locus-tag class description M2J83_00005 PF00308 Bacterial dnaA protein M2J83_00005 PF08299 Bacterial dnaA protein helix-turn-helix M2J83_00005 PF11638 DnaA N-terminal domain M2J83_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M2J83_00010 PF02767 DNA polymerase III beta subunit, central domain M2J83_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M2J83_00015 PF00204 DNA gyrase B M2J83_00015 PF00986 DNA gyrase B subunit, carboxyl terminus M2J83_00015 PF18053 DNA gyrase B subunit insert domain M2J83_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_00015 PF01751 Toprim domain M2J83_00020 PF01479 S4 domain M2J83_00020 PF00849 RNA pseudouridylate synthase M2J83_00035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00065 PF13609 Gram-negative porin M2J83_00070 PF00701 Dihydrodipicolinate synthetase family M2J83_00085 PF01266 FAD dependent oxidoreductase M2J83_00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_00095 PF04324 BFD-like [2Fe-2S] binding domain M2J83_00100 PF00378 Enoyl-CoA hydratase/isomerase M2J83_00105 PF03060 Nitronate monooxygenase M2J83_00110 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_00115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_00115 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_00115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_00125 PF02515 CoA-transferase family III M2J83_00135 PF02515 CoA-transferase family III M2J83_00140 PF07729 FCD domain M2J83_00140 PF00392 Bacterial regulatory proteins, gntR family M2J83_00145 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00155 PF00175 Oxidoreductase NAD-binding domain M2J83_00155 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_00160 PF00355 Rieske [2Fe-2S] domain M2J83_00165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M2J83_00165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M2J83_00170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_00170 PF03466 LysR substrate binding domain M2J83_00180 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_00190 PF02653 Branched-chain amino acid transport system / permease component M2J83_00195 PF02653 Branched-chain amino acid transport system / permease component M2J83_00195 PF11862 Domain of unknown function (DUF3382) M2J83_00200 PF00005 ABC transporter M2J83_00205 PF13193 AMP-binding enzyme C-terminal domain M2J83_00205 PF00501 AMP-binding enzyme M2J83_00215 PF00561 alpha/beta hydrolase fold M2J83_00215 PF00364 Biotin-requiring enzyme M2J83_00220 PF00155 Aminotransferase class I and II M2J83_00220 PF00392 Bacterial regulatory proteins, gntR family M2J83_00225 PF00378 Enoyl-CoA hydratase/isomerase M2J83_00230 PF17645 Arylmalonate decarboxylase M2J83_00235 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_00245 PF00892 EamA-like transporter family M2J83_00250 PF03466 LysR substrate binding domain M2J83_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_00260 PF08402 TOBE domain M2J83_00260 PF00005 ABC transporter M2J83_00270 PF00155 Aminotransferase class I and II M2J83_00280 PF07683 Cobalamin synthesis protein cobW C-terminal domain M2J83_00280 PF02492 CobW/HypB/UreG, nucleotide-binding domain M2J83_00285 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_00310 PF16347 Domain of unknown function (DUF4976) M2J83_00310 PF00884 Sulfatase M2J83_00320 PF01047 MarR family M2J83_00335 PF12802 MarR family M2J83_00345 PF01494 FAD binding domain M2J83_00350 PF07883 Cupin domain M2J83_00355 PF01557 Fumarylacetoacetate (FAA) hydrolase family M2J83_00360 PF00795 Carbon-nitrogen hydrolase M2J83_00365 PF04199 Putative cyclase M2J83_00370 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_00370 PF00175 Oxidoreductase NAD-binding domain M2J83_00370 PF00970 Oxidoreductase FAD-binding domain M2J83_00375 PF00355 Rieske [2Fe-2S] domain M2J83_00375 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M2J83_00380 PF00866 Ring hydroxylating beta subunit M2J83_00385 PF00501 AMP-binding enzyme M2J83_00385 PF13193 AMP-binding enzyme C-terminal domain M2J83_00410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00440 PF01613 Flavin reductase like domain M2J83_00450 PF12833 Helix-turn-helix domain M2J83_00460 PF00005 ABC transporter M2J83_00470 PF02261 Aspartate decarboxylase M2J83_00475 PF00593 TonB dependent receptor M2J83_00475 PF07715 TonB-dependent Receptor Plug Domain M2J83_00485 PF08281 Sigma-70, region 4 M2J83_00485 PF04542 Sigma-70 region 2 M2J83_00490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2J83_00490 PF00005 ABC transporter M2J83_00495 PF00005 ABC transporter M2J83_00495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2J83_00500 PF12911 N-terminal TM domain of oligopeptide transport permease C M2J83_00500 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_00505 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_00510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2J83_00515 PF00817 impB/mucB/samB family M2J83_00515 PF11799 impB/mucB/samB family C-terminal domain M2J83_00525 PF00202 Aminotransferase class-III M2J83_00530 PF00296 Luciferase-like monooxygenase M2J83_00535 PF03358 NADPH-dependent FMN reductase M2J83_00550 PF14525 AraC-binding-like domain M2J83_00550 PF12833 Helix-turn-helix domain M2J83_00560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_00560 PF03466 LysR substrate binding domain M2J83_00565 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M2J83_00565 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M2J83_00570 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_00585 PF01274 Malate synthase M2J83_00590 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus M2J83_00590 PF01048 Phosphorylase superfamily M2J83_00600 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_00605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2J83_00620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2J83_00620 PF00205 Thiamine pyrophosphate enzyme, central domain M2J83_00625 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_00635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00645 PF01131 DNA topoisomerase M2J83_00645 PF01751 Toprim domain M2J83_00655 PF04361 Protein of unknown function (DUF494) M2J83_00660 PF00749 tRNA synthetases class I (E and Q), catalytic domain M2J83_00665 PF00364 Biotin-requiring enzyme M2J83_00665 PF02785 Biotin carboxylase C-terminal domain M2J83_00665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2J83_00665 PF00289 Biotin carboxylase, N-terminal domain M2J83_00670 PF01039 Carboxyl transferase domain M2J83_00675 PF00108 Thiolase, N-terminal domain M2J83_00675 PF02803 Thiolase, C-terminal domain M2J83_00680 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M2J83_00685 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_00685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_00685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_00690 PF09278 MerR, DNA binding M2J83_00690 PF00376 MerR family regulatory protein M2J83_00700 PF01053 Cys/Met metabolism PLP-dependent enzyme M2J83_00705 PF01323 DSBA-like thioredoxin domain M2J83_00705 PF00085 Thioredoxin M2J83_00715 PF00750 tRNA synthetases class I (R) M2J83_00715 PF05746 DALR anticodon binding domain M2J83_00715 PF03485 Arginyl tRNA synthetase N terminal domain M2J83_00735 PF08502 LeuA allosteric (dimerisation) domain M2J83_00735 PF00682 HMGL-like M2J83_00750 PF04963 Sigma-54 factor, core binding domain M2J83_00750 PF04552 Sigma-54, DNA binding domain M2J83_00750 PF00309 Sigma-54 factor, Activator interacting domain (AID) M2J83_00755 PF00593 TonB dependent receptor M2J83_00755 PF07715 TonB-dependent Receptor Plug Domain M2J83_00760 PF00694 Aconitase C-terminal domain M2J83_00765 PF00330 Aconitase family (aconitate hydratase) M2J83_00770 PF00682 HMGL-like M2J83_00775 PF02515 CoA-transferase family III M2J83_00780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00780 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M2J83_00790 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_00795 PF00857 Isochorismatase family M2J83_00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_00800 PF03466 LysR substrate binding domain M2J83_00810 PF00210 Ferritin-like domain M2J83_00820 PF03144 Elongation factor Tu domain 2 M2J83_00820 PF00009 Elongation factor Tu GTP binding domain M2J83_00820 PF16658 Class II release factor RF3, C-terminal domain M2J83_00825 PF01810 LysE type translocator M2J83_00830 PF00270 DEAD/DEAH box helicase M2J83_00830 PF00271 Helicase conserved C-terminal domain M2J83_00840 PF04536 TPM domain M2J83_00855 PF01926 50S ribosome-binding GTPase M2J83_00855 PF12631 MnmE helical domain M2J83_00855 PF10396 GTP-binding protein TrmE N-terminus M2J83_00870 PF01425 Amidase M2J83_00875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_00875 PF03466 LysR substrate binding domain M2J83_00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_00885 PF03466 LysR substrate binding domain M2J83_00905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00915 PF02405 Permease MlaE M2J83_00920 PF00005 ABC transporter M2J83_00925 PF03886 ABC-type transport auxiliary lipoprotein component M2J83_00925 PF02470 MlaD protein M2J83_00940 PF13419 Haloacid dehalogenase-like hydrolase M2J83_00945 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_00955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_00970 PF13193 AMP-binding enzyme C-terminal domain M2J83_00970 PF00501 AMP-binding enzyme M2J83_00975 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_00980 PF07729 FCD domain M2J83_00980 PF00392 Bacterial regulatory proteins, gntR family M2J83_00985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_00985 PF03466 LysR substrate binding domain M2J83_00990 PF01266 FAD dependent oxidoreductase M2J83_01000 PF02646 RmuC family M2J83_01010 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system M2J83_01015 PF03707 Bacterial signalling protein N terminal repeat M2J83_01015 PF00990 Diguanylate cyclase, GGDEF domain M2J83_01015 PF00563 EAL domain M2J83_01020 PF00708 Acylphosphatase M2J83_01030 PF16868 NMT1-like family M2J83_01040 