmlD substrate binding domain J5J84_16620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J5J84_16625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5J84_16625 PF02874 ATP synthase alpha/beta family, beta-barrel domain J5J84_16630 PF00231 ATP synthase J5J84_16635 PF00306 ATP synthase alpha/beta chain, C terminal domain J5J84_16635 PF02874 ATP synthase alpha/beta family, beta-barrel domain J5J84_16635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5J84_16640 PF00213 ATP synthase delta (OSCP) subunit J5J84_16645 PF00430 ATP synthase B/B' CF(0) J5J84_16650 PF00137 ATP synthase subunit C J5J84_16655 PF00119 ATP synthase A chain J5J84_16665 PF00378 Enoyl-CoA hydratase/isomerase J5J84_16680 PF01171 PP-loop family J5J84_16685 PF02441 Flavoprotein J5J84_16690 PF00462 Glutaredoxin J5J84_16695 PF05175 Methyltransferase small domain J5J84_16695 PF17827 PrmC N-terminal domain J5J84_16700 PF03462 PCRF domain J5J84_16700 PF00472 RF-1 domain J5J84_16705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J5J84_16705 PF01488 Shikimate / quinate 5-dehydrogenase J5J84_16705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J5J84_16720 PF13657 HipA N-terminal domain J5J84_16720 PF07804 HipA-like C-terminal domain J5J84_16735 PF00398 Ribosomal RNA adenine dimethylase J5J84_16745 PF07715 TonB-dependent Receptor Plug Domain J5J84_16745 PF00593 TonB dependent receptor J5J84_16765 PF00474 Sodium:solute symporter family J5J84_16770 PF00795 Carbon-nitrogen hydrolase J5J84_16780 PF00080 Copper/zinc superoxide dismutase (SODC) J5J84_16790 PF05145 Transition state regulatory protein AbrB J5J84_16795 PF01970 Tripartite tricarboxylate transporter TctA family J5J84_16810 PF00672 HAMP domain J5J84_16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_16810 PF00512 His Kinase A (phospho-acceptor) domain J5J84_16815 PF00072 Response regulator receiver domain J5J84_16815 PF00486 Transcriptional regulatory protein, C terminal J5J84_16820 PF03466 LysR substrate binding domain J5J84_16820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_16825 PF00083 Sugar (and other) transporter J5J84_16825 PF08946 Osmosensory transporter coiled coil J5J84_16830 PF00795 Carbon-nitrogen hydrolase J5J84_16855 PF00005 ABC transporter J5J84_16885 PF13247 4Fe-4S dicluster domain J5J84_16885 PF12800 4Fe-4S binding domain J5J84_16885 PF09163 Formate dehydrogenase N, transmembrane J5J84_16890 PF01292 Prokaryotic cytochrome b561 J5J84_16895 PF04216 Protein involved in formate dehydrogenase formation J5J84_16900 PF03841 L-seryl-tRNA selenium transferase J5J84_16900 PF12390 Selenocysteine synthase N terminal J5J84_16905 PF00009 Elongation factor Tu GTP binding domain J5J84_16905 PF03144 Elongation factor Tu domain 2 J5J84_16905 PF09107 Elongation factor SelB, winged helix J5J84_16905 PF09106 Elongation factor SelB, winged helix J5J84_16915 PF01381 Helix-turn-helix J5J84_16920 PF00596 Class II Aldolase and Adducin N-terminal domain J5J84_16930 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_16935 PF07715 TonB-dependent Receptor Plug Domain J5J84_16935 PF00593 TonB dependent receptor J5J84_16945 PF00593 TonB dependent receptor J5J84_16945 PF07715 TonB-dependent Receptor Plug Domain J5J84_16945 PF07660 Secretin and TonB N terminus short domain J5J84_16950 PF00586 AIR synthase related protein, N-terminal domain J5J84_16950 PF02769 AIR synthase related protein, C-terminal domain J5J84_16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_16965 PF03466 LysR substrate binding domain J5J84_16975 PF12801 4Fe-4S binding domain