locus-tag class description AFA_00005 IPR003593 AAA+ ATPase domain AFA_00005 IPR010921 Trp repressor/replication initiator AFA_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00005 IPR038454 DnaA, N-terminal domain superfamily AFA_00005 IPR024633 DnaA N-terminal domain AFA_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal AFA_00005 IPR013317 Chromosomal replication initiator protein DnaA AFA_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AFA_00005 IPR020591 Chromosomal replication control, initiator DnaA-like AFA_00005 IPR001957 Chromosomal replication control, initiator DnaA AFA_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal AFA_00010 IPR022637 DNA polymerase III, beta sliding clamp, central AFA_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal AFA_00010 IPR001001 DNA polymerase III, beta sliding clamp AFA_00015 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AFA_00015 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AFA_00015 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AFA_00015 IPR006171 TOPRIM domain AFA_00015 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_00015 IPR034160 DNA gyrase subunit B, TOPRIM domain AFA_00015 IPR001241 DNA topoisomerase, type IIA AFA_00015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_00015 IPR018522 DNA topoisomerase, type IIA, conserved site AFA_00015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_00015 IPR003594 Histidine kinase/HSP90-like ATPase AFA_00015 IPR041423 DNA gyrase subunit B insert domain AFA_00015 IPR011557 DNA gyrase, subunit B AFA_00015 IPR002288 DNA gyrase B subunit, C-terminal AFA_00020 IPR006145 Pseudouridine synthase, RsuA/RluA AFA_00020 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AFA_00020 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AFA_00020 IPR002942 RNA-binding S4 domain AFA_00020 IPR036986 RNA-binding S4 domain superfamily AFA_00020 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_00020 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AFA_00030 IPR042100 Bordetella uptake gene, domain 1 AFA_00030 IPR005064 Bordetella uptake gene AFA_00035 IPR015590 Aldehyde dehydrogenase domain AFA_00035 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_00035 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_00035 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_00035 IPR016161 Aldehyde/histidinol dehydrogenase AFA_00040 IPR027424 Glucose Oxidase, domain 2 AFA_00040 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AFA_00040 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AFA_00040 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_00040 IPR012132 Glucose-methanol-choline oxidoreductase AFA_00045 IPR042100 Bordetella uptake gene, domain 1 AFA_00045 IPR005064 Bordetella uptake gene AFA_00050 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AFA_00050 IPR001279 Metallo-beta-lactamase AFA_00050 IPR017782 Hydroxyacylglutathione hydrolase AFA_00050 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AFA_00050 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AFA_00060 IPR011711 GntR, C-terminal AFA_00060 IPR008920 Transcription regulator FadR/GntR, C-terminal AFA_00060 IPR036390 Winged helix DNA-binding domain superfamily AFA_00060 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00060 IPR000524 Transcription regulator HTH, GntR AFA_00065 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_00065 IPR004681 TRAP transporter large membrane protein DctM AFA_00075 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_00075 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_00075 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_00075 IPR012675 Beta-grasp domain superfamily AFA_00075 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_00075 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_00075 IPR000951 Phthalate dioxygenase reductase AFA_00075 IPR017938 Riboflavin synthase-like beta-barrel AFA_00075 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_00075 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_00085 IPR036291 NAD(P)-binding domain superfamily AFA_00085 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_00085 IPR013023 Ketol-acid reductoisomerase AFA_00085 IPR000506 Ketol-acid reductoisomerase, C-terminal AFA_00085 IPR013116 Ketol-acid reductoisomerase, N-terminal AFA_00085 IPR014359 Ketol-acid reductoisomerase, prokaryotic AFA_00090 IPR005119 LysR, substrate-binding AFA_00090 IPR036390 Winged helix DNA-binding domain superfamily AFA_00090 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00090 IPR000847 Transcription regulator HTH, LysR AFA_00100 IPR026289 Solute binding protein, TakP-like AFA_00100 IPR041722 Alpha-keto acid binding periplasmic protein AFA_00100 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_00100 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_00100 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_00110 IPR001851 ABC transporter, permease AFA_00115 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AFA_00115 IPR001851 ABC transporter, permease AFA_00120 IPR003593 AAA+ ATPase domain AFA_00120 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_00120 IPR003439 ABC transporter-like AFA_00120 IPR017871 ABC transporter, conserved site AFA_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00125 IPR000873 AMP-dependent synthetase/ligase AFA_00125 IPR020845 AMP-binding, conserved site AFA_00125 IPR025110 AMP-binding enzyme, C-terminal domain AFA_00135 IPR000089 Biotin/lipoyl attachment AFA_00135 IPR000073 Alpha/beta hydrolase fold-1 AFA_00135 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AFA_00135 IPR011053 Single hybrid motif AFA_00135 IPR029058 Alpha/Beta hydrolase fold AFA_00140 IPR000524 Transcription regulator HTH, GntR AFA_00140 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_00140 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_00140 IPR015424 Pyridoxal phosphate-dependent transferase AFA_00140 IPR004839 Aminotransferase, class I/classII AFA_00140 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00140 IPR036390 Winged helix DNA-binding domain superfamily AFA_00145 IPR001753 Enoyl-CoA hydratase/isomerase AFA_00145 IPR029045 ClpP/crotonase-like domain superfamily AFA_00145 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_00150 IPR026286 Maleate isomerase/Arylmalonate decarboxylase AFA_00150 IPR011060 Ribulose-phosphate binding barrel AFA_00155 IPR005064 Bordetella uptake gene AFA_00155 IPR042100 Bordetella uptake gene, domain 1 AFA_00165 IPR000620 EamA domain AFA_00170 IPR036390 Winged helix DNA-binding domain superfamily AFA_00170 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00170 IPR000847 Transcription regulator HTH, LysR AFA_00170 IPR020890 Transcription regulator HTH, HdfR AFA_00170 IPR005119 LysR, substrate-binding AFA_00180 IPR008995 Molybdate/tungstate binding, C-terminal AFA_00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00180 IPR017871 ABC transporter, conserved site AFA_00180 IPR003439 ABC transporter-like AFA_00180 IPR003593 AAA+ ATPase domain AFA_00180 IPR015853 ABC transporter, ferric cation import, FbpC AFA_00180 IPR013611 Transport-associated OB, type 2 AFA_00195 IPR012649 Phosphonopyruvate hydrolase AFA_00195 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_00195 IPR040442 Pyruvate kinase-like domain superfamily AFA_00195 IPR039556 ICL/PEPM domain AFA_00200 IPR036627 CobW-like, C-terminal domain superfamily AFA_00200 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AFA_00200 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00200 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AFA_00205 IPR036291 NAD(P)-binding domain superfamily AFA_00205 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AFA_00205 IPR027399 Alcohol dehydrogenase GroES-associated AFA_00205 IPR013149 Alcohol dehydrogenase, C-terminal AFA_00205 IPR011032 GroES-like superfamily AFA_00205 IPR013154 Alcohol dehydrogenase, N-terminal AFA_00210 IPR042100 Bordetella uptake gene, domain 1 AFA_00210 IPR005064 Bordetella uptake gene AFA_00235 IPR000917 Sulfatase, N-terminal AFA_00235 IPR032506 Domain of unknown function DUF4976 AFA_00235 IPR017850 Alkaline-phosphatase-like, core domain superfamily AFA_00245 IPR012712 HTH-type transcriptional regulator HpaR/FarR AFA_00245 IPR000835 MarR-type HTH domain AFA_00245 IPR036390 Winged helix DNA-binding domain superfamily AFA_00245 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00245 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_00260 IPR000835 MarR-type HTH domain AFA_00260 IPR036390 Winged helix DNA-binding domain superfamily AFA_00260 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00260 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_00265 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site AFA_00265 IPR029069 HotDog domain superfamily AFA_00270 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_00270 IPR002938 FAD-binding domain AFA_00275 IPR011051 RmlC-like cupin domain superfamily AFA_00275 IPR013096 Cupin 2, conserved barrel AFA_00275 IPR014710 RmlC-like jelly roll fold AFA_00280 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AFA_00280 IPR011234 Fumarylacetoacetase-like, C-terminal AFA_00285 IPR003010 Carbon-nitrogen hydrolase AFA_00285 IPR036526 Carbon-nitrogen hydrolase superfamily AFA_00285 IPR000132 Nitrilase/cyanide hydratase, conserved site AFA_00290 IPR007325 Kynurenine formamidase/cyclase-like AFA_00290 IPR037175 Kynurenine formamidase superfamily AFA_00295 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_00295 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_00295 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_00295 IPR017938 Riboflavin synthase-like beta-barrel AFA_00295 IPR039003 Carnitine monooxygenase reductase subunit AFA_00295 IPR012675 Beta-grasp domain superfamily AFA_00295 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_00295 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_00295 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_00295 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_00295 IPR000951 Phthalate dioxygenase reductase AFA_00300 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AFA_00300 IPR017639 Benzoate 1,2-dioxygenase, large subunit AFA_00300 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_00300 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AFA_00300 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_00300 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AFA_00305 IPR032710 NTF2-like domain superfamily AFA_00305 IPR017641 Benzoate 1,2-dioxygenase, small subunit AFA_00305 IPR000391 Ring-hydroxylating dioxygenase beta subunit AFA_00310 IPR020845 AMP-binding, conserved site AFA_00310 IPR000873 AMP-dependent synthetase/ligase AFA_00310 IPR025110 AMP-binding enzyme, C-terminal domain AFA_00310 IPR042099 AMP-dependent synthetase-like superfamily AFA_00310 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC AFA_00325 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_00325 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_00325 IPR036291 NAD(P)-binding domain superfamily AFA_00325 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_00330 IPR011701 Major facilitator superfamily AFA_00330 IPR036259 MFS transporter superfamily AFA_00330 IPR020846 Major facilitator superfamily domain AFA_00335 IPR009061 Putative DNA-binding domain superfamily AFA_00335 IPR015358 Transcription regulator MerR, DNA binding AFA_00335 IPR011789 Cu(I)-responsive transcriptional regulator AFA_00335 IPR000551 MerR-type HTH domain AFA_00345 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_00345 IPR004681 TRAP transporter large membrane protein DctM AFA_00365 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_00365 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_00365 IPR036291 NAD(P)-binding domain superfamily AFA_00375 IPR012349 FMN-binding split barrel AFA_00375 IPR002563 Flavin reductase like domain AFA_00375 IPR036390 Winged helix DNA-binding domain superfamily AFA_00375 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00385 IPR018060 DNA binding HTH domain, AraC-type AFA_00385 IPR018062 HTH domain AraC-type, conserved site AFA_00385 IPR009057 Homeobox-like domain superfamily AFA_00385 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AFA_00385 IPR037923 Transcription regulator HTH-like AFA_00390 IPR012349 FMN-binding split barrel AFA_00390 IPR002563 Flavin reductase like domain AFA_00395 IPR017871 ABC transporter, conserved site AFA_00395 IPR003439 ABC transporter-like AFA_00395 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AFA_00395 IPR003593 AAA+ ATPase domain AFA_00395 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00405 IPR009010 Aspartate decarboxylase-like domain superfamily AFA_00405 IPR003190 Aspartate decarboxylase AFA_00410 IPR003439 ABC transporter-like AFA_00410 IPR017871 ABC transporter, conserved site AFA_00410 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AFA_00410 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00410 IPR003593 AAA+ ATPase domain AFA_00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00415 IPR003593 AAA+ ATPase domain AFA_00415 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AFA_00415 IPR017871 ABC transporter, conserved site AFA_00415 IPR003439 ABC transporter-like AFA_00420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_00420 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AFA_00420 IPR035906 MetI-like superfamily AFA_00430 IPR000914 Solute-binding protein family 5 domain AFA_00430 IPR039424 Solute-binding protein family 5 AFA_00430 IPR030678 Peptide/nickel binding protein, MppA-type AFA_00435 IPR001126 UmuC domain AFA_00435 IPR022880 DNA polymerase IV AFA_00435 IPR017961 DNA polymerase, Y-family, little finger domain AFA_00435 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AFA_00440 IPR007627 RNA polymerase sigma-70 region 2 AFA_00440 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AFA_00440 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_00440 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00440 IPR039425 RNA polymerase sigma-70 like AFA_00440 IPR014284 RNA polymerase sigma-70 like domain AFA_00440 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AFA_00440 IPR013325 RNA polymerase sigma factor, region 2 AFA_00445 IPR006860 FecR protein AFA_00445 IPR032623 FecR, N-terminal AFA_00445 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AFA_00450 IPR012910 TonB-dependent receptor, plug domain AFA_00450 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_00450 IPR039423 TonB-dependent receptor-like AFA_00450 IPR010916 TonB box, conserved site AFA_00450 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_00450 IPR010917 TonB-dependent receptor, conserved site AFA_00450 IPR010105 TonB-dependent siderophore receptor AFA_00450 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_00455 IPR001466 Beta-lactamase-related AFA_00455 IPR012338 Beta-lactamase/transpeptidase-like AFA_00455 IPR021860 Peptidase S12, Pab87-related, C-terminal AFA_00460 IPR015424 Pyridoxal phosphate-dependent transferase AFA_00460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_00460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_00460 IPR005814 Aminotransferase class-III AFA_00460 IPR004636 Acetylornithine/Succinylornithine transaminase family AFA_00475 IPR004872 Lipoprotein NlpA family AFA_00480 IPR004872 Lipoprotein NlpA family AFA_00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00485 IPR018449 NIL domain AFA_00485 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain AFA_00485 IPR003593 AAA+ ATPase domain AFA_00485 IPR026253 Methionine import ATP-binding protein MetN AFA_00485 IPR003439 ABC transporter-like AFA_00485 IPR017871 ABC transporter, conserved site AFA_00485 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal AFA_00490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_00490 IPR035906 MetI-like superfamily AFA_00495 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AFA_00495 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_00495 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_00495 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_00495 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_00500 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_00500 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_00500 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_00500 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_00500 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AFA_00500 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_00505 IPR011251 Luciferase-like domain AFA_00505 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A AFA_00505 IPR036661 Luciferase-like domain superfamily AFA_00510 IPR004872 Lipoprotein NlpA family AFA_00515 IPR011251 Luciferase-like domain AFA_00515 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A AFA_00515 IPR036661 Luciferase-like domain superfamily AFA_00520 IPR004872 Lipoprotein NlpA family AFA_00535 IPR011251 Luciferase-like domain AFA_00535 IPR036661 Luciferase-like domain superfamily AFA_00535 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent AFA_00540 IPR019912 FMN reductase, MsuE-like AFA_00540 IPR005025 NADPH-dependent FMN reductase-like AFA_00540 IPR029039 Flavoprotein-like superfamily AFA_00550 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AFA_00550 IPR018060 DNA binding HTH domain, AraC-type AFA_00550 IPR020449 Transcription regulator HTH, AraC- type AFA_00550 IPR018062 HTH domain AraC-type, conserved site AFA_00550 IPR009057 Homeobox-like domain superfamily AFA_00560 IPR000847 Transcription regulator HTH, LysR AFA_00560 IPR005119 LysR, substrate-binding AFA_00560 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00560 IPR036390 Winged helix DNA-binding domain superfamily AFA_00565 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AFA_00565 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AFA_00565 IPR013785 Aldolase-type TIM barrel AFA_00565 IPR006242 Putative pyrophosphorylase ModD AFA_00565 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AFA_00565 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AFA_00565 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AFA_00570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_00570 IPR011867 Molybdate ABC transporter, permease protein AFA_00570 IPR035906 MetI-like superfamily AFA_00580 IPR006253 Malate synthase G AFA_00580 IPR023310 Malate synthase G, beta sub-domain AFA_00580 IPR011076 Malate synthase-like superfamily AFA_00580 IPR001465 Malate synthase AFA_00590 IPR018953 AMP nucleoside phosphorylase, N-terminal AFA_00590 IPR011271 AMP nucleosidase AFA_00590 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily AFA_00590 IPR035994 Nucleoside phosphorylase superfamily AFA_00590 IPR000845 Nucleoside phosphorylase domain AFA_00595 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_00595 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_00595 IPR004682 TRAP transporter solute receptor, DctP family AFA_00600 IPR004681 TRAP transporter large membrane protein DctM AFA_00600 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_00615 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AFA_00615 IPR039368 Acetolactate synthase large subunit, TPP binding domain AFA_00615 IPR029035 DHS-like NAD/FAD-binding domain superfamily AFA_00615 IPR012846 Acetolactate synthase, large subunit, biosynthetic AFA_00615 IPR012000 Thiamine pyrophosphate enzyme, central domain AFA_00615 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AFA_00615 IPR000399 TPP-binding enzyme, conserved site AFA_00615 IPR029061 Thiamin diphosphate-binding fold AFA_00620 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_00620 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_00620 IPR004682 TRAP transporter solute receptor, DctP family AFA_00630 IPR004681 TRAP transporter large membrane protein DctM AFA_00630 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_00645 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AFA_00645 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AFA_00645 IPR013497 DNA topoisomerase, type IA, central AFA_00645 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AFA_00645 IPR005738 DNA topoisomerase III AFA_00645 IPR006171 TOPRIM domain AFA_00645 IPR000380 DNA topoisomerase, type IA AFA_00645 IPR034144 DNA topoisomerase 3-like, TOPRIM domain AFA_00645 IPR023406 DNA topoisomerase, type IA, active site AFA_00645 IPR023405 DNA topoisomerase, type IA, core domain AFA_00645 IPR003601 DNA topoisomerase, type IA, domain 2 AFA_00645 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AFA_00660 IPR007456 Smg AFA_00665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_00665 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AFA_00665 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AFA_00665 IPR022380 Glutamyl-Q tRNA(Asp) synthetase AFA_00670 IPR005482 Biotin carboxylase, C-terminal AFA_00670 IPR011764 Biotin carboxylation domain AFA_00670 IPR011054 Rudiment single hybrid motif AFA_00670 IPR000089 Biotin/lipoyl attachment AFA_00670 IPR001882 Biotin-binding site AFA_00670 IPR005481 Biotin carboxylase-like, N-terminal domain AFA_00670 IPR011761 ATP-grasp fold AFA_00670 IPR011053 Single hybrid motif AFA_00670 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AFA_00670 IPR016185 Pre-ATP-grasp domain superfamily AFA_00675 IPR029045 ClpP/crotonase-like domain superfamily AFA_00675 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AFA_00675 IPR034733 Acetyl-CoA carboxylase AFA_00675 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AFA_00680 IPR016039 Thiolase-like AFA_00680 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_00680 IPR020617 Thiolase, C-terminal AFA_00680 IPR020613 Thiolase, conserved site AFA_00680 IPR020616 Thiolase, N-terminal AFA_00680 IPR002155 Thiolase AFA_00680 IPR020610 Thiolase, active site AFA_00685 IPR010452 Isocitrate dehydrogenase kinasephosphatase AFA_00690 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_00690 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_00690 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_00690 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_00690 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_00690 IPR006089 Acyl-CoA dehydrogenase, conserved site AFA_00690 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_00695 IPR000551 MerR-type HTH domain AFA_00695 IPR009061 Putative DNA-binding domain superfamily AFA_00695 IPR015358 Transcription regulator MerR, DNA binding AFA_00695 IPR011789 Cu(I)-responsive transcriptional regulator AFA_00705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_00705 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AFA_00705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_00705 IPR015424 Pyridoxal phosphate-dependent transferase AFA_00705 IPR006233 Cystathionine beta-lyase, bacterial AFA_00710 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AFA_00710 IPR013766 Thioredoxin domain AFA_00710 IPR017937 Thioredoxin, conserved site AFA_00710 IPR001853 DSBA-like thioredoxin domain AFA_00710 IPR036249 Thioredoxin-like superfamily AFA_00720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_00720 IPR008909 DALR anticodon binding AFA_00720 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AFA_00720 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AFA_00720 IPR001278 Arginine-tRNA ligase AFA_00720 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AFA_00720 IPR005148 Arginyl tRNA synthetase N-terminal domain AFA_00720 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_00750 IPR000891 Pyruvate carboxyltransferase AFA_00750 IPR039371 LeuA, N-terminal catalytic TIM barrel domain AFA_00750 IPR005668 2-isopropylmalate synthase AFA_00750 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AFA_00750 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AFA_00750 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AFA_00750 IPR013785 Aldolase-type TIM barrel AFA_00760 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AFA_00760 IPR007634 RNA polymerase sigma factor 54, DNA-binding AFA_00760 IPR007046 RNA polymerase sigma factor 54, core-binding domain AFA_00760 IPR000394 RNA polymerase sigma factor 54 AFA_00765 IPR010105 TonB-dependent siderophore receptor AFA_00765 IPR012910 TonB-dependent receptor, plug domain AFA_00765 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_00765 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_00765 IPR039423 TonB-dependent receptor-like AFA_00765 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_00765 IPR010916 TonB box, conserved site AFA_00765 IPR030149 TonB-dependent siderophore receptor FcuA/FatA AFA_00765 IPR010917 TonB-dependent receptor, conserved site AFA_00770 IPR004431 3-isopropylmalate dehydratase, small subunit AFA_00770 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AFA_00770 IPR033940 3-isopropylmalate dehydratase, swivel domain AFA_00770 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AFA_00775 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AFA_00775 IPR004430 3-isopropylmalate dehydratase, large subunit AFA_00775 IPR018136 Aconitase family, 4Fe-4S cluster binding site AFA_00775 IPR036008 Aconitase, iron-sulfur domain AFA_00775 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AFA_00775 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AFA_00780 IPR000891 Pyruvate carboxyltransferase AFA_00780 IPR013785 Aldolase-type TIM barrel AFA_00785 IPR003673 CoA-transferase family III AFA_00785 IPR023606 CoA-transferase family III domain superfamily AFA_00790 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_00790 IPR004681 TRAP transporter large membrane protein DctM AFA_00800 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_00800 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_00800 IPR004682 TRAP transporter solute receptor, DctP family AFA_00805 IPR036380 Isochorismatase-like superfamily AFA_00805 IPR000868 Isochorismatase-like AFA_00810 IPR005119 LysR, substrate-binding AFA_00810 IPR000847 Transcription regulator HTH, LysR AFA_00810 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00810 IPR036390 Winged helix DNA-binding domain superfamily AFA_00810 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain AFA_00820 IPR009078 Ferritin-like superfamily AFA_00820 IPR008331 Ferritin/DPS protein domain AFA_00820 IPR012347 Ferritin-like AFA_00820 IPR002024 Bacterioferritin AFA_00820 IPR009040 Ferritin-like diiron domain AFA_00830 IPR009000 Translation protein, beta-barrel domain superfamily AFA_00830 IPR000795 Transcription factor, GTP-binding domain AFA_00830 IPR005225 Small GTP-binding protein domain AFA_00830 IPR041732 Peptide chain release factor 3, GTP-binding domain AFA_00830 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AFA_00830 IPR032090 Peptide chain release factor 3, C-terminal AFA_00830 IPR004548 Peptide chain release factor 3 AFA_00830 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00830 IPR031157 Tr-type G domain, conserved site AFA_00830 IPR004161 Translation elongation factor EFTu-like, domain 2 AFA_00830 IPR035647 EF-G domain III/V-like AFA_00835 IPR001123 Amino acid exporter protein, LeuE-type AFA_00840 IPR001650 Helicase, C-terminal AFA_00840 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AFA_00840 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_00840 IPR028622 ATP-dependent RNA helicase RhlE AFA_00840 IPR014014 RNA helicase, DEAD-box type, Q motif AFA_00840 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00840 IPR011545 DEAD/DEAH box helicase domain AFA_00850 IPR007621 TPM domain AFA_00865 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AFA_00865 IPR018948 GTP-binding protein TrmE, N-terminal AFA_00865 IPR031168 TrmE-type guanine nucleotide-binding domain AFA_00865 IPR027368 tRNA modification GTPase MnmE domain 2 AFA_00865 IPR005225 Small GTP-binding protein domain AFA_00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00865 IPR025867 MnmE, helical domain AFA_00865 IPR004520 tRNA modification GTPase MnmE AFA_00865 IPR006073 GTP binding domain AFA_00885 IPR005119 LysR, substrate-binding AFA_00885 IPR020890 Transcription regulator HTH, HdfR AFA_00885 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00885 IPR036390 Winged helix DNA-binding domain superfamily AFA_00885 IPR000847 Transcription regulator HTH, LysR AFA_00905 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_00905 IPR004681 TRAP transporter large membrane protein DctM AFA_00915 IPR030802 ABC transporter permease MalE AFA_00915 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AFA_00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_00920 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AFA_00920 IPR003439 ABC transporter-like AFA_00920 IPR003593 AAA+ ATPase domain AFA_00920 IPR017871 ABC transporter, conserved site AFA_00940 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AFA_00940 IPR036412 HAD-like superfamily AFA_00940 IPR006439 HAD hydrolase, subfamily IA AFA_00940 IPR023214 HAD superfamily AFA_00940 IPR041492 Haloacid dehalogenase-like hydrolase AFA_00945 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_00945 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_00955 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_00955 IPR004681 TRAP transporter large membrane protein DctM AFA_00970 IPR042099 AMP-dependent synthetase-like superfamily AFA_00970 IPR025110 AMP-binding enzyme, C-terminal domain AFA_00970 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC AFA_00970 IPR000873 AMP-dependent synthetase/ligase AFA_00970 IPR020845 AMP-binding, conserved site AFA_00975 IPR042100 Bordetella uptake gene, domain 1 AFA_00975 IPR005064 Bordetella uptake gene AFA_00985 IPR036390 Winged helix DNA-binding domain superfamily AFA_00985 IPR011711 GntR, C-terminal AFA_00985 IPR008920 Transcription regulator FadR/GntR, C-terminal AFA_00985 IPR000524 Transcription regulator HTH, GntR AFA_00985 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00990 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_00990 IPR005119 LysR, substrate-binding AFA_00990 IPR000847 Transcription regulator HTH, LysR AFA_00990 IPR037414 Transcriptional activator protein LysR, PBP2 domain AFA_00990 IPR036390 Winged helix DNA-binding domain superfamily AFA_00995 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_00995 IPR006076 FAD dependent oxidoreductase AFA_00995 IPR023080 D-amino acid dehydrogenase DadA AFA_01005 IPR003798 DNA recombination RmuC AFA_01010 IPR001633 EAL domain AFA_01010 IPR035919 EAL domain superfamily AFA_01010 IPR000160 GGDEF domain AFA_01010 IPR005330 MHYT domain AFA_01010 IPR029787 Nucleotide cyclase AFA_01015 IPR017968 Acylphosphatase, conserved site AFA_01015 IPR036046 Acylphosphatase-like domain superfamily AFA_01015 IPR020456 Acylphosphatase AFA_01015 IPR001792 Acylphosphatase-like domain AFA_01025 IPR011852 TRAP transporter solute receptor, TAXI family AFA_01035 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_01035 IPR006145 Pseudouridine synthase, RsuA/RluA AFA_01035 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AFA_01040 IPR027475 Asparaginase/glutaminase, active site 2 AFA_01040 IPR020827 Asparaginase/glutaminase, active site 1 AFA_01040 IPR027474 L-asparaginase, N-terminal AFA_01040 IPR004550 L-asparaginase, type II AFA_01040 IPR036152 Asparaginase/glutaminase-like superfamily AFA_01040 IPR006034 Asparaginase/glutaminase-like AFA_01040 IPR037152 L-asparaginase, N-terminal domain superfamily AFA_01040 IPR040919 Asparaginase/glutaminase, C-terminal AFA_01040 IPR027473 L-asparaginase, C-terminal AFA_01045 IPR035906 MetI-like superfamily AFA_01045 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_01045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_01050 IPR035906 MetI-like superfamily AFA_01050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_01050 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_01055 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_01055 IPR018313 Solute-binding protein family 3, conserved site AFA_01055 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter AFA_01055 IPR001320 Ionotropic glutamate receptor AFA_01060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01060 IPR003593 AAA+ ATPase domain AFA_01060 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AFA_01060 IPR003439 ABC transporter-like AFA_01060 IPR017871 ABC transporter, conserved site AFA_01065 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AFA_01065 IPR036291 NAD(P)-binding domain superfamily AFA_01065 IPR014362 Glutamate dehydrogenase AFA_01065 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AFA_01065 IPR033922 NAD(P) binding domain of glutamate dehydrogenase AFA_01065 IPR033524 Leu/Phe/Val dehydrogenases active site AFA_01065 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AFA_01070 IPR001608 Alanine racemase, N-terminal AFA_01070 IPR011078 Pyridoxal phosphate homeostasis protein AFA_01070 IPR029066 PLP-binding barrel AFA_01075 IPR005064 Bordetella uptake gene AFA_01075 IPR042100 Bordetella uptake gene, domain 1 AFA_01085 IPR020845 AMP-binding, conserved site AFA_01085 IPR000873 AMP-dependent synthetase/ligase AFA_01085 IPR042099 AMP-dependent synthetase-like superfamily AFA_01090 IPR003593 AAA+ ATPase domain AFA_01090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01090 IPR003439 ABC transporter-like AFA_01090 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_01090 IPR017871 ABC transporter, conserved site AFA_01095 IPR001851 ABC transporter, permease AFA_01110 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01110 IPR003593 AAA+ ATPase domain AFA_01110 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_01110 IPR003439 ABC transporter-like AFA_01110 IPR017871 ABC transporter, conserved site AFA_01120 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_01120 IPR018313 Solute-binding protein family 3, conserved site AFA_01120 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter AFA_01130 IPR013785 Aldolase-type TIM barrel AFA_01130 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site AFA_01130 IPR000891 Pyruvate carboxyltransferase AFA_01135 IPR041614 DprA, winged helix domain AFA_01135 IPR003488 DNA recombination-mediator protein A AFA_01135 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01140 IPR023635 Peptide deformylase AFA_01140 IPR036821 Peptide deformylase superfamily AFA_01145 IPR005793 Formyl transferase, C-terminal AFA_01145 IPR037022 Formyl transferase, C-terminal domain superfamily AFA_01145 IPR002376 Formyl transferase, N-terminal AFA_01145 IPR036477 Formyl transferase, N-terminal domain superfamily AFA_01145 IPR011034 Formyl transferase-like, C-terminal domain superfamily AFA_01145 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain AFA_01145 IPR005794 Methionyl-tRNA formyltransferase AFA_01145 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AFA_01150 IPR000620 EamA domain AFA_01155 IPR000120 Amidase AFA_01155 IPR023631 Amidase signature domain AFA_01155 IPR036928 Amidase signature (AS) superfamily AFA_01165 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_01165 IPR004681 TRAP transporter large membrane protein DctM AFA_01180 IPR016938 Uncharacterised protein family UPF0317 AFA_01180 IPR038021 Putative hydro-lyase AFA_01180 IPR009906 D-glutamate cyclase AFA_01185 IPR036390 Winged helix DNA-binding domain superfamily AFA_01185 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01185 IPR000847 Transcription regulator HTH, LysR AFA_01185 IPR005119 LysR, substrate-binding AFA_01190 IPR011908 Lipopolysaccharide heptosyltransferase I AFA_01190 IPR002201 Glycosyl transferase, family 9 AFA_01195 IPR039901 3-deoxy-D-manno-octulosonic acid transferase AFA_01195 IPR001296 Glycosyl transferase, family 1 AFA_01195 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal AFA_01195 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily AFA_01200 IPR012340 Nucleic acid-binding, OB-fold AFA_01200 IPR011129 Cold shock domain AFA_01200 IPR019844 Cold-shock (CSD) domain AFA_01200 IPR002059 Cold-shock protein, DNA-binding AFA_01200 IPR012156 Cold shock, CspA AFA_01205 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AFA_01205 IPR005835 Nucleotidyl transferase domain AFA_01205 IPR029044 Nucleotide-diphospho-sugar transferases AFA_01210 IPR004619 Type III pantothenate kinase AFA_01215 IPR030855 Bifunctional ligase/repressor BirA AFA_01215 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AFA_01215 IPR004409 Biotin operon repressor, helix-turn-helix domain AFA_01215 IPR003142 Biotin protein ligase, C-terminal AFA_01215 IPR008988 Transcriptional repressor, C-terminal AFA_01215 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AFA_01225 IPR012338 Beta-lactamase/transpeptidase-like AFA_01225 IPR015956 Penicillin-binding protein, C-terminal domain superfamily AFA_01225 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AFA_01225 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily AFA_01225 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AFA_01225 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AFA_01230 IPR005784 D-amino acid aminotransferase AFA_01230 IPR018300 Aminotransferase, class IV, conserved site AFA_01230 IPR036038 Aminotransferase-like, PLP-dependent enzymes AFA_01230 IPR001544 Aminotransferase class IV AFA_01235 IPR007454 Uncharacterised protein family UPF0250 AFA_01235 IPR027471 YbeD-like domain superfamily AFA_01240 IPR000544 Octanoyltransferase AFA_01240 IPR020605 Octanoyltransferase, conserved site AFA_01240 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AFA_01245 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_01245 IPR029045 ClpP/crotonase-like domain superfamily AFA_01245 IPR014748 Enoyl-CoA hydratase, C-terminal AFA_01245 IPR001753 Enoyl-CoA hydratase/isomerase AFA_01250 IPR006638 Elp3/MiaB/NifB AFA_01250 IPR003698 Lipoyl synthase AFA_01250 IPR031691 Lipoyl synthase, N-terminal AFA_01250 IPR013785 Aldolase-type TIM barrel AFA_01250 IPR007197 Radical SAM AFA_01260 IPR036895 Uracil-DNA glycosylase-like domain superfamily AFA_01260 IPR005122 Uracil-DNA glycosylase-like AFA_01260 IPR002043 Uracil-DNA glycosylase family 1 AFA_01260 IPR018085 Uracil-DNA glycosylase, active site AFA_01345 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AFA_01345 IPR013798 Indole-3-glycerol phosphate synthase AFA_01345 IPR011060 Ribulose-phosphate binding barrel AFA_01345 IPR013785 Aldolase-type TIM barrel AFA_01350 IPR005940 Anthranilate phosphoribosyl transferase AFA_01350 IPR017459 Glycosyl transferase family 3, N-terminal domain AFA_01350 IPR000312 Glycosyl transferase, family 3 AFA_01350 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AFA_01350 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AFA_01355 IPR017926 Glutamine amidotransferase AFA_01355 IPR029062 Class I glutamine amidotransferase-like AFA_01355 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AFA_01360 IPR005256 Anthranilate synthase component I, PabB-like AFA_01360 IPR006805 Anthranilate synthase component I, N-terminal AFA_01360 IPR005801 ADC synthase AFA_01360 IPR015890 Chorismate-utilising enzyme, C-terminal AFA_01360 IPR019999 Anthranilate synthase component I-like AFA_01365 IPR037512 Phosphoglycolate phosphatase, prokaryotic AFA_01365 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AFA_01365 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AFA_01365 IPR041492 Haloacid dehalogenase-like hydrolase AFA_01365 IPR006439 HAD hydrolase, subfamily IA AFA_01365 IPR023214 HAD superfamily AFA_01365 IPR036412 HAD-like superfamily AFA_01380 IPR007474 ApaG domain AFA_01380 IPR036767 ApaG domain superfamily AFA_01380 IPR023065 Uncharacterised protein family ApaG AFA_01390 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_01390 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AFA_01390 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AFA_01390 IPR002938 FAD-binding domain AFA_01395 IPR033954 Disulphide bond isomerase, DsbC/G AFA_01395 IPR036249 Thioredoxin-like superfamily AFA_01395 IPR012336 Thioredoxin-like fold AFA_01395 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AFA_01395 IPR017937 Thioredoxin, conserved site AFA_01405 IPR004090 Chemotaxis methyl-accepting receptor AFA_01405 IPR003660 HAMP domain AFA_01405 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_01405 IPR033480 Single Cache domain 2 AFA_01415 IPR036291 NAD(P)-binding domain superfamily AFA_01415 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_01415 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase AFA_01415 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_01420 IPR016291 Isochorismatase AFA_01420 IPR036380 Isochorismatase-like superfamily AFA_01420 IPR036736 ACP-like superfamily AFA_01420 IPR009081 Phosphopantetheine binding ACP domain AFA_01420 IPR000868 Isochorismatase-like AFA_01425 IPR005801 ADC synthase AFA_01425 IPR004561 Isochorismate synthase AFA_01425 IPR015890 Chorismate-utilising enzyme, C-terminal AFA_01435 IPR036259 MFS transporter superfamily AFA_01435 IPR023722 Enterobactin exporter, EntS AFA_01435 IPR020846 Major facilitator superfamily domain AFA_01435 IPR010290 Transmembrane secretion effector AFA_01440 IPR000873 AMP-dependent synthetase/ligase AFA_01440 IPR010071 Amino acid adenylation domain AFA_01440 IPR029058 Alpha/Beta hydrolase fold AFA_01440 IPR020845 AMP-binding, conserved site AFA_01440 IPR042099 AMP-dependent synthetase-like superfamily AFA_01440 IPR036736 ACP-like superfamily AFA_01440 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AFA_01440 IPR001242 Condensation domain AFA_01440 IPR025110 AMP-binding enzyme, C-terminal domain AFA_01440 IPR020802 Polyketide synthase, thioesterase domain AFA_01440 IPR009081 Phosphopantetheine binding ACP domain AFA_01440 IPR001031 Thioesterase AFA_01440 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AFA_01445 IPR000868 Isochorismatase-like AFA_01445 IPR009081 Phosphopantetheine binding ACP domain AFA_01445 IPR016291 Isochorismatase AFA_01445 IPR036736 ACP-like superfamily AFA_01445 IPR036380 Isochorismatase-like superfamily AFA_01450 IPR011963 2,3-dihydroxybenzoate-AMP ligase AFA_01450 IPR000873 AMP-dependent synthetase/ligase AFA_01450 IPR020845 AMP-binding, conserved site AFA_01450 IPR025110 AMP-binding enzyme, C-terminal domain AFA_01460 IPR003593 AAA+ ATPase domain AFA_01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01460 IPR017871 ABC transporter, conserved site AFA_01460 IPR003439 ABC transporter-like AFA_01460 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_01465 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_01465 IPR003439 ABC transporter-like AFA_01465 IPR017871 ABC transporter, conserved site AFA_01465 IPR003593 AAA+ ATPase domain AFA_01465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01480 IPR028082 Periplasmic binding protein-like I AFA_01480 IPR000709 Leu/Ile/Val-binding protein AFA_01480 IPR028081 Leucine-binding protein domain AFA_01495 IPR035906 MetI-like superfamily AFA_01495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_01500 IPR003593 AAA+ ATPase domain AFA_01500 IPR003439 ABC transporter-like AFA_01500 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01510 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AFA_01510 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AFA_01510 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_01510 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_01510 IPR029069 HotDog domain superfamily AFA_01510 IPR036291 NAD(P)-binding domain superfamily AFA_01510 IPR026578 L-carnitine dehydrogenase AFA_01530 IPR003593 AAA+ ATPase domain AFA_01530 IPR003439 ABC transporter-like AFA_01530 IPR017871 ABC transporter, conserved site AFA_01530 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01530 IPR015863 ABC transporter, hemin import, HmuV AFA_01535 IPR000522 ABC transporter, permease protein, BtuC-like AFA_01535 IPR037294 ABC transporter, BtuC-like AFA_01540 IPR029058 Alpha/Beta hydrolase fold AFA_01540 IPR000801 Putative esterase AFA_01545 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_01545 IPR001650 Helicase, C-terminal AFA_01545 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01545 IPR011545 DEAD/DEAH box helicase domain AFA_01545 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AFA_01545 IPR023554 ATP-dependent RNA helicase RhlB type AFA_01545 IPR014014 RNA helicase, DEAD-box type, Q motif AFA_01550 IPR036259 MFS transporter superfamily AFA_01550 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AFA_01550 IPR020846 Major facilitator superfamily domain AFA_01550 IPR011701 Major facilitator superfamily AFA_01560 IPR036390 Winged helix DNA-binding domain superfamily AFA_01560 IPR000847 Transcription regulator HTH, LysR AFA_01560 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01560 IPR037416 Nodulation protein D, PBP2 AFA_01560 IPR005119 LysR, substrate-binding AFA_01570 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_01570 IPR005170 Transporter-associated domain AFA_01570 IPR000644 CBS domain AFA_01570 IPR036318 FAD-binding, type PCMH-like superfamily AFA_01570 IPR005496 Integral membrane protein TerC AFA_01585 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFA_01585 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AFA_01585 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AFA_01585 IPR016039 Thiolase-like AFA_01595 IPR036038 Aminotransferase-like, PLP-dependent enzymes AFA_01595 IPR001544 Aminotransferase class IV AFA_01595 IPR018300 Aminotransferase, class IV, conserved site AFA_01600 IPR007349 Domain of unknown function DUF418 AFA_01610 IPR000182 GNAT domain AFA_01610 IPR016181 Acyl-CoA N-acyltransferase AFA_01625 IPR002563 Flavin reductase like domain AFA_01625 IPR012349 FMN-binding split barrel AFA_01630 IPR010158 Amidase, carbamoylase-type AFA_01630 IPR036264 Bacterial exopeptidase dimerisation domain AFA_01630 IPR002933 Peptidase M20 AFA_01630 IPR011650 Peptidase M20, dimerisation domain AFA_01635 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_01635 IPR032466 Metal-dependent hydrolase AFA_01635 IPR006680 Amidohydrolase-related AFA_01635 IPR017593 Allantoinase AFA_01640 IPR006680 Amidohydrolase-related AFA_01640 IPR023512 Deaminase MtaD/DadD AFA_01640 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_01640 IPR032466 Metal-dependent hydrolase AFA_01645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_01645 IPR035906 MetI-like superfamily AFA_01650 IPR003439 ABC transporter-like AFA_01650 IPR015859 ABC transporter, taurine import, TauD AFA_01650 IPR003593 AAA+ ATPase domain AFA_01650 IPR017871 ABC transporter, conserved site AFA_01650 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01660 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01660 IPR036390 Winged helix DNA-binding domain superfamily AFA_01660 IPR000847 Transcription regulator HTH, LysR AFA_01660 IPR037414 Transcriptional activator protein LysR, PBP2 domain AFA_01660 IPR005119 LysR, substrate-binding AFA_01665 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_01665 IPR018313 Solute-binding protein family 3, conserved site AFA_01670 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01670 IPR017871 ABC transporter, conserved site AFA_01670 IPR003439 ABC transporter-like AFA_01670 IPR003593 AAA+ ATPase domain AFA_01670 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AFA_01675 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_01675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_01675 IPR035906 MetI-like superfamily AFA_01680 IPR035906 MetI-like superfamily AFA_01680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_01680 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_01690 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AFA_01690 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01690 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AFA_01690 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AFA_01690 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AFA_01690 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AFA_01690 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AFA_01695 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_01695 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_01695 IPR016161 Aldehyde/histidinol dehydrogenase AFA_01695 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_01695 IPR015590 Aldehyde dehydrogenase domain AFA_01695 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_01705 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AFA_01705 IPR009451 Amine dehydrogenase heavy chain AFA_01705 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AFA_01715 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AFA_01715 IPR013478 Methylamine dehydrogenase accessory protein MauD AFA_01715 IPR013766 Thioredoxin domain AFA_01715 IPR036249 Thioredoxin-like superfamily AFA_01720 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain AFA_01720 IPR016008 Amine dehydrogenase light chain AFA_01720 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily AFA_01720 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_01730 IPR020449 Transcription regulator HTH, AraC- type AFA_01730 IPR018060 DNA binding HTH domain, AraC-type AFA_01730 IPR009057 Homeobox-like domain superfamily AFA_01730 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AFA_01740 IPR006361 Uroporphyrinogen decarboxylase HemE AFA_01740 IPR038071 UROD/MetE-like superfamily AFA_01740 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AFA_01745 IPR005259 Primosomal protein N' AFA_01745 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01745 IPR001650 Helicase, C-terminal AFA_01745 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_01745 IPR011545 DEAD/DEAH box helicase domain AFA_01745 IPR041222 Primosomal protein N', 3' DNA-binding domain AFA_01745 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily AFA_01745 IPR041236 Primosomal protein N, C-terminal domain AFA_01745 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain AFA_01750 IPR014016 UvrD-like helicase, ATP-binding domain AFA_01750 IPR013986 DExx box DNA helicase domain superfamily AFA_01750 IPR005752 ATP-dependent DNA helicase Rep AFA_01750 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01750 IPR034739 UvrD/AddA helicase, N-terminal AFA_01750 IPR014017 UvrD-like DNA helicase, C-terminal AFA_01750 IPR000212 DNA helicase, UvrD/REP type AFA_01765 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 AFA_01765 IPR009051 Alpha-helical ferredoxin AFA_01765 IPR028261 Dihydroprymidine dehydrogenase domain II AFA_01765 IPR023753 FAD/NAD(P)-binding domain AFA_01765 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_01770 IPR013785 Aldolase-type TIM barrel AFA_01770 IPR017932 Glutamine amidotransferase type 2 domain AFA_01770 IPR002489 Glutamate synthase, alpha subunit, C-terminal AFA_01770 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AFA_01770 IPR006982 Glutamate synthase, central-N AFA_01770 IPR002932 Glutamate synthase domain AFA_01770 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_01775 IPR001753 Enoyl-CoA hydratase/isomerase AFA_01775 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_01775 IPR029045 ClpP/crotonase-like domain superfamily AFA_01785 IPR003673 CoA-transferase family III AFA_01785 IPR023606 CoA-transferase family III domain superfamily AFA_01790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_01790 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AFA_01790 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AFA_01790 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC AFA_01790 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AFA_01790 IPR036291 NAD(P)-binding domain superfamily AFA_01790 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AFA_01795 IPR009056 Cytochrome c-like domain AFA_01795 IPR036909 Cytochrome c-like domain superfamily AFA_01795 IPR002323 Cytochrome c, class IE AFA_01810 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_01810 IPR012910 TonB-dependent receptor, plug domain AFA_01810 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_01810 IPR039426 Vitamin B12 transporter BtuB-like AFA_01815 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AFA_01815 IPR007370 Glutamate--cysteine ligase AFA_01815 IPR006334 Glutamate--cysteine ligase, monofunctional AFA_01825 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01825 IPR000792 Transcription regulator LuxR, C-terminal AFA_01825 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AFA_01825 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AFA_01825 IPR016032 Signal transduction response regulator, C-terminal effector AFA_01830 IPR000073 Alpha/beta hydrolase fold-1 AFA_01830 IPR008220 Homoserine/serine acetyltransferase MetX-like AFA_01830 IPR029058 Alpha/Beta hydrolase fold AFA_01840 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 AFA_01840 IPR011701 Major facilitator superfamily AFA_01840 IPR020846 Major facilitator superfamily domain AFA_01840 IPR036259 MFS transporter superfamily AFA_01845 IPR005115 Uncharacterised domain UPF0126 AFA_01850 IPR005261 Conserved hypothetical protein CHP00659 AFA_01850 IPR007300 CidB/LrgB family AFA_01860 IPR006175 YjgF/YER057c/UK114 family AFA_01860 IPR035959 RutC-like superfamily AFA_01860 IPR019897 RidA, conserved site AFA_01860 IPR006056 RidA family AFA_01865 IPR006056 RidA family AFA_01865 IPR019897 RidA, conserved site AFA_01865 IPR035959 RutC-like superfamily AFA_01865 IPR006175 YjgF/YER057c/UK114 family AFA_01875 IPR001789 Signal transduction response regulator, receiver domain AFA_01875 IPR011006 CheY-like superfamily AFA_01900 IPR004778 Homoserine/Threonine efflux protein AFA_01900 IPR001123 Amino acid exporter protein, LeuE-type AFA_01905 IPR002318 Alanine-tRNA ligase, class IIc AFA_01905 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AFA_01905 IPR009000 Translation protein, beta-barrel domain superfamily AFA_01905 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AFA_01905 IPR003156 DHHA1 domain AFA_01905 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AFA_01905 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AFA_01905 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AFA_01905 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AFA_01910 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01910 IPR000847 Transcription regulator HTH, LysR AFA_01910 IPR005119 LysR, substrate-binding AFA_01910 IPR036390 Winged helix DNA-binding domain superfamily AFA_01920 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_01920 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_01920 IPR015424 Pyridoxal phosphate-dependent transferase AFA_01920 IPR005814 Aminotransferase class-III AFA_01935 IPR016030 Cobalamin adenosyltransferase-like AFA_01935 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type AFA_01935 IPR036451 Cobalamin adenosyltransferase-like superfamily AFA_01950 IPR003593 AAA+ ATPase domain AFA_01950 IPR003959 ATPase, AAA-type, core AFA_01950 IPR019489 Clp ATPase, C-terminal AFA_01950 IPR004491 Heat shock protein HslU AFA_01950 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01955 IPR022281 ATP-dependent protease, HslV subunit AFA_01955 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_01955 IPR023333 Proteasome B-type subunit AFA_01955 IPR001353 Proteasome, subunit alpha/beta AFA_01965 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AFA_01965 IPR012784 RNA polymerase-binding transcription factor DksA AFA_01965 IPR000962 Zinc finger, DksA/TraR C4-type AFA_01965 IPR037187 DksA, N-terminal domain superfamily AFA_01970 IPR036627 CobW-like, C-terminal domain superfamily AFA_01970 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AFA_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01970 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AFA_01975 IPR002481 Ferric-uptake regulator AFA_01975 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_01975 IPR036390 Winged helix DNA-binding domain superfamily AFA_01980 IPR003439 ABC transporter-like AFA_01980 IPR003593 AAA+ ATPase domain AFA_01980 IPR017871 ABC transporter, conserved site AFA_01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_01985 IPR037294 ABC transporter, BtuC-like AFA_01985 IPR001626 ABC transporter, TroCD-like AFA_01990 IPR006127 Periplasmic solute binding protein, ZnuA-like AFA_01990 IPR006129 Adhesin B AFA_01990 IPR006128 Adhesion lipoprotein AFA_01995 IPR002104 Integrase, catalytic domain AFA_01995 IPR011010 DNA breaking-rejoining enzyme, catalytic core AFA_01995 IPR010998 Integrase/recombinase, N-terminal AFA_01995 IPR013762 Integrase-like, catalytic domain superfamily AFA_01995 IPR004107 Integrase, SAM-like, N-terminal AFA_01995 IPR011931 Tyrosine recombinase XerC AFA_01995 IPR023009 Tyrosine recombinase XerC/XerD AFA_02005 IPR018510 Diaminopimelate epimerase, active site AFA_02005 IPR001653 Diaminopimelate epimerase, DapF AFA_02010 IPR004960 Bacterial lipid A biosynthesis acyltransferase AFA_02010 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AFA_02020 IPR022636 S-adenosylmethionine synthetase superfamily AFA_02020 IPR002133 S-adenosylmethionine synthetase AFA_02020 IPR022631 S-adenosylmethionine synthetase, conserved site AFA_02020 IPR022630 S-adenosylmethionine synthetase, C-terminal AFA_02020 IPR022628 S-adenosylmethionine synthetase, N-terminal AFA_02020 IPR022629 S-adenosylmethionine synthetase, central domain AFA_02025 IPR000043 Adenosylhomocysteinase-like AFA_02025 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AFA_02025 IPR036291 NAD(P)-binding domain superfamily AFA_02025 IPR042172 Adenosylhomocysteinase-like superfamily AFA_02025 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site AFA_02030 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV AFA_02035 IPR029041 FAD-linked oxidoreductase-like AFA_02035 IPR004620 5,10-methylenetetrahydrofolate reductase AFA_02035 IPR003171 Methylenetetrahydrofolate reductase AFA_02045 IPR023346 Lysozyme-like domain superfamily AFA_02045 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily AFA_02045 IPR012289 Lytic transglycosylase, superhelical linker AFA_02045 IPR008939 Lytic transglycosylase, superhelical U-shaped AFA_02045 IPR000189 Prokaryotic transglycosylase, active site AFA_02045 IPR008258 Transglycosylase SLT domain 1 AFA_02050 IPR012006 tRNA nucleotidyltransferase, proteobacteria AFA_02050 IPR002646 Poly A polymerase, head domain AFA_02050 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AFA_02065 IPR002903 Ribosomal RNA small subunit methyltransferase H AFA_02065 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily AFA_02065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_02070 IPR002781 Transmembrane protein TauE-like AFA_02075 IPR021135 Phosphoenolpyruvate carboxylase AFA_02075 IPR033129 Phosphoenolpyruvate carboxylase, His active site AFA_02075 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site AFA_02075 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_02075 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type AFA_02080 IPR004404 Dihydroxy-acid dehydratase AFA_02080 IPR042096 Dihydroxy-acid dehydratase, C-terminal AFA_02080 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AFA_02080 IPR037237 IlvD/EDD, N-terminal domain AFA_02080 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AFA_02090 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_02090 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_02090 IPR004682 TRAP transporter solute receptor, DctP family AFA_02100 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_02100 IPR004681 TRAP transporter large membrane protein DctM AFA_02105 IPR000120 Amidase AFA_02105 IPR036928 Amidase signature (AS) superfamily AFA_02105 IPR023631 Amidase signature domain AFA_02105 IPR020556 Amidase, conserved site AFA_02115 IPR003694 NAD(+) synthetase AFA_02115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_02115 IPR022310 NAD/GMP synthase AFA_02115 IPR022926 NH(3)-dependent NAD(+) synthetase AFA_02125 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_02125 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_02125 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_02125 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_02125 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_02125 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_02130 IPR003673 CoA-transferase family III AFA_02130 IPR023606 CoA-transferase family III domain superfamily AFA_02135 IPR042100 Bordetella uptake gene, domain 1 AFA_02135 IPR005064 Bordetella uptake gene AFA_02145 IPR002549 Transmembrane protein TqsA-like AFA_02155 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AFA_02155 IPR003356 DNA methylase, adenine-specific AFA_02155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_02165 IPR040980 SWI2/SNF2 ATPase AFA_02165 IPR021810 Protein of unknown function DUF3387 AFA_02165 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_02165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02165 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AFA_02165 IPR004473 Restriction endonuclease, type I, HsdR AFA_02190 IPR042100 Bordetella uptake gene, domain 1 AFA_02190 IPR005064 Bordetella uptake gene AFA_02195 IPR036390 Winged helix DNA-binding domain superfamily AFA_02195 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_02195 IPR000835 MarR-type HTH domain AFA_02195 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02200 IPR017938 Riboflavin synthase-like beta-barrel AFA_02200 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_02200 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_02200 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_02200 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_02200 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_02200 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_02200 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_02200 IPR012675 Beta-grasp domain superfamily AFA_02200 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_02210 IPR016166 FAD-binding domain, PCMH-type AFA_02210 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal AFA_02210 IPR016164 FAD-linked oxidase-like, C-terminal AFA_02210 IPR012256 D-lactate dehydrogenase AFA_02210 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 AFA_02210 IPR016167 FAD-binding, type PCMH, subdomain 1 AFA_02210 IPR036318 FAD-binding, type PCMH-like superfamily AFA_02210 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_02210 IPR006094 FAD linked oxidase, N-terminal AFA_02210 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 AFA_02215 IPR000262 FMN-dependent dehydrogenase AFA_02215 IPR013785 Aldolase-type TIM barrel AFA_02215 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AFA_02215 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AFA_02215 IPR037396 FMN hydroxy acid dehydrogenase domain AFA_02215 IPR020920 L-lactate dehydrogenase, bacterial AFA_02220 IPR008920 Transcription regulator FadR/GntR, C-terminal AFA_02220 IPR000524 Transcription regulator HTH, GntR AFA_02220 IPR036390 Winged helix DNA-binding domain superfamily AFA_02220 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02220 IPR011711 GntR, C-terminal AFA_02225 IPR003804 L-lactate permease AFA_02235 IPR011663 UbiC transcription regulator-associated AFA_02235 IPR000524 Transcription regulator HTH, GntR AFA_02235 IPR010248 Histidine utilization repressor AFA_02235 IPR036390 Winged helix DNA-binding domain superfamily AFA_02235 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02235 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AFA_02240 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AFA_02240 IPR019888 Transcription regulator AsnC-type AFA_02240 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AFA_02240 IPR011991 ArsR-like helix-turn-helix domain AFA_02240 IPR000485 AsnC-type HTH domain AFA_02240 IPR011008 Dimeric alpha-beta barrel AFA_02240 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02240 IPR036390 Winged helix DNA-binding domain superfamily AFA_02245 IPR015424 Pyridoxal phosphate-dependent transferase AFA_02245 IPR010111 Kynureninase AFA_02245 IPR000192 Aminotransferase class V domain AFA_02245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_02245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_02250 IPR004841 Amino acid permease/ SLC12A domain AFA_02250 IPR004840 Amino acid permease, conserved site AFA_02255 IPR033932 YtcJ like AFA_02255 IPR032466 Metal-dependent hydrolase AFA_02255 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_02255 IPR013108 Amidohydrolase 3 AFA_02260 IPR036390 Winged helix DNA-binding domain superfamily AFA_02260 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02260 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AFA_02260 IPR037171 NagB/RpiA transferase-like AFA_02260 IPR001034 DeoR-type HTH domain AFA_02260 IPR014036 DeoR C-terminal sensor domain AFA_02265 IPR017871 ABC transporter, conserved site AFA_02265 IPR003593 AAA+ ATPase domain AFA_02265 IPR008995 Molybdate/tungstate binding, C-terminal AFA_02265 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02265 IPR013611 Transport-associated OB, type 2 AFA_02265 IPR003439 ABC transporter-like AFA_02270 IPR006059 Bacterial extracellular solute-binding protein AFA_02270 IPR006061 Solute-binding family 1, conserved site AFA_02275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_02275 IPR035906 MetI-like superfamily AFA_02280 IPR035906 MetI-like superfamily AFA_02280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_02295 IPR005496 Integral membrane protein TerC AFA_02295 IPR022301 Integral membrane protein YjbE AFA_02300 IPR037041 Trigger factor, C-terminal domain superfamily AFA_02300 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AFA_02300 IPR023059 Foldase protein PrsA AFA_02300 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AFA_02300 IPR008880 Trigger factor, C-terminal AFA_02300 IPR027304 Trigger factor/SurA domain superfamily AFA_02310 IPR003791 Protein of unknown function UPF0178 AFA_02320 IPR003607 HD/PDEase domain AFA_02320 IPR006674 HD domain AFA_02325 IPR005064 Bordetella uptake gene AFA_02325 IPR042100 Bordetella uptake gene, domain 1 AFA_02330 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AFA_02330 IPR036849 Enolase-like, C-terminal domain superfamily AFA_02330 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AFA_02330 IPR034618 D-galactarolactone cycloisomerase AFA_02330 IPR029017 Enolase-like, N-terminal AFA_02330 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AFA_02330 IPR029065 Enolase C-terminal domain-like AFA_02335 IPR025708 Heat shock protein 15 AFA_02335 IPR002942 RNA-binding S4 domain AFA_02335 IPR036986 RNA-binding S4 domain superfamily AFA_02340 IPR004638 Drug resistance transporter EmrB-like AFA_02340 IPR020846 Major facilitator superfamily domain AFA_02340 IPR036259 MFS transporter superfamily AFA_02340 IPR011701 Major facilitator superfamily AFA_02345 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AFA_02345 IPR001647 DNA-binding HTH domain, TetR-type AFA_02345 IPR009057 Homeobox-like domain superfamily AFA_02355 IPR036928 Amidase signature (AS) superfamily AFA_02355 IPR020556 Amidase, conserved site AFA_02355 IPR023631 Amidase signature domain AFA_02355 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AFA_02355 IPR000120 Amidase AFA_02360 IPR042100 Bordetella uptake gene, domain 1 AFA_02360 IPR005064 Bordetella uptake gene AFA_02365 IPR000847 Transcription regulator HTH, LysR AFA_02365 IPR036390 Winged helix DNA-binding domain superfamily AFA_02365 IPR005119 LysR, substrate-binding AFA_02365 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain AFA_02365 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_02390 IPR003594 Histidine kinase/HSP90-like ATPase AFA_02390 IPR020575 Heat shock protein Hsp90, N-terminal AFA_02390 IPR001404 Heat shock protein Hsp90 family AFA_02390 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_02390 IPR037196 HSP90, C-terminal domain AFA_02390 IPR019805 Heat shock protein Hsp90, conserved site AFA_02395 IPR010105 TonB-dependent siderophore receptor AFA_02395 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_02395 IPR030148 Catecholate siderophore receptor Fiu AFA_02395 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_02395 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_02395 IPR039423 TonB-dependent receptor-like AFA_02395 IPR012910 TonB-dependent receptor, plug domain AFA_02400 IPR023550 PKHD-type hydroxylase AFA_02400 IPR041097 PKHD-type hydroxylase C-terminal domain AFA_02400 IPR005123 Oxoglutarate/iron-dependent dioxygenase AFA_02400 IPR006620 Prolyl 4-hydroxylase, alpha subunit AFA_02405 IPR013785 Aldolase-type TIM barrel AFA_02405 IPR037396 FMN hydroxy acid dehydrogenase domain AFA_02405 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AFA_02405 IPR000262 FMN-dependent dehydrogenase AFA_02405 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AFA_02410 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily AFA_02410 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AFA_02425 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AFA_02425 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02425 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily AFA_02425 IPR013822 Signal recognition particle SRP54, helical bundle AFA_02425 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AFA_02425 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AFA_02425 IPR004780 Signal recognition particle protein AFA_02425 IPR022941 Signal recognition particle, SRP54 subunit AFA_02425 IPR003593 AAA+ ATPase domain AFA_02435 IPR014004 Transport-associated and nodulation domain, bacteria AFA_02435 IPR018392 LysM domain AFA_02435 IPR007055 BON domain AFA_02435 IPR036779 LysM domain superfamily AFA_02440 IPR008867 Thiazole synthase AFA_02440 IPR003749 Sulfur carrier ThiS/MoaD-like AFA_02440 IPR012675 Beta-grasp domain superfamily AFA_02440 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AFA_02440 IPR010035 ThiS, thiamine-biosynthesis AFA_02440 IPR013785 Aldolase-type TIM barrel AFA_02440 IPR033983 Thiazole synthase ThiG AFA_02445 IPR029058 Alpha/Beta hydrolase fold AFA_02445 IPR000073 Alpha/beta hydrolase fold-1 AFA_02445 IPR002410 Peptidase S33 AFA_02445 IPR005944 Proline iminopeptidase AFA_02450 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type AFA_02450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_02490 IPR000847 Transcription regulator HTH, LysR AFA_02490 IPR036390 Winged helix DNA-binding domain superfamily AFA_02490 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02490 IPR005119 LysR, substrate-binding AFA_02495 IPR004837 Sodium/calcium exchanger membrane region AFA_02495 IPR004713 Calcium/proton exchanger AFA_02500 IPR001789 Signal transduction response regulator, receiver domain AFA_02500 IPR000160 GGDEF domain AFA_02500 IPR011006 CheY-like superfamily AFA_02500 IPR029787 Nucleotide cyclase AFA_02505 IPR014440 HCCA isomerase/glutathione S-transferase kappa AFA_02505 IPR036249 Thioredoxin-like superfamily AFA_02505 IPR001853 DSBA-like thioredoxin domain AFA_02510 IPR005829 Sugar transporter, conserved