PF00849 RNA pseudouridylate synthase M2J83_01045 PF00710 Asparaginase, N-terminal M2J83_01045 PF17763 Glutaminase/Asparaginase C-terminal domain M2J83_01050 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_01055 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_01060 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_01065 PF00005 ABC transporter M2J83_01070 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M2J83_01070 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M2J83_01075 PF01168 Alanine racemase, N-terminal domain M2J83_01080 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_01090 PF00501 AMP-binding enzyme M2J83_01095 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2J83_01095 PF00005 ABC transporter M2J83_01100 PF02653 Branched-chain amino acid transport system / permease component M2J83_01115 PF00005 ABC transporter M2J83_01125 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_01135 PF00682 HMGL-like M2J83_01140 PF02481 DNA recombination-mediator protein A M2J83_01140 PF17782 DprA winged helix domain M2J83_01145 PF01327 Polypeptide deformylase M2J83_01150 PF02911 Formyl transferase, C-terminal domain M2J83_01150 PF00551 Formyl transferase M2J83_01155 PF00892 EamA-like transporter family M2J83_01160 PF01425 Amidase M2J83_01170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_01185 PF07286 Protein of unknown function (DUF1445) M2J83_01190 PF03466 LysR substrate binding domain M2J83_01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_01195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M2J83_01200 PF00534 Glycosyl transferases group 1 M2J83_01200 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M2J83_01205 PF00313 'Cold-shock' DNA-binding domain M2J83_01210 PF00483 Nucleotidyl transferase M2J83_01215 PF03309 Type III pantothenate kinase M2J83_01220 PF02237 Biotin protein ligase C terminal domain M2J83_01220 PF03099 Biotin/lipoate A/B protein ligase family M2J83_01230 PF00768 D-alanyl-D-alanine carboxypeptidase M2J83_01230 PF07943 Penicillin-binding protein 5, C-terminal domain M2J83_01235 PF01063 Amino-transferase class IV M2J83_01240 PF04359 Protein of unknown function (DUF493) M2J83_01245 PF03099 Biotin/lipoate A/B protein ligase family M2J83_01260 PF07715 TonB-dependent Receptor Plug Domain M2J83_01260 PF00593 TonB dependent receptor M2J83_01260 PF07660 Secretin and TonB N terminus short domain M2J83_01265 PF00378 Enoyl-CoA hydratase/isomerase M2J83_01270 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M2J83_01270 PF04055 Radical SAM superfamily M2J83_01280 PF03167 Uracil DNA glycosylase superfamily M2J83_01325 PF01136 Peptidase family U32 M2J83_01335 PF02036 SCP-2 sterol transfer family M2J83_01360 PF00218 Indole-3-glycerol phosphate synthase M2J83_01365 PF00591 Glycosyl transferase family, a/b domain M2J83_01365 PF02885 Glycosyl transferase family, helical bundle domain M2J83_01370 PF00117 Glutamine amidotransferase class-I M2J83_01375 PF00425 chorismate binding enzyme M2J83_01375 PF04715 Anthranilate synthase component I, N terminal region M2J83_01380 PF13419 Haloacid dehalogenase-like hydrolase M2J83_01390 PF00834 Ribulose-phosphate 3 epimerase family M2J83_01395 PF04379 ApaG domain M2J83_01400 PF03562 MltA specific insert domain M2J83_01400 PF06725 3D domain M2J83_01405 PF01494 FAD binding domain M2J83_01410 PF10411 Disulfide bond isomerase protein N-terminus M2J83_01410 PF13098 Thioredoxin-like domain M2J83_01420 PF00672 HAMP domain M2J83_01420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_01420 PF17200 Single Cache domain 2 M2J83_01430 PF00106 short chain dehydrogenase M2J83_01435 PF00550 Phosphopantetheine attachment site M2J83_01435 PF00857 Isochorismatase family M2J83_01440 PF00425 chorismate binding enzyme M2J83_01450 PF05977 Transmembrane secretion effector M2J83_01455 PF00501 AMP-binding enzyme M2J83_01455 PF00668 Condensation domain M2J83_01455 PF00550 Phosphopantetheine attachment site M2J83_01455 PF00975 Thioesterase domain M2J83_01460 PF00857 Isochorismatase family M2J83_01460 PF00550 Phosphopantetheine attachment site M2J83_01465 PF00501 AMP-binding enzyme M2J83_01465 PF13193 AMP-binding enzyme C-terminal domain M2J83_01475 PF00005 ABC transporter M2J83_01480 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2J83_01480 PF00005 ABC transporter M2J83_01495 PF13458 Periplasmic binding protein M2J83_01510 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_01515 PF00005 ABC transporter M2J83_01525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M2J83_01525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M2J83_01545 PF00005 ABC transporter M2J83_01550 PF01032 FecCD transport family M2J83_01555 PF00756 Putative esterase M2J83_01560 PF00270 DEAD/DEAH box helicase M2J83_01560 PF00271 Helicase conserved C-terminal domain M2J83_01565 PF07690 Major Facilitator Superfamily M2J83_01575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_01575 PF03466 LysR substrate binding domain M2J83_01585 PF03741 Integral membrane protein TerC family M2J83_01585 PF03471 Transporter associated domain M2J83_01595 PF02678 Pirin M2J83_01595 PF05726 Pirin C-terminal cupin domain M2J83_01610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M2J83_01610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M2J83_01620 PF01063 Amino-transferase class IV M2J83_01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_01625 PF03466 LysR substrate binding domain M2J83_01630 PF04235 Protein of unknown function (DUF418) M2J83_01640 PF04229 GrpB protein M2J83_01645 PF13673 Acetyltransferase (GNAT) domain M2J83_01650 PF01636 Phosphotransferase enzyme family M2J83_01670 PF01613 Flavin reductase like domain M2J83_01675 PF01546 Peptidase family M20/M25/M40 M2J83_01680 PF01979 Amidohydrolase family M2J83_01685 PF01979 Amidohydrolase family M2J83_01690 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_01695 PF00005 ABC transporter M2J83_01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_01705 PF03466 LysR substrate binding domain M2J83_01710 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_01715 PF00005 ABC transporter M2J83_01720 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_01725 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_01730 PF00701 Dihydrodipicolinate synthetase family M2J83_01735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M2J83_01735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M2J83_01740 PF00171 Aldehyde dehydrogenase family M2J83_01750 PF06433 Methylamine dehydrogenase heavy chain (MADH) M2J83_01760 PF00578 AhpC/TSA family M2J83_01765 PF02975 Methylamine dehydrogenase, L chain M2J83_01775 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M2J83_01775 PF12833 Helix-turn-helix domain M2J83_01785 PF01208 Uroporphyrinogen decarboxylase (URO-D) M2J83_01790 PF00270 DEAD/DEAH box helicase M2J83_01790 PF00271 Helicase conserved C-terminal domain M2J83_01790 PF17764 3′ DNA-binding domain (3′BD) M2J83_01790 PF18074 Primosomal protein N C-terminal domain M2J83_01790 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M2J83_01795 PF00580 UvrD/REP helicase N-terminal domain M2J83_01795 PF13361 UvrD-like helicase C-terminal domain M2J83_01805 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_01805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M2J83_01810 PF04898 Glutamate synthase central domain M2J83_01810 PF01645 Conserved region in glutamate synthase M2J83_01810 PF01493 GXGXG motif M2J83_01810 PF00310 Glutamine amidotransferases class-II M2J83_01815 PF00378 Enoyl-CoA hydratase/isomerase M2J83_01825 PF02515 CoA-transferase family III M2J83_01830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M2J83_01830 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain M2J83_01830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M2J83_01840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_01855 PF07715 TonB-dependent Receptor Plug Domain M2J83_01855 PF00593 TonB dependent receptor M2J83_01860 PF04262 Glutamate-cysteine ligase M2J83_01875 PF00561 alpha/beta hydrolase fold M2J83_01885 PF07690 Major Facilitator Superfamily M2J83_01890 PF03458 UPF0126 domain M2J83_01895 PF04172 LrgB-like family M2J83_01905 PF01042 Endoribonuclease L-PSP M2J83_01910 PF01042 Endoribonuclease L-PSP M2J83_01925 PF13018 Extended Signal Peptide of Type V secretion system M2J83_01925 PF03895 YadA-like membrane anchor domain M2J83_01925 PF05658 Head domain of trimeric autotransporter adhesin M2J83_01925 PF05662 Coiled stalk of trimeric autotransporter adhesin M2J83_01945 PF01810 LysE type translocator M2J83_01965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_01965 PF03466 LysR substrate binding domain M2J83_01975 PF00202 Aminotransferase class-III M2J83_01990 PF01923 Cobalamin adenosyltransferase M2J83_02005 PF07724 AAA domain (Cdc48 subfamily) M2J83_02005 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_02010 PF00227 Proteasome subunit M2J83_02015 PF01258 Prokaryotic dksA/traR C4-type zinc finger M2J83_02020 PF07683 Cobalamin synthesis protein cobW C-terminal domain M2J83_02020 PF02492 CobW/HypB/UreG, nucleotide-binding domain M2J83_02025 PF01475 Ferric uptake regulator family M2J83_02035 PF00005 ABC transporter M2J83_02040 PF00950 ABC 3 transport family M2J83_02045 PF01297 Zinc-uptake complex component A periplasmic M2J83_02050 PF02899 Phage integrase, N-terminal SAM-like domain M2J83_02050 PF00589 Phage integrase family M2J83_02060 PF01678 Diaminopimelate epimerase M2J83_02065 PF03279 Bacterial lipid A biosynthesis acyltransferase M2J83_02075 PF02772 S-adenosylmethionine synthetase, central domain M2J83_02075 PF02773 S-adenosylmethionine synthetase, C-terminal domain M2J83_02075 PF00438 S-adenosylmethionine synthetase, N-terminal domain M2J83_02080 PF05221 S-adenosyl-L-homocysteine hydrolase M2J83_02080 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M2J83_02085 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M2J83_02090 PF02219 Methylenetetrahydrofolate reductase M2J83_02100 PF14718 Soluble lytic murein transglycosylase L domain M2J83_02100 