J5J84_16975 PF04205 FMN-binding domain J5J84_16980 PF13473 Cupredoxin-like domain J5J84_16980 PF18764 Nitrous oxide reductase propeller repeat J5J84_16980 PF18793 Nitrous oxide reductase propeller repeat 2 J5J84_16985 PF05048 Periplasmic copper-binding protein (NosD) J5J84_16990 PF00005 ABC transporter J5J84_16995 PF12679 ABC-2 family transporter protein J5J84_17010 PF00342 Phosphoglucose isomerase J5J84_17035 PF02350 UDP-N-acetylglucosamine 2-epimerase J5J84_17055 PF00860 Permease family J5J84_17060 PF00892 EamA-like transporter family J5J84_17065 PF00392 Bacterial regulatory proteins, gntR family J5J84_17065 PF00155 Aminotransferase class I and II J5J84_17070 PF00892 EamA-like transporter family J5J84_17085 PF06761 Intracellular multiplication and human macrophage-killing J5J84_17085 PF14331 ImcF-related N-terminal domain J5J84_17085 PF06744 Type VI secretion protein IcmF C-terminal J5J84_17090 PF00691 OmpA family J5J84_17090 PF13488 Glycine zipper J5J84_17095 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J5J84_17120 PF05947 Type VI secretion system, TssF J5J84_17125 PF04965 Gene 25-like lysozyme J5J84_17135 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J5J84_17140 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 J5J84_17175 PF06715 Gp5 C-terminal repeat (3 copies) J5J84_17175 PF04717 Type VI secretion system, phage-baseplate injector J5J84_17185 PF02803 Thiolase, C-terminal domain J5J84_17185 PF00108 Thiolase, N-terminal domain J5J84_17190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5J84_17190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5J84_17190 PF00378 Enoyl-CoA hydratase/isomerase J5J84_17205 PF00005 ABC transporter J5J84_17210 PF02405 Permease MlaE J5J84_17215 PF02470 MlaD protein J5J84_17230 PF00005 ABC transporter J5J84_17235 PF01061 ABC-2 type transporter J5J84_17245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J5J84_17250 PF01634 ATP phosphoribosyltransferase J5J84_17255 PF00815 Histidinol dehydrogenase J5J84_17260 PF00475 Imidazoleglycerol-phosphate dehydratase J5J84_17265 PF00117 Glutamine amidotransferase class-I J5J84_17270 PF00977 Histidine biosynthesis protein J5J84_17275 PF00977 Histidine biosynthesis protein J5J84_17280 PF01502 Phosphoribosyl-AMP cyclohydrolase J5J84_17285 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J5J84_17290 PF01230 HIT domain J5J84_17295 PF02416 mttA/Hcf106 family J5J84_17300 PF02416 mttA/Hcf106 family J5J84_17305 PF00902 Sec-independent protein translocase protein (TatC) J5J84_17310 PF13180 PDZ domain J5J84_17315 PF01784 NIF3 (NGG1p interacting factor 3) J5J84_17320 PF01741 Large-conductance mechanosensitive channel, MscL J5J84_17325 PF00355 Rieske [2Fe-2S] domain J5J84_17325 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J5J84_17330 PF00033 Cytochrome b/b6/petB J5J84_17330 PF00032 Cytochrome b(C-terminal)/b6/petD J5J84_17335 PF02167 Cytochrome C1 family J5J84_17340 PF00043 Glutathione S-transferase, C-terminal domain J5J84_17340 PF02798 Glutathione S-transferase, N-terminal domain J5J84_17345 PF04386 Stringent starvation protein B J5J84_17350 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_17355 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_17375 PF01070 FMN-dependent dehydrogenase J5J84_17380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5J84_17380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5J84_17390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5J84_17400 PF03480 Bacterial extracellular solute-binding protein, family 7 J5J84_17405 PF01370 NAD