site AFA_02510 IPR004736 MFS transporter, metabolite:H symporter AFA_02510 IPR036259 MFS transporter superfamily AFA_02510 IPR005828 Major facilitator, sugar transporter-like AFA_02510 IPR020846 Major facilitator superfamily domain AFA_02510 IPR011701 Major facilitator superfamily AFA_02515 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AFA_02515 IPR001303 Class II aldolase/adducin N-terminal AFA_02525 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AFA_02525 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AFA_02530 IPR016192 APOBEC/CMP deaminase, zinc-binding AFA_02530 IPR016193 Cytidine deaminase-like AFA_02530 IPR002125 Cytidine and deoxycytidylate deaminase domain AFA_02535 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein AFA_02535 IPR013096 Cupin 2, conserved barrel AFA_02535 IPR011051 RmlC-like cupin domain superfamily AFA_02535 IPR014710 RmlC-like jelly roll fold AFA_02535 IPR008579 Domain of unknown function DUF861, cupin-3 AFA_02540 IPR036390 Winged helix DNA-binding domain superfamily AFA_02540 IPR005119 LysR, substrate-binding AFA_02540 IPR000847 Transcription regulator HTH, LysR AFA_02540 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02545 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AFA_02545 IPR027469 Cation efflux transmembrane domain superfamily AFA_02545 IPR002524 Cation efflux protein AFA_02545 IPR027470 Cation efflux protein, cytoplasmic domain AFA_02550 IPR033911 Methioninyl-tRNA synthetase core domain AFA_02550 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AFA_02550 IPR015413 Methionyl/Leucyl tRNA synthetase AFA_02550 IPR014758 Methionyl-tRNA synthetase AFA_02550 IPR002547 tRNA-binding domain AFA_02550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_02550 IPR029038 Methionyl-tRNA synthetase, Zn-domain AFA_02550 IPR023458 Methionine-tRNA ligase, type 1 AFA_02550 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal AFA_02550 IPR012340 Nucleic acid-binding, OB-fold AFA_02550 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_02550 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain AFA_02560 IPR000808 Mrp, conserved site AFA_02560 IPR019591 Mrp/NBP35 ATP-binding protein AFA_02560 IPR034904 Fe-S cluster assembly domain superfamily AFA_02560 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02560 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AFA_02575 IPR033704 dUTPase, trimeric AFA_02575 IPR036157 dUTPase-like superfamily AFA_02575 IPR029054 dUTPase-like AFA_02575 IPR011962 dCTP deaminase AFA_02580 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AFA_02580 IPR015424 Pyridoxal phosphate-dependent transferase AFA_02580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_02580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_02580 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AFA_02580 IPR000310 Orn/Lys/Arg decarboxylase, major domain AFA_02580 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily AFA_02580 IPR011193 Ornithine/lysine/arginine decarboxylase AFA_02585 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like AFA_02585 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_02585 IPR023166 HI0933-like insert domain superfamily AFA_02590 IPR033753 Glycine cleavage system H-protein/Simiate AFA_02590 IPR017453 Glycine cleavage system H-protein, subgroup AFA_02590 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AFA_02590 IPR000089 Biotin/lipoyl attachment AFA_02590 IPR002930 Glycine cleavage system H-protein AFA_02590 IPR011053 Single hybrid motif AFA_02595 IPR012259 Dihydrofolate reductase AFA_02595 IPR017925 Dihydrofolate reductase conserved site AFA_02595 IPR001796 Dihydrofolate reductase domain AFA_02595 IPR024072 Dihydrofolate reductase-like domain superfamily AFA_02600 IPR000398 Thymidylate synthase AFA_02600 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily AFA_02600 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AFA_02600 IPR020940 Thymidylate synthase, active site AFA_02605 IPR015946 K homology domain-like, alpha/beta AFA_02605 IPR003718 OsmC/Ohr family AFA_02605 IPR036102 OsmC/Ohr superfamily AFA_02610 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AFA_02610 IPR004677 Cytochrome c oxidase cbb3-type, subunit I AFA_02610 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AFA_02610 IPR000883 Cytochrome c oxidase subunit I AFA_02610 IPR023616 Cytochrome c oxidase-like, subunit I domain AFA_02635 IPR011566 Ubiquinone biosynthesis protein Coq7 AFA_02635 IPR009078 Ferritin-like superfamily AFA_02640 IPR015793 Pyruvate kinase, barrel AFA_02640 IPR011037 Pyruvate kinase-like, insert domain superfamily AFA_02640 IPR040442 Pyruvate kinase-like domain superfamily AFA_02640 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_02640 IPR018209 Pyruvate kinase, active site AFA_02640 IPR001697 Pyruvate kinase AFA_02640 IPR015795 Pyruvate kinase, C-terminal AFA_02640 IPR015806 Pyruvate kinase, insert domain superfamily AFA_02640 IPR036918 Pyruvate kinase, C-terminal domain superfamily AFA_02645 IPR038084 GlcG-like domain superfamily AFA_02645 IPR005624 Haem-degrading AFA_02650 IPR038614 Glycerate kinase, N-terminal domain superfamily AFA_02650 IPR037035 Glycerate kinase-like, C-terminal domain superfamily AFA_02650 IPR007835 MOFRL domain AFA_02650 IPR039760 MOFRL domain-containing protein AFA_02650 IPR025286 MOFRL-associated domain AFA_02655 IPR006398 2-hydroxy-3-oxopropionate reductase AFA_02655 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AFA_02655 IPR036291 NAD(P)-binding domain superfamily AFA_02655 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AFA_02655 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AFA_02655 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_02655 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AFA_02655 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_02660 IPR036237 Xylose isomerase-like superfamily AFA_02660 IPR017643 Hydroxypyruvate isomerase AFA_02660 IPR026040 Hydroxypyruvate isomerase-like AFA_02660 IPR013022 Xylose isomerase-like, TIM barrel domain AFA_02665 IPR029035 DHS-like NAD/FAD-binding domain superfamily AFA_02665 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AFA_02665 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AFA_02665 IPR029061 Thiamin diphosphate-binding fold AFA_02665 IPR012000 Thiamine pyrophosphate enzyme, central domain AFA_02665 IPR006397 Glyoxylate carboligase AFA_02670 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02670 IPR000847 Transcription regulator HTH, LysR AFA_02670 IPR005119 LysR, substrate-binding AFA_02670 IPR036390 Winged helix DNA-binding domain superfamily AFA_02680 IPR017588 Uric acid permease UacT-like AFA_02680 IPR006043 Xanthine/uracil/vitamin C permease AFA_02680 IPR006042 Xanthine/uracil permease AFA_02685 IPR004370 4-oxalocrotonate tautomerase AFA_02685 IPR014347 Tautomerase/MIF superfamily AFA_02685 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type AFA_02690 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AFA_02690 IPR001303 Class II aldolase/adducin N-terminal AFA_02695 IPR024060 Ureidoglycolate lyase domain superfamily AFA_02695 IPR011051 RmlC-like cupin domain superfamily AFA_02695 IPR007247 Ureidoglycolate lyase AFA_02695 IPR023525 Ureidoglycolate lyase, bacterial AFA_02700 IPR019842 Uricase, conserved site AFA_02700 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 AFA_02700 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase AFA_02700 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily AFA_02700 IPR002042 Uricase AFA_02705 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02705 IPR036390 Winged helix DNA-binding domain superfamily AFA_02705 IPR037416 Nodulation protein D, PBP2 AFA_02705 IPR000847 Transcription regulator HTH, LysR AFA_02705 IPR005119 LysR, substrate-binding AFA_02710 IPR000715 Glycosyl transferase, family 4 AFA_02715 IPR036291 NAD(P)-binding domain superfamily AFA_02715 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AFA_02715 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_02715 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase AFA_02715 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AFA_02715 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AFA_02715 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AFA_02715 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AFA_02720 IPR036291 NAD(P)-binding domain superfamily AFA_02720 IPR001509 NAD-dependent epimerase/dehydratase AFA_02730 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AFA_02730 IPR001296 Glycosyl transferase, family 1 AFA_02735 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AFA_02735 IPR001296 Glycosyl transferase, family 1 AFA_02740 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AFA_02740 IPR001296 Glycosyl transferase, family 1 AFA_02745 IPR005843 Alpha-D-phosphohexomutase, C-terminal AFA_02745 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AFA_02745 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AFA_02745 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AFA_02745 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AFA_02745 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AFA_02745 IPR016066 Alpha-D-phosphohexomutase, conserved site AFA_02745 IPR005841 Alpha-D-phosphohexomutase superfamily AFA_02750 IPR004490 Glycolate oxidase subunit GlcD AFA_02750 IPR036318 FAD-binding, type PCMH-like superfamily AFA_02750 IPR006094 FAD linked oxidase, N-terminal AFA_02750 IPR004113 FAD-linked oxidase, C-terminal AFA_02750 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AFA_02750 IPR016166 FAD-binding domain, PCMH-type AFA_02750 IPR016164 FAD-linked oxidase-like, C-terminal AFA_02760 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AFA_02760 IPR011234 Fumarylacetoacetase-like, C-terminal AFA_02765 IPR005708 Homogentisate 1,2-dioxygenase AFA_02765 IPR022950 Homogentisate 1,2-dioxygenase, bacterial AFA_02765 IPR014710 RmlC-like jelly roll fold AFA_02765 IPR011051 RmlC-like cupin domain superfamily AFA_02775 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_02775 IPR002938 FAD-binding domain AFA_02785 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AFA_02785 IPR010663 Zinc finger, FPG/IleRS-type AFA_02785 IPR010979 Ribosomal protein S13-like, H2TH AFA_02785 IPR035937 MutM-like, N-terminal AFA_02785 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AFA_02785 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AFA_02785 IPR020629 Formamidopyrimidine-DNA glycosylase AFA_02785 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AFA_02795 IPR004565 Outer membrane lipoprotein LolB AFA_02795 IPR029046 Lipoprotein localisation LolA/LolB/LppX AFA_02800 IPR013750 GHMP kinase, C-terminal domain AFA_02800 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_02800 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase AFA_02800 IPR006204 GHMP kinase N-terminal domain AFA_02800 IPR036554 GHMP kinase, C-terminal domain superfamily AFA_02800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_02810 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AFA_02810 IPR000836 Phosphoribosyltransferase domain AFA_02810 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AFA_02810 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AFA_02810 IPR029057 Phosphoribosyltransferase-like AFA_02810 IPR005946 Ribose-phosphate pyrophosphokinase AFA_02815 IPR037121 Ribosomal protein L25, C-terminal AFA_02815 IPR020055 Ribosomal protein L25, short-form AFA_02815 IPR001021 Ribosomal protein L25, long-form AFA_02815 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AFA_02815 IPR029751 Ribosomal protein L25 AFA_02815 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AFA_02815 IPR020057 Ribosomal protein L25, beta domain AFA_02820 IPR036416 Peptidyl-tRNA hydrolase superfamily AFA_02820 IPR001328 Peptidyl-tRNA hydrolase AFA_02820 IPR018171 Peptidyl-tRNA hydrolase, conserved site AFA_02830 IPR041706 YchF, N-terminal AFA_02830 IPR023192 TGS-like domain superfamily AFA_02830 IPR012676 TGS-like AFA_02830 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02830 IPR006073 GTP binding domain AFA_02830 IPR031167 OBG-type guanine nucleotide-binding (G) domain AFA_02830 IPR012675 Beta-grasp domain superfamily AFA_02830 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AFA_02830 IPR013029 YchF, C-terminal domain AFA_02830 IPR004095 TGS AFA_02835 IPR005534 Curli production assembly/transport component CsgG AFA_02845 IPR008517 Protein of unknown function DUF799 AFA_02855 IPR000620 EamA domain AFA_02860 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02860 IPR003593 AAA+ ATPase domain AFA_02860 IPR032524 ABC transporter Uup, C-terminal AFA_02860 IPR032781 ABC-transporter extension domain AFA_02860 IPR003439 ABC transporter-like AFA_02860 IPR017871 ABC transporter, conserved site AFA_02860 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AFA_02870 IPR001765 Carbonic anhydrase AFA_02870 IPR036874 Carbonic anhydrase superfamily AFA_02870 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AFA_02875 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain AFA_02875 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02875 IPR036390 Winged helix DNA-binding domain superfamily AFA_02875 IPR005119 LysR, substrate-binding AFA_02875 IPR000847 Transcription regulator HTH, LysR AFA_02885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02885 IPR005895 ABC transporter, haem export, CcmA AFA_02885 IPR003439 ABC transporter-like AFA_02885 IPR017871 ABC transporter, conserved site AFA_02885 IPR003593 AAA+ ATPase domain AFA_02890 IPR003544 Cytochrome c-type biogenesis protein CcmB AFA_02890 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AFA_02895 IPR003557 Cytochrome c-type biogenesis protein CcmC AFA_02895 IPR002541 Cytochrome c assembly protein AFA_02905 IPR004329 CcmE/CycJ protein AFA_02905 IPR036127 CcmE-like superfamily AFA_02910 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AFA_02910 IPR002541 Cytochrome c assembly protein AFA_02910 IPR003567 Cytochrome c-type biogenesis protein AFA_02910 IPR003568 Cytochrome c-type biogenesis protein CcmF AFA_02915 IPR036249 Thioredoxin-like superfamily AFA_02915 IPR013740 Redoxin AFA_02915 IPR017937 Thioredoxin, conserved site AFA_02915 IPR013766 Thioredoxin domain AFA_02915 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AFA_02920 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AFA_02920 IPR005616 CcmH/CycL/Ccl2/NrfF family AFA_02925 IPR011990 Tetratricopeptide-like helical domain superfamily AFA_02925 IPR019734 Tetratricopeptide repeat AFA_02925 IPR013026 Tetratricopeptide repeat-containing domain AFA_02925 IPR017560 Cytochrome c-type biogenesis protein CcmI AFA_02930 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AFA_02935 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_02935 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_02935 IPR036291 NAD(P)-binding domain superfamily AFA_02940 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AFA_02940 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AFA_02940 IPR016221 Bifunctional regulatory protein Ada AFA_02940 IPR004026 Ada DNA repair, metal-binding AFA_02940 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AFA_02940 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AFA_02940 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AFA_02940 IPR018062 HTH domain AraC-type, conserved site AFA_02940 IPR035451 Ada-like domain superfamily AFA_02940 IPR009057 Homeobox-like domain superfamily AFA_02940 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02940 IPR018060 DNA binding HTH domain, AraC-type AFA_02960 IPR001851 ABC transporter, permease AFA_02965 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AFA_02965 IPR001851 ABC transporter, permease AFA_02970 IPR003439 ABC transporter-like AFA_02970 IPR003593 AAA+ ATPase domain AFA_02970 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_02970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02970 IPR017871 ABC transporter, conserved site AFA_02975 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_02975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_02975 IPR017871 ABC transporter, conserved site AFA_02975 IPR003439 ABC transporter-like AFA_02975 IPR003593 AAA+ ATPase domain AFA_02980 IPR036909 Cytochrome c-like domain superfamily AFA_02980 IPR004852 Di-haem cytochrome c peroxidase AFA_02980 IPR009056 Cytochrome c-like domain AFA_02980 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase AFA_02985 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AFA_02985 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFA_02985 IPR002912 ACT domain AFA_02985 IPR036291 NAD(P)-binding domain superfamily AFA_02985 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AFA_02985 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AFA_02990 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_02990 IPR036390 Winged helix DNA-binding domain superfamily AFA_02990 IPR000944 Transcription regulator Rrf2-type AFA_02990 IPR030489 Transcription regulator Rrf2-type, conserved site AFA_02995 IPR009050 Globin-like superfamily AFA_02995 IPR012292 Globin/Protoglobin AFA_02995 IPR001486 Truncated hemoglobin AFA_03000 IPR001173 Glycosyltransferase 2-like AFA_03000 IPR029044 Nucleotide-diphospho-sugar transferases AFA_03025 IPR006016 UspA AFA_03025 IPR006015 Universal stress protein A family AFA_03035 IPR016193 Cytidine deaminase-like AFA_03035 IPR003786 Sulfur carrier protein FdhD AFA_03040 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AFA_03040 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_03040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_03040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_03040 IPR006656 Molybdopterin oxidoreductase AFA_03040 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_03040 IPR009010 Aspartate decarboxylase-like domain superfamily AFA_03040 IPR006478 Formate dehydrogenase, alpha subunit AFA_03040 IPR006657 Molybdopterin dinucleotide-binding domain AFA_03040 IPR041924 Formate dehydrogenase H, N-terminal AFA_03040 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AFA_03045 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AFA_03045 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AFA_03045 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AFA_03045 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AFA_03045 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AFA_03045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_03045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_03060 IPR013483 Molybdenum cofactor biosynthesis protein A AFA_03060 IPR010505 Molybdenum cofactor synthesis C-terminal AFA_03060 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AFA_03060 IPR006638 Elp3/MiaB/NifB AFA_03060 IPR007197 Radical SAM AFA_03060 IPR013785 Aldolase-type TIM barrel AFA_03065 IPR013482 Molybdenum cofactor guanylyltransferase AFA_03065 IPR025877 MobA-like NTP transferase AFA_03065 IPR029044 Nucleotide-diphospho-sugar transferases AFA_03070 IPR001453 MoaB/Mog domain AFA_03070 IPR008284 Molybdenum cofactor biosynthesis, conserved site AFA_03070 IPR036135 MoeA, N-terminal and linker domain superfamily AFA_03070 IPR005110 MoeA, N-terminal and linker domain AFA_03070 IPR036688 MoeA, C-terminal, domain IV superfamily AFA_03070 IPR005111 MoeA, C-terminal, domain IV AFA_03070 IPR038987 Molybdopterin biosynthesis protein MoeA-like AFA_03070 IPR036425 MoaB/Mog-like domain superfamily AFA_03075 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria AFA_03075 IPR001453 MoaB/Mog domain AFA_03075 IPR036425 MoaB/Mog-like domain superfamily AFA_03075 IPR012245 Molybdenum cofactor biosynthesis protein MoaB AFA_03075 IPR008284 Molybdenum cofactor biosynthesis, conserved site AFA_03080 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AFA_03080 IPR003448 Molybdopterin biosynthesis MoaE AFA_03090 IPR023045 Molybdenum cofactor biosynthesis C AFA_03090 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AFA_03090 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AFA_03095 IPR000792 Transcription regulator LuxR, C-terminal AFA_03095 IPR001789 Signal transduction response regulator, receiver domain AFA_03095 IPR011006 CheY-like superfamily AFA_03095 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_03100 IPR000014 PAS domain AFA_03100 IPR000700 PAS-associated, C-terminal AFA_03100 IPR035965 PAS domain superfamily AFA_03100 IPR013767 PAS fold AFA_03100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_03100 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_03100 IPR005467 Histidine kinase domain AFA_03100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_03100 IPR003594 Histidine kinase/HSP90-like ATPase AFA_03100 IPR001610 PAC motif AFA_03100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_03105 IPR004682 TRAP transporter solute receptor, DctP family AFA_03105 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_03105 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_03110 IPR007387 TRAP transporter, small membrane protein DctQ AFA_03115 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_03115 IPR004681 TRAP transporter large membrane protein DctM AFA_03120 IPR013740 Redoxin AFA_03120 IPR037944 Peroxiredoxin-5-like AFA_03120 IPR013766 Thioredoxin domain AFA_03120 IPR036249 Thioredoxin-like superfamily AFA_03135 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AFA_03135 IPR024177 Biotin synthase AFA_03135 IPR006638 Elp3/MiaB/NifB AFA_03135 IPR007197 Radical SAM AFA_03135 IPR010722 Biotin and thiamin synthesis-associated domain AFA_03135 IPR013785 Aldolase-type TIM barrel AFA_03140 IPR029069 HotDog domain superfamily AFA_03140 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site AFA_03150 IPR001036 Acriflavin resistance protein AFA_03150 IPR022831 Multidrug resistance protein MdtB AFA_03150 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AFA_03155 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AFA_03155 IPR006143 RND efflux pump, membrane fusion protein AFA_03195 IPR005330 MHYT domain AFA_03195 IPR035919 EAL domain superfamily AFA_03195 IPR001633 EAL domain AFA_03195 IPR029787 Nucleotide cyclase AFA_03195 IPR000160 GGDEF domain AFA_03200 IPR004563 Apolipoprotein N-acyltransferase AFA_03200 IPR036526 Carbon-nitrogen hydrolase superfamily AFA_03200 IPR003010 Carbon-nitrogen hydrolase AFA_03205 IPR000644 CBS domain AFA_03205 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_03205 IPR036318 FAD-binding, type PCMH-like superfamily AFA_03205 IPR005170 Transporter-associated domain AFA_03210 IPR023091 Metalloprotease catalytic domain superfamily, predicted AFA_03210 IPR002036 Endoribonuclease YbeY AFA_03210 IPR020549 Endoribonuclease YbeY, conserved site AFA_03215 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03215 IPR003714 PhoH-like protein AFA_03220 IPR013848 Methylthiotransferase, N-terminal AFA_03220 IPR038135 Methylthiotransferase, N-terminal domain superfamily AFA_03220 IPR005839 Methylthiotransferase AFA_03220 IPR020612 Methylthiotransferase, conserved site AFA_03220 IPR002792 TRAM domain AFA_03220 IPR023404 Radical SAM, alpha/beta horseshoe AFA_03220 IPR007197 Radical SAM AFA_03220 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AFA_03220 IPR006638 Elp3/MiaB/NifB AFA_03230 IPR000994 Peptidase M24 AFA_03230 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AFA_03230 IPR036005 Creatinase/aminopeptidase-like AFA_03230 IPR001714 Peptidase M24, methionine aminopeptidase AFA_03235 IPR005665 Protein-export membrane protein SecF, bacterial AFA_03235 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AFA_03235 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AFA_03235 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AFA_03240 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AFA_03240 IPR005791 Protein translocase subunit SecD AFA_03240 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AFA_03240 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AFA_03240 IPR027398 SecD export protein N-terminal TM domain AFA_03245 IPR003849 Preprotein translocase YajC AFA_03250 IPR036511 Queuine tRNA-ribosyltransferase-like AFA_03250 IPR002616 tRNA-guanine(15) transglycosylase-like AFA_03250 IPR004803 tRNA-guanine transglycosylase AFA_03255 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AFA_03255 IPR042119 QueA, domain 2 AFA_03255 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily AFA_03255 IPR042118 QueA, domain 1 AFA_03260 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C AFA_03260 IPR012338 Beta-lactamase/transpeptidase-like AFA_03265 IPR029057 Phosphoribosyltransferase-like AFA_03265 IPR000836 Phosphoribosyltransferase domain AFA_03265 IPR034332 Uracil phosphoribosyltransferase, bacterial-type AFA_03265 IPR005765 Uracil phosphoribosyl transferase AFA_03275 IPR010279 Inner membrane protein YqjD/ElaB AFA_03290 IPR005119 LysR, substrate-binding AFA_03290 IPR000847 Transcription regulator HTH, LysR AFA_03290 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_03290 IPR036390 Winged helix DNA-binding domain superfamily AFA_03305 IPR036291 NAD(P)-binding domain superfamily AFA_03305 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase AFA_03320 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AFA_03320 IPR023631 Amidase signature domain AFA_03320 IPR020556 Amidase, conserved site AFA_03320 IPR000120 Amidase AFA_03320 IPR036928 Amidase signature (AS) superfamily AFA_03330 IPR015041 Osmosensory transporter coiled coil AFA_03330 IPR004736 MFS transporter, metabolite:H symporter AFA_03330 IPR036259 MFS transporter superfamily AFA_03330 IPR005829 Sugar transporter, conserved site AFA_03330 IPR005828 Major facilitator, sugar transporter-like AFA_03330 IPR020846 Major facilitator superfamily domain AFA_03330 IPR036292 Proline/betaine transporter ProP, C-terminal AFA_03335 IPR005119 LysR, substrate-binding AFA_03335 IPR000847 Transcription regulator HTH, LysR AFA_03335 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_03335 IPR036390 Winged helix DNA-binding domain superfamily AFA_03340 IPR004361 Glyoxalase I AFA_03340 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AFA_03340 IPR037523 Vicinal oxygen chelate (VOC) domain AFA_03340 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AFA_03340 IPR018146 Glyoxalase I, conserved site AFA_03345 IPR023677 UbiD decarboxylyase, bacteria AFA_03345 IPR002830 UbiD decarboxylyase family AFA_03350 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A AFA_03350 IPR000189 Prokaryotic transglycosylase, active site AFA_03350 IPR008258 Transglycosylase SLT domain 1 AFA_03350 IPR023346 Lysozyme-like domain superfamily AFA_03355 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AFA_03355 IPR015424 Pyridoxal phosphate-dependent transferase AFA_03355 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_03355 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_03355 IPR004839 Aminotransferase, class I/classII AFA_03365 IPR002505 Phosphate acetyl/butaryl transferase AFA_03365 IPR042113 Phosphate acetyltransferase, domain 1 AFA_03365 IPR015884 Malic enzyme, conserved site AFA_03365 IPR012301 Malic enzyme, N-terminal domain AFA_03365 IPR037062 Malic enzyme, N-terminal domain superfamily AFA_03365 IPR012302 Malic enzyme, NAD-binding AFA_03365 IPR042112 Phosphate acetyltransferase, domain 2 AFA_03365 IPR036291 NAD(P)-binding domain superfamily AFA_03365 IPR012188 NAD(P)-dependent malic enzyme AFA_03375 IPR035905 Barstar-like superfamily AFA_03375 IPR000468 Barstar (barnase inhibitor) AFA_03380 IPR015947 PUA-like superfamily AFA_03380 IPR029028 Alpha/beta knot methyltransferases AFA_03380 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AFA_03380 IPR006700 Ribosomal RNA small subunit methyltransferase E AFA_03385 IPR005474 Transketolase, N-terminal AFA_03385 IPR033247 Transketolase family AFA_03385 IPR033248 Transketolase, C-terminal domain AFA_03385 IPR020826 Transketolase binding site AFA_03385 IPR005478 Transketolase, bacterial-like AFA_03385 IPR005475 Transketolase-like, pyrimidine-binding domain AFA_03385 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AFA_03385 IPR029061 Thiamin diphosphate-binding fold AFA_03390 IPR036291 NAD(P)-binding domain superfamily AFA_03390 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AFA_03390 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AFA_03390 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AFA_03390 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AFA_03390 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AFA_03395 IPR036043 Phosphoglycerate kinase superfamily AFA_03395 IPR015824 Phosphoglycerate kinase, N-terminal AFA_03395 IPR015911 Phosphoglycerate kinase, conserved site AFA_03395 IPR001576 Phosphoglycerate kinase AFA_03410 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_03410 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_03410 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_03410 IPR016161 Aldehyde/histidinol dehydrogenase AFA_03410 IPR015590 Aldehyde dehydrogenase domain AFA_03415 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_03415 IPR036291 NAD(P)-binding domain superfamily AFA_03415 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_03420 IPR001453 MoaB/Mog domain AFA_03420 IPR008284 Molybdenum cofactor biosynthesis, conserved site AFA_03420 IPR036425 MoaB/Mog-like domain superfamily AFA_03425 IPR013785 Aldolase-type TIM barrel AFA_03425 IPR000771 Fructose-bisphosphate aldolase, class-II AFA_03425 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype AFA_03430 IPR028923 SAICAR synthetase/ADE2, N-terminal AFA_03430 IPR018236 SAICAR synthetase, conserved site AFA_03430 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AFA_03435 IPR035893 PurE domain superfamily AFA_03435 IPR000031 PurE domain AFA_03435 IPR033747 Class I PurE AFA_03435 IPR024694 PurE, prokaryotic type AFA_03440 IPR011761 ATP-grasp fold AFA_03440 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AFA_03440 IPR011054 Rudiment single hybrid motif AFA_03440 IPR013815 ATP-grasp fold, subdomain 1 AFA_03440 IPR016185 Pre-ATP-grasp domain superfamily AFA_03440 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AFA_03440 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain AFA_03445 IPR005145 Putative GTP-binding controlling metal-binding domain AFA_03445 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AFA_03445 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily AFA_03445 IPR006070 YrdC-like domain AFA_03445 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AFA_03450 IPR029058 Alpha/Beta hydrolase fold AFA_03450 IPR000073 Alpha/beta hydrolase fold-1 AFA_03450 IPR019913 Pyrimidine utilisation protein RutD AFA_03460 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_03460 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_03460 IPR016161 Aldehyde/histidinol dehydrogenase AFA_03460 IPR011966 Phenylacetic acid degradation protein PaaN AFA_03460 IPR015590 Aldehyde dehydrogenase domain AFA_03460 IPR029069 HotDog domain superfamily AFA_03460 IPR002539 MaoC-like dehydratase domain AFA_03465 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_03465 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_03465 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_03465 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_03465 IPR006089 Acyl-CoA dehydrogenase, conserved site AFA_03465 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_03465 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_03470 IPR036390 Winged helix DNA-binding domain superfamily AFA_03470 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_03470 IPR005119 LysR, substrate-binding AFA_03470 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 AFA_03470 IPR000847 Transcription regulator HTH, LysR AFA_03475 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_03475 IPR000101 Gamma-glutamyltranspeptidase AFA_03480 IPR036477 Formyl transferase, N-terminal domain superfamily AFA_03480 IPR002912 ACT domain AFA_03480 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AFA_03480 IPR002376 Formyl transferase, N-terminal AFA_03480 IPR004810 Formyltetrahydrofolate deformylase AFA_03485 IPR006076 FAD dependent oxidoreductase AFA_03485 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_03485 IPR030862 L-2-hydroxyglutarate dehydrogenase AFA_03490 IPR002563 Flavin reductase like domain AFA_03490 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_03490 IPR036390 Winged helix DNA-binding domain superfamily AFA_03490 IPR012349 FMN-binding split barrel AFA_03495 IPR012349 FMN-binding split barrel AFA_03495 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AFA_03495 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AFA_03495 IPR000659 Pyridoxamine 5'-phosphate oxidase AFA_03495 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AFA_03505 IPR035985 Ubiquitin-activating enzyme AFA_03505 IPR000594 THIF-type NAD/FAD binding fold AFA_03515 IPR006805 Anthranilate synthase component I, N-terminal AFA_03515 IPR019999 Anthranilate synthase component I-like AFA_03515 IPR005801 ADC synthase AFA_03515 IPR005802 Aminodeoxychorismate synthase, component I AFA_03515 IPR015890 Chorismate-utilising enzyme, C-terminal AFA_03520 IPR004602 UvrABC system subunit A AFA_03520 IPR003439 ABC transporter-like AFA_03520 IPR041102 UvrA, interaction domain AFA_03520 IPR041552 UvrA DNA-binding domain AFA_03520 IPR017871 ABC transporter, conserved site AFA_03520 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03530 IPR001173 Glycosyltransferase 2-like AFA_03530 IPR029044 Nucleotide-diphospho-sugar transferases AFA_03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03540 IPR003593 AAA+ ATPase domain AFA_03540 IPR032781 ABC-transporter extension domain AFA_03540 IPR017871 ABC transporter, conserved site AFA_03540 IPR022374 Energy-dependent translational throttle protein EttA AFA_03540 IPR003439 ABC transporter-like AFA_03560 IPR036707 Cell division topological specificity factor MinE superfamily AFA_03560 IPR005527 Cell division topological specificity factor MinE AFA_03565 IPR025501 ATP binding protein MinD AFA_03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03565 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AFA_03565 IPR010223 ATP binding protein MinD, bacterial-type AFA_03570 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal AFA_03570 IPR013033 Septum formation inhibitor MinC AFA_03570 IPR007874 Septum formation inhibitor MinC, N-terminal AFA_03570 IPR005526 Septum formation inhibitor MinC, C-terminal AFA_03570 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily AFA_03570 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AFA_03575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_03575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_03575 IPR004514 Glutamine-tRNA synthetase AFA_03575 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AFA_03575 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily AFA_03575 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AFA_03575 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AFA_03575 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AFA_03575 IPR022861 Glutamine-tRNA ligase, bacterial AFA_03575 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AFA_03585 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AFA_03590 IPR001807 Chloride channel, voltage gated AFA_03590 IPR023790 Chloride channel, voltage-gated, ClcB AFA_03590 IPR014743 Chloride channel, core AFA_03600 IPR002121 HRDC domain AFA_03600 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_03600 IPR018982 RQC domain AFA_03600 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AFA_03600 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03600 IPR010997 HRDC-like superfamily AFA_03600 IPR004589 DNA helicase, ATP-dependent, RecQ type AFA_03600 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_03600 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AFA_03600 IPR011545 DEAD/DEAH box helicase domain AFA_03600 IPR001650 Helicase, C-terminal AFA_03605 IPR013346 Ribonucleotide reductase, class I , alpha subunit AFA_03605 IPR005144 ATP-cone domain AFA_03605 IPR000788 Ribonucleotide reductase large subunit, C-terminal AFA_03605 IPR013509 Ribonucleotide reductase large subunit, N-terminal AFA_03605 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AFA_03605 IPR039718 Ribonucleoside-diphosphate reductase large subunit AFA_03610 IPR000358 Ribonucleotide reductase small subunit family AFA_03610 IPR030475 Ribonucleotide reductase small subunit, acitve site AFA_03610 IPR033909 Ribonucleotide reductase small subunit AFA_03610 IPR012348 Ribonucleotide reductase-like AFA_03610 IPR009078 Ferritin-like superfamily AFA_03615 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_03615 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_03615 IPR012675 Beta-grasp domain superfamily AFA_03615 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_03630 IPR035644 MraZ, C-terminal AFA_03630 IPR020603 MraZ domain AFA_03630 IPR035642 MraZ, N-terminal AFA_03630 IPR038619 MraZ superfamily AFA_03630 IPR007159 SpoVT-AbrB domain AFA_03630 IPR037914 SpoVT-AbrB domain superfamily AFA_03630 IPR003444 Transcriptional regulator MraZ AFA_03635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_03635 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily AFA_03635 IPR002903 Ribosomal RNA small subunit methyltransferase H AFA_03640 IPR011922 Cell division protein FtsL AFA_03645 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AFA_03645 IPR037532 Peptidoglycan D,D-transpeptidase FtsI AFA_03645 IPR012338 Beta-lactamase/transpeptidase-like AFA_03645 IPR005311 Penicillin-binding protein, dimerisation domain AFA_03645 IPR001460 Penicillin-binding protein, transpeptidase AFA_03650 IPR036615 Mur ligase, C-terminal domain superfamily AFA_03650 IPR035911 MurE/MurF, N-terminal AFA_03650 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AFA_03650 IPR004101 Mur ligase, C-terminal AFA_03650 IPR036565 Mur-like, catalytic domain superfamily AFA_03650 IPR000713 Mur ligase, N-terminal catalytic domain AFA_03650 IPR013221 Mur ligase, central AFA_03655 IPR000715 Glycosyl transferase, family 4 AFA_03655 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AFA_03655 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AFA_03660 IPR036615 Mur ligase, C-terminal domain superfamily AFA_03660 IPR013221 Mur ligase, central AFA_03660 IPR004101 Mur ligase, C-terminal AFA_03660 IPR036565 Mur-like, catalytic domain superfamily AFA_03660 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AFA_03660 IPR018109 Folylpolyglutamate synthetase, conserved site AFA_03665 IPR013437 Probable peptidoglycan glycosyltransferase FtsW AFA_03665 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AFA_03670 IPR004276 Glycosyltransferase family 28, N-terminal domain AFA_03670 IPR007235 Glycosyl transferase, family 28, C-terminal AFA_03670 IPR006009 N-acetylglucosaminyltransferase, MurG AFA_03675 IPR036565 Mur-like, catalytic domain superfamily AFA_03675 IPR004101 Mur ligase, C-terminal AFA_03675 IPR036615 Mur ligase, C-terminal domain superfamily AFA_03675 IPR000713 Mur ligase, N-terminal catalytic domain AFA_03675 IPR013221 Mur ligase, central AFA_03675 IPR005758 UDP-N-acetylmuramate--L-alanine ligase AFA_03680 IPR011095 D-alanine--D-alanine ligase, C-terminal AFA_03680 IPR016185 Pre-ATP-grasp domain superfamily AFA_03680 IPR005905 D-alanine--D-alanine ligase AFA_03680 IPR013815 ATP-grasp fold, subdomain 1 AFA_03680 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AFA_03680 IPR011761 ATP-grasp fold AFA_03680 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AFA_03685 IPR034746 POTRA domain AFA_03685 IPR005548 Cell division protein FtsQ/DivIB AFA_03685 IPR013685 POTRA domain, FtsQ-type AFA_03685 IPR026579 Cell division protein FtsQ AFA_03690 IPR003494 SHS2 domain inserted in FtsA AFA_03690 IPR020823 Cell division protein FtsA AFA_03695 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AFA_03695 IPR024757 Cell division protein FtsZ, C-terminal AFA_03695 IPR020805 Cell division protein FtsZ, conserved site AFA_03695 IPR000158 Cell division protein FtsZ AFA_03695 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AFA_03695 IPR003008 Tubulin/FtsZ, GTPase domain AFA_03695 IPR008280 Tubulin/FtsZ, C-terminal AFA_03700 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal AFA_03700 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_03700 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase AFA_03700 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal AFA_03710 IPR016047 Peptidase M23 AFA_03710 IPR008258 Transglycosylase SLT domain 1 AFA_03710 IPR000189 Prokaryotic transglycosylase, active site AFA_03710 IPR010090 Phage tail tape measure protein AFA_03710 IPR023346 Lysozyme-like domain superfamily AFA_03710 IPR011055 Duplicated hybrid motif AFA_03715 IPR011116 SecA Wing/Scaffold AFA_03715 IPR036266 SecA, Wing/Scaffold superfamily AFA_03715 IPR036670 SecA, preprotein cross-linking domain superfamily AFA_03715 IPR011130 SecA, preprotein cross-linking domain AFA_03715 IPR004027 SEC-C motif AFA_03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03715 IPR014018 SecA motor DEAD AFA_03715 IPR011115 SecA DEAD-like, N-terminal AFA_03715 IPR000185 Protein translocase subunit SecA AFA_03715 IPR020937 SecA conserved site AFA_03725 IPR006667 SLC41 divalent cation transporters, integral membrane domain AFA_03725 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AFA_03725 IPR006669 Magnesium transporter MgtE AFA_03725 IPR000644 CBS domain AFA_03725 IPR006668 Magnesium transporter, MgtE intracellular domain AFA_03725 IPR038076 MgtE, N-terminal domain superfamily AFA_03725 IPR038048 Magnesium transporter MgtE, transmembrane domain AFA_03730 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase AFA_03730 IPR029069 HotDog domain superfamily AFA_03730 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain AFA_03730 IPR006683 Thioesterase domain AFA_03735 IPR002933 Peptidase M20 AFA_03735 IPR036264 Bacterial exopeptidase dimerisation domain AFA_03735 IPR017439 Amidohydrolase AFA_03735 IPR011650 Peptidase M20, dimerisation domain AFA_03740 IPR020845 AMP-binding, conserved site AFA_03740 IPR025110 AMP-binding enzyme, C-terminal domain AFA_03740 IPR042099 AMP-dependent synthetase-like superfamily AFA_03740 IPR000873 AMP-dependent synthetase/ligase AFA_03745 IPR022337 Inositol monophosphatase, SuhB AFA_03745 IPR020583 Inositol monophosphatase, metal-binding site AFA_03745 IPR033942 Inositol monophosphatase AFA_03745 IPR020550 Inositol monophosphatase, conserved site AFA_03745 IPR000760 Inositol monophosphatase-like AFA_03750 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal AFA_03750 IPR006076 FAD dependent oxidoreductase AFA_03750 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_03750 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC AFA_03750 IPR008471 MnmC-like methyltransferase AFA_03765 IPR003593 AAA+ ATPase domain AFA_03765 IPR026253 Methionine import ATP-binding protein MetN AFA_03765 IPR003439 ABC transporter-like AFA_03765 IPR017871 ABC transporter, conserved site AFA_03765 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal AFA_03765 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain AFA_03765 IPR018449 NIL domain AFA_03765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03770 IPR035906 MetI-like superfamily AFA_03770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_03775 IPR004872 Lipoprotein NlpA family AFA_03780 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_03780 IPR018313 Solute-binding protein family 3, conserved site AFA_03780 IPR001320 Ionotropic glutamate receptor AFA_03785 IPR035906 MetI-like superfamily AFA_03785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_03785 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03790 IPR017871 ABC transporter, conserved site AFA_03790 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AFA_03790 IPR003439 ABC transporter-like AFA_03790 IPR003593 AAA+ ATPase domain AFA_03800 IPR029044 Nucleotide-diphospho-sugar transferases AFA_03800 IPR005835 Nucleotidyl transferase domain AFA_03805 IPR011009 Protein kinase-like domain superfamily AFA_03805 IPR002575 Aminoglycoside phosphotransferase AFA_03810 IPR007543 LptD, C-terminal AFA_03810 IPR020889 LPS-assembly protein LptD AFA_03815 IPR027304 Trigger factor/SurA domain superfamily AFA_03815 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AFA_03815 IPR023034 Peptidyl-prolyl isomerase SurA AFA_03815 IPR015391 SurA N-terminal AFA_03820 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AFA_03820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_03820 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AFA_03820 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AFA_03820 IPR011530 Ribosomal RNA adenine dimethylase AFA_03820 IPR023165 rRNA adenine dimethylase-like AFA_03825 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AFA_03830 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AFA_03830 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AFA_03830 IPR004361 Glyoxalase I AFA_03830 IPR018146 Glyoxalase I, conserved site AFA_03830 IPR037523 Vicinal oxygen chelate (VOC) domain AFA_03840 IPR002123 Phospholipid/glycerol acyltransferase AFA_03840 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AFA_03845 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AFA_03845 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase AFA_03845 IPR006543 Histidinol-phosphate phosphatase AFA_03845 IPR023214 HAD superfamily AFA_03845 IPR036412 HAD-like superfamily AFA_03850 IPR006194 Glycine-tRNA synthetase, heterodimeric AFA_03850 IPR015944 Glycine-tRNA ligase, beta subunit AFA_03850 IPR008909 DALR anticodon binding AFA_03855 IPR006194 Glycine-tRNA synthetase, heterodimeric AFA_03855 IPR002310 Glycine-tRNA ligase, alpha subunit AFA_03865 IPR014748 Enoyl-CoA hydratase, C-terminal AFA_03865 IPR001753 Enoyl-CoA hydratase/isomerase AFA_03865 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_03865 IPR029045 ClpP/crotonase-like domain superfamily AFA_03865 IPR022852 Carnitinyl-CoA dehydratase AFA_03870 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AFA_03870 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AFA_03870 IPR020557 Fumarate lyase, conserved site AFA_03870 IPR011167 Iron-dependent fumarate hydratase AFA_03870 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily AFA_03875 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AFA_03875 IPR001647 DNA-binding HTH domain, TetR-type AFA_03875 IPR009057 Homeobox-like domain superfamily AFA_03885 IPR023495 Sugar efflux transporter, putative AFA_03885 IPR011701 Major facilitator superfamily AFA_03885 IPR020846 Major facilitator superfamily domain AFA_03885 IPR036259 MFS transporter superfamily AFA_03895 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AFA_03895 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AFA_03900 IPR010206 Poly(A) polymerase I AFA_03900 IPR025866 Polymerase A arginine-rich C-terminal domain AFA_03900 IPR002646 Poly A polymerase, head domain AFA_03900 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AFA_03910 IPR020591 Chromosomal replication control, initiator DnaA-like AFA_03910 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AFA_03910 IPR003593 AAA+ ATPase domain AFA_03910 IPR001957 Chromosomal replication control, initiator DnaA AFA_03910 IPR010921 Trp repressor/replication initiator AFA_03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03910 IPR013317 Chromosomal replication initiator protein DnaA AFA_03910 IPR013159 Chromosomal replication initiator, DnaA C-terminal AFA_03915 IPR010918 PurM-like, C-terminal domain AFA_03915 IPR036676 PurM-like, C-terminal domain superfamily AFA_03915 IPR016188 PurM-like, N-terminal domain AFA_03915 IPR036921 PurM-like, N-terminal domain superfamily AFA_03915 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AFA_03920 IPR038271 Purine-cytosine permease superfamily AFA_03920 IPR012681 Nucleobase cation symporter-1, NCS1 AFA_03920 IPR001248 Purine-cytosine permease AFA_03925 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03925 IPR039657 Dimethylallyltransferase AFA_03925 IPR018022 IPP transferase AFA_03930 IPR020667 DNA mismatch repair protein, MutL AFA_03930 IPR002099 DNA mismatch repair protein family, N-terminal AFA_03930 IPR013507 DNA mismatch repair protein, S5 domain 2-like AFA_03930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_03930 IPR042120 MutL, C-terminal domain, dimerisation subdomain AFA_03930 IPR014790 MutL, C-terminal, dimerisation AFA_03930 IPR042121 MutL, C-terminal domain, regulatory subdomain AFA_03930 IPR037198 MutL, C-terminal domain superfamily AFA_03930 IPR014762 DNA mismatch repair, conserved site AFA_03930 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_03930 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_03930 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms AFA_03935 IPR032816 SNARE associated Golgi protein AFA_03935 IPR032818 DedA family AFA_03940 IPR003374 ApbE-like superfamily AFA_03940 IPR024932 Flavin transferase ApbE AFA_03940 IPR042159 Flavin-trafficking protein ApbE AFA_03945 IPR008254 Flavodoxin/nitric oxide synthase AFA_03945 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AFA_03945 IPR029039 Flavoprotein-like superfamily AFA_03945 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_03945 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AFA_03945 IPR001094 Flavodoxin-like AFA_03945 IPR017938 Riboflavin synthase-like beta-barrel AFA_03945 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_03945 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_03945 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_03960 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain AFA_03960 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_03960 IPR021731 AMIN domain AFA_03965 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AFA_03965 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_03975 IPR042100 Bordetella uptake gene, domain 1 AFA_03975 IPR005064 Bordetella uptake gene AFA_03980 IPR012302 Malic enzyme, NAD-binding AFA_03980 IPR002505 Phosphate acetyl/butaryl transferase AFA_03980 IPR042112 Phosphate acetyltransferase, domain 2 AFA_03980 IPR042113 Phosphate acetyltransferase, domain 1 AFA_03980 IPR012301 Malic enzyme, N-terminal domain AFA_03980 IPR015884 Malic enzyme, conserved site AFA_03980 IPR037062 Malic enzyme, N-terminal domain superfamily AFA_03980 IPR012188 NAD(P)-dependent malic enzyme AFA_03980 IPR036291 NAD(P)-binding domain superfamily AFA_03985 IPR036390 Winged helix DNA-binding domain superfamily AFA_03985 IPR005119 LysR, substrate-binding AFA_03985 IPR012787 Pca transcription factor PcaQ AFA_03985 IPR000847 Transcription regulator HTH, LysR AFA_03985 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_03990 IPR016161 Aldehyde/histidinol dehydrogenase AFA_03990 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_03990 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_03990 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_03990 IPR015590 Aldehyde dehydrogenase domain AFA_03990 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_03995 IPR020624 Schiff base-forming aldolase, conserved site AFA_03995 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AFA_03995 IPR002220 DapA-like AFA_03995 IPR013785 Aldolase-type TIM barrel AFA_03995 IPR020625 Schiff base-forming aldolase, active site AFA_04005 IPR004681 TRAP transporter large membrane protein DctM AFA_04005 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_04030 IPR002577 Helix-turn-helix, HxlR type AFA_04030 IPR036390 Winged helix DNA-binding domain superfamily AFA_04030 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04035 IPR036291 NAD(P)-binding domain superfamily AFA_04035 IPR016040 NAD(P)-binding domain AFA_04045 IPR011701 Major facilitator superfamily AFA_04045 IPR020846 Major facilitator superfamily domain AFA_04045 IPR036259 MFS transporter superfamily AFA_04045 IPR004737 Nitrate transporter AFA_04050 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AFA_04050 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AFA_04050 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AFA_04055 IPR013762 Integrase-like, catalytic domain superfamily AFA_04055 IPR010998 Integrase/recombinase, N-terminal AFA_04055 IPR004107 Integrase, SAM-like, N-terminal AFA_04055 IPR023009 Tyrosine recombinase XerC/XerD AFA_04055 IPR011010 DNA breaking-rejoining enzyme, catalytic core AFA_04055 IPR002104 Integrase, catalytic domain AFA_04055 IPR011932 Tyrosine recombinase XerD AFA_04060 IPR005950 Molybdate ABC transporter, substrate-binding protein AFA_04065 IPR011867 Molybdate ABC transporter, permease protein AFA_04065 IPR035906 MetI-like superfamily AFA_04065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_04070 IPR005116 Transport-associated OB, type 1 AFA_04070 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal AFA_04070 IPR017871 ABC transporter, conserved site AFA_04070 IPR008995 Molybdate/tungstate binding, C-terminal AFA_04070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04070 IPR005666 Sulphate transport system permease protein 1 AFA_04070 IPR003593 AAA+ ATPase domain AFA_04070 IPR003439 ABC transporter-like AFA_04075 IPR000847 Transcription regulator HTH, LysR AFA_04075 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04075 IPR036390 Winged helix DNA-binding domain superfamily AFA_04075 IPR005116 Transport-associated OB, type 1 AFA_04075 IPR004606 Molybdenum-pterin binding AFA_04075 IPR003725 Molybdenum-binding protein ModE, N-terminal AFA_04075 IPR016462 Molybdate-dependent transcriptional regulator ModE AFA_04075 IPR008995 Molybdate/tungstate binding, C-terminal AFA_04095 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily AFA_04095 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04095 IPR021029 DNA polymerase III, tau subunit, domain V AFA_04095 IPR012763 DNA polymerase III, subunit gamma/ tau AFA_04095 IPR022754 DNA polymerase III, gamma subunit, domain III AFA_04095 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV AFA_04095 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AFA_04095 IPR001270 ClpA/B family AFA_04095 IPR003593 AAA+ ATPase domain AFA_04100 IPR004401 Nucleoid-associated protein YbaB/EbfC family AFA_04100 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AFA_04105 IPR000093 DNA recombination protein RecR AFA_04105 IPR034137 RecR, TOPRIM domain AFA_04105 IPR006171 TOPRIM domain AFA_04105 IPR023628 Recombination protein RecR, C4-type zinc finger AFA_04105 IPR023627 Recombination protein RecR AFA_04110 IPR015168 SsuA/THI5-like AFA_04115 IPR003593 AAA+ ATPase domain AFA_04115 IPR003439 ABC transporter-like AFA_04115 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_04120 IPR035906 MetI-like superfamily AFA_04125 IPR018225 Transaldolase, active site AFA_04125 IPR004730 Transaldolase type 1 AFA_04125 IPR013785 Aldolase-type TIM barrel AFA_04125 IPR001585 Transaldolase/Fructose-6-phosphate aldolase AFA_04130 IPR017926 Glutamine amidotransferase AFA_04130 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AFA_04130 IPR029062 Class I glutamine amidotransferase-like AFA_04130 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AFA_04130 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AFA_04130 IPR006274 Carbamoyl-phosphate synthase, small subunit AFA_04135 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AFA_04135 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AFA_04135 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AFA_04135 IPR006275 Carbamoyl-phosphate synthase, large subunit AFA_04135 IPR011761 ATP-grasp fold AFA_04135 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AFA_04135 IPR011607 Methylglyoxal synthase-like domain AFA_04135 IPR016185 Pre-ATP-grasp domain superfamily AFA_04135 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AFA_04135 IPR036914 Methylglyoxal synthase-like domain superfamily AFA_04145 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_04145 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_04145 IPR036291 NAD(P)-binding domain superfamily AFA_04145 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_04150 IPR023086 Phosphoglycerate mutase, GpmB, probable AFA_04150 IPR029033 Histidine phosphatase superfamily AFA_04150 IPR013078 Histidine phosphatase superfamily, clade-1 AFA_04150 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AFA_04155 IPR006043 Xanthine/uracil/vitamin C permease AFA_04155 IPR019918 Pyrimidine permease RutG, predicted AFA_04155 IPR006042 Xanthine/uracil permease AFA_04160 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AFA_04160 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AFA_04160 IPR023459 Transcription elongation factor GreA/GreB family AFA_04160 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AFA_04160 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AFA_04160 IPR006359 Transcription elongation factor GreA AFA_04160 IPR028624 Transcription elongation factor GreA/GreB AFA_04160 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AFA_04165 IPR035920 YhbY-like superfamily AFA_04165 IPR017924 RNA-binding protein YhbY AFA_04165 IPR001890 RNA-binding, CRM domain AFA_04170 IPR015507 Ribosomal RNA large subunit methyltransferase E AFA_04170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_04170 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AFA_04175 IPR003959 ATPase, AAA-type, core AFA_04175 IPR003960 ATPase, AAA-type, conserved site AFA_04175 IPR005936 Peptidase, FtsH AFA_04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04175 IPR011546 Peptidase M41, FtsH extracellular AFA_04175 IPR037219 Peptidase M41-like AFA_04175 IPR000642 Peptidase M41 AFA_04175 IPR041569 AAA ATPase, AAA+ lid domain AFA_04175 IPR003593 AAA+ ATPase domain AFA_04180 IPR006390 Dihydropteroate synthase AFA_04180 IPR011005 Dihydropteroate synthase-like AFA_04180 IPR000489 Pterin-binding domain AFA_04185 IPR016066 Alpha-D-phosphohexomutase, conserved site AFA_04185 IPR005841 Alpha-D-phosphohexomutase superfamily AFA_04185 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AFA_04185 IPR006352 Phosphoglucosamine mutase, bacterial type AFA_04185 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AFA_04185 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AFA_04185 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AFA_04185 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AFA_04185 IPR005843 Alpha-D-phosphohexomutase, C-terminal AFA_04195 IPR003695 Ppx/GppA phosphatase AFA_04195 IPR022371 Exopolyphosphatase AFA_04195 IPR030673 Pyrophosphatase, GppA/Ppx-type AFA_04200 IPR024953 Polyphosphate kinase middle domain AFA_04200 IPR036830 Polyphosphate kinase middle domain superfamily AFA_04200 IPR025198 Polyphosphate kinase N-terminal domain AFA_04200 IPR003414 Polyphosphate kinase AFA_04200 IPR036832 Polyphosphate kinase N-terminal domain superfamily AFA_04200 IPR025200 Polyphosphate kinase C-terminal domain 2 AFA_04200 IPR041108 Polyphosphate kinase, C-terminal domain 1 AFA_04205 IPR024370 PBP domain AFA_04205 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS AFA_04210 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_04210 IPR011864 Phosphate ABC transporter, permease protein PstC AFA_04210 IPR035906 MetI-like superfamily AFA_04215 IPR005672 Phosphate transport system permease protein PstA AFA_04215 IPR035906 MetI-like superfamily AFA_04215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_04220 IPR015850 ABC transporter, phosphate import, PstB AFA_04220 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04220 IPR005670 Phosphate transport system permease protein 1 AFA_04220 IPR017871 ABC transporter, conserved site AFA_04220 IPR003439 ABC transporter-like AFA_04220 IPR003593 AAA+ ATPase domain AFA_04225 IPR000873 AMP-dependent synthetase/ligase AFA_04225 IPR020845 AMP-binding, conserved site AFA_04225 IPR025110 AMP-binding enzyme, C-terminal domain AFA_04225 IPR042099 AMP-dependent synthetase-like superfamily AFA_04240 IPR011006 CheY-like superfamily AFA_04240 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04240 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_04240 IPR039420 Transcriptional regulatory protein WalR-like AFA_04240 IPR001789 Signal transduction response regulator, receiver domain AFA_04245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_04245 IPR003594 Histidine kinase/HSP90-like ATPase AFA_04245 IPR005467 Histidine kinase domain AFA_04245 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_04245 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_04245 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_04245 IPR003660 HAMP domain AFA_04255 IPR018313 Solute-binding protein family 3, conserved site AFA_04255 IPR037298 Cyclohexadienyl dehydratase pheC AFA_04255 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_04260 IPR005119 LysR, substrate-binding AFA_04260 IPR036390 Winged helix DNA-binding domain superfamily AFA_04260 IPR000847 Transcription regulator HTH, LysR AFA_04260 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04280 IPR017850 Alkaline-phosphatase-like, core domain superfamily AFA_04280 IPR012160 Lipoteichoic acid synthase-like AFA_04280 IPR000917 Sulfatase, N-terminal AFA_04290 IPR005119 LysR, substrate-binding AFA_04290 IPR000847 Transcription regulator HTH, LysR AFA_04290 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04290 IPR036390 Winged helix DNA-binding domain superfamily AFA_04310 IPR038377 Sodium/glucose symporter superfamily AFA_04310 IPR001734 Sodium/solute symporter AFA_04310 IPR018212 Sodium/solute symporter, conserved site AFA_04310 IPR014083 Cation/acetate symporter ActP AFA_04315 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04315 IPR012906 PaaX-like, N-terminal AFA_04315 IPR013225 PaaX-like, C-terminal AFA_04315 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX AFA_04335 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AFA_04335 IPR006070 YrdC-like domain AFA_04340 IPR008915 Peptidase M50 AFA_04345 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AFA_04345 IPR002220 DapA-like AFA_04345 IPR013785 Aldolase-type TIM barrel AFA_04345 IPR020625 Schiff base-forming aldolase, active site AFA_04345 IPR020624 Schiff base-forming aldolase, conserved site AFA_04350 IPR010653 NlpB/DapX lipoprotein AFA_04350 IPR042268 Outer membrane protein assembly factor BamC, C-terminal AFA_04350 IPR014524 Outer membrane protein assembly factor BamC AFA_04365 IPR004472 Dethiobiotin synthase BioD AFA_04365 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_04370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_04370 IPR005814 Aminotransferase class-III AFA_04370 IPR015424 Pyridoxal phosphate-dependent transferase AFA_04370 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AFA_04375 IPR004839 Aminotransferase, class I/classII AFA_04375 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AFA_04375 IPR015424 Pyridoxal phosphate-dependent transferase AFA_04375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_04375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_04375 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria AFA_04380 IPR017972 Cytochrome P450, conserved site AFA_04380 IPR001128 Cytochrome P450 AFA_04380 IPR036396 Cytochrome P450 superfamily AFA_04380 IPR002397 Cytochrome P450, B-class AFA_04385 IPR004711 Benzoate transporter AFA_04390 IPR003347 JmjC domain AFA_04390 IPR039994 JmjC domain-containing AFA_04395 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AFA_04395 IPR007860 DNA mismatch repair protein MutS, connector domain AFA_04395 IPR017261 DNA mismatch repair protein MutS/MSH AFA_04395 IPR007696 DNA mismatch repair protein MutS, core AFA_04395 IPR007861 DNA mismatch repair protein MutS, clamp AFA_04395 IPR000432 DNA mismatch repair protein MutS, C-terminal AFA_04395 IPR007695 DNA mismatch repair protein MutS-like, N-terminal AFA_04395 IPR005748 DNA mismatch repair protein MutS AFA_04395 IPR036678 MutS, connector domain superfamily AFA_04395 IPR016151 DNA mismatch repair protein MutS, N-terminal AFA_04395 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04400 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AFA_04400 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AFA_04405 IPR039423 TonB-dependent receptor-like AFA_04405 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_04405 IPR010917 TonB-dependent receptor, conserved site AFA_04405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_04405 IPR030149 TonB-dependent siderophore receptor FcuA/FatA AFA_04405 IPR010916 TonB box, conserved site AFA_04405 IPR012910 TonB-dependent receptor, plug domain AFA_04405 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_04405 IPR010105 TonB-dependent siderophore receptor AFA_04415 IPR003838 ABC transporter permease protein domain AFA_04415 IPR003439 ABC transporter-like AFA_04415 IPR017911 ABC transporter, macrolide export, ATP-binding domain AFA_04415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04415 IPR017871 ABC transporter, conserved site AFA_04415 IPR025857 MacB-like periplasmic core domain AFA_04415 IPR003593 AAA+ ATPase domain AFA_04420 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AFA_04420 IPR003423 Outer membrane efflux protein AFA_04425 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase AFA_04425 IPR037171 NagB/RpiA transferase-like AFA_04425 IPR018321 Glucosamine-6-phosphate isomerase, conserved site AFA_04425 IPR004547 Glucosamine-6-phosphate isomerase AFA_04430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04430 IPR017871 ABC transporter, conserved site AFA_04430 IPR036640 ABC transporter type 1, transmembrane domain superfamily AFA_04430 IPR003439 ABC transporter-like AFA_04430 IPR011527 ABC transporter type 1, transmembrane domain AFA_04430 IPR039421 Type I protein exporter AFA_04430 IPR003593 AAA+ ATPase domain AFA_04435 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_04440 IPR005064 Bordetella uptake gene AFA_04440 IPR042100 Bordetella uptake gene, domain 1 AFA_04445 IPR000847 Transcription regulator HTH, LysR AFA_04445 IPR036390 Winged helix DNA-binding domain superfamily AFA_04445 IPR005119 LysR, substrate-binding AFA_04445 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04445 IPR037421 HTH-type transcriptional regulator ClcR, PBP2 domain AFA_04450 IPR036661 Luciferase-like domain superfamily AFA_04450 IPR019949 Luciferase family oxidoreductase, group 1 AFA_04450 IPR011251 Luciferase-like domain AFA_04460 IPR011066 Mechanosensitive ion channel MscS, C-terminal AFA_04460 IPR006685 Mechanosensitive ion channel MscS AFA_04460 IPR010920 LSM domain superfamily AFA_04460 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AFA_04460 IPR023408 Mechanosensitive ion channel MscS domain superfamily AFA_04460 IPR008910 Conserved TM helix AFA_04460 IPR006686 Mechanosensitive ion channel MscS, conserved site AFA_04465 IPR005119 LysR, substrate-binding AFA_04465 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain AFA_04465 IPR000847 Transcription regulator HTH, LysR AFA_04465 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04465 IPR036390 Winged helix DNA-binding domain superfamily AFA_04470 IPR015083 Polyketide synthase, docking domain AFA_04470 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AFA_04470 IPR020807 Polyketide synthase, dehydratase domain AFA_04470 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AFA_04470 IPR013154 Alcohol dehydrogenase, N-terminal AFA_04470 IPR014043 Acyl transferase AFA_04470 IPR011032 GroES-like superfamily AFA_04470 IPR018201 Beta-ketoacyl synthase, active site AFA_04470 IPR020843 Polyketide synthase, enoylreductase domain AFA_04470 IPR014030 Beta-ketoacyl synthase, N-terminal AFA_04470 IPR013968 Polyketide synthase, ketoreductase domain AFA_04470 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AFA_04470 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AFA_04470 IPR036291 NAD(P)-binding domain superfamily AFA_04470 IPR032821 Ketoacyl-synthetase, C-terminal extension AFA_04470 IPR036736 ACP-like superfamily AFA_04470 IPR016039 Thiolase-like AFA_04470 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AFA_04470 IPR006162 Phosphopantetheine attachment site AFA_04470 IPR009081 Phosphopantetheine binding ACP domain AFA_04470 IPR001227 Acyl transferase domain superfamily AFA_04470 IPR014031 Beta-ketoacyl synthase, C-terminal AFA_04470 IPR042104 Polyketide synthase, dehydratase domain superfamily AFA_04475 IPR002736 Triphosphoribosyl-dephospho-CoA protein AFA_04475 IPR017555 Triphosphoribosyl-dephospho-CoA synthase AFA_04490 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AFA_04490 IPR017556 Biotin-independent malonate decarboxylase, beta subunit AFA_04490 IPR029045 ClpP/crotonase-like domain superfamily AFA_04490 IPR034733 Acetyl-CoA carboxylase AFA_04495 IPR009662 Malonate decarboxylase delta subunit AFA_04495 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AFA_04500 IPR005777 Acetyl-S-ACP:malonate ACP transferase AFA_04500 IPR037171 NagB/RpiA transferase-like AFA_04505 IPR036928 Amidase signature (AS) superfamily AFA_04505 IPR000120 Amidase AFA_04505 IPR020556 Amidase, conserved site AFA_04505 IPR023631 Amidase signature domain AFA_04505 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AFA_04510 IPR006161 Conserved hypothetical protein CHP00336 AFA_04510 IPR006160 Short chain fatty acid transporter AtoE AFA_04520 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AFA_04520 IPR001537 tRNA/rRNA methyltransferase, SpoU type AFA_04520 IPR004384 RNA methyltransferase TrmJ/LasT AFA_04520 IPR029028 Alpha/beta knot methyltransferases AFA_04525 IPR000760 Inositol monophosphatase-like AFA_04525 IPR020583 Inositol monophosphatase, metal-binding site AFA_04525 IPR033942 Inositol monophosphatase AFA_04525 IPR022337 Inositol monophosphatase, SuhB AFA_04525 IPR020550 Inositol monophosphatase, conserved site AFA_04530 IPR000644 CBS domain AFA_04530 IPR036318 FAD-binding, type PCMH-like superfamily AFA_04530 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_04530 IPR005496 Integral membrane protein TerC AFA_04530 IPR005170 Transporter-associated domain AFA_04535 IPR003824 Undecaprenyl-diphosphatase UppP AFA_04540 IPR010138 UDP-2,3-diacylglucosamine hydrolase AFA_04540 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AFA_04545 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AFA_04545 IPR029000 Cyclophilin-like domain superfamily AFA_04545 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AFA_04545 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AFA_04555 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AFA_04555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_04555 IPR032678 tRNA synthetases class I, catalytic domain AFA_04555 IPR015803 Cysteine-tRNA ligase AFA_04555 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AFA_04555 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AFA_04565 IPR001095 Acetyl-CoA carboxylase, alpha subunit AFA_04565 IPR029045 ClpP/crotonase-like domain superfamily AFA_04565 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AFA_04570 