PF01464 Transglycosylase SLT domain M2J83_02105 PF12627 Probable RNA and SrmB- binding site of polymerase A M2J83_02105 PF01743 Poly A polymerase head domain M2J83_02120 PF01795 MraW methylase family M2J83_02125 PF01925 Sulfite exporter TauE/SafE M2J83_02130 PF00311 Phosphoenolpyruvate carboxylase M2J83_02135 PF00920 Dehydratase family M2J83_02140 PF02540 NAD synthase M2J83_02150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_02150 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_02150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_02155 PF02515 CoA-transferase family III M2J83_02160 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_02170 PF01594 AI-2E family transporter M2J83_02200 PF03743 Bacterial conjugation TrbI-like protein M2J83_02205 PF03524 Conjugal transfer protein M2J83_02215 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M2J83_02225 PF03135 CagE, TrbE, VirB family, component of type IV transporter system M2J83_02235 PF04956 TrbC/VIRB2 family M2J83_02240 PF00437 Type II/IV secretion system protein M2J83_02250 PF02534 Type IV secretory system Conjugative DNA transfer M2J83_02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_02260 PF03466 LysR substrate binding domain M2J83_02270 PF02525 Flavodoxin-like fold M2J83_02275 PF01022 Bacterial regulatory protein, arsR family M2J83_02290 PF10502 Signal peptidase, peptidase S26 M2J83_02305 PF13614 AAA domain M2J83_02335 PF05284 Protein of unknown function (DUF736) M2J83_02345 PF02195 ParB-like nuclease domain M2J83_02350 PF06067 Domain of unknown function (DUF932) M2J83_02355 PF03230 Antirestriction protein M2J83_02360 PF04002 RadC-like JAB domain M2J83_02370 PF01734 Patatin-like phospholipase M2J83_02430 PF13609 Gram-negative porin M2J83_02435 PF00171 Aldehyde dehydrogenase family M2J83_02450 PF14525 AraC-binding-like domain M2J83_02450 PF12833 Helix-turn-helix domain M2J83_02455 PF00440 Bacterial regulatory proteins, tetR family M2J83_02455 PF08361 MAATS-type transcriptional repressor, C-terminal region M2J83_02470 PF13193 AMP-binding enzyme C-terminal domain M2J83_02470 PF00501 AMP-binding enzyme M2J83_02480 PF01494 FAD binding domain M2J83_02485 PF07690 Major Facilitator Superfamily M2J83_02495 PF16347 Domain of unknown function (DUF4976) M2J83_02495 PF00884 Sulfatase M2J83_02505 PF01047 MarR family M2J83_02510 PF02321 Outer membrane efflux protein M2J83_02515 PF00873 AcrB/AcrD/AcrF family M2J83_02520 PF00529 HlyD membrane-fusion protein of T1SS M2J83_02520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_02525 PF00175 Oxidoreductase NAD-binding domain M2J83_02525 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_02525 PF00970 Oxidoreductase FAD-binding domain M2J83_02530 PF09278 MerR, DNA binding M2J83_02530 PF00376 MerR family regulatory protein M2J83_02540 PF00593 TonB dependent receptor M2J83_02540 PF07715 TonB-dependent Receptor Plug Domain M2J83_02545 PF01497 Periplasmic binding protein M2J83_02550 PF00005 ABC transporter M2J83_02555 PF01032 FecCD transport family M2J83_02560 PF01032 FecCD transport family M2J83_02565 PF00005 ABC transporter M2J83_02570 PF00005 ABC transporter M2J83_02570 PF00664 ABC transporter transmembrane region M2J83_02570 PF08021 Siderophore-interacting FAD-binding domain M2J83_02570 PF04954 Siderophore-interacting protein M2J83_02575 PF01565 FAD binding domain M2J83_02575 PF09330 D-lactate dehydrogenase, membrane binding M2J83_02580 PF01070 FMN-dependent dehydrogenase M2J83_02585 PF07729 FCD domain M2J83_02585 PF00392 Bacterial regulatory proteins, gntR family M2J83_02590 PF02652 L-lactate permease M2J83_02605 PF00392 Bacterial regulatory proteins, gntR family M2J83_02605 PF07702 UTRA domain M2J83_02610 PF01037 Lrp/AsnC ligand binding domain M2J83_02615 PF00266 Aminotransferase class-V M2J83_02620 PF00324 Amino acid permease M2J83_02635 PF00578 AhpC/TSA family M2J83_02640 PF01970 Tripartite tricarboxylate transporter TctA family M2J83_02650 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_02655 PF08220 DeoR-like helix-turn-helix domain M2J83_02655 PF00455 DeoR C terminal sensor domain M2J83_02660 PF08402 TOBE domain M2J83_02660 PF00005 ABC transporter M2J83_02665 PF13416 Bacterial extracellular solute-binding protein M2J83_02670 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_02675 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_02685 PF07715 TonB-dependent Receptor Plug Domain M2J83_02685 PF07660 Secretin and TonB N terminus short domain M2J83_02685 PF00593 TonB dependent receptor M2J83_02700 PF03741 Integral membrane protein TerC family M2J83_02705 PF05698 Bacterial trigger factor protein (TF) C-terminus M2J83_02715 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M2J83_02725 PF01966 HD domain M2J83_02730 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_02735 PF13378 Enolase C-terminal domain-like M2J83_02735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M2J83_02740 PF01479 S4 domain M2J83_02745 PF07690 Major Facilitator Superfamily M2J83_02750 PF00440 Bacterial regulatory proteins, tetR family M2J83_02760 PF01425 Amidase M2J83_02765 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_02770 PF03466 LysR substrate binding domain M2J83_02785 PF08803 Putative mono-oxygenase ydhR M2J83_02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_02795 PF00183 Hsp90 protein M2J83_02800 PF07715 TonB-dependent Receptor Plug Domain M2J83_02800 PF00593 TonB dependent receptor M2J83_02805 PF13640 2OG-Fe(II) oxygenase superfamily M2J83_02805 PF18331 PKHD-type hydroxylase C-terminal domain M2J83_02810 PF01070 FMN-dependent dehydrogenase M2J83_02815 PF01510 N-acetylmuramoyl-L-alanine amidase M2J83_02830 PF00448 SRP54-type protein, GTPase domain M2J83_02830 PF02881 SRP54-type protein, helical bundle domain M2J83_02830 PF02978 Signal peptide binding domain M2J83_02835 PF04972 BON domain M2J83_02835 PF01476 LysM domain M2J83_02840 PF02597 ThiS family M2J83_02840 PF05690 Thiazole biosynthesis protein ThiG M2J83_02845 PF00561 alpha/beta hydrolase fold M2J83_02850 PF02390 Putative methyltransferase M2J83_02860 PF13356 Arm DNA-binding domain M2J83_02860 PF14659 Phage integrase, N-terminal SAM-like domain M2J83_02860 PF00589 Phage integrase family M2J83_02875 PF13614 AAA domain M2J83_02910 PF00436 Single-strand binding protein family M2J83_02915 PF01751 Toprim domain M2J83_02915 PF01131 DNA topoisomerase M2J83_02955 PF06067 Domain of unknown function (DUF932) M2J83_03110 PF04002 RadC-like JAB domain M2J83_03145 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system M2J83_03200 PF01580 FtsK/SpoIIIE family M2J83_03200 PF12538 DNA transporter M2J83_03235 PF00893 Small Multidrug Resistance protein M2J83_03240 PF00809 Pterin binding enzyme M2J83_03260 PF00398 Ribosomal RNA adenine dimethylase M2J83_03265 PF00005 ABC transporter M2J83_03265 PF17912 MalK OB fold domain M2J83_03270 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M2J83_03275 PF01636 Phosphotransferase enzyme family M2J83_03280 PF02796 Helix-turn-helix domain of resolvase M2J83_03280 PF00239 Resolvase, N terminal domain M2J83_03290 PF00990 Diguanylate cyclase, GGDEF domain M2J83_03290 PF03707 Bacterial signalling protein N terminal repeat M2J83_03290 PF00563 EAL domain M2J83_03295 PF05052 MerE protein M2J83_03300 PF13411 MerR HTH family regulatory protein M2J83_03305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2J83_03305 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_03305 PF00403 Heavy-metal-associated domain M2J83_03310 PF00403 Heavy-metal-associated domain M2J83_03315 PF02411 MerT mercuric transport protein M2J83_03320 PF00376 MerR family regulatory protein M2J83_03320 PF09278 MerR, DNA binding M2J83_03330 PF00005 ABC transporter M2J83_03335 PF04851 Type III restriction enzyme, res subunit M2J83_03335 PF08774 VRR-NUC domain M2J83_03340 PF01555 DNA methylase M2J83_03340 PF18273 Type III R-M EcoP15I C-terminal domain M2J83_03355 PF00271 Helicase conserved C-terminal domain M2J83_03355 PF00176 SNF2 family N-terminal domain M2J83_03365 PF03466 LysR substrate binding domain M2J83_03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_03375 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_03405 PF00550 Phosphopantetheine attachment site M2J83_03405 PF00857 Isochorismatase family M2J83_03410 PF12833 Helix-turn-helix domain M2J83_03410 PF14525 AraC-binding-like domain M2J83_03430 PF03466 LysR substrate binding domain M2J83_03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_03435 PF01699 Sodium/calcium exchanger protein M2J83_03440 PF00990 Diguanylate cyclase, GGDEF domain M2J83_03440 PF00072 Response regulator receiver domain M2J83_03445 PF01323 DSBA-like thioredoxin domain M2J83_03450 PF07690 Major Facilitator Superfamily M2J83_03450 PF00083 Sugar (and other) transporter M2J83_03455 PF00596 Class II Aldolase and Adducin N-terminal domain M2J83_03475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2J83_03480 PF07883 Cupin domain M2J83_03480 PF05899 Protein of unknown function (DUF861) M2J83_03485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_03485 PF03466 LysR substrate binding domain M2J83_03490 PF01545 Cation efflux family M2J83_03490 PF16916 Dimerisation domain of Zinc Transporter M2J83_03495 PF09334 tRNA synthetases class I (M) M2J83_03495 PF01588 Putative tRNA binding domain M2J83_03505 PF10609 NUBPL iron-transfer P-loop NTPase M2J83_03520 PF00692 dUTPase M2J83_03525 PF01276 Orn/Lys/Arg decarboxylase, major domain M2J83_03525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M2J83_03525 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M2J83_03535 PF01597 Glycine cleavage H-protein M2J83_03540 PF00186 Dihydrofolate reductase M2J83_03545 PF00303 Thymidylate synthase M2J83_03550 PF02566 OsmC-like protein M2J83_03555 PF00115 Cytochrome C and Quinol oxidase polypeptide I M2J83_03580 PF03232 Ubiquinone biosynthesis protein COQ7 M2J83_03585 PF00224 Pyruvate kinase, barrel domain M2J83_03585 PF02887 Pyruvate kinase, alpha/beta domain M2J83_03590 PF03928 Haem-degrading M2J83_03595 PF13660 Domain of unknown function (DUF4147) M2J83_03595 PF05161 MOFRL family M2J83_03600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2J83_03600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2J83_03605 PF01261 Xylose isomerase-like TIM barrel M2J83_03610 PF00205 Thiamine pyrophosphate enzyme, central domain M2J83_03610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2J83_03610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2J83_03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_03615 PF03466 LysR substrate binding domain M2J83_03625 PF00860 Permease family M2J83_03630 PF01361 Tautomerase enzyme M2J83_03635 PF00596 Class II Aldolase and Adducin N-terminal domain M2J83_03640 PF04115 Ureidoglycolate lyase M2J83_03645 PF09349 OHCU decarboxylase M2J83_03645 PF01014 Uricase M2J83_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_03650 PF03466 LysR substrate binding domain M2J83_03655 PF00953 Glycosyl transferase family 4 M2J83_03660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M2J83_03660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M2J83_03660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M2J83_03665 PF01370 NAD dependent epimerase/dehydratase family M2J83_03675 PF00534 Glycosyl transferases group 1 M2J83_03675 PF13439 Glycosyltransferase Family 4 M2J83_03680 PF13439 Glycosyltransferase Family 4 M2J83_03680 PF00534 Glycosyl transferases group 1 M2J83_03685 PF00534 Glycosyl transferases group 1 M2J83_03685 PF13477 Glycosyl transferase 4-like M2J83_03690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2J83_03690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2J83_03690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2J83_03690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2J83_03695 PF01565 FAD binding domain M2J83_03695 PF02913 FAD linked oxidases, C-terminal domain M2J83_03705 PF01557 Fumarylacetoacetate (FAA) hydrolase family M2J83_03710 PF04209 homogentisate 1,2-dioxygenase M2J83_03720 PF01494 FAD binding domain M2J83_03730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M2J83_03730 PF06827 Zinc finger found in FPG and IleRS M2J83_03730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M2J83_03740 PF03550 Outer membrane lipoprotein LolB M2J83_03745 PF08544 GHMP kinases C terminal M2J83_03745 PF00288 GHMP kinases N terminal domain M2J83_03755 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M2J83_03755 PF14572 Phosphoribosyl synthetase-associated domain M2J83_03760 PF01386 Ribosomal L25p family M2J83_03760 PF14693 Ribosomal protein TL5, C-terminal domain M2J83_03765 PF01195 Peptidyl-tRNA hydrolase M2J83_03775 PF01926 50S ribosome-binding GTPase M2J83_03775 PF06071 Protein of unknown function (DUF933) M2J83_03780 PF03783 Curli production assembly/transport component CsgG M2J83_03790 PF05643 Putative bacterial lipoprotein (DUF799) M2J83_03800 PF00892 EamA-like transporter family M2J83_03805 PF01909 Nucleotidyltransferase domain M2J83_03805 PF13427 Domain of unknown function (DUF4111) M2J83_03810 PF12848 ABC transporter M2J83_03810 PF16326 ABC transporter C-terminal domain M2J83_03810 PF00005 ABC transporter M2J83_03825 PF03797 Autotransporter beta-domain M2J83_03825 PF00657 GDSL-like Lipase/Acylhydrolase M2J83_03830 PF00484 Carbonic anhydrase M2J83_03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_03835 PF03466 LysR substrate binding domain M2J83_03845 PF00005 ABC transporter M2J83_03850 PF03379 CcmB protein M2J83_03855 PF01578 Cytochrome C assembly protein M2J83_03865 PF03100 CcmE M2J83_03870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M2J83_03870 PF01578 Cytochrome C assembly protein M2J83_03875 PF08534 Redoxin M2J83_03880 PF03918 Cytochrome C biogenesis protein M2J83_03890 PF02683 Cytochrome C biogenesis protein transmembrane region M2J83_03900 PF02805 Metal binding domain of Ada M2J83_03900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M2J83_03900 PF12833 Helix-turn-helix domain M2J83_03900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M2J83_03920 PF02653 Branched-chain amino acid transport system / permease component M2J83_03925 PF02653 Branched-chain amino acid transport system / permease component M2J83_03925 PF11862 Domain of unknown function (DUF3382) M2J83_03930 PF00005 ABC transporter M2J83_03930 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2J83_03935 PF00005 ABC transporter M2J83_03940 PF03150 Di-haem cytochrome c peroxidase M2J83_03940 PF00034 Cytochrome c M2J83_03945 PF01842 ACT domain M2J83_03945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2J83_03945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2J83_03950 PF02082 Transcriptional regulator M2J83_03955 PF01152 Bacterial-like globin M2J83_03960 PF00535 Glycosyl transferase family 2 M2J83_03990 PF00582 Universal stress protein family M2J83_04000 PF02634 FdhD/NarQ family M2J83_04005 PF12838 4Fe-4S dicluster domain M2J83_04005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M2J83_04005 PF01568 Molydopterin dinucleotide binding domain M2J83_04005 PF00384 Molybdopterin oxidoreductase M2J83_04005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M2J83_04010 PF00037 4Fe-4S binding domain M2J83_04010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M2J83_04010 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M2J83_04020 PF12727 PBP superfamily domain M2J83_04020 PF12728 Helix-turn-helix domain M2J83_04025 PF06463 Molybdenum Cofactor Synthesis C M2J83_04025 PF04055 Radical SAM superfamily M2J83_04030 PF12804 MobA-like NTP transferase domain M2J83_04035 PF00994 Probable molybdopterin binding domain M2J83_04035 PF03454 MoeA C-terminal region (domain IV) M2J83_04035 PF03453 MoeA N-terminal region (domain I and II) M2J83_04040 PF00994 Probable molybdopterin binding domain M2J83_04045 PF02391 MoaE protein M2J83_04055 PF01967 MoaC family M2J83_04060 PF00196 Bacterial regulatory proteins, luxR family M2J83_04060 PF00072 Response regulator receiver domain M2J83_04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_04065 PF00512 His Kinase A (phospho-acceptor) domain M2J83_04065 PF00989 PAS fold M2J83_04070 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_04075 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M2J83_04080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_04085 PF08534 Redoxin M2J83_04105 PF06968 Biotin and Thiamin Synthesis associated domain M2J83_04105 PF04055 Radical SAM superfamily M2J83_04120 PF00873 AcrB/AcrD/AcrF family M2J83_04125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_04135 PF00196 Bacterial regulatory proteins, luxR family M2J83_04140 PF07690 Major Facilitator Superfamily M2J83_04175 PF00563 EAL domain M2J83_04175 PF00990 Diguanylate cyclase, GGDEF domain M2J83_04175 PF03707 Bacterial signalling protein N terminal repeat M2J83_04180 PF00795 Carbon-nitrogen hydrolase M2J83_04185 PF03471 Transporter associated domain M2J83_04185 PF00571 CBS domain M2J83_04190 PF02130 Uncharacterized protein family UPF0054 M2J83_04195 PF02562 PhoH-like protein M2J83_04200 PF00919 Uncharacterized protein family UPF0004 M2J83_04200 PF01938 TRAM domain M2J83_04200 PF04055 Radical SAM superfamily M2J83_04210 PF00557 Metallopeptidase family M24 M2J83_04215 PF02355 Protein export membrane protein M2J83_04215 PF07549 SecD/SecF GG Motif M2J83_04220 PF07549 SecD/SecF GG Motif M2J83_04220 PF13721 SecD export protein N-terminal TM region M2J83_04220 PF02355 Protein export membrane protein M2J83_04225 PF02699 Preprotein translocase subunit M2J83_04230 PF01702 Queuine tRNA-ribosyltransferase M2J83_04235 PF02547 Queuosine biosynthesis protein M2J83_04240 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M2J83_04255 PF05957 Bacterial protein of unknown function (DUF883) M2J83_04270 PF03466 LysR substrate binding domain M2J83_04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_04280 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_04280 PF00970 Oxidoreductase FAD-binding domain M2J83_04285 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M2J83_04300 PF01425 Amidase M2J83_04310 PF00083 Sugar (and other) transporter M2J83_04310 PF08946 Osmosensory transporter coiled coil M2J83_04315 PF03466 LysR substrate binding domain M2J83_04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_04320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2J83_04325 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M2J83_04330 PF01464 Transglycosylase SLT domain M2J83_04335 PF00155 Aminotransferase class I and II M2J83_04345 PF01515 Phosphate acetyl/butaryl transferase M2J83_04345 PF00390 Malic enzyme, N-terminal domain M2J83_04345 PF03949 Malic enzyme, NAD binding domain M2J83_04355 PF01337 Barstar (barnase inhibitor) M2J83_04360 PF04452 RNA methyltransferase M2J83_04365 PF02779 Transketolase, pyrimidine binding domain M2J83_04365 PF02780 Transketolase, C-terminal domain M2J83_04365 PF00456 Transketolase, thiamine diphosphate binding domain M2J83_04370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M2J83_04370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M2J83_04375 PF00162 Phosphoglycerate kinase M2J83_04385 PF00171 Aldehyde dehydrogenase family M2J83_04395 PF00994 Probable molybdopterin binding domain M2J83_04400 PF01116 Fructose-bisphosphate aldolase class-II M2J83_04405 PF01259 SAICAR synthetase M2J83_04410 PF00731 AIR carboxylase M2J83_04415 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M2J83_04415 PF02222 ATP-grasp domain M2J83_04420 PF03481 Putative GTP-binding controlling metal-binding M2J83_04420 PF01300 Telomere recombination M2J83_04430 PF01575 MaoC like domain M2J83_04430 PF00171 Aldehyde dehydrogenase family M2J83_04435 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_04435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_04435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_04440 PF03466 LysR substrate binding domain M2J83_04450 PF00551 Formyl transferase M2J83_04455 PF01266 FAD dependent oxidoreductase M2J83_04460 PF01613 Flavin reductase like domain M2J83_04465 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M2J83_04465 PF01243 Pyridoxamine 