dependent epimerase/dehydratase family J5J84_17415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5J84_17415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5J84_17420 PF00920 Dehydratase family J5J84_17425 PF07729 FCD domain J5J84_17425 PF00392 Bacterial regulatory proteins, gntR family J5J84_17430 PF01037 Lrp/AsnC ligand binding domain J5J84_17430 PF13404 AsnC-type helix-turn-helix domain J5J84_17440 PF03301 Tryptophan 2,3-dioxygenase J5J84_17455 PF03466 LysR substrate binding domain J5J84_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_17460 PF02548 Ketopantoate hydroxymethyltransferase J5J84_17465 PF00248 Aldo/keto reductase family J5J84_17470 PF07690 Major Facilitator Superfamily J5J84_17475 PF00330 Aconitase family (aconitate hydratase) J5J84_17475 PF00694 Aconitase C-terminal domain J5J84_17480 PF07694 5TMR of 5TMR-LYT J5J84_17480 PF00990 Diguanylate cyclase, GGDEF domain J5J84_17485 PF13847 Methyltransferase domain J5J84_17495 PF00795 Carbon-nitrogen hydrolase J5J84_17510 PF07969 Amidohydrolase family J5J84_17515 PF03466 LysR substrate binding domain J5J84_17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_17520 PF08946 Osmosensory transporter coiled coil J5J84_17520 PF00083 Sugar (and other) transporter J5J84_17530 PF05726 Pirin C-terminal cupin domain J5J84_17530 PF02678 Pirin J5J84_17535 PF00857 Isochorismatase family J5J84_17540 PF05726 Pirin C-terminal cupin domain J5J84_17540 PF02678 Pirin J5J84_17545 PF03466 LysR substrate binding domain J5J84_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_17550 PF05532 CsbD-like J5J84_17555 PF04972 BON domain J5J84_17560 PF00743 Flavin-binding monooxygenase-like J5J84_17565 PF00158 Sigma-54 interaction domain J5J84_17565 PF02954 Bacterial regulatory protein, Fis family J5J84_17565 PF01590 GAF domain J5J84_17585 PF00593 TonB dependent receptor J5J84_17585 PF07715 TonB-dependent Receptor Plug Domain J5J84_17595 PF04542 Sigma-70 region 2 J5J84_17595 PF08281 Sigma-70, region 4 J5J84_17600 PF01380 SIS domain J5J84_17605 PF01037 Lrp/AsnC ligand binding domain J5J84_17615 PF12804 MobA-like NTP transferase domain J5J84_17615 PF14602 Hexapeptide repeat of succinyl-transferase J5J84_17615 PF00132 Bacterial transferase hexapeptide (six repeats) J5J84_17630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J5J84_17630 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J5J84_17635 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5J84_17645 PF00510 Cytochrome c oxidase subunit III J5J84_17665 PF02628 Cytochrome oxidase assembly protein J5J84_17670 PF01040 UbiA prenyltransferase family J5J84_17675 PF00999 Sodium/hydrogen exchanger family J5J84_17685 PF07715 TonB-dependent Receptor Plug Domain J5J84_17685 PF00593 TonB dependent receptor J5J84_17690 PF04545 Sigma-70, region 4 J5J84_17690 PF00140 Sigma-70 factor, region 1.2 J5J84_17690 PF04542 Sigma-70 region 2 J5J84_17695 PF00756 Putative esterase J5J84_17700 PF00107 Zinc-binding dehydrogenase J5J84_17700 PF08240 Alcohol dehydrogenase GroES-like domain J5J84_17705 PF13091 PLD-like domain J5J84_17710 PF03372 Endonuclease/Exonuclease/phosphatase family J5J84_17715 PF00152 tRNA synthetases class II (D, K and N) J5J84_17715 PF01336 OB-fold nucleic acid binding domain J5J84_17715 PF02938 GAD domain J5J84_17735 PF01040 UbiA prenyltransferase family J5J84_17740 PF00155 Aminotransferase class I and II J5J84_17750 PF01979 Amidohydrolase family J5J84_17770 PF00221 Aromatic amino acid lyase J5J84_17775 PF01175 Urocanase Rossmann-like domain J5J84_17775 PF17392 Urocanase