IPR012094 tRNA(Ile)-lysidine synthase AFA_04570 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal AFA_04570 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain AFA_04570 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AFA_04570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_04575 IPR002912 ACT domain AFA_04575 IPR036393 Acetylglutamate kinase-like superfamily AFA_04575 IPR005260 Aspartate kinase, monofunctional class AFA_04575 IPR001048 Aspartate/glutamate/uridylate kinase AFA_04575 IPR041740 Aspartokinase catalytic domain AFA_04575 IPR027795 CASTOR, ACT domain AFA_04575 IPR018042 Aspartate kinase, conserved site AFA_04575 IPR001341 Aspartate kinase AFA_04590 IPR010200 HflC AFA_04590 IPR036013 Band 7/SPFH domain superfamily AFA_04590 IPR001107 Band 7 domain AFA_04600 IPR037923 Transcription regulator HTH-like AFA_04600 IPR020449 Transcription regulator HTH, AraC- type AFA_04600 IPR018060 DNA binding HTH domain, AraC-type AFA_04600 IPR023609 Transcription regulator HTH, RhaS AFA_04600 IPR018062 HTH domain AraC-type, conserved site AFA_04600 IPR014710 RmlC-like jelly roll fold AFA_04600 IPR003313 AraC-type arabinose-binding/dimerisation domain AFA_04600 IPR009057 Homeobox-like domain superfamily AFA_04605 IPR000132 Nitrilase/cyanide hydratase, conserved site AFA_04605 IPR003010 Carbon-nitrogen hydrolase AFA_04605 IPR036526 Carbon-nitrogen hydrolase superfamily AFA_04615 IPR011004 Trimeric LpxA-like superfamily AFA_04615 IPR001451 Hexapeptide repeat AFA_04615 IPR023446 Carnitine operon protein CaiE AFA_04630 IPR005667 Sulphate ABC transporter permease protein 2 AFA_04630 IPR035906 MetI-like superfamily AFA_04630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_04630 IPR011866 Sulphate ABC transporter, permease protein CysW AFA_04635 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AFA_04635 IPR013611 Transport-associated OB, type 2 AFA_04635 IPR003593 AAA+ ATPase domain AFA_04635 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04635 IPR008995 Molybdate/tungstate binding, C-terminal AFA_04635 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA AFA_04635 IPR017871 ABC transporter, conserved site AFA_04635 IPR003439 ABC transporter-like AFA_04640 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 AFA_04640 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AFA_04640 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 AFA_04640 IPR036291 NAD(P)-binding domain superfamily AFA_04640 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AFA_04645 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal AFA_04650 IPR034300 NADP transhydrogenase beta-like domain AFA_04650 IPR012136 NADP transhydrogenase, beta subunit AFA_04650 IPR029035 DHS-like NAD/FAD-binding domain superfamily AFA_04675 IPR020920 L-lactate dehydrogenase, bacterial AFA_04675 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AFA_04675 IPR000262 FMN-dependent dehydrogenase AFA_04675 IPR037396 FMN hydroxy acid dehydrogenase domain AFA_04675 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AFA_04675 IPR013785 Aldolase-type TIM barrel AFA_04680 IPR036249 Thioredoxin-like superfamily AFA_04680 IPR010987 Glutathione S-transferase, C-terminal-like AFA_04680 IPR004045 Glutathione S-transferase, N-terminal AFA_04680 IPR040079 Glutathione Transferase family AFA_04680 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_04680 IPR016639 Glutathione S-transferase Omega/GSH AFA_04685 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic AFA_04685 IPR008254 Flavodoxin/nitric oxide synthase AFA_04685 IPR010089 Flavoprotein WrbA-like AFA_04685 IPR005025 NADPH-dependent FMN reductase-like AFA_04685 IPR029039 Flavoprotein-like superfamily AFA_04700 IPR036995 Methylpurine-DNA glycosylase superfamily AFA_04700 IPR011034 Formyl transferase-like, C-terminal domain superfamily AFA_04700 IPR003180 Methylpurine-DNA glycosylase AFA_04710 IPR006696 Protein of unknown function DUF423 AFA_04715 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AFA_04715 IPR004488 Magnesium/cobalt transport protein CorA AFA_04720 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_04720 IPR041504 Adaptive response protein AidB, N-terminal AFA_04720 IPR006089 Acyl-CoA dehydrogenase, conserved site AFA_04720 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_04720 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_04720 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_04720 IPR034184 Putative acyl-CoA dehydrogenase AidB AFA_04730 IPR030678 Peptide/nickel binding protein, MppA-type AFA_04730 IPR039424 Solute-binding protein family 5 AFA_04730 IPR023765 Solute-binding protein family 5, conserved site AFA_04730 IPR000914 Solute-binding protein family 5 domain AFA_04735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_04735 IPR035906 MetI-like superfamily AFA_04740 IPR035906 MetI-like superfamily AFA_04740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_04740 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AFA_04745 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04745 IPR017871 ABC transporter, conserved site AFA_04745 IPR003439 ABC transporter-like AFA_04745 IPR003593 AAA+ ATPase domain AFA_04745 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AFA_04755 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_04755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04755 IPR002197 DNA binding HTH domain, Fis-type AFA_04755 IPR009057 Homeobox-like domain superfamily AFA_04755 IPR025944 Sigma-54 interaction domain, conserved site AFA_04755 IPR003593 AAA+ ATPase domain AFA_04755 IPR003018 GAF domain AFA_04755 IPR029016 GAF-like domain superfamily AFA_04760 IPR016161 Aldehyde/histidinol dehydrogenase AFA_04760 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_04760 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_04760 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_04760 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_04760 IPR015590 Aldehyde dehydrogenase domain AFA_04765 IPR039697 Iron-type alcohol dehydrogenase-like AFA_04765 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AFA_04765 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AFA_04770 IPR008991 Translation protein SH3-like domain superfamily AFA_04770 IPR011768 Translation elongation factor P AFA_04770 IPR013852 Translation elongation factor P/YeiP, conserved site AFA_04770 IPR001059 Translation elongation factor P/YeiP, central AFA_04770 IPR012340 Nucleic acid-binding, OB-fold AFA_04770 IPR013185 Translation elongation factor, KOW-like AFA_04770 IPR020599 Translation elongation factor P/YeiP AFA_04770 IPR014722 Ribosomal protein L2, domain 2 AFA_04770 IPR015365 Elongation factor P, C-terminal AFA_04785 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_04785 IPR004681 TRAP transporter large membrane protein DctM AFA_04785 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_04785 IPR004681 TRAP transporter large membrane protein DctM AFA_04795 IPR026289 Solute binding protein, TakP-like AFA_04795 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_04795 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_04795 IPR041721 Lactate-binding periplasmic protein TTHA0766 AFA_04795 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_04800 IPR015933 Aconitase B, HEAT-like domain AFA_04800 IPR036008 Aconitase, iron-sulfur domain AFA_04800 IPR018136 Aconitase family, 4Fe-4S cluster binding site AFA_04800 IPR015932 Aconitase, domain 2 AFA_04800 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AFA_04800 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AFA_04800 IPR015929 Aconitase B, swivel AFA_04800 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AFA_04800 IPR004406 Aconitase B AFA_04800 IPR036288 Aconitase B, HEAT-like domain superfamily AFA_04815 IPR011278 2-methylcitrate synthase/citrate synthase type I AFA_04815 IPR036969 Citrate synthase superfamily AFA_04815 IPR024176 Citrate synthase, bacterial-type AFA_04815 IPR019810 Citrate synthase active site AFA_04815 IPR002020 Citrate synthase AFA_04815 IPR016143 Citrate synthase-like, small alpha subdomain AFA_04815 IPR016142 Citrate synthase-like, large alpha subdomain AFA_04820 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_04820 IPR039556 ICL/PEPM domain AFA_04820 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AFA_04820 IPR012695 2-methylisocitrate lyase AFA_04820 IPR040442 Pyruvate kinase-like domain superfamily AFA_04825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04825 IPR003593 AAA+ ATPase domain AFA_04825 IPR009057 Homeobox-like domain superfamily AFA_04825 IPR002197 DNA binding HTH domain, Fis-type AFA_04825 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR AFA_04825 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal AFA_04825 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_04825 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_04825 IPR025944 Sigma-54 interaction domain, conserved site AFA_04830 IPR011701 Major facilitator superfamily AFA_04830 IPR036259 MFS transporter superfamily AFA_04830 IPR020846 Major facilitator superfamily domain AFA_04840 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AFA_04840 IPR036291 NAD(P)-binding domain superfamily AFA_04840 IPR010945 Malate dehydrogenase, type 2 AFA_04840 IPR001236 Lactate/malate dehydrogenase, N-terminal AFA_04840 IPR022383 Lactate/malate dehydrogenase, C-terminal AFA_04840 IPR001557 L-lactate/malate dehydrogenase AFA_04845 IPR000524 Transcription regulator HTH, GntR AFA_04845 IPR011663 UbiC transcription regulator-associated AFA_04845 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AFA_04845 IPR036390 Winged helix DNA-binding domain superfamily AFA_04845 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04850 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AFA_04850 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site AFA_04850 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AFA_04850 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AFA_04860 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_04860 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AFA_04860 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AFA_04860 IPR011281 Succinate dehydrogenase, flavoprotein subunit AFA_04860 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AFA_04860 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AFA_04860 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AFA_04860 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AFA_04865 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AFA_04865 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_04865 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_04865 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_04865 IPR012675 Beta-grasp domain superfamily AFA_04865 IPR009051 Alpha-helical ferredoxin AFA_04865 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AFA_04865 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_04870 IPR036714 Flavinator of succinate dehydrogenase superfamily AFA_04870 IPR005631 Flavinator of succinate dehydrogenase AFA_04875 IPR010953 Citrate synthase, type I AFA_04875 IPR036969 Citrate synthase superfamily AFA_04875 IPR024176 Citrate synthase, bacterial-type AFA_04875 IPR019810 Citrate synthase active site AFA_04875 IPR002020 Citrate synthase AFA_04875 IPR016143 Citrate synthase-like, small alpha subdomain AFA_04875 IPR016142 Citrate synthase-like, large alpha subdomain AFA_04880 IPR036390 Winged helix DNA-binding domain superfamily AFA_04880 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_04880 IPR000524 Transcription regulator HTH, GntR AFA_04880 IPR008920 Transcription regulator FadR/GntR, C-terminal AFA_04880 IPR011711 GntR, C-terminal AFA_04885 IPR003804 L-lactate permease AFA_04890 IPR036291 NAD(P)-binding domain superfamily AFA_04890 IPR042113 Phosphate acetyltransferase, domain 1 AFA_04890 IPR012188 NAD(P)-dependent malic enzyme AFA_04890 IPR012302 Malic enzyme, NAD-binding AFA_04890 IPR037062 Malic enzyme, N-terminal domain superfamily AFA_04890 IPR012301 Malic enzyme, N-terminal domain AFA_04890 IPR015884 Malic enzyme, conserved site AFA_04890 IPR042112 Phosphate acetyltransferase, domain 2 AFA_04890 IPR002505 Phosphate acetyl/butaryl transferase AFA_04895 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain AFA_04895 IPR011603 2-oxoglutarate dehydrogenase E1 component AFA_04895 IPR001017 Dehydrogenase, E1 component AFA_04895 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal AFA_04895 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily AFA_04895 IPR029061 Thiamin diphosphate-binding fold AFA_04895 IPR005475 Transketolase-like, pyrimidine-binding domain AFA_04900 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AFA_04900 IPR000089 Biotin/lipoyl attachment AFA_04900 IPR036625 E3-binding domain superfamily AFA_04900 IPR004167 Peripheral subunit-binding domain AFA_04900 IPR011053 Single hybrid motif AFA_04900 IPR006255 Dihydrolipoamide succinyltransferase AFA_04900 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AFA_04900 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AFA_04905 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AFA_04905 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_04905 IPR023753 FAD/NAD(P)-binding domain AFA_04905 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AFA_04905 IPR006258 Dihydrolipoamide dehydrogenase AFA_04905 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AFA_04905 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFA_04910 IPR030870 Cell division protein ZapE AFA_04910 IPR005654 ATPase, AFG1-like AFA_04910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04915 IPR002306 Tryptophan-tRNA ligase AFA_04915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_04915 IPR002305 Aminoacyl-tRNA synthetase, class Ic AFA_04915 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_04915 IPR036913 YegP-like superfamily AFA_04915 IPR024109 Tryptophan-tRNA ligase, bacterial-type AFA_04920 IPR011004 Trimeric LpxA-like superfamily AFA_04920 IPR018357 Hexapeptide transferase, conserved site AFA_04920 IPR001451 Hexapeptide repeat AFA_04930 IPR041692 HHH domain 9 AFA_04930 IPR012340 Nucleic acid-binding, OB-fold AFA_04930 IPR012337 Ribonuclease H-like superfamily AFA_04930 IPR010994 RuvA domain 2-like AFA_04930 IPR022967 RNA-binding domain, S1 AFA_04930 IPR037027 YqgF/RNase H-like domain superfamily AFA_04930 IPR003029 S1 domain AFA_04930 IPR023323 Tex-like domain superfamily AFA_04930 IPR006641 YqgF/RNase H-like domain AFA_04930 IPR018974 Tex-like protein, N-terminal AFA_04930 IPR032639 Tex protein, YqgF-like domain AFA_04930 IPR023319 Tex-like protein, HTH domain superfamily AFA_04935 IPR006935 Helicase/UvrB, N-terminal AFA_04935 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type AFA_04935 IPR006555 ATP-dependent helicase, C-terminal AFA_04935 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_04935 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_04940 IPR011547 SLC26A/SulP transporter domain AFA_04940 IPR036513 STAS domain superfamily AFA_04940 IPR002645 STAS domain AFA_04940 IPR001902 SLC26A/SulP transporter AFA_04940 IPR018045 Sulphate anion transporter, conserved site AFA_04945 IPR014710 RmlC-like jelly roll fold AFA_04945 IPR010424 Ethanolamine utilisation EutQ AFA_04945 IPR011051 RmlC-like cupin domain superfamily AFA_04950 IPR008471 MnmC-like methyltransferase AFA_04950 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC AFA_04950 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal AFA_04950 IPR006076 FAD dependent oxidoreductase AFA_04950 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_04965 IPR004681 TRAP transporter large membrane protein DctM AFA_04965 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_04970 IPR013572 Transcription regulator MAATS, C-terminal AFA_04970 IPR001647 DNA-binding HTH domain, TetR-type AFA_04970 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AFA_04970 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AFA_04970 IPR009057 Homeobox-like domain superfamily AFA_04975 IPR017689 Outer membrane protein assembly factor BamD AFA_04975 IPR011990 Tetratricopeptide-like helical domain superfamily AFA_04975 IPR039565 Outer membrane lipoprotein BamD-like AFA_04980 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_04980 IPR002942 RNA-binding S4 domain AFA_04980 IPR036986 RNA-binding S4 domain superfamily AFA_04980 IPR006145 Pseudouridine synthase, RsuA/RluA AFA_04980 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AFA_04980 IPR006225 Pseudouridine synthase, RluC/RluD AFA_04990 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain AFA_04990 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I AFA_04990 IPR029058 Alpha/Beta hydrolase fold AFA_04995 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_04995 IPR036291 NAD(P)-binding domain superfamily AFA_04995 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_04995 IPR011283 Acetoacetyl-CoA reductase AFA_05000 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR AFA_05000 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AFA_05000 IPR007897 PHB accumulation regulatory AFA_05025 IPR034690 Endolysin T4 type AFA_05025 IPR002196 Glycoside hydrolase, family 24 AFA_05025 IPR023346 Lysozyme-like domain superfamily AFA_05085 IPR005234 Chromosome segregation/condensation protein ScpB AFA_05085 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_05085 IPR036390 Winged helix DNA-binding domain superfamily AFA_05090 IPR002942 RNA-binding S4 domain AFA_05090 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AFA_05090 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_05090 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AFA_05090 IPR006145 Pseudouridine synthase, RsuA/RluA AFA_05090 IPR036986 RNA-binding S4 domain superfamily AFA_05090 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AFA_05095 IPR028989 Ribosome maturation factor RimP, N-terminal AFA_05095 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AFA_05095 IPR028998 Ribosome maturation factor RimP, C-terminal AFA_05095 IPR003728 Ribosome maturation factor RimP AFA_05095 IPR035956 RimP, N-terminal domain superfamily AFA_05100 IPR009019 K homology domain superfamily, prokaryotic type AFA_05100 IPR010213 Transcription termination factor NusA AFA_05100 IPR012340 Nucleic acid-binding, OB-fold AFA_05100 IPR013735 Transcription factor NusA, N-terminal AFA_05100 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical AFA_05100 IPR004087 K Homology domain AFA_05100 IPR010214 Transcription termination factor NusA, C-terminal duplication AFA_05100 IPR022967 RNA-binding domain, S1 AFA_05100 IPR036555 NusA, N-terminal domain superfamily AFA_05100 IPR030842 Transcription termination/antitermination protein NusA, bacterial AFA_05100 IPR025249 KH domain, NusA-like AFA_05100 IPR015946 K homology domain-like, alpha/beta AFA_05100 IPR003029 S1 domain AFA_05105 IPR023115 Translation initiation factor IF- 2, domain 3 AFA_05105 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AFA_05105 IPR009000 Translation protein, beta-barrel domain superfamily AFA_05105 IPR015760 Translation initiation factor IF- 2 AFA_05105 IPR000178 Translation initiation factor aIF-2, bacterial-like AFA_05105 IPR009061 Putative DNA-binding domain superfamily AFA_05105 IPR013575 Initiation factor 2 associated domain, bacterial AFA_05105 IPR006847 Translation initiation factor IF-2, N-terminal AFA_05105 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05105 IPR005225 Small GTP-binding protein domain AFA_05105 IPR000795 Transcription factor, GTP-binding domain AFA_05110 IPR015946 K homology domain-like, alpha/beta AFA_05110 IPR000238 Ribosome-binding factor A AFA_05110 IPR023799 Ribosome-binding factor A domain superfamily AFA_05115 IPR032819 tRNA pseudouridylate synthase B, C-terminal AFA_05115 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_05115 IPR002501 Pseudouridine synthase II, N-terminal AFA_05115 IPR014780 tRNA pseudouridine synthase II, TruB AFA_05125 IPR023753 FAD/NAD(P)-binding domain AFA_05125 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_05135 IPR035906 MetI-like superfamily AFA_05135 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_05135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_05140 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_05140 IPR030199 Histidine transport system permease protein HisQ AFA_05140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_05140 IPR035906 MetI-like superfamily AFA_05145 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_05145 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter AFA_05145 IPR018313 Solute-binding protein family 3, conserved site AFA_05150 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AFA_05150 IPR031100 LOG family AFA_05155 IPR001098 DNA-directed DNA polymerase, family A, palm domain AFA_05155 IPR018320 DNA polymerase 1 AFA_05155 IPR019760 DNA-directed DNA polymerase, family A, conserved site AFA_05155 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AFA_05155 IPR002421 5'-3' exonuclease, N-terminal AFA_05155 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AFA_05155 IPR002562 3'-5' exonuclease domain AFA_05155 IPR008918 Helix-hairpin-helix motif, class 2 AFA_05155 IPR029060 PIN-like domain superfamily AFA_05155 IPR012337 Ribonuclease H-like superfamily AFA_05155 IPR036397 Ribonuclease H superfamily AFA_05155 IPR020045 DNA polymerase I-like, H3TH domain AFA_05155 IPR002298 DNA polymerase A AFA_05160 IPR003841 Sodium-dependent phosphate transport protein AFA_05160 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein AFA_05165 IPR022919 Peptidase M48, protease HtpX, putative AFA_05165 IPR001915 Peptidase M48 AFA_05175 IPR001763 Rhodanese-like domain AFA_05175 IPR036873 Rhodanese-like domain superfamily AFA_05180 IPR003761 Exonuclease VII, small subunit AFA_05180 IPR037004 Exonuclease VII, small subunit superfamily AFA_05185 IPR008949 Isoprenoid synthase domain superfamily AFA_05185 IPR000092 Polyprenyl synthetase AFA_05185 IPR033749 Polyprenyl synthetase, conserved site AFA_05190 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AFA_05190 IPR005475 Transketolase-like, pyrimidine-binding domain AFA_05190 IPR020826 Transketolase binding site AFA_05190 IPR033248 Transketolase, C-terminal domain AFA_05190 IPR005477 Deoxyxylulose-5-phosphate synthase AFA_05190 IPR029061 Thiamin diphosphate-binding fold AFA_05190 IPR005474 Transketolase, N-terminal AFA_05195 IPR003801 GTP cyclohydrolase FolE2/MptA AFA_05195 IPR022838 GTP cyclohydrolase FolE2 AFA_05200 IPR020814 Ribosomal protein S6, plastid/chloroplast AFA_05200 IPR000529 Ribosomal protein S6 AFA_05200 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AFA_05200 IPR035980 Ribosomal protein S6 superfamily AFA_05205 IPR023646 Primosomal replication protein PriB AFA_05205 IPR012340 Nucleic acid-binding, OB-fold AFA_05205 IPR000424 Primosome PriB/single-strand DNA-binding AFA_05210 IPR018275 Ribosomal protein S18, conserved site AFA_05210 IPR036870 Ribosomal protein S18 superfamily AFA_05210 IPR001648 Ribosomal protein S18 AFA_05215 IPR020594 Ribosomal protein L9, bacteria/chloroplast AFA_05215 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AFA_05215 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AFA_05215 IPR036935 Ribosomal protein L9, N-terminal domain superfamily AFA_05215 IPR000244 Ribosomal protein L9 AFA_05215 IPR020070 Ribosomal protein L9, N-terminal AFA_05215 IPR020069 Ribosomal protein L9, C-terminal AFA_05220 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05220 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily AFA_05220 IPR003593 AAA+ ATPase domain AFA_05220 IPR007693 DNA helicase, DnaB-like, N-terminal AFA_05220 IPR007692 DNA helicase, DnaB type AFA_05220 IPR007694 DNA helicase, DnaB-like, C-terminal AFA_05220 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AFA_05225 IPR016833 Putative sodium bile acid cotransporter AFA_05225 IPR038770 Sodium/solute symporter superfamily AFA_05230 IPR005255 PdxA family AFA_05235 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05235 IPR029060 PIN-like domain superfamily AFA_05235 IPR002716 PIN domain AFA_05235 IPR003714 PhoH-like protein AFA_05240 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AFA_05240 IPR036249 Thioredoxin-like superfamily AFA_05240 IPR013766 Thioredoxin domain AFA_05245 IPR036748 MTH938-like superfamily AFA_05245 IPR007523 NDUFAF3/Mth938 domain-containing protein AFA_05250 IPR004839 Aminotransferase, class I/classII AFA_05250 IPR015424 Pyridoxal phosphate-dependent transferase AFA_05250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_05250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_05255 IPR036291 NAD(P)-binding domain superfamily AFA_05255 IPR019811 Homoserine dehydrogenase, conserved site AFA_05255 IPR001342 Homoserine dehydrogenase, catalytic AFA_05255 IPR016204 Homoserine dehydrogenase AFA_05255 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AFA_05255 IPR002912 ACT domain AFA_05260 IPR037158 Threonine synthase, N-terminal domain superfamily AFA_05260 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AFA_05260 IPR029144 Threonine synthase, N-terminal AFA_05260 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_05260 IPR004450 Threonine synthase-like AFA_05260 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_05270 IPR016181 Acyl-CoA N-acyltransferase AFA_05270 IPR000182 GNAT domain AFA_05275 IPR002937 Amine oxidase AFA_05275 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_05275 IPR014103 Zeta-carotene desaturase AFA_05280 IPR019845 Squalene/phytoene synthase, conserved site AFA_05280 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head AFA_05280 IPR008949 Isoprenoid synthase domain superfamily AFA_05285 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head AFA_05285 IPR008949 Isoprenoid synthase domain superfamily AFA_05285 IPR017827 Hydroxysqualene synthase HpnC AFA_05290 IPR011079 Alanine racemase, C-terminal AFA_05290 IPR001608 Alanine racemase, N-terminal AFA_05290 IPR029066 PLP-binding barrel AFA_05290 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AFA_05290 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AFA_05290 IPR000821 Alanine racemase AFA_05295 IPR036291 NAD(P)-binding domain superfamily AFA_05295 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_05295 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_05295 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_05300 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05300 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AFA_05300 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_05300 IPR041166 LapB, rubredoxin metal binding domain AFA_05300 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_05300 IPR004504 DNA repair protein RadA AFA_05300 IPR003593 AAA+ ATPase domain AFA_05310 IPR011009 Protein kinase-like domain superfamily AFA_05310 IPR022826 3-deoxy-D-manno-octulosonic acid kinase AFA_05315 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AFA_05315 IPR006059 Bacterial extracellular solute-binding protein AFA_05320 IPR003593 AAA+ ATPase domain AFA_05320 IPR003439 ABC transporter-like AFA_05320 IPR013611 Transport-associated OB, type 2 AFA_05320 IPR017871 ABC transporter, conserved site AFA_05320 IPR008995 Molybdate/tungstate binding, C-terminal AFA_05320 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AFA_05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05325 IPR035906 MetI-like superfamily AFA_05325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_05330 IPR035906 MetI-like superfamily AFA_05330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_05335 IPR006660 Arsenate reductase-like AFA_05335 IPR036249 Thioredoxin-like superfamily AFA_05335 IPR006504 Transcriptional regulator Spx/MgsR AFA_05340 IPR037171 NagB/RpiA transferase-like AFA_05340 IPR004788 Ribose 5-phosphate isomerase, type A AFA_05340 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AFA_05345 IPR026022 PhoU domain AFA_05345 IPR038078 PhoU-like domain superfamily AFA_05345 IPR028366 Phosphate transport system protein PhoU AFA_05350 IPR029016 GAF-like domain superfamily AFA_05350 IPR000160 GGDEF domain AFA_05350 IPR029787 Nucleotide cyclase AFA_05350 IPR035919 EAL domain superfamily AFA_05350 IPR016132 Phytochrome chromophore attachment domain AFA_05350 IPR001294 Phytochrome AFA_05350 IPR003018 GAF domain AFA_05350 IPR013515 Phytochrome, central region AFA_05350 IPR001633 EAL domain AFA_05355 IPR036766 Fe(II) trafficking protein YggX superfamily AFA_05355 IPR007457 Fe(II) trafficking protein YggX AFA_05360 IPR016181 Acyl-CoA N-acyltransferase AFA_05360 IPR010167 Amino-acid N-acetyltransferase AFA_05360 IPR033719 N-acetylglutamate synthase, kinase-like domain AFA_05360 IPR000182 GNAT domain AFA_05360 IPR001048 Aspartate/glutamate/uridylate kinase AFA_05360 IPR036393 Acetylglutamate kinase-like superfamily AFA_05365 IPR024590 RNA helicase HrpA, C-terminal AFA_05365 IPR001650 Helicase, C-terminal AFA_05365 IPR011709 Domain of unknown function DUF1605 AFA_05365 IPR011545 DEAD/DEAH box helicase domain AFA_05365 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05365 IPR010222 RNA helicase HrpA AFA_05365 IPR003593 AAA+ ATPase domain AFA_05365 IPR007502 Helicase-associated domain AFA_05365 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_05370 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AFA_05370 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain AFA_05370 IPR040982 DNA polymerase III alpha subunit finger domain AFA_05370 IPR004805 DNA polymerase III, alpha subunit AFA_05370 IPR016195 Polymerase/histidinol phosphatase-like AFA_05370 IPR003141 Polymerase/histidinol phosphatase, N-terminal AFA_05370 IPR004013 PHP domain AFA_05370 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AFA_05370 IPR029460 DNA polymerase, helix-hairpin-helix motif AFA_05375 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA AFA_05375 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AFA_05375 IPR001296 Glycosyl transferase, family 1 AFA_05380 IPR002509 NodB homology domain AFA_05380 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AFA_05385 IPR001173 Glycosyltransferase 2-like AFA_05385 IPR029044 Nucleotide-diphospho-sugar transferases AFA_05395 IPR017814 Mycothiol biosynthesis protein, MshA AFA_05395 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AFA_05395 IPR001296 Glycosyl transferase, family 1 AFA_05405 IPR005358 Putative zinc- or iron-chelating domain containing protein AFA_05420 IPR036640 ABC transporter type 1, transmembrane domain superfamily AFA_05420 IPR011527 ABC transporter type 1, transmembrane domain AFA_05420 IPR003593 AAA+ ATPase domain AFA_05420 IPR003439 ABC transporter-like AFA_05420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05420 IPR017871 ABC transporter, conserved site AFA_05420 IPR011917 ABC transporter, lipid A export, MsbA AFA_05435 IPR022967 RNA-binding domain, S1 AFA_05435 IPR003029 S1 domain AFA_05435 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AFA_05435 IPR012340 Nucleic acid-binding, OB-fold AFA_05435 IPR004659 Ribonuclease E/G AFA_05470 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_05470 IPR006076 FAD dependent oxidoreductase AFA_05480 IPR005119 LysR, substrate-binding AFA_05480 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_05480 IPR036390 Winged helix DNA-binding domain superfamily AFA_05480 IPR000847 Transcription regulator HTH, LysR AFA_05485 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_05490 IPR036390 Winged helix DNA-binding domain superfamily AFA_05490 IPR000524 Transcription regulator HTH, GntR AFA_05490 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_05490 IPR011711 GntR, C-terminal AFA_05490 IPR008920 Transcription regulator FadR/GntR, C-terminal AFA_05495 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AFA_05495 IPR006094 FAD linked oxidase, N-terminal AFA_05495 IPR004113 FAD-linked oxidase, C-terminal AFA_05495 IPR016164 FAD-linked oxidase-like, C-terminal AFA_05495 IPR016166 FAD-binding domain, PCMH-type AFA_05495 IPR004490 Glycolate oxidase subunit GlcD AFA_05495 IPR036318 FAD-binding, type PCMH-like superfamily AFA_05500 IPR036318 FAD-binding, type PCMH-like superfamily AFA_05500 IPR016166 FAD-binding domain, PCMH-type AFA_05500 IPR016164 FAD-linked oxidase-like, C-terminal AFA_05500 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_05500 IPR006094 FAD linked oxidase, N-terminal AFA_05505 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_05505 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_05505 IPR004017 Cysteine-rich domain AFA_05505 IPR012257 Glycolate oxidase, iron-sulphur subunit AFA_05505 IPR009051 Alpha-helical ferredoxin AFA_05510 IPR036291 NAD(P)-binding domain superfamily AFA_05510 IPR000683 Oxidoreductase, N-terminal AFA_05515 IPR034937 Protocatechuate 4,5-dioxygenase beta chain AFA_05515 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AFA_05520 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AFA_05520 IPR014159 Protocatechuate 4,5-dioxygenase, alpha subunit AFA_05520 IPR036622 Dioxygenase LigAB, LigA subunit superfamily AFA_05525 IPR006680 Amidohydrolase-related AFA_05525 IPR032466 Metal-dependent hydrolase AFA_05530 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase AFA_05530 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AFA_05530 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AFA_05535 IPR032465 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase AFA_05535 IPR032466 Metal-dependent hydrolase AFA_05535 IPR006680 Amidohydrolase-related AFA_05540 IPR020846 Major facilitator superfamily domain AFA_05540 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family AFA_05540 IPR005829 Sugar transporter, conserved site AFA_05540 IPR036259 MFS transporter superfamily AFA_05540 IPR011701 Major facilitator superfamily AFA_05545 IPR007400 PrpF protein AFA_05550 IPR036390 Winged helix DNA-binding domain superfamily AFA_05550 IPR000847 Transcription regulator HTH, LysR AFA_05550 IPR005119 LysR, substrate-binding AFA_05550 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_05555 IPR036259 MFS transporter superfamily AFA_05555 IPR020846 Major facilitator superfamily domain AFA_05555 IPR011701 Major facilitator superfamily AFA_05555 IPR004638 Drug resistance transporter EmrB-like AFA_05560 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_05560 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_05560 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_05560 IPR015590 Aldehyde dehydrogenase domain AFA_05560 IPR016161 Aldehyde/histidinol dehydrogenase AFA_05565 IPR036318 FAD-binding, type PCMH-like superfamily AFA_05565 IPR016166 FAD-binding domain, PCMH-type AFA_05565 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily AFA_05565 IPR016164 FAD-linked oxidase-like, C-terminal AFA_05565 IPR004113 FAD-linked oxidase, C-terminal AFA_05565 IPR006094 FAD linked oxidase, N-terminal AFA_05565 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_05565 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AFA_05565 IPR016167 FAD-binding, type PCMH, subdomain 1 AFA_05580 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_05580 IPR012733 4-hydroxybenzoate 3-monooxygenase AFA_05580 IPR002938 FAD-binding domain AFA_05615 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein AFA_05615 IPR003841 Sodium-dependent phosphate transport protein AFA_05630 IPR002299 Porin, Neisseria sp. type AFA_05630 IPR033900 Porin domain, Gram-negative type AFA_05630 IPR023614 Porin domain superfamily AFA_05630 IPR001702 Porin, Gram-negative type AFA_05640 IPR000620 EamA domain AFA_05650 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_05650 IPR005119 LysR, substrate-binding AFA_05650 IPR036390 Winged helix DNA-binding domain superfamily AFA_05650 IPR000847 Transcription regulator HTH, LysR AFA_05655 IPR018383 Uncharacterised protein family UPF0324, prokaryote AFA_05660 IPR007360 Invasion gene expression up-regulator, SirB AFA_05665 IPR001279 Metallo-beta-lactamase AFA_05665 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AFA_05670 IPR036390 Winged helix DNA-binding domain superfamily AFA_05670 IPR001845 HTH ArsR-type DNA-binding domain AFA_05670 IPR011991 ArsR-like helix-turn-helix domain AFA_05670 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_05675 IPR007272 Sulphur transport domain AFA_05685 IPR011794 Hg(II)-responsive transcriptional regulator AFA_05685 IPR000551 MerR-type HTH domain AFA_05685 IPR009061 Putative DNA-binding domain superfamily AFA_05690 IPR023299 P-type ATPase, cytoplasmic domain N AFA_05690 IPR017969 Heavy-metal-associated, conserved site AFA_05690 IPR008250 P-type ATPase, A domain superfamily AFA_05690 IPR036412 HAD-like superfamily AFA_05690 IPR023214 HAD superfamily AFA_05690 IPR006121 Heavy metal-associated domain, HMA AFA_05690 IPR036163 Heavy metal-associated domain superfamily AFA_05690 IPR027256 P-type ATPase, subfamily IB AFA_05690 IPR001757 P-type ATPase AFA_05690 IPR018303 P-type ATPase, phosphorylation site AFA_05690 IPR023298 P-type ATPase, transmembrane domain superfamily AFA_05695 IPR002645 STAS domain AFA_05695 IPR036513 STAS domain superfamily AFA_05695 IPR011547 SLC26A/SulP transporter domain AFA_05695 IPR001902 SLC26A/SulP transporter AFA_05700 IPR016187 C-type lectin fold AFA_05700 IPR042095 Sulfatase-modifying factor enzyme superfamily AFA_05700 IPR005532 Sulfatase-modifying factor enzyme AFA_05705 IPR000917 Sulfatase, N-terminal AFA_05705 IPR017850 Alkaline-phosphatase-like, core domain superfamily AFA_05705 IPR024607 Sulfatase, conserved site AFA_05710 IPR007829 TM2 domain AFA_05715 IPR005999 Glycerol kinase AFA_05715 IPR018483 Carbohydrate kinase, FGGY, conserved site AFA_05715 IPR018485 Carbohydrate kinase, FGGY, C-terminal AFA_05715 IPR000577 Carbohydrate kinase, FGGY AFA_05715 IPR018484 Carbohydrate kinase, FGGY, N-terminal AFA_05720 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily AFA_05720 IPR031656 Alpha-glycerophosphate oxidase, C-terminal AFA_05720 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AFA_05720 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_05720 IPR006076 FAD dependent oxidoreductase AFA_05725 IPR000064 Endopeptidase, NLPC/P60 domain AFA_05725 IPR038765 Papain-like cysteine peptidase superfamily AFA_05730 IPR036194 Flagellar transcriptional activator FlhD superfamily AFA_05730 IPR023559 Flagellar transcriptional activator FlhD AFA_05735 IPR007944 Flagellar transcriptional activator FlhC AFA_05740 IPR000540 Flagellar motor protein MotA, conserved site AFA_05740 IPR022522 Flagellar motor stator, MotA AFA_05740 IPR002898 MotA/TolQ/ExbB proton channel AFA_05745 IPR025713 Motility protein B, N-terminal domain AFA_05745 IPR006665 OmpA-like domain AFA_05745 IPR036737 OmpA-like domain superfamily AFA_05750 IPR003594 Histidine kinase/HSP90-like ATPase AFA_05750 IPR015162 CheY binding AFA_05750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_05750 IPR002545 CheW-like domain AFA_05750 IPR004105 Histidine kinase CheA-like, homodimeric domain AFA_05750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_05750 IPR036641 HPT domain superfamily AFA_05750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_05750 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AFA_05750 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AFA_05750 IPR036061 CheW-like domain superfamily AFA_05750 IPR005467 Histidine kinase domain AFA_05750 IPR035891 CheY-binding domain of CheA AFA_05755 IPR002545 CheW-like domain AFA_05755 IPR036061 CheW-like domain superfamily AFA_05755 IPR039315 Chemotaxis protein CheW AFA_05760 IPR003660 HAMP domain AFA_05760 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AFA_05760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_05760 IPR004090 Chemotaxis methyl-accepting receptor AFA_05760 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AFA_05760 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AFA_05765 IPR026024 Chemotaxis protein methyltransferase CheR AFA_05765 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AFA_05765 IPR000780 MCP methyltransferase, CheR-type AFA_05765 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AFA_05765 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AFA_05765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_05770 IPR001789 Signal transduction response regulator, receiver domain AFA_05770 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AFA_05770 IPR035909 Methylesterase CheB, C-terminal AFA_05770 IPR011006 CheY-like superfamily AFA_05770 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AFA_05775 IPR011006 CheY-like superfamily AFA_05775 IPR001789 Signal transduction response regulator, receiver domain AFA_05780 IPR007439 Chemotaxis phosphatase, CheZ AFA_05785 IPR006136 Flagellar biosynthetic protein FlhB AFA_05785 IPR006135 Type III secretion system substrate exporter AFA_05785 IPR029025 Type III secretion system substrate exporter, C-terminal AFA_05790 IPR001712 Type III secretion system FHIPEP AFA_05790 IPR006301 Flagellar biosynthesis protein FlhA AFA_05790 IPR025505 FHIPEP conserved site AFA_05790 IPR042196 FHIPEP, domain 4 AFA_05790 IPR042194 FHIPEP, domain 1 AFA_05790 IPR042193 FHIPEP, domain 3 AFA_05795 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AFA_05795 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05795 IPR003593 AAA+ ATPase domain AFA_05795 IPR020006 Flagellar biosynthesis protein FlhF AFA_05800 IPR012893 HipA-like, C-terminal AFA_05800 IPR017508 HipA, N-terminal subdomain 1 AFA_05815 IPR007412 Anti-sigma-28 factor, FlgM AFA_05815 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AFA_05815 IPR035890 Anti-sigma-28 factor FlgM superfamily AFA_05825 IPR019776 Flagellar basal body rod protein, conserved site AFA_05825 IPR006300 Flagellar basal-body rod protein FlgB AFA_05825 IPR001444 Flagellar basal body rod protein, N-terminal AFA_05830 IPR001444 Flagellar basal body rod protein, N-terminal AFA_05830 IPR019776 Flagellar basal body rod protein, conserved site AFA_05830 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AFA_05830 IPR006299 Flagellar basal-body rod protein FlgC AFA_05835 IPR005648 Flagellar hook capping protein AFA_05835 IPR025965 FlgD Ig-like domain AFA_05835 IPR025963 FlgD Tudor-like domain AFA_05840 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AFA_05840 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AFA_05840 IPR019776 Flagellar basal body rod protein, conserved site AFA_05840 IPR001444 Flagellar basal body rod protein, N-terminal AFA_05840 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AFA_05840 IPR011491 Flagellar hook protein FlgE AFA_05840 IPR037058 Flagellar hook protein FlgE superfamily AFA_05845 IPR001444 Flagellar basal body rod protein, N-terminal AFA_05845 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AFA_05845 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AFA_05845 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AFA_05845 IPR019776 Flagellar basal body rod protein, conserved site AFA_05850 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AFA_05850 IPR019776 Flagellar basal body rod protein, conserved site AFA_05850 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AFA_05850 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AFA_05850 IPR001444 Flagellar basal body rod protein, N-terminal AFA_05850 IPR012834 Flagellar basal-body rod FlgG AFA_05855 IPR000527 Flagellar L-ring protein AFA_05860 IPR001782 Flagellar P-ring protein AFA_05865 IPR019301 Flagellar protein FlgJ, N-terminal AFA_05865 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AFA_05865 IPR013377 Peptidoglycan hydrolase FlgJ AFA_05870 IPR002371 Flagellar hook-associated protein 1 AFA_05870 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AFA_05870 IPR019776 Flagellar basal body rod protein, conserved site AFA_05870 IPR001444 Flagellar basal body rod protein, N-terminal AFA_05875 IPR013384 Flagellar hook-associated protein 3 AFA_05875 IPR001029 Flagellin, D0/D1 domain AFA_05880 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AFA_05880 IPR004090 Chemotaxis methyl-accepting receptor AFA_05880 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AFA_05880 IPR003660 HAMP domain AFA_05880 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_05880 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AFA_05890 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AFA_05890 IPR004090 Chemotaxis methyl-accepting receptor AFA_05890 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AFA_05890 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AFA_05890 IPR003660 HAMP domain AFA_05890 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_05905 IPR006303 Flagellar biosynthesis protein FliR AFA_05905 IPR002010 Type III secretion system inner membrane R protein AFA_05910 IPR002191 Bacterial export protein family 3 AFA_05910 IPR006305 Flagellar biosynthesis protein FliQ AFA_05915 IPR005837 Flagellar transport protein FliP AFA_05915 IPR005838 Type III secretion system inner membrane P protein AFA_05920 IPR022781 Flagellar biosynthesis protein, FliO AFA_05925 IPR012826 Flagellar motor switch FliN AFA_05925 IPR036429 SpoA-like superfamily AFA_05925 IPR031576 Flagellar motor switch protein FliN, N-terminal AFA_05925 IPR001543 Surface presentation of antigen (SpoA) AFA_05925 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AFA_05930 IPR001543 Surface presentation of antigen (SpoA) AFA_05930 IPR036429 SpoA-like superfamily AFA_05930 IPR001689 Flagellar motor switch protein FliM AFA_05930 IPR028976 CheC-like superfamily AFA_05935 IPR005503 Flagellar basal body-associated protein FliL AFA_05945 IPR018006 Flagellar FliJ, proteobacteria AFA_05945 IPR012823 Flagellar export FliJ AFA_05950 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_05950 IPR005714 ATPase, type III secretion system, FliI/YscN AFA_05950 IPR020005 Flagellar export ATPase FliI, clade 1 AFA_05950 IPR032463 ATPase, type III secretion system, FliI AFA_05950 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AFA_05950 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AFA_05950 IPR040627 T3SS EscN ATPase, C-terminal AFA_05950 IPR003593 AAA+ ATPase domain AFA_05960 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AFA_05960 IPR000090 Flagellar motor switch protein FliG AFA_05960 IPR023087 Flagellar motor switch protein FliG, C-terminal AFA_05960 IPR011002 Flagellar motor switch protein FliG, alpha-helical AFA_05960 IPR032779 Flagellar motor switch protein FliG, middle domain AFA_05965 IPR000067 Flagellar M-ring protein FliF AFA_05965 IPR006182 Secretory protein YscJ/FliF AFA_05965 IPR013556 Flagellar M-ring C-terminal AFA_05970 IPR001624 Flagellar hook-basal body complex protein FliE AFA_05975 IPR006135 Type III secretion system substrate exporter AFA_05975 IPR029025 Type III secretion system substrate exporter, C-terminal AFA_05975 IPR006136 Flagellar biosynthetic protein FlhB AFA_05990 IPR036584 Flagellar protein FliS superfamily AFA_05990 IPR003713 Flagellar protein FliS AFA_05995 IPR010809 Flagellar hook-associated protein 2, C-terminal AFA_05995 IPR010810 Flagellin hook, IN motif AFA_05995 IPR040026 Flagellar hook-associated protein 2 AFA_05995 IPR003481 Flagellar hook-associated protein 2, N-terminal AFA_06000 IPR005186 FlaG protein AFA_06000 IPR035924 FlaG-like superfamily AFA_06005 IPR012845 RNA polymerase sigma factor, FliA/WhiG AFA_06005 IPR007630 RNA polymerase sigma-70 region 4 AFA_06005 IPR007624 RNA polymerase sigma-70 region 3 AFA_06005 IPR007627 RNA polymerase sigma-70 region 2 AFA_06005 IPR028617 RNA polymerase sigma factor FliA AFA_06005 IPR000943 RNA polymerase sigma-70 AFA_06005 IPR014284 RNA polymerase sigma-70 like domain AFA_06005 IPR013325 RNA polymerase sigma factor, region 2 AFA_06005 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_06015 IPR014981 Flagellin D3 AFA_06015 IPR001492 Flagellin AFA_06015 IPR001029 Flagellin, D0/D1 domain AFA_06050 IPR003593 AAA+ ATPase domain AFA_06050 IPR015854 ABC transporter, lipoprotein release, LolD AFA_06050 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_06050 IPR011924 Lipoprotein releasing system, ATP-binding protein AFA_06050 IPR017871 ABC transporter, conserved site AFA_06050 IPR003439 ABC transporter-like AFA_06060 IPR016187 C-type lectin fold AFA_06060 IPR042095 Sulfatase-modifying factor enzyme superfamily AFA_06060 IPR005532 Sulfatase-modifying factor enzyme AFA_06080 IPR007383 Protein of unknown function DUF445 AFA_06085 IPR000014 PAS domain AFA_06085 IPR013655 PAS fold-3 AFA_06085 IPR035965 PAS domain superfamily AFA_06085 IPR004090 Chemotaxis methyl-accepting receptor AFA_06085 IPR001610 PAC motif AFA_06085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_06085 IPR003660 HAMP domain AFA_06090 IPR003660 HAMP domain AFA_06090 IPR004090 Chemotaxis methyl-accepting receptor AFA_06090 IPR001610 PAC motif AFA_06090 IPR000014 PAS domain AFA_06090 IPR013655 PAS fold-3 AFA_06090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_06090 IPR035965 PAS domain superfamily AFA_06100 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AFA_06100 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AFA_06100 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AFA_06100 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AFA_06100 IPR004393 Nicotinate-nucleotide pyrophosphorylase AFA_06100 IPR013785 Aldolase-type TIM barrel AFA_06100 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AFA_06105 IPR005064 Bordetella uptake gene AFA_06105 IPR042100 Bordetella uptake gene, domain 1 AFA_06115 IPR003474 Gluconate transporter AFA_06125 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_06125 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_06125 IPR036291 NAD(P)-binding domain superfamily AFA_06125 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_06130 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_06130 IPR036390 Winged helix DNA-binding domain superfamily AFA_06130 IPR000847 Transcription regulator HTH, LysR AFA_06130 IPR005119 LysR, substrate-binding AFA_06135 IPR004624 PhnA protein AFA_06135 IPR013988 PhnA protein, C-terminal AFA_06135 IPR013987 PhnA protein, N-terminal AFA_06150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_06150 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_06150 IPR012910 TonB-dependent receptor, plug domain AFA_06155 IPR004852 Di-haem cytochrome c peroxidase AFA_06155 IPR036909 Cytochrome c-like domain superfamily AFA_06155 IPR009056 Cytochrome c-like domain AFA_06155 IPR022394 Methylamine utilisation protein, MauG AFA_06155 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase AFA_06160 IPR039697 Iron-type alcohol dehydrogenase-like AFA_06160 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AFA_06160 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AFA_06170 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_06170 IPR004681 TRAP transporter large membrane protein DctM AFA_06180 IPR010920 LSM domain superfamily AFA_06180 IPR006685 Mechanosensitive ion channel MscS AFA_06180 IPR011066 Mechanosensitive ion channel MscS, C-terminal AFA_06180 IPR006686 Mechanosensitive ion channel MscS, conserved site AFA_06180 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AFA_06180 IPR023408 Mechanosensitive ion channel MscS domain superfamily AFA_06185 IPR004841 Amino acid permease/ SLC12A domain AFA_06185 IPR004840 Amino acid permease, conserved site AFA_06190 IPR034294 Aquaporin transporter AFA_06190 IPR022357 Major intrinsic protein, conserved site AFA_06190 IPR023743 Aquaporin Z AFA_06190 IPR023271 Aquaporin-like AFA_06190 IPR000425 Major intrinsic protein AFA_06230 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_06230 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily AFA_06230 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding AFA_06230 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AFA_06230 IPR023753 FAD/NAD(P)-binding domain AFA_06230 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_06230 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AFA_06235 IPR036909 Cytochrome c-like domain superfamily AFA_06235 IPR009056 Cytochrome c-like domain AFA_06255 IPR002059 Cold-shock protein, DNA-binding AFA_06255 IPR012340 Nucleic acid-binding, OB-fold AFA_06255 IPR019844 Cold-shock (CSD) domain AFA_06255 IPR011129 Cold shock domain AFA_06255 IPR012156 Cold shock, CspA AFA_06280 IPR005543 PASTA domain AFA_06280 IPR017441 Protein kinase, ATP binding site AFA_06280 IPR000719 Protein kinase domain AFA_06280 IPR008271 Serine/threonine-protein kinase, active site AFA_06280 IPR011009 Protein kinase-like domain superfamily AFA_06305 IPR001525 C-5 cytosine methyltransferase AFA_06305 IPR018117 DNA methylase, C-5 cytosine-specific, active site AFA_06305 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site AFA_06305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_06350 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AFA_06350 IPR014142 P-type conjugative transfer protein TrbG AFA_06350 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily AFA_06350 IPR033645 VirB9/CagX/TrbG, C-terminal AFA_06355 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AFA_06355 IPR042217 Type IV secretion system, VirB10/TrbI AFA_06375 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_06375 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_06375 IPR003594 Histidine kinase/HSP90-like ATPase AFA_06375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_06375 IPR005467 Histidine kinase domain AFA_06375 IPR013727 Two-component sensor kinase, N-terminal AFA_06375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_06380 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_06380 IPR039420 Transcriptional regulatory protein WalR-like AFA_06380 IPR001789 Signal transduction response regulator, receiver domain AFA_06380 IPR016032 Signal transduction response regulator, C-terminal effector AFA_06380 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_06380 IPR011006 CheY-like superfamily AFA_06385 IPR023616 Cytochrome c oxidase-like, subunit I domain AFA_06385 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AFA_06385 IPR000883 Cytochrome c oxidase subunit I AFA_06385 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AFA_06385 IPR004677 Cytochrome c oxidase cbb3-type, subunit I AFA_06395 IPR036909 Cytochrome c-like domain superfamily AFA_06395 IPR024167 Cytochrome c4-like AFA_06395 IPR009056 Cytochrome c-like domain AFA_06400 IPR009056 Cytochrome c-like domain AFA_06400 IPR036909 Cytochrome c-like domain superfamily AFA_06405 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AFA_06405 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase AFA_06405 IPR029052 Metallo-dependent phosphatase-like AFA_06410 IPR012910 TonB-dependent receptor, plug domain AFA_06410 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_06410 IPR010105 TonB-dependent siderophore receptor AFA_06410 IPR039423 TonB-dependent receptor-like AFA_06410 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_06410 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_06410 IPR010916 TonB box, conserved site AFA_06435 IPR002771 Multiple antibiotic resistance (MarC)-related AFA_06450 IPR005694 Efflux pump membrane protein AFA_06450 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AFA_06450 IPR030196 Multidrug resistance protein MdtN AFA_06455 IPR010020 Integral membrane protein, YccS/YhfK AFA_06455 IPR032692 Integral membrane protein YccS, N-terminal AFA_06455 IPR010019 Integral membrane protein, YccS AFA_06460 IPR006043 Xanthine/uracil/vitamin C permease AFA_06465 IPR023214 HAD superfamily AFA_06465 IPR036412 HAD-like superfamily AFA_06465 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AFA_06480 IPR003782 Copper chaperone SCO1/SenC AFA_06480 IPR036249 Thioredoxin-like superfamily AFA_06490 IPR002932 Glutamate synthase domain AFA_06490 IPR013785 Aldolase-type TIM barrel AFA_06490 IPR027283 Glutamate synthase large subunit-like protein, bacteria AFA_06490 IPR024188 Glutamate synthase large subunit-like protein AFA_06500 IPR000835 MarR-type HTH domain AFA_06500 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_06500 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_06500 IPR036390 Winged helix DNA-binding domain superfamily AFA_06505 IPR001453 MoaB/Mog domain AFA_06505 IPR008136 CinA, C-terminal AFA_06505 IPR041424 CinA, KH domain AFA_06505 IPR036425 MoaB/Mog-like domain superfamily AFA_06505 IPR008135 Competence-induced protein CinA AFA_06505 IPR036653 CinA-like, C-terminal AFA_06510 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AFA_06510 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AFA_06510 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AFA_06510 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AFA_06510 IPR036008 Aconitase, iron-sulfur domain AFA_06510 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AFA_06510 IPR018136 Aconitase family, 4Fe-4S cluster binding site AFA_06520 IPR007400 PrpF protein AFA_06535 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_06535 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit AFA_06535 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_06535 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AFA_06535 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AFA_06535 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AFA_06540 IPR032710 NTF2-like domain superfamily AFA_06540 IPR000391 Ring-hydroxylating dioxygenase beta subunit AFA_06540 IPR017641 Benzoate 1,2-dioxygenase, small subunit AFA_06550 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_06550 IPR036291 NAD(P)-binding domain superfamily AFA_06560 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_06560 IPR016161 Aldehyde/histidinol dehydrogenase AFA_06560 IPR015590 Aldehyde dehydrogenase domain AFA_06560 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_06565 IPR036291 NAD(P)-binding domain superfamily AFA_06565 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_06565 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_06565 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_06570 IPR000873 AMP-dependent synthetase/ligase AFA_06570 IPR025110 AMP-binding enzyme, C-terminal domain AFA_06570 IPR020845 AMP-binding, conserved site AFA_06570 IPR042099 AMP-dependent synthetase-like superfamily AFA_06575 IPR003779 Carboxymuconolactone decarboxylase-like AFA_06575 IPR004675 Alkylhydroperoxidase AhpD core AFA_06575 IPR029032 AhpD-like AFA_06585 IPR006686 Mechanosensitive ion channel MscS, conserved site AFA_06585 IPR024393 Mechanosensitive ion channel MscS, porin domain AFA_06585 IPR023408 Mechanosensitive ion channel MscS domain superfamily AFA_06585 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AFA_06585 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AFA_06585 IPR006685 Mechanosensitive ion channel MscS AFA_06585 IPR010920 LSM domain superfamily AFA_06585 IPR011066 Mechanosensitive ion channel MscS, C-terminal AFA_06590 IPR024393 Mechanosensitive ion channel MscS, porin domain AFA_06590 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AFA_06590 IPR023408 Mechanosensitive ion channel MscS domain superfamily AFA_06590 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AFA_06590 IPR006686 Mechanosensitive ion channel MscS, conserved site AFA_06590 IPR011066 Mechanosensitive ion channel MscS, C-terminal AFA_06590 IPR006685 Mechanosensitive ion channel MscS AFA_06590 IPR010920 LSM domain superfamily AFA_06595 IPR020846 Major facilitator superfamily domain AFA_06595 IPR015041 Osmosensory transporter coiled coil AFA_06595 IPR005829 Sugar transporter, conserved site AFA_06595 IPR005828 Major facilitator, sugar transporter-like AFA_06595 IPR036292 Proline/betaine transporter ProP, C-terminal AFA_06595 IPR036259 MFS transporter superfamily AFA_06595 IPR004736 MFS transporter, metabolite:H symporter AFA_06610 IPR001387 Cro/C1-type helix-turn-helix domain AFA_06610 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AFA_06615 IPR011006 CheY-like superfamily AFA_06615 IPR003607 HD/PDEase domain AFA_06615 IPR037522 HD-GYP domain AFA_06615 IPR001789 Signal transduction response regulator, receiver domain AFA_06620 IPR011006 CheY-like superfamily AFA_06620 IPR005467 Histidine kinase domain AFA_06620 IPR003594 Histidine kinase/HSP90-like ATPase AFA_06620 IPR036641 HPT domain superfamily AFA_06620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_06620 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AFA_06620 IPR001789 Signal transduction response regulator, receiver domain AFA_06620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_06620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_06620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_06625 IPR038076 MgtE, N-terminal domain superfamily AFA_06625 IPR006667 SLC41 divalent cation transporters, integral membrane domain AFA_06625 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AFA_06625 IPR038048 Magnesium transporter MgtE, transmembrane domain AFA_06625 IPR006669 Magnesium transporter MgtE AFA_06625 IPR006668 Magnesium transporter, MgtE intracellular domain AFA_06625 IPR000644 CBS domain AFA_06635 IPR004670 Na+/H+ antiporter NhaA AFA_06635 IPR023171 Na/H antiporter domain superfamily AFA_06640 IPR003732 D-aminoacyl-tRNA deacylase DTD AFA_06640 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AFA_06645 IPR000390 Small multidrug resistance protein family AFA_06655 IPR000182 GNAT domain AFA_06655 IPR016181 Acyl-CoA N-acyltransferase AFA_06660 IPR032710 NTF2-like domain superfamily AFA_06660 IPR023006 Uncharacterised protein family UPF0225 AFA_06665 IPR001915 Peptidase M48 AFA_06695 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site AFA_06695 IPR001091 Restriction/modification DNA-methylase AFA_06695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_06695 IPR002941 DNA methylase N-4/N-6 AFA_06705 IPR007476 Putative exonuclease, RdgC AFA_06985 IPR002196 Glycoside hydrolase, family 24 AFA_06985 IPR034690 Endolysin T4 type AFA_06985 IPR023346 Lysozyme-like domain superfamily AFA_07005 IPR036590 SOS response associated peptidase-like AFA_07005 IPR003738 SOS response associated peptidase (SRAP) AFA_07015 IPR002104 Integrase, catalytic domain AFA_07015 IPR011010 DNA breaking-rejoining enzyme, catalytic core AFA_07015 IPR010998 Integrase/recombinase, N-terminal AFA_07015 IPR013762 Integrase-like, catalytic domain superfamily AFA_07040 IPR006199 LexA repressor, DNA-binding domain AFA_07040 IPR006200 Transcription regulator LexA AFA_07040 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_07040 IPR006197 Peptidase S24, LexA-like AFA_07040 IPR039418 LexA-like AFA_07040 IPR015927 Peptidase S24/S26A/S26B/S26C AFA_07040 IPR036390 Winged helix DNA-binding domain superfamily AFA_07040 IPR036286 LexA/Signal peptidase-like superfamily AFA_07155 IPR002196 Glycoside hydrolase, family 24 AFA_07155 IPR034690 Endolysin T4 type AFA_07155 IPR023346 Lysozyme-like domain superfamily AFA_07210 IPR000160 GGDEF domain AFA_07210 IPR029787 Nucleotide cyclase AFA_07210 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AFA_07225 IPR011991 ArsR-like helix-turn-helix domain AFA_07225 IPR000485 AsnC-type HTH domain AFA_07225 IPR011008 Dimeric alpha-beta barrel AFA_07225 IPR019888 Transcription regulator AsnC-type AFA_07225 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AFA_07225 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AFA_07225 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_07225 IPR036390 Winged helix DNA-binding domain superfamily AFA_07230 IPR006233 Cystathionine beta-lyase, bacterial AFA_07230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_07230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_07230 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AFA_07230 IPR015424 Pyridoxal phosphate-dependent transferase AFA_07240 IPR003561 Mutator MutT AFA_07240 IPR020476 NUDIX hydrolase AFA_07240 IPR015797 NUDIX hydrolase-like domain superfamily AFA_07240 IPR020084 NUDIX hydrolase, conserved site AFA_07240 IPR000086 NUDIX hydrolase domain AFA_07245 IPR007401 Protein of unknown function DUF454 AFA_07255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_07255 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail AFA_07255 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AFA_07255 IPR018223 Argininosuccinate synthase, conserved site AFA_07255 IPR001518 Argininosuccinate synthase AFA_07255 IPR023437 Argininosuccinate synthase, type 2 subfamily AFA_07260 IPR042283 GpdQ, catalytic alpha/beta sandwich domain AFA_07260 IPR042281 GpdQ, beta-strand dimerisation domain AFA_07260 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AFA_07260 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA AFA_07265 IPR024765 TOBE-like domain AFA_07265 IPR005666 Sulphate transport system permease protein 1 AFA_07265 IPR003439 ABC transporter-like AFA_07265 IPR017871 ABC transporter, conserved site AFA_07265 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal AFA_07265 IPR008995 Molybdate/tungstate binding, C-terminal AFA_07265 IPR003593 AAA+ ATPase domain AFA_07265 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07270 IPR035906 MetI-like superfamily AFA_07270 IPR006469 NifC-like ABC-type porter AFA_07270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_07270 IPR011867 Molybdate ABC transporter, permease protein AFA_07280 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter AFA_07280 IPR006059 Bacterial extracellular solute-binding protein AFA_07285 IPR000843 LacI-type HTH domain AFA_07285 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AFA_07285 IPR006377 Catabolite control protein A AFA_07285 IPR028082 Periplasmic binding protein-like I AFA_07290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_07290 IPR022310 NAD/GMP synthase AFA_07290 IPR025777 GMP synthetase ATP pyrophosphatase domain AFA_07290 IPR017926 Glutamine amidotransferase AFA_07290 IPR004739 GMP synthase, glutamine amidotransferase AFA_07290 IPR001674 GMP synthase, C-terminal AFA_07290 IPR029062 Class I glutamine amidotransferase-like AFA_07290 IPR022955 GMP synthase AFA_07300 IPR004623 Potassium-transporting ATPase A chain AFA_07305 IPR003820 Potassium-transporting ATPase C chain AFA_07310 IPR023299 P-type ATPase, cytoplasmic domain N AFA_07310 IPR018303 P-type ATPase, phosphorylation site AFA_07310 IPR023298 P-type ATPase, transmembrane domain superfamily AFA_07310 IPR008250 P-type ATPase, A domain superfamily AFA_07310 IPR036412 HAD-like superfamily AFA_07310 IPR023214 HAD superfamily AFA_07310 IPR006391 P-type ATPase, B chain, subfamily IA AFA_07310 IPR001757 P-type ATPase AFA_07315 IPR005467 Histidine kinase domain AFA_07315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_07315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_07315 IPR038318 KdpD, transmembrane domain superfamily AFA_07315 IPR025201 Sensor protein KdpD, transmembrane domain AFA_07315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_07315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_07315 IPR003594 Histidine kinase/HSP90-like ATPase AFA_07315 IPR003018 GAF domain AFA_07315 IPR029016 GAF-like domain superfamily AFA_07315 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal AFA_07320 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_07320 IPR039420 Transcriptional regulatory protein WalR-like AFA_07320 IPR001789 Signal transduction response regulator, receiver domain AFA_07320 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_07320 IPR011006 CheY-like superfamily AFA_07325 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AFA_07325 IPR024904 Ornithine carbamoyltransferase AFA_07325 IPR002292 Ornithine/putrescine carbamoyltransferase AFA_07325 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AFA_07325 IPR006130 Aspartate/ornithine carbamoyltransferase AFA_07325 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AFA_07335 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFA_07335 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AFA_07335 IPR036291 NAD(P)-binding domain superfamily AFA_07340 IPR036510 Ribosomal protein S20 superfamily AFA_07340 IPR002583 Ribosomal protein S20 AFA_07345 IPR004268 Peptidoglycan biosynthesis protein MurJ AFA_07350 IPR036291 NAD(P)-binding domain superfamily AFA_07350 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_07350 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_07355 IPR033690 Adenylate kinase, conserved site AFA_07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07355 IPR007862 Adenylate kinase, active site lid domain AFA_07355 IPR006259 Adenylate kinase subfamily AFA_07355 IPR000850 Adenylate kinase/UMP-CMP kinase AFA_07360 IPR029044 Nucleotide-diphospho-sugar transferases AFA_07360 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AFA_07360 IPR003329 Acylneuraminate cytidylyltransferase AFA_07365 IPR005651 Trm112-like AFA_07370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07370 IPR003758 Tetraacyldisaccharide 4'-kinase AFA_07375 IPR003400 Biopolymer transport protein ExbD/TolR AFA_07380 IPR002898 MotA/TolQ/ExbB proton channel AFA_07385 IPR020579 Exonuclease VII, large subunit, C-terminal AFA_07385 IPR003753 Exonuclease VII, large subunit AFA_07385 IPR025824 OB-fold nucleic acid binding domain AFA_07390 IPR019833 Manganese/iron superoxide dismutase, binding site AFA_07390 IPR019832 Manganese/iron superoxide dismutase, C-terminal AFA_07390 IPR019831 Manganese/iron superoxide dismutase, N-terminal AFA_07390 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AFA_07390 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AFA_07390 IPR001189 Manganese/iron superoxide dismutase AFA_07395 IPR002024 Bacterioferritin AFA_07395 IPR012347 Ferritin-like AFA_07395 IPR009040 Ferritin-like diiron domain AFA_07395 IPR008331 Ferritin/DPS protein domain AFA_07395 IPR009078 Ferritin-like superfamily AFA_07400 IPR020616 Thiolase, N-terminal AFA_07400 IPR020617 Thiolase, C-terminal AFA_07400 IPR012793 Beta-ketoadipyl CoA thiolase AFA_07400 IPR002155 Thiolase AFA_07400 IPR016039 Thiolase-like AFA_07400 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_07400 IPR020610 Thiolase, active site AFA_07400 IPR020613 Thiolase, conserved site AFA_07410 IPR012340 Nucleic acid-binding, OB-fold AFA_07410 IPR002059 Cold-shock protein, DNA-binding AFA_07410 IPR012156 Cold shock, CspA AFA_07410 IPR019844 Cold-shock (CSD) domain AFA_07410 IPR011129 Cold shock domain AFA_07415 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AFA_07415 IPR003769 Adaptor protein ClpS, core AFA_07415 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AFA_07420 IPR003593 AAA+ ATPase domain AFA_07420 IPR003959 ATPase, AAA-type, core AFA_07420 IPR019489 Clp ATPase, C-terminal AFA_07420 IPR036628 Clp, N-terminal domain superfamily AFA_07420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07420 IPR004176 Clp, N-terminal AFA_07420 IPR001270 ClpA/B family AFA_07420 IPR041546 ClpA/ClpB, AAA lid domain AFA_07420 IPR028299 ClpA/B, conserved site 2 AFA_07420 IPR018368 ClpA/B, conserved site 1 AFA_07420 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA AFA_07425 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AFA_07425 IPR007498 