5'-phosphate oxidase M2J83_04475 PF00899 ThiF family M2J83_04485 PF04715 Anthranilate synthase component I, N terminal region M2J83_04485 PF00425 chorismate binding enzyme M2J83_04490 PF17755 UvrA DNA-binding domain M2J83_04490 PF17760 UvrA interaction domain M2J83_04490 PF00005 ABC transporter M2J83_04495 PF00535 Glycosyl transferase family 2 M2J83_04505 PF00005 ABC transporter M2J83_04505 PF12848 ABC transporter M2J83_04525 PF03776 Septum formation topological specificity factor MinE M2J83_04530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M2J83_04535 PF03775 Septum formation inhibitor MinC, C-terminal domain M2J83_04535 PF05209 Septum formation inhibitor MinC, N-terminal domain M2J83_04540 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M2J83_04540 PF00749 tRNA synthetases class I (E and Q), catalytic domain M2J83_04545 PF01654 Cytochrome bd terminal oxidase subunit I M2J83_04550 PF02322 Cytochrome bd terminal oxidase subunit II M2J83_04555 PF00654 Voltage gated chloride channel M2J83_04565 PF00270 DEAD/DEAH box helicase M2J83_04565 PF00271 Helicase conserved C-terminal domain M2J83_04565 PF00570 HRDC domain M2J83_04565 PF16124 RecQ zinc-binding M2J83_04565 PF09382 RQC domain M2J83_04570 PF03477 ATP cone domain M2J83_04570 PF02867 Ribonucleotide reductase, barrel domain M2J83_04570 PF00317 Ribonucleotide reductase, all-alpha domain M2J83_04575 PF00268 Ribonucleotide reductase, small chain M2J83_04580 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_04585 PF16326 ABC transporter C-terminal domain M2J83_04585 PF12848 ABC transporter M2J83_04585 PF00005 ABC transporter M2J83_04595 PF02381 MraZ protein, putative antitoxin-like M2J83_04600 PF01795 MraW methylase family M2J83_04605 PF04999 Cell division protein FtsL M2J83_04610 PF03717 Penicillin-binding Protein dimerisation domain M2J83_04610 PF00905 Penicillin binding protein transpeptidase domain M2J83_04615 PF01225 Mur ligase family, catalytic domain M2J83_04615 PF02875 Mur ligase family, glutamate ligase domain M2J83_04615 PF08245 Mur ligase middle domain M2J83_04620 PF00953 Glycosyl transferase family 4 M2J83_04625 PF08245 Mur ligase middle domain M2J83_04625 PF02875 Mur ligase family, glutamate ligase domain M2J83_04630 PF01098 Cell cycle protein M2J83_04635 PF04101 Glycosyltransferase family 28 C-terminal domain M2J83_04635 PF03033 Glycosyltransferase family 28 N-terminal domain M2J83_04640 PF01225 Mur ligase family, catalytic domain M2J83_04640 PF08245 Mur ligase middle domain M2J83_04640 PF02875 Mur ligase family, glutamate ligase domain M2J83_04645 PF01820 D-ala D-ala ligase N-terminus M2J83_04645 PF07478 D-ala D-ala ligase C-terminus M2J83_04650 PF08478 POTRA domain, FtsQ-type M2J83_04650 PF03799 Cell division protein FtsQ M2J83_04655 PF02491 SHS2 domain inserted in FTSA M2J83_04660 PF12327 FtsZ family, C-terminal domain M2J83_04660 PF00091 Tubulin/FtsZ family, GTPase domain M2J83_04665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M2J83_04675 PF01464 Transglycosylase SLT domain M2J83_04675 PF01551 Peptidase family M23 M2J83_04675 PF10145 Phage-related minor tail protein M2J83_04680 PF07517 SecA DEAD-like domain M2J83_04680 PF02810 SEC-C motif M2J83_04680 PF01043 SecA preprotein cross-linking domain M2J83_04680 PF07516 SecA Wing and Scaffold domain M2J83_04690 PF00571 CBS domain M2J83_04690 PF01769 Divalent cation transporter M2J83_04690 PF03448 MgtE intracellular N domain M2J83_04695 PF03061 Thioesterase superfamily M2J83_04700 PF07687 Peptidase dimerisation domain M2J83_04700 PF01546 Peptidase family M20/M25/M40 M2J83_04705 PF00501 AMP-binding enzyme M2J83_04705 PF13193 AMP-binding enzyme C-terminal domain M2J83_04710 PF00459 Inositol monophosphatase family M2J83_04715 PF01266 FAD dependent oxidoreductase M2J83_04715 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M2J83_04730 PF00005 ABC transporter M2J83_04730 PF09383 NIL domain M2J83_04735 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_04740 PF03180 NLPA lipoprotein M2J83_04745 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_04750 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_04755 PF00005 ABC transporter M2J83_04765 PF00483 Nucleotidyl transferase M2J83_04770 PF01636 Phosphotransferase enzyme family M2J83_04775 PF04453 LPS transport system D M2J83_04780 PF00639 PPIC-type PPIASE domain M2J83_04780 PF09312 SurA N-terminal domain M2J83_04785 PF00398 Ribosomal RNA adenine dimethylase M2J83_04790 PF07670 Nucleoside recognition M2J83_04795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2J83_04805 PF01553 Acyltransferase M2J83_04815 PF02092 Glycyl-tRNA synthetase beta subunit M2J83_04815 PF05746 DALR anticodon binding domain M2J83_04820 PF02091 Glycyl-tRNA synthetase alpha subunit M2J83_04830 PF00378 Enoyl-CoA hydratase/isomerase M2J83_04835 PF05681 Fumarate hydratase (Fumerase) M2J83_04835 PF05683 Fumarase C-terminus M2J83_04840 PF00440 Bacterial regulatory proteins, tetR family M2J83_04850 PF07690 Major Facilitator Superfamily M2J83_04865 PF03167 Uracil DNA glycosylase superfamily M2J83_04870 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M2J83_04875 PF12627 Probable RNA and SrmB- binding site of polymerase A M2J83_04875 PF12626 Polymerase A arginine-rich C-terminus M2J83_04875 PF01743 Poly A polymerase head domain M2J83_04885 PF00308 Bacterial dnaA protein M2J83_04885 PF08299 Bacterial dnaA protein helix-turn-helix M2J83_04890 PF00586 AIR synthase related protein, N-terminal domain M2J83_04890 PF02769 AIR synthase related protein, C-terminal domain M2J83_04895 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M2J83_04905 PF08676 MutL C terminal dimerisation domain M2J83_04905 PF01119 DNA mismatch repair protein, C-terminal domain M2J83_04910 PF09335 SNARE associated Golgi protein M2J83_04915 PF01520 N-acetylmuramoyl-L-alanine amidase M2J83_04915 PF11741 AMIN domain M2J83_04920 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M2J83_04930 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_04965 PF00535 Glycosyl transferase family 2 M2J83_04970 PF00390 Malic enzyme, N-terminal domain M2J83_04970 PF03949 Malic enzyme, NAD binding domain M2J83_04970 PF01515 Phosphate acetyl/butaryl transferase M2J83_04975 PF03466 LysR substrate binding domain M2J83_04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_04980 PF00171 Aldehyde dehydrogenase family M2J83_04985 PF00701 Dihydrodipicolinate synthetase family M2J83_04995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_05005 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_05035 PF01638 HxlR-like helix-turn-helix M2J83_05040 PF13460 NAD(P)H-binding M2J83_05050 PF07690 Major Facilitator Superfamily M2J83_05055 PF04073 Aminoacyl-tRNA editing domain M2J83_05060 PF00589 Phage integrase family M2J83_05060 PF02899 Phage integrase, N-terminal SAM-like domain M2J83_05070 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_05075 PF00005 ABC transporter M2J83_05075 PF03459 TOBE domain M2J83_05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_05080 PF03459 TOBE domain M2J83_05090 PF13361 UvrD-like helicase C-terminal domain M2J83_05090 PF12705 PD-(D/E)XK nuclease superfamily M2J83_05090 PF00580 UvrD/REP helicase N-terminal domain M2J83_05100 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M2J83_05100 PF12169 DNA polymerase III subunits gamma and tau domain III M2J83_05100 PF12170 DNA polymerase III tau subunit V interacting with alpha M2J83_05105 PF02575 YbaB/EbfC DNA-binding family M2J83_05110 PF13662 Toprim domain M2J83_05110 PF02132 RecR protein M2J83_05115 PF09084 NMT1/THI5 like M2J83_05120 PF00005 ABC transporter M2J83_05125 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_05140 PF07715 TonB-dependent Receptor Plug Domain M2J83_05140 PF00593 TonB dependent receptor M2J83_05150 PF00923 Transaldolase/Fructose-6-phosphate aldolase M2J83_05155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M2J83_05155 PF00117 Glutamine amidotransferase class-I M2J83_05160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2J83_05160 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M2J83_05160 PF02142 MGS-like domain M2J83_05175 PF00300 Histidine phosphatase superfamily (branch 1) M2J83_05180 PF00860 Permease family M2J83_05185 PF03449 Transcription elongation factor, N-terminal M2J83_05185 PF01272 Transcription elongation factor, GreA/GreB, C-term M2J83_05190 PF01985 CRS1 / YhbY (CRM) domain M2J83_05195 PF01728 FtsJ-like methyltransferase M2J83_05200 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_05200 PF17862 AAA+ lid domain M2J83_05200 PF06480 FtsH Extracellular M2J83_05200 PF01434 Peptidase family M41 M2J83_05205 PF00809 Pterin binding enzyme M2J83_05210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2J83_05210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2J83_05210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2J83_05210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2J83_05220 PF02541 Ppx/GppA phosphatase family M2J83_05225 PF02503 Polyphosphate kinase middle domain M2J83_05225 PF13090 Polyphosphate kinase C-terminal domain 2 M2J83_05225 PF17941 Polyphosphate kinase C-terminal domain 1 M2J83_05225 PF13089 Polyphosphate kinase N-terminal domain M2J83_05230 PF12849 PBP superfamily domain M2J83_05235 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_05240 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_05245 PF00005 ABC transporter M2J83_05250 PF00501 AMP-binding enzyme M2J83_05250 PF13193 AMP-binding enzyme C-terminal domain M2J83_05265 PF00486 Transcriptional regulatory protein, C terminal M2J83_05265 PF00072 Response regulator receiver domain M2J83_05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_05285 PF03466 LysR substrate binding domain M2J83_05300 PF01593 Flavin containing amine oxidoreductase M2J83_05305 PF00034 Cytochrome c M2J83_05305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_05310 PF04239 Protein of unknown function (DUF421) M2J83_05320 PF00884 Sulfatase M2J83_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_05330 PF03466 LysR substrate binding domain