C-terminal domain J5J84_17775 PF17391 Urocanase N-terminal domain J5J84_17780 PF00392 Bacterial regulatory proteins, gntR family J5J84_17780 PF07702 UTRA domain J5J84_17795 PF00797 N-acetyltransferase J5J84_17800 PF00085 Thioredoxin J5J84_17805 PF07690 Major Facilitator Superfamily J5J84_17815 PF13411 MerR HTH family regulatory protein J5J84_17820 PF07690 Major Facilitator Superfamily J5J84_17845 PF02798 Glutathione S-transferase, N-terminal domain J5J84_17845 PF00043 Glutathione S-transferase, C-terminal domain J5J84_17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_17850 PF03466 LysR substrate binding domain J5J84_17855 PF00970 Oxidoreductase FAD-binding domain J5J84_17855 PF00042 Globin J5J84_17855 PF00175 Oxidoreductase NAD-binding domain J5J84_17860 PF00355 Rieske [2Fe-2S] domain J5J84_17865 PF03466 LysR substrate binding domain J5J84_17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5J84_17870 PF00155 Aminotransferase class I and II J5J84_17875 PF13350 Tyrosine phosphatase family J5J84_17880 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J5J84_17880 PF00753 Metallo-beta-lactamase superfamily J5J84_17880 PF10996 Beta-Casp domain J5J84_17900 PF02423 Ornithine cyclodeaminase/mu-crystallin family J5J84_17905 PF00175 Oxidoreductase NAD-binding domain J5J84_17905 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_17905 PF00970 Oxidoreductase FAD-binding domain J5J84_17925 PF00111 2Fe-2S iron-sulfur cluster binding domain J5J84_17925 PF00970 Oxidoreductase FAD-binding domain J5J84_17925 PF00175 Oxidoreductase NAD-binding domain J5J84_17930 PF03928 Haem-degrading J5J84_17935 PF00171 Aldehyde dehydrogenase family J5J84_17960 PF00392 Bacterial regulatory proteins, gntR family J5J84_17960 PF07729 FCD domain J5J84_17965 PF00440 Bacterial regulatory proteins, tetR family J5J84_17970 PF07690 Major Facilitator Superfamily J5J84_17975 PF00210 Ferritin-like domain J5J84_17985 PF07690 Major Facilitator Superfamily J5J84_17990 PF01042 Endoribonuclease L-PSP J5J84_17995 PF03401 Tripartite tricarboxylate transporter family receptor J5J84_18000 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5J84_18005 PF07729 FCD domain J5J84_18005 PF00392 Bacterial regulatory proteins, gntR family J5J84_18010 PF00436 Single-strand binding protein family J5J84_18015 PF07690 Major Facilitator Superfamily J5J84_18020 PF17755 UvrA DNA-binding domain J5J84_18020 PF17760 UvrA interaction domain J5J84_18025 PF13286 Phosphohydrolase-associated domain J5J84_18025 PF01966 HD domain J5J84_18030 PF01761 3-dehydroquinate synthase J5J84_18035 PF01202 Shikimate kinase J5J84_18040 PF00905 Penicillin binding protein transpeptidase domain J5J84_18040 PF00912 Transglycosylase J5J84_18040 PF17092 Penicillin-binding protein OB-like domain J5J84_18050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J5J84_18050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J5J84_18055 PF08448 PAS fold J5J84_18055 PF00990 Diguanylate cyclase, GGDEF domain J5J84_18055 PF00563 EAL domain J5J84_18060 PF01548 Transposase J5J84_18060 PF02371 Transposase IS116/IS110/IS902 family J5J84_18065 PF01578 Cytochrome C assembly protein J5J84_18070 PF05140 ResB-like family J5J84_18075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5J84_18080 PF01926 50S ribosome-binding GTPase J5J84_18085 PF00490 Delta-aminolevulinic acid dehydratase J5J84_18090 PF11412 Disulphide bond corrector protein DsbC J5J84_18090 PF02683 Cytochrome C biogenesis protein transmembrane region J5J84_18095 PF03091 CutA1 divalent ion tolerance protein J5J84_18100 