Intermembrane transport protein PqiA-like AFA_07430 IPR003399 Mce/MlaD AFA_07440 IPR024089 Proline dehydrogenase PutA, domain I/II AFA_07440 IPR010985 Ribbon-helix-helix AFA_07440 IPR002872 Proline dehydrogenase domain AFA_07440 IPR024082 Proline dehydrogenase PutA, domain II AFA_07440 IPR024090 Proline dehydrogenase PutA, domain I AFA_07440 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_07440 IPR029041 FAD-linked oxidoreductase-like AFA_07440 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 AFA_07440 IPR025703 Bifunctional protein PutA AFA_07440 IPR013321 Arc-type ribbon-helix-helix AFA_07440 IPR015590 Aldehyde dehydrogenase domain AFA_07440 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_07440 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_07440 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_07440 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain AFA_07440 IPR016161 Aldehyde/histidinol dehydrogenase AFA_07445 IPR028081 Leucine-binding protein domain AFA_07445 IPR000709 Leu/Ile/Val-binding protein AFA_07445 IPR028082 Periplasmic binding protein-like I AFA_07450 IPR001851 ABC transporter, permease AFA_07455 IPR001851 ABC transporter, permease AFA_07455 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AFA_07460 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07460 IPR017871 ABC transporter, conserved site AFA_07460 IPR003439 ABC transporter-like AFA_07460 IPR003593 AAA+ ATPase domain AFA_07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07465 IPR017871 ABC transporter, conserved site AFA_07465 IPR003593 AAA+ ATPase domain AFA_07465 IPR003439 ABC transporter-like AFA_07465 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_07495 IPR016909 Ribosomal RNA large subunit methyltransferase F AFA_07495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_07495 IPR010286 METTL16/RlmF family AFA_07500 IPR029054 dUTPase-like AFA_07500 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AFA_07500 IPR033704 dUTPase, trimeric AFA_07500 IPR036157 dUTPase-like superfamily AFA_07505 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AFA_07505 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AFA_07505 IPR003382 Flavoprotein AFA_07505 IPR035929 CoaB-like superfamily AFA_07505 IPR036551 Flavin prenyltransferase-like AFA_07510 IPR001872 Peptidase A8, signal peptidase II AFA_07515 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AFA_07515 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AFA_07515 IPR023585 Isoleucine-tRNA ligase, type 1 AFA_07515 IPR002301 Isoleucine-tRNA ligase AFA_07515 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain AFA_07515 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AFA_07515 IPR002300 Aminoacyl-tRNA synthetase, class Ia AFA_07515 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_07515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_07515 IPR010663 Zinc finger, FPG/IleRS-type AFA_07520 IPR023468 Riboflavin kinase AFA_07520 IPR002606 Riboflavin kinase, bacterial AFA_07520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_07520 IPR015864 FAD synthetase AFA_07520 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AFA_07520 IPR023465 Riboflavin kinase domain superfamily AFA_07525 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AFA_07525 IPR004607 Phosphoribosylglycinamide formyltransferase AFA_07525 IPR036477 Formyl transferase, N-terminal domain superfamily AFA_07525 IPR002376 Formyl transferase, N-terminal AFA_07530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_07530 IPR004573 rRNA small subunit methyltransferase B AFA_07530 IPR023267 RNA (C5-cytosine) methyltransferase AFA_07530 IPR006027 NusB/RsmB/TIM44 AFA_07530 IPR035926 NusB-like superfamily AFA_07530 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AFA_07530 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AFA_07540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07540 IPR034739 UvrD/AddA helicase, N-terminal AFA_07540 IPR013986 DExx box DNA helicase domain superfamily AFA_07540 IPR005753 DNA helicase, ATP-dependent, UvrD type AFA_07540 IPR014016 UvrD-like helicase, ATP-binding domain AFA_07540 IPR014017 UvrD-like DNA helicase, C-terminal AFA_07540 IPR000212 DNA helicase, UvrD/REP type AFA_07565 IPR032781 ABC-transporter extension domain AFA_07565 IPR003439 ABC transporter-like AFA_07565 IPR017871 ABC transporter, conserved site AFA_07565 IPR003593 AAA+ ATPase domain AFA_07565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07570 IPR004556 Methyltransferase HemK-like AFA_07570 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase AFA_07570 IPR007848 Methyltransferase small domain AFA_07570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_07570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AFA_07575 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AFA_07575 IPR011650 Peptidase M20, dimerisation domain AFA_07575 IPR002933 Peptidase M20 AFA_07575 IPR036264 Bacterial exopeptidase dimerisation domain AFA_07580 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family AFA_07580 IPR001451 Hexapeptide repeat AFA_07580 IPR018357 Hexapeptide transferase, conserved site AFA_07580 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 AFA_07580 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily AFA_07580 IPR011004 Trimeric LpxA-like superfamily AFA_07590 IPR003313 AraC-type arabinose-binding/dimerisation domain AFA_07590 IPR009057 Homeobox-like domain superfamily AFA_07590 IPR011051 RmlC-like cupin domain superfamily AFA_07590 IPR014710 RmlC-like jelly roll fold AFA_07590 IPR018062 HTH domain AraC-type, conserved site AFA_07590 IPR018060 DNA binding HTH domain, AraC-type AFA_07600 IPR004680 Citrate transporter-like domain AFA_07600 IPR031312 Sodium/sulphate symporter, conserved site AFA_07600 IPR006037 Regulator of K+ conductance, C-terminal AFA_07600 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AFA_07645 IPR009061 Putative DNA-binding domain superfamily AFA_07645 IPR000551 MerR-type HTH domain AFA_07645 IPR010211 Redox-sensitive transcriptional activator SoxR AFA_07645 IPR015358 Transcription regulator MerR, DNA binding AFA_07650 IPR020846 Major facilitator superfamily domain AFA_07650 IPR011701 Major facilitator superfamily AFA_07650 IPR036259 MFS transporter superfamily AFA_07665 IPR023606 CoA-transferase family III domain superfamily AFA_07665 IPR003673 CoA-transferase family III AFA_07670 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AFA_07670 IPR005215 Trigger factor AFA_07670 IPR008880 Trigger factor, C-terminal AFA_07670 IPR037041 Trigger factor, C-terminal domain superfamily AFA_07670 IPR036611 Trigger factor ribosome-binding domain superfamily AFA_07670 IPR027304 Trigger factor/SurA domain superfamily AFA_07670 IPR008881 Trigger factor, ribosome-binding, bacterial AFA_07675 IPR001907 ATP-dependent Clp protease proteolytic subunit AFA_07675 IPR033135 ClpP, histidine active site AFA_07675 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AFA_07675 IPR029045 ClpP/crotonase-like domain superfamily AFA_07680 IPR010603 Zinc finger, ClpX C4-type AFA_07680 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07680 IPR004487 Clp protease, ATP-binding subunit ClpX AFA_07680 IPR019489 Clp ATPase, C-terminal AFA_07680 IPR003959 ATPase, AAA-type, core AFA_07680 IPR003593 AAA+ ATPase domain AFA_07680 IPR038366 Zinc finger, ClpX C4-type superfamily AFA_07685 IPR003111 Lon, substrate-binding domain AFA_07685 IPR003593 AAA+ ATPase domain AFA_07685 IPR003959 ATPase, AAA-type, core AFA_07685 IPR027543 Lon protease, bacterial AFA_07685 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07685 IPR008269 Peptidase S16, Lon proteolytic domain AFA_07685 IPR008268 Peptidase S16, active site AFA_07685 IPR004815 Lon protease, bacterial/eukaryotic-type AFA_07685 IPR015947 PUA-like superfamily AFA_07685 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_07685 IPR027065 Lon protease AFA_07685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_07690 IPR006197 Peptidase S24, LexA-like AFA_07690 IPR006199 LexA repressor, DNA-binding domain AFA_07690 IPR036286 LexA/Signal peptidase-like superfamily AFA_07690 IPR039418 LexA-like AFA_07690 IPR006200 Transcription regulator LexA AFA_07690 IPR036390 Winged helix DNA-binding domain superfamily AFA_07690 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_07690 IPR015927 Peptidase S24/S26A/S26B/S26C AFA_07695 IPR016181 Acyl-CoA N-acyltransferase AFA_07695 IPR000182 GNAT domain AFA_07700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_07700 IPR004839 Aminotransferase, class I/classII AFA_07700 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AFA_07700 IPR000796 Aspartate/other aminotransferase AFA_07700 IPR015424 Pyridoxal phosphate-dependent transferase AFA_07700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_07705 IPR024759 UvrB, YAD/RRR-motif-containing domain AFA_07705 IPR041471 UvrB, interaction domain AFA_07705 IPR006935 Helicase/UvrB, N-terminal AFA_07705 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_07705 IPR004807 UvrABC system, subunit B AFA_07705 IPR001650 Helicase, C-terminal AFA_07705 IPR001943 UVR domain AFA_07705 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07705 IPR036876 UVR domain superfamily AFA_07710 IPR023485 Phosphotyrosine protein phosphatase I AFA_07710 IPR036196 Phosphotyrosine protein phosphatase I superfamily AFA_07710 IPR017867 Protein-tyrosine phosphatase, low molecular weight AFA_07715 IPR036390 Winged helix DNA-binding domain superfamily AFA_07715 IPR000944 Transcription regulator Rrf2-type AFA_07715 IPR030489 Transcription regulator Rrf2-type, conserved site AFA_07715 IPR010242 Transcription factor HTH, IscR AFA_07715 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_07720 IPR015424 Pyridoxal phosphate-dependent transferase AFA_07720 IPR000192 Aminotransferase class V domain AFA_07720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_07720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_07720 IPR010240 Cysteine desulfurase IscS AFA_07720 IPR016454 Cysteine desulfurase AFA_07720 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AFA_07725 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AFA_07725 IPR011339 ISC system FeS cluster assembly, IscU scaffold AFA_07730 IPR017870 FeS cluster insertion, C-terminal, conserved site AFA_07730 IPR000361 FeS cluster biogenesis AFA_07730 IPR011302 Iron-binding protein IscA, proteobacteria AFA_07730 IPR016092 FeS cluster insertion protein AFA_07730 IPR035903 HesB-like domain superfamily AFA_07735 IPR036914 Methylglyoxal synthase-like domain superfamily AFA_07735 IPR011607 Methylglyoxal synthase-like domain AFA_07735 IPR004363 Methylglyoxal synthase AFA_07740 IPR042100 Bordetella uptake gene, domain 1 AFA_07740 IPR005064 Bordetella uptake gene AFA_07745 IPR006195 Aminoacyl-tRNA synthetase, class II AFA_07745 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AFA_07745 IPR012340 Nucleic acid-binding, OB-fold AFA_07745 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AFA_07745 IPR002313 Lysine-tRNA ligase, class II AFA_07745 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AFA_07750 IPR036291 NAD(P)-binding domain superfamily AFA_07750 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_07750 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_07760 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AFA_07760 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AFA_07760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_07760 IPR003660 HAMP domain AFA_07760 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AFA_07760 IPR004090 Chemotaxis methyl-accepting receptor AFA_07765 IPR006196 RNA-binding domain, S1, IF1 type AFA_07765 IPR004368 Translation initiation factor IF-1 AFA_07765 IPR012340 Nucleic acid-binding, OB-fold AFA_07770 IPR000620 EamA domain AFA_07775 IPR038770 Sodium/solute symporter superfamily AFA_07775 IPR004710 Bile acid:sodium symporter AFA_07775 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AFA_07785 IPR003156 DHHA1 domain AFA_07785 IPR038763 DHH phosphoesterase superfamily AFA_07785 IPR001667 DDH domain AFA_07785 IPR004610 Bacterial RecJ exonuclease AFA_07785 IPR041122 RecJ, OB domain AFA_07795 IPR003838 ABC transporter permease protein domain AFA_07795 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E AFA_07795 IPR025857 MacB-like periplasmic core domain AFA_07800 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07800 IPR015854 ABC transporter, lipoprotein release, LolD AFA_07800 IPR017871 ABC transporter, conserved site AFA_07800 IPR003439 ABC transporter-like AFA_07800 IPR003593 AAA+ ATPase domain AFA_07805 IPR001130 TatD family AFA_07805 IPR032466 Metal-dependent hydrolase AFA_07805 IPR018228 Deoxyribonuclease, TatD-related, conserved site AFA_07810 IPR035681 ComA-like, MBL domain AFA_07810 IPR004477 ComEC/Rec2-related protein AFA_07810 IPR004797 Competence protein ComEC/Rec2 AFA_07810 IPR001279 Metallo-beta-lactamase AFA_07810 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AFA_07815 IPR023489 Haloalkane dehalogenase, subfamily 1 AFA_07815 IPR000639 Epoxide hydrolase-like AFA_07815 IPR000073 Alpha/beta hydrolase fold-1 AFA_07815 IPR029058 Alpha/Beta hydrolase fold AFA_07820 IPR003141 Polymerase/histidinol phosphatase, N-terminal AFA_07820 IPR016195 Polymerase/histidinol phosphatase-like AFA_07820 IPR004013 PHP domain AFA_07825 IPR006358 Transcription elongation factor GreB AFA_07825 IPR023459 Transcription elongation factor GreA/GreB family AFA_07825 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AFA_07825 IPR028624 Transcription elongation factor GreA/GreB AFA_07825 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AFA_07825 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AFA_07825 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AFA_07825 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AFA_07830 IPR010918 PurM-like, C-terminal domain AFA_07830 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AFA_07830 IPR036676 PurM-like, C-terminal domain superfamily AFA_07830 IPR036921 PurM-like, N-terminal domain superfamily AFA_07830 IPR010073 Phosphoribosylformylglycinamidine synthase PurL AFA_07830 IPR017926 Glutamine amidotransferase AFA_07830 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal AFA_07830 IPR029062 Class I glutamine amidotransferase-like AFA_07830 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily AFA_07835 IPR013785 Aldolase-type TIM barrel AFA_07835 IPR001093 IMP dehydrogenase/GMP reductase AFA_07835 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AFA_07835 IPR005990 Inosine-5'-monophosphate dehydrogenase AFA_07835 IPR000644 CBS domain AFA_07845 IPR029062 Class I glutamine amidotransferase-like AFA_07845 IPR004739 GMP synthase, glutamine amidotransferase AFA_07845 IPR022955 GMP synthase AFA_07845 IPR001674 GMP synthase, C-terminal AFA_07845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_07845 IPR022310 NAD/GMP synthase AFA_07845 IPR017926 Glutamine amidotransferase AFA_07845 IPR025777 GMP synthetase ATP pyrophosphatase domain AFA_07860 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_07860 IPR038724 Regulatory protein RepA AFA_07870 IPR013321 Arc-type ribbon-helix-helix AFA_07870 IPR010985 Ribbon-helix-helix AFA_07905 IPR038770 Sodium/solute symporter superfamily AFA_07905 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AFA_07905 IPR004706 Arsenical-resistance protein Acr3 AFA_07915 IPR029039 Flavoprotein-like superfamily AFA_07915 IPR014063 Arsenate resistance ArsH AFA_07915 IPR005025 NADPH-dependent FMN reductase-like AFA_07925 IPR006120 Resolvase, HTH domain AFA_07925 IPR006119 Resolvase, N-terminal catalytic domain AFA_07925 IPR006118 Recombinase, conserved site AFA_07925 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily AFA_07945 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AFA_07945 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AFA_07945 IPR006352 Phosphoglucosamine mutase, bacterial type AFA_07945 IPR005841 Alpha-D-phosphohexomutase superfamily AFA_07945 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AFA_07945 IPR005843 Alpha-D-phosphohexomutase, C-terminal AFA_07945 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AFA_07945 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AFA_07950 IPR000489 Pterin-binding domain AFA_07950 IPR006390 Dihydropteroate synthase AFA_07950 IPR011005 Dihydropteroate synthase-like AFA_07965 IPR005119 LysR, substrate-binding AFA_07965 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_07965 IPR036390 Winged helix DNA-binding domain superfamily AFA_07965 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain AFA_07965 IPR000847 Transcription regulator HTH, LysR AFA_07970 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AFA_07970 IPR006276 Cobalamin-independent methionine synthase AFA_07970 IPR038071 UROD/MetE-like superfamily AFA_07970 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AFA_07985 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AFA_07985 IPR038071 UROD/MetE-like superfamily AFA_07995 IPR006089 Acyl-CoA dehydrogenase, conserved site AFA_07995 IPR041504 Adaptive response protein AidB, N-terminal AFA_07995 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_07995 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_07995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_07995 IPR034184 Putative acyl-CoA dehydrogenase AidB AFA_07995 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_08005 IPR026881 WYL domain AFA_08005 IPR028349 Protein PafC AFA_08005 IPR001034 DeoR-type HTH domain AFA_08005 IPR036390 Winged helix DNA-binding domain superfamily AFA_08005 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08005 IPR013196 Helix-turn-helix, type 11 AFA_08010 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AFA_08010 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AFA_08010 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08015 IPR022838 GTP cyclohydrolase FolE2 AFA_08015 IPR003801 GTP cyclohydrolase FolE2/MptA AFA_08020 IPR002696 Putative membrane protein insertion efficiency factor AFA_08030 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_08030 IPR032466 Metal-dependent hydrolase AFA_08030 IPR004722 Dihydroorotase AFA_08030 IPR006680 Amidohydrolase-related AFA_08030 IPR002195 Dihydroorotase, conserved site AFA_08035 IPR002481 Ferric-uptake regulator AFA_08035 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08035 IPR036390 Winged helix DNA-binding domain superfamily AFA_08040 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AFA_08040 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AFA_08040 IPR026660 Phosphoribosyl-AMP cyclohydrolase AFA_08045 IPR029056 Ribokinase-like AFA_08045 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AFA_08045 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AFA_08050 IPR020084 NUDIX hydrolase, conserved site AFA_08050 IPR015797 NUDIX hydrolase-like domain superfamily AFA_08050 IPR022927 RNA pyrophosphohydrolase RppH AFA_08050 IPR000086 NUDIX hydrolase domain AFA_08055 IPR037479 Tautomerase, MSAD family AFA_08055 IPR014347 Tautomerase/MIF superfamily AFA_08060 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_08060 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_08060 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_08060 IPR000971 Globin AFA_08060 IPR009050 Globin-like superfamily AFA_08060 IPR012292 Globin/Protoglobin AFA_08060 IPR023950 Flavohemoprotein AFA_08060 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_08060 IPR017938 Riboflavin synthase-like beta-barrel AFA_08070 IPR013785 Aldolase-type TIM barrel AFA_08070 IPR004136 Nitronate monooxygenase AFA_08100 IPR036249 Thioredoxin-like superfamily AFA_08100 IPR004045 Glutathione S-transferase, N-terminal AFA_08100 IPR040079 Glutathione Transferase family AFA_08100 IPR010987 Glutathione S-transferase, C-terminal-like AFA_08100 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_08105 IPR036390 Winged helix DNA-binding domain superfamily AFA_08105 IPR000847 Transcription regulator HTH, LysR AFA_08105 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08105 IPR005119 LysR, substrate-binding AFA_08125 IPR036249 Thioredoxin-like superfamily AFA_08125 IPR040079 Glutathione Transferase family AFA_08125 IPR004045 Glutathione S-transferase, N-terminal AFA_08125 IPR010987 Glutathione S-transferase, C-terminal-like AFA_08125 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_08130 IPR029045 ClpP/crotonase-like domain superfamily AFA_08130 IPR001907 ATP-dependent Clp protease proteolytic subunit AFA_08130 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AFA_08130 IPR033135 ClpP, histidine active site AFA_08150 IPR018062 HTH domain AraC-type, conserved site AFA_08150 IPR009057 Homeobox-like domain superfamily AFA_08150 IPR018060 DNA binding HTH domain, AraC-type AFA_08155 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08155 IPR001077 O-methyltransferase domain AFA_08155 IPR016461 O-methyltransferase COMT-type AFA_08155 IPR036390 Winged helix DNA-binding domain superfamily AFA_08155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_08165 IPR001763 Rhodanese-like domain AFA_08165 IPR036873 Rhodanese-like domain superfamily AFA_08165 IPR000594 THIF-type NAD/FAD binding fold AFA_08165 IPR035985 Ubiquitin-activating enzyme AFA_08170 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain AFA_08170 IPR028090 JAB domain, prokaryotic AFA_08170 IPR037518 MPN domain AFA_08175 IPR003749 Sulfur carrier ThiS/MoaD-like AFA_08175 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AFA_08175 IPR012675 Beta-grasp domain superfamily AFA_08180 IPR023606 CoA-transferase family III domain superfamily AFA_08180 IPR003673 CoA-transferase family III AFA_08185 IPR000873 AMP-dependent synthetase/ligase AFA_08185 IPR020845 AMP-binding, conserved site AFA_08185 IPR025110 AMP-binding enzyme, C-terminal domain AFA_08190 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_08190 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_08190 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_08190 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_08190 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_08190 IPR006089 Acyl-CoA dehydrogenase, conserved site AFA_08190 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_08210 IPR003779 Carboxymuconolactone decarboxylase-like AFA_08210 IPR004675 Alkylhydroperoxidase AhpD core AFA_08210 IPR029032 AhpD-like AFA_08215 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08215 IPR001845 HTH ArsR-type DNA-binding domain AFA_08215 IPR036390 Winged helix DNA-binding domain superfamily AFA_08215 IPR011991 ArsR-like helix-turn-helix domain AFA_08230 IPR018060 DNA binding HTH domain, AraC-type AFA_08230 IPR003313 AraC-type arabinose-binding/dimerisation domain AFA_08230 IPR009057 Homeobox-like domain superfamily AFA_08230 IPR020449 Transcription regulator HTH, AraC- type AFA_08230 IPR014710 RmlC-like jelly roll fold AFA_08230 IPR018062 HTH domain AraC-type, conserved site AFA_08230 IPR023609 Transcription regulator HTH, RhaS AFA_08230 IPR037923 Transcription regulator HTH-like AFA_08235 IPR005668 2-isopropylmalate synthase AFA_08235 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AFA_08235 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AFA_08235 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AFA_08235 IPR013785 Aldolase-type TIM barrel AFA_08235 IPR039371 LeuA, N-terminal catalytic TIM barrel domain AFA_08235 IPR000891 Pyruvate carboxyltransferase AFA_08240 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08240 IPR000847 Transcription regulator HTH, LysR AFA_08240 IPR036390 Winged helix DNA-binding domain superfamily AFA_08240 IPR005119 LysR, substrate-binding AFA_08245 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AFA_08245 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AFA_08245 IPR029065 Enolase C-terminal domain-like AFA_08245 IPR013370 Muconate/chloromuconate cycloisomerase AFA_08245 IPR036849 Enolase-like, C-terminal domain superfamily AFA_08245 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AFA_08245 IPR029017 Enolase-like, N-terminal AFA_08250 IPR015889 Intradiol ring-cleavage dioxygenase, core AFA_08250 IPR007535 Catechol dioxygenase, N-terminal AFA_08250 IPR012801 Catechol 1,2-dioxygenase, proteobacteria AFA_08250 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AFA_08255 IPR004163 Coenzyme A transferase binding site AFA_08255 IPR037171 NagB/RpiA transferase-like AFA_08255 IPR012792 3-oxoacid CoA-transferase, subunit A AFA_08255 IPR004165 Coenzyme A transferase family I AFA_08260 IPR004165 Coenzyme A transferase family I AFA_08260 IPR012791 3-oxoacid CoA-transferase, subunit B AFA_08260 IPR037171 NagB/RpiA transferase-like AFA_08260 IPR004164 Coenzyme A transferase active site AFA_08265 IPR026968 3-oxoadipate enol-lactonase 1/2 AFA_08265 IPR022742 Serine aminopeptidase, S33 AFA_08265 IPR000073 Alpha/beta hydrolase fold-1 AFA_08265 IPR029058 Alpha/Beta hydrolase fold AFA_08270 IPR011008 Dimeric alpha-beta barrel AFA_08270 IPR026029 Muconolactone isomerase domain AFA_08270 IPR003464 Muconolactone delta-isomerase AFA_08275 IPR004711 Benzoate transporter AFA_08280 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08280 IPR006073 GTP binding domain AFA_08285 IPR006073 GTP binding domain AFA_08285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08290 IPR003689 Zinc/iron permease AFA_08300 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08300 IPR003593 AAA+ ATPase domain AFA_08300 IPR003439 ABC transporter-like AFA_08300 IPR017871 ABC transporter, conserved site AFA_08305 IPR037138 Histone deacetylase domain superfamily AFA_08305 IPR000286 Histone deacetylase family AFA_08305 IPR023801 Histone deacetylase domain AFA_08305 IPR023696 Ureohydrolase domain superfamily AFA_08310 IPR000792 Transcription regulator LuxR, C-terminal AFA_08310 IPR001789 Signal transduction response regulator, receiver domain AFA_08310 IPR016032 Signal transduction response regulator, C-terminal effector AFA_08310 IPR011006 CheY-like superfamily AFA_08315 IPR001189 Manganese/iron superoxide dismutase AFA_08315 IPR019833 Manganese/iron superoxide dismutase, binding site AFA_08315 IPR019832 Manganese/iron superoxide dismutase, C-terminal AFA_08315 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AFA_08315 IPR019831 Manganese/iron superoxide dismutase, N-terminal AFA_08315 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AFA_08345 IPR000835 MarR-type HTH domain AFA_08345 IPR036390 Winged helix DNA-binding domain superfamily AFA_08345 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08350 IPR002938 FAD-binding domain AFA_08350 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_08355 IPR036259 MFS transporter superfamily AFA_08355 IPR020846 Major facilitator superfamily domain AFA_08355 IPR011701 Major facilitator superfamily AFA_08365 IPR001608 Alanine racemase, N-terminal AFA_08365 IPR029066 PLP-binding barrel AFA_08365 IPR011078 Pyridoxal phosphate homeostasis protein AFA_08370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_08370 IPR000524 Transcription regulator HTH, GntR AFA_08370 IPR036390 Winged helix DNA-binding domain superfamily AFA_08370 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08370 IPR015424 Pyridoxal phosphate-dependent transferase AFA_08370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_08370 IPR004839 Aminotransferase, class I/classII AFA_08375 IPR004779 Carboxylate/Amino Acid/Amine Transporter AFA_08375 IPR000620 EamA domain AFA_08385 IPR040603 Fanconi-associated nuclease 1, SAP domain AFA_08385 IPR033315 Fanconi-associated nuclease 1-like AFA_08385 IPR014883 VRR-NUC domain AFA_08385 IPR011856 tRNA endonuclease-like domain superfamily AFA_08395 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_08395 IPR006076 FAD dependent oxidoreductase AFA_08395 IPR023080 D-amino acid dehydrogenase DadA AFA_08400 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_08400 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AFA_08400 IPR005288 L-aspartate oxidase AFA_08400 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AFA_08400 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AFA_08405 IPR023513 Quinolinate synthase A, type 1 AFA_08405 IPR036094 Quinolinate synthetase A superfamily AFA_08405 IPR003473 Quinolinate synthetase A AFA_08410 IPR036812 NADP-dependent oxidoreductase domain superfamily AFA_08410 IPR020471 Aldo/keto reductase AFA_08410 IPR023210 NADP-dependent oxidoreductase domain AFA_08425 IPR005744 Hly-III AFA_08425 IPR004254 AdipoR/Haemolysin-III-related AFA_08430 IPR010879 Domain of unknown function DUF1508 AFA_08430 IPR036913 YegP-like superfamily AFA_08440 IPR036259 MFS transporter superfamily AFA_08440 IPR004736 MFS transporter, metabolite:H symporter AFA_08440 IPR005829 Sugar transporter, conserved site AFA_08440 IPR005828 Major facilitator, sugar transporter-like AFA_08440 IPR020846 Major facilitator superfamily domain AFA_08445 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AFA_08445 IPR036928 Amidase signature (AS) superfamily AFA_08445 IPR023631 Amidase signature domain AFA_08445 IPR020556 Amidase, conserved site AFA_08445 IPR000120 Amidase AFA_08480 IPR035906 MetI-like superfamily AFA_08480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_08480 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_08485 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AFA_08485 IPR003593 AAA+ ATPase domain AFA_08485 IPR003439 ABC transporter-like AFA_08485 IPR017871 ABC transporter, conserved site AFA_08485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08510 IPR002197 DNA binding HTH domain, Fis-type AFA_08510 IPR010523 Activator of aromatic catabolism AFA_08510 IPR004096 4-vinyl reductase, 4VR AFA_08510 IPR025944 Sigma-54 interaction domain, conserved site AFA_08510 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_08510 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_08510 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_08510 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08510 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AFA_08510 IPR009057 Homeobox-like domain superfamily AFA_08510 IPR003593 AAA+ ATPase domain AFA_08515 IPR010353 Phenol hydroxylase subunit AFA_08520 IPR009078 Ferritin-like superfamily AFA_08520 IPR012078 Methane/phenol monooxygenase, hydroxylase component AFA_08520 IPR012348 Ribonucleotide reductase-like AFA_08520 IPR003430 Methane/phenol/toluene hydroxylase AFA_08525 IPR036889 Monooxygenase component MmoB/DmpM superfamily AFA_08525 IPR003454 Monooxygenase component MmoB/DmpM AFA_08530 IPR003430 Methane/phenol/toluene hydroxylase AFA_08530 IPR012348 Ribonucleotide reductase-like AFA_08530 IPR007029 YHS domain AFA_08530 IPR009078 Ferritin-like superfamily AFA_08535 IPR006756 Phenol hydroxylase AFA_08540 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_08540 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_08540 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_08540 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_08540 IPR012675 Beta-grasp domain superfamily AFA_08540 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_08540 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_08540 IPR017938 Riboflavin synthase-like beta-barrel AFA_08540 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_08545 IPR039004 Carnitine monooxygenase oxygenase subunit AFA_08545 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AFA_08545 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_08545 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AFA_08545 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AFA_08545 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_08555 IPR005119 LysR, substrate-binding AFA_08555 IPR000847 Transcription regulator HTH, LysR AFA_08555 IPR036390 Winged helix DNA-binding domain superfamily AFA_08555 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08560 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AFA_08560 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AFA_08560 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AFA_08560 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_08560 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_08565 IPR000391 Ring-hydroxylating dioxygenase beta subunit AFA_08565 IPR032710 NTF2-like domain superfamily AFA_08565 IPR017641 Benzoate 1,2-dioxygenase, small subunit AFA_08570 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_08570 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_08570 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_08570 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_08570 IPR012675 Beta-grasp domain superfamily AFA_08570 IPR017938 Riboflavin synthase-like beta-barrel AFA_08570 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_08570 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_08570 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_08570 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_08575 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_08575 IPR036291 NAD(P)-binding domain superfamily AFA_08575 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_08580 IPR036259 MFS transporter superfamily AFA_08580 IPR011701 Major facilitator superfamily AFA_08580 IPR020846 Major facilitator superfamily domain AFA_08580 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family AFA_08580 IPR005829 Sugar transporter, conserved site AFA_08590 IPR001123 Amino acid exporter protein, LeuE-type AFA_08600 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AFA_08600 IPR023588 Transcription regulator HTH, PurR AFA_08600 IPR000843 LacI-type HTH domain AFA_08600 IPR028082 Periplasmic binding protein-like I AFA_08610 IPR006680 Amidohydrolase-related AFA_08610 IPR023512 Deaminase MtaD/DadD AFA_08610 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_08610 IPR032466 Metal-dependent hydrolase AFA_08615 IPR006043 Xanthine/uracil/vitamin C permease AFA_08615 IPR006042 Xanthine/uracil permease AFA_08615 IPR017588 Uric acid permease UacT-like AFA_08630 IPR032435 Band 7, C-terminal extension AFA_08630 IPR001972 Stomatin family AFA_08630 IPR036013 Band 7/SPFH domain superfamily AFA_08630 IPR001107 Band 7 domain AFA_08630 IPR018080 Band 7/stomatin-like, conserved site AFA_08635 IPR002810 NfeD-like, C-terminal domain AFA_08640 IPR041698 Methyltransferase domain 25 AFA_08640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_08650 IPR005590 Protein of unknown function DUF333 AFA_08660 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AFA_08660 IPR029056 Ribokinase-like AFA_08660 IPR002139 Ribokinase/fructokinase AFA_08660 IPR011611 Carbohydrate kinase PfkB AFA_08660 IPR030877 Sulfofructose kinase AFA_08670 IPR012675 Beta-grasp domain superfamily AFA_08670 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AFA_08670 IPR033728 Threonine-tRNA ligase catalytic core domain AFA_08670 IPR036621 Anticodon-binding domain superfamily AFA_08670 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AFA_08670 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AFA_08670 IPR004154 Anticodon-binding AFA_08670 IPR002320 Threonine-tRNA ligase, class IIa AFA_08670 IPR012676 TGS-like AFA_08670 IPR004095 TGS AFA_08670 IPR006195 Aminoacyl-tRNA synthetase, class II AFA_08675 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily AFA_08675 IPR019813 Translation initiation factor 3, conserved site AFA_08675 IPR001288 Translation initiation factor 3 AFA_08675 IPR019814 Translation initiation factor 3, N-terminal AFA_08675 IPR019815 Translation initiation factor 3, C-terminal AFA_08675 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily AFA_08680 IPR016185 Pre-ATP-grasp domain superfamily AFA_08680 IPR013815 ATP-grasp fold, subdomain 1 AFA_08680 IPR004215 Prokaryotic glutathione synthetase, N-terminal AFA_08680 IPR006284 Glutathione synthetase, prokaryotic AFA_08680 IPR011761 ATP-grasp fold AFA_08680 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AFA_08690 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AFA_08690 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AFA_08690 IPR035895 HPr-like superfamily AFA_08690 IPR000032 Phosphocarrier protein HPr-like AFA_08695 IPR036618 PtsI, HPr-binding domain superfamily AFA_08695 IPR008731 Phosphotransferase system, enzyme I N-terminal AFA_08695 IPR006318 Phosphotransferase system, enzyme I-like AFA_08695 IPR024692 Phosphotransferase system, enzyme I AFA_08695 IPR036637 Phosphohistidine domain superfamily AFA_08695 IPR023151 PEP-utilising enzyme, conserved site AFA_08695 IPR000121 PEP-utilising enzyme, C-terminal AFA_08695 IPR018274 PEP-utilising enzyme, active site AFA_08695 IPR040442 Pyruvate kinase-like domain superfamily AFA_08695 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_08695 IPR008279 PEP-utilising enzyme, mobile domain AFA_08720 IPR004482 Mg chelatase-related protein AFA_08720 IPR003593 AAA+ ATPase domain AFA_08720 IPR000523 Magnesium chelatase ChlI domain AFA_08720 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08720 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_08720 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_08720 IPR025158 Mg chelatase-related protein, C-terminal domain AFA_08725 IPR021137 Ribosomal protein L35 AFA_08725 IPR037229 Ribosomal protein L35 superfamily AFA_08725 IPR001706 Ribosomal protein L35, non-mitochondrial AFA_08725 IPR018265 Ribosomal protein L35, conserved site AFA_08730 IPR005813 Ribosomal protein L20 AFA_08730 IPR035566 Ribosomal protein L20, C-terminal AFA_08735 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AFA_08735 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AFA_08735 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AFA_08735 IPR002319 Phenylalanyl-tRNA synthetase AFA_08735 IPR006195 Aminoacyl-tRNA synthetase, class II AFA_08735 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AFA_08740 IPR005147 tRNA synthetase, B5-domain AFA_08740 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain AFA_08740 IPR002547 tRNA-binding domain AFA_08740 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain AFA_08740 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AFA_08740 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AFA_08740 IPR012340 Nucleic acid-binding, OB-fold AFA_08740 IPR005121 Ferrodoxin-fold anticodon-binding domain AFA_08740 IPR009061 Putative DNA-binding domain superfamily AFA_08740 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily AFA_08740 IPR005146 B3/B4 tRNA-binding domain AFA_08745 IPR005684 Integration host factor, alpha subunit AFA_08745 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AFA_08745 IPR020816 Histone-like DNA-binding protein, conserved site AFA_08745 IPR000119 Histone-like DNA-binding protein AFA_08755 IPR011197 Uncharacterised conserved protein UCP012318 AFA_08755 IPR009078 Ferritin-like superfamily AFA_08755 IPR007402 Protein of unknown function DUF455 AFA_08765 IPR039421 Type I protein exporter AFA_08765 IPR003593 AAA+ ATPase domain AFA_08765 IPR036640 ABC transporter type 1, transmembrane domain superfamily AFA_08765 IPR003439 ABC transporter-like AFA_08765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08765 IPR017871 ABC transporter, conserved site AFA_08765 IPR011527 ABC transporter type 1, transmembrane domain AFA_08770 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08770 IPR036390 Winged helix DNA-binding domain superfamily AFA_08770 IPR000944 Transcription regulator Rrf2-type AFA_08770 IPR010242 Transcription factor HTH, IscR AFA_08770 IPR030489 Transcription regulator Rrf2-type, conserved site AFA_08775 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AFA_08775 IPR000825 SUF system FeS cluster assembly, SufBD AFA_08775 IPR010231 SUF system FeS cluster assembly, SufB AFA_08780 IPR017871 ABC transporter, conserved site AFA_08780 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08780 IPR003593 AAA+ ATPase domain AFA_08780 IPR010230 FeS cluster assembly SUF system, ATPase SufC AFA_08780 IPR003439 ABC transporter-like AFA_08785 IPR000825 SUF system FeS cluster assembly, SufBD AFA_08785 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AFA_08785 IPR011542 SUF system FeS cluster assembly, SufD AFA_08790 IPR000192 Aminotransferase class V domain AFA_08790 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AFA_08790 IPR010970 Cysteine desulfurase, SufS AFA_08790 IPR015424 Pyridoxal phosphate-dependent transferase AFA_08790 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_08790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_08795 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AFA_08800 IPR034904 Fe-S cluster assembly domain superfamily AFA_08800 IPR002744 MIP18 family-like AFA_08805 IPR011006 CheY-like superfamily AFA_08805 IPR000792 Transcription regulator LuxR, C-terminal AFA_08805 IPR016032 Signal transduction response regulator, C-terminal effector AFA_08805 IPR001789 Signal transduction response regulator, receiver domain AFA_08815 IPR005534 Curli production assembly/transport component CsgG AFA_08820 IPR018893 Type VIII secretion system, CsgF AFA_08835 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA AFA_08835 IPR029044 Nucleotide-diphospho-sugar transferases AFA_08835 IPR001173 Glycosyltransferase 2-like AFA_08840 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB AFA_08840 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AFA_08840 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AFA_08840 IPR002509 NodB homology domain AFA_08845 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA AFA_08845 IPR013026 Tetratricopeptide repeat-containing domain AFA_08845 IPR011990 Tetratricopeptide-like helical domain superfamily AFA_08845 IPR019734 Tetratricopeptide repeat AFA_08860 IPR019844 Cold-shock (CSD) domain AFA_08860 IPR012340 Nucleic acid-binding, OB-fold AFA_08860 IPR012156 Cold shock, CspA AFA_08860 IPR011129 Cold shock domain AFA_08860 IPR002059 Cold-shock protein, DNA-binding AFA_08895 IPR035472 RpiR-like, SIS domain AFA_08895 IPR000281 Helix-turn-helix protein RpiR AFA_08895 IPR009057 Homeobox-like domain superfamily AFA_08895 IPR001347 Sugar isomerase (SIS) AFA_08895 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_08900 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_08900 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_08900 IPR019871 Diaminopropionate ammonia-lyase, subgroup AFA_08900 IPR010081 Diaminopropionate ammonia-lyase AFA_08905 IPR010158 Amidase, carbamoylase-type AFA_08905 IPR011650 Peptidase M20, dimerisation domain AFA_08905 IPR036264 Bacterial exopeptidase dimerisation domain AFA_08905 IPR002933 Peptidase M20 AFA_08910 IPR030678 Peptide/nickel binding protein, MppA-type AFA_08910 IPR039424 Solute-binding protein family 5 AFA_08910 IPR023765 Solute-binding protein family 5, conserved site AFA_08910 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_08910 IPR000914 Solute-binding protein family 5 domain AFA_08915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_08915 IPR035906 MetI-like superfamily AFA_08920 IPR035906 MetI-like superfamily AFA_08920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_08925 IPR003439 ABC transporter-like AFA_08925 IPR017871 ABC transporter, conserved site AFA_08925 IPR003593 AAA+ ATPase domain AFA_08925 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AFA_08925 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_08930 IPR036526 Carbon-nitrogen hydrolase superfamily AFA_08930 IPR003010 Carbon-nitrogen hydrolase AFA_08935 IPR002933 Peptidase M20 AFA_08935 IPR011650 Peptidase M20, dimerisation domain AFA_08935 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AFA_08935 IPR036264 Bacterial exopeptidase dimerisation domain AFA_08935 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AFA_08940 IPR009197 Microcystin LR degradation protein MlrC AFA_08940 IPR015995 Microcystin LR degradation protein MlrC, N-terminal AFA_08940 IPR010799 Microcystin LR degradation protein MlrC, C-terminal AFA_08985 IPR036291 NAD(P)-binding domain superfamily AFA_08985 IPR020843 Polyketide synthase, enoylreductase domain AFA_08985 IPR013149 Alcohol dehydrogenase, C-terminal AFA_08985 IPR011032 GroES-like superfamily AFA_08985 IPR013154 Alcohol dehydrogenase, N-terminal AFA_08990 IPR018060 DNA binding HTH domain, AraC-type AFA_08990 IPR009057 Homeobox-like domain superfamily AFA_08990 IPR041522 CdaR, GGDEF-like domain AFA_08995 IPR006076 FAD dependent oxidoreductase AFA_08995 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_09000 IPR038728 Uncharacterized membrane protein YkvI AFA_09010 IPR005532 Sulfatase-modifying factor enzyme AFA_09010 IPR016187 C-type lectin fold AFA_09010 IPR042095 Sulfatase-modifying factor enzyme superfamily AFA_09025 IPR003445 Cation transporter AFA_09025 IPR004772 TrkH potassium transport family AFA_09030 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AFA_09030 IPR036291 NAD(P)-binding domain superfamily AFA_09030 IPR006037 Regulator of K+ conductance, C-terminal AFA_09030 IPR003148 Regulator of K+ conductance, N-terminal AFA_09035 IPR013785 Aldolase-type TIM barrel AFA_09035 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AFA_09045 IPR042184 YqeY/Aim41, N-terminal domain AFA_09045 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AFA_09045 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AFA_09045 IPR019004 Uncharacterised protein YqeY/Aim41 AFA_09050 IPR023073 DNA polymerase, error-prone AFA_09050 IPR004805 DNA polymerase III, alpha subunit AFA_09050 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AFA_09050 IPR040982 DNA polymerase III alpha subunit finger domain AFA_09050 IPR016195 Polymerase/histidinol phosphatase-like AFA_09050 IPR003141 Polymerase/histidinol phosphatase, N-terminal AFA_09050 IPR004013 PHP domain AFA_09050 IPR029460 DNA polymerase, helix-hairpin-helix motif AFA_09080 IPR016681 Succinylglutamate desuccinylase AFA_09080 IPR007036 Succinylglutamate desuccinylase/aspartoacylase AFA_09085 IPR005064 Bordetella uptake gene AFA_09085 IPR042100 Bordetella uptake gene, domain 1 AFA_09090 IPR036390 Winged helix DNA-binding domain superfamily AFA_09090 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_09090 IPR000847 Transcription regulator HTH, LysR AFA_09090 IPR005119 LysR, substrate-binding AFA_09095 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AFA_09095 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AFA_09095 IPR012338 Beta-lactamase/transpeptidase-like AFA_09105 IPR000540 Flagellar motor protein MotA, conserved site AFA_09105 IPR002898 MotA/TolQ/ExbB proton channel AFA_09110 IPR036737 OmpA-like domain superfamily AFA_09110 IPR006665 OmpA-like domain AFA_09110 IPR025713 Motility protein B, N-terminal domain AFA_09120 IPR011283 Acetoacetyl-CoA reductase AFA_09120 IPR036291 NAD(P)-binding domain superfamily AFA_09120 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_09120 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_09130 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_09130 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_09130 IPR036291 NAD(P)-binding domain superfamily AFA_09135 IPR017938 Riboflavin synthase-like beta-barrel AFA_09135 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AFA_09135 IPR001783 Lumazine-binding protein AFA_09135 IPR026017 Lumazine-binding domain AFA_09145 IPR018951 Fumarase C, C-terminal AFA_09145 IPR024083 Fumarase/histidase, N-terminal AFA_09145 IPR020557 Fumarate lyase, conserved site AFA_09145 IPR000362 Fumarate lyase family AFA_09145 IPR008948 L-Aspartase-like AFA_09145 IPR004708 Aspartate ammonia-lyase AFA_09145 IPR022761 Fumarate lyase, N-terminal AFA_09150 IPR036458 Sodium:dicarboxylate symporter superfamily AFA_09150 IPR018107 Sodium:dicarboxylate symporter, conserved site AFA_09150 IPR001991 Sodium:dicarboxylate symporter AFA_09150 IPR023954 C4-dicarboxylate transport protein AFA_09155 IPR005467 Histidine kinase domain AFA_09155 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_09155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_09155 IPR029151 Periplasmic sensor-like domain superfamily AFA_09155 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AFA_09155 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_09155 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_09155 IPR033479 Double Cache domain 1 AFA_09155 IPR003594 Histidine kinase/HSP90-like ATPase AFA_09160 IPR001789 Signal transduction response regulator, receiver domain AFA_09160 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_09160 IPR025944 Sigma-54 interaction domain, conserved site AFA_09160 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_09160 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_09160 IPR002197 DNA binding HTH domain, Fis-type AFA_09160 IPR009057 Homeobox-like domain superfamily AFA_09160 IPR011006 CheY-like superfamily AFA_09160 IPR003593 AAA+ ATPase domain AFA_09160 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09165 IPR005119 LysR, substrate-binding AFA_09165 IPR000847 Transcription regulator HTH, LysR AFA_09165 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_09165 IPR036390 Winged helix DNA-binding domain superfamily AFA_09170 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AFA_09170 IPR011031 Multihaem cytochrome AFA_09170 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AFA_09170 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_09170 IPR012286 Tetrahaem cytochrome domain AFA_09170 IPR036280 Multiheme cytochrome superfamily AFA_09170 IPR010960 Flavocytochrome c AFA_09175 IPR036197 NarG-like superfamily AFA_09175 IPR012830 Citrate utilization protein B AFA_09180 IPR042100 Bordetella uptake gene, domain 1 AFA_09180 IPR005064 Bordetella uptake gene AFA_09185 IPR037946 Tetrathionate reductase subunit A, MopB domain AFA_09185 IPR006657 Molybdopterin dinucleotide-binding domain AFA_09185 IPR041929 Tetrathionate reductase subunit A, N-terminal AFA_09185 IPR009010 Aspartate decarboxylase-like domain superfamily AFA_09185 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AFA_09185 IPR006656 Molybdopterin oxidoreductase AFA_09190 IPR005614 NrfD family AFA_09195 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_09195 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_09195 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_09200 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_09200 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_09200 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_09200 IPR012910 TonB-dependent receptor, plug domain AFA_09200 IPR039426 Vitamin B12 transporter BtuB-like AFA_09200 IPR010105 TonB-dependent siderophore receptor AFA_09200 IPR010917 TonB-dependent receptor, conserved site AFA_09210 IPR004304 Acetamidase/Formamidase AFA_09215 IPR006680 Amidohydrolase-related AFA_09215 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_09215 IPR032466 Metal-dependent hydrolase AFA_09220 IPR006043 Xanthine/uracil/vitamin C permease AFA_09220 IPR017588 Uric acid permease UacT-like AFA_09220 IPR006042 Xanthine/uracil permease AFA_09225 IPR031107 Small heat shock protein HSP20 AFA_09225 IPR002068 Alpha crystallin/Hsp20 domain AFA_09225 IPR008978 HSP20-like chaperone AFA_09230 IPR002933 Peptidase M20 AFA_09230 IPR011650 Peptidase M20, dimerisation domain AFA_09230 IPR017439 Amidohydrolase AFA_09230 IPR036264 Bacterial exopeptidase dimerisation domain AFA_09260 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_09260 IPR002938 FAD-binding domain AFA_09265 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_09265 IPR036390 Winged helix DNA-binding domain superfamily AFA_09265 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_09265 IPR000835 MarR-type HTH domain AFA_09270 IPR022925 NADH pyrophosphatase NudC AFA_09270 IPR015376 Zinc ribbon, NADH pyrophosphatase AFA_09270 IPR015797 NUDIX hydrolase-like domain superfamily AFA_09270 IPR000086 NUDIX hydrolase domain AFA_09270 IPR020084 NUDIX hydrolase, conserved site AFA_09275 IPR013527 YicC-like, N-terminal AFA_09275 IPR013551 Domain of unknown function DUF1732 AFA_09275 IPR005229 Conserved hypothetical protein CHP00255 AFA_09280 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AFA_09280 IPR004593 Nuclease SbcCD subunit D AFA_09280 IPR029052 Metallo-dependent phosphatase-like AFA_09280 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain AFA_09285 IPR041685 AAA domain, group 15 AFA_09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09290 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_09290 IPR027408 PNPase/RNase PH domain superfamily AFA_09290 IPR018336 Ribonuclease PH, conserved site AFA_09290 IPR036345 Exoribonuclease, PH domain 2 superfamily AFA_09290 IPR015847 Exoribonuclease, phosphorolytic domain 2 AFA_09290 IPR001247 Exoribonuclease, phosphorolytic domain 1 AFA_09290 IPR002381 Ribonuclease PH, bacterial-type AFA_09295 IPR029001 Inosine triphosphate pyrophosphatase-like AFA_09295 IPR002637 Ham1-like protein AFA_09295 IPR020922 dITP/XTP pyrophosphatase AFA_09300 IPR006638 Elp3/MiaB/NifB AFA_09300 IPR023404 Radical SAM, alpha/beta horseshoe AFA_09300 IPR007197 Radical SAM AFA_09300 IPR034505 Anaerobic coproporphyrinogen-III oxidase AFA_09300 IPR010723 HemN, C-terminal AFA_09300 IPR004559 Heme chaperone HemW-like AFA_09310 IPR000182 GNAT domain AFA_09310 IPR016181 Acyl-CoA N-acyltransferase AFA_09315 IPR005119 LysR, substrate-binding AFA_09315 IPR000847 Transcription regulator HTH, LysR AFA_09315 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_09315 IPR036390 Winged helix DNA-binding domain superfamily AFA_09330 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09330 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AFA_09330 IPR003593 AAA+ ATPase domain AFA_09330 IPR003439 ABC transporter-like AFA_09330 IPR017871 ABC transporter, conserved site AFA_09330 IPR008995 Molybdate/tungstate binding, C-terminal AFA_09330 IPR013611 Transport-associated OB, type 2 AFA_09335 IPR005667 Sulphate ABC transporter permease protein 2 AFA_09335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_09335 IPR011865 Sulphate ABC transporter, permease protein CysT AFA_09335 IPR035906 MetI-like superfamily AFA_09340 IPR026045 Ferric binding protein AFA_09345 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_09345 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_09345 IPR033892 Ferredoxin--NADP reductase, bacteria AFA_09345 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_09345 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_09345 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_09345 IPR017938 Riboflavin synthase-like beta-barrel AFA_09350 IPR006056 RidA family AFA_09350 IPR019897 RidA, conserved site AFA_09350 IPR035959 RutC-like superfamily AFA_09350 IPR006175 YjgF/YER057c/UK114 family AFA_09355 IPR033454 RecG, wedge domain AFA_09355 IPR004609 ATP-dependent DNA helicase RecG AFA_09355 IPR011545 DEAD/DEAH box helicase domain AFA_09355 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_09355 IPR001650 Helicase, C-terminal AFA_09355 IPR012340 Nucleic acid-binding, OB-fold AFA_09355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09360 IPR005119 LysR, substrate-binding AFA_09360 IPR000847 Transcription regulator HTH, LysR AFA_09360 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_09360 IPR036390 Winged helix DNA-binding domain superfamily AFA_09365 IPR023188 DNA-binding protein Dps, conserved site AFA_09365 IPR012347 Ferritin-like AFA_09365 IPR009078 Ferritin-like superfamily AFA_09365 IPR008331 Ferritin/DPS protein domain AFA_09365 IPR002177 DNA-binding protein Dps AFA_09370 IPR000709 Leu/Ile/Val-binding protein AFA_09370 IPR028082 Periplasmic binding protein-like I AFA_09370 IPR028081 Leucine-binding protein domain AFA_09375 IPR017871 ABC transporter, conserved site AFA_09375 IPR008995 Molybdate/tungstate binding, C-terminal AFA_09375 IPR040582 MalK, OB fold domain AFA_09375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09375 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC AFA_09375 IPR003439 ABC transporter-like AFA_09375 IPR003593 AAA+ ATPase domain AFA_09380 IPR035906 MetI-like superfamily AFA_09380 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE AFA_09380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_09385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_09385 IPR035906 MetI-like superfamily AFA_09390 IPR006059 Bacterial extracellular solute-binding protein AFA_09390 IPR006061 Solute-binding family 1, conserved site AFA_09395 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AFA_09395 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AFA_09395 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_09395 IPR036291 NAD(P)-binding domain superfamily AFA_09395 IPR000304 Pyrroline-5-carboxylate reductase AFA_09400 IPR028082 Periplasmic binding protein-like I AFA_09400 IPR000709 Leu/Ile/Val-binding protein AFA_09400 IPR028081 Leucine-binding protein domain AFA_09405 IPR001851 ABC transporter, permease AFA_09410 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AFA_09410 IPR001851 ABC transporter, permease AFA_09415 IPR003439 ABC transporter-like AFA_09415 IPR017871 ABC transporter, conserved site AFA_09415 IPR003593 AAA+ ATPase domain AFA_09415 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_09415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09420 IPR003593 AAA+ ATPase domain AFA_09420 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_09420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09420 IPR003439 ABC transporter-like AFA_09420 IPR017871 ABC transporter, conserved site AFA_09430 IPR036249 Thioredoxin-like superfamily AFA_09430 IPR004046 Glutathione S-transferase, C-terminal AFA_09430 IPR010987 Glutathione S-transferase, C-terminal-like AFA_09430 IPR040079 Glutathione Transferase family AFA_09430 IPR004045 Glutathione S-transferase, N-terminal AFA_09430 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_09435 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AFA_09435 IPR011042 Six-bladed beta-propeller, TolB-like AFA_09435 IPR029058 Alpha/Beta hydrolase fold AFA_09440 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFA_09440 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AFA_09440 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AFA_09440 IPR036291 NAD(P)-binding domain superfamily AFA_09440 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AFA_09445 IPR036291 NAD(P)-binding domain superfamily AFA_09445 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_09445 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_09450 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AFA_09450 IPR006422 D-erythrose-4-phosphate dehydrogenase AFA_09450 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AFA_09450 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AFA_09450 IPR036291 NAD(P)-binding domain superfamily AFA_09450 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AFA_09455 IPR024083 Fumarase/histidase, N-terminal AFA_09455 IPR005677 Fumarate hydratase, class II AFA_09455 IPR020557 Fumarate lyase, conserved site AFA_09455 IPR018951 Fumarase C, C-terminal AFA_09455 IPR000362 Fumarate lyase family AFA_09455 IPR022761 Fumarate lyase, N-terminal AFA_09455 IPR008948 L-Aspartase-like AFA_09460 IPR011042 Six-bladed beta-propeller, TolB-like AFA_09460 IPR012938 Glucose/Sorbosone dehydrogenase AFA_09460 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AFA_09465 IPR013216 Methyltransferase type 11 AFA_09465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_09470 IPR006016 UspA AFA_09470 IPR006015 Universal stress protein A family AFA_09470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_09475 IPR036909 Cytochrome c-like domain superfamily AFA_09475 IPR002324 Cytochrome c, class ID AFA_09475 IPR009056 Cytochrome c-like domain AFA_09480 IPR036259 MFS transporter superfamily AFA_09480 IPR004747 Cyanate transport system protein AFA_09480 IPR011701 Major facilitator superfamily AFA_09480 IPR020846 Major facilitator superfamily domain AFA_09490 IPR005119 LysR, substrate-binding AFA_09490 IPR036390 Winged helix DNA-binding domain superfamily AFA_09490 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_09490 IPR000847 Transcription regulator HTH, LysR AFA_09500 IPR023299 P-type ATPase, cytoplasmic domain N AFA_09500 IPR006121 Heavy metal-associated domain, HMA AFA_09500 IPR006122 Heavy metal-associated domain, copper ion-binding AFA_09500 IPR017969 Heavy-metal-associated, conserved site AFA_09500 IPR008250 P-type ATPase, A domain superfamily AFA_09500 IPR036412 HAD-like superfamily AFA_09500 IPR018303 P-type ATPase, phosphorylation site AFA_09500 IPR036163 Heavy metal-associated domain superfamily AFA_09500 IPR027256 P-type ATPase, subfamily IB AFA_09500 IPR001757 P-type ATPase AFA_09500 IPR023214 HAD superfamily AFA_09500 IPR023298 P-type ATPase, transmembrane domain superfamily AFA_09505 IPR019884 YtoQ family protein AFA_09510 IPR011010 DNA breaking-rejoining enzyme, catalytic core AFA_09510 IPR023009 Tyrosine recombinase XerC/XerD AFA_09510 IPR011932 Tyrosine recombinase XerD AFA_09510 IPR013762 Integrase-like, catalytic domain superfamily AFA_09510 IPR011931 Tyrosine recombinase XerC AFA_09510 IPR002104 Integrase, catalytic domain AFA_09510 IPR010998 Integrase/recombinase, N-terminal AFA_09510 IPR004107 Integrase, SAM-like, N-terminal AFA_09520 IPR001117 Multicopper oxidase, type 1 AFA_09520 IPR011706 Multicopper oxidase, type 2 AFA_09520 IPR011707 Multicopper oxidase, type 3 AFA_09520 IPR002355 Multicopper oxidase, copper-binding site AFA_09520 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_09520 IPR008972 Cupredoxin AFA_09535 IPR022488 Polyphosphate kinase-2-related AFA_09535 IPR022489 Polyphosphate:AMP phosphotransferase AFA_09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09660 IPR023009 Tyrosine recombinase XerC/XerD AFA_09660 IPR011931 Tyrosine recombinase XerC AFA_09660 IPR004107 Integrase, SAM-like, N-terminal AFA_09660 IPR002104 Integrase, catalytic domain AFA_09660 IPR010998 Integrase/recombinase, N-terminal AFA_09660 IPR013762 Integrase-like, catalytic domain superfamily AFA_09660 IPR011010 DNA breaking-rejoining enzyme, catalytic core AFA_09670 IPR017441 Protein kinase, ATP binding site AFA_09670 IPR000719 Protein kinase domain AFA_09670 IPR011009 Protein kinase-like domain superfamily AFA_09670 IPR008271 Serine/threonine-protein kinase, active site AFA_09670 IPR005543 PASTA domain AFA_09705 IPR033954 Disulphide bond isomerase, DsbC/G AFA_09705 IPR012336 Thioredoxin-like fold AFA_09705 IPR036249 Thioredoxin-like superfamily AFA_09705 IPR017937 Thioredoxin, conserved site AFA_09705 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AFA_09730 IPR014152 DNA helicase subunit AddA AFA_09730 IPR014016 UvrD-like helicase, ATP-binding domain AFA_09730 IPR000212 DNA helicase, UvrD/REP type AFA_09730 IPR011604 Exonuclease, phage-type/RecB, C-terminal AFA_09730 IPR014017 UvrD-like DNA helicase, C-terminal AFA_09730 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09730 IPR011335 Restriction endonuclease type II-like AFA_09730 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AFA_09730 IPR034739 UvrD/AddA helicase, N-terminal AFA_09745 IPR001650 Helicase, C-terminal AFA_09745 IPR038718 SNF2-like, N-terminal domain superfamily AFA_09745 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09745 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_09745 IPR000330 SNF2-related, N-terminal domain AFA_09765 IPR001405 Uncharacterised protein family UPF0758 AFA_09765 IPR020891 Uncharacterised protein family UPF0758, conserved site AFA_09765 IPR037518 MPN domain AFA_09765 IPR025657 RadC-like JAB domain AFA_09820 IPR016484 GTP-binding protein EngA AFA_09820 IPR005225 Small GTP-binding protein domain AFA_09820 IPR015946 K homology domain-like, alpha/beta AFA_09820 IPR032859 GTPase Der, C-terminal KH-domain-like AFA_09820 IPR006073 GTP binding domain AFA_09820 IPR031166 EngA-type guanine nucleotide-binding (G) domain AFA_09820 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09885 IPR025501 ATP binding protein MinD AFA_09885 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AFA_09885 IPR010223 ATP binding protein MinD, bacterial-type AFA_09885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09890 IPR007055 BON domain AFA_09890 IPR006664 Outer membrane protein, bacterial AFA_09890 IPR006665 OmpA-like domain AFA_09890 IPR006690 Outer membrane protein, OmpA-like, conserved site AFA_09890 IPR036737 OmpA-like domain superfamily AFA_09945 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AFA_09945 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AFA_09945 IPR037026 Vgr protein, OB-fold domain superfamily AFA_09945 IPR006531 Gp5 N-terminal AFA_09950 IPR003593 AAA+ ATPase domain AFA_09950 IPR017729 Type VI secretion system, ATPase ClpV1 AFA_09950 IPR019489 Clp ATPase, C-terminal AFA_09950 IPR036628 Clp, N-terminal domain superfamily AFA_09950 IPR004176 Clp, N-terminal AFA_09950 IPR003959 ATPase, AAA-type, core AFA_09950 IPR018368 ClpA/B, conserved site 1 AFA_09950 IPR041546 ClpA/ClpB, AAA lid domain AFA_09950 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_09950 IPR001270 ClpA/B family AFA_09990 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_09990 IPR036291 NAD(P)-binding domain superfamily AFA_09990 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_09995 IPR007553 Domain of unknown function DUF523 AFA_10030 IPR016174 Di-haem cytochrome, transmembrane AFA_10030 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AFA_10040 IPR023480 Uncharacterised protein family UPF0312/YceI AFA_10040 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AFA_10040 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AFA_10045 IPR036249 Thioredoxin-like superfamily AFA_10045 IPR006660 Arsenate reductase-like AFA_10045 IPR006659 Arsenate reductase AFA_10050 IPR010987 Glutathione S-transferase, C-terminal-like AFA_10050 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_10050 IPR004045 Glutathione S-transferase, N-terminal AFA_10050 IPR004046 Glutathione S-transferase, C-terminal AFA_10050 IPR036249 Thioredoxin-like superfamily AFA_10060 IPR005025 NADPH-dependent FMN reductase-like AFA_10060 IPR029039 Flavoprotein-like superfamily AFA_10070 IPR018228 Deoxyribonuclease, TatD-related, conserved site AFA_10070 IPR001130 TatD family AFA_10070 IPR015991 Uncharacterised hydrolase TatD-type AFA_10070 IPR032466 Metal-dependent hydrolase AFA_10075 IPR004622 DNA polymerase III, delta prime subunit AFA_10075 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AFA_10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10075 IPR015199 DNA polymerase III, delta subunit, C-terminal AFA_10085 IPR003770 Endolytic murein transglycosylase AFA_10090 IPR017703 YgfZ/GcvT conserved site AFA_10090 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AFA_10090 IPR006222 Aminomethyltransferase, folate-binding domain AFA_10090 IPR028896 Aminomethyltransferase-like AFA_10095 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AFA_10095 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AFA_10095 IPR036291 NAD(P)-binding domain superfamily AFA_10095 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AFA_10095 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_10095 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_10095 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AFA_10095 IPR011548 3-hydroxyisobutyrate dehydrogenase AFA_10105 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_10105 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_10105 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_10105 IPR006089 Acyl-CoA dehydrogenase, conserved site AFA_10105 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_10105 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_10105 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_10110 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AFA_10110 IPR037021 RnfH superfamily AFA_10110 IPR005346 RnfH protein AFA_10115 IPR023393 START-like domain superfamily AFA_10115 IPR005031 Coenzyme Q-binding protein COQ10, START domain AFA_10120 IPR020081 SsrA-binding protein, conserved site AFA_10120 IPR000037 SsrA-binding protein AFA_10120 IPR023620 Small protein B AFA_10125 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_10125 IPR023753 FAD/NAD(P)-binding domain AFA_10135 IPR008279 PEP-utilising enzyme, mobile domain AFA_10135 IPR040442 Pyruvate kinase-like domain superfamily AFA_10135 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_10135 IPR013815 ATP-grasp fold, subdomain 1 AFA_10135 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AFA_10135 IPR018274 PEP-utilising enzyme, active site AFA_10135 IPR023151 PEP-utilising enzyme, conserved site AFA_10135 IPR000121 PEP-utilising enzyme, C-terminal AFA_10135 IPR006319 Phosphoenolpyruvate synthase AFA_10135 IPR036637 Phosphohistidine domain superfamily AFA_10140 IPR005177 Bifunctional kinase-pyrophosphorylase AFA_10140 IPR026530 Phosphoenolpyruvate synthase regulatory protein AFA_10145 IPR036928 Amidase signature (AS) superfamily AFA_10145 IPR023631 Amidase signature domain AFA_10145 IPR020556 Amidase, conserved site AFA_10145 IPR000120 Amidase AFA_10150 IPR029028 Alpha/beta knot methyltransferases AFA_10150 IPR001537 tRNA/rRNA methyltransferase, SpoU type AFA_10150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AFA_10150 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AFA_10150 IPR029064 50S ribosomal protein L30e-like AFA_10155 IPR022898 Ribonuclease HII AFA_10155 IPR036397 Ribonuclease H superfamily AFA_10155 IPR001352 Ribonuclease HII/HIII AFA_10155 IPR024567 Ribonuclease HII/HIII domain AFA_10155 IPR012337 Ribonuclease H-like superfamily AFA_10160 IPR003835 Glycosyl transferase, family 19 AFA_10165 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AFA_10165 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal AFA_10165 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily AFA_10165 IPR011004 Trimeric LpxA-like superfamily AFA_10165 IPR001451 Hexapeptide repeat AFA_10170 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AFA_10170 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AFA_10170 IPR029069 HotDog domain superfamily AFA_10175 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region AFA_10175 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD AFA_10175 IPR001451 Hexapeptide repeat AFA_10175 IPR011004 Trimeric LpxA-like superfamily AFA_10180 IPR024930 Skp domain superfamily AFA_10180 IPR005632 Chaperone protein Skp AFA_10185 IPR000184 Bacterial surface antigen (D15) AFA_10185 IPR010827 POTRA domain, BamA/TamA-like AFA_10185 IPR039910 Surface antigen D15-like AFA_10185 IPR023707 Outer membrane protein assembly factor BamA AFA_10185 IPR034746 POTRA domain AFA_10190 IPR008915 Peptidase M50 AFA_10190 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase AFA_10190 IPR036034 PDZ superfamily AFA_10190 IPR041489 PDZ domain 6 AFA_10190 IPR001478 PDZ domain AFA_10195 IPR026877 DXP reductoisomerase C-terminal domain AFA_10195 IPR036169 DXP reductoisomerase, C-terminal domain superfamily AFA_10195 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase AFA_10195 