M2J83_05350 PF00474 Sodium:solute symporter family M2J83_05355 PF07848 PaaX-like protein M2J83_05355 PF08223 PaaX-like protein C-terminal domain M2J83_05360 PF13091 PLD-like domain M2J83_05360 PF13396 Phospholipase_D-nuclease N-terminal M2J83_05375 PF01300 Telomere recombination M2J83_05380 PF02163 Peptidase family M50 M2J83_05385 PF00701 Dihydrodipicolinate synthetase family M2J83_05390 PF06804 NlpB/DapX lipoprotein M2J83_05410 PF00202 Aminotransferase class-III M2J83_05415 PF00155 Aminotransferase class I and II M2J83_05420 PF00067 Cytochrome P450 M2J83_05430 PF03594 Benzoate membrane transport protein M2J83_05435 PF08007 Cupin superfamily protein M2J83_05440 PF05190 MutS family domain IV M2J83_05440 PF00488 MutS domain V M2J83_05440 PF05192 MutS domain III M2J83_05440 PF05188 MutS domain II M2J83_05440 PF01624 MutS domain I M2J83_05450 PF07715 TonB-dependent Receptor Plug Domain M2J83_05450 PF00593 TonB dependent receptor M2J83_05455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_05460 PF00005 ABC transporter M2J83_05460 PF02687 FtsX-like permease family M2J83_05460 PF12704 MacB-like periplasmic core domain M2J83_05465 PF02321 Outer membrane efflux protein M2J83_05470 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M2J83_05475 PF00664 ABC transporter transmembrane region M2J83_05475 PF00005 ABC transporter M2J83_05485 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_05490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_05490 PF03466 LysR substrate binding domain M2J83_05495 PF00296 Luciferase-like monooxygenase M2J83_05505 PF05552 Conserved TM helix M2J83_05505 PF00924 Mechanosensitive ion channel M2J83_05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_05510 PF03466 LysR substrate binding domain M2J83_05515 PF00698 Acyl transferase domain M2J83_05515 PF00109 Beta-ketoacyl synthase, N-terminal domain M2J83_05515 PF02801 Beta-ketoacyl synthase, C-terminal domain M2J83_05515 PF08659 KR domain M2J83_05515 PF00550 Phosphopantetheine attachment site M2J83_05515 PF14765 Polyketide synthase dehydratase M2J83_05515 PF16197 Ketoacyl-synthetase C-terminal extension M2J83_05520 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M2J83_05535 PF01039 Carboxyl transferase domain M2J83_05540 PF06857 Malonate decarboxylase delta subunit (MdcD) M2J83_05545 PF16957 Malonate decarboxylase, alpha subunit, transporter M2J83_05550 PF01425 Amidase M2J83_05560 PF00588 SpoU rRNA Methylase family M2J83_05565 PF00459 Inositol monophosphatase family M2J83_05570 PF03471 Transporter associated domain M2J83_05570 PF03741 Integral membrane protein TerC family M2J83_05575 PF02673 Bacitracin resistance protein BacA M2J83_05580 PF00149 Calcineurin-like phosphoesterase M2J83_05585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M2J83_05595 PF01406 tRNA synthetases class I (C) catalytic domain M2J83_05595 PF09190 DALR domain M2J83_05605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M2J83_05610 PF01171 PP-loop family M2J83_05610 PF09179 TilS substrate binding domain M2J83_05615 PF00696 Amino acid kinase family M2J83_05615 PF01842 ACT domain M2J83_05615 PF13840 ACT domain M2J83_05635 PF01145 SPFH domain / Band 7 family M2J83_05645 PF02311 AraC-like ligand binding domain M2J83_05645 PF12833 Helix-turn-helix domain M2J83_05650 PF00795 Carbon-nitrogen hydrolase M2J83_05660 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_05670 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_05675 PF00005 ABC transporter M2J83_05675 PF08402 TOBE domain M2J83_05680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M2J83_05680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M2J83_05685 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M2J83_05690 PF02233 NAD(P) transhydrogenase beta subunit M2J83_05715 PF01070 FMN-dependent dehydrogenase M2J83_05720 PF13409 Glutathione S-transferase, N-terminal domain M2J83_05725 PF03358 NADPH-dependent FMN reductase M2J83_05740 PF02245 Methylpurine-DNA glycosylase (MPG) M2J83_05745 PF00962 Adenosine/AMP deaminase M2J83_05750 PF04241 Protein of unknown function (DUF423) M2J83_05755 PF01544 CorA-like Mg2+ transporter protein M2J83_05760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_05760 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_05760 PF18158 Adaptive response protein AidB N-terminal domain M2J83_05770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2J83_05775 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_05780 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_05780 PF12911 N-terminal TM domain of oligopeptide transport permease C M2J83_05785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2J83_05785 PF00005 ABC transporter M2J83_05795 PF02954 Bacterial regulatory protein, Fis family M2J83_05795 PF00158 Sigma-54 interaction domain M2J83_05795 PF01590 GAF domain M2J83_05800 PF00171 Aldehyde dehydrogenase family M2J83_05805 PF00465 Iron-containing alcohol dehydrogenase M2J83_05810 PF14338 Mrr N-terminal domain M2J83_05810 PF04471 Restriction endonuclease M2J83_05820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_05825 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_05835 PF00108 Thiolase, N-terminal domain M2J83_05835 PF02803 Thiolase, C-terminal domain M2J83_05840 PF13193 AMP-binding enzyme C-terminal domain M2J83_05840 PF00501 AMP-binding enzyme M2J83_05855 PF01132 Elongation factor P (EF-P) OB domain M2J83_05855 PF08207 Elongation factor P (EF-P) KOW-like domain M2J83_05855 PF09285 Elongation factor P, C-terminal M2J83_05870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_05870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_05880 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_05885 PF06434 Aconitate hydratase 2 N-terminus M2J83_05885 PF11791 Aconitate B N-terminal domain M2J83_05885 PF00330 Aconitase family (aconitate hydratase) M2J83_05900 PF00285 Citrate synthase, C-terminal domain M2J83_05910 PF02954 Bacterial regulatory protein, Fis family M2J83_05910 PF06506 Propionate catabolism activator M2J83_05910 PF00158 Sigma-54 interaction domain M2J83_05915 PF07690 Major Facilitator Superfamily M2J83_05925 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M2J83_05925 PF00056 lactate/malate dehydrogenase, NAD binding domain M2J83_05930 PF00392 Bacterial regulatory proteins, gntR family M2J83_05930 PF07702 UTRA domain M2J83_05935 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M2J83_05945 PF02910 Fumarate reductase flavoprotein C-term M2J83_05945 PF00890 FAD binding domain M2J83_05950 PF13085 2Fe-2S iron-sulfur cluster binding domain M2J83_05955 PF03937 Flavinator of succinate dehydrogenase M2J83_05960 PF00285 Citrate synthase, C-terminal domain M2J83_05965 PF07729 FCD domain M2J83_05965 PF00392 Bacterial regulatory proteins, gntR family M2J83_05970 PF02652 L-lactate permease M2J83_05975 PF01515 Phosphate acetyl/butaryl transferase M2J83_05975 PF03949 Malic enzyme, NAD binding domain M2J83_05975 PF00390 Malic enzyme, N-terminal domain M2J83_05980 PF02779 Transketolase, pyrimidine binding domain M2J83_05980 PF16870 2-oxoglutarate dehydrogenase C-terminal M2J83_05980 PF00676 Dehydrogenase E1 component M2J83_05980 PF16078 2-oxoglutarate dehydrogenase N-terminus M2J83_05985 PF02817 e3 binding domain M2J83_05985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2J83_05985 PF00364 Biotin-requiring enzyme M2J83_05990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2J83_05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_05995 PF03969 AFG1-like ATPase M2J83_06000 PF00579 tRNA synthetases class I (W and Y) M2J83_06005 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_06020 PF00575 S1 RNA binding domain M2J83_06020 PF17674 HHH domain M2J83_06020 PF09371 Tex-like protein N-terminal domain M2J83_06020 PF16921 Tex protein YqgF-like domain M2J83_06025 PF13307 Helicase C-terminal domain M2J83_06025 PF04851 Type III restriction enzyme, res subunit M2J83_06035 PF01638 HxlR-like helix-turn-helix M2J83_06050 PF06249 Ethanolamine utilisation protein EutQ M2J83_06060 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_06070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_06070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M2J83_06075 PF08361 MAATS-type transcriptional repressor, C-terminal region M2J83_06075 PF00440 Bacterial regulatory proteins, tetR family M2J83_06080 PF13525 Outer membrane lipoprotein M2J83_06085 PF00849 RNA pseudouridylate synthase M2J83_06085 PF01479 S4 domain M2J83_06090 PF02578 Multi-copper polyphenol oxidoreductase laccase M2J83_06095 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus M2J83_06100 PF00106 short chain dehydrogenase M2J83_06105 PF05233 PHB accumulation regulatory domain M2J83_06105 PF07879 PHB/PHA accumulation regulator DNA-binding domain M2J83_06130 PF04079 Segregation and condensation complex subunit ScpB M2J83_06135 PF00849 RNA pseudouridylate synthase M2J83_06135 PF01479 S4 domain M2J83_06140 PF02576 RimP N-terminal domain M2J83_06140 PF17384 RimP C-terminal SH3 domain M2J83_06145 PF13184 NusA-like KH domain M2J83_06145 PF08529 NusA N-terminal domain M2J83_06150 PF00009 Elongation factor Tu GTP binding domain M2J83_06150 PF04760 Translation initiation factor IF-2, N-terminal region M2J83_06150 PF08364 Bacterial translation initiation factor IF-2 associated region M2J83_06150 PF11987 Translation-initiation factor 2 M2J83_06155 PF02033 Ribosome-binding factor A M2J83_06160 PF16198 tRNA pseudouridylate synthase B C-terminal domain M2J83_06160 PF01509 TruB family pseudouridylate synthase (N terminal domain) M2J83_06165 PF00679 Elongation factor G C-terminus M2J83_06165 PF00009 Elongation factor Tu GTP binding domain M2J83_06165 PF03144 Elongation factor Tu domain 2 M2J83_06170 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_06180 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_06185 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_06190 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_06195 PF03641 Possible lysine decarboxylase M2J83_06200 PF00476 DNA polymerase family A M2J83_06200 