PF14525 AraC-binding-like domain J5J84_18100 PF12833 Helix-turn-helix domain J5J84_18110 PF00296 Luciferase-like monooxygenase J5J84_18115 PF01196 Ribosomal protein L17 J5J84_18120 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J5J84_18120 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J5J84_18120 PF01000 RNA polymerase Rpb3/RpoA insert domain J5J84_18125 PF00163 Ribosomal protein S4/S9 N-terminal domain J5J84_18125 PF01479 S4 domain J5J84_18130 PF00411 Ribosomal protein S11 J5J84_18135 PF00416 Ribosomal protein S13/S18 J5J84_18140 PF00444 Ribosomal protein L36 J5J84_18145 PF01176 Translation initiation factor 1A / IF-1 J5J84_18150 PF00344 SecY translocase J5J84_18155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J5J84_18160 PF00327 Ribosomal protein L30p/L7e J5J84_18165 PF03719 Ribosomal protein S5, C-terminal domain J5J84_18165 PF00333 Ribosomal protein S5, N-terminal domain J5J84_18170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J5J84_18175 PF00347 Ribosomal protein L6 J5J84_18180 PF00410 Ribosomal protein S8 J5J84_18185 PF00253 Ribosomal protein S14p/S29e J5J84_18190 PF00281 Ribosomal protein L5 J5J84_18190 PF00673 ribosomal L5P family C-terminus J5J84_18195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J5J84_18200 PF00238 Ribosomal protein L14p/L23e J5J84_18225 PF00529 HlyD membrane-fusion protein of T1SS J5J84_18230 PF00005 ABC transporter J5J84_18230 PF00664 ABC transporter transmembrane region J5J84_18230 PF03412 Peptidase C39 family J5J84_18240 PF02321 Outer membrane efflux protein J5J84_18245 PF00171 Aldehyde dehydrogenase family J5J84_18255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5J84_18255 PF02770 Acyl-CoA dehydrogenase, middle domain J5J84_18255 PF09317 Domain of unknown function (DUF1974) J5J84_18255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5J84_18260 PF02803 Thiolase, C-terminal domain J5J84_18260 PF00108 Thiolase, N-terminal domain J5J84_18265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5J84_18265 PF00378 Enoyl-CoA hydratase/isomerase J5J84_18265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5J84_18270 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J5J84_18285 PF00501 AMP-binding enzyme J5J84_18285 PF13193 AMP-binding enzyme C-terminal domain J5J84_18290 PF00258 Flavodoxin J5J84_18290 PF00175 Oxidoreductase NAD-binding domain J5J84_18290 PF00667 FAD binding domain J5J84_18295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J5J84_18295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J5J84_18300 PF14824 Sirohaem biosynthesis protein central J5J84_18300 PF10414 Sirohaem synthase dimerisation region J5J84_18300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5J84_18305 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_18315 PF00005 ABC transporter J5J84_18330 PF12852 Cupin J5J84_18330 PF12833 Helix-turn-helix domain J5J84_18335 PF00366 Ribosomal protein S17 J5J84_18340 PF00831 Ribosomal L29 protein J5J84_18345 PF00252 Ribosomal protein L16p/L10e J5J84_18350 PF00189 Ribosomal protein S3, C-terminal domain J5J84_18350 PF07650 KH domain J5J84_18355 PF00237 Ribosomal protein L22p/L17e J5J84_18360 PF00203 Ribosomal protein S19 J5J84_18365 PF00181 Ribosomal Proteins L2, RNA binding domain J5J84_18365 PF03947 Ribosomal Proteins L2, C-terminal domain J5J84_18370 PF00276 Ribosomal protein L23 J5J84_18375 PF00573 Ribosomal protein L4/L1 family J5J84_18380 PF00297 Ribosomal protein L3 J5J84_18385 PF00005 ABC transporter J5J84_18385 PF00571 CBS domain J5J84_18390 PF00528 Binding-protein-dependent