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal AFA_10195 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal AFA_10195 IPR036291 NAD(P)-binding domain superfamily AFA_10200 IPR000374 Phosphatidate cytidylyltransferase AFA_10205 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AFA_10205 IPR001441 Decaprenyl diphosphate synthase-like AFA_10205 IPR036424 Decaprenyl diphosphate synthase-like superfamily AFA_10210 IPR036191 RRF superfamily AFA_10210 IPR002661 Ribosome recycling factor AFA_10210 IPR023584 Ribosome recycling factor domain AFA_10215 IPR011817 Uridylate kinase AFA_10215 IPR015963 Uridylate kinase, bacteria AFA_10215 IPR036393 Acetylglutamate kinase-like superfamily AFA_10215 IPR001048 Aspartate/glutamate/uridylate kinase AFA_10220 IPR018101 Translation elongation factor Ts, conserved site AFA_10220 IPR036402 Elongation factor Ts, dimerisation domain superfamily AFA_10220 IPR001816 Translation elongation factor EFTs/EF1B AFA_10220 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AFA_10220 IPR009060 UBA-like superfamily AFA_10225 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AFA_10225 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AFA_10225 IPR001865 Ribosomal protein S2 AFA_10225 IPR018130 Ribosomal protein S2, conserved site AFA_10230 IPR001714 Peptidase M24, methionine aminopeptidase AFA_10230 IPR000994 Peptidase M24 AFA_10230 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AFA_10230 IPR036005 Creatinase/aminopeptidase-like AFA_10235 IPR002934 Polymerase, nucleotidyl transferase domain AFA_10235 IPR002912 ACT domain AFA_10235 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme AFA_10235 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AFA_10235 IPR003607 HD/PDEase domain AFA_10235 IPR006674 HD domain AFA_10240 IPR002771 Multiple antibiotic resistance (MarC)-related AFA_10255 IPR035584 Amidophosphoribosyltransferase, N-terminal AFA_10255 IPR017932 Glutamine amidotransferase type 2 domain AFA_10255 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_10255 IPR000836 Phosphoribosyltransferase domain AFA_10255 IPR029057 Phosphoribosyltransferase-like AFA_10255 IPR005854 Amidophosphoribosyltransferase AFA_10260 IPR003825 Colicin V production, CvpA AFA_10270 IPR001645 Folylpolyglutamate synthetase AFA_10270 IPR018109 Folylpolyglutamate synthetase, conserved site AFA_10270 IPR036565 Mur-like, catalytic domain superfamily AFA_10270 IPR013221 Mur ligase, central AFA_10270 IPR036615 Mur ligase, C-terminal domain superfamily AFA_10270 IPR004101 Mur ligase, C-terminal AFA_10275 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AFA_10275 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_10275 IPR023753 FAD/NAD(P)-binding domain AFA_10275 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AFA_10275 IPR006258 Dihydrolipoamide dehydrogenase AFA_10275 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFA_10275 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AFA_10280 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AFA_10280 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AFA_10280 IPR036625 E3-binding domain superfamily AFA_10280 IPR004167 Peripheral subunit-binding domain AFA_10280 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AFA_10280 IPR011053 Single hybrid motif AFA_10280 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex AFA_10280 IPR000089 Biotin/lipoyl attachment AFA_10285 IPR005474 Transketolase, N-terminal AFA_10285 IPR029061 Thiamin diphosphate-binding fold AFA_10285 IPR041621 Pyruvate dehydrogenase E1 component, middle domain AFA_10285 IPR004660 Pyruvate dehydrogenase E1 component AFA_10285 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal AFA_10285 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AFA_10290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_10290 IPR000014 PAS domain AFA_10290 IPR000700 PAS-associated, C-terminal AFA_10290 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_10290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_10290 IPR005467 Histidine kinase domain AFA_10290 IPR003594 Histidine kinase/HSP90-like ATPase AFA_10290 IPR035965 PAS domain superfamily AFA_10290 IPR013767 PAS fold AFA_10290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_10290 IPR001610 PAC motif AFA_10295 IPR001789 Signal transduction response regulator, receiver domain AFA_10295 IPR016032 Signal transduction response regulator, C-terminal effector AFA_10295 IPR011006 CheY-like superfamily AFA_10295 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_10295 IPR000792 Transcription regulator LuxR, C-terminal AFA_10300 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AFA_10300 IPR036291 NAD(P)-binding domain superfamily AFA_10300 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AFA_10300 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AFA_10300 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AFA_10305 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AFA_10305 IPR001567 Peptidase M3A/M3B catalytic domain AFA_10310 IPR036249 Thioredoxin-like superfamily AFA_10310 IPR003782 Copper chaperone SCO1/SenC AFA_10315 IPR000640 Elongation factor EFG, domain V-like AFA_10315 IPR035647 EF-G domain III/V-like AFA_10315 IPR031157 Tr-type G domain, conserved site AFA_10315 IPR009022 Elongation factor G, domain III AFA_10315 IPR041095 Elongation Factor G, domain II AFA_10315 IPR035649 EFG, domain V AFA_10315 IPR004161 Translation elongation factor EFTu-like, domain 2 AFA_10315 IPR009000 Translation protein, beta-barrel domain superfamily AFA_10315 IPR005517 Translation elongation factor EFG/EF2, domain IV AFA_10315 IPR004540 Translation elongation factor EFG/EF2 AFA_10315 IPR000795 Transcription factor, GTP-binding domain AFA_10315 IPR005225 Small GTP-binding protein domain AFA_10315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_10315 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_10315 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10325 IPR001845 HTH ArsR-type DNA-binding domain AFA_10325 IPR011991 ArsR-like helix-turn-helix domain AFA_10325 IPR036390 Winged helix DNA-binding domain superfamily AFA_10325 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_10330 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AFA_10330 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_10330 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AFA_10330 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AFA_10330 IPR006258 Dihydrolipoamide dehydrogenase AFA_10330 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AFA_10330 IPR023753 FAD/NAD(P)-binding domain AFA_10335 IPR009061 Putative DNA-binding domain superfamily AFA_10335 IPR000551 MerR-type HTH domain AFA_10335 IPR015358 Transcription regulator MerR, DNA binding AFA_10335 IPR011789 Cu(I)-responsive transcriptional regulator AFA_10340 IPR004681 TRAP transporter large membrane protein DctM AFA_10340 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_10345 IPR007387 TRAP transporter, small membrane protein DctQ AFA_10350 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_10350 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_10350 IPR004682 TRAP transporter solute receptor, DctP family AFA_10355 IPR018509 Dehydroquinase, class II, conserved site AFA_10355 IPR001874 Dehydroquinase, class II AFA_10355 IPR036441 Dehydroquinase, class II superfamily AFA_10360 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_10360 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_10360 IPR036291 NAD(P)-binding domain superfamily AFA_10365 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_10365 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_10365 IPR036291 NAD(P)-binding domain superfamily AFA_10370 IPR029058 Alpha/Beta hydrolase fold AFA_10370 IPR000073 Alpha/beta hydrolase fold-1 AFA_10370 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase AFA_10375 IPR003673 CoA-transferase family III AFA_10375 IPR023606 CoA-transferase family III domain superfamily AFA_10385 IPR002155 Thiolase AFA_10385 IPR020617 Thiolase, C-terminal AFA_10385 IPR020616 Thiolase, N-terminal AFA_10385 IPR012793 Beta-ketoadipyl CoA thiolase AFA_10385 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_10385 IPR020610 Thiolase, active site AFA_10385 IPR016039 Thiolase-like AFA_10385 IPR020613 Thiolase, conserved site AFA_10405 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AFA_10405 IPR013785 Aldolase-type TIM barrel AFA_10405 IPR036130 Pyridoxine 5'-phosphate synthase AFA_10410 IPR003423 Outer membrane efflux protein AFA_10410 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AFA_10415 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AFA_10415 IPR001036 Acriflavin resistance protein AFA_10415 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AFA_10420 IPR006143 RND efflux pump, membrane fusion protein AFA_10420 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AFA_10425 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10425 IPR012693 ABC transporter, phosphonate import, PhnC AFA_10425 IPR003439 ABC transporter-like AFA_10425 IPR003593 AAA+ ATPase domain AFA_10425 IPR017871 ABC transporter, conserved site AFA_10445 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_10445 IPR020610 Thiolase, active site AFA_10445 IPR020617 Thiolase, C-terminal AFA_10445 IPR020616 Thiolase, N-terminal AFA_10445 IPR016039 Thiolase-like AFA_10445 IPR002155 Thiolase AFA_10450 IPR020616 Thiolase, N-terminal AFA_10450 IPR020617 Thiolase, C-terminal AFA_10450 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_10450 IPR016039 Thiolase-like AFA_10450 IPR020610 Thiolase, active site AFA_10450 IPR002155 Thiolase AFA_10460 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AFA_10460 IPR040442 Pyruvate kinase-like domain superfamily AFA_10460 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_10460 IPR039556 ICL/PEPM domain AFA_10460 IPR012695 2-methylisocitrate lyase AFA_10465 IPR000847 Transcription regulator HTH, LysR AFA_10465 IPR005119 LysR, substrate-binding AFA_10465 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain AFA_10465 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_10465 IPR036390 Winged helix DNA-binding domain superfamily AFA_10470 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily AFA_10470 IPR011193 Ornithine/lysine/arginine decarboxylase AFA_10470 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AFA_10470 IPR015424 Pyridoxal phosphate-dependent transferase AFA_10470 IPR000310 Orn/Lys/Arg decarboxylase, major domain AFA_10470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_10470 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AFA_10470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_10490 IPR020590 Guanylate kinase, conserved site AFA_10490 IPR017665 Guanylate kinase AFA_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10490 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AFA_10490 IPR008144 Guanylate kinase-like domain AFA_10495 IPR003716 DNA-directed RNA polymerase, omega subunit AFA_10495 IPR036161 RPB6/omega subunit-like superfamily AFA_10495 IPR006110 RNA polymerase, subunit omega/K/RPB6 AFA_10495 IPR012293 RNA polymerase subunit, RPB6/omega AFA_10500 IPR007685 RelA/SpoT AFA_10500 IPR003607 HD/PDEase domain AFA_10500 IPR012675 Beta-grasp domain superfamily AFA_10500 IPR004095 TGS AFA_10500 IPR012676 TGS-like AFA_10500 IPR033655 RelA, TGS domain AFA_10500 IPR002912 ACT domain AFA_10500 IPR004811 RelA/SpoT family AFA_10510 IPR011606 Branched-chain amino acid transport, permease AFA_10510 IPR004471 Branched-chain amino acid transport, AzlC AFA_10515 IPR018392 LysM domain AFA_10515 IPR016047 Peptidase M23 AFA_10515 IPR013731 Opacity-associated protein A, N-terminal AFA_10515 IPR011055 Duplicated hybrid motif AFA_10520 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AFA_10520 IPR027304 Trigger factor/SurA domain superfamily AFA_10520 IPR015391 SurA N-terminal AFA_10520 IPR023034 Peptidyl-prolyl isomerase SurA AFA_10520 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AFA_10525 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily AFA_10525 IPR030395 Glycerophosphodiester phosphodiesterase domain AFA_10530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_10530 IPR007473 Ribosomal RNA large subunit methyltransferase J AFA_10530 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AFA_10535 IPR036986 RNA-binding S4 domain superfamily AFA_10535 IPR006145 Pseudouridine synthase, RsuA/RluA AFA_10535 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_10535 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AFA_10535 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AFA_10535 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AFA_10535 IPR002942 RNA-binding S4 domain AFA_10540 IPR007440 Chorismate--pyruvate lyase AFA_10540 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AFA_10545 IPR020846 Major facilitator superfamily domain AFA_10545 IPR036259 MFS transporter superfamily AFA_10545 IPR011701 Major facilitator superfamily AFA_10550 IPR023210 NADP-dependent oxidoreductase domain AFA_10550 IPR036812 NADP-dependent oxidoreductase domain superfamily AFA_10550 IPR020471 Aldo/keto reductase AFA_10555 IPR017918 Nitrogen regulatory protein PII, conserved site AFA_10555 IPR002187 Nitrogen regulatory protein PII AFA_10555 IPR011322 Nitrogen regulatory PII-like, alpha/beta AFA_10555 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AFA_10555 IPR002332 Nitrogen regulatory protein P-II, urydylation site AFA_10560 IPR010920 LSM domain superfamily AFA_10560 IPR006685 Mechanosensitive ion channel MscS AFA_10560 IPR011066 Mechanosensitive ion channel MscS, C-terminal AFA_10560 IPR030192 Miniconductance mechanosensitive channel YbdG AFA_10565 IPR009049 Argininosuccinate lyase AFA_10565 IPR029419 Argininosuccinate lyase, C-terminal AFA_10565 IPR000362 Fumarate lyase family AFA_10565 IPR022761 Fumarate lyase, N-terminal AFA_10565 IPR024083 Fumarase/histidase, N-terminal AFA_10565 IPR008948 L-Aspartase-like AFA_10565 IPR020557 Fumarate lyase, conserved site AFA_10575 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase AFA_10575 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_10575 IPR014395 Penicillin/GL-7-ACA/AHL acylase AFA_10575 IPR023343 Penicillin amidase type, domain 1 AFA_10575 IPR033813 Penicillin G acylase, C-terminal AFA_10580 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_10580 IPR006076 FAD dependent oxidoreductase AFA_10590 IPR002792 TRAM domain AFA_10590 IPR010280 (Uracil-5)-methyltransferase family AFA_10590 IPR030391 RNA methyltransferase TrmA, conserved site AFA_10590 IPR012340 Nucleic acid-binding, OB-fold AFA_10590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_10590 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD AFA_10590 IPR030390 RNA methyltransferase TrmA, active site AFA_10595 IPR016047 Peptidase M23 AFA_10595 IPR018392 LysM domain AFA_10595 IPR011055 Duplicated hybrid motif AFA_10595 IPR036779 LysM domain superfamily AFA_10600 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AFA_10600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_10605 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AFA_10605 IPR030048 Survival protein SurE AFA_10605 IPR036523 SurE-like phosphatase/nucleotidase superfamily AFA_10610 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY AFA_10615 IPR017861 Kae1/TsaD family AFA_10615 IPR000905 Gcp-like domain AFA_10615 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AFA_10620 IPR026033 Azaguanine-like transporters AFA_10620 IPR006043 Xanthine/uracil/vitamin C permease AFA_10625 IPR036249 Thioredoxin-like superfamily AFA_10625 IPR017937 Thioredoxin, conserved site AFA_10625 IPR005746 Thioredoxin AFA_10625 IPR013766 Thioredoxin domain AFA_10640 IPR023582 Impact family AFA_10640 IPR001498 Impact, N-terminal AFA_10640 IPR035647 EF-G domain III/V-like AFA_10640 IPR036956 Impact, N-terminal domain superfamily AFA_10640 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AFA_10640 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_10645 IPR032781 ABC-transporter extension domain AFA_10645 IPR003439 ABC transporter-like AFA_10645 IPR003593 AAA+ ATPase domain AFA_10645 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10650 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AFA_10650 IPR003507 Peptidase family S66 AFA_10650 IPR040449 LD-carboxypeptidase, N-terminal AFA_10650 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal AFA_10650 IPR029062 Class I glutamine amidotransferase-like AFA_10650 IPR040921 LD-carboxypeptidase, C-terminal AFA_10655 IPR028883 tRNA-specific adenosine deaminase AFA_10655 IPR002125 Cytidine and deoxycytidylate deaminase domain AFA_10655 IPR016192 APOBEC/CMP deaminase, zinc-binding AFA_10655 IPR016193 Cytidine deaminase-like AFA_10660 IPR003593 AAA+ ATPase domain AFA_10660 IPR003439 ABC transporter-like AFA_10660 IPR017871 ABC transporter, conserved site AFA_10660 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10665 IPR013525 ABC-2 type transporter AFA_10665 IPR000412 ABC-2 transporter AFA_10675 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_10675 IPR004681 TRAP transporter large membrane protein DctM AFA_10680 IPR007387 TRAP transporter, small membrane protein DctQ AFA_10685 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_10685 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_10685 IPR004682 TRAP transporter solute receptor, DctP family AFA_10690 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_10690 IPR006076 FAD dependent oxidoreductase AFA_10700 IPR033983 Thiazole synthase ThiG AFA_10700 IPR013785 Aldolase-type TIM barrel AFA_10700 IPR008867 Thiazole synthase AFA_10705 IPR029035 DHS-like NAD/FAD-binding domain superfamily AFA_10705 IPR012000 Thiamine pyrophosphate enzyme, central domain AFA_10705 IPR029061 Thiamin diphosphate-binding fold AFA_10705 IPR017820 Sulphoacetaldehyde acetyltransferase AFA_10705 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AFA_10705 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AFA_10710 IPR013615 CbbQ/NirQ/NorQ, C-terminal AFA_10710 IPR011704 ATPase, dynein-related, AAA domain AFA_10710 IPR025865 Cobaltochelatase subunit CobS N-terminal domain AFA_10710 IPR006537 Cobaltochelatase subunit CobS AFA_10710 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10720 IPR029016 GAF-like domain superfamily AFA_10720 IPR036390 Winged helix DNA-binding domain superfamily AFA_10720 IPR014757 Transcription regulator IclR, C-terminal AFA_10720 IPR005471 Transcription regulator IclR, N-terminal AFA_10720 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_10725 IPR002505 Phosphate acetyl/butaryl transferase AFA_10725 IPR004614 Phosphate acetyltransferase AFA_10725 IPR042112 Phosphate acetyltransferase, domain 2 AFA_10725 IPR012147 Phosphate acetyl/butyryltransferase AFA_10725 IPR042113 Phosphate acetyltransferase, domain 1 AFA_10730 IPR002781 Transmembrane protein TauE-like AFA_10740 IPR035570 UPF0234, N-terminal AFA_10740 IPR007551 Protein of unknown function DUF520 AFA_10740 IPR035571 UPF0234-like, C-terminal AFA_10740 IPR036183 YajQ-like superfamily AFA_10745 IPR020845 AMP-binding, conserved site AFA_10745 IPR000873 AMP-dependent synthetase/ligase AFA_10745 IPR042099 AMP-dependent synthetase-like superfamily AFA_10745 IPR025110 AMP-binding enzyme, C-terminal domain AFA_10750 IPR003691 Putative fluoride ion transporter CrcB AFA_10755 IPR004739 GMP synthase, glutamine amidotransferase AFA_10755 IPR017926 Glutamine amidotransferase AFA_10755 IPR029062 Class I glutamine amidotransferase-like AFA_10755 IPR022955 GMP synthase AFA_10755 IPR025777 GMP synthetase ATP pyrophosphatase domain AFA_10755 IPR022310 NAD/GMP synthase AFA_10755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_10755 IPR001674 GMP synthase, C-terminal AFA_10760 IPR018062 HTH domain AraC-type, conserved site AFA_10760 IPR018060 DNA binding HTH domain, AraC-type AFA_10760 IPR009057 Homeobox-like domain superfamily AFA_10765 IPR016833 Putative sodium bile acid cotransporter AFA_10765 IPR038770 Sodium/solute symporter superfamily AFA_10775 IPR017937 Thioredoxin, conserved site AFA_10775 IPR036249 Thioredoxin-like superfamily AFA_10775 IPR013766 Thioredoxin domain AFA_10775 IPR013740 Redoxin AFA_10780 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) AFA_10780 IPR013785 Aldolase-type TIM barrel AFA_10780 IPR011060 Ribulose-phosphate binding barrel AFA_10785 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_10785 IPR004681 TRAP transporter large membrane protein DctM AFA_10795 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_10795 IPR001406 Pseudouridine synthase I, TruA AFA_10795 IPR020095 Pseudouridine synthase I, TruA, C-terminal AFA_10795 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AFA_10805 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AFA_10805 IPR000534 Semialdehyde dehydrogenase, NAD-binding AFA_10805 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type AFA_10805 IPR012080 Aspartate-semialdehyde dehydrogenase AFA_10805 IPR036291 NAD(P)-binding domain superfamily AFA_10805 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AFA_10810 IPR024084 Isopropylmalate dehydrogenase-like domain AFA_10810 IPR004429 Isopropylmalate dehydrogenase AFA_10810 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AFA_10815 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AFA_10815 IPR033940 3-isopropylmalate dehydratase, swivel domain AFA_10815 IPR004431 3-isopropylmalate dehydratase, small subunit AFA_10815 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AFA_10820 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AFA_10820 IPR036008 Aconitase, iron-sulfur domain AFA_10820 IPR018136 Aconitase family, 4Fe-4S cluster binding site AFA_10820 IPR004430 3-isopropylmalate dehydratase, large subunit AFA_10820 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AFA_10820 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AFA_10825 IPR003779 Carboxymuconolactone decarboxylase-like AFA_10825 IPR004675 Alkylhydroperoxidase AhpD core AFA_10825 IPR029032 AhpD-like AFA_10835 IPR001789 Signal transduction response regulator, receiver domain AFA_10835 IPR016032 Signal transduction response regulator, C-terminal effector AFA_10835 IPR000792 Transcription regulator LuxR, C-terminal AFA_10835 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_10835 IPR011006 CheY-like superfamily AFA_10840 IPR001789 Signal transduction response regulator, receiver domain AFA_10840 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_10840 IPR035965 PAS domain superfamily AFA_10840 IPR000700 PAS-associated, C-terminal AFA_10840 IPR000014 PAS domain AFA_10840 IPR001610 PAC motif AFA_10840 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_10840 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_10840 IPR005467 Histidine kinase domain AFA_10840 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_10840 IPR003594 Histidine kinase/HSP90-like ATPase AFA_10840 IPR011006 CheY-like superfamily AFA_10840 IPR013656 PAS fold-4 AFA_10850 IPR035904 Chorismate synthase AroC superfamily AFA_10850 IPR000453 Chorismate synthase AFA_10850 IPR020541 Chorismate synthase, conserved site AFA_10855 IPR003846 Protein adenylyltransferase SelO AFA_10865 IPR023679 Uncharacterised protein family UPF0761, bacterial AFA_10865 IPR017039 Virulence factor BrkB AFA_10875 IPR001269 tRNA-dihydrouridine synthase AFA_10875 IPR004653 tRNA-dihydrouridine(20/20a) synthase AFA_10875 IPR018517 tRNA-dihydrouridine synthase, conserved site AFA_10875 IPR035587 DUS-like, FMN-binding domain AFA_10875 IPR013785 Aldolase-type TIM barrel AFA_10880 IPR002575 Aminoglycoside phosphotransferase AFA_10880 IPR005280 Homoserine kinase, type II AFA_10880 IPR011009 Protein kinase-like domain superfamily AFA_10905 IPR022399 Helicase/secretion neighbourhood ATPase AFA_10905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_10905 IPR001482 Type II/IV secretion system protein AFA_10910 IPR004846 Type II/III secretion system AFA_10910 IPR014004 Transport-associated and nodulation domain, bacteria AFA_10910 IPR007055 BON domain AFA_10910 IPR032789 Pilus formation protein, N-terminal AFA_10910 IPR001775 GspD/PilQ family AFA_10940 IPR010105 TonB-dependent siderophore receptor AFA_10940 IPR010917 TonB-dependent receptor, conserved site AFA_10940 IPR012910 TonB-dependent receptor, plug domain AFA_10940 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_10940 IPR039423 TonB-dependent receptor-like AFA_10940 IPR011662 Secretin/TonB, short N-terminal domain AFA_10940 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_10940 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_10945 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AFA_10945 IPR032623 FecR, N-terminal AFA_10945 IPR006860 FecR protein AFA_10950 IPR039425 RNA polymerase sigma-70 like AFA_10950 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AFA_10950 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_10950 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AFA_10950 IPR013325 RNA polymerase sigma factor, region 2 AFA_10950 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_10950 IPR014284 RNA polymerase sigma-70 like domain AFA_10950 IPR007627 RNA polymerase sigma-70 region 2 AFA_10955 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AFA_10955 IPR011234 Fumarylacetoacetase-like, C-terminal AFA_10960 IPR008162 Inorganic pyrophosphatase AFA_10960 IPR036649 Inorganic pyrophosphatase superfamily AFA_10970 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AFA_10980 IPR000860 Porphobilinogen deaminase AFA_10980 IPR022417 Porphobilinogen deaminase, N-terminal AFA_10980 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily AFA_10980 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AFA_10980 IPR022418 Porphobilinogen deaminase, C-terminal AFA_10985 IPR022301 Integral membrane protein YjbE AFA_10985 IPR005496 Integral membrane protein TerC AFA_10990 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AFA_10990 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AFA_10990 IPR005810 Succinyl-CoA ligase, alpha subunit AFA_10990 IPR003781 CoA-binding AFA_10990 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AFA_10990 IPR036291 NAD(P)-binding domain superfamily AFA_10990 IPR016102 Succinyl-CoA synthetase-like AFA_10995 IPR011761 ATP-grasp fold AFA_10995 IPR016102 Succinyl-CoA synthetase-like AFA_10995 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AFA_10995 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AFA_10995 IPR013815 ATP-grasp fold, subdomain 1 AFA_10995 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AFA_10995 IPR005809 Succinate--CoA synthetase, beta subunit AFA_11005 IPR038071 UROD/MetE-like superfamily AFA_11005 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AFA_11005 IPR006276 Cobalamin-independent methionine synthase AFA_11005 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AFA_11010 IPR005119 LysR, substrate-binding AFA_11010 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain AFA_11010 IPR036390 Winged helix DNA-binding domain superfamily AFA_11010 IPR000847 Transcription regulator HTH, LysR AFA_11010 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11015 IPR003783 Regulatory protein RecX AFA_11015 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11025 IPR039420 Transcriptional regulatory protein WalR-like AFA_11025 IPR001789 Signal transduction response regulator, receiver domain AFA_11025 IPR016032 Signal transduction response regulator, C-terminal effector AFA_11025 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_11025 IPR011006 CheY-like superfamily AFA_11025 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11030 IPR003594 Histidine kinase/HSP90-like ATPase AFA_11030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_11030 IPR005467 Histidine kinase domain AFA_11030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_11030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_11030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_11035 IPR005828 Major facilitator, sugar transporter-like AFA_11035 IPR005829 Sugar transporter, conserved site AFA_11035 IPR020846 Major facilitator superfamily domain AFA_11035 IPR036292 Proline/betaine transporter ProP, C-terminal AFA_11035 IPR036259 MFS transporter superfamily AFA_11035 IPR004736 MFS transporter, metabolite:H symporter AFA_11035 IPR015041 Osmosensory transporter coiled coil AFA_11040 IPR007476 Putative exonuclease, RdgC AFA_11050 IPR042099 AMP-dependent synthetase-like superfamily AFA_11050 IPR000873 AMP-dependent synthetase/ligase AFA_11050 IPR025110 AMP-binding enzyme, C-terminal domain AFA_11050 IPR020845 AMP-binding, conserved site AFA_11055 IPR014748 Enoyl-CoA hydratase, C-terminal AFA_11055 IPR001753 Enoyl-CoA hydratase/isomerase AFA_11055 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_11055 IPR029045 ClpP/crotonase-like domain superfamily AFA_11060 IPR007436 Protein of unknown function DUF485 AFA_11065 IPR014083 Cation/acetate symporter ActP AFA_11065 IPR038377 Sodium/glucose symporter superfamily AFA_11065 IPR001734 Sodium/solute symporter AFA_11065 IPR018212 Sodium/solute symporter, conserved site AFA_11070 IPR015590 Aldehyde dehydrogenase domain AFA_11070 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_11070 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_11070 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_11070 IPR016161 Aldehyde/histidinol dehydrogenase AFA_11070 IPR010061 Methylmalonate-semialdehyde dehydrogenase AFA_11075 IPR006130 Aspartate/ornithine carbamoyltransferase AFA_11075 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AFA_11075 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AFA_11075 IPR002082 Aspartate carbamoyltransferase AFA_11075 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AFA_11090 IPR001264 Glycosyl transferase, family 51 AFA_11090 IPR023346 Lysozyme-like domain superfamily AFA_11090 IPR036950 Penicillin binding protein transglycosylase domain AFA_11090 IPR012338 Beta-lactamase/transpeptidase-like AFA_11090 IPR001460 Penicillin-binding protein, transpeptidase AFA_11095 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AFA_11095 IPR011625 Alpha-2-macroglobulin, bait region domain AFA_11095 IPR001599 Alpha-2-macroglobulin AFA_11095 IPR002890 Macroglobulin domain AFA_11105 IPR004136 Nitronate monooxygenase AFA_11105 IPR013785 Aldolase-type TIM barrel AFA_11110 IPR034505 Anaerobic coproporphyrinogen-III oxidase AFA_11110 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN AFA_11110 IPR006638 Elp3/MiaB/NifB AFA_11110 IPR010723 HemN, C-terminal AFA_11110 IPR007197 Radical SAM AFA_11110 IPR023404 Radical SAM, alpha/beta horseshoe AFA_11115 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AFA_11115 IPR005663 Monovalent cation proton antiporter subunit A AFA_11115 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AFA_11115 IPR025383 Domain of unknown function DUF4040 AFA_11115 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AFA_11115 IPR005281 Monovalent cation:proton antiporter, subunit B AFA_11120 IPR006673 Mnh complex subunit C1 AFA_11120 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AFA_11125 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AFA_11125 IPR004775 Na(+)/H(+) antiporter subunit D1 AFA_11135 IPR007208 Na(+)/H(+) antiporter subunit F-like AFA_11150 IPR023051 Potassium uptake protein, low affinity, Kup AFA_11150 IPR003855 Potassium transporter AFA_11155 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_11155 IPR005467 Histidine kinase domain AFA_11155 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_11155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_11155 IPR003594 Histidine kinase/HSP90-like ATPase AFA_11155 IPR013727 Two-component sensor kinase, N-terminal AFA_11155 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_11160 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11160 IPR039420 Transcriptional regulatory protein WalR-like AFA_11160 IPR001789 Signal transduction response regulator, receiver domain AFA_11160 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response AFA_11160 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_11160 IPR011006 CheY-like superfamily AFA_11165 IPR003400 Biopolymer transport protein ExbD/TolR AFA_11170 IPR002898 MotA/TolQ/ExbB proton channel AFA_11180 IPR003593 AAA+ ATPase domain AFA_11180 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal AFA_11180 IPR003439 ABC transporter-like AFA_11180 IPR017871 ABC transporter, conserved site AFA_11180 IPR008995 Molybdate/tungstate binding, C-terminal AFA_11180 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11180 IPR024765 TOBE-like domain AFA_11180 IPR005666 Sulphate transport system permease protein 1 AFA_11185 IPR011866 Sulphate ABC transporter, permease protein CysW AFA_11185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_11185 IPR005667 Sulphate ABC transporter permease protein 2 AFA_11185 IPR035906 MetI-like superfamily AFA_11190 IPR011865 Sulphate ABC transporter, permease protein CysT AFA_11190 IPR005667 Sulphate ABC transporter permease protein 2 AFA_11190 IPR035906 MetI-like superfamily AFA_11190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_11195 IPR000957 Sulphate/thiosulphate-binding, conserved site AFA_11195 IPR005669 Thiosulphate/Sulfate-binding protein AFA_11195 IPR034408 Sulphate/thiosulphate-binding site AFA_11210 IPR019844 Cold-shock (CSD) domain AFA_11210 IPR002059 Cold-shock protein, DNA-binding AFA_11210 IPR012340 Nucleic acid-binding, OB-fold AFA_11210 IPR011129 Cold shock domain AFA_11210 IPR012156 Cold shock, CspA AFA_11230 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AFA_11230 IPR020816 Histone-like DNA-binding protein, conserved site AFA_11230 IPR000119 Histone-like DNA-binding protein AFA_11235 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AFA_11235 IPR006367 Sirohaem synthase, N-terminal AFA_11235 IPR000878 Tetrapyrrole methylase AFA_11235 IPR019478 Sirohaem synthase, dimerisation domain AFA_11235 IPR028281 Siroheme synthase, central domain AFA_11235 IPR012409 Sirohaem synthase AFA_11235 IPR036291 NAD(P)-binding domain superfamily AFA_11235 IPR035996 Tetrapyrrole methylase superfamily AFA_11235 IPR014777 Tetrapyrrole methylase, subdomain 1 AFA_11235 IPR014776 Tetrapyrrole methylase, subdomain 2 AFA_11235 IPR006366 Uroporphyrin-III C-methyltransferase AFA_11240 IPR036909 Cytochrome c-like domain superfamily AFA_11240 IPR009056 Cytochrome c-like domain AFA_11245 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily AFA_11245 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AFA_11255 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11255 IPR040523 AsnC-like ligand binding domain AFA_11260 IPR040523 AsnC-like ligand binding domain AFA_11265 IPR013785 Aldolase-type TIM barrel AFA_11265 IPR007197 Radical SAM AFA_11265 IPR010505 Molybdenum cofactor synthesis C-terminal AFA_11265 IPR006638 Elp3/MiaB/NifB AFA_11265 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AFA_11265 IPR013483 Molybdenum cofactor biosynthesis protein A AFA_11275 IPR028281 Siroheme synthase, central domain AFA_11275 IPR036291 NAD(P)-binding domain superfamily AFA_11275 IPR006367 Sirohaem synthase, N-terminal AFA_11275 IPR006366 Uroporphyrin-III C-methyltransferase AFA_11275 IPR014776 Tetrapyrrole methylase, subdomain 2 AFA_11275 IPR019478 Sirohaem synthase, dimerisation domain AFA_11275 IPR035996 Tetrapyrrole methylase superfamily AFA_11275 IPR012409 Sirohaem synthase AFA_11275 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AFA_11275 IPR000878 Tetrapyrrole methylase AFA_11275 IPR014777 Tetrapyrrole methylase, subdomain 1 AFA_11280 IPR024167 Cytochrome c4-like AFA_11280 IPR009056 Cytochrome c-like domain AFA_11280 IPR036909 Cytochrome c-like domain superfamily AFA_11280 IPR008168 Cytochrome c, class IC AFA_11285 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AFA_11285 IPR009056 Cytochrome c-like domain AFA_11285 IPR036909 Cytochrome c-like domain superfamily AFA_11285 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily AFA_11290 IPR000524 Transcription regulator HTH, GntR AFA_11290 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11290 IPR036390 Winged helix DNA-binding domain superfamily AFA_11290 IPR015424 Pyridoxal phosphate-dependent transferase AFA_11290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_11290 IPR004839 Aminotransferase, class I/classII AFA_11295 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AFA_11295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_11295 IPR006237 L-methionine gamma-lyase AFA_11295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_11295 IPR015424 Pyridoxal phosphate-dependent transferase AFA_11300 IPR004441 RNA methyltransferase TrmH family AFA_11300 IPR029028 Alpha/beta knot methyltransferases AFA_11300 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AFA_11300 IPR001537 tRNA/rRNA methyltransferase, SpoU type AFA_11300 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AFA_11300 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AFA_11300 IPR029064 50S ribosomal protein L30e-like AFA_11305 IPR022967 RNA-binding domain, S1 AFA_11305 IPR013223 Ribonuclease B, N-terminal OB domain AFA_11305 IPR001900 Ribonuclease II/R AFA_11305 IPR012340 Nucleic acid-binding, OB-fold AFA_11305 IPR040476 RNase II/RNase R, cold shock domain AFA_11305 IPR003029 S1 domain AFA_11305 IPR013668 Ribonuclease R winged-helix domain AFA_11305 IPR011805 Ribonuclease R AFA_11305 IPR011129 Cold shock domain AFA_11305 IPR004476 Ribonuclease II/ribonuclease R AFA_11305 IPR022966 Ribonuclease II/R, conserved site AFA_11335 IPR017938 Riboflavin synthase-like beta-barrel AFA_11335 IPR013113 FAD-binding 9, siderophore-interacting AFA_11335 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_11335 IPR007037 Siderophore-interacting protein, C-terminal domain AFA_11335 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_11335 IPR039374 Siderophore-interacting protein AFA_11355 IPR000045 Prepilin type IV endopeptidase, peptidase domain AFA_11355 IPR010627 Peptidase A24A, N-terminal AFA_11355 IPR014032 Peptidase A24A, prepilin type IV, bacterial AFA_11365 IPR005119 LysR, substrate-binding AFA_11365 IPR000847 Transcription regulator HTH, LysR AFA_11365 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11365 IPR036390 Winged helix DNA-binding domain superfamily AFA_11370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11370 IPR008995 Molybdate/tungstate binding, C-terminal AFA_11370 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 AFA_11370 IPR017871 ABC transporter, conserved site AFA_11370 IPR003439 ABC transporter-like AFA_11370 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal AFA_11370 IPR003593 AAA+ ATPase domain AFA_11370 IPR013611 Transport-associated OB, type 2 AFA_11380 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AFA_11380 IPR023214 HAD superfamily AFA_11380 IPR041492 Haloacid dehalogenase-like hydrolase AFA_11380 IPR006439 HAD hydrolase, subfamily IA AFA_11380 IPR036412 HAD-like superfamily AFA_11380 IPR006323 Phosphonoacetaldehyde hydrolase AFA_11385 IPR026045 Ferric binding protein AFA_11390 IPR006076 FAD dependent oxidoreductase AFA_11390 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_11395 IPR000182 GNAT domain AFA_11395 IPR016181 Acyl-CoA N-acyltransferase AFA_11405 IPR002925 Dienelactone hydrolase AFA_11405 IPR029058 Alpha/Beta hydrolase fold AFA_11410 IPR024530 Putative quorum-sensing-regulated virulence factor AFA_11415 IPR010987 Glutathione S-transferase, C-terminal-like AFA_11415 IPR036249 Thioredoxin-like superfamily AFA_11415 IPR004045 Glutathione S-transferase, N-terminal AFA_11415 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_11415 IPR040079 Glutathione Transferase family AFA_11425 IPR003829 Pirin, N-terminal domain AFA_11425 IPR014710 RmlC-like jelly roll fold AFA_11425 IPR011051 RmlC-like cupin domain superfamily AFA_11425 IPR012093 Pirin AFA_11425 IPR008778 Pirin, C-terminal domain AFA_11435 IPR036526 Carbon-nitrogen hydrolase superfamily AFA_11435 IPR003010 Carbon-nitrogen hydrolase AFA_11435 IPR001110 Uncharacterised protein family UPF0012, conserved site AFA_11440 IPR036259 MFS transporter superfamily AFA_11440 IPR020846 Major facilitator superfamily domain AFA_11440 IPR011701 Major facilitator superfamily AFA_11445 IPR011701 Major facilitator superfamily AFA_11445 IPR020846 Major facilitator superfamily domain AFA_11445 IPR036259 MFS transporter superfamily AFA_11445 IPR004747 Cyanate transport system protein AFA_11450 IPR009057 Homeobox-like domain superfamily AFA_11450 IPR014710 RmlC-like jelly roll fold AFA_11450 IPR011051 RmlC-like cupin domain superfamily AFA_11450 IPR018060 DNA binding HTH domain, AraC-type AFA_11450 IPR018062 HTH domain AraC-type, conserved site AFA_11450 IPR003313 AraC-type arabinose-binding/dimerisation domain AFA_11455 IPR004711 Benzoate transporter AFA_11465 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AFA_11465 IPR005501 LamB/YcsF/PxpA-like AFA_11470 IPR036390 Winged helix DNA-binding domain superfamily AFA_11470 IPR000847 Transcription regulator HTH, LysR AFA_11470 IPR005119 LysR, substrate-binding AFA_11470 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11475 IPR012675 Beta-grasp domain superfamily AFA_11475 IPR036884 [2Fe-2S]-binding domain superfamily AFA_11475 IPR002888 [2Fe-2S]-binding AFA_11475 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_11475 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_11475 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_11480 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AFA_11480 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AFA_11480 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AFA_11480 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AFA_11490 IPR032466 Metal-dependent hydrolase AFA_11490 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_11490 IPR014311 Guanine deaminase AFA_11490 IPR006680 Amidohydrolase-related AFA_11495 IPR007269 Isoprenylcysteine carboxyl methyltransferase AFA_11500 IPR001789 Signal transduction response regulator, receiver domain AFA_11500 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11500 IPR011006 CheY-like superfamily AFA_11500 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_11500 IPR039420 Transcriptional regulatory protein WalR-like AFA_11505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_11505 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_11505 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_11505 IPR005467 Histidine kinase domain AFA_11505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_11505 IPR003594 Histidine kinase/HSP90-like ATPase AFA_11505 IPR003660 HAMP domain AFA_11510 IPR007127 RNA polymerase sigma factor 70, region 1.1 AFA_11510 IPR028630 RNA polymerase sigma factor RpoD AFA_11510 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11510 IPR007627 RNA polymerase sigma-70 region 2 AFA_11510 IPR009042 RNA polymerase sigma-70 region 1.2 AFA_11510 IPR000943 RNA polymerase sigma-70 AFA_11510 IPR007624 RNA polymerase sigma-70 region 3 AFA_11510 IPR007631 RNA polymerase sigma factor 70, non-essential domain AFA_11510 IPR007630 RNA polymerase sigma-70 region 4 AFA_11510 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_11510 IPR013325 RNA polymerase sigma factor, region 2 AFA_11510 IPR042189 Sigma-70 factor, region 1.1 superfamily AFA_11510 IPR014284 RNA polymerase sigma-70 like domain AFA_11510 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AFA_11515 IPR019475 DNA primase, DnaB-helicase binding domain AFA_11515 IPR034151 Bacterial DnaG primase, TOPRIM domain AFA_11515 IPR036977 DNA Primase, CHC2-type zinc finger AFA_11515 IPR013173 DNA primase DnaG, DnaB-binding domain AFA_11515 IPR006171 TOPRIM domain AFA_11515 IPR006295 DNA primase, DnaG AFA_11515 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AFA_11515 IPR013264 DNA primase, catalytic core, N-terminal AFA_11515 IPR030846 DNA primase DnaG, bacteria AFA_11515 IPR002694 Zinc finger, CHC2-type AFA_11515 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AFA_11520 IPR001911 Ribosomal protein S21 AFA_11520 IPR018278 Ribosomal protein S21, conserved site AFA_11520 IPR038380 Ribosomal protein S21 superfamily AFA_11525 IPR023747 Xanthine-guanine phosphoribosyltransferase AFA_11525 IPR029057 Phosphoribosyltransferase-like AFA_11525 IPR000836 Phosphoribosyltransferase domain AFA_11530 IPR033128 Adenylosuccinate synthase, active site AFA_11530 IPR042110 Adenylosuccinate synthetase, domain 2 AFA_11530 IPR042111 Adenylosuccinate synthetase, domain 3 AFA_11530 IPR001114 Adenylosuccinate synthetase AFA_11530 IPR018220 Adenylosuccinate synthase, GTP-binding site AFA_11530 IPR042109 Adenylosuccinate synthetase, domain 1 AFA_11530 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11535 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AFA_11535 IPR004517 ATP phosphoribosyltransferase regulatory subunit AFA_11535 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AFA_11540 IPR001107 Band 7 domain AFA_11540 IPR036013 Band 7/SPFH domain superfamily AFA_11540 IPR010200 HflC AFA_11545 IPR010201 HflK AFA_11545 IPR036013 Band 7/SPFH domain superfamily AFA_11545 IPR001107 Band 7 domain AFA_11545 IPR020980 Menbrane protein HflK, N-terminal AFA_11545 IPR001972 Stomatin family AFA_11550 IPR032305 GTP-binding protein, middle domain AFA_11550 IPR030394 HflX-type guanine nucleotide-binding (G) domain AFA_11550 IPR006073 GTP binding domain AFA_11550 IPR025121 GTPase HflX, N-terminal AFA_11550 IPR042108 GTPase HflX, N-terminal domain superfamily AFA_11550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11550 IPR035647 EF-G domain III/V-like AFA_11550 IPR016496 GTPase HflX AFA_11555 IPR005001 RNA-binding protein Hfq AFA_11555 IPR010920 LSM domain superfamily AFA_11560 IPR015424 Pyridoxal phosphate-dependent transferase AFA_11560 IPR005861 Histidinol-phosphate aminotransferase family AFA_11560 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AFA_11560 IPR004839 Aminotransferase, class I/classII AFA_11560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_11560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_11565 IPR031166 EngA-type guanine nucleotide-binding (G) domain AFA_11565 IPR015946 K homology domain-like, alpha/beta AFA_11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11565 IPR005225 Small GTP-binding protein domain AFA_11565 IPR006073 GTP binding domain AFA_11565 IPR032859 GTPase Der, C-terminal KH-domain-like AFA_11565 IPR003593 AAA+ ATPase domain AFA_11565 IPR016484 GTP-binding protein EngA AFA_11570 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AFA_11570 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AFA_11570 IPR017687 Outer membrane protein assembly factor BamB AFA_11570 IPR002372 Pyrrolo-quinoline quinone repeat AFA_11570 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AFA_11575 IPR011990 Tetratricopeptide-like helical domain superfamily AFA_11575 IPR026039 Uncharacterised protein family UPF0070 AFA_11575 IPR018704 Tetratricopeptide repeat-like domain AFA_11580 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AFA_11580 IPR033656 Histidyl-anticodon-binding AFA_11580 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AFA_11580 IPR015807 Histidine-tRNA ligase AFA_11580 IPR036621 Anticodon-binding domain superfamily AFA_11580 IPR004154 Anticodon-binding AFA_11580 IPR006195 Aminoacyl-tRNA synthetase, class II AFA_11585 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial AFA_11585 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type AFA_11585 IPR011005 Dihydropteroate synthase-like AFA_11595 IPR007197 Radical SAM AFA_11595 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AFA_11595 IPR013785 Aldolase-type TIM barrel AFA_11595 IPR027492 Dual-specificity RNA methyltransferase RlmN AFA_11595 IPR040072 Methyltransferase (Class A) AFA_11600 IPR001564 Nucleoside diphosphate kinase AFA_11600 IPR036850 Nucleoside diphosphate kinase-like domain superfamily AFA_11600 IPR034907 Nucleoside diphosphate kinase-like domain AFA_11600 IPR023005 Nucleoside diphosphate kinase, active site AFA_11605 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_11605 IPR002300 Aminoacyl-tRNA synthetase, class Ia AFA_11605 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AFA_11605 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AFA_11605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_11605 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AFA_11605 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AFA_11605 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AFA_11605 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AFA_11605 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AFA_11605 IPR002303 Valine-tRNA ligase AFA_11610 IPR010233 Ubiquinone biosynthesis O-methyltransferase AFA_11610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_11615 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AFA_11615 IPR029028 Alpha/beta knot methyltransferases AFA_11615 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AFA_11615 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AFA_11615 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AFA_11620 IPR011033 PRC-barrel-like superfamily AFA_11620 IPR011961 16S rRNA processing protein RimM AFA_11620 IPR002676 RimM, N-terminal AFA_11620 IPR036976 RimM, N-terminal domain superfamily AFA_11620 IPR009000 Translation protein, beta-barrel domain superfamily AFA_11625 IPR000307 Ribosomal protein S16 AFA_11625 IPR023803 Ribosomal protein S16 domain superfamily AFA_11630 IPR036868 TusA-like domain superfamily AFA_11630 IPR001455 TusA-like domain AFA_11635 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AFA_11635 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AFA_11635 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AFA_11635 IPR009000 Translation protein, beta-barrel domain superfamily AFA_11635 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AFA_11635 IPR002318 Alanine-tRNA ligase, class IIc AFA_11635 IPR003156 DHHA1 domain AFA_11635 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AFA_11635 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AFA_11650 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily AFA_11650 IPR014306 Hydroxyisourate hydrolase AFA_11650 IPR023418 Transthyretin, thyroxine binding site AFA_11650 IPR023419 Transthyretin, conserved site AFA_11650 IPR023416 Transthyretin/hydroxyisourate hydrolase domain AFA_11675 IPR006061 Solute-binding family 1, conserved site AFA_11675 IPR006059 Bacterial extracellular solute-binding protein AFA_11680 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_11680 IPR006076 FAD dependent oxidoreductase AFA_11680 IPR023080 D-amino acid dehydrogenase DadA AFA_11685 IPR017938 Riboflavin synthase-like beta-barrel AFA_11685 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_11685 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_11685 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_11685 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_11685 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_11685 IPR012675 Beta-grasp domain superfamily AFA_11685 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_11685 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_11690 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AFA_11690 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative AFA_11690 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AFA_11690 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AFA_11690 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AFA_11690 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AFA_11695 IPR018522 DNA topoisomerase, type IIA, conserved site AFA_11695 IPR002288 DNA gyrase B subunit, C-terminal AFA_11695 IPR003594 Histidine kinase/HSP90-like ATPase AFA_11695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_11695 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_11695 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_11695 IPR001241 DNA topoisomerase, type IIA AFA_11695 IPR006171 TOPRIM domain AFA_11695 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AFA_11695 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AFA_11695 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative AFA_11695 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AFA_11700 IPR013766 Thioredoxin domain AFA_11700 IPR036249 Thioredoxin-like superfamily AFA_11700 IPR005746 Thioredoxin AFA_11700 IPR017937 Thioredoxin, conserved site AFA_11705 IPR003593 AAA+ ATPase domain AFA_11705 IPR011113 Rho termination factor, RNA-binding domain AFA_11705 IPR036269 Rho termination factor, N-terminal domain superfamily AFA_11705 IPR011112 Rho termination factor, N-terminal AFA_11705 IPR012340 Nucleic acid-binding, OB-fold AFA_11705 IPR004665 Transcription termination factor Rho AFA_11705 IPR041703 Transcription termination factor Rho, ATP binding domain AFA_11705 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AFA_11705 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11705 IPR011129 Cold shock domain AFA_11710 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AFA_11710 IPR033922 NAD(P) binding domain of glutamate dehydrogenase AFA_11710 IPR036291 NAD(P)-binding domain superfamily AFA_11710 IPR014362 Glutamate dehydrogenase AFA_11710 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AFA_11710 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AFA_11710 IPR033524 Leu/Phe/Val dehydrogenases active site AFA_11715 IPR012338 Beta-lactamase/transpeptidase-like AFA_11715 IPR023650 Beta-lactamase, class-A active site AFA_11715 IPR000871 Beta-lactamase, class-A AFA_11725 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AFA_11725 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AFA_11725 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme AFA_11730 IPR003828 Epoxyqueuosine reductase QueH AFA_11735 IPR036628 Clp, N-terminal domain superfamily AFA_11735 IPR004176 Clp, N-terminal AFA_11735 IPR001270 ClpA/B family AFA_11735 IPR018368 ClpA/B, conserved site 1 AFA_11735 IPR028299 ClpA/B, conserved site 2 AFA_11735 IPR041546 ClpA/ClpB, AAA lid domain AFA_11735 IPR019489 Clp ATPase, C-terminal AFA_11735 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11735 IPR017730 Chaperonin ClpB AFA_11735 IPR003959 ATPase, AAA-type, core AFA_11735 IPR003593 AAA+ ATPase domain AFA_11740 IPR018490 Cyclic nucleotide-binding-like AFA_11740 IPR000595 Cyclic nucleotide-binding domain AFA_11740 IPR012318 Crp-type HTH domain AFA_11740 IPR014710 RmlC-like jelly roll fold AFA_11740 IPR018335 Transcription regulator HTH, Crp-type, conserved site AFA_11740 IPR036390 Winged helix DNA-binding domain superfamily AFA_11740 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_11755 IPR013783 Immunoglobulin-like fold AFA_11755 IPR032879 FixG, C-terminal immunoglobulin-like domain AFA_11755 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG AFA_11755 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_11755 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_11760 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AFA_11760 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AFA_11760 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AFA_11760 IPR008168 Cytochrome c, class IC AFA_11760 IPR009056 Cytochrome c-like domain AFA_11760 IPR036909 Cytochrome c-like domain superfamily AFA_11775 IPR004677 Cytochrome c oxidase cbb3-type, subunit I AFA_11775 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AFA_11775 IPR000883 Cytochrome c oxidase subunit I AFA_11775 IPR023616 Cytochrome c oxidase-like, subunit I domain AFA_11775 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AFA_11785 IPR036412 HAD-like superfamily AFA_11785 IPR006122 Heavy metal-associated domain, copper ion-binding AFA_11785 IPR023299 P-type ATPase, cytoplasmic domain N AFA_11785 IPR018303 P-type ATPase, phosphorylation site AFA_11785 IPR023298 P-type ATPase, transmembrane domain superfamily AFA_11785 IPR008250 P-type ATPase, A domain superfamily AFA_11785 IPR027256 P-type ATPase, subfamily IB AFA_11785 IPR001757 P-type ATPase AFA_11785 IPR036163 Heavy metal-associated domain superfamily AFA_11785 IPR006121 Heavy metal-associated domain, HMA AFA_11785 IPR017969 Heavy-metal-associated, conserved site AFA_11785 IPR023214 HAD superfamily AFA_11795 IPR040442 Pyruvate kinase-like domain superfamily AFA_11795 IPR006254 Isocitrate lyase AFA_11795 IPR039556 ICL/PEPM domain AFA_11795 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AFA_11795 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_11800 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal AFA_11800 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 AFA_11800 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF AFA_11810 IPR000462 CDP-alcohol phosphatidyltransferase AFA_11810 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial AFA_11810 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AFA_11815 IPR038476 UvrC homology region 2 superfamily AFA_11815 IPR001162 UvrC family homology region AFA_11815 IPR035901 GIY-YIG endonuclease superfamily AFA_11815 IPR004791 UvrABC system, subunit C AFA_11815 IPR036876 UVR domain superfamily AFA_11815 IPR001943 UVR domain AFA_11815 IPR010994 RuvA domain 2-like AFA_11815 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AFA_11815 IPR000305 GIY-YIG endonuclease AFA_11820 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AFA_11820 IPR001764 Glycoside hydrolase, family 3, N-terminal AFA_11820 IPR019800 Glycoside hydrolase, family 3, active site AFA_11820 IPR022956 Beta-hexosaminidase, bacterial AFA_11820 IPR017853 Glycoside hydrolase superfamily AFA_11825 IPR037143 4'-phosphopantetheinyl transferase domain superfamily AFA_11825 IPR002582 Holo-[acyl carrier protein] synthase AFA_11825 IPR008278 4'-phosphopantetheinyl transferase domain AFA_11825 IPR004568 Phosphopantetheine-protein transferase domain AFA_11835 IPR029069 HotDog domain superfamily AFA_11835 IPR011973 Phenylacetic acid degradation protein PaaD AFA_11835 IPR003736 Phenylacetic acid degradation-related domain AFA_11835 IPR006683 Thioesterase domain AFA_11840 IPR029045 ClpP/crotonase-like domain superfamily AFA_11840 IPR014748 Enoyl-CoA hydratase, C-terminal AFA_11840 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB AFA_11840 IPR001753 Enoyl-CoA hydratase/isomerase AFA_11845 IPR016161 Aldehyde/histidinol dehydrogenase AFA_11845 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_11845 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_11845 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_11845 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_11845 IPR015590 Aldehyde dehydrogenase domain AFA_11845 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AFA_11850 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_11850 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_11850 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_11850 IPR017938 Riboflavin synthase-like beta-barrel AFA_11850 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit AFA_11850 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_11850 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_11850 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_11850 IPR012675 Beta-grasp domain superfamily AFA_11850 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_11850 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_11855 IPR034904 Fe-S cluster assembly domain superfamily AFA_11855 IPR002744 MIP18 family-like AFA_11855 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AFA_11860 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C AFA_11860 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C AFA_11860 IPR009078 Ferritin-like superfamily AFA_11860 IPR012347 Ferritin-like AFA_11865 IPR009359 Phenylacetic acid degradation B AFA_11865 IPR038693 Phenylacetyl-CoA epoxidase, subunit B AFA_11870 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C AFA_11870 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A AFA_11870 IPR009078 Ferritin-like superfamily AFA_11870 IPR012347 Ferritin-like AFA_11875 IPR012337 Ribonuclease H-like superfamily AFA_11875 IPR013520 Exonuclease, RNase T/DNA polymerase III AFA_11875 IPR036397 Ribonuclease H superfamily AFA_11875 IPR022894 Oligoribonuclease AFA_11880 IPR032456 CAAX prenyl protease 1, N-terminal AFA_11880 IPR001915 Peptidase M48 AFA_11880 IPR027057 CAAX prenyl protease 1 AFA_11885 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal AFA_11885 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AFA_11885 IPR012340 Nucleic acid-binding, OB-fold AFA_11885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11885 IPR004881 Ribosome biogenesis GTPase RsgA AFA_11885 IPR010914 RsgA GTPase domain AFA_11895 IPR008991 Translation protein SH3-like domain superfamily AFA_11895 IPR018257 Ribosomal protein L19, conserved site AFA_11895 IPR038657 Ribosomal protein L19 superfamily AFA_11895 IPR001857 Ribosomal protein L19 AFA_11910 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AFA_11910 IPR024706 Peroxiredoxin, AhpC-type AFA_11910 IPR019479 Peroxiredoxin, C-terminal AFA_11910 IPR013766 Thioredoxin domain AFA_11910 IPR036249 Thioredoxin-like superfamily AFA_11910 IPR022915 Peroxiredoxin, TDXH subfamily AFA_11915 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_11915 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_11915 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_11915 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AFA_11915 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_11915 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_11915 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_11920 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal AFA_11920 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AFA_11920 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AFA_11920 IPR029035 DHS-like NAD/FAD-binding domain superfamily AFA_11920 IPR001308 Electron transfer flavoprotein alpha subunit/FixB AFA_11920 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AFA_11920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_11925 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal AFA_11925 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AFA_11925 IPR012255 Electron transfer flavoprotein, beta subunit AFA_11925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_11925 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AFA_11930 IPR000286 Histone deacetylase family AFA_11930 IPR037138 Histone deacetylase domain superfamily AFA_11930 IPR023696 Ureohydrolase domain superfamily AFA_11930 IPR023801 Histone deacetylase domain AFA_11935 IPR011757 Lytic transglycosylase MltB AFA_11935 IPR031304 Transglycosylase SLT domain 2 AFA_11935 IPR023346 Lysozyme-like domain superfamily AFA_11940 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_11940 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AFA_11940 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_11940 IPR005858 Cysteine synthase CysM AFA_11940 IPR005856 Cysteine synthase AFA_11945 IPR010994 RuvA domain 2-like AFA_11945 IPR003141 Polymerase/histidinol phosphatase, N-terminal AFA_11945 IPR029460 DNA polymerase, helix-hairpin-helix motif AFA_11945 IPR040982 DNA polymerase III alpha subunit finger domain AFA_11945 IPR004013 PHP domain AFA_11945 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain AFA_11945 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AFA_11945 IPR004805 DNA polymerase III, alpha subunit AFA_11945 IPR016195 Polymerase/histidinol phosphatase-like AFA_11950 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase AFA_11950 IPR036291 NAD(P)-binding domain superfamily AFA_11950 IPR001509 NAD-dependent epimerase/dehydratase AFA_11955 IPR029056 Ribokinase-like AFA_11955 IPR011913 RfaE bifunctional protein, domain I AFA_11955 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AFA_11955 IPR011611 Carbohydrate kinase PfkB AFA_11960 IPR019734 Tetratricopeptide repeat AFA_11960 IPR013026 Tetratricopeptide repeat-containing domain AFA_11960 IPR011990 Tetratricopeptide-like helical domain superfamily AFA_11960 IPR041166 LapB, rubredoxin metal binding domain AFA_11960 IPR030865 Lipopolysaccharide assembly protein B AFA_11970 IPR000119 Histone-like DNA-binding protein AFA_11970 IPR005685 Integration host factor, beta subunit AFA_11970 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AFA_11975 IPR000110 Ribosomal protein S1 AFA_11975 IPR003029 S1 domain AFA_11975 IPR012340 Nucleic acid-binding, OB-fold AFA_11975 IPR022967 RNA-binding domain, S1 AFA_11980 IPR011994 Cytidylate kinase domain AFA_11980 IPR003136 Cytidylate kinase AFA_11980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_11985 IPR001986 Enolpyruvate transferase domain AFA_11985 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AFA_11985 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AFA_11985 IPR036968 Enolpyruvate transferase domain superfamily AFA_11985 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AFA_11990 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_11990 IPR002912 ACT domain AFA_11990 IPR036291 NAD(P)-binding domain superfamily AFA_11990 IPR003099 Prephenate dehydrogenase AFA_11995 IPR018528 Prephenate dehydratase, conserved site AFA_11995 IPR001086 Prephenate dehydratase AFA_11995 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain AFA_11995 IPR002701 Chorismate mutase II, prokaryotic-type AFA_11995 IPR002912 ACT domain AFA_11995 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AFA_11995 IPR036263 Chorismate mutase type II superfamily AFA_11995 IPR036979 Chorismate mutase domain superfamily AFA_12000 IPR000192 Aminotransferase class V domain AFA_12000 IPR015424 Pyridoxal phosphate-dependent transferase AFA_12000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_12000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_12000 IPR022278 Phosphoserine aminotransferase AFA_12005 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AFA_12005 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AFA_12005 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AFA_12005 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AFA_12005 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AFA_12005 IPR005743 DNA gyrase, subunit A AFA_12005 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AFA_12010 IPR036737 OmpA-like domain superfamily AFA_12010 IPR006665 OmpA-like domain AFA_12010 IPR006664 Outer membrane protein, bacterial AFA_12010 IPR006690 Outer membrane protein, OmpA-like, conserved site AFA_12015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_12015 IPR010233 Ubiquinone biosynthesis O-methyltransferase AFA_12020 IPR006439 HAD hydrolase, subfamily IA AFA_12020 IPR036412 HAD-like superfamily AFA_12020 IPR023214 HAD superfamily AFA_12020 IPR041492 Haloacid dehalogenase-like hydrolase AFA_12020 IPR037512 Phosphoglycolate phosphatase, prokaryotic AFA_12020 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AFA_12020 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AFA_12025 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12025 IPR036390 Winged helix DNA-binding domain superfamily AFA_12025 IPR005119 LysR, substrate-binding AFA_12025 IPR000847 Transcription regulator HTH, LysR AFA_12035 IPR022569 Ferredoxin, C-terminal AFA_12035 IPR000813 7Fe ferredoxin AFA_12035 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_12035 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_12045 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_12045 IPR039426 Vitamin B12 transporter BtuB-like AFA_12045 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_12045 IPR010916 TonB box, conserved site AFA_12045 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_12045 IPR010917 TonB-dependent receptor, conserved site AFA_12045 IPR012910 TonB-dependent receptor, plug domain AFA_12060 IPR010582 Catalase immune-responsive domain AFA_12060 IPR002226 Catalase haem-binding site AFA_12060 IPR037060 Catalase core domain superfamily AFA_12060 IPR011614 Catalase core domain AFA_12060 IPR018028 Catalase, mono-functional, haem-containing AFA_12060 IPR024708 Catalase active site AFA_12060 IPR020835 Catalase superfamily AFA_12060 IPR029062 Class I glutamine amidotransferase-like AFA_12060 IPR024712 Catalase, mono-functional, haem-containing, clade 2 AFA_12060 IPR041399 Large catalase, C-terminal domain AFA_12070 IPR016024 Armadillo-type fold AFA_12070 IPR021133 HEAT, type 2 AFA_12070 IPR014825 DNA alkylation repair enzyme AFA_12075 IPR036390 Winged helix DNA-binding domain superfamily AFA_12075 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12075 IPR000835 MarR-type HTH domain AFA_12075 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_12080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_12080 IPR004839 Aminotransferase, class I/classII AFA_12080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_12080 IPR015424 Pyridoxal phosphate-dependent transferase AFA_12085 IPR001647 DNA-binding HTH domain, TetR-type AFA_12085 IPR009057 Homeobox-like domain superfamily AFA_12085 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AFA_12110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_12110 IPR000524 Transcription regulator HTH, GntR AFA_12110 IPR004839 Aminotransferase, class I/classII AFA_12110 IPR036390 Winged helix DNA-binding domain superfamily AFA_12110 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12110 IPR015424 Pyridoxal phosphate-dependent transferase AFA_12120 IPR036249 Thioredoxin-like superfamily AFA_12120 IPR004045 Glutathione S-transferase, N-terminal AFA_12120 IPR004046 Glutathione S-transferase, C-terminal AFA_12120 IPR040079 Glutathione Transferase family AFA_12120 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_12120 IPR010987 Glutathione S-transferase, C-terminal-like AFA_12145 IPR008258 Transglycosylase SLT domain 1 AFA_12145 IPR023346 Lysozyme-like domain superfamily AFA_12165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12165 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain AFA_12165 IPR004346 CagE, TrbE, VirB component of type IV transporter system AFA_12190 IPR032710 NTF2-like domain superfamily AFA_12190 IPR007430 Bacterial virulence protein VirB8 AFA_12190 IPR026264 Type IV secretion system protein VirB8/PtlE AFA_12200 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AFA_12200 IPR042217 Type IV secretion system, VirB10/TrbI AFA_12205 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12205 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_12205 IPR001482 Type II/IV secretion system protein AFA_12205 IPR014155 Type IV secretion system protein VirB11 AFA_12245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12245 IPR033186 Helicase HerA-like C-terminal AFA_12250 IPR014059 Conjugative relaxase, N-terminal AFA_12250 IPR014129 Conjugative transfer relaxase protein TraI AFA_12250 IPR009767 DNA helicase, TraI type AFA_12250 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12250 IPR040987 TraI, N-terminal subdomain AFA_12250 IPR040668 TraI, 2B/2B-like domain AFA_12250 IPR014862 TrwC relaxase AFA_12270 IPR012340 Nucleic