PF01367 5'-3' exonuclease, C-terminal SAM fold M2J83_06200 PF01612 3'-5' exonuclease M2J83_06200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M2J83_06205 PF02690 Na+/Pi-cotransporter M2J83_06215 PF00456 Transketolase, thiamine diphosphate binding domain M2J83_06215 PF17831 Pyruvate dehydrogenase E1 component middle domain M2J83_06225 PF00583 Acetyltransferase (GNAT) family M2J83_06230 PF01435 Peptidase family M48 M2J83_06240 PF00581 Rhodanese-like domain M2J83_06245 PF02609 Exonuclease VII small subunit M2J83_06250 PF00348 Polyprenyl synthetase M2J83_06255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M2J83_06255 PF02780 Transketolase, C-terminal domain M2J83_06255 PF02779 Transketolase, pyrimidine binding domain M2J83_06260 PF02649 Type I GTP cyclohydrolase folE2 M2J83_06265 PF01250 Ribosomal protein S6 M2J83_06275 PF01084 Ribosomal protein S18 M2J83_06280 PF03948 Ribosomal protein L9, C-terminal domain M2J83_06280 PF01281 Ribosomal protein L9, N-terminal domain M2J83_06285 PF00772 DnaB-like helicase N terminal domain M2J83_06285 PF03796 DnaB-like helicase C terminal domain M2J83_06290 PF13593 SBF-like CPA transporter family (DUF4137) M2J83_06295 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M2J83_06300 PF13638 PIN domain M2J83_06300 PF02562 PhoH-like protein M2J83_06305 PF00578 AhpC/TSA family M2J83_06310 PF04430 Protein of unknown function (DUF498/DUF598) M2J83_06315 PF00155 Aminotransferase class I and II M2J83_06320 PF01842 ACT domain M2J83_06320 PF00742 Homoserine dehydrogenase M2J83_06320 PF03447 Homoserine dehydrogenase, NAD binding domain M2J83_06325 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_06325 PF14821 Threonine synthase N terminus M2J83_06330 PF13302 Acetyltransferase (GNAT) domain M2J83_06350 PF00842 Alanine racemase, C-terminal domain M2J83_06350 PF01168 Alanine racemase, N-terminal domain M2J83_06360 PF18073 Rubredoxin metal binding domain M2J83_06375 PF13416 Bacterial extracellular solute-binding protein M2J83_06380 PF08402 TOBE domain M2J83_06380 PF00005 ABC transporter M2J83_06385 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_06390 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_06395 PF03960 ArsC family M2J83_06400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M2J83_06405 PF01895 PhoU domain M2J83_06410 PF00360 Phytochrome region M2J83_06410 PF00990 Diguanylate cyclase, GGDEF domain M2J83_06410 PF01590 GAF domain M2J83_06410 PF00563 EAL domain M2J83_06415 PF01740 STAS domain M2J83_06415 PF00916 Sulfate permease family M2J83_06420 PF04362 Bacterial Fe(2+) trafficking M2J83_06425 PF00696 Amino acid kinase family M2J83_06425 PF00583 Acetyltransferase (GNAT) family M2J83_06430 PF11898 Domain of unknown function (DUF3418) M2J83_06430 PF00270 DEAD/DEAH box helicase M2J83_06430 PF00271 Helicase conserved C-terminal domain M2J83_06430 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M2J83_06430 PF04408 Helicase associated domain (HA2) M2J83_06435 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2J83_06435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2J83_06435 PF14579 Helix-hairpin-helix motif M2J83_06435 PF02811 PHP domain M2J83_06435 PF01336 OB-fold nucleic acid binding domain M2J83_06440 PF00534 Glycosyl transferases group 1 M2J83_06440 PF13579 Glycosyl transferase 4-like domain M2J83_06445 PF01522 Polysaccharide deacetylase M2J83_06450 PF00535 Glycosyl transferase family 2 M2J83_06460 PF00534 Glycosyl transferases group 1 M2J83_06460 PF13439 Glycosyltransferase Family 4 M2J83_06470 PF03692 Putative zinc- or iron-chelating domain M2J83_06485 PF00005 ABC transporter M2J83_06485 PF00664 ABC transporter transmembrane region M2J83_06505 PF01979 Amidohydrolase family M2J83_06505 PF13382 Adenine deaminase C-terminal domain M2J83_06510 PF01979 Amidohydrolase family M2J83_06515 PF10150 Ribonuclease E/G family M2J83_06515 PF00575 S1 RNA binding domain M2J83_06550 PF07729 FCD domain M2J83_06550 PF00392 Bacterial regulatory proteins, gntR family M2J83_06555 PF02913 FAD linked oxidases, C-terminal domain M2J83_06555 PF01565 FAD binding domain M2J83_06560 PF01565 FAD binding domain M2J83_06565 PF02754 Cysteine-rich domain M2J83_06565 PF13183 4Fe-4S dicluster domain M2J83_06590 PF01594 AI-2E family transporter M2J83_06595 PF02690 Na+/Pi-cotransporter M2J83_06610 PF13609 Gram-negative porin M2J83_06620 PF00892 EamA-like transporter family M2J83_06630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_06630 PF03466 LysR substrate binding domain M2J83_06635 PF03601 Conserved hypothetical protein 698 M2J83_06640 PF04247 Invasion gene expression up-regulator, SirB M2J83_06645 PF00753 Metallo-beta-lactamase superfamily M2J83_06655 PF04143 Sulphur transport M2J83_06665 PF13411 MerR HTH family regulatory protein M2J83_06670 PF00403 Heavy-metal-associated domain M2J83_06675 PF01740 STAS domain M2J83_06675 PF00916 Sulfate permease family M2J83_06680 PF03781 Sulfatase-modifying factor enzyme 1 M2J83_06685 PF00884 Sulfatase M2J83_06690 PF05154 TM2 domain M2J83_06695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M2J83_06695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M2J83_06700 PF01266 FAD dependent oxidoreductase M2J83_06700 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M2J83_06705 PF00877 NlpC/P60 family M2J83_06710 PF05247 Flagellar transcriptional activator (FlhD) M2J83_06715 PF05280 Flagellar transcriptional activator (FlhC) M2J83_06720 PF01618 MotA/TolQ/ExbB proton channel family M2J83_06725 PF13677 Membrane MotB of proton-channel complex MotA/MotB M2J83_06725 PF00691 OmpA family M2J83_06730 PF01627 Hpt domain M2J83_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_06730 PF01584 CheW-like domain M2J83_06730 PF02895 Signal transducing histidine kinase, homodimeric domain M2J83_06730 PF09078 CheY binding M2J83_06735 PF01584 CheW-like domain M2J83_06740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_06740 PF02203 Tar ligand binding domain homologue M2J83_06740 PF00672 HAMP domain M2J83_06745 PF01739 CheR methyltransferase, SAM binding domain M2J83_06745 PF03705 CheR methyltransferase, all-alpha domain M2J83_06750 PF01339 CheB methylesterase M2J83_06750 PF00072 Response regulator receiver domain M2J83_06755 PF00072 Response regulator receiver domain M2J83_06760 PF04344 Chemotaxis phosphatase, CheZ M2J83_06765 PF01312 FlhB HrpN YscU SpaS Family M2J83_06770 PF00771 FHIPEP family M2J83_06775 PF00448 SRP54-type protein, GTPase domain M2J83_06780 PF07804 HipA-like C-terminal domain M2J83_06780 PF13657 HipA N-terminal domain M2J83_06795 PF04316 Anti-sigma-28 factor, FlgM M2J83_06805 PF00460 Flagella basal body rod protein M2J83_06810 PF00460 Flagella basal body rod protein M2J83_06810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M2J83_06815 PF13860 FlgD Ig-like domain M2J83_06815 PF13861 FlgD Tudor-like domain M2J83_06815 PF03963 Flagellar hook capping protein - N-terminal region M2J83_06820 PF07559 Flagellar basal body protein FlaE M2J83_06820 PF00460 Flagella basal body rod protein M2J83_06820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M2J83_06825 PF00460 Flagella basal body rod protein M2J83_06825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M2J83_06830 PF00460 Flagella basal body rod protein M2J83_06830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M2J83_06835 PF02107 Flagellar L-ring protein M2J83_06840 PF02119 Flagellar P-ring protein M2J83_06845 PF10135 Rod binding protein M2J83_06845 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2J83_06850 PF00460 Flagella basal body rod protein M2J83_06850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M2J83_06855 PF00669 Bacterial flagellin N-terminal helical region M2J83_06860 PF00672 HAMP domain M2J83_06860 PF02203 Tar ligand binding domain homologue M2J83_06860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_06870 PF02203 Tar ligand binding domain homologue M2J83_06870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_06870 PF00672 HAMP domain M2J83_06880 PF14579 Helix-hairpin-helix motif M2J83_06880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2J83_06880 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2J83_06880 PF02811 PHP domain M2J83_06880 PF00929 Exonuclease M2J83_06885 PF01311 Bacterial export proteins, family 1 M2J83_06890 PF01313 Bacterial export proteins, family 3 M2J83_06895 PF00813 FliP family M2J83_06900 PF04347 Flagellar biosynthesis protein, FliO M2J83_06905 PF16973 Flagellar motor switch protein FliN N-terminal M2J83_06905 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M2J83_06910 PF02154 Flagellar motor switch protein FliM M2J83_06910 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M2J83_06915 PF03748 Flagellar basal body-associated protein FliL M2J83_06930 PF18269 T3SS EscN ATPase C-terminal domain M2J83_06930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2J83_06940 PF01706 FliG C-terminal domain M2J83_06940 PF14842 FliG N-terminal domain M2J83_06940 PF14841 FliG middle domain M2J83_06945 PF01514 Secretory protein of YscJ/FliF family M2J83_06945 PF08345 Flagellar M-ring protein C-terminal M2J83_06950 PF02049 Flagellar hook-basal body complex protein FliE M2J83_06955 PF01312 FlhB HrpN YscU SpaS Family M2J83_06970 PF02561 Flagellar protein FliS M2J83_06975 PF07196 Flagellin hook IN motif M2J83_06975 PF07195 Flagellar hook-associated protein 2 C-terminus M2J83_06975 PF02465 Flagellar hook-associated protein 2 N-terminus M2J83_06980 PF03646 FlaG protein M2J83_06985 PF04545 Sigma-70, region 4 M2J83_06985 PF04539 Sigma-70 region 3 M2J83_06985 PF04542 Sigma-70 region 2 M2J83_06995 PF00700 Bacterial flagellin C-terminal helical region M2J83_06995 PF08884 Flagellin D3 domain M2J83_06995 PF00669 Bacterial flagellin N-terminal helical region M2J83_07030 PF00005 ABC transporter M2J83_07040 PF03781 Sulfatase-modifying factor enzyme 1 M2J83_07060 PF04286 Protein of unknown function (DUF445) M2J83_07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_07065 PF08447 PAS fold M2J83_07070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_07070 