transport system inner membrane component J5J84_18395 PF00338 Ribosomal protein S10p/S20e J5J84_18400 PF00009 Elongation factor Tu GTP binding domain J5J84_18400 PF03144 Elongation factor Tu domain 2 J5J84_18400 PF03143 Elongation factor Tu C-terminal domain J5J84_18405 PF14492 Elongation Factor G, domain II J5J84_18405 PF00679 Elongation factor G C-terminus J5J84_18405 PF00009 Elongation factor Tu GTP binding domain J5J84_18405 PF03764 Elongation factor G, domain IV J5J84_18405 PF03144 Elongation factor Tu domain 2 J5J84_18410 PF00177 Ribosomal protein S7p/S5e J5J84_18415 PF00164 Ribosomal protein S12/S23 J5J84_18420 PF00072 Response regulator receiver domain J5J84_18420 PF00486 Transcriptional regulatory protein, C terminal J5J84_18430 PF00672 HAMP domain J5J84_18430 PF00512 His Kinase A (phospho-acceptor) domain J5J84_18430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5J84_18445 PF00127 Copper binding proteins, plastocyanin/azurin family J5J84_18450 PF04998 RNA polymerase Rpb1, domain 5 J5J84_18450 PF04997 RNA polymerase Rpb1, domain 1 J5J84_18450 PF00623 RNA polymerase Rpb1, domain 2 J5J84_18450 PF04983 RNA polymerase Rpb1, domain 3 J5J84_18450 PF05000 RNA polymerase Rpb1, domain 4 J5J84_18455 PF04560 RNA polymerase Rpb2, domain 7 J5J84_18455 PF00562 RNA polymerase Rpb2, domain 6 J5J84_18455 PF10385 RNA polymerase beta subunit external 1 domain J5J84_18455 PF04561 RNA polymerase Rpb2, domain 2 J5J84_18455 PF04565 RNA polymerase Rpb2, domain 3 J5J84_18455 PF04563 RNA polymerase beta subunit J5J84_18460 PF16320 Ribosomal protein L7/L12 dimerisation domain J5J84_18460 PF00542 Ribosomal protein L7/L12 C-terminal domain J5J84_18465 PF00466 Ribosomal protein L10 J5J84_18470 PF00687 Ribosomal protein L1p/L10e family J5J84_18475 PF00298 Ribosomal protein L11, RNA binding domain J5J84_18475 PF03946 Ribosomal protein L11, N-terminal domain J5J84_18480 PF02357 Transcription termination factor nusG J5J84_18480 PF00467 KOW motif J5J84_18495 PF00009 Elongation factor Tu GTP binding domain J5J84_18495 PF03143 Elongation factor Tu C-terminal domain J5J84_18495 PF03144 Elongation factor Tu domain 2 J5J84_18515 PF02195 ParB-like nuclease domain J5J84_18515 PF17762 HTH domain found in ParB protein J5J84_18520 PF13614 AAA domain J5J84_18525 PF02527 rRNA small subunit methyltransferase G J5J84_18530 PF01134 Glucose inhibited division protein A J5J84_18530 PF13932 GidA associated domain J5J84_18535 PF00155 Aminotransferase class I and II J5J84_18545 PF00149 Calcineurin-like phosphoesterase J5J84_18555 PF00990 Diguanylate cyclase, GGDEF domain J5J84_18560 PF02666 Phosphatidylserine decarboxylase J5J84_18570 PF13291 ACT domain J5J84_18570 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_18580 PF02567 Phenazine biosynthesis-like protein J5J84_18615 PF10396 GTP-binding protein TrmE N-terminus J5J84_18615 PF01926 50S ribosome-binding GTPase J5J84_18615 PF12631 MnmE helical domain J5J84_18620 PF07883 Cupin domain J5J84_18620 PF01381 Helix-turn-helix J5J84_18625 PF07687 Peptidase dimerisation domain J5J84_18625 PF01546 Peptidase family M20/M25/M40 J5J84_18630 PF00291 Pyridoxal-phosphate dependent enzyme J5J84_18635 PF02423 Ornithine cyclodeaminase/mu-crystallin family J5J84_18650 PF00199 Catalase J5J84_18650 PF06628 Catalase-related immune-responsive J5J84_18655 PF14849 YidC periplasmic domain J5J84_18655 PF02096 60Kd inner membrane protein J5J84_18660 PF01809 Putative membrane protein insertion efficiency factor J5J84_18665 PF00825 Ribonuclease P J5J84_18670 PF00468 Ribosomal protein L34