acid-binding, OB-fold AFA_12270 IPR011344 Single-stranded DNA-binding protein AFA_12270 IPR000424 Primosome PriB/single-strand DNA-binding AFA_12275 IPR004914 Antirestriction protein AFA_12275 IPR042297 Antirestriction domain superfamily AFA_12290 IPR035615 FiwA/Osa AFA_12300 IPR003356 DNA methylase, adenine-specific AFA_12300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_12300 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AFA_12320 IPR002513 Tn3 transposase DDE domain AFA_12320 IPR025296 Domain of unknown function DUF4158 AFA_12325 IPR009057 Homeobox-like domain superfamily AFA_12325 IPR006118 Recombinase, conserved site AFA_12325 IPR006120 Resolvase, HTH domain AFA_12325 IPR006119 Resolvase, N-terminal catalytic domain AFA_12325 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily AFA_12340 IPR003593 AAA+ ATPase domain AFA_12340 IPR003838 ABC transporter permease protein domain AFA_12340 IPR017871 ABC transporter, conserved site AFA_12340 IPR017911 ABC transporter, macrolide export, ATP-binding domain AFA_12340 IPR025857 MacB-like periplasmic core domain AFA_12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12340 IPR003439 ABC transporter-like AFA_12350 IPR022824 Multidrug resistance protein MdtA AFA_12350 IPR006143 RND efflux pump, membrane fusion protein AFA_12350 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AFA_12355 IPR001647 DNA-binding HTH domain, TetR-type AFA_12355 IPR023769 Nucleoid occlusion factor SlmA AFA_12355 IPR009057 Homeobox-like domain superfamily AFA_12355 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AFA_12360 IPR000477 Reverse transcriptase domain AFA_12360 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA AFA_12365 IPR012340 Nucleic acid-binding, OB-fold AFA_12365 IPR002059 Cold-shock protein, DNA-binding AFA_12365 IPR019844 Cold-shock (CSD) domain AFA_12365 IPR011129 Cold shock domain AFA_12365 IPR012156 Cold shock, CspA AFA_12375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12375 IPR006073 GTP binding domain AFA_12385 IPR013762 Integrase-like, catalytic domain superfamily AFA_12385 IPR010998 Integrase/recombinase, N-terminal AFA_12385 IPR004107 Integrase, SAM-like, N-terminal AFA_12385 IPR011010 DNA breaking-rejoining enzyme, catalytic core AFA_12385 IPR023009 Tyrosine recombinase XerC/XerD AFA_12385 IPR002104 Integrase, catalytic domain AFA_12395 IPR001991 Sodium:dicarboxylate symporter AFA_12395 IPR036458 Sodium:dicarboxylate symporter superfamily AFA_12395 IPR023025 Serine/threonine transporter SstT AFA_12400 IPR001123 Amino acid exporter protein, LeuE-type AFA_12400 IPR004778 Homoserine/Threonine efflux protein AFA_12425 IPR038377 Sodium/glucose symporter superfamily AFA_12425 IPR018212 Sodium/solute symporter, conserved site AFA_12425 IPR001734 Sodium/solute symporter AFA_12425 IPR014083 Cation/acetate symporter ActP AFA_12430 IPR001789 Signal transduction response regulator, receiver domain AFA_12430 IPR011006 CheY-like superfamily AFA_12430 IPR000792 Transcription regulator LuxR, C-terminal AFA_12430 IPR016032 Signal transduction response regulator, C-terminal effector AFA_12435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_12435 IPR000014 PAS domain AFA_12435 IPR013767 PAS fold AFA_12435 IPR031967 PhoR, single Cache-like domain AFA_12435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_12435 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_12435 IPR005467 Histidine kinase domain AFA_12435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_12435 IPR035965 PAS domain superfamily AFA_12435 IPR003594 Histidine kinase/HSP90-like ATPase AFA_12440 IPR015947 PUA-like superfamily AFA_12440 IPR024951 Sulphate adenylyltransferase catalytic domain AFA_12440 IPR002650 Sulphate adenylyltransferase AFA_12440 IPR025980 ATP-sulfurylase PUA-like domain AFA_12440 IPR020792 Sulphate adenylyltransferase, prokaryotic-type AFA_12440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_12445 IPR036259 MFS transporter superfamily AFA_12445 IPR011701 Major facilitator superfamily AFA_12445 IPR020846 Major facilitator superfamily domain AFA_12455 IPR000847 Transcription regulator HTH, LysR AFA_12455 IPR005119 LysR, substrate-binding AFA_12455 IPR036390 Winged helix DNA-binding domain superfamily AFA_12455 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12460 IPR030374 Polyamine biosynthesis domain AFA_12460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_12460 IPR035246 Spermidine synthase, tetramerisation domain AFA_12460 IPR001045 Spermidine/spermine synthases AFA_12460 IPR037163 Spermidine synthase, tetramerisation domain superfamily AFA_12465 IPR005467 Histidine kinase domain AFA_12465 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_12465 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_12465 IPR003594 Histidine kinase/HSP90-like ATPase AFA_12465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_12465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_12470 IPR039420 Transcriptional regulatory protein WalR-like AFA_12470 IPR011006 CheY-like superfamily AFA_12470 IPR001789 Signal transduction response regulator, receiver domain AFA_12470 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_12470 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12475 IPR000014 PAS domain AFA_12475 IPR004090 Chemotaxis methyl-accepting receptor AFA_12475 IPR003660 HAMP domain AFA_12475 IPR013655 PAS fold-3 AFA_12475 IPR035965 PAS domain superfamily AFA_12475 IPR001610 PAC motif AFA_12475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AFA_12480 IPR001727 Gdt1 family AFA_12490 IPR005119 LysR, substrate-binding AFA_12490 IPR000847 Transcription regulator HTH, LysR AFA_12490 IPR036390 Winged helix DNA-binding domain superfamily AFA_12490 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12495 IPR003680 Flavodoxin-like fold AFA_12495 IPR029039 Flavoprotein-like superfamily AFA_12495 IPR023048 NADH-azoreductase, FMN-dependent AFA_12500 IPR032677 GTP cyclohydrolase II AFA_12500 IPR036144 RibA-like superfamily AFA_12500 IPR000926 GTP cyclohydrolase II, RibA AFA_12515 IPR011009 Protein kinase-like domain superfamily AFA_12515 IPR010232 Probable protein kinase UbiB AFA_12515 IPR004147 UbiB domain AFA_12520 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AFA_12530 IPR002187 Nitrogen regulatory protein PII AFA_12530 IPR017918 Nitrogen regulatory protein PII, conserved site AFA_12530 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AFA_12530 IPR002332 Nitrogen regulatory protein P-II, urydylation site AFA_12530 IPR011322 Nitrogen regulatory PII-like, alpha/beta AFA_12535 IPR024041 Ammonium transporter AmtB-like domain AFA_12535 IPR018047 Ammonium transporter, conserved site AFA_12535 IPR001905 Ammonium transporter AFA_12535 IPR029020 Ammonium/urea transporter AFA_12540 IPR012127 Cytochrome c prime AFA_12540 IPR002321 Cytochrome c, class II AFA_12540 IPR010980 Cytochrome c/b562 AFA_12540 IPR015984 Cytochrome c prime, subgroup AFA_12545 IPR013539 Adenylosuccinate lyase PurB, C-terminal AFA_12545 IPR024083 Fumarase/histidase, N-terminal AFA_12545 IPR004769 Adenylosuccinate lyase AFA_12545 IPR008948 L-Aspartase-like AFA_12545 IPR022761 Fumarate lyase, N-terminal AFA_12545 IPR000362 Fumarate lyase family AFA_12545 IPR020557 Fumarate lyase, conserved site AFA_12550 IPR004046 Glutathione S-transferase, C-terminal AFA_12550 IPR010987 Glutathione S-transferase, C-terminal-like AFA_12550 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_12550 IPR036249 Thioredoxin-like superfamily AFA_12550 IPR034343 Uncharacterized GST-like protein YibF AFA_12550 IPR004045 Glutathione S-transferase, N-terminal AFA_12560 IPR013094 Alpha/beta hydrolase fold-3 AFA_12560 IPR029058 Alpha/Beta hydrolase fold AFA_12560 IPR033140 Lipase, GDXG, putative serine active site AFA_12565 IPR002781 Transmembrane protein TauE-like AFA_12570 IPR023382 Adenine nucleotide alpha hydrolase-like domains AFA_12570 IPR004506 tRNA-specific 2-thiouridylase AFA_12570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_12575 IPR016166 FAD-binding domain, PCMH-type AFA_12575 IPR016164 FAD-linked oxidase-like, C-terminal AFA_12575 IPR004113 FAD-linked oxidase, C-terminal AFA_12575 IPR004490 Glycolate oxidase subunit GlcD AFA_12575 IPR006094 FAD linked oxidase, N-terminal AFA_12575 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AFA_12575 IPR036318 FAD-binding, type PCMH-like superfamily AFA_12580 IPR006218 DAHP synthetase I/KDSA AFA_12580 IPR006219 DHAP synthase, class 1 AFA_12580 IPR013785 Aldolase-type TIM barrel AFA_12585 IPR007423 Selenoprotein, putative AFA_12590 IPR003706 CstA, N-terminal domain AFA_12590 IPR025299 CstA, C-terminal domain AFA_12595 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB AFA_12595 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_12600 IPR035906 MetI-like superfamily AFA_12600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_12600 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_12600 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC AFA_12605 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_12605 IPR035906 MetI-like superfamily AFA_12605 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD AFA_12605 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_12610 IPR003439 ABC transporter-like AFA_12610 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AFA_12610 IPR003593 AAA+ ATPase domain AFA_12610 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein AFA_12610 IPR017871 ABC transporter, conserved site AFA_12610 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12625 IPR012774 Ectoine dioxygenase AFA_12625 IPR008775 Phytanoyl-CoA dioxygenase AFA_12630 IPR010462 Ectoine synthase AFA_12630 IPR014710 RmlC-like jelly roll fold AFA_12630 IPR011051 RmlC-like cupin domain superfamily AFA_12635 IPR004637 2,4-diaminobutyrate 4-transaminase AFA_12635 IPR012773 Ectoine biosynthetic protein AFA_12635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_12635 IPR005814 Aminotransferase class-III AFA_12635 IPR015424 Pyridoxal phosphate-dependent transferase AFA_12635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_12640 IPR016181 Acyl-CoA N-acyltransferase AFA_12640 IPR000182 GNAT domain AFA_12640 IPR012772 L-2,4-diaminobutyric acid acetyltransferase AFA_12645 IPR036390 Winged helix DNA-binding domain superfamily AFA_12645 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12645 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_12645 IPR000835 MarR-type HTH domain AFA_12655 IPR000620 EamA domain AFA_12660 IPR035068 Metalloprotease TldD/PmbA, N-terminal AFA_12660 IPR025502 TldD AFA_12660 IPR002510 Metalloprotease TldD/PmbA AFA_12660 IPR036059 Metalloprotease TldD/PmbA superfamily AFA_12665 IPR001801 Histone-like protein H-NS AFA_12665 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily AFA_12665 IPR027444 Histone-like protein H-NS, C-terminal domain AFA_12675 IPR014782 Peptidase M1, membrane alanine aminopeptidase AFA_12675 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AFA_12675 IPR012779 Peptidase M1, alanyl aminopeptidase AFA_12675 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AFA_12675 IPR042097 Aminopeptidase N-like , N-terminal AFA_12675 IPR027268 Peptidase M4/M1, CTD superfamily AFA_12675 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AFA_12675 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AFA_12675 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AFA_12680 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal AFA_12680 IPR000146 Fructose-1,6-bisphosphatase class 1 AFA_12680 IPR028343 Fructose-1,6-bisphosphatase AFA_12685 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AFA_12685 IPR011032 GroES-like superfamily AFA_12685 IPR020843 Polyketide synthase, enoylreductase domain AFA_12685 IPR036291 NAD(P)-binding domain superfamily AFA_12685 IPR013154 Alcohol dehydrogenase, N-terminal AFA_12685 IPR013149 Alcohol dehydrogenase, C-terminal AFA_12695 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AFA_12695 IPR024084 Isopropylmalate dehydrogenase-like domain AFA_12695 IPR011829 Tartrate dehydrogenase AFA_12700 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AFA_12700 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AFA_12700 IPR023514 Glyoxylate/hydroxypyruvate reductase A AFA_12700 IPR036291 NAD(P)-binding domain superfamily AFA_12705 IPR033186 Helicase HerA-like C-terminal AFA_12705 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12710 IPR026564 Transcriptional regulator TACO1-like, domain 3 AFA_12710 IPR029072 YebC-like AFA_12710 IPR002876 Transcriptional regulator TACO1-like AFA_12710 IPR017856 Integrase-like, N-terminal AFA_12715 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AFA_12715 IPR011054 Rudiment single hybrid motif AFA_12715 IPR016185 Pre-ATP-grasp domain superfamily AFA_12715 IPR011761 ATP-grasp fold AFA_12715 IPR013815 ATP-grasp fold, subdomain 1 AFA_12715 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AFA_12715 IPR000115 Phosphoribosylglycinamide synthetase AFA_12715 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AFA_12715 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily AFA_12720 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily AFA_12720 IPR001260 Coproporphyrinogen III oxidase, aerobic AFA_12720 IPR018375 Coproporphyrinogen III oxidase, conserved site AFA_12725 IPR004821 Cytidyltransferase-like domain AFA_12725 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase AFA_12725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_12730 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AFA_12735 IPR003742 RNA methyltransferase RlmH AFA_12735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AFA_12735 IPR029028 Alpha/beta knot methyltransferases AFA_12740 IPR029001 Inosine triphosphate pyrophosphatase-like AFA_12740 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AFA_12745 IPR033954 Disulphide bond isomerase, DsbC/G AFA_12745 IPR012336 Thioredoxin-like fold AFA_12745 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily AFA_12745 IPR036249 Thioredoxin-like superfamily AFA_12760 IPR001950 SUI1 domain AFA_12760 IPR036877 SUI1 domain superfamily AFA_12760 IPR005872 Archaeal/bacterial translation initiation factor SUI1 AFA_12770 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AFA_12770 IPR036291 NAD(P)-binding domain superfamily AFA_12770 IPR006398 2-hydroxy-3-oxopropionate reductase AFA_12770 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_12770 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_12770 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AFA_12770 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AFA_12770 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AFA_12775 IPR034333 Glutathione S-transferases, class Zeta , N-terminal AFA_12775 IPR004045 Glutathione S-transferase, N-terminal AFA_12775 IPR036249 Thioredoxin-like superfamily AFA_12775 IPR034330 Glutathione S-transferases, class Zeta , C-terminal AFA_12775 IPR040079 Glutathione Transferase family AFA_12775 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_12775 IPR005955 Glutathione S-transferases, class Zeta AFA_12775 IPR010987 Glutathione S-transferase, C-terminal-like AFA_12775 IPR004046 Glutathione S-transferase, C-terminal AFA_12780 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AFA_12785 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AFA_12790 IPR037518 MPN domain AFA_12790 IPR025657 RadC-like JAB domain AFA_12790 IPR010994 RuvA domain 2-like AFA_12790 IPR001405 Uncharacterised protein family UPF0758 AFA_12795 IPR042105 Ribosomal protein L31 superfamily AFA_12795 IPR034704 L28p-like AFA_12795 IPR002150 Ribosomal protein L31 AFA_12795 IPR027493 Ribosomal protein L31 type B AFA_12805 IPR002528 Multi antimicrobial extrusion protein AFA_12810 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12810 IPR003439 ABC transporter-like AFA_12810 IPR003593 AAA+ ATPase domain AFA_12810 IPR005892 Glycine betaine transport ATP-binding subunit AFA_12810 IPR000644 CBS domain AFA_12810 IPR017871 ABC transporter, conserved site AFA_12815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_12815 IPR035906 MetI-like superfamily AFA_12825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_12825 IPR003333 Mycolic acid cyclopropane synthase AFA_12830 IPR004734 Multidrug resistance protein AFA_12830 IPR036259 MFS transporter superfamily AFA_12830 IPR020846 Major facilitator superfamily domain AFA_12830 IPR011701 Major facilitator superfamily AFA_12830 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AFA_12835 IPR034704 L28p-like AFA_12835 IPR026569 Ribosomal protein L28/L24 AFA_12835 IPR037147 Ribosomal protein L28/L24 superfamily AFA_12835 IPR001383 Ribosomal protein L28 AFA_12840 IPR038584 Ribosomal protein L33 superfamily AFA_12840 IPR001705 Ribosomal protein L33 AFA_12840 IPR011332 Zinc-binding ribosomal protein AFA_12845 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_12845 IPR002300 Aminoacyl-tRNA synthetase, class Ia AFA_12845 IPR002302 Leucine-tRNA ligase AFA_12845 IPR025709 Leucyl-tRNA synthetase, editing domain AFA_12845 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AFA_12845 IPR015413 Methionyl/Leucyl tRNA synthetase AFA_12845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_12845 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AFA_12845 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AFA_12855 IPR010372 DNA polymerase III delta, N-terminal AFA_12855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12855 IPR032780 DNA polymerase III subunit delta, C-terminal AFA_12855 IPR005790 DNA polymerase III, delta subunit AFA_12855 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AFA_12860 IPR015590 Aldehyde dehydrogenase domain AFA_12860 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AFA_12860 IPR012134 Glutamate-5-semialdehyde dehydrogenase AFA_12860 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_12860 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_12860 IPR000965 GPR domain AFA_12860 IPR016161 Aldehyde/histidinol dehydrogenase AFA_12870 IPR004114 THUMP domain AFA_12870 IPR000241 Putative RNA methylase domain AFA_12870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_12870 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AFA_12880 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AFA_12880 IPR000397 Heat shock protein Hsp33 AFA_12880 IPR016154 Heat shock protein Hsp33, C-terminal AFA_12880 IPR016153 Heat shock protein Hsp33, N-terminal AFA_12890 IPR007060 Septum formation initiator FtsL/DivIC AFA_12890 IPR023081 Cell division protein FtsB AFA_12895 IPR036849 Enolase-like, C-terminal domain superfamily AFA_12895 IPR000941 Enolase AFA_12895 IPR029017 Enolase-like, N-terminal AFA_12895 IPR020811 Enolase, N-terminal AFA_12895 IPR020810 Enolase, C-terminal TIM barrel domain AFA_12895 IPR020809 Enolase, conserved site AFA_12905 IPR004638 Drug resistance transporter EmrB-like AFA_12905 IPR036259 MFS transporter superfamily AFA_12905 IPR011701 Major facilitator superfamily AFA_12905 IPR020846 Major facilitator superfamily domain AFA_12920 IPR006218 DAHP synthetase I/KDSA AFA_12920 IPR013785 Aldolase-type TIM barrel AFA_12920 IPR006269 3-deoxy-8-phosphooctulonate synthase AFA_12925 IPR017456 CTP synthase, N-terminal AFA_12925 IPR004468 CTP synthase AFA_12925 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_12925 IPR017926 Glutamine amidotransferase AFA_12925 IPR029062 Class I glutamine amidotransferase-like AFA_12925 IPR033828 CTP synthase GATase domain AFA_12930 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AFA_12930 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AFA_12930 IPR036005 Creatinase/aminopeptidase-like AFA_12930 IPR000994 Peptidase M24 AFA_12930 IPR000587 Creatinase, N-terminal AFA_12935 IPR037171 NagB/RpiA transferase-like AFA_12935 IPR004164 Coenzyme A transferase active site AFA_12935 IPR004165 Coenzyme A transferase family I AFA_12935 IPR012791 3-oxoacid CoA-transferase, subunit B AFA_12940 IPR012792 3-oxoacid CoA-transferase, subunit A AFA_12940 IPR004165 Coenzyme A transferase family I AFA_12940 IPR004163 Coenzyme A transferase binding site AFA_12940 IPR037171 NagB/RpiA transferase-like AFA_12950 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase AFA_12950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_12950 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_12955 IPR000620 EamA domain AFA_12960 IPR042099 AMP-dependent synthetase-like superfamily AFA_12960 IPR011904 Acetate-CoA ligase AFA_12960 IPR000873 AMP-dependent synthetase/ligase AFA_12960 IPR020845 AMP-binding, conserved site AFA_12960 IPR025110 AMP-binding enzyme, C-terminal domain AFA_12960 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AFA_12970 IPR038765 Papain-like cysteine peptidase superfamily AFA_12970 IPR000064 Endopeptidase, NLPC/P60 domain AFA_12980 IPR036390 Winged helix DNA-binding domain superfamily AFA_12980 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12980 IPR000847 Transcription regulator HTH, LysR AFA_12980 IPR005119 LysR, substrate-binding AFA_12980 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain AFA_12985 IPR015590 Aldehyde dehydrogenase domain AFA_12985 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_12985 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_12985 IPR016161 Aldehyde/histidinol dehydrogenase AFA_12985 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_12985 IPR010061 Methylmalonate-semialdehyde dehydrogenase AFA_12990 IPR036390 Winged helix DNA-binding domain superfamily AFA_12990 IPR005119 LysR, substrate-binding AFA_12990 IPR000847 Transcription regulator HTH, LysR AFA_12990 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_12995 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_12995 IPR039423 TonB-dependent receptor-like AFA_12995 IPR010105 TonB-dependent siderophore receptor AFA_12995 IPR012910 TonB-dependent receptor, plug domain AFA_12995 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_12995 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_12995 IPR010916 TonB box, conserved site AFA_13005 IPR037294 ABC transporter, BtuC-like AFA_13005 IPR000522 ABC transporter, permease protein, BtuC-like AFA_13010 IPR003593 AAA+ ATPase domain AFA_13010 IPR015863 ABC transporter, hemin import, HmuV AFA_13010 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13010 IPR003439 ABC transporter-like AFA_13020 IPR041347 MftR, C-terminal AFA_13020 IPR001647 DNA-binding HTH domain, TetR-type AFA_13020 IPR009057 Homeobox-like domain superfamily AFA_13020 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AFA_13030 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AFA_13030 IPR023042 Peptidase M17, leucine aminopeptidase AFA_13030 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AFA_13030 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AFA_13040 IPR006214 Bax inhibitor 1-related AFA_13045 IPR011004 Trimeric LpxA-like superfamily AFA_13045 IPR042122 Serine acetyltransferase, N-terminal domain superfamily AFA_13045 IPR001451 Hexapeptide repeat AFA_13050 IPR004626 RarD protein AFA_13060 IPR037278 ARFGAP/RecO-like zinc finger AFA_13060 IPR022572 DNA replication/recombination mediator RecO, N-terminal AFA_13060 IPR012340 Nucleic acid-binding, OB-fold AFA_13060 IPR003717 Recombination protein O, RecO AFA_13065 IPR006073 GTP binding domain AFA_13065 IPR009019 K homology domain superfamily, prokaryotic type AFA_13065 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13065 IPR004044 K Homology domain, type 2 AFA_13065 IPR030388 Era-type guanine nucleotide-binding (G) domain AFA_13065 IPR015946 K homology domain-like, alpha/beta AFA_13065 IPR005662 GTP-binding protein Era AFA_13065 IPR005225 Small GTP-binding protein domain AFA_13070 IPR014720 Double-stranded RNA-binding domain AFA_13070 IPR036389 Ribonuclease III, endonuclease domain superfamily AFA_13070 IPR000999 Ribonuclease III domain AFA_13070 IPR011907 Ribonuclease III AFA_13075 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AFA_13075 IPR019533 Peptidase S26 AFA_13075 IPR036286 LexA/Signal peptidase-like superfamily AFA_13075 IPR019758 Peptidase S26A, signal peptidase I, conserved site AFA_13075 IPR000223 Peptidase S26A, signal peptidase I AFA_13075 IPR019756 Peptidase S26A, signal peptidase I, serine active site AFA_13080 IPR035647 EF-G domain III/V-like AFA_13080 IPR000640 Elongation factor EFG, domain V-like AFA_13080 IPR004161 Translation elongation factor EFTu-like, domain 2 AFA_13080 IPR031157 Tr-type G domain, conserved site AFA_13080 IPR006297 Elongation factor 4 AFA_13080 IPR013842 GTP-binding protein LepA, C-terminal AFA_13080 IPR038363 LepA, C-terminal domain superfamily AFA_13080 IPR035654 Elongation factor 4, domain IV AFA_13080 IPR009000 Translation protein, beta-barrel domain superfamily AFA_13080 IPR000795 Transcription factor, GTP-binding domain AFA_13080 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13080 IPR005225 Small GTP-binding protein domain AFA_13085 IPR001478 PDZ domain AFA_13085 IPR036034 PDZ superfamily AFA_13085 IPR001940 Peptidase S1C AFA_13085 IPR011782 Peptidase S1C, Do AFA_13085 IPR009003 Peptidase S1, PA clan AFA_13100 IPR039425 RNA polymerase sigma-70 like AFA_13100 IPR007627 RNA polymerase sigma-70 region 2 AFA_13100 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AFA_13100 IPR014284 RNA polymerase sigma-70 like domain AFA_13100 IPR013325 RNA polymerase sigma factor, region 2 AFA_13100 IPR014286 RNA polymerase sigma-70 RpoE type AFA_13100 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13100 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_13100 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AFA_13110 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AFA_13110 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AFA_13110 IPR014031 Beta-ketoacyl synthase, C-terminal AFA_13110 IPR014030 Beta-ketoacyl synthase, N-terminal AFA_13110 IPR018201 Beta-ketoacyl synthase, active site AFA_13110 IPR016039 Thiolase-like AFA_13110 IPR000794 Beta-ketoacyl synthase AFA_13115 IPR006162 Phosphopantetheine attachment site AFA_13115 IPR036736 ACP-like superfamily AFA_13115 IPR003231 Acyl carrier protein (ACP) AFA_13115 IPR009081 Phosphopantetheine binding ACP domain AFA_13120 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_13120 IPR036291 NAD(P)-binding domain superfamily AFA_13120 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_13120 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_13125 IPR014043 Acyl transferase AFA_13125 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AFA_13125 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AFA_13125 IPR001227 Acyl transferase domain superfamily AFA_13125 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AFA_13125 IPR024925 Malonyl CoA-acyl carrier protein transacylase AFA_13130 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AFA_13130 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AFA_13130 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AFA_13130 IPR016039 Thiolase-like AFA_13135 IPR012281 Phospholipid biosynthesis protein, PlsX-like AFA_13135 IPR003664 Fatty acid synthesis PlsX protein AFA_13140 IPR002677 Ribosomal protein L32p AFA_13140 IPR011332 Zinc-binding ribosomal protein AFA_13145 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AFA_13145 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria AFA_13150 IPR029001 Inosine triphosphate pyrophosphatase-like AFA_13150 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AFA_13155 IPR000878 Tetrapyrrole methylase AFA_13155 IPR014777 Tetrapyrrole methylase, subdomain 1 AFA_13155 IPR035996 Tetrapyrrole methylase superfamily AFA_13155 IPR014776 Tetrapyrrole methylase, subdomain 2 AFA_13155 IPR008189 rRNA small subunit methyltransferase I AFA_13155 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AFA_13160 IPR036366 PGBD superfamily AFA_13160 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AFA_13160 IPR036365 PGBD-like superfamily AFA_13160 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily AFA_13165 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ AFA_13165 IPR013130 Ferric reductase transmembrane component-like domain AFA_13170 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily AFA_13170 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_13170 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AFA_13170 IPR000572 Oxidoreductase, molybdopterin-binding domain AFA_13170 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP AFA_13175 IPR006439 HAD hydrolase, subfamily IA AFA_13175 IPR041492 Haloacid dehalogenase-like hydrolase AFA_13175 IPR023214 HAD superfamily AFA_13175 IPR037512 Phosphoglycolate phosphatase, prokaryotic AFA_13175 IPR036412 HAD-like superfamily AFA_13175 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AFA_13175 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AFA_13180 IPR002942 RNA-binding S4 domain AFA_13180 IPR020103 Pseudouridine synthase, catalytic domain superfamily AFA_13180 IPR036986 RNA-binding S4 domain superfamily AFA_13180 IPR006145 Pseudouridine synthase, RsuA/RluA AFA_13180 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AFA_13180 IPR006225 Pseudouridine synthase, RluC/RluD AFA_13185 IPR003029 S1 domain AFA_13185 IPR022967 RNA-binding domain, S1 AFA_13185 IPR028878 Ribonuclease E AFA_13185 IPR004659 Ribonuclease E/G AFA_13185 IPR012340 Nucleic acid-binding, OB-fold AFA_13185 IPR021968 Polyribonucleotide phosphorylase C-terminal AFA_13185 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AFA_13190 IPR041010 Acetyl-coA carboxylase zinc finger domain AFA_13190 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AFA_13190 IPR029045 ClpP/crotonase-like domain superfamily AFA_13190 IPR034733 Acetyl-CoA carboxylase AFA_13190 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AFA_13195 IPR018204 Tryptophan synthase, alpha chain, active site AFA_13195 IPR013785 Aldolase-type TIM barrel AFA_13195 IPR011060 Ribulose-phosphate binding barrel AFA_13195 IPR002028 Tryptophan synthase, alpha chain AFA_13200 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_13200 IPR023026 Tryptophan synthase beta chain/beta chain-like AFA_13200 IPR006653 Tryptophan synthase, beta chain, conserved site AFA_13200 IPR006654 Tryptophan synthase, beta chain AFA_13200 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_13205 IPR007685 RelA/SpoT AFA_13205 IPR003607 HD/PDEase domain AFA_13205 IPR004095 TGS AFA_13205 IPR012675 Beta-grasp domain superfamily AFA_13205 IPR002912 ACT domain AFA_13205 IPR004811 RelA/SpoT family AFA_13205 IPR012676 TGS-like AFA_13205 IPR033655 RelA, TGS domain AFA_13215 IPR007229 Nicotinate phosphoribosyltransferase family AFA_13215 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain AFA_13215 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase AFA_13215 IPR006406 Nicotinate phosphoribosyltransferase AFA_13215 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AFA_13220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_13220 IPR000813 7Fe ferredoxin AFA_13220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_13220 IPR022569 Ferredoxin, C-terminal AFA_13230 IPR007202 4Fe-4S domain AFA_13230 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria AFA_13230 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_13230 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB AFA_13230 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_13235 IPR011257 DNA glycosylase AFA_13235 IPR003265 HhH-GPD domain AFA_13235 IPR004035 Endonuclease III, iron-sulphur binding site AFA_13235 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AFA_13235 IPR005759 Endonuclease III AFA_13235 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AFA_13235 IPR004036 Endonuclease III-like, conserved site-2 AFA_13235 IPR000445 Helix-hairpin-helix motif AFA_13240 IPR003593 AAA+ ATPase domain AFA_13240 IPR003838 ABC transporter permease protein domain AFA_13240 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13240 IPR025857 MacB-like periplasmic core domain AFA_13240 IPR017911 ABC transporter, macrolide export, ATP-binding domain AFA_13240 IPR017871 ABC transporter, conserved site AFA_13240 IPR003439 ABC transporter-like AFA_13245 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AFA_13245 IPR005618 Outer membrane protein, OmpW AFA_13250 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_13250 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13250 IPR017871 ABC transporter, conserved site AFA_13250 IPR003439 ABC transporter-like AFA_13250 IPR003593 AAA+ ATPase domain AFA_13255 IPR003439 ABC transporter-like AFA_13255 IPR003593 AAA+ ATPase domain AFA_13255 IPR017871 ABC transporter, conserved site AFA_13255 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_13255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13270 IPR011057 Mss4-like superfamily AFA_13270 IPR002579 Peptide methionine sulphoxide reductase MrsB AFA_13270 IPR028427 Peptide methionine sulfoxide reductase AFA_13275 IPR006008 Intracellular septation protein A AFA_13285 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AFA_13285 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AFA_13290 IPR013839 NAD-dependent DNA ligase, adenylation AFA_13290 IPR013840 NAD-dependent DNA ligase, N-terminal AFA_13290 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AFA_13290 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type AFA_13290 IPR001679 NAD-dependent DNA ligase AFA_13290 IPR033136 NAD-dependent DNA ligase, conserved site AFA_13290 IPR018239 NAD-dependent DNA ligase, active site AFA_13290 IPR012340 Nucleic acid-binding, OB-fold AFA_13290 IPR004150 NAD-dependent DNA ligase, OB-fold AFA_13290 IPR001357 BRCT domain AFA_13290 IPR036420 BRCT domain superfamily AFA_13290 IPR010994 RuvA domain 2-like AFA_13290 IPR041663 DisA/LigA, helix-hairpin-helix motif AFA_13300 IPR003395 RecF/RecN/SMC, N-terminal AFA_13300 IPR024704 Structural maintenance of chromosomes protein AFA_13300 IPR010935 SMCs flexible hinge AFA_13300 IPR036277 SMCs flexible hinge superfamily AFA_13300 IPR011890 Structural maintenance of chromosomes protein, prokaryotic AFA_13300 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13305 IPR036259 MFS transporter superfamily AFA_13305 IPR011701 Major facilitator superfamily AFA_13305 IPR023727 Lysophospholipid transporter LplT AFA_13310 IPR036895 Uracil-DNA glycosylase-like domain superfamily AFA_13310 IPR005122 Uracil-DNA glycosylase-like AFA_13310 IPR005273 Uracil-DNA glycosylase family 4 AFA_13315 IPR000905 Gcp-like domain AFA_13315 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB AFA_13320 IPR039420 Transcriptional regulatory protein WalR-like AFA_13320 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13320 IPR001789 Signal transduction response regulator, receiver domain AFA_13320 IPR016032 Signal transduction response regulator, C-terminal effector AFA_13320 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_13320 IPR011006 CheY-like superfamily AFA_13325 IPR003594 Histidine kinase/HSP90-like ATPase AFA_13325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_13325 IPR003660 HAMP domain AFA_13325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_13325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_13325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_13325 IPR005467 Histidine kinase domain AFA_13330 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily AFA_13330 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site AFA_13330 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase AFA_13335 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AFA_13335 IPR034683 Cytidylyltransferase IspD/TarI AFA_13335 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site AFA_13335 IPR029044 Nucleotide-diphospho-sugar transferases AFA_13340 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_13340 IPR001650 Helicase, C-terminal AFA_13340 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13340 IPR041471 UvrB, interaction domain AFA_13340 IPR037235 TRCF-like, C-terminal domain AFA_13340 IPR005118 Transcription-repair-coupling factor, C-terminal domain AFA_13340 IPR011545 DEAD/DEAH box helicase domain AFA_13340 IPR004576 Transcription-repair coupling factor AFA_13340 IPR036101 CarD-like/TRCF domain superfamily AFA_13340 IPR003711 CarD-like/TRCF domain AFA_13350 IPR036412 HAD-like superfamily AFA_13350 IPR023214 HAD superfamily AFA_13355 IPR004136 Nitronate monooxygenase AFA_13355 IPR013785 Aldolase-type TIM barrel AFA_13365 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AFA_13365 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AFA_13370 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal AFA_13370 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AFA_13370 IPR003918 NADH:ubiquinone oxidoreductase AFA_13370 IPR010227 NADH-quinone oxidoreductase, chain M/4 AFA_13375 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AFA_13375 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AFA_13375 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AFA_13375 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AFA_13380 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K AFA_13380 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AFA_13385 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ AFA_13385 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 AFA_13390 IPR010226 NADH-quinone oxidoreductase, chain I AFA_13390 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_13390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_13395 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AFA_13395 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AFA_13400 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AFA_13400 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site AFA_13400 IPR010228 NADH:ubiquinone oxidoreductase, subunit G AFA_13400 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AFA_13400 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal AFA_13400 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_13400 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_13400 IPR006656 Molybdopterin oxidoreductase AFA_13405 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AFA_13405 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AFA_13405 IPR019554 Soluble ligand binding domain AFA_13405 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AFA_13405 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AFA_13405 IPR011537 NADH ubiquinone oxidoreductase, F subunit AFA_13405 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AFA_13410 IPR036249 Thioredoxin-like superfamily AFA_13410 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal AFA_13410 IPR042128 NuoE domain AFA_13410 IPR002023 NADH-quinone oxidoreductase subunit E-like AFA_13415 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H AFA_13415 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site AFA_13415 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily AFA_13415 IPR001135 NADH-quinone oxidoreductase, subunit D AFA_13415 IPR029014 [NiFe]-hydrogenase, large subunit AFA_13420 IPR010218 NADH dehydrogenase, subunit C AFA_13420 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily AFA_13420 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit AFA_13420 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site AFA_13425 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AFA_13425 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AFA_13430 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily AFA_13430 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid AFA_13430 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 AFA_13435 IPR002299 Porin, Neisseria sp. type AFA_13435 IPR001702 Porin, Gram-negative type AFA_13435 IPR023614 Porin domain superfamily AFA_13435 IPR033900 Porin domain, Gram-negative type AFA_13445 IPR004692 Preprotein translocase SecG subunit AFA_13450 IPR035990 Triosephosphate isomerase superfamily AFA_13450 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AFA_13450 IPR000652 Triosephosphate isomerase AFA_13450 IPR020861 Triosephosphate isomerase, active site AFA_13450 IPR013785 Aldolase-type TIM barrel AFA_13455 IPR011032 GroES-like superfamily AFA_13455 IPR020843 Polyketide synthase, enoylreductase domain AFA_13455 IPR013149 Alcohol dehydrogenase, C-terminal AFA_13455 IPR036291 NAD(P)-binding domain superfamily AFA_13455 IPR013154 Alcohol dehydrogenase, N-terminal AFA_13475 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AFA_13475 IPR027408 PNPase/RNase PH domain superfamily AFA_13475 IPR012162 Polyribonucleotide nucleotidyltransferase AFA_13475 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_13475 IPR022967 RNA-binding domain, S1 AFA_13475 IPR003029 S1 domain AFA_13475 IPR012340 Nucleic acid-binding, OB-fold AFA_13475 IPR036612 K Homology domain, type 1 superfamily AFA_13475 IPR004088 K Homology domain, type 1 AFA_13475 IPR004087 K Homology domain AFA_13475 IPR036345 Exoribonuclease, PH domain 2 superfamily AFA_13475 IPR001247 Exoribonuclease, phosphorolytic domain 1 AFA_13475 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AFA_13475 IPR015847 Exoribonuclease, phosphorolytic domain 2 AFA_13480 IPR000589 Ribosomal protein S15 AFA_13480 IPR005290 Ribosomal protein S15, bacterial-type AFA_13480 IPR009068 S15/NS1, RNA-binding AFA_13485 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AFA_13485 IPR000462 CDP-alcohol phosphatidyltransferase AFA_13490 IPR036291 NAD(P)-binding domain superfamily AFA_13490 IPR013116 Ketol-acid reductoisomerase, N-terminal AFA_13490 IPR013023 Ketol-acid reductoisomerase AFA_13490 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_13490 IPR014359 Ketol-acid reductoisomerase, prokaryotic AFA_13490 IPR000506 Ketol-acid reductoisomerase, C-terminal AFA_13495 IPR004789 Acetolactate synthase, small subunit AFA_13495 IPR019455 Acetolactate synthase, small subunit, C-terminal AFA_13495 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AFA_13495 IPR002912 ACT domain AFA_13495 IPR039557 AHAS, ACT domain AFA_13500 IPR029035 DHS-like NAD/FAD-binding domain superfamily AFA_13500 IPR039368 Acetolactate synthase large subunit, TPP binding domain AFA_13500 IPR029061 Thiamin diphosphate-binding fold AFA_13500 IPR012000 Thiamine pyrophosphate enzyme, central domain AFA_13500 IPR012846 Acetolactate synthase, large subunit, biosynthetic AFA_13500 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AFA_13500 IPR000399 TPP-binding enzyme, conserved site AFA_13500 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AFA_13505 IPR032692 Integral membrane protein YccS, N-terminal AFA_13510 IPR005583 Peroxide stress protein YaaA AFA_13515 IPR011294 3-hydroxybutyrate dehydrogenase AFA_13515 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_13515 IPR036291 NAD(P)-binding domain superfamily AFA_13515 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_13525 IPR012338 Beta-lactamase/transpeptidase-like AFA_13525 IPR001586 Beta-lactamase, class-C active site AFA_13525 IPR001466 Beta-lactamase-related AFA_13540 IPR002317 Serine-tRNA ligase, type1 AFA_13540 IPR006195 Aminoacyl-tRNA synthetase, class II AFA_13540 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AFA_13540 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AFA_13540 IPR033729 Serine-tRNA ligase catalytic core domain AFA_13540 IPR015866 Serine-tRNA synthetase, type1, N-terminal AFA_13540 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily AFA_13545 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AFA_13545 IPR003593 AAA+ ATPase domain AFA_13545 IPR003959 ATPase, AAA-type, core AFA_13545 IPR021886 MgsA AAA+ ATPase C-terminal AFA_13545 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13545 IPR032423 AAA C-terminal domain AFA_13550 IPR029046 Lipoprotein localisation LolA/LolB/LppX AFA_13550 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AFA_13550 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria AFA_13555 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13555 IPR036390 Winged helix DNA-binding domain superfamily AFA_13555 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13555 IPR025199 DNA translocase FtsK, 4TM region AFA_13555 IPR041027 FtsK alpha domain AFA_13555 IPR002543 FtsK domain AFA_13555 IPR018541 FtsK gamma domain AFA_13560 IPR005982 Thioredoxin reductase AFA_13560 IPR023753 FAD/NAD(P)-binding domain AFA_13560 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_13560 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AFA_13570 IPR019734 Tetratricopeptide repeat AFA_13570 IPR011990 Tetratricopeptide-like helical domain superfamily AFA_13570 IPR013026 Tetratricopeptide repeat-containing domain AFA_13580 IPR020846 Major facilitator superfamily domain AFA_13580 IPR011701 Major facilitator superfamily AFA_13580 IPR036259 MFS transporter superfamily AFA_13580 IPR005829 Sugar transporter, conserved site AFA_13600 IPR029058 Alpha/Beta hydrolase fold AFA_13600 IPR002018 Carboxylesterase, type B AFA_13600 IPR019826 Carboxylesterase type B, active site AFA_13600 IPR019819 Carboxylesterase type B, conserved site AFA_13600 IPR000997 Cholinesterase AFA_13605 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_13605 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_13605 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AFA_13605 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_13605 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_13610 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic AFA_13610 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AFA_13610 IPR024084 Isopropylmalate dehydrogenase-like domain AFA_13625 IPR009056 Cytochrome c-like domain AFA_13625 IPR036909 Cytochrome c-like domain superfamily AFA_13625 IPR024167 Cytochrome c4-like AFA_13630 IPR005936 Peptidase, FtsH AFA_13630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13630 IPR003959 ATPase, AAA-type, core AFA_13630 IPR037219 Peptidase M41-like AFA_13630 IPR003593 AAA+ ATPase domain AFA_13630 IPR041569 AAA ATPase, AAA+ lid domain AFA_13630 IPR000642 Peptidase M41 AFA_13630 IPR003960 ATPase, AAA-type, conserved site AFA_13650 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_13650 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_13650 IPR003593 AAA+ ATPase domain AFA_13650 IPR001789 Signal transduction response regulator, receiver domain AFA_13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13650 IPR011006 CheY-like superfamily AFA_13650 IPR002197 DNA binding HTH domain, Fis-type AFA_13650 IPR009057 Homeobox-like domain superfamily AFA_13650 IPR025944 Sigma-54 interaction domain, conserved site AFA_13650 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_13680 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13680 IPR022399 Helicase/secretion neighbourhood ATPase AFA_13680 IPR001482 Type II/IV secretion system protein AFA_13690 IPR014004 Transport-associated and nodulation domain, bacteria AFA_13690 IPR004846 Type II/III secretion system AFA_13690 IPR032789 Pilus formation protein, N-terminal AFA_13690 IPR001775 GspD/PilQ family AFA_13690 IPR007055 BON domain AFA_13720 IPR005565 Haemolysin activator HlyB, C-terminal AFA_13720 IPR034746 POTRA domain AFA_13720 IPR013686 Polypeptide-transport-associated, ShlB-type AFA_13750 IPR001431 Peptidase M16, zinc-binding site AFA_13750 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AFA_13750 IPR011765 Peptidase M16, N-terminal AFA_13750 IPR007863 Peptidase M16, C-terminal AFA_13755 IPR002939 Chaperone DnaJ, C-terminal AFA_13755 IPR012724 Chaperone DnaJ AFA_13755 IPR036869 Chaperone J-domain superfamily AFA_13755 IPR018253 DnaJ domain, conserved site AFA_13755 IPR008971 HSP40/DnaJ peptide-binding AFA_13755 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AFA_13755 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AFA_13755 IPR001623 DnaJ domain AFA_13760 IPR013126 Heat shock protein 70 family AFA_13760 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AFA_13760 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AFA_13760 IPR018181 Heat shock protein 70, conserved site AFA_13760 IPR012725 Chaperone DnaK AFA_13765 IPR009012 GrpE nucleotide exchange factor, head AFA_13765 IPR000740 GrpE nucleotide exchange factor AFA_13765 IPR013805 GrpE nucleotide exchange factor, coiled-coil AFA_13770 IPR033644 Ferrochelatase, C-terminal AFA_13770 IPR001015 Ferrochelatase AFA_13770 IPR033659 Ferrochelatase, N-terminal AFA_13770 IPR019772 Ferrochelatase, active site AFA_13775 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13775 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal AFA_13775 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain AFA_13775 IPR002571 Heat-inducible transcription repressor HrcA AFA_13775 IPR036390 Winged helix DNA-binding domain superfamily AFA_13775 IPR029016 GAF-like domain superfamily AFA_13775 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily AFA_13780 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AFA_13780 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AFA_13780 IPR002504 NAD kinase AFA_13780 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AFA_13785 IPR003395 RecF/RecN/SMC, N-terminal AFA_13785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13785 IPR004604 DNA recombination/repair protein RecN AFA_13790 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13790 IPR002481 Ferric-uptake regulator AFA_13790 IPR036390 Winged helix DNA-binding domain superfamily AFA_13795 IPR026592 Outer membrane protein assembly factor BamE AFA_13795 IPR007450 Lipoprotein SmpA/OmlA AFA_13795 IPR037873 BamE-like AFA_13800 IPR022663 Dihydrodipicolinate reductase, C-terminal AFA_13800 IPR022664 Dihydrodipicolinate reductase, conserved site AFA_13800 IPR036291 NAD(P)-binding domain superfamily AFA_13800 IPR000846 Dihydrodipicolinate reductase, N-terminal AFA_13800 IPR023940 Dihydrodipicolinate reductase AFA_13810 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AFA_13810 IPR036318 FAD-binding, type PCMH-like superfamily AFA_13810 IPR016166 FAD-binding domain, PCMH-type AFA_13810 IPR006094 FAD linked oxidase, N-terminal AFA_13810 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily AFA_13810 IPR016167 FAD-binding, type PCMH, subdomain 1 AFA_13810 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AFA_13810 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_13830 IPR035965 PAS domain superfamily AFA_13830 IPR001633 EAL domain AFA_13830 IPR000014 PAS domain AFA_13830 IPR029787 Nucleotide cyclase AFA_13830 IPR000160 GGDEF domain AFA_13830 IPR005330 MHYT domain AFA_13830 IPR035919 EAL domain superfamily AFA_13840 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_13840 IPR011662 Secretin/TonB, short N-terminal domain AFA_13840 IPR039423 TonB-dependent receptor-like AFA_13840 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_13840 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_13840 IPR010105 TonB-dependent siderophore receptor AFA_13840 IPR010917 TonB-dependent receptor, conserved site AFA_13840 IPR012910 TonB-dependent receptor, plug domain AFA_13845 IPR036259 MFS transporter superfamily AFA_13845 IPR005829 Sugar transporter, conserved site AFA_13845 IPR011701 Major facilitator superfamily AFA_13845 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AFA_13845 IPR020846 Major facilitator superfamily domain AFA_13860 IPR000801 Putative esterase AFA_13860 IPR029058 Alpha/Beta hydrolase fold AFA_13865 IPR016161 Aldehyde/histidinol dehydrogenase AFA_13865 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_13865 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_13865 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_13865 IPR010102 Succinate semialdehyde dehydrogenase AFA_13865 IPR015590 Aldehyde dehydrogenase domain AFA_13865 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_13870 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_13870 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_13870 IPR002872 Proline dehydrogenase domain AFA_13870 IPR015590 Aldehyde dehydrogenase domain AFA_13870 IPR013321 Arc-type ribbon-helix-helix AFA_13870 IPR025703 Bifunctional protein PutA AFA_13870 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_13870 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 AFA_13870 IPR016161 Aldehyde/histidinol dehydrogenase AFA_13870 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_13870 IPR029041 FAD-linked oxidoreductase-like AFA_13870 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain AFA_13870 IPR024082 Proline dehydrogenase PutA, domain II AFA_13870 IPR024090 Proline dehydrogenase PutA, domain I AFA_13870 IPR024089 Proline dehydrogenase PutA, domain I/II AFA_13870 IPR010985 Ribbon-helix-helix AFA_13875 IPR011991 ArsR-like helix-turn-helix domain AFA_13875 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AFA_13875 IPR036390 Winged helix DNA-binding domain superfamily AFA_13875 IPR019888 Transcription regulator AsnC-type AFA_13875 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AFA_13875 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13875 IPR000485 AsnC-type HTH domain AFA_13875 IPR011008 Dimeric alpha-beta barrel AFA_13885 IPR023401 Ornithine cyclodeaminase, N-terminal AFA_13885 IPR036291 NAD(P)-binding domain superfamily AFA_13885 IPR003462 Ornithine cyclodeaminase/mu-crystallin AFA_13890 IPR020846 Major facilitator superfamily domain AFA_13890 IPR011701 Major facilitator superfamily AFA_13890 IPR005828 Major facilitator, sugar transporter-like AFA_13890 IPR005829 Sugar transporter, conserved site AFA_13890 IPR036259 MFS transporter superfamily AFA_13890 IPR004736 MFS transporter, metabolite:H symporter AFA_13895 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_13895 IPR028619 ATP-dependent RNA helicase DbpA AFA_13895 IPR011545 DEAD/DEAH box helicase domain AFA_13895 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AFA_13895 IPR001650 Helicase, C-terminal AFA_13895 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AFA_13895 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AFA_13895 IPR014014 RNA helicase, DEAD-box type, Q motif AFA_13895 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_13900 IPR009241 Toxin HigB-like AFA_13900 IPR014056 Addiction module killer protein, predicted AFA_13905 IPR001387 Cro/C1-type helix-turn-helix domain AFA_13905 IPR014057 Uncharacterized protein HI1420 AFA_13905 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AFA_13910 IPR036390 Winged helix DNA-binding domain superfamily AFA_13910 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13910 IPR000847 Transcription regulator HTH, LysR AFA_13910 IPR005119 LysR, substrate-binding AFA_13915 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit AFA_13915 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_13915 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AFA_13915 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AFA_13915 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AFA_13915 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_13920 IPR000391 Ring-hydroxylating dioxygenase beta subunit AFA_13920 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit AFA_13920 IPR032710 NTF2-like domain superfamily AFA_13925 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit AFA_13925 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_13925 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_13930 IPR036291 NAD(P)-binding domain superfamily AFA_13930 IPR023643 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase HcaB AFA_13930 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_13930 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_13935 IPR028202 Reductase, C-terminal AFA_13935 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit AFA_13935 IPR023753 FAD/NAD(P)-binding domain AFA_13935 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_13935 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AFA_13940 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase AFA_13940 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AFA_13945 IPR029058 Alpha/Beta hydrolase fold AFA_13945 IPR000073 Alpha/beta hydrolase fold-1 AFA_13945 IPR000639 Epoxide hydrolase-like AFA_13945 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase AFA_13950 IPR023793 2-keto-4-pentenoate hydratase AFA_13950 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AFA_13950 IPR011234 Fumarylacetoacetase-like, C-terminal AFA_13955 IPR036291 NAD(P)-binding domain superfamily AFA_13955 IPR015426 Acetaldehyde dehydrogenase, C-terminal AFA_13955 IPR003361 Acetaldehyde dehydrogenase AFA_13955 IPR000534 Semialdehyde dehydrogenase, NAD-binding AFA_13960 IPR013785 Aldolase-type TIM barrel AFA_13960 IPR012425 DmpG-like communication AFA_13960 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain AFA_13960 IPR017629 4-hydroxy-2-oxovalerate aldolase AFA_13960 IPR000891 Pyruvate carboxyltransferase AFA_13965 IPR011701 Major facilitator superfamily AFA_13965 IPR020846 Major facilitator superfamily domain AFA_13965 IPR036259 MFS transporter superfamily AFA_13965 IPR005829 Sugar transporter, conserved site AFA_13980 IPR023631 Amidase signature domain AFA_13980 IPR000120 Amidase AFA_13980 IPR036928 Amidase signature (AS) superfamily AFA_13980 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AFA_13980 IPR020556 Amidase, conserved site AFA_13985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_13985 IPR036390 Winged helix DNA-binding domain superfamily AFA_13985 IPR000524 Transcription regulator HTH, GntR AFA_13985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_13985 IPR015424 Pyridoxal phosphate-dependent transferase AFA_13985 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_13985 IPR004839 Aminotransferase, class I/classII AFA_13990 IPR036259 MFS transporter superfamily AFA_13990 IPR020846 Major facilitator superfamily domain AFA_13990 IPR011701 Major facilitator superfamily AFA_14005 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_14005 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_14005 IPR036291 NAD(P)-binding domain superfamily AFA_14010 IPR024501 Protein of unknown function DUF3141 AFA_14010 IPR029058 Alpha/Beta hydrolase fold AFA_14015 IPR020610 Thiolase, active site AFA_14015 IPR016039 Thiolase-like AFA_14015 IPR002155 Thiolase AFA_14015 IPR020617 Thiolase, C-terminal AFA_14015 IPR020613 Thiolase, conserved site AFA_14015 IPR020616 Thiolase, N-terminal AFA_14015 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_14020 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_14020 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_14020 IPR011283 Acetoacetyl-CoA reductase AFA_14020 IPR036291 NAD(P)-binding domain superfamily AFA_14030 IPR000412 ABC-2 transporter AFA_14035 IPR003439 ABC transporter-like AFA_14035 IPR003593 AAA+ ATPase domain AFA_14035 IPR000412 ABC-2 transporter AFA_14035 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14035 IPR017871 ABC transporter, conserved site AFA_14040 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AFA_14045 IPR003423 Outer membrane efflux protein AFA_14045 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AFA_14050 IPR000073 Alpha/beta hydrolase fold-1 AFA_14050 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I AFA_14050 IPR029058 Alpha/Beta hydrolase fold AFA_14050 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain AFA_14055 IPR001647 DNA-binding HTH domain, TetR-type AFA_14055 IPR009057 Homeobox-like domain superfamily AFA_14060 IPR003744 Queuosine precursor transporter AFA_14065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_14065 IPR018317 Queuosine biosynthesis protein QueC AFA_14070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_14070 IPR039429 Serine hydroxymethyltransferase-like domain AFA_14070 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14070 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AFA_14070 IPR001085 Serine hydroxymethyltransferase AFA_14075 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14075 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AFA_14075 IPR022278 Phosphoserine aminotransferase AFA_14075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_14075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14075 IPR000192 Aminotransferase class V domain AFA_14080 IPR036390 Winged helix DNA-binding domain superfamily AFA_14080 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14080 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14080 IPR004839 Aminotransferase, class I/classII AFA_14080 IPR000524 Transcription regulator HTH, GntR AFA_14085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_14085 IPR039429 Serine hydroxymethyltransferase-like domain AFA_14085 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AFA_14085 IPR001085 Serine hydroxymethyltransferase AFA_14085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14085 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14100 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AFA_14100 IPR029062 Class I glutamine amidotransferase-like AFA_14100 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AFA_14100 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AFA_14100 IPR017926 Glutamine amidotransferase AFA_14100 IPR006274 Carbamoyl-phosphate synthase, small subunit AFA_14105 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase AFA_14105 IPR029056 Ribokinase-like AFA_14105 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AFA_14105 IPR004625 Pyridoxine kinase AFA_14110 IPR000060 BCCT transporter family AFA_14110 IPR018093 BCCT transporter, conserved site AFA_14115 IPR015358 Transcription regulator MerR, DNA binding AFA_14115 IPR010211 Redox-sensitive transcriptional activator SoxR AFA_14115 IPR009061 Putative DNA-binding domain superfamily AFA_14115 IPR000551 MerR-type HTH domain AFA_14125 IPR001036 Acriflavin resistance protein AFA_14125 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AFA_14145 IPR028082 Periplasmic binding protein-like I AFA_14145 IPR039570 AmiC, periplasmic binding domain AFA_14145 IPR000709 Leu/Ile/Val-binding protein AFA_14150 IPR003211 AmiS/UreI transporter AFA_14150 IPR038523 AmiS/UreI transporter superfamily AFA_14175 IPR004677 Cytochrome c oxidase cbb3-type, subunit I AFA_14175 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AFA_14175 IPR023616 Cytochrome c oxidase-like, subunit I domain AFA_14175 IPR000883 Cytochrome c oxidase subunit I AFA_14175 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AFA_14180 IPR000524 Transcription regulator HTH, GntR AFA_14180 IPR004839 Aminotransferase, class I/classII AFA_14180 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_14180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14180 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14180 IPR036390 Winged helix DNA-binding domain superfamily AFA_14190 IPR005119 LysR, substrate-binding AFA_14190 IPR000847 Transcription regulator HTH, LysR AFA_14190 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14190 IPR036390 Winged helix DNA-binding domain superfamily AFA_14195 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_14195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14195 IPR005814 Aminotransferase class-III AFA_14200 IPR004391 Glutamate racemase AFA_14200 IPR033134 Asp/Glu racemase, active site 2 AFA_14200 IPR015942 Asp/Glu/hydantoin racemase AFA_14200 IPR018187 Asp/Glu racemase, active site 1 AFA_14200 IPR001920 Asp/Glu racemase AFA_14215 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_14215 IPR008475 Bacterial phospholipase C, C-terminal domain AFA_14215 IPR007312 Phosphoesterase AFA_14215 IPR017767 Bacterial phospholipase C, phosphocholine-specific AFA_14215 IPR017850 Alkaline-phosphatase-like, core domain superfamily AFA_14230 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AFA_14230 IPR006664 Outer membrane protein, bacterial AFA_14230 IPR036737 OmpA-like domain superfamily AFA_14230 IPR006665 OmpA-like domain AFA_14230 IPR006690 Outer membrane protein, OmpA-like, conserved site AFA_14230 IPR000498 Outer membrane protein OmpA-like, transmembrane domain AFA_14230 IPR002368 Outer membrane protein, OmpA AFA_14235 IPR008635 Coiled stalk of trimeric autotransporter adhesin AFA_14235 IPR008640 Head domain of trimeric autotransporter adhesin AFA_14235 IPR011049 Serralysin-like metalloprotease, C-terminal AFA_14235 IPR024973 ESPR domain AFA_14235 IPR008635 Coiled stalk of trimeric autotransporter adhesin AFA_14235 IPR008640 Head domain of trimeric autotransporter adhesin AFA_14235 IPR005594 YadA-like, C-terminal AFA_14235 IPR011049 Serralysin-like metalloprotease, C-terminal AFA_14235 IPR024973 ESPR domain AFA_14235 IPR008635 Coiled stalk of trimeric autotransporter adhesin AFA_14235 IPR008640 Head domain of trimeric autotransporter adhesin AFA_14235 IPR005594 YadA-like, C-terminal AFA_14235 IPR024973 ESPR domain AFA_14235 IPR011049 Serralysin-like metalloprotease, C-terminal AFA_14235 IPR005594 YadA-like, C-terminal AFA_14240 IPR012226 Diguanylate cyclase/phosphodiesterase AFA_14240 IPR035965 PAS domain superfamily AFA_14240 IPR000700 PAS-associated, C-terminal AFA_14240 IPR000014 PAS domain AFA_14240 IPR001610 PAC motif AFA_14240 IPR001633 EAL domain AFA_14240 IPR035919 EAL domain superfamily AFA_14240 IPR029787 Nucleotide cyclase AFA_14240 IPR000160 GGDEF domain AFA_14245 IPR009057 Homeobox-like domain superfamily AFA_14245 IPR006118 Recombinase, conserved site AFA_14245 IPR006119 Resolvase, N-terminal catalytic domain AFA_14245 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily AFA_14245 IPR006120 Resolvase, HTH domain AFA_14250 IPR042094 Type II secretion system F domain superfamily AFA_14250 IPR003004 GspF/PilC family AFA_14250 IPR011850 General secretion pathway protein F AFA_14250 IPR018076 Type II secretion system F domain AFA_14250 IPR001992 Type II secretion system conserved site AFA_14255 IPR037257 General secretory system II, protein E, N-terminal superfamily AFA_14255 IPR013369 Type II secretion system GspE AFA_14255 IPR001482 Type II/IV secretion system protein AFA_14255 IPR003593 AAA+ ATPase domain AFA_14255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14260 IPR005644 NolW-like AFA_14260 IPR038591 NolW-like superfamily AFA_14260 IPR013356 Type II secretion system GspD AFA_14260 IPR004845 Type II secretion system GspD, conserved site AFA_14260 IPR001775 GspD/PilQ family AFA_14260 IPR004846 Type II/III secretion system AFA_14285 IPR010055 Type II secretion system protein J AFA_14285 IPR012902 Prokaryotic N-terminal methylation site AFA_14295 IPR002416 Type II secretion system protein H AFA_14295 IPR022346 General secretion pathway, GspH AFA_14295 IPR012902 Prokaryotic N-terminal methylation site AFA_14300 IPR010054 General secretion pathway protein G AFA_14300 IPR000983 Bacterial general secretion pathway protein G-type pilin AFA_14300 IPR012902 Prokaryotic N-terminal methylation site AFA_14300 IPR013545 Type II secretion system protein G AFA_14310 IPR000644 CBS domain AFA_14310 IPR005990 Inosine-5'-monophosphate dehydrogenase AFA_14310 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AFA_14310 IPR001093 IMP dehydrogenase/GMP reductase AFA_14310 IPR013785 Aldolase-type TIM barrel AFA_14315 IPR005956 4-hydroxyphenylpyruvate dioxygenase AFA_14315 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal AFA_14315 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal AFA_14315 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AFA_14315 IPR037523 Vicinal oxygen chelate (VOC) domain AFA_14315 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AFA_14325 IPR004708 Aspartate ammonia-lyase AFA_14325 IPR022761 Fumarate lyase, N-terminal AFA_14325 IPR000362 Fumarate lyase family AFA_14325 IPR008948 L-Aspartase-like AFA_14325 IPR020557 Fumarate lyase, conserved site AFA_14325 IPR018951 Fumarase C, C-terminal AFA_14325 IPR024083 Fumarase/histidase, N-terminal AFA_14330 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_14330 IPR000835 MarR-type HTH domain AFA_14330 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14330 IPR036390 Winged helix DNA-binding domain superfamily AFA_14340 IPR022927 RNA pyrophosphohydrolase RppH AFA_14340 IPR015797 NUDIX hydrolase-like domain superfamily AFA_14340 IPR020084 NUDIX hydrolase, conserved site AFA_14340 IPR000086 NUDIX hydrolase domain AFA_14345 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal AFA_14345 IPR016181 Acyl-CoA N-acyltransferase AFA_14345 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase AFA_14350 IPR007471 N-end aminoacyl transferase, N-terminal AFA_14350 IPR030700 N-end rule aminoacyl transferase AFA_14350 IPR017138 Aspartate/glutamate leucyltransferase AFA_14350 IPR007472 N-end rule aminoacyl transferase, C-terminal AFA_14350 IPR016181 Acyl-CoA N-acyltransferase AFA_14355 IPR005720 Dihydroorotate dehydrogenase domain AFA_14355 IPR013785 Aldolase-type TIM barrel AFA_14355 IPR005719 Dihydroorotate dehydrogenase, class 2 AFA_14355 IPR001295 Dihydroorotate dehydrogenase, conserved site AFA_14355 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AFA_14365 IPR014757 Transcription regulator IclR, C-terminal AFA_14365 IPR036390 Winged helix DNA-binding domain superfamily AFA_14365 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14365 IPR005471 Transcription regulator IclR, N-terminal AFA_14365 IPR029016 GAF-like domain superfamily AFA_14385 IPR011545 DEAD/DEAH box helicase domain AFA_14385 IPR028622 ATP-dependent RNA helicase RhlE AFA_14385 IPR014001 Helicase superfamily 1/2, ATP-binding domain AFA_14385 IPR001650 Helicase, C-terminal AFA_14385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14385 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AFA_14385 IPR014014 RNA helicase, DEAD-box type, Q motif AFA_14405 IPR029058 Alpha/Beta hydrolase fold AFA_14405 IPR012020 AB hydrolase 4 family AFA_14405 IPR000952 AB hydrolase 4, conserved site AFA_14405 IPR000073 Alpha/beta hydrolase fold-1 AFA_14410 IPR011990 Tetratricopeptide-like helical domain superfamily AFA_14410 IPR030873 Beta-barrel assembly-enhancing protease AFA_14410 IPR001915 Peptidase M48 AFA_14430 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase AFA_14430 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AFA_14430 IPR002938 FAD-binding domain AFA_14430 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_14430 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AFA_14435 IPR001269 tRNA-dihydrouridine synthase AFA_14435 IPR013785 Aldolase-type TIM barrel AFA_14435 IPR035587 DUS-like, FMN-binding domain AFA_14435 IPR018517 tRNA-dihydrouridine synthase, conserved site AFA_14435 IPR032887 tRNA-dihydrouridine synthase B AFA_14435 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AFA_14435 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AFA_14440 IPR009057 Homeobox-like domain superfamily AFA_14440 IPR002197 DNA binding HTH domain, Fis-type AFA_14440 IPR005412 DNA-binding protein Fis AFA_14445 IPR002695 Bifunctional purine biosynthesis protein PurH-like AFA_14445 IPR011607 Methylglyoxal synthase-like domain AFA_14445 IPR016193 Cytidine deaminase-like AFA_14445 IPR024051 AICAR transformylase, duplicated domain superfamily AFA_14445 IPR036914 Methylglyoxal synthase-like domain superfamily AFA_14450 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site AFA_14450 IPR002176 Crossover junction endodeoxyribonuclease RuvC AFA_14450 IPR012337 Ribonuclease H-like superfamily AFA_14450 IPR036397 Ribonuclease H superfamily AFA_14455 IPR036267 RuvA, C-terminal domain superfamily AFA_14455 IPR012340 Nucleic acid-binding, OB-fold AFA_14455 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AFA_14455 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AFA_14455 IPR011114 Holliday junction DNA helicase RuvA, C-terminal AFA_14455 IPR000085 Bacterial DNA recombination protein RuvA AFA_14455 IPR010994 RuvA domain 2-like AFA_14460 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_14460 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AFA_14460 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_14465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14465 IPR008824 RuvB-like P-loop domain AFA_14465 IPR008823 RuvB C-terminal winged helix domain AFA_14465 IPR003593 AAA+ ATPase domain AFA_14465 IPR041445 RuvB, AAA lid domain AFA_14465 IPR004605 DNA helicase, Holliday junction RuvB-type AFA_14465 IPR036390 Winged helix DNA-binding domain superfamily AFA_14465 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14475 IPR006680 Amidohydrolase-related AFA_14475 IPR004721 Dihydroorotase homodimeric type AFA_14475 IPR002195 Dihydroorotase, conserved site AFA_14475 IPR032466 Metal-dependent hydrolase AFA_14485 IPR006050 DNA photolyase, N-terminal AFA_14485 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AFA_14485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_14485 IPR002081 Cryptochrome/DNA photolyase class 1 AFA_14485 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily AFA_14485 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily AFA_14485 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AFA_14530 IPR001307 Thiosulphate sulfurtransferase, conserved site AFA_14530 IPR001763 Rhodanese-like domain AFA_14530 IPR036873 Rhodanese-like domain superfamily AFA_14535 IPR007272 Sulphur transport domain AFA_14545 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily AFA_14545 IPR002569 Peptide methionine sulphoxide reductase MsrA AFA_14550 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt AFA_14575 IPR002823 Protein of unknown function DUF112, transmembrane AFA_14580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_14580 IPR035906 MetI-like superfamily AFA_14585 IPR003593 AAA+ ATPase domain AFA_14585 IPR003439 ABC transporter-like AFA_14585 IPR017871 ABC transporter, conserved site AFA_14585 IPR015853 ABC transporter, ferric cation import, FbpC AFA_14585 IPR008995 Molybdate/tungstate binding, C-terminal AFA_14585 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14585 IPR013611 Transport-associated OB, type 2 AFA_14590 IPR026045 Ferric binding protein AFA_14590 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_14595 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AFA_14595 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_14595 IPR036291 NAD(P)-binding domain superfamily AFA_14595 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AFA_14595 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AFA_14595 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AFA_14595 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_14600 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_14600 IPR003594 Histidine kinase/HSP90-like ATPase AFA_14600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_14600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_14600 IPR005467 Histidine kinase domain AFA_14600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_14605 IPR016032 Signal transduction response regulator, C-terminal effector AFA_14605 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14605 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_14605 IPR001789 Signal transduction response regulator, receiver domain AFA_14605 IPR039420 Transcriptional regulatory protein WalR-like AFA_14605 IPR011006 CheY-like superfamily AFA_14610 IPR015797 NUDIX hydrolase-like domain superfamily AFA_14610 IPR022927 RNA pyrophosphohydrolase RppH AFA_14610 IPR000086 NUDIX hydrolase domain AFA_14610 IPR020084 NUDIX hydrolase, conserved site AFA_14610 IPR020476 NUDIX hydrolase AFA_14615 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AFA_14615 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AFA_14615 IPR036621 Anticodon-binding domain superfamily AFA_14615 IPR002316 Proline-tRNA ligase, class IIa AFA_14615 IPR033730 Prokaryote proline-tRNA ligase core domain AFA_14615 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AFA_14615 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AFA_14615 IPR006195 Aminoacyl-tRNA synthetase, class II AFA_14615 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AFA_14615 IPR004154 Anticodon-binding AFA_14620 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family AFA_14620 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase AFA_14620 IPR006683 Thioesterase domain AFA_14620 IPR029069 HotDog domain superfamily AFA_14620 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site AFA_14625 IPR014163 Tol-Pal system, TolQ AFA_14625 IPR002898 MotA/TolQ/ExbB proton channel AFA_14630 IPR003400 Biopolymer transport protein ExbD/TolR AFA_14630 IPR014168 Tol-Pal system protein TolR AFA_14640 IPR036752 TolB, N-terminal domain superfamily AFA_14640 IPR011042 Six-bladed beta-propeller, TolB-like AFA_14640 IPR011659 WD40-like Beta Propeller AFA_14640 IPR014167 Tol-Pal system protein TolB AFA_14640 IPR007195 TolB, N-terminal AFA_14645 IPR039001 Peptidoglycan-associated lipoprotein AFA_14645 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal AFA_14645 IPR036737 OmpA-like domain superfamily AFA_14645 IPR006664 Outer membrane protein, bacterial AFA_14645 IPR006665 OmpA-like domain AFA_14645 IPR006690 Outer membrane protein, OmpA-like, conserved site AFA_14670 IPR002528 Multi antimicrobial extrusion protein AFA_14675 IPR003760 ABC transporter substrate-binding protein PnrA-like AFA_14690 IPR003593 AAA+ ATPase domain AFA_14690 IPR003439 ABC transporter-like AFA_14690 IPR017871 ABC transporter, conserved site AFA_14690 IPR015861 ABC transporter, ribose import, RbsA AFA_14690 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14700 IPR000846 Dihydrodipicolinate reductase, N-terminal AFA_14700 IPR036291 NAD(P)-binding domain superfamily AFA_14700 IPR010190 Diaminopimelate dehydrogenase, Ddh AFA_14700 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal AFA_14705 IPR004778 Homoserine/Threonine efflux protein AFA_14705 IPR001123 Amino acid exporter protein, LeuE-type AFA_14710 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily AFA_14710 IPR017821 Succinate CoA transferase AFA_14710 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AFA_14710 IPR037171 NagB/RpiA transferase-like AFA_14710 IPR003702 Acetyl-CoA hydrolase/transferase AFA_14715 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14715 IPR005119 LysR, substrate-binding AFA_14715 IPR000847 Transcription regulator HTH, LysR AFA_14715 IPR036390 Winged helix DNA-binding domain superfamily AFA_14725 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AFA_14725 IPR023753 FAD/NAD(P)-binding domain AFA_14725 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_14725 IPR002109 Glutaredoxin AFA_14725 IPR012336 Thioredoxin-like fold AFA_14725 IPR036249 Thioredoxin-like superfamily AFA_14725 IPR012081 Alkyl hydroperoxide reductase subunit F AFA_14730 IPR013766 Thioredoxin domain AFA_14730 IPR036249 Thioredoxin-like superfamily AFA_14730 IPR019479 Peroxiredoxin, C-terminal AFA_14730 IPR024706 Peroxiredoxin, AhpC-type AFA_14730 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AFA_14730 IPR017559 Alkyl hydroperoxide reductase subunit C AFA_14735 IPR004839 Aminotransferase, class I/classII AFA_14735 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14735 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_14735 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14740 IPR000620 EamA domain AFA_14745 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AFA_14745 IPR011798 Adenosine 5'-phosphosulphate reductase AFA_14745 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_14745 IPR002500 Phosphoadenosine phosphosulphate reductase AFA_14750 IPR002500 Phosphoadenosine phosphosulphate reductase AFA_14750 IPR011784 Sulphate adenylyltransferase, small subunit AFA_14750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_14755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14755 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AFA_14755 IPR000795 Transcription factor, GTP-binding domain AFA_14755 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AFA_14755 IPR005225 Small GTP-binding protein domain AFA_14755 IPR031157 Tr-type G domain, conserved site AFA_14755 IPR009000 Translation protein, beta-barrel domain superfamily AFA_14755 IPR011779 Sulphate adenylyltransferase, large subunit AFA_14760 IPR011265 GABA permease AFA_14760 IPR004841 Amino acid permease/ SLC12A domain AFA_14760 IPR004840 Amino acid permease, conserved site AFA_14765 IPR010102 Succinate semialdehyde dehydrogenase AFA_14765 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AFA_14765 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_14765 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_14765 IPR015590 Aldehyde dehydrogenase domain AFA_14765 IPR016161 Aldehyde/histidinol dehydrogenase AFA_14765 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_14770 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_14770 IPR006076 FAD dependent oxidoreductase AFA_14775 IPR009770 Domain of unknown function DUF1338 AFA_14780 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14780 IPR005119 LysR, substrate-binding AFA_14780 IPR000847 Transcription regulator HTH, LysR AFA_14780 IPR036390 Winged helix DNA-binding domain superfamily AFA_14785 IPR000890 Aliphatic acid kinase, short-chain AFA_14785 IPR023865 Aliphatic acid kinase, short-chain, conserved site AFA_14785 IPR004372 Acetate/propionate kinase AFA_14790 IPR012147 Phosphate acetyl/butyryltransferase AFA_14790 IPR002505 Phosphate acetyl/butaryl transferase AFA_14800 IPR005119 LysR, substrate-binding AFA_14800 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14800 IPR000847 Transcription regulator HTH, LysR AFA_14800 IPR036390 Winged helix DNA-binding domain superfamily AFA_14805 IPR011051 RmlC-like cupin domain superfamily AFA_14805 IPR012093 Pirin AFA_14805 IPR014710 RmlC-like jelly roll fold AFA_14805 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain AFA_14805 IPR003829 Pirin, N-terminal domain AFA_14810 IPR033424 Membrane-associated sensor domain AFA_14810 IPR029787 Nucleotide cyclase AFA_14810 IPR000160 GGDEF domain AFA_14815 IPR000120 Amidase AFA_14815 IPR020556 Amidase, conserved site AFA_14815 IPR036928 Amidase signature (AS) superfamily AFA_14815 IPR023631 Amidase signature domain AFA_14825 IPR037124 GroES chaperonin superfamily AFA_14825 IPR020818 GroES chaperonin family AFA_14825 IPR018369 Chaperonin GroES, conserved site AFA_14825 IPR011032 GroES-like superfamily AFA_14830 IPR018370 Chaperonin Cpn60, conserved site AFA_14830 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AFA_14830 IPR027413 GroEL-like equatorial domain superfamily AFA_14830 IPR027409 GroEL-like apical domain superfamily AFA_14830 IPR002423 Chaperonin Cpn60/TCP-1 family AFA_14830 IPR001844 Chaperonin Cpn60 AFA_14835 IPR033718 Diacylglycerol kinase, prokaryotic AFA_14835 IPR000829 DAGK family AFA_14835 IPR036945 Diacylglycerol kinase (DAGK) superfamily AFA_14840 IPR013785 Aldolase-type TIM barrel AFA_14840 IPR011060 Ribulose-phosphate binding barrel AFA_14840 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AFA_14840 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 AFA_14840 IPR001754 Orotidine 5'-phosphate decarboxylase domain AFA_14845 IPR003673 CoA-transferase family III AFA_14845 IPR023606 CoA-transferase family III domain superfamily AFA_14850 IPR042100 Bordetella uptake gene, domain 1 AFA_14850 IPR005064 Bordetella uptake gene AFA_14855 IPR029016 GAF-like domain superfamily AFA_14855 IPR014757 Transcription regulator IclR, C-terminal AFA_14855 IPR005471 Transcription regulator IclR, N-terminal AFA_14855 IPR036390 Winged helix DNA-binding domain superfamily AFA_14855 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_14855 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR AFA_14860 IPR036653 CinA-like, C-terminal AFA_14860 IPR008136 CinA, C-terminal AFA_14865 IPR007686 YutG/PgpA domain AFA_14865 IPR036681 PgpA-like superfamily AFA_14865 IPR026037 Phosphatidylglycerophosphatase A AFA_14870 IPR016188 PurM-like, N-terminal domain AFA_14870 IPR036921 PurM-like, N-terminal domain superfamily AFA_14870 IPR006283 Thiamine-monophosphate kinase AFA_14870 IPR010918 PurM-like, C-terminal domain AFA_14870 IPR036676 PurM-like, C-terminal domain superfamily AFA_14875 IPR035926 NusB-like superfamily AFA_14875 IPR011605 NusB antitermination factor AFA_14875 IPR006027 NusB/RsmB/TIM44 AFA_14880 IPR034964 Lumazine synthase AFA_14880 IPR036467 Lumazine/riboflavin synthase superfamily AFA_14880 IPR002180 Lumazine/riboflavin synthase AFA_14885 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AFA_14885 IPR032677 GTP cyclohydrolase II AFA_14885 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AFA_14885 IPR036144 RibA-like superfamily AFA_14900 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AFA_14900 IPR036225 SRP/SRP receptor, N-terminal AFA_14900 IPR013822 Signal recognition particle SRP54, helical bundle AFA_14900 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_14900 IPR003593 AAA+ ATPase domain AFA_14900 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AFA_14900 IPR004390 Signal-recognition particle receptor FtsY AFA_14905 IPR004398 RNA methyltransferase, RsmD AFA_14905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_14905 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AFA_14910 IPR004821 Cytidyltransferase-like domain AFA_14910 IPR001980 Phosphopantetheine adenylyltransferase AFA_14910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_14915 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_14915 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_14930 IPR015424 Pyridoxal phosphate-dependent transferase AFA_14930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_14930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_14930 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase AFA_14930 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AFA_14940 IPR023401 Ornithine cyclodeaminase, N-terminal AFA_14940 IPR036291 NAD(P)-binding domain superfamily AFA_14940 IPR003462 Ornithine cyclodeaminase/mu-crystallin AFA_14945 IPR023787 Type III secretion system flagellar brake protein YcgR AFA_14945 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AFA_14945 IPR009875 PilZ domain AFA_14945 IPR012349 FMN-binding split barrel AFA_14960 IPR000868 Isochorismatase-like AFA_14960 IPR036380 Isochorismatase-like superfamily AFA_14970 IPR029058 Alpha/Beta hydrolase fold AFA_14970 IPR000073 Alpha/beta hydrolase fold-1 AFA_14975 IPR009056 Cytochrome c-like domain AFA_14975 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AFA_14975 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AFA_14975 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AFA_14975 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AFA_14975 IPR036909 Cytochrome c-like domain superfamily AFA_14980 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_14980 IPR012675 Beta-grasp domain superfamily AFA_14980 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_14980 IPR036884 [2Fe-2S]-binding domain superfamily AFA_14980 IPR002888 [2Fe-2S]-binding AFA_14980 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_14985 IPR036909 Cytochrome c-like domain superfamily AFA_14985 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AFA_14985 IPR009056 Cytochrome c-like domain AFA_14985 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AFA_14985 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AFA_14985 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AFA_14995 IPR017871 ABC transporter, conserved site AFA_14995 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_14995 IPR003593 AAA+ ATPase domain AFA_14995 IPR003439 ABC transporter-like AFA_14995 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15000 IPR003439 ABC transporter-like AFA_15000 IPR017871 ABC transporter, conserved site AFA_15000 IPR003593 AAA+ ATPase domain AFA_15000 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_15000 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15005 IPR001851 ABC transporter, permease AFA_15005 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AFA_15010 IPR000709 Leu/Ile/Val-binding protein AFA_15010 IPR028082 Periplasmic binding protein-like I AFA_15010 IPR028081 Leucine-binding protein domain AFA_15015 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase AFA_15015 IPR033813 Penicillin G acylase, C-terminal AFA_15015 IPR023343 Penicillin amidase type, domain 1 AFA_15015 IPR014395 Penicillin/GL-7-ACA/AHL acylase AFA_15015 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_15020 IPR029787 Nucleotide cyclase AFA_15020 IPR000160 GGDEF domain AFA_15020 IPR033424 Membrane-associated sensor domain AFA_15025 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain AFA_15025 IPR005119 LysR, substrate-binding AFA_15025 IPR036390 Winged helix DNA-binding domain superfamily AFA_15025 IPR000847 Transcription regulator HTH, LysR AFA_15025 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15030 IPR000917 Sulfatase, N-terminal AFA_15030 IPR024607 Sulfatase, conserved site AFA_15030 IPR017850 Alkaline-phosphatase-like, core domain superfamily AFA_15030 IPR032506 Domain of unknown function DUF4976 AFA_15035 IPR005064 Bordetella uptake gene AFA_15035 IPR042100 Bordetella uptake gene, domain 1 AFA_15045 IPR001279 Metallo-beta-lactamase AFA_15045 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AFA_15045 IPR013471 Ribonuclease Z/BN AFA_15060 IPR025202 Phospholipase D-like domain AFA_15060 IPR001736 Phospholipase D/Transphosphatidylase AFA_15060 IPR030871 Cardiolipin synthase C AFA_15070 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr AFA_15070 IPR036652 YjeF N-terminal domain superfamily AFA_15070 IPR004443 YjeF N-terminal domain AFA_15070 IPR029056 Ribokinase-like AFA_15070 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AFA_15070 IPR017953 Carbohydrate kinase, predicted, conserved site AFA_15075 IPR003777 XdhC- CoxI AFA_15075 IPR027051 XdhC Rossmann domain AFA_15075 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family AFA_15080 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_15080 IPR004681 TRAP transporter large membrane protein DctM AFA_15090 IPR012675 Beta-grasp domain superfamily AFA_15090 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_15090 IPR002888 [2Fe-2S]-binding AFA_15090 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_15090 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_15090 IPR036884 [2Fe-2S]-binding domain superfamily AFA_15095 IPR005107 CO dehydrogenase flavoprotein, C-terminal AFA_15095 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AFA_15095 IPR016166 FAD-binding domain, PCMH-type AFA_15095 IPR036318 FAD-binding, type PCMH-like superfamily AFA_15095 IPR016167 FAD-binding, type PCMH, subdomain 1 AFA_15095 IPR016169 FAD-binding, type PCMH, subdomain 2 AFA_15095 IPR002346 Molybdopterin dehydrogenase, FAD-binding AFA_15100 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AFA_15100 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AFA_15100 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AFA_15100 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AFA_15105 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_15105 IPR041722 Alpha-keto acid binding periplasmic protein AFA_15105 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_15105 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_15105 IPR026289 Solute binding protein, TakP-like AFA_15110 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_15110 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_15115 IPR028202 Reductase, C-terminal AFA_15115 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AFA_15115 IPR023753 FAD/NAD(P)-binding domain AFA_15115 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_15120 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AFA_15120 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AFA_15120 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AFA_15120 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_15120 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_15130 IPR036380 Isochorismatase-like superfamily AFA_15130 IPR000868 Isochorismatase-like AFA_15140 IPR029058 Alpha/Beta hydrolase fold AFA_15140 IPR000073 Alpha/beta hydrolase fold-1 AFA_15150 IPR023187 Transcriptional regulator MarR-type, conserved site AFA_15150 IPR000835 MarR-type HTH domain AFA_15150 IPR036390 Winged helix DNA-binding domain superfamily AFA_15150 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15155 IPR003439 ABC transporter-like AFA_15155 IPR017871 ABC transporter, conserved site AFA_15155 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15155 IPR003593 AAA+ ATPase domain AFA_15170 IPR010916 TonB box, conserved site AFA_15170 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_15170 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_15170 IPR012910 TonB-dependent receptor, plug domain AFA_15170 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_15170 IPR039426 Vitamin B12 transporter BtuB-like AFA_15170 IPR010101 TonB-dependent vitamin B12 transporter BtuB AFA_15175 IPR006161 Conserved hypothetical protein CHP00336 AFA_15175 IPR006160 Short chain fatty acid transporter AtoE AFA_15190 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AFA_15190 IPR006309 DNA polymerase 3, epsilon subunit AFA_15190 IPR036397 Ribonuclease H superfamily AFA_15190 IPR013520 Exonuclease, RNase T/DNA polymerase III AFA_15190 IPR012337 Ribonuclease H-like superfamily AFA_15195 IPR001036 Acriflavin resistance protein AFA_15195 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AFA_15200 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AFA_15200 IPR006143 RND efflux pump, membrane fusion protein AFA_15205 IPR012337 Ribonuclease H-like superfamily AFA_15205 IPR002156 Ribonuclease H domain AFA_15205 IPR036397 Ribonuclease H superfamily AFA_15205 IPR022892 Ribonuclease HI AFA_15210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_15210 IPR026669 Arsenite methyltransferase-like AFA_15210 IPR013216 Methyltransferase type 11 AFA_15215 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AFA_15215 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AFA_15215 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AFA_15215 IPR017782 Hydroxyacylglutathione hydrolase AFA_15215 IPR001279 Metallo-beta-lactamase AFA_15220 IPR036779 LysM domain superfamily AFA_15220 IPR018392 LysM domain AFA_15220 IPR023346 Lysozyme-like domain superfamily AFA_15220 IPR008258 Transglycosylase SLT domain 1 AFA_15220 IPR000189 Prokaryotic transglycosylase, active site AFA_15225 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) AFA_15225 IPR036291 NAD(P)-binding domain superfamily AFA_15225 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_15230 IPR003593 AAA+ ATPase domain AFA_15230 IPR011006 CheY-like superfamily AFA_15230 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_15230 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_15230 IPR001789 Signal transduction response regulator, receiver domain AFA_15230 IPR009057 Homeobox-like domain superfamily AFA_15230 IPR002197 DNA binding HTH domain, Fis-type AFA_15230 IPR025944 Sigma-54 interaction domain, conserved site AFA_15230 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15230 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_15235 IPR003594 Histidine kinase/HSP90-like ATPase AFA_15235 IPR033479 Double Cache domain 1 AFA_15235 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AFA_15235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_15235 IPR029151 Periplasmic sensor-like domain superfamily AFA_15235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_15235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_15235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_15235 IPR005467 Histidine kinase domain AFA_15240 IPR036458 Sodium:dicarboxylate symporter superfamily AFA_15240 IPR018107 Sodium:dicarboxylate symporter, conserved site AFA_15240 IPR001991 Sodium:dicarboxylate symporter AFA_15240 IPR023954 C4-dicarboxylate transport protein AFA_15270 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AFA_15270 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AFA_15275 IPR014710 RmlC-like jelly roll fold AFA_15275 IPR011051 RmlC-like cupin domain superfamily AFA_15275 IPR010300 Cysteine dioxygenase type I AFA_15280 IPR029045 ClpP/crotonase-like domain superfamily AFA_15280 IPR001753 Enoyl-CoA hydratase/isomerase AFA_15280 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_15280 IPR014748 Enoyl-CoA hydratase, C-terminal AFA_15285 IPR013815 ATP-grasp fold, subdomain 1 AFA_15285 IPR011761 ATP-grasp fold AFA_15285 IPR016181 Acyl-CoA N-acyltransferase AFA_15285 IPR003781 CoA-binding AFA_15285 IPR000182 GNAT domain AFA_15285 IPR036291 NAD(P)-binding domain superfamily AFA_15285 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AFA_15285 IPR016102 Succinyl-CoA synthetase-like AFA_15290 IPR005064 Bordetella uptake gene AFA_15290 IPR042100 Bordetella uptake gene, domain 1 AFA_15295 IPR020843 Polyketide synthase, enoylreductase domain AFA_15295 IPR014188 Acrylyl-CoA reductase AcuI AFA_15295 IPR013149 Alcohol dehydrogenase, C-terminal AFA_15295 IPR013154 Alcohol dehydrogenase, N-terminal AFA_15295 IPR011032 GroES-like superfamily AFA_15295 IPR036291 NAD(P)-binding domain superfamily AFA_15300 IPR023606 CoA-transferase family III domain superfamily AFA_15300 IPR003673 CoA-transferase family III AFA_15305 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_15305 IPR029045 ClpP/crotonase-like domain superfamily AFA_15305 IPR001753 Enoyl-CoA hydratase/isomerase AFA_15305 IPR014748 Enoyl-CoA hydratase, C-terminal AFA_15320 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AFA_15320 IPR036291 NAD(P)-binding domain superfamily AFA_15320 IPR011032 GroES-like superfamily AFA_15320 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 AFA_15320 IPR013154 Alcohol dehydrogenase, N-terminal AFA_15320 IPR013149 Alcohol dehydrogenase, C-terminal AFA_15320 IPR020843 Polyketide synthase, enoylreductase domain AFA_15325 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AFA_15325 IPR013785 Aldolase-type TIM barrel AFA_15330 IPR000847 Transcription regulator HTH, LysR AFA_15330 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15330 IPR036390 Winged helix DNA-binding domain superfamily AFA_15330 IPR005119 LysR, substrate-binding AFA_15345 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_15345 IPR017850 Alkaline-phosphatase-like, core domain superfamily AFA_15345 IPR017767 Bacterial phospholipase C, phosphocholine-specific AFA_15345 IPR007312 Phosphoesterase AFA_15345 IPR008475 Bacterial phospholipase C, C-terminal domain AFA_15350 IPR005119 LysR, substrate-binding AFA_15350 IPR000847 Transcription regulator HTH, LysR AFA_15350 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15350 IPR036390 Winged helix DNA-binding domain superfamily AFA_15355 IPR006323 Phosphonoacetaldehyde hydrolase AFA_15355 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AFA_15355 IPR023214 HAD superfamily AFA_15355 IPR041492 Haloacid dehalogenase-like hydrolase AFA_15355 IPR006439 HAD hydrolase, subfamily IA AFA_15355 IPR036412 HAD-like superfamily AFA_15360 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AFA_15360 IPR039697 Iron-type alcohol dehydrogenase-like AFA_15360 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AFA_15365 IPR005769 ABC transporter, permease PhnE/PtxC AFA_15365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_15365 IPR035906 MetI-like superfamily AFA_15370 IPR017871 ABC transporter, conserved site AFA_15370 IPR003439 ABC transporter-like AFA_15370 IPR003593 AAA+ ATPase domain AFA_15370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15370 IPR012693 ABC transporter, phosphonate import, PhnC AFA_15375 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein AFA_15380 IPR005119 LysR, substrate-binding AFA_15380 IPR000847 Transcription regulator HTH, LysR AFA_15380 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15380 IPR036390 Winged helix DNA-binding domain superfamily AFA_15385 IPR025110 AMP-binding enzyme, C-terminal domain AFA_15385 IPR042099 AMP-dependent synthetase-like superfamily AFA_15385 IPR000873 AMP-dependent synthetase/ligase AFA_15385 IPR020845 AMP-binding, conserved site AFA_15405 IPR036390 Winged helix DNA-binding domain superfamily AFA_15405 IPR005119 LysR, substrate-binding AFA_15405 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 AFA_15405 IPR000847 Transcription regulator HTH, LysR AFA_15405 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15415 IPR000802 Arsenical pump membrane protein, ArsB AFA_15420 IPR036249 Thioredoxin-like superfamily AFA_15420 IPR006660 Arsenate reductase-like AFA_15420 IPR006659 Arsenate reductase AFA_15425 IPR005025 NADPH-dependent FMN reductase-like AFA_15425 IPR029039 Flavoprotein-like superfamily AFA_15425 IPR014063 Arsenate resistance ArsH AFA_15430 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15430 IPR039420 Transcriptional regulatory protein WalR-like AFA_15430 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_15430 IPR011006 CheY-like superfamily AFA_15430 IPR001789 Signal transduction response regulator, receiver domain AFA_15435 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_15435 IPR013727 Two-component sensor kinase, N-terminal AFA_15435 IPR003660 HAMP domain AFA_15435 IPR003594 Histidine kinase/HSP90-like ATPase AFA_15435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_15435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_15435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_15435 IPR005467 Histidine kinase domain AFA_15450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_15450 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AFA_15450 IPR015424 Pyridoxal phosphate-dependent transferase AFA_15450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_15450 IPR006234 O-succinylhomoserine sulfhydrylase AFA_15455 IPR011701 Major facilitator superfamily AFA_15455 IPR020846 Major facilitator superfamily domain AFA_15455 IPR036259 MFS transporter superfamily AFA_15465 IPR000182 GNAT domain AFA_15465 IPR016181 Acyl-CoA N-acyltransferase AFA_15470 IPR020449 Transcription regulator HTH, AraC- type AFA_15470 IPR018062 HTH domain AraC-type, conserved site AFA_15470 IPR018060 DNA binding HTH domain, AraC-type AFA_15470 IPR009057 Homeobox-like domain superfamily AFA_15470 IPR029062 Class I glutamine amidotransferase-like AFA_15480 IPR002125 Cytidine and deoxycytidylate deaminase domain AFA_15480 IPR016192 APOBEC/CMP deaminase, zinc-binding AFA_15480 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AFA_15480 IPR016193 Cytidine deaminase-like AFA_15480 IPR024072 Dihydrofolate reductase-like domain superfamily AFA_15480 IPR004794 Riboflavin biosynthesis protein RibD AFA_15480 IPR011549 Riboflavin-specific deaminase, C-terminal AFA_15485 IPR005144 ATP-cone domain AFA_15485 IPR003796 Ribonucleotide reductase regulator NrdR-like AFA_15490 IPR015424 Pyridoxal phosphate-dependent transferase AFA_15490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_15490 IPR001085 Serine hydroxymethyltransferase AFA_15490 IPR039429 Serine hydroxymethyltransferase-like domain AFA_15490 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AFA_15490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_15495 IPR008914 Phosphatidylethanolamine-binding protein AFA_15495 IPR036610 PEBP-like superfamily AFA_15495 IPR005247 YbhB/YbcL AFA_15500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_15500 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 AFA_15500 IPR024088 Tyrosine-tRNA ligase, bacterial-type AFA_15500 IPR002307 Tyrosine-tRNA ligase AFA_15500 IPR036986 RNA-binding S4 domain superfamily AFA_15500 IPR002942 RNA-binding S4 domain AFA_15500 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_15500 IPR002305 Aminoacyl-tRNA synthetase, class Ic AFA_15505 IPR016047 Peptidase M23 AFA_15505 IPR007340 Opacity-associated protein A AFA_15505 IPR011055 Duplicated hybrid motif AFA_15510 IPR005338 Anhydro-N-acetylmuramic acid kinase AFA_15525 IPR035903 HesB-like domain superfamily AFA_15525 IPR016092 FeS cluster insertion protein AFA_15525 IPR017870 FeS cluster insertion, C-terminal, conserved site AFA_15525 IPR000361 FeS cluster biogenesis AFA_15525 IPR023063 FeS cluster insertion protein ErpA AFA_15535 IPR000534 Semialdehyde dehydrogenase, NAD-binding AFA_15535 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AFA_15535 IPR036291 NAD(P)-binding domain superfamily AFA_15535 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AFA_15535 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AFA_15540 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_15540 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_15540 IPR000754 Ribosomal protein S9 AFA_15540 IPR023035 Ribosomal protein S9, bacterial/plastid AFA_15540 IPR020574 Ribosomal protein S9, conserved site AFA_15545 IPR005822 Ribosomal protein L13 AFA_15545 IPR005823 Ribosomal protein L13, bacterial-type AFA_15545 IPR036899 Ribosomal protein L13 superfamily AFA_15550 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_15550 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_15550 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_15550 IPR026289 Solute binding protein, TakP-like AFA_15550 IPR041722 Alpha-keto acid binding periplasmic protein AFA_15555 IPR036059 Metalloprotease TldD/PmbA superfamily AFA_15555 IPR002510 Metalloprotease TldD/PmbA AFA_15555 IPR035068 Metalloprotease TldD/PmbA, N-terminal AFA_15560 IPR006839 Ribosome-associated, YjgA AFA_15560 IPR023153 PSPTO4464-like domain superfamily AFA_15575 IPR016102 Succinyl-CoA synthetase-like AFA_15575 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AFA_15575 IPR036291 NAD(P)-binding domain superfamily AFA_15575 IPR000182 GNAT domain AFA_15575 IPR003781 CoA-binding AFA_15575 IPR013815 ATP-grasp fold, subdomain 1 AFA_15575 IPR011761 ATP-grasp fold AFA_15575 IPR016181 Acyl-CoA N-acyltransferase AFA_15580 IPR023298 P-type ATPase, transmembrane domain superfamily AFA_15580 IPR004014 Cation-transporting P-type ATPase, N-terminal AFA_15580 IPR023299 P-type ATPase, cytoplasmic domain N AFA_15580 IPR018303 P-type ATPase, phosphorylation site AFA_15580 IPR008250 P-type ATPase, A domain superfamily AFA_15580 IPR001757 P-type ATPase AFA_15580 IPR023214 HAD superfamily AFA_15580 IPR006415 P-type ATPase, subfamily IIIB AFA_15580 IPR006068 Cation-transporting P-type ATPase, C-terminal AFA_15580 IPR036412 HAD-like superfamily AFA_15585 IPR005467 Histidine kinase domain AFA_15585 IPR011006 CheY-like superfamily AFA_15585 IPR003594 Histidine kinase/HSP90-like ATPase AFA_15585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_15585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_15585 IPR001610 PAC motif AFA_15585 IPR000014 PAS domain AFA_15585 IPR000700 PAS-associated, C-terminal AFA_15585 IPR035965 PAS domain superfamily AFA_15585 IPR013656 PAS fold-4 AFA_15585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_15585 IPR001789 Signal transduction response regulator, receiver domain AFA_15585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_15590 IPR011006 CheY-like superfamily AFA_15590 IPR001789 Signal transduction response regulator, receiver domain AFA_15590 IPR000792 Transcription regulator LuxR, C-terminal AFA_15590 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15595 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 AFA_15595 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AFA_15595 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AFA_15595 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AFA_15595 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AFA_15595 IPR033910 Glutamyl-tRNA synthetase AFA_15595 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AFA_15595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_15600 IPR038590 YaeQ superfamily AFA_15600 IPR009822 YaeQ AFA_15600 IPR011335 Restriction endonuclease type II-like AFA_15610 IPR011991 ArsR-like helix-turn-helix domain AFA_15610 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AFA_15610 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15610 IPR036390 Winged helix DNA-binding domain superfamily AFA_15610 IPR011008 Dimeric alpha-beta barrel AFA_15610 IPR019888 Transcription regulator AsnC-type AFA_15610 IPR000485 AsnC-type HTH domain AFA_15625 IPR003425 CCB3/YggT AFA_15630 IPR018060 DNA binding HTH domain, AraC-type AFA_15630 IPR009057 Homeobox-like domain superfamily AFA_15630 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AFA_15630 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AFA_15630 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AFA_15630 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AFA_15630 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15630 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AFA_15630 IPR016221 Bifunctional regulatory protein Ada AFA_15630 IPR004026 Ada DNA repair, metal-binding AFA_15630 IPR035451 Ada-like domain superfamily AFA_15630 IPR018062 HTH domain AraC-type, conserved site AFA_15635 IPR008816 Glycine zipper 2TM domain AFA_15640 IPR029056 Ribokinase-like AFA_15640 IPR011611 Carbohydrate kinase PfkB AFA_15640 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AFA_15650 IPR004498 Ribosomal protein L11 methyltransferase AFA_15650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_15655 IPR013815 ATP-grasp fold, subdomain 1 AFA_15655 IPR005481 Biotin carboxylase-like, N-terminal domain AFA_15655 IPR011764 Biotin carboxylation domain AFA_15655 IPR005482 Biotin carboxylase, C-terminal AFA_15655 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AFA_15655 IPR016185 Pre-ATP-grasp domain superfamily AFA_15655 IPR011761 ATP-grasp fold AFA_15655 IPR011054 Rudiment single hybrid motif AFA_15655 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AFA_15660 IPR001882 Biotin-binding site AFA_15660 IPR000089 Biotin/lipoyl attachment AFA_15660 IPR011053 Single hybrid motif AFA_15660 IPR001249 Acetyl-CoA biotin carboxyl carrier AFA_15665 IPR036441 Dehydroquinase, class II superfamily AFA_15665 IPR018509 Dehydroquinase, class II, conserved site AFA_15665 IPR001874 Dehydroquinase, class II AFA_15670 IPR013766 Thioredoxin domain AFA_15670 IPR036249 Thioredoxin-like superfamily AFA_15670 IPR023555 Thiol-disulphide oxidoreductase ResA AFA_15670 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AFA_15675 IPR013221 Mur ligase, central AFA_15675 IPR036615 Mur ligase, C-terminal domain superfamily AFA_15675 IPR004101 Mur ligase, C-terminal AFA_15675 IPR036565 Mur-like, catalytic domain superfamily AFA_15675 IPR005757 Murein peptide ligase AFA_15675 IPR000713 Mur ligase, N-terminal catalytic domain AFA_15680 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AFA_15680 IPR029058 Alpha/Beta hydrolase fold AFA_15695 IPR022893 Shikimate dehydrogenase family AFA_15695 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AFA_15695 IPR036291 NAD(P)-binding domain superfamily AFA_15695 IPR041121 SDH, C-terminal AFA_15695 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AFA_15695 IPR011342 Shikimate dehydrogenase AFA_15700 IPR011812 Biosynthetic peptidoglycan transglycosylase AFA_15700 IPR001264 Glycosyl transferase, family 51 AFA_15700 IPR023346 Lysozyme-like domain superfamily AFA_15700 IPR036950 Penicillin binding protein transglycosylase domain AFA_15710 IPR029052 Metallo-dependent phosphatase-like AFA_15710 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AFA_15710 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AFA_15715 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AFA_15715 IPR002123 Phospholipid/glycerol acyltransferase AFA_15720 IPR037027 YqgF/RNase H-like domain superfamily AFA_15720 IPR006641 YqgF/RNase H-like domain AFA_15720 IPR005227 Putative pre-16S rRNA nuclease AFA_15720 IPR012337 Ribonuclease H-like superfamily AFA_15725 IPR003774 Protein of unknown function UPF0301 AFA_15730 IPR024922 Rubredoxin AFA_15730 IPR024934 Rubredoxin-like domain AFA_15730 IPR024935 Rubredoxin domain AFA_15730 IPR018527 Rubredoxin, iron-binding site AFA_15740 IPR013785 Aldolase-type TIM barrel AFA_15740 IPR036206 Thiamin phosphate synthase superfamily AFA_15740 IPR022998 Thiamine phosphate synthase/TenI AFA_15740 IPR034291 Thiamine phosphate synthase AFA_15745 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AFA_15745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_15745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_15745 IPR015424 Pyridoxal phosphate-dependent transferase AFA_15745 IPR005814 Aminotransferase class-III AFA_15750 IPR025110 AMP-binding enzyme, C-terminal domain AFA_15750 IPR000873 AMP-dependent synthetase/ligase AFA_15750 IPR011957 Benzoate-CoA ligase family AFA_15760 IPR002813 Arginine biosynthesis protein ArgJ AFA_15760 IPR016117 ArgJ-like domain superfamily AFA_15760 IPR042195 ArgJ beta chain, C-terminal domain AFA_15770 IPR036629 YjbJ superfamily AFA_15770 IPR026042 Stress response protein YjbJ AFA_15770 IPR008462 CsbD-like domain AFA_15775 IPR036164 L21-like superfamily AFA_15775 IPR028909 Ribosomal protein L21-like AFA_15775 IPR018258 Ribosomal protein L21, conserved site AFA_15775 IPR001787 Ribosomal protein L21 AFA_15780 IPR018261 Ribosomal protein L27, conserved site AFA_15780 IPR001684 Ribosomal protein L27 AFA_15785 IPR006073 GTP binding domain AFA_15785 IPR006169 GTP1/OBG domain AFA_15785 IPR006074 GTP1/OBG, conserved site AFA_15785 IPR014100 GTP-binding protein Obg/CgtA AFA_15785 IPR035101 GTP-binding protein, Obg-type AFA_15785 IPR031167 OBG-type guanine nucleotide-binding (G) domain AFA_15785 IPR036726 GTP1/OBG domain superfamily AFA_15785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15790 IPR011529 Glutamate 5-kinase AFA_15790 IPR001057 Glutamate/acetylglutamate kinase AFA_15790 IPR041739 Glutamate-5-kinase domain AFA_15790 IPR001048 Aspartate/glutamate/uridylate kinase AFA_15790 IPR036393 Acetylglutamate kinase-like superfamily AFA_15790 IPR036974 PUA domain superfamily AFA_15790 IPR015947 PUA-like superfamily AFA_15790 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AFA_15790 IPR002478 PUA domain AFA_15790 IPR019797 Glutamate 5-kinase, conserved site AFA_15795 IPR023080 D-amino acid dehydrogenase DadA AFA_15795 IPR006076 FAD dependent oxidoreductase AFA_15795 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_15815 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B AFA_15815 IPR038521 ThiC/Bza superfamily AFA_15815 IPR037509 Phosphomethylpyrimidine synthase AFA_15815 IPR025747 ThiC-associated domain AFA_15820 IPR028974 TSP type-3 repeat AFA_15820 IPR006664 Outer membrane protein, bacterial AFA_15820 IPR006665 OmpA-like domain AFA_15820 IPR006690 Outer membrane protein, OmpA-like, conserved site AFA_15820 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AFA_15820 IPR008722 Outer membrane porin F, N-terminal AFA_15820 IPR036737 OmpA-like domain superfamily AFA_15825 IPR042100 Bordetella uptake gene, domain 1 AFA_15825 IPR005064 Bordetella uptake gene AFA_15830 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AFA_15830 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15830 IPR003439 ABC transporter-like AFA_15830 IPR003593 AAA+ ATPase domain AFA_15830 IPR017871 ABC transporter, conserved site AFA_15835 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_15835 IPR035906 MetI-like superfamily AFA_15835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_15840 IPR035906 MetI-like superfamily AFA_15840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_15840 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AFA_15845 IPR018313 Solute-binding protein family 3, conserved site AFA_15845 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AFA_15850 IPR003593 AAA+ ATPase domain AFA_15850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15850 IPR017871 ABC transporter, conserved site AFA_15850 IPR005286 Cell division protein FtsE, ATP-binding AFA_15850 IPR003439 ABC transporter-like AFA_15855 IPR004513 Cell division protein FtsX AFA_15855 IPR040690 FtsX, extracellular domain AFA_15860 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AFA_15860 IPR029119 MutY, C-terminal AFA_15860 IPR015797 NUDIX hydrolase-like domain superfamily AFA_15860 IPR000445 Helix-hairpin-helix motif AFA_15860 IPR003265 HhH-GPD domain AFA_15860 IPR004035 Endonuclease III, iron-sulphur binding site AFA_15860 IPR004036 Endonuclease III-like, conserved site-2 AFA_15860 IPR011257 DNA glycosylase AFA_15860 IPR005760 A/G-specific adenine glycosylase MutY AFA_15860 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AFA_15865 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AFA_15865 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AFA_15865 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB AFA_15870 IPR005311 Penicillin-binding protein, dimerisation domain AFA_15870 IPR017790 Penicillin-binding protein 2 AFA_15870 IPR001460 Penicillin-binding protein, transpeptidase AFA_15870 IPR012338 Beta-lactamase/transpeptidase-like AFA_15870 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AFA_15880 IPR007221 Rod shape-determining protein MreC AFA_15880 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 AFA_15880 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 AFA_15885 IPR004753 Cell shape determining protein MreB AFA_15890 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C AFA_15890 IPR003837 Glu-tRNAGln amidotransferase C subunit AFA_15895 IPR020556 Amidase, conserved site AFA_15895 IPR023631 Amidase signature domain AFA_15895 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AFA_15895 IPR036928 Amidase signature (AS) superfamily AFA_15895 IPR000120 Amidase AFA_15900 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AFA_15900 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site AFA_15900 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AFA_15900 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 AFA_15900 IPR018027 Asn/Gln amidotransferase AFA_15900 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic AFA_15900 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E AFA_15900 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit AFA_15900 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AFA_15905 IPR023031 Orotate phosphoribosyltransferase AFA_15905 IPR000836 Phosphoribosyltransferase domain AFA_15905 IPR029057 Phosphoribosyltransferase-like AFA_15905 IPR004467 Orotate phosphoribosyl transferase domain AFA_15910 IPR005119 LysR, substrate-binding AFA_15910 IPR000847 Transcription regulator HTH, LysR AFA_15910 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15910 IPR036390 Winged helix DNA-binding domain superfamily AFA_15915 IPR032808 DoxX family AFA_15920 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type AFA_15920 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AFA_15930 IPR002323 Cytochrome c, class IE AFA_15930 IPR036909 Cytochrome c-like domain superfamily AFA_15930 IPR009056 Cytochrome c-like domain AFA_15935 IPR001287 Nitrite reductase, copper-type AFA_15935 IPR008972 Cupredoxin AFA_15935 IPR011707 Multicopper oxidase, type 3 AFA_15935 IPR001117 Multicopper oxidase, type 1 AFA_15940 IPR036390 Winged helix DNA-binding domain superfamily AFA_15940 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_15940 IPR000835 MarR-type HTH domain AFA_15945 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_15945 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_15945 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_15945 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_15945 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_15945 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_15945 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AFA_15950 IPR020846 Major facilitator superfamily domain AFA_15950 IPR036259 MFS transporter superfamily AFA_15950 IPR004734 Multidrug resistance protein AFA_15950 IPR005829 Sugar transporter, conserved site AFA_15950 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AFA_15950 IPR011701 Major facilitator superfamily AFA_15955 IPR016102 Succinyl-CoA synthetase-like AFA_15955 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AFA_15955 IPR036291 NAD(P)-binding domain superfamily AFA_15955 IPR000182 GNAT domain AFA_15955 IPR003781 CoA-binding AFA_15955 IPR013815 ATP-grasp fold, subdomain 1 AFA_15955 IPR011761 ATP-grasp fold AFA_15955 IPR016181 Acyl-CoA N-acyltransferase AFA_15960 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_15960 IPR029045 ClpP/crotonase-like domain superfamily AFA_15960 IPR001753 Enoyl-CoA hydratase/isomerase AFA_15965 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AFA_15965 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AFA_15965 IPR023616 Cytochrome c oxidase-like, subunit I domain AFA_15965 IPR000883 Cytochrome c oxidase subunit I AFA_15975 IPR025944 Sigma-54 interaction domain, conserved site AFA_15975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_15975 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_15975 IPR002197 DNA binding HTH domain, Fis-type AFA_15975 IPR009057 Homeobox-like domain superfamily AFA_15975 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_15975 IPR029016 GAF-like domain superfamily AFA_15975 IPR003018 GAF domain AFA_15975 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_15975 IPR003593 AAA+ ATPase domain AFA_15995 IPR009057 Homeobox-like domain superfamily AFA_15995 IPR001647 DNA-binding HTH domain, TetR-type AFA_15995 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AFA_16000 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_16000 IPR014105 Carotenoid/retinoid oxidoreductase AFA_16000 IPR002937 Amine oxidase AFA_16010 IPR003333 Mycolic acid cyclopropane synthase AFA_16010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_16030 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_16030 IPR036291 NAD(P)-binding domain superfamily AFA_16030 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_16035 IPR010099 Epimerase family protein SDR39U1 AFA_16035 IPR001509 NAD-dependent epimerase/dehydratase AFA_16035 IPR036291 NAD(P)-binding domain superfamily AFA_16035 IPR013549 Domain of unknown function DUF1731 AFA_16040 IPR004445 Sodium/glutamate symport carrier protein GltS AFA_16045 IPR008949 Isoprenoid synthase domain superfamily AFA_16045 IPR000092 Polyprenyl synthetase AFA_16045 IPR033749 Polyprenyl synthetase, conserved site AFA_16055 IPR000086 NUDIX hydrolase domain AFA_16055 IPR020084 NUDIX hydrolase, conserved site AFA_16055 IPR015797 NUDIX hydrolase-like domain superfamily AFA_16055 IPR020476 NUDIX hydrolase AFA_16060 IPR037163 Spermidine synthase, tetramerisation domain superfamily AFA_16060 IPR035246 Spermidine synthase, tetramerisation domain AFA_16060 IPR001045 Spermidine/spermine synthases AFA_16060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_16060 IPR030374 Polyamine biosynthesis domain AFA_16065 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AFA_16065 IPR003423 Outer membrane efflux protein AFA_16070 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AFA_16070 IPR001036 Acriflavin resistance protein AFA_16070 IPR023931 Multidrug resistance protein MdtC AFA_16075 IPR022831 Multidrug resistance protein MdtB AFA_16075 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AFA_16075 IPR001036 Acriflavin resistance protein AFA_16080 IPR006143 RND efflux pump, membrane fusion protein AFA_16080 IPR022824 Multidrug resistance protein MdtA AFA_16080 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AFA_16085 IPR036268 ZapD domain superfamily AFA_16085 IPR027462 Z ring-associated protein D, C-terminal AFA_16085 IPR009777 Cell division protein ZapD AFA_16090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16090 IPR001977 Dephospho-CoA kinase AFA_16100 IPR011006 CheY-like superfamily AFA_16100 IPR016032 Signal transduction response regulator, C-terminal effector AFA_16100 IPR001789 Signal transduction response regulator, receiver domain AFA_16100 IPR000792 Transcription regulator LuxR, C-terminal AFA_16105 IPR004821 Cytidyltransferase-like domain AFA_16105 IPR003721 Pantoate-beta-alanine ligase AFA_16105 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain AFA_16105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_16110 IPR003768 Segregation and condensation protein A AFA_16120 IPR020846 Major facilitator superfamily domain AFA_16120 IPR004638 Drug resistance transporter EmrB-like AFA_16120 IPR011701 Major facilitator superfamily AFA_16120 IPR036259 MFS transporter superfamily AFA_16145 IPR033706 Methionine synthase, B12-binding domain AFA_16145 IPR011822 Cobalamin-dependent methionine synthase AFA_16145 IPR036594 Methionine synthase domain AFA_16145 IPR000489 Pterin-binding domain AFA_16145 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily AFA_16145 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AFA_16145 IPR006158 Cobalamin (vitamin B12)-binding domain AFA_16145 IPR036724 Cobalamin-binding domain superfamily AFA_16145 IPR011005 Dihydropteroate synthase-like AFA_16145 IPR003726 Homocysteine-binding domain AFA_16145 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AFA_16145 IPR036589 Homocysteine-binding domain superfamily AFA_16150 IPR039426 Vitamin B12 transporter BtuB-like AFA_16150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_16150 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_16150 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_16150 IPR010101 TonB-dependent vitamin B12 transporter BtuB AFA_16150 IPR012910 TonB-dependent receptor, plug domain AFA_16155 IPR023544 ABC transporter, vitamin B12-binding protein AFA_16155 IPR002491 ABC transporter periplasmic binding domain AFA_16160 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_16160 IPR039423 TonB-dependent receptor-like AFA_16160 IPR010105 TonB-dependent siderophore receptor AFA_16160 IPR011662 Secretin/TonB, short N-terminal domain AFA_16160 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_16160 IPR012910 TonB-dependent receptor, plug domain AFA_16160 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_16160 IPR010917 TonB-dependent receptor, conserved site AFA_16170 IPR039425 RNA polymerase sigma-70 like AFA_16170 IPR014284 RNA polymerase sigma-70 like domain AFA_16170 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AFA_16170 IPR007627 RNA polymerase sigma-70 region 2 AFA_16170 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AFA_16170 IPR013325 RNA polymerase sigma factor, region 2 AFA_16170 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_16170 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_16180 IPR033983 Thiazole synthase ThiG AFA_16180 IPR013785 Aldolase-type TIM barrel AFA_16180 IPR008867 Thiazole synthase AFA_16185 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AFA_16185 IPR029056 Ribokinase-like AFA_16185 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AFA_16190 IPR010049 MTA/SAH nucleosidase AFA_16190 IPR000845 Nucleoside phosphorylase domain AFA_16190 IPR035994 Nucleoside phosphorylase superfamily AFA_16195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_16195 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AFA_16200 IPR010130 Type I secretion outer membrane protein, TolC AFA_16200 IPR003423 Outer membrane efflux protein AFA_16205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_16205 IPR011914 RfaE bifunctional protein, domain II AFA_16205 IPR004821 Cytidyltransferase-like domain AFA_16215 IPR011009 Protein kinase-like domain superfamily AFA_16215 IPR004147 UbiB domain AFA_16215 IPR000719 Protein kinase domain AFA_16215 IPR010232 Probable protein kinase UbiB AFA_16230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_16230 IPR004033 UbiE/COQ5 methyltransferase AFA_16230 IPR023576 UbiE/COQ5 methyltransferase, conserved site AFA_16235 IPR011006 CheY-like superfamily AFA_16235 IPR001789 Signal transduction response regulator, receiver domain AFA_16235 IPR039420 Transcriptional regulatory protein WalR-like AFA_16235 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_16235 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_16235 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB AFA_16240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_16240 IPR021766 Phosphate regulon sensor protein PhoR AFA_16240 IPR013767 PAS fold AFA_16240 IPR035965 PAS domain superfamily AFA_16240 IPR000014 PAS domain AFA_16240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_16240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_16240 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AFA_16240 IPR003594 Histidine kinase/HSP90-like ATPase AFA_16240 IPR005467 Histidine kinase domain AFA_16240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_16250 IPR010016 KipI family AFA_16250 IPR029000 Cyclophilin-like domain superfamily AFA_16250 IPR003833 Carboxyltransferase domain, subdomain C and D AFA_16255 IPR003778 Carboxyltransferase domain, subdomain A and B AFA_16255 IPR029000 Cyclophilin-like domain superfamily AFA_16260 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_16260 IPR005787 Threonine dehydratase, biosynthetic AFA_16260 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_16260 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AFA_16260 IPR001721 Threonine dehydratase, ACT-like domain AFA_16260 IPR038110 Threonine dehydratase, ACT-like domain superfamily AFA_16265 IPR032816 SNARE associated Golgi protein AFA_16280 IPR015500 Peptidase S8, subtilisin-related AFA_16280 IPR000209 Peptidase S8/S53 domain AFA_16280 IPR005546 Autotransporter beta-domain AFA_16280 IPR036709 Autotransporter beta-domain superfamily AFA_16280 IPR023828 Peptidase S8, subtilisin, Ser-active site AFA_16280 IPR036852 Peptidase S8/S53 domain superfamily AFA_16280 IPR034061 Autotransporter serine protease peptidase domain AFA_16285 IPR034061 Autotransporter serine protease peptidase domain AFA_16285 IPR036709 Autotransporter beta-domain superfamily AFA_16285 IPR013425 Autotransporter-associated beta strand repeat AFA_16285 IPR006315 Outer membrane autotransporter barrel AFA_16285 IPR000209 Peptidase S8/S53 domain AFA_16285 IPR036852 Peptidase S8/S53 domain superfamily AFA_16285 IPR022398 Peptidase S8, subtilisin, His-active site AFA_16285 IPR023828 Peptidase S8, subtilisin, Ser-active site AFA_16285 IPR015500 Peptidase S8, subtilisin-related AFA_16285 IPR005546 Autotransporter beta-domain AFA_16285 IPR011050 Pectin lyase fold/virulence factor AFA_16290 IPR011050 Pectin lyase fold/virulence factor AFA_16290 IPR023828 Peptidase S8, subtilisin, Ser-active site AFA_16290 IPR015500 Peptidase S8, subtilisin-related AFA_16290 IPR013425 Autotransporter-associated beta strand repeat AFA_16290 IPR036709 Autotransporter beta-domain superfamily AFA_16290 IPR022398 Peptidase S8, subtilisin, His-active site AFA_16290 IPR005546 Autotransporter beta-domain AFA_16290 IPR036852 Peptidase S8/S53 domain superfamily AFA_16290 IPR000209 Peptidase S8/S53 domain AFA_16290 IPR006315 Outer membrane autotransporter barrel AFA_16290 IPR034061 Autotransporter serine protease peptidase domain AFA_16295 IPR023828 Peptidase S8, subtilisin, Ser-active site AFA_16295 IPR036709 Autotransporter beta-domain superfamily AFA_16295 IPR015500 Peptidase S8, subtilisin-related AFA_16295 IPR034061 Autotransporter serine protease peptidase domain AFA_16295 IPR000209 Peptidase S8/S53 domain AFA_16295 IPR036852 Peptidase S8/S53 domain superfamily AFA_16295 IPR005546 Autotransporter beta-domain AFA_16300 IPR029057 Phosphoribosyltransferase-like AFA_16300 IPR000836 Phosphoribosyltransferase domain AFA_16300 IPR005764 Adenine phosphoribosyl transferase AFA_16305 IPR036640 ABC transporter type 1, transmembrane domain superfamily AFA_16305 IPR011527 ABC transporter type 1, transmembrane domain AFA_16305 IPR003593 AAA+ ATPase domain AFA_16305 IPR003439 ABC transporter-like AFA_16305 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC AFA_16305 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16305 IPR017871 ABC transporter, conserved site AFA_16310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16310 IPR017871 ABC transporter, conserved site AFA_16310 IPR011527 ABC transporter type 1, transmembrane domain AFA_16310 IPR036640 ABC transporter type 1, transmembrane domain superfamily AFA_16310 IPR003439 ABC transporter-like AFA_16310 IPR003593 AAA+ ATPase domain AFA_16310 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD AFA_16310 IPR039421 Type I protein exporter AFA_16315 IPR012994 Membrane bound YbgT-like AFA_16315 IPR011724 Cyd operon protein YbgT AFA_16320 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AFA_16325 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AFA_16335 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AFA_16335 IPR035474 KpsF-like, SIS domain AFA_16335 IPR001347 Sugar isomerase (SIS) AFA_16335 IPR000644 CBS domain AFA_16340 IPR023214 HAD superfamily AFA_16340 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AFA_16340 IPR036412 HAD-like superfamily AFA_16340 IPR010023 KdsC family AFA_16355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16355 IPR003439 ABC transporter-like AFA_16355 IPR003593 AAA+ ATPase domain AFA_16355 IPR030921 LPS export ABC transporter, ATP-binding protein LptB AFA_16355 IPR017871 ABC transporter, conserved site AFA_16360 IPR036567 Ribosome hibernation promotion factor-like AFA_16360 IPR003489 Ribosome hibernation promoting factor/RaiA AFA_16365 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN AFA_16365 IPR002178 PTS EIIA type-2 domain AFA_16365 IPR016152 Phosphotransferase/anion transporter AFA_16370 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AFA_16370 IPR011104 HPr kinase/phosphorylase, C-terminal AFA_16370 IPR003755 HPr(Ser) kinase/phosphorylase AFA_16370 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal AFA_16375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16375 IPR005337 RapZ-like family AFA_16380 IPR007730 Sporulation-like domain AFA_16380 IPR036680 Sporulation-like domain superfamily AFA_16380 IPR034718 Endolytic peptidoglycan transglycosylase RlpA AFA_16380 IPR009009 RlpA-like protein, double-psi beta-barrel domain AFA_16380 IPR012997 Rare lipoprotein A AFA_16380 IPR036908 RlpA-like domain superfamily AFA_16385 IPR000878 Tetrapyrrole methylase AFA_16385 IPR035996 Tetrapyrrole methylase superfamily AFA_16385 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AFA_16385 IPR014777 Tetrapyrrole methylase, subdomain 1 AFA_16385 IPR014776 Tetrapyrrole methylase, subdomain 2 AFA_16385 IPR008189 rRNA small subunit methyltransferase I AFA_16390 IPR003509 Uncharacterised protein family UPF0102 AFA_16390 IPR011335 Restriction endonuclease type II-like AFA_16390 IPR011856 tRNA endonuclease-like domain superfamily AFA_16395 IPR001347 Sugar isomerase (SIS) AFA_16395 IPR004515 Phosphoheptose isomerase AFA_16395 IPR035461 GmhA/DiaA AFA_16405 IPR013766 Thioredoxin domain AFA_16405 IPR023555 Thiol-disulphide oxidoreductase ResA AFA_16405 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AFA_16405 IPR036249 Thioredoxin-like superfamily AFA_16410 IPR036393 Acetylglutamate kinase-like superfamily AFA_16410 IPR001048 Aspartate/glutamate/uridylate kinase AFA_16410 IPR004662 Acetylglutamate kinase family AFA_16410 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AFA_16410 IPR001057 Glutamate/acetylglutamate kinase AFA_16410 IPR037528 Acetylglutamate kinase ArgB AFA_16420 IPR035985 Ubiquitin-activating enzyme AFA_16420 IPR000594 THIF-type NAD/FAD binding fold AFA_16420 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF AFA_16425 IPR001478 PDZ domain AFA_16425 IPR029045 ClpP/crotonase-like domain superfamily AFA_16425 IPR005151 Tail specific protease AFA_16425 IPR036034 PDZ superfamily AFA_16425 IPR004447 C-terminal-processing peptidase S41A AFA_16430 IPR011055 Duplicated hybrid motif AFA_16430 IPR016047 Peptidase M23 AFA_16435 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AFA_16435 IPR029033 Histidine phosphatase superfamily AFA_16435 IPR013078 Histidine phosphatase superfamily, clade-1 AFA_16435 IPR005952 Phosphoglycerate mutase 1 AFA_16440 IPR001763 Rhodanese-like domain AFA_16440 IPR036873 Rhodanese-like domain superfamily AFA_16445 IPR036249 Thioredoxin-like superfamily AFA_16445 IPR011900 Glutaredoxin, GrxC AFA_16445 IPR011767 Glutaredoxin active site AFA_16445 IPR014025 Glutaredoxin subgroup AFA_16445 IPR002109 Glutaredoxin AFA_16450 IPR035958 SecB-like superfamily AFA_16450 IPR003708 Bacterial protein export chaperone SecB AFA_16455 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_16455 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AFA_16455 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AFA_16455 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AFA_16455 IPR036291 NAD(P)-binding domain superfamily AFA_16455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_16460 IPR042100 Bordetella uptake gene, domain 1 AFA_16460 IPR005064 Bordetella uptake gene AFA_16465 IPR029028 Alpha/beta knot methyltransferases AFA_16465 IPR001537 tRNA/rRNA methyltransferase, SpoU type AFA_16465 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AFA_16465 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AFA_16470 IPR029057 Phosphoribosyltransferase-like AFA_16470 IPR005222 Competence protein ComF AFA_16470 IPR000836 Phosphoribosyltransferase domain AFA_16475 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AFA_16475 IPR013216 Methyltransferase type 11 AFA_16475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_16480 IPR034964 Lumazine synthase AFA_16480 IPR002180 Lumazine/riboflavin synthase AFA_16480 IPR036467 Lumazine/riboflavin synthase superfamily AFA_16485 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_16485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16485 IPR009057 Homeobox-like domain superfamily AFA_16485 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_16485 IPR011006 CheY-like superfamily AFA_16485 IPR003593 AAA+ ATPase domain AFA_16485 IPR001789 Signal transduction response regulator, receiver domain AFA_16485 IPR025944 Sigma-54 interaction domain, conserved site AFA_16485 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_16485 IPR002197 DNA binding HTH domain, Fis-type AFA_16490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_16490 IPR003594 Histidine kinase/HSP90-like ATPase AFA_16490 IPR003660 HAMP domain AFA_16490 IPR005467 Histidine kinase domain AFA_16490 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_16490 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AFA_16500 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AFA_16500 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AFA_16500 IPR035926 NusB-like superfamily AFA_16500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_16500 IPR023267 RNA (C5-cytosine) methyltransferase AFA_16500 IPR004573 rRNA small subunit methyltransferase B AFA_16500 IPR006027 NusB/RsmB/TIM44 AFA_16500 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae AFA_16505 IPR007197 Radical SAM AFA_16505 IPR023404 Radical SAM, alpha/beta horseshoe AFA_16505 IPR006638 Elp3/MiaB/NifB AFA_16505 IPR020612 Methylthiotransferase, conserved site AFA_16505 IPR041582 RimO, TRAM domain AFA_16505 IPR005839 Methylthiotransferase AFA_16505 IPR013848 Methylthiotransferase, N-terminal AFA_16505 IPR005840 Ribosomal protein S12 methylthiotransferase RimO AFA_16505 IPR002792 TRAM domain AFA_16505 IPR038135 Methylthiotransferase, N-terminal domain superfamily AFA_16510 IPR011004 Trimeric LpxA-like superfamily AFA_16510 IPR001451 Hexapeptide repeat AFA_16515 IPR005886 UDP-glucose 4-epimerase AFA_16515 IPR036291 NAD(P)-binding domain superfamily AFA_16515 IPR016040 NAD(P)-binding domain AFA_16520 IPR028615 Maleate isomerase AFA_16520 IPR026286 Maleate isomerase/Arylmalonate decarboxylase AFA_16525 IPR000847 Transcription regulator HTH, LysR AFA_16525 IPR005119 LysR, substrate-binding AFA_16525 IPR036390 Winged helix DNA-binding domain superfamily AFA_16525 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_16530 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase AFA_16530 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_16530 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AFA_16530 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales AFA_16530 IPR040442 Pyruvate kinase-like domain superfamily AFA_16535 IPR015859 ABC transporter, taurine import, TauD AFA_16535 IPR003593 AAA+ ATPase domain AFA_16535 IPR003439 ABC transporter-like AFA_16535 IPR017871 ABC transporter, conserved site AFA_16535 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_16540 IPR035906 MetI-like superfamily AFA_16550 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase AFA_16550 IPR001173 Glycosyltransferase 2-like AFA_16550 IPR029044 Nucleotide-diphospho-sugar transferases AFA_16555 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AFA_16555 IPR001296 Glycosyl transferase, family 1 AFA_16565 IPR003362 Bacterial sugar transferase AFA_16565 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AFA_16585 IPR005888 dTDP-glucose 4,6-dehydratase AFA_16585 IPR036291 NAD(P)-binding domain superfamily AFA_16585 IPR016040 NAD(P)-binding domain AFA_16590 IPR005835 Nucleotidyl transferase domain AFA_16590 IPR029044 Nucleotide-diphospho-sugar transferases AFA_16590 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AFA_16595 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AFA_16595 IPR014710 RmlC-like jelly roll fold AFA_16595 IPR011051 RmlC-like cupin domain superfamily AFA_16600 IPR029903 RmlD-like substrate binding domain AFA_16600 IPR036291 NAD(P)-binding domain superfamily AFA_16600 IPR005913 dTDP-4-dehydrorhamnose reductase family AFA_16605 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit AFA_16605 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal AFA_16605 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily AFA_16605 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal AFA_16610 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AFA_16610 IPR003593 AAA+ ATPase domain AFA_16610 IPR005722 ATP synthase, F1 complex, beta subunit AFA_16610 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AFA_16610 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AFA_16610 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AFA_16610 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal AFA_16610 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16615 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily AFA_16615 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site AFA_16615 IPR000131 ATP synthase, F1 complex, gamma subunit AFA_16620 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AFA_16620 IPR000793 ATP synthase, alpha subunit, C-terminal AFA_16620 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AFA_16620 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AFA_16620 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AFA_16620 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AFA_16620 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily AFA_16620 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16620 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain AFA_16620 IPR005294 ATP synthase, F1 complex, alpha subunit AFA_16625 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily AFA_16625 IPR000711 ATPase, OSCP/delta subunit AFA_16630 IPR005864 ATP synthase, F0 complex, subunit b, bacterial AFA_16630 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AFA_16630 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast AFA_16635 IPR035921 F/V-ATP synthase subunit C superfamily AFA_16635 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast AFA_16635 IPR000454 ATP synthase, F0 complex, subunit C AFA_16635 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site AFA_16635 IPR002379 V-ATPase proteolipid subunit C-like domain AFA_16635 IPR038662 F1F0 ATP synthase subunit C superfamily AFA_16640 IPR000568 ATP synthase, F0 complex, subunit A AFA_16640 IPR035908 ATP synthase, F0 complex, subunit A superfamily AFA_16640 IPR023011 ATP synthase, F0 complex, subunit A, active site AFA_16650 IPR029045 ClpP/crotonase-like domain superfamily AFA_16650 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_16650 IPR001753 Enoyl-CoA hydratase/isomerase AFA_16650 IPR014748 Enoyl-CoA hydratase, C-terminal AFA_16665 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type AFA_16665 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase AFA_16665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AFA_16665 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AFA_16670 IPR036551 Flavin prenyltransferase-like AFA_16670 IPR003382 Flavoprotein AFA_16670 IPR004507 Flavin prenyltransferase UbiX-like AFA_16675 IPR036249 Thioredoxin-like superfamily AFA_16675 IPR004480 Monothiol glutaredoxin-related AFA_16675 IPR014434 Monothiol glutaredoxin AFA_16675 IPR033658 Glutaredoxin, PICOT-like AFA_16675 IPR002109 Glutaredoxin AFA_16680 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AFA_16680 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AFA_16680 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AFA_16680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_16680 IPR007848 Methyltransferase small domain AFA_16680 IPR004556 Methyltransferase HemK-like AFA_16685 IPR004373 Peptide chain release factor 1 AFA_16685 IPR000352 Peptide chain release factor class I AFA_16685 IPR005139 Peptide chain release factor AFA_16690 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AFA_16690 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AFA_16690 IPR036291 NAD(P)-binding domain superfamily AFA_16690 IPR018214 Glutamyl-tRNA reductase, conserved site AFA_16690 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily AFA_16690 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily AFA_16690 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AFA_16690 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AFA_16700 IPR000160 GGDEF domain AFA_16700 IPR029787 Nucleotide cyclase AFA_16715 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_16715 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_16715 IPR039423 TonB-dependent receptor-like AFA_16715 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_16715 IPR010105 TonB-dependent siderophore receptor AFA_16715 IPR010917 TonB-dependent receptor, conserved site AFA_16715 IPR012910 TonB-dependent receptor, plug domain AFA_16715 IPR010916 TonB box, conserved site AFA_16735 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone AFA_16735 IPR001424 Superoxide dismutase, copper/zinc binding domain AFA_16735 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily AFA_16735 IPR018152 Superoxide dismutase, copper/zinc, binding site AFA_16745 IPR007820 AbrB family AFA_16745 IPR017516 AbrB duplication AFA_16750 IPR002823 Protein of unknown function DUF112, transmembrane AFA_16765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_16765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_16765 IPR005467 Histidine kinase domain AFA_16765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_16765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_16765 IPR003660 HAMP domain AFA_16765 IPR003594 Histidine kinase/HSP90-like ATPase AFA_16765 IPR006290 Heavy metal sensor kinase AFA_16770 IPR011006 CheY-like superfamily AFA_16770 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_16770 IPR039420 Transcriptional regulatory protein WalR-like AFA_16770 IPR001789 Signal transduction response regulator, receiver domain AFA_16770 IPR016032 Signal transduction response regulator, C-terminal effector AFA_16770 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_16775 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_16775 IPR036390 Winged helix DNA-binding domain superfamily AFA_16775 IPR000847 Transcription regulator HTH, LysR AFA_16775 IPR005119 LysR, substrate-binding AFA_16780 IPR036259 MFS transporter superfamily AFA_16780 IPR005829 Sugar transporter, conserved site AFA_16780 IPR004736 MFS transporter, metabolite:H symporter AFA_16780 IPR020846 Major facilitator superfamily domain AFA_16780 IPR015041 Osmosensory transporter coiled coil AFA_16780 IPR036292 Proline/betaine transporter ProP, C-terminal AFA_16780 IPR005828 Major facilitator, sugar transporter-like AFA_16785 IPR003010 Carbon-nitrogen hydrolase AFA_16785 IPR036526 Carbon-nitrogen hydrolase superfamily AFA_16785 IPR000132 Nitrilase/cyanide hydratase, conserved site AFA_16805 IPR003593 AAA+ ATPase domain AFA_16805 IPR003439 ABC transporter-like AFA_16805 IPR017871 ABC transporter, conserved site AFA_16805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16805 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AFA_16830 IPR009010 Aspartate decarboxylase-like domain superfamily AFA_16830 IPR006443 Formate dehydrogenase-N, alpha subunit AFA_16830 IPR006657 Molybdopterin dinucleotide-binding domain AFA_16830 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AFA_16830 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AFA_16830 IPR006656 Molybdopterin oxidoreductase AFA_16830 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AFA_16830 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_16835 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_16835 IPR009010 Aspartate decarboxylase-like domain superfamily AFA_16835 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AFA_16835 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AFA_16835 IPR006656 Molybdopterin oxidoreductase AFA_16835 IPR006657 Molybdopterin dinucleotide-binding domain AFA_16835 IPR006443 Formate dehydrogenase-N, alpha subunit AFA_16835 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AFA_16840 IPR015246 Formate dehydrogenase, transmembrane AFA_16840 IPR014603 Formate dehydrogenase iron-sulphur subunit AFA_16840 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AFA_16840 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_16840 IPR038384 Formate dehydrogenase, C-terminal domain superfamily AFA_16840 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria AFA_16845 IPR006471 Formate dehydrogenase, gamma subunit AFA_16845 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AFA_16845 IPR016174 Di-haem cytochrome, transmembrane AFA_16850 IPR024064 FdhE-like superfamily AFA_16850 IPR006452 Formate dehydrogenase accessory protein AFA_16855 IPR004534 L-seryl-tRNA(Sec) selenium transferase AFA_16855 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain AFA_16855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_16855 IPR015424 Pyridoxal phosphate-dependent transferase AFA_16855 IPR018319 L-seryl-tRNA selenium transferase-like AFA_16860 IPR015191 Translation elongation factor SelB, winged helix, type 3 AFA_16860 IPR031157 Tr-type G domain, conserved site AFA_16860 IPR004161 Translation elongation factor EFTu-like, domain 2 AFA_16860 IPR036390 Winged helix DNA-binding domain superfamily AFA_16860 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16860 IPR015190 Translation elongation factor SelB, winged helix, type 2 AFA_16860 IPR009000 Translation protein, beta-barrel domain superfamily AFA_16860 IPR004535 Translation elongation factor, selenocysteine-specific AFA_16860 IPR000795 Transcription factor, GTP-binding domain AFA_16860 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_16860 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AFA_16870 IPR001387 Cro/C1-type helix-turn-helix domain AFA_16870 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AFA_16875 IPR001303 Class II aldolase/adducin N-terminal AFA_16875 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AFA_16885 IPR005064 Bordetella uptake gene AFA_16885 IPR042100 Bordetella uptake gene, domain 1 AFA_16890 IPR012910 TonB-dependent receptor, plug domain AFA_16890 IPR010917 TonB-dependent receptor, conserved site AFA_16890 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_16890 IPR010105 TonB-dependent siderophore receptor AFA_16890 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_16890 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_16890 IPR039426 Vitamin B12 transporter BtuB-like AFA_16900 IPR039423 TonB-dependent receptor-like AFA_16900 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_16900 IPR011662 Secretin/TonB, short N-terminal domain AFA_16900 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_16900 IPR012910 TonB-dependent receptor, plug domain AFA_16900 IPR010105 TonB-dependent siderophore receptor AFA_16900 IPR010917 TonB-dependent receptor, conserved site AFA_16900 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_16905 IPR004536 Selenophosphate synthetase AFA_16905 IPR023061 Selenophosphate synthetase, class I AFA_16905 IPR036921 PurM-like, N-terminal domain superfamily AFA_16905 IPR016188 PurM-like, N-terminal domain AFA_16905 IPR036676 PurM-like, C-terminal domain superfamily AFA_16905 IPR010918 PurM-like, C-terminal domain AFA_16910 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase AFA_16910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16910 IPR036873 Rhodanese-like domain superfamily AFA_16910 IPR001763 Rhodanese-like domain AFA_16915 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AFA_16915 IPR007329 FMN-binding AFA_16915 IPR011399 Nitrous oxide reductase expression regulator NosR AFA_16920 IPR008972 Cupredoxin AFA_16920 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_16920 IPR028096 EfeO-type cupredoxin-like domain AFA_16920 IPR041142 Nitrous oxide reductase, propeller repeat 2 AFA_16920 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AFA_16920 IPR041114 Nitrous oxide reductase, propeller repeat 1 AFA_16920 IPR023644 Nitrous-oxide reductase AFA_16920 IPR011045 Nitrous oxide reductase, N-terminal AFA_16920 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AFA_16925 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AFA_16925 IPR012334 Pectin lyase fold AFA_16925 IPR006626 Parallel beta-helix repeat AFA_16925 IPR022441 Parallel beta-helix repeat-2 AFA_16925 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain AFA_16925 IPR026464 Nitrous oxide reductase family maturation protein NosD AFA_16925 IPR011050 Pectin lyase fold/virulence factor AFA_16930 IPR017871 ABC transporter, conserved site AFA_16930 IPR003439 ABC transporter-like AFA_16930 IPR003593 AAA+ ATPase domain AFA_16930 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_16935 IPR032688 ABC-2 family transporter protein AFA_16950 IPR018189 Phosphoglucose isomerase, conserved site AFA_16950 IPR035476 Phosphoglucose isomerase, SIS domain 1 AFA_16950 IPR035482 Phosphoglucose isomerase, SIS domain 2 AFA_16950 IPR023096 Phosphoglucose isomerase, C-terminal AFA_16950 IPR001672 Phosphoglucose isomerase (PGI) AFA_16970 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_16970 IPR036291 NAD(P)-binding domain superfamily AFA_16970 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_16975 IPR029044 Nucleotide-diphospho-sugar transferases AFA_16985 IPR011835 Bacterial/plant glycogen synthase AFA_16985 IPR001296 Glycosyl transferase, family 1 AFA_16985 IPR013534 Starch synthase, catalytic domain AFA_17010 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC AFA_17010 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AFA_17010 IPR036291 NAD(P)-binding domain superfamily AFA_17010 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AFA_17010 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AFA_17010 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AFA_17010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_17010 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase AFA_17010 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AFA_17015 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain AFA_17015 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like AFA_17025 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD AFA_17030 IPR003593 AAA+ ATPase domain AFA_17030 IPR003439 ABC transporter-like AFA_17030 IPR017871 ABC transporter, conserved site AFA_17030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_17035 IPR000412 ABC-2 transporter AFA_17035 IPR013525 ABC-2 type transporter AFA_17040 IPR003715 Polysaccharide export protein AFA_17045 IPR015424 Pyridoxal phosphate-dependent transferase AFA_17045 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AFA_17045 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type AFA_17045 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_17045 IPR004839 Aminotransferase, class I/classII AFA_17045 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_17045 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AFA_17050 IPR020843 Polyketide synthase, enoylreductase domain AFA_17050 IPR006162 Phosphopantetheine attachment site AFA_17050 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AFA_17050 IPR014043 Acyl transferase AFA_17050 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AFA_17050 IPR013154 Alcohol dehydrogenase, N-terminal AFA_17050 IPR011032 GroES-like superfamily AFA_17050 IPR018201 Beta-ketoacyl synthase, active site AFA_17050 IPR013968 Polyketide synthase, ketoreductase domain AFA_17050 IPR014030 Beta-ketoacyl synthase, N-terminal AFA_17050 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AFA_17050 IPR036291 NAD(P)-binding domain superfamily AFA_17050 IPR032821 Ketoacyl-synthetase, C-terminal extension AFA_17050 IPR014031 Beta-ketoacyl synthase, C-terminal AFA_17050 IPR016039 Thiolase-like AFA_17050 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AFA_17050 IPR036736 ACP-like superfamily AFA_17050 IPR042104 Polyketide synthase, dehydratase domain superfamily AFA_17050 IPR009081 Phosphopantetheine binding ACP domain AFA_17050 IPR020807 Polyketide synthase, dehydratase domain AFA_17055 IPR006043 Xanthine/uracil/vitamin C permease AFA_17055 IPR017588 Uric acid permease UacT-like AFA_17055 IPR006042 Xanthine/uracil permease AFA_17060 IPR000620 EamA domain AFA_17065 IPR004839 Aminotransferase, class I/classII AFA_17065 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17065 IPR015424 Pyridoxal phosphate-dependent transferase AFA_17065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_17065 IPR000524 Transcription regulator HTH, GntR AFA_17065 IPR036390 Winged helix DNA-binding domain superfamily AFA_17065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_17070 IPR000620 EamA domain AFA_17080 IPR020613 Thiolase, conserved site AFA_17080 IPR020617 Thiolase, C-terminal AFA_17080 IPR020610 Thiolase, active site AFA_17080 IPR002155 Thiolase AFA_17080 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_17080 IPR020616 Thiolase, N-terminal AFA_17080 IPR016039 Thiolase-like AFA_17085 IPR029045 ClpP/crotonase-like domain superfamily AFA_17085 IPR036291 NAD(P)-binding domain superfamily AFA_17085 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_17085 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_17085 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AFA_17085 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AFA_17085 IPR001753 Enoyl-CoA hydratase/isomerase AFA_17100 IPR003593 AAA+ ATPase domain AFA_17100 IPR003439 ABC transporter-like AFA_17100 IPR017871 ABC transporter, conserved site AFA_17100 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AFA_17100 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_17105 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AFA_17105 IPR030802 ABC transporter permease MalE AFA_17110 IPR003399 Mce/MlaD AFA_17110 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD AFA_17125 IPR017871 ABC transporter, conserved site AFA_17125 IPR003593 AAA+ ATPase domain AFA_17125 IPR003439 ABC transporter-like AFA_17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_17130 IPR013525 ABC-2 type transporter AFA_17130 IPR000412 ABC-2 transporter AFA_17140 IPR036968 Enolpyruvate transferase domain superfamily AFA_17140 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AFA_17140 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AFA_17140 IPR001986 Enolpyruvate transferase domain AFA_17145 IPR018198 ATP phosphoribosyltransferase, conserved site AFA_17145 IPR024893 ATP phosphoribosyltransferase HisG, short form AFA_17145 IPR001348 ATP phosphoribosyltransferase HisG AFA_17145 IPR013820 ATP phosphoribosyltransferase, catalytic domain AFA_17150 IPR016161 Aldehyde/histidinol dehydrogenase AFA_17150 IPR001692 Histidinol dehydrogenase, conserved site AFA_17150 IPR022695 Histidinol dehydrogenase, monofunctional AFA_17150 IPR012131 Histidinol dehydrogenase AFA_17155 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_17155 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AFA_17155 IPR000807 Imidazoleglycerol-phosphate dehydratase AFA_17155 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily AFA_17160 IPR017926 Glutamine amidotransferase AFA_17160 IPR010139 Imidazole glycerol phosphate synthase, subunit H AFA_17160 IPR029062 Class I glutamine amidotransferase-like AFA_17165 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AFA_17165 IPR013785 Aldolase-type TIM barrel AFA_17165 IPR011060 Ribulose-phosphate binding barrel AFA_17165 IPR006062 Histidine biosynthesis AFA_17165 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AFA_17170 IPR013785 Aldolase-type TIM barrel AFA_17170 IPR006062 Histidine biosynthesis AFA_17170 IPR011060 Ribulose-phosphate binding barrel AFA_17170 IPR004651 Histidine biosynthesis, HisF AFA_17175 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AFA_17175 IPR026660 Phosphoribosyl-AMP cyclohydrolase AFA_17175 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AFA_17180 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AFA_17180 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AFA_17185 IPR011146 HIT-like domain AFA_17185 IPR019808 Histidine triad, conserved site AFA_17185 IPR001310 Histidine triad (HIT) protein AFA_17185 IPR036265 HIT-like superfamily AFA_17190 IPR003369 Sec-independent protein translocase protein TatA/B/E AFA_17190 IPR006312 Sec-independent protein translocase protein TatA/E AFA_17195 IPR018448 Twin-arginine translocation protein TatB AFA_17195 IPR003369 Sec-independent protein translocase protein TatA/B/E AFA_17200 IPR002033 Sec-independent periplasmic protein translocase TatC AFA_17200 IPR019820 Sec-independent periplasmic protein translocase, conserved site AFA_17205 IPR009003 Peptidase S1, PA clan AFA_17205 IPR001940 Peptidase S1C AFA_17205 IPR011782 Peptidase S1C, Do AFA_17205 IPR036034 PDZ superfamily AFA_17205 IPR001478 PDZ domain AFA_17210 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AFA_17210 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AFA_17215 IPR001185 Large-conductance mechanosensitive channel AFA_17215 IPR036019 Gated mechanosensitive channel AFA_17215 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AFA_17220 IPR014349 Rieske iron-sulphur protein AFA_17220 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit AFA_17220 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal AFA_17220 IPR005805 Rieske iron-sulphur protein, C-terminal AFA_17220 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_17220 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_17225 IPR027387 Cytochrome b/b6-like domain superfamily AFA_17225 IPR036150 Cytochrome b/b6, C-terminal domain superfamily AFA_17225 IPR030689 Cytochrome b AFA_17225 IPR016174 Di-haem cytochrome, transmembrane AFA_17225 IPR005797 Cytochrome b/b6, N-terminal AFA_17225 IPR005798 Cytochrome b/b6, C-terminal AFA_17230 IPR009056 Cytochrome c-like domain AFA_17230 IPR036909 Cytochrome c-like domain superfamily AFA_17230 IPR002326 Cytochrome c1 AFA_17235 IPR040079 Glutathione Transferase family AFA_17235 IPR004045 Glutathione S-transferase, N-terminal AFA_17235 IPR004046 Glutathione S-transferase, C-terminal AFA_17235 IPR034341 Stringent starvation protein A, N-terminal AFA_17235 IPR036249 Thioredoxin-like superfamily AFA_17235 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_17235 IPR010987 Glutathione S-transferase, C-terminal-like AFA_17240 IPR007481 Stringent starvation protein B AFA_17240 IPR036760 SspB-like superfamily AFA_17245 IPR011866 Sulphate ABC transporter, permease protein CysW AFA_17245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_17245 IPR035906 MetI-like superfamily AFA_17245 IPR005667 Sulphate ABC transporter permease protein 2 AFA_17250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_17250 IPR011865 Sulphate ABC transporter, permease protein CysT AFA_17250 IPR005667 Sulphate ABC transporter permease protein 2 AFA_17250 IPR035906 MetI-like superfamily AFA_17255 IPR000957 Sulphate/thiosulphate-binding, conserved site AFA_17255 IPR034408 Sulphate/thiosulphate-binding site AFA_17255 IPR005669 Thiosulphate/Sulfate-binding protein AFA_17285 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AFA_17285 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AFA_17285 IPR036291 NAD(P)-binding domain superfamily AFA_17295 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AFA_17295 IPR004681 TRAP transporter large membrane protein DctM AFA_17305 IPR041721 Lactate-binding periplasmic protein TTHA0766 AFA_17305 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_17305 IPR018389 TRAP transporter solute receptor DctP/TeaA AFA_17305 IPR038404 TRAP transporter solute receptor DctP superfamily AFA_17305 IPR026289 Solute binding protein, TakP-like AFA_17310 IPR001509 NAD-dependent epimerase/dehydratase AFA_17310 IPR036291 NAD(P)-binding domain superfamily AFA_17315 IPR026040 Hydroxypyruvate isomerase-like AFA_17315 IPR013022 Xylose isomerase-like, TIM barrel domain AFA_17315 IPR036237 Xylose isomerase-like superfamily AFA_17320 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AFA_17320 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_17320 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AFA_17320 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AFA_17320 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AFA_17320 IPR036291 NAD(P)-binding domain superfamily AFA_17320 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AFA_17325 IPR004404 Dihydroxy-acid dehydratase AFA_17325 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AFA_17325 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AFA_17325 IPR037237 IlvD/EDD, N-terminal domain AFA_17325 IPR042096 Dihydroxy-acid dehydratase, C-terminal AFA_17330 IPR036390 Winged helix DNA-binding domain superfamily AFA_17330 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17330 IPR000524 Transcription regulator HTH, GntR AFA_17330 IPR011711 GntR, C-terminal AFA_17330 IPR008920 Transcription regulator FadR/GntR, C-terminal AFA_17335 IPR011991 ArsR-like helix-turn-helix domain AFA_17335 IPR000485 AsnC-type HTH domain AFA_17335 IPR011008 Dimeric alpha-beta barrel AFA_17335 IPR019888 Transcription regulator AsnC-type AFA_17335 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AFA_17335 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AFA_17335 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17335 IPR036390 Winged helix DNA-binding domain superfamily AFA_17340 IPR017485 Tryptophan 2,3-dioxygenase, bacterial AFA_17340 IPR004981 Tryptophan 2,3-dioxygenase AFA_17340 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like AFA_17355 IPR005119 LysR, substrate-binding AFA_17355 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain AFA_17355 IPR000847 Transcription regulator HTH, LysR AFA_17355 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17355 IPR036390 Winged helix DNA-binding domain superfamily AFA_17360 IPR040442 Pyruvate kinase-like domain superfamily AFA_17360 IPR003700 Ketopantoate hydroxymethyltransferase AFA_17360 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AFA_17365 IPR018170 Aldo/keto reductase, conserved site AFA_17365 IPR020471 Aldo/keto reductase AFA_17365 IPR023210 NADP-dependent oxidoreductase domain AFA_17365 IPR036812 NADP-dependent oxidoreductase domain superfamily AFA_17370 IPR020846 Major facilitator superfamily domain AFA_17370 IPR011701 Major facilitator superfamily AFA_17370 IPR036259 MFS transporter superfamily AFA_17375 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AFA_17375 IPR018136 Aconitase family, 4Fe-4S cluster binding site AFA_17375 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AFA_17375 IPR036008 Aconitase, iron-sulfur domain AFA_17375 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AFA_17375 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AFA_17380 IPR000014 PAS domain AFA_17380 IPR029787 Nucleotide cyclase AFA_17380 IPR035965 PAS domain superfamily AFA_17380 IPR000160 GGDEF domain AFA_17380 IPR000700 PAS-associated, C-terminal AFA_17380 IPR013656 PAS fold-4 AFA_17385 IPR025714 Methyltransferase domain AFA_17385 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted AFA_17385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_17395 IPR003010 Carbon-nitrogen hydrolase AFA_17395 IPR036526 Carbon-nitrogen hydrolase superfamily AFA_17395 IPR001110 Uncharacterised protein family UPF0012, conserved site AFA_17400 IPR012338 Beta-lactamase/transpeptidase-like AFA_17400 IPR023650 Beta-lactamase, class-A active site AFA_17400 IPR000871 Beta-lactamase, class-A AFA_17410 IPR013108 Amidohydrolase 3 AFA_17410 IPR023100 D-aminoacylase, insert domain superfamily AFA_17410 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_17410 IPR032466 Metal-dependent hydrolase AFA_17415 IPR036390 Winged helix DNA-binding domain superfamily AFA_17415 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17415 IPR000847 Transcription regulator HTH, LysR AFA_17415 IPR005119 LysR, substrate-binding AFA_17420 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AFA_17420 IPR036291 NAD(P)-binding domain superfamily AFA_17420 IPR020904 Short-chain dehydrogenase/reductase, conserved site AFA_17420 IPR002347 Short-chain dehydrogenase/reductase SDR AFA_17425 IPR036380 Isochorismatase-like superfamily AFA_17425 IPR000868 Isochorismatase-like AFA_17430 IPR014710 RmlC-like jelly roll fold AFA_17430 IPR003829 Pirin, N-terminal domain AFA_17430 IPR008778 Pirin, C-terminal domain AFA_17430 IPR012093 Pirin AFA_17430 IPR011051 RmlC-like cupin domain superfamily AFA_17435 IPR036390 Winged helix DNA-binding domain superfamily AFA_17435 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17435 IPR000847 Transcription regulator HTH, LysR AFA_17435 IPR005119 LysR, substrate-binding AFA_17440 IPR008462 CsbD-like domain AFA_17440 IPR026042 Stress response protein YjbJ AFA_17440 IPR036629 YjbJ superfamily AFA_17445 IPR014004 Transport-associated and nodulation domain, bacteria AFA_17445 IPR007055 BON domain AFA_17450 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_17450 IPR020946 Flavin monooxygenase-like AFA_17455 IPR003593 AAA+ ATPase domain AFA_17455 IPR003018 GAF domain AFA_17455 IPR029016 GAF-like domain superfamily AFA_17455 IPR002197 DNA binding HTH domain, Fis-type AFA_17455 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_17455 IPR002078 RNA polymerase sigma factor 54 interaction domain AFA_17455 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AFA_17455 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AFA_17455 IPR025944 Sigma-54 interaction domain, conserved site AFA_17455 IPR009057 Homeobox-like domain superfamily AFA_17475 IPR011662 Secretin/TonB, short N-terminal domain AFA_17475 IPR039423 TonB-dependent receptor-like AFA_17475 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_17475 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_17475 IPR010917 TonB-dependent receptor, conserved site AFA_17475 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_17475 IPR012910 TonB-dependent receptor, plug domain AFA_17475 IPR010105 TonB-dependent siderophore receptor AFA_17485 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17485 IPR039425 RNA polymerase sigma-70 like AFA_17485 IPR014284 RNA polymerase sigma-70 like domain AFA_17485 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AFA_17485 IPR007627 RNA polymerase sigma-70 region 2 AFA_17485 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AFA_17485 IPR013325 RNA polymerase sigma factor, region 2 AFA_17485 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_17495 IPR017932 Glutamine amidotransferase type 2 domain AFA_17495 IPR035466 GlmS/AgaS, SIS domain 1 AFA_17495 IPR035490 GlmS/FrlB, SIS domain 2 AFA_17495 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AFA_17495 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_17495 IPR001347 Sugar isomerase (SIS) AFA_17500 IPR036390 Winged helix DNA-binding domain superfamily AFA_17500 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17500 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AFA_17500 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AFA_17500 IPR011008 Dimeric alpha-beta barrel AFA_17500 IPR000485 AsnC-type HTH domain AFA_17500 IPR011991 ArsR-like helix-turn-helix domain AFA_17500 IPR019888 Transcription regulator AsnC-type AFA_17515 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AFA_17515 IPR011004 Trimeric LpxA-like superfamily AFA_17515 IPR025877 MobA-like NTP transferase AFA_17515 IPR018357 Hexapeptide transferase, conserved site AFA_17515 IPR001451 Hexapeptide repeat AFA_17515 IPR038009 GlmU, C-terminal LbH domain AFA_17515 IPR029044 Nucleotide-diphospho-sugar transferases AFA_17530 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AFA_17530 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain AFA_17530 IPR014222 Cytochrome c oxidase, subunit II AFA_17530 IPR001505 Copper centre Cu(A) AFA_17530 IPR008972 Cupredoxin AFA_17530 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily AFA_17535 IPR023616 Cytochrome c oxidase-like, subunit I domain AFA_17535 IPR014241 Cytochrome c oxidase, subunit I bacterial type AFA_17535 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AFA_17535 IPR033944 Cytochrome c oxidase subunit I domain AFA_17535 IPR000883 Cytochrome c oxidase subunit I AFA_17535 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AFA_17545 IPR033945 Cytochrome c oxidase subunit III domain AFA_17545 IPR035973 Cytochrome c oxidase subunit III-like superfamily AFA_17545 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AFA_17545 IPR024791 Cytochrome c oxidase subunit III AFA_17545 IPR000298 Cytochrome c oxidase subunit III-like AFA_17565 IPR003780 COX15/CtaA family AFA_17565 IPR023755 Heme A synthase, type 1 AFA_17570 IPR006369 Protohaem IX farnesyltransferase AFA_17570 IPR000537 UbiA prenyltransferase family AFA_17570 IPR030470 UbiA prenyltransferase conserved site AFA_17575 IPR001789 Signal transduction response regulator, receiver domain AFA_17575 IPR018060 DNA binding HTH domain, AraC-type AFA_17575 IPR009057 Homeobox-like domain superfamily AFA_17575 IPR011006 CheY-like superfamily AFA_17595 IPR000531 TonB-dependent receptor-like, beta-barrel AFA_17595 IPR010917 TonB-dependent receptor, conserved site AFA_17595 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AFA_17595 IPR010105 TonB-dependent siderophore receptor AFA_17595 IPR037066 TonB-dependent receptor, plug domain superfamily AFA_17595 IPR012910 TonB-dependent receptor, plug domain AFA_17595 IPR039426 Vitamin B12 transporter BtuB-like AFA_17600 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17600 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria AFA_17600 IPR013324 RNA polymerase sigma factor, region 3/4-like AFA_17600 IPR014284 RNA polymerase sigma-70 like domain AFA_17600 IPR000943 RNA polymerase sigma-70 AFA_17600 IPR013325 RNA polymerase sigma factor, region 2 AFA_17600 IPR007630 RNA polymerase sigma-70 region 4 AFA_17600 IPR007627 RNA polymerase sigma-70 region 2 AFA_17600 IPR009042 RNA polymerase sigma-70 region 1.2 AFA_17605 IPR014186 S-formylglutathione hydrolase AFA_17605 IPR000801 Putative esterase AFA_17605 IPR029058 Alpha/Beta hydrolase fold AFA_17610 IPR013149 Alcohol dehydrogenase, C-terminal AFA_17610 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AFA_17610 IPR036291 NAD(P)-binding domain superfamily AFA_17610 IPR011032 GroES-like superfamily AFA_17610 IPR013154 Alcohol dehydrogenase, N-terminal AFA_17610 IPR014183 Alcohol dehydrogenase class III AFA_17615 IPR001736 Phospholipase D/Transphosphatidylase AFA_17615 IPR025202 Phospholipase D-like domain AFA_17615 IPR030872 Cardiolipin synthase B AFA_17620 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AFA_17620 IPR005135 Endonuclease/exonuclease/phosphatase AFA_17625 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AFA_17625 IPR004524 Aspartate-tRNA ligase, type 1 AFA_17625 IPR006195 Aminoacyl-tRNA synthetase, class II AFA_17625 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AFA_17625 IPR029351 GAD domain AFA_17625 IPR004115 GAD-like domain superfamily AFA_17625 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AFA_17625 IPR012340 Nucleic acid-binding, OB-fold AFA_17645 IPR006370 4-hydroxybenzoate polyprenyltransferase-like AFA_17645 IPR039653 Prenyltransferase AFA_17645 IPR000537 UbiA prenyltransferase family AFA_17645 IPR030470 UbiA prenyltransferase conserved site AFA_17650 IPR015424 Pyridoxal phosphate-dependent transferase AFA_17650 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_17650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_17650 IPR004839 Aminotransferase, class I/classII AFA_17660 IPR011059 Metal-dependent hydrolase, composite domain superfamily AFA_17660 IPR032466 Metal-dependent hydrolase AFA_17660 IPR005920 Imidazolonepropionase AFA_17660 IPR006680 Amidohydrolase-related AFA_17670 IPR001525 C-5 cytosine methyltransferase AFA_17670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_17670 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AFA_17670 IPR001387 Cro/C1-type helix-turn-helix domain AFA_17670 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site AFA_17670 IPR018117 DNA methylase, C-5 cytosine-specific, active site AFA_17680 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AFA_17680 IPR001106 Aromatic amino acid lyase AFA_17680 IPR024083 Fumarase/histidase, N-terminal AFA_17680 IPR008948 L-Aspartase-like AFA_17680 IPR005921 Histidine ammonia-lyase AFA_17685 IPR023637 Urocanase AFA_17685 IPR035401 Urocanase, C-terminal domain AFA_17685 IPR038364 Urocanase, central domain superfamily AFA_17685 IPR023636 Urocanase conserved site AFA_17685 IPR035400 Urocanase, N-terminal domain AFA_17685 IPR036190 Urocanase superfamily AFA_17685 IPR035085 Urocanase, Rossmann-like domain AFA_17690 IPR010248 Histidine utilization repressor AFA_17690 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17690 IPR011663 UbiC transcription regulator-associated AFA_17690 IPR000524 Transcription regulator HTH, GntR AFA_17690 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AFA_17690 IPR036390 Winged helix DNA-binding domain superfamily AFA_17710 IPR011789 Cu(I)-responsive transcriptional regulator AFA_17710 IPR009061 Putative DNA-binding domain superfamily AFA_17710 IPR000551 MerR-type HTH domain AFA_17715 IPR036259 MFS transporter superfamily AFA_17715 IPR011701 Major facilitator superfamily AFA_17715 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AFA_17715 IPR020846 Major facilitator superfamily domain AFA_17730 IPR010987 Glutathione S-transferase, C-terminal-like AFA_17730 IPR036249 Thioredoxin-like superfamily AFA_17730 IPR004046 Glutathione S-transferase, C-terminal AFA_17730 IPR004045 Glutathione S-transferase, N-terminal AFA_17730 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AFA_17735 IPR000847 Transcription regulator HTH, LysR AFA_17735 IPR005119 LysR, substrate-binding AFA_17735 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17735 IPR036390 Winged helix DNA-binding domain superfamily AFA_17740 IPR017938 Riboflavin synthase-like beta-barrel AFA_17740 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_17740 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_17740 IPR023950 Flavohemoprotein AFA_17740 IPR012292 Globin/Protoglobin AFA_17740 IPR009050 Globin-like superfamily AFA_17740 IPR000971 Globin AFA_17740 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_17740 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_17740 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_17745 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AFA_17745 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AFA_17745 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AFA_17750 IPR000847 Transcription regulator HTH, LysR AFA_17750 IPR036390 Winged helix DNA-binding domain superfamily AFA_17750 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 AFA_17750 IPR005119 LysR, substrate-binding AFA_17750 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17755 IPR004839 Aminotransferase, class I/classII AFA_17755 IPR000796 Aspartate/other aminotransferase AFA_17755 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AFA_17755 IPR015424 Pyridoxal phosphate-dependent transferase AFA_17755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_17755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_17760 IPR016130 Protein-tyrosine phosphatase, active site AFA_17760 IPR000387 Tyrosine specific protein phosphatases domain AFA_17760 IPR029021 Protein-tyrosine phosphatase-like AFA_17760 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AFA_17765 IPR001279 Metallo-beta-lactamase AFA_17765 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AFA_17765 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AFA_17765 IPR022712 Beta-Casp domain AFA_17785 IPR003462 Ornithine cyclodeaminase/mu-crystallin AFA_17785 IPR023401 Ornithine cyclodeaminase, N-terminal AFA_17785 IPR036291 NAD(P)-binding domain superfamily AFA_17790 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_17790 IPR017938 Riboflavin synthase-like beta-barrel AFA_17790 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_17790 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_17790 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_17790 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_17790 IPR012675 Beta-grasp domain superfamily AFA_17790 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_17790 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F AFA_17790 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_17810 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AFA_17810 IPR017938 Riboflavin synthase-like beta-barrel AFA_17810 IPR036010 2Fe-2S ferredoxin-like superfamily AFA_17810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AFA_17810 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_17810 IPR012675 Beta-grasp domain superfamily AFA_17810 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AFA_17810 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_17810 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_17815 IPR038084 GlcG-like domain superfamily AFA_17815 IPR005624 Haem-degrading AFA_17820 IPR016161 Aldehyde/histidinol dehydrogenase AFA_17820 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_17820 IPR016160 Aldehyde dehydrogenase, cysteine active site AFA_17820 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_17820 IPR015590 Aldehyde dehydrogenase domain AFA_17820 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AFA_17830 IPR029055 Nucleophile aminohydrolases, N-terminal AFA_17845 IPR000524 Transcription regulator HTH, GntR AFA_17845 IPR011711 GntR, C-terminal AFA_17845 IPR008920 Transcription regulator FadR/GntR, C-terminal AFA_17845 IPR000485 AsnC-type HTH domain AFA_17845 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_17845 IPR036390 Winged helix DNA-binding domain superfamily AFA_17850 IPR023764 Transcriptional repressor HTH, FabR AFA_17850 IPR009057 Homeobox-like domain superfamily AFA_17850 IPR001647 DNA-binding HTH domain, TetR-type AFA_17855 IPR011701 Major facilitator superfamily AFA_17855 IPR036259 MFS transporter superfamily AFA_17855 IPR004734 Multidrug resistance protein AFA_17855 IPR020846 Major facilitator superfamily domain AFA_17855 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AFA_17860 IPR012347 Ferritin-like AFA_17860 IPR008331 Ferritin/DPS protein domain AFA_17860 IPR009078 Ferritin-like superfamily AFA_17860 IPR002024 Bacterioferritin AFA_17860 IPR009040 Ferritin-like diiron domain AFA_17870 IPR020846 Major facilitator superfamily domain AFA_17870 IPR036259 MFS transporter superfamily AFA_17870 IPR011701 Major facilitator superfamily AFA_17875 IPR011344 Single-stranded DNA-binding protein AFA_17875 IPR000424 Primosome PriB/single-strand DNA-binding AFA_17875 IPR012340 Nucleic acid-binding, OB-fold AFA_17880 IPR011701 Major facilitator superfamily AFA_17880 IPR020846 Major facilitator superfamily domain AFA_17880 IPR036259 MFS transporter superfamily AFA_17885 IPR041102 UvrA, interaction domain AFA_17885 IPR041552 UvrA DNA-binding domain AFA_17885 IPR004602 UvrABC system subunit A AFA_17885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_17885 IPR017871 ABC transporter, conserved site AFA_17885 IPR003439 ABC transporter-like AFA_17890 IPR006674 HD domain AFA_17890 IPR006261 dNTP triphosphohydrolase AFA_17890 IPR023023 dNTP triphosphohydrolase, type 2 AFA_17890 IPR026875 Phosphohydrolase-associated domain AFA_17890 IPR003607 HD/PDEase domain AFA_17895 IPR030960 3-dehydroquinate synthase domain AFA_17895 IPR030963 3-dehydroquinate synthase family AFA_17895 IPR016037 3-dehydroquinate synthase AroB AFA_17900 IPR023000 Shikimate kinase, conserved site AFA_17900 IPR031322 Shikimate kinase/gluconokinase AFA_17900 IPR000623 Shikimate kinase/Threonine synthase-like 1 AFA_17900 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_17905 IPR001460 Penicillin-binding protein, transpeptidase AFA_17905 IPR031376 Penicillin-binding protein, OB-like domain AFA_17905 IPR023346 Lysozyme-like domain superfamily AFA_17905 IPR036950 Penicillin binding protein transglycosylase domain AFA_17905 IPR001264 Glycosyl transferase, family 51 AFA_17905 IPR012338 Beta-lactamase/transpeptidase-like AFA_17915 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AFA_17915 IPR000183 Ornithine/DAP/Arg decarboxylase AFA_17915 IPR029066 PLP-binding barrel AFA_17915 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AFA_17915 IPR002986 Diaminopimelate decarboxylase, LysA AFA_17915 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AFA_17915 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AFA_17920 IPR035965 PAS domain superfamily AFA_17920 IPR013656 PAS fold-4 AFA_17920 IPR000160 GGDEF domain AFA_17920 IPR029787 Nucleotide cyclase AFA_17920 IPR035919 EAL domain superfamily AFA_17920 IPR001633 EAL domain AFA_17920 IPR000014 PAS domain AFA_17930 IPR007816 ResB-like domain AFA_17930 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB AFA_17935 IPR008168 Cytochrome c, class IC AFA_17935 IPR009056 Cytochrome c-like domain AFA_17935 IPR024167 Cytochrome c4-like AFA_17935 IPR036909 Cytochrome c-like domain superfamily AFA_17940 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_17940 IPR006073 GTP binding domain AFA_17940 IPR030393 EngB-type guanine nucleotide-binding (G) domain AFA_17940 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AFA_17945 IPR001731 Delta-aminolevulinic acid dehydratase AFA_17945 IPR030656 Delta-aminolevulinic acid dehydratase, active site AFA_17945 IPR013785 Aldolase-type TIM barrel AFA_17950 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AFA_17950 IPR035671 DsbD gamma AFA_17950 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AFA_17950 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AFA_17950 IPR022910 Thiol:disulphide interchange protein DsbD AFA_17950 IPR036249 Thioredoxin-like superfamily AFA_17950 IPR017937 Thioredoxin, conserved site AFA_17950 IPR013766 Thioredoxin domain AFA_17955 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AFA_17955 IPR011322 Nitrogen regulatory PII-like, alpha/beta AFA_17955 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria AFA_17955 IPR004323 Divalent ion tolerance protein, CutA AFA_17960 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AFA_17960 IPR009057 Homeobox-like domain superfamily AFA_17960 IPR018060 DNA binding HTH domain, AraC-type AFA_17960 IPR018062 HTH domain AraC-type, conserved site AFA_17970 IPR036661 Luciferase-like domain superfamily AFA_17970 IPR019914 Pyrimidine monooxygenase RutA AFA_17970 IPR011251 Luciferase-like domain AFA_17975 IPR036373 Ribosomal protein L17 superfamily AFA_17975 IPR000456 Ribosomal protein L17 AFA_17980 IPR036643 DNA-directed RNA polymerase, insert domain superfamily AFA_17980 IPR011260 RNA polymerase, alpha subunit, C-terminal AFA_17980 IPR036603 RNA polymerase, RBP11-like subunit AFA_17980 IPR011773 DNA-directed RNA polymerase, alpha subunit AFA_17980 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AFA_17980 IPR011262 DNA-directed RNA polymerase, insert domain AFA_17985 IPR018079 Ribosomal protein S4, conserved site AFA_17985 IPR036986 RNA-binding S4 domain superfamily AFA_17985 IPR002942 RNA-binding S4 domain AFA_17985 IPR005709 Ribosomal protein S4, bacterial-type AFA_17985 IPR022801 Ribosomal protein S4/S9 AFA_17985 IPR001912 Ribosomal protein S4/S9, N-terminal AFA_17990 IPR019981 Ribosomal protein S11, bacterial-type AFA_17990 IPR001971 Ribosomal protein S11 AFA_17990 IPR018102 Ribosomal S11, conserved site AFA_17990 IPR036967 Ribosomal protein S11 superfamily AFA_17995 IPR018269 Ribosomal protein S13, conserved site AFA_17995 IPR001892 Ribosomal protein S13 AFA_17995 IPR027437 30s ribosomal protein S13, C-terminal AFA_17995 IPR019980 Ribosomal protein S13, bacterial-type AFA_17995 IPR010979 Ribosomal protein S13-like, H2TH AFA_18000 IPR035977 Ribosomal protein L36 superfamily AFA_18000 IPR000473 Ribosomal protein L36 AFA_18005 IPR004368 Translation initiation factor IF-1 AFA_18005 IPR012340 Nucleic acid-binding, OB-fold AFA_18005 IPR022967 RNA-binding domain, S1 AFA_18005 IPR006196 RNA-binding domain, S1, IF1 type AFA_18010 IPR026593 Protein translocase subunit SecY AFA_18010 IPR002208 SecY/SEC61-alpha family AFA_18010 IPR023201 SecY domain superfamily AFA_18010 IPR030659 SecY conserved site AFA_18015 IPR030878 Ribosomal protein L15 AFA_18015 IPR021131 Ribosomal protein L18e/L15P AFA_18015 IPR036227 Ribosomal L18e/L15P superfamily AFA_18015 IPR005749 Ribosomal protein L15, bacterial-type AFA_18020 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AFA_18020 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AFA_18020 IPR005996 Ribosomal protein L30, bacterial-type AFA_18020 IPR018038 Ribosomal protein L30, conserved site AFA_18025 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_18025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_18025 IPR013810 Ribosomal protein S5, N-terminal AFA_18025 IPR018192 Ribosomal protein S5, N-terminal, conserved site AFA_18025 IPR005712 Ribosomal protein S5, bacterial-type AFA_18025 IPR000851 Ribosomal protein S5 AFA_18025 IPR005324 Ribosomal protein S5, C-terminal AFA_18030 IPR005484 Ribosomal protein L18 AFA_18030 IPR004389 Ribosomal protein L18, bacterial-type AFA_18035 IPR000702 Ribosomal protein L6 AFA_18035 IPR020040 Ribosomal protein L6, alpha-beta domain AFA_18035 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily AFA_18035 IPR019906 Ribosomal protein L6, bacterial-type AFA_18035 IPR002358 Ribosomal protein L6, conserved site AFA_18040 IPR035987 Ribosomal protein S8 superfamily AFA_18040 IPR000630 Ribosomal protein S8 AFA_18045 IPR023036 Ribosomal protein S14, bacterial/plastid AFA_18045 IPR001209 Ribosomal protein S14 AFA_18050 IPR020930 Ribosomal protein L5, bacterial-type AFA_18050 IPR031309 Ribosomal protein L5, C-terminal AFA_18050 IPR020929 Ribosomal protein L5, conserved site AFA_18050 IPR022803 Ribosomal protein L5 domain superfamily AFA_18050 IPR002132 Ribosomal protein L5 AFA_18050 IPR031310 Ribosomal protein L5, N-terminal AFA_18055 IPR041988 Ribosomal Protein L26/L24, KOW domain AFA_18055 IPR003256 Ribosomal protein L24 AFA_18055 IPR005825 Ribosomal protein L24/L26, conserved site AFA_18055 IPR008991 Translation protein SH3-like domain superfamily AFA_18055 IPR014722 Ribosomal protein L2, domain 2 AFA_18060 IPR036853 Ribosomal protein L14 superfamily AFA_18060 IPR005745 Ribosomal protein L14P, bacterial-type AFA_18060 IPR019972 Ribosomal protein L14P, conserved site AFA_18060 IPR000218 Ribosomal protein L14P AFA_18085 IPR010129 Type I secretion membrane fusion protein, HlyD family AFA_18085 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AFA_18090 IPR039421 Type I protein exporter AFA_18090 IPR039395 Peptidase C39-like A AFA_18090 IPR003593 AAA+ ATPase domain AFA_18090 IPR005074 Peptidase C39, bacteriocin processing AFA_18090 IPR036640 ABC transporter type 1, transmembrane domain superfamily AFA_18090 IPR011527 ABC transporter type 1, transmembrane domain AFA_18090 IPR017871 ABC transporter, conserved site AFA_18090 IPR010132 ATPase, type I secretion system, HlyB AFA_18090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18090 IPR003439 ABC transporter-like AFA_18100 IPR010130 Type I secretion outer membrane protein, TolC AFA_18100 IPR003423 Outer membrane efflux protein AFA_18105 IPR008640 Head domain of trimeric autotransporter adhesin AFA_18105 IPR008635 Coiled stalk of trimeric autotransporter adhesin AFA_18105 IPR024973 ESPR domain AFA_18105 IPR011049 Serralysin-like metalloprotease, C-terminal AFA_18105 IPR005594 YadA-like, C-terminal AFA_18110 IPR017850 Alkaline-phosphatase-like, core domain superfamily AFA_18110 IPR017767 Bacterial phospholipase C, phosphocholine-specific AFA_18110 IPR007312 Phosphoesterase AFA_18110 IPR008475 Bacterial phospholipase C, C-terminal domain AFA_18110 IPR006311 Twin-arginine translocation pathway, signal sequence AFA_18120 IPR035906 MetI-like superfamily AFA_18120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_18125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18125 IPR012693 ABC transporter, phosphonate import, PhnC AFA_18125 IPR003593 AAA+ ATPase domain AFA_18125 IPR017871 ABC transporter, conserved site AFA_18125 IPR003439 ABC transporter-like AFA_18135 IPR023214 HAD superfamily AFA_18135 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 AFA_18135 IPR006357 HAD-superfamily hydrolase, subfamily IIA AFA_18135 IPR036412 HAD-like superfamily AFA_18140 IPR001347 Sugar isomerase (SIS) AFA_18140 IPR035472 RpiR-like, SIS domain AFA_18140 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_18140 IPR009057 Homeobox-like domain superfamily AFA_18140 IPR000281 Helix-turn-helix protein RpiR AFA_18145 IPR016163 Aldehyde dehydrogenase, C-terminal AFA_18145 IPR016161 Aldehyde/histidinol dehydrogenase AFA_18145 IPR016162 Aldehyde dehydrogenase, N-terminal AFA_18145 IPR015590 Aldehyde dehydrogenase domain AFA_18155 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_18155 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type AFA_18155 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_18155 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_18155 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_18155 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_18155 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_18160 IPR002155 Thiolase AFA_18160 IPR020615 Thiolase, acyl-enzyme intermediate active site AFA_18160 IPR020610 Thiolase, active site AFA_18160 IPR020613 Thiolase, conserved site AFA_18160 IPR020617 Thiolase, C-terminal AFA_18160 IPR016039 Thiolase-like AFA_18160 IPR012793 Beta-ketoadipyl CoA thiolase AFA_18160 IPR020616 Thiolase, N-terminal AFA_18165 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AFA_18165 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AFA_18165 IPR001753 Enoyl-CoA hydratase/isomerase AFA_18165 IPR012802 Fatty oxidation complex, alpha subunit FadJ AFA_18165 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AFA_18165 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AFA_18165 IPR029045 ClpP/crotonase-like domain superfamily AFA_18165 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AFA_18165 IPR036291 NAD(P)-binding domain superfamily AFA_18170 IPR042117 OMPP1/FadL/TodX superfamily AFA_18170 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AFA_18185 IPR042099 AMP-dependent synthetase-like superfamily AFA_18185 IPR000873 AMP-dependent synthetase/ligase AFA_18185 IPR020845 AMP-binding, conserved site AFA_18185 IPR025110 AMP-binding enzyme, C-terminal domain AFA_18190 IPR017938 Riboflavin synthase-like beta-barrel AFA_18190 IPR001433 Oxidoreductase FAD/NAD(P)-binding AFA_18190 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AFA_18190 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AFA_18190 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AFA_18190 IPR017927 FAD-binding domain, ferredoxin reductase-type AFA_18190 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AFA_18190 IPR029039 Flavoprotein-like superfamily AFA_18190 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AFA_18190 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AFA_18190 IPR008254 Flavodoxin/nitric oxide synthase AFA_18190 IPR001094 Flavodoxin-like AFA_18195 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AFA_18195 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AFA_18195 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AFA_18195 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit AFA_18195 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AFA_18200 IPR006367 Sirohaem synthase, N-terminal AFA_18200 IPR035996 Tetrapyrrole methylase superfamily AFA_18200 IPR019478 Sirohaem synthase, dimerisation domain AFA_18200 IPR028281 Siroheme synthase, central domain AFA_18200 IPR012409 Sirohaem synthase AFA_18200 IPR036291 NAD(P)-binding domain superfamily AFA_18200 IPR006366 Uroporphyrin-III C-methyltransferase AFA_18200 IPR014776 Tetrapyrrole methylase, subdomain 2 AFA_18200 IPR014777 Tetrapyrrole methylase, subdomain 1 AFA_18200 IPR000878 Tetrapyrrole methylase AFA_18200 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AFA_18205 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_18205 IPR035906 MetI-like superfamily AFA_18205 IPR005889 Nitrate transport permease AFA_18215 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18215 IPR003593 AAA+ ATPase domain AFA_18215 IPR003439 ABC transporter-like AFA_18215 IPR017871 ABC transporter, conserved site AFA_18215 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AFA_18220 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AFA_18220 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AFA_18220 IPR006089 Acyl-CoA dehydrogenase, conserved site AFA_18220 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AFA_18220 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AFA_18220 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AFA_18220 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AFA_18230 IPR018062 HTH domain AraC-type, conserved site AFA_18230 IPR018060 DNA binding HTH domain, AraC-type AFA_18230 IPR032783 AraC-type transcription regulator, ligand-binding domain AFA_18230 IPR009057 Homeobox-like domain superfamily AFA_18235 IPR019979 Ribosomal protein S17, conserved site AFA_18235 IPR000266 Ribosomal protein S17/S11 AFA_18235 IPR019984 30S ribosomal protein S17 AFA_18235 IPR012340 Nucleic acid-binding, OB-fold AFA_18240 IPR018254 Ribosomal protein L29, conserved site AFA_18240 IPR036049 Ribosomal protein L29/L35 superfamily AFA_18240 IPR001854 Ribosomal protein L29/L35 AFA_18245 IPR036920 Ribosomal protein L10e/L16 superfamily AFA_18245 IPR016180 Ribosomal protein L10e/L16 AFA_18245 IPR000114 Ribosomal protein L16 AFA_18245 IPR020798 Ribosomal protein L16, conserved site AFA_18250 IPR018280 Ribosomal protein S3, conserved site AFA_18250 IPR004044 K Homology domain, type 2 AFA_18250 IPR005704 Ribosomal protein S3, bacterial-type AFA_18250 IPR001351 Ribosomal protein S3, C-terminal AFA_18250 IPR015946 K homology domain-like, alpha/beta AFA_18250 IPR004087 K Homology domain AFA_18250 IPR009019 K homology domain superfamily, prokaryotic type AFA_18250 IPR036419 Ribosomal protein S3, C-terminal domain superfamily AFA_18255 IPR018260 Ribosomal protein L22/L17, conserved site AFA_18255 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AFA_18255 IPR001063 Ribosomal protein L22/L17 AFA_18255 IPR036394 Ribosomal protein L22/L17 superfamily AFA_18260 IPR005732 Ribosomal protein S19, bacterial-type AFA_18260 IPR023575 Ribosomal protein S19, superfamily AFA_18260 IPR002222 Ribosomal protein S19/S15 AFA_18260 IPR020934 Ribosomal protein S19 conserved site AFA_18265 IPR012340 Nucleic acid-binding, OB-fold AFA_18265 IPR014722 Ribosomal protein L2, domain 2 AFA_18265 IPR002171 Ribosomal protein L2 AFA_18265 IPR005880 Ribosomal protein L2, bacterial/organellar-type AFA_18265 IPR022669 Ribosomal protein L2, C-terminal AFA_18265 IPR014726 Ribosomal protein L2, domain 3 AFA_18265 IPR008991 Translation protein SH3-like domain superfamily AFA_18265 IPR022666 Ribosomal Proteins L2, RNA binding domain AFA_18265 IPR022671 Ribosomal protein L2, conserved site AFA_18270 IPR013025 Ribosomal protein L25/L23 AFA_18270 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AFA_18270 IPR012678 Ribosomal protein L23/L15e core domain superfamily AFA_18275 IPR013005 50S ribosomal protein uL4 AFA_18275 IPR023574 Ribosomal protein L4 domain superfamily AFA_18275 IPR002136 Ribosomal protein L4/L1e AFA_18280 IPR019926 Ribosomal protein L3, conserved site AFA_18280 IPR000597 Ribosomal protein L3 AFA_18280 IPR009000 Translation protein, beta-barrel domain superfamily AFA_18280 IPR019927 Ribosomal protein L3, bacterial/organelle-type AFA_18285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18285 IPR003593 AAA+ ATPase domain AFA_18285 IPR005892 Glycine betaine transport ATP-binding subunit AFA_18285 IPR000644 CBS domain AFA_18285 IPR017871 ABC transporter, conserved site AFA_18285 IPR003439 ABC transporter-like AFA_18290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AFA_18290 IPR035906 MetI-like superfamily AFA_18295 IPR036838 Ribosomal protein S10 domain superfamily AFA_18295 IPR018268 Ribosomal protein S10, conserved site AFA_18295 IPR027486 Ribosomal protein S10 domain AFA_18295 IPR001848 Ribosomal protein S10 AFA_18300 IPR004161 Translation elongation factor EFTu-like, domain 2 AFA_18300 IPR033720 Elongation factor Tu, domain 2 AFA_18300 IPR031157 Tr-type G domain, conserved site AFA_18300 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18300 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AFA_18300 IPR000795 Transcription factor, GTP-binding domain AFA_18300 IPR009000 Translation protein, beta-barrel domain superfamily AFA_18300 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AFA_18300 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AFA_18300 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AFA_18300 IPR005225 Small GTP-binding protein domain AFA_18305 IPR005517 Translation elongation factor EFG/EF2, domain IV AFA_18305 IPR004540 Translation elongation factor EFG/EF2 AFA_18305 IPR009000 Translation protein, beta-barrel domain superfamily AFA_18305 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18305 IPR041095 Elongation Factor G, domain II AFA_18305 IPR000795 Transcription factor, GTP-binding domain AFA_18305 IPR009022 Elongation factor G, domain III AFA_18305 IPR005225 Small GTP-binding protein domain AFA_18305 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_18305 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_18305 IPR035647 EF-G domain III/V-like AFA_18305 IPR035649 EFG, domain V AFA_18305 IPR000640 Elongation factor EFG, domain V-like AFA_18305 IPR004161 Translation elongation factor EFTu-like, domain 2 AFA_18305 IPR031157 Tr-type G domain, conserved site AFA_18310 IPR023798 Ribosomal protein S7 domain AFA_18310 IPR020606 Ribosomal protein S7, conserved site AFA_18310 IPR036823 Ribosomal protein S7 domain superfamily AFA_18310 IPR005717 Ribosomal protein S7, bacterial/organellar-type AFA_18310 IPR000235 Ribosomal protein S5/S7 AFA_18315 IPR005679 Ribosomal protein S12, bacterial-type AFA_18315 IPR006032 Ribosomal protein S12/S23 AFA_18315 IPR012340 Nucleic acid-binding, OB-fold AFA_18320 IPR036388 Winged helix-like DNA-binding domain superfamily AFA_18320 IPR001867 OmpR/PhoB-type DNA-binding domain AFA_18320 IPR011006 CheY-like superfamily AFA_18320 IPR016032 Signal transduction response regulator, C-terminal effector AFA_18320 IPR001789 Signal transduction response regulator, receiver domain AFA_18320 IPR039420 Transcriptional regulatory protein WalR-like AFA_18330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AFA_18330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AFA_18330 IPR003594 Histidine kinase/HSP90-like ATPase AFA_18330 IPR003660 HAMP domain AFA_18330 IPR006290 Heavy metal sensor kinase AFA_18330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AFA_18330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AFA_18330 IPR005467 Histidine kinase domain AFA_18345 IPR008972 Cupredoxin AFA_18345 IPR028871 Blue (type 1) copper protein, binding site AFA_18345 IPR000923 Blue (type 1) copper domain AFA_18345 IPR014068 Azurin AFA_18350 IPR007081 RNA polymerase Rpb1, domain 5 AFA_18350 IPR007083 RNA polymerase Rpb1, domain 4 AFA_18350 IPR042102 RNA polymerase Rpb1, domain 3 superfamily AFA_18350 IPR007066 RNA polymerase Rpb1, domain 3 AFA_18350 IPR007080 RNA polymerase Rpb1, domain 1 AFA_18350 IPR006592 RNA polymerase, N-terminal AFA_18350 IPR000722 RNA polymerase, alpha subunit AFA_18350 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AFA_18350 IPR038120 RNA polymerase Rpb1, funnel domain superfamily AFA_18355 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AFA_18355 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AFA_18355 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AFA_18355 IPR015712 DNA-directed RNA polymerase, subunit 2 AFA_18355 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AFA_18355 IPR007645 RNA polymerase Rpb2, domain 3 AFA_18355 IPR007641 RNA polymerase Rpb2, domain 7 AFA_18355 IPR014724 RNA polymerase Rpb2, OB-fold AFA_18355 IPR007644 RNA polymerase, beta subunit, protrusion AFA_18355 IPR007121 RNA polymerase, beta subunit, conserved site AFA_18355 IPR007642 RNA polymerase Rpb2, domain 2 AFA_18355 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AFA_18360 IPR008932 Ribosomal protein L7/L12, oligomerisation AFA_18360 IPR000206 Ribosomal protein L7/L12 AFA_18360 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AFA_18360 IPR013823 Ribosomal protein L7/L12, C-terminal AFA_18360 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily AFA_18365 IPR001790 Ribosomal protein L10P AFA_18365 IPR002363 Ribosomal protein L10, eubacterial, conserved site AFA_18365 IPR022973 Ribosomal protein L10 AFA_18370 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AFA_18370 IPR023673 Ribosomal protein L1, conserved site AFA_18370 IPR005878 Ribosomal protein L1, bacterial-type AFA_18370 IPR002143 Ribosomal protein L1 AFA_18370 IPR023674 Ribosomal protein L1-like AFA_18370 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AFA_18375 IPR020783 Ribosomal protein L11, C-terminal AFA_18375 IPR020785 Ribosomal protein L11, conserved site AFA_18375 IPR020784 Ribosomal protein L11, N-terminal AFA_18375 IPR000911 Ribosomal protein L11/L12 AFA_18375 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AFA_18375 IPR006519 Ribosomal protein L11, bacterial-type AFA_18375 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AFA_18380 IPR008991 Translation protein SH3-like domain superfamily AFA_18380 IPR036735 NusG, N-terminal domain superfamily AFA_18380 IPR001062 Transcription antitermination protein, NusG AFA_18380 IPR014722 Ribosomal protein L2, domain 2 AFA_18380 IPR006645 NusG, N-terminal AFA_18380 IPR005824 KOW AFA_18380 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AFA_18395 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AFA_18395 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AFA_18395 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AFA_18395 IPR009000 Translation protein, beta-barrel domain superfamily AFA_18395 IPR000795 Transcription factor, GTP-binding domain AFA_18395 IPR005225 Small GTP-binding protein domain AFA_18395 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18395 IPR031157 Tr-type G domain, conserved site AFA_18395 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AFA_18395 IPR033720 Elongation factor Tu, domain 2 AFA_18395 IPR004161 Translation elongation factor EFTu-like, domain 2 AFA_18415 IPR036086 ParB/Sulfiredoxin superfamily AFA_18415 IPR004437 ParB/RepB/Spo0J partition protein AFA_18415 IPR041468 ParB/Spo0J, HTH domain AFA_18415 IPR003115 ParB/Sulfiredoxin AFA_18420 IPR025669 AAA domain AFA_18420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AFA_18425 IPR003682 rRNA small subunit methyltransferase G AFA_18430 IPR026904 GidA associated domain 3 AFA_18430 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_18430 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related AFA_18430 IPR020595 MnmG-related, conserved site AFA_18430 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG AFA_18435 IPR004839 Aminotransferase, class I/classII AFA_18435 IPR015424 Pyridoxal phosphate-dependent transferase AFA_18435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AFA_18435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AFA_18440 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AFA_18440 IPR029052 Metallo-dependent phosphatase-like AFA_18440 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE AFA_18440 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase AFA_18440 IPR041780 PrpE-like, metallophosphatase domain AFA_18445 IPR012292 Globin/Protoglobin AFA_18445 IPR009050 Globin-like superfamily AFA_18445 IPR000160 GGDEF domain AFA_18445 IPR039435 Diguanylate cyclase DosC, globin sensor domain AFA_18445 IPR029787 Nucleotide cyclase AFA_18450 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 AFA_18450 IPR003817 Phosphatidylserine decarboxylase-related AFA_18450 IPR033177 Phosphatidylserine decarboxylase AFA_18460 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_18460 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_18460 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AFA_18460 IPR002912 ACT domain AFA_18460 IPR005789 Threonine dehydratase, catabolic AFA_18470 IPR003719 Phenazine biosynthesis PhzF protein AFA_18505 IPR018948 GTP-binding protein TrmE, N-terminal AFA_18505 IPR004520 tRNA modification GTPase MnmE AFA_18505 IPR031168 TrmE-type guanine nucleotide-binding domain AFA_18505 IPR005225 Small GTP-binding protein domain AFA_18505 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18505 IPR025867 MnmE, helical domain AFA_18505 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AFA_18505 IPR006073 GTP binding domain AFA_18505 IPR027368 tRNA modification GTPase MnmE domain 2 AFA_18510 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AFA_18510 IPR013096 Cupin 2, conserved barrel AFA_18510 IPR014710 RmlC-like jelly roll fold AFA_18510 IPR011051 RmlC-like cupin domain superfamily AFA_18510 IPR001387 Cro/C1-type helix-turn-helix domain AFA_18515 IPR010169 Acetylornithine deacetylase ArgE AFA_18515 IPR036264 Bacterial exopeptidase dimerisation domain AFA_18515 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AFA_18515 IPR002933 Peptidase M20 AFA_18515 IPR011650 Peptidase M20, dimerisation domain AFA_18520 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AFA_18520 IPR001926 Pyridoxal-phosphate dependent enzyme AFA_18525 IPR003462 Ornithine cyclodeaminase/mu-crystallin AFA_18525 IPR023401 Ornithine cyclodeaminase, N-terminal AFA_18525 IPR036291 NAD(P)-binding domain superfamily AFA_18535 IPR028081 Leucine-binding protein domain AFA_18535 IPR000709 Leu/Ile/Val-binding protein AFA_18535 IPR028082 Periplasmic binding protein-like I AFA_18540 IPR001851 ABC transporter, permease AFA_18550 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AFA_18550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18550 IPR017871 ABC transporter, conserved site AFA_18550 IPR003439 ABC transporter-like AFA_18550 IPR003593 AAA+ ATPase domain AFA_18555 IPR027417 P-loop containing nucleoside triphosphate hydrolase AFA_18555 IPR003593 AAA+ ATPase domain AFA_18555 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AFA_18555 IPR017871 ABC transporter, conserved site AFA_18555 IPR003439 ABC transporter-like AFA_18560 IPR029058 Alpha/Beta hydrolase fold AFA_18560 IPR000073 Alpha/beta hydrolase fold-1 AFA_18570 IPR000868 Isochorismatase-like AFA_18570 IPR036380 Isochorismatase-like superfamily AFA_18575 IPR036188 FAD/NAD(P)-binding domain superfamily AFA_18575 IPR002938 FAD-binding domain AFA_18595 IPR040333 Catalase, clade 3 AFA_18595 IPR018028 Catalase, mono-functional, haem-containing AFA_18595 IPR002226 Catalase haem-binding site AFA_18595 IPR020835 Catalase superfamily AFA_18595 IPR024708 Catalase active site AFA_18595 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 AFA_18595 IPR011614 Catalase core domain AFA_18595 IPR037060 Catalase core domain superfamily AFA_18595 IPR010582 Catalase immune-responsive domain AFA_18600 IPR019998 Membrane insertase YidC AFA_18600 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 AFA_18600 IPR038210 Membrane insertase YidC, periplasmic domain AFA_18600 IPR038221 YidC, periplasmic domain superfamily AFA_18600 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AFA_18600 IPR028053 Membrane insertase YidC, N-terminal AFA_18605 IPR002696 Putative membrane protein insertion efficiency factor AFA_18610 IPR020539 Ribonuclease P, conserved site AFA_18610 IPR020568 Ribosomal protein S5 domain 2-type fold AFA_18610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AFA_18610 IPR000100 Ribonuclease P AFA_18615 IPR020939 Ribosomal protein L34, conserved site AFA_18615 IPR000271 Ribosomal protein L34