PF08447 PAS fold M2J83_07080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M2J83_07080 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M2J83_07085 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_07105 PF01381 Helix-turn-helix M2J83_07115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M2J83_07120 PF00005 ABC transporter M2J83_07125 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_07135 PF03466 LysR substrate binding domain M2J83_07145 PF01425 Amidase M2J83_07160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_07165 PF03831 PhnA domain M2J83_07165 PF08274 PhnA Zinc-Ribbon M2J83_07180 PF07715 TonB-dependent Receptor Plug Domain M2J83_07185 PF03150 Di-haem cytochrome c peroxidase M2J83_07195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_07205 PF00324 Amino acid permease M2J83_07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_07225 PF03466 LysR substrate binding domain M2J83_07230 PF07007 Lysozyme inhibitor LprI M2J83_07235 PF00230 Major intrinsic protein M2J83_07270 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding M2J83_07270 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_07270 PF10518 TAT (twin-arginine translocation) pathway signal sequence M2J83_07295 PF00313 'Cold-shock' DNA-binding domain M2J83_07300 PF08521 Two-component sensor kinase N-terminal M2J83_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_07300 PF00512 His Kinase A (phospho-acceptor) domain M2J83_07305 PF00072 Response regulator receiver domain M2J83_07305 PF00486 Transcriptional regulatory protein, C terminal M2J83_07310 PF00115 Cytochrome C and Quinol oxidase polypeptide I M2J83_07320 PF00034 Cytochrome c M2J83_07325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_07330 PF00149 Calcineurin-like phosphoesterase M2J83_07345 PF01914 MarC family integral membrane protein M2J83_07355 PF00999 Sodium/hydrogen exchanger family M2J83_07365 PF00529 HlyD membrane-fusion protein of T1SS M2J83_07365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_07370 PF12805 FUSC-like inner membrane protein yccS M2J83_07375 PF00860 Permease family M2J83_07395 PF02630 SCO1/SenC M2J83_07410 PF01645 Conserved region in glutamate synthase M2J83_07420 PF12802 MarR family M2J83_07425 PF02464 Competence-damaged protein M2J83_07425 PF00994 Probable molybdopterin binding domain M2J83_07430 PF00330 Aconitase family (aconitate hydratase) M2J83_07430 PF00694 Aconitase C-terminal domain M2J83_07440 PF04303 PrpF protein M2J83_07445 PF12833 Helix-turn-helix domain M2J83_07455 PF00355 Rieske [2Fe-2S] domain M2J83_07455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M2J83_07460 PF00866 Ring hydroxylating beta subunit M2J83_07475 PF01593 Flavin containing amine oxidoreductase M2J83_07480 PF00924 Mechanosensitive ion channel M2J83_07480 PF12794 Mechanosensitive ion channel inner membrane domain 1 M2J83_07480 PF12795 Mechanosensitive ion channel porin domain M2J83_07485 PF12794 Mechanosensitive ion channel inner membrane domain 1 M2J83_07485 PF12795 Mechanosensitive ion channel porin domain M2J83_07485 PF00924 Mechanosensitive ion channel M2J83_07490 PF00083 Sugar (and other) transporter M2J83_07490 PF08946 Osmosensory transporter coiled coil M2J83_07505 PF01381 Helix-turn-helix M2J83_07510 PF00072 Response regulator receiver domain M2J83_07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_07515 PF00512 His Kinase A (phospho-acceptor) domain M2J83_07515 PF01627 Hpt domain M2J83_07515 PF00072 Response regulator receiver domain M2J83_07520 PF03448 MgtE intracellular N domain M2J83_07520 PF01769 Divalent cation transporter M2J83_07520 PF00571 CBS domain M2J83_07530 PF06965 Na+/H+ antiporter 1 M2J83_07535 PF02580 D-Tyr-tRNA(Tyr) deacylase M2J83_07540 PF00893 Small Multidrug Resistance protein M2J83_07550 PF00583 Acetyltransferase (GNAT) family M2J83_07560 PF01435 Peptidase family M48 M2J83_07565 PF07690 Major Facilitator Superfamily M2J83_07570 PF00589 Phage integrase family M2J83_07715 PF02413 Caudovirales tail fibre assembly protein, lambda gpK M2J83_07730 PF00574 Clp protease M2J83_07835 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system M2J83_07840 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M2J83_07850 PF01726 LexA DNA binding domain M2J83_07850 PF00717 Peptidase S24-like M2J83_07970 PF00959 Phage lysozyme M2J83_08020 PF00990 Diguanylate cyclase, GGDEF domain M2J83_08035 PF01037 Lrp/AsnC ligand binding domain M2J83_08035 PF13404 AsnC-type helix-turn-helix domain M2J83_08040 PF01053 Cys/Met metabolism PLP-dependent enzyme M2J83_08050 PF00293 NUDIX domain M2J83_08055 PF04304 Protein of unknown function (DUF454) M2J83_08065 PF00764 Arginosuccinate synthase M2J83_08070 PF00117 Glutamine amidotransferase class-I M2J83_08070 PF02540 NAD synthase M2J83_08070 PF00958 GMP synthase C terminal domain M2J83_08080 PF03814 Potassium-transporting ATPase A subunit M2J83_08085 PF02669 K+-transporting ATPase, c chain M2J83_08095 PF02702 Osmosensitive K+ channel His kinase sensor domain M2J83_08095 PF00512 His Kinase A (phospho-acceptor) domain M2J83_08095 PF13492 GAF domain M2J83_08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_08095 PF13493 Domain of unknown function (DUF4118) M2J83_08100 PF00072 Response regulator receiver domain M2J83_08100 PF00486 Transcriptional regulatory protein, C terminal M2J83_08105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M2J83_08105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M2J83_08115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2J83_08115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2J83_08120 PF01649 Ribosomal protein S20 M2J83_08125 PF03023 Lipid II flippase MurJ M2J83_08130 PF00106 short chain dehydrogenase M2J83_08135 PF05191 Adenylate kinase, active site lid M2J83_08140 PF02348 Cytidylyltransferase M2J83_08145 PF03966 Trm112p-like protein M2J83_08150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M2J83_08155 PF02472 Biopolymer transport protein ExbD/TolR M2J83_08160 PF01618 MotA/TolQ/ExbB proton channel family M2J83_08165 PF13742 OB-fold nucleic acid binding domain M2J83_08165 PF02601 Exonuclease VII, large subunit M2J83_08170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M2J83_08170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M2J83_08175 PF00210 Ferritin-like domain M2J83_08180 PF02803 Thiolase, C-terminal domain M2J83_08180 PF00108 Thiolase, N-terminal domain M2J83_08190 PF00313 'Cold-shock' DNA-binding domain M2J83_08195 PF02617 ATP-dependent Clp protease adaptor protein ClpS M2J83_08200 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_08200 PF07724 AAA domain (Cdc48 subfamily) M2J83_08200 PF17871 AAA lid domain M2J83_08200 PF02861 Clp amino terminal domain, pathogenicity island component M2J83_08200 PF10431 C-terminal, D2-small domain, of ClpB protein M2J83_08205 PF04403 Paraquat-inducible protein A M2J83_08210 PF02470 MlaD protein M2J83_08220 PF00171 Aldehyde dehydrogenase family M2J83_08220 PF01619 Proline dehydrogenase M2J83_08220 PF14850 DNA-binding domain of Proline dehydrogenase M2J83_08220 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M2J83_08225 PF13458 Periplasmic binding protein M2J83_08230 PF02653 Branched-chain amino acid transport system / permease component M2J83_08235 PF02653 Branched-chain amino acid transport system / permease component M2J83_08235 PF11862 Domain of unknown function (DUF3382) M2J83_08240 PF00005 ABC transporter M2J83_08240 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2J83_08245 PF00005 ABC transporter M2J83_08265 PF00106 short chain dehydrogenase M2J83_08275 PF05971 RNA methyltransferase M2J83_08280 PF00692 dUTPase M2J83_08285 PF04127 DNA / pantothenate metabolism flavoprotein M2J83_08285 PF02441 Flavoprotein M2J83_08290 PF01252 Signal peptidase (SPase) II M2J83_08295 PF08264 Anticodon-binding domain of tRNA M2J83_08295 PF00133 tRNA synthetases class I (I, L, M and V) M2J83_08295 PF06827 Zinc finger found in FPG and IleRS M2J83_08300 PF01687 Riboflavin kinase M2J83_08300 PF06574 FAD synthetase M2J83_08305 PF00551 Formyl transferase M2J83_08310 PF01029 NusB family M2J83_08310 PF01189 16S rRNA methyltransferase RsmB/F M2J83_08320 PF00580 UvrD/REP helicase N-terminal domain M2J83_08320 PF13361 UvrD-like helicase C-terminal domain M2J83_08345 PF00440 Bacterial regulatory proteins, tetR family M2J83_08345 PF02909 Tetracyclin repressor-like, C-terminal domain M2J83_08350 PF13533 Biotin-lipoyl like M2J83_08365 PF07690 Major Facilitator Superfamily M2J83_08375 PF00005 ABC transporter M2J83_08375 PF12848 ABC transporter M2J83_08380 PF05175 Methyltransferase small domain M2J83_08385 PF07687 Peptidase dimerisation domain M2J83_08385 PF01546 Peptidase family M20/M25/M40 M2J83_08390 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_08390 PF14602 Hexapeptide repeat of succinyl-transferase M2J83_08390 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M2J83_08400 PF02311 AraC-like ligand binding domain M2J83_08400 PF12833 Helix-turn-helix domain M2J83_08410 PF03600 Citrate transporter M2J83_08410 PF02080 TrkA-C domain M2J83_08455 PF00376 MerR family regulatory protein M2J83_08455 PF09278 MerR, DNA binding M2J83_08460 PF07690 Major Facilitator Superfamily M2J83_08470 PF02515 CoA-transferase family III M2J83_08475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M2J83_08475 PF05698 Bacterial trigger factor protein (TF) C-terminus M2J83_08475 PF05697 Bacterial trigger factor protein (TF) M2J83_08480 PF00574 Clp protease M2J83_08485 PF06689 ClpX C4-type zinc finger M2J83_08485 PF10431 C-terminal, D2-small domain, of ClpB protein M2J83_08485 PF07724 AAA domain (Cdc48 subfamily) M2J83_08490 PF02190 ATP-dependent protease La (LON) substrate-binding domain M2J83_08490 PF05362 Lon protease (S16) C-terminal proteolytic domain M2J83_08490 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_08495 PF01726 LexA DNA binding domain M2J83_08495 PF00717 Peptidase S24-like M2J83_08500 PF13302 Acetyltransferase (GNAT) domain M2J83_08505 PF00155 Aminotransferase class I and II M2J83_08510 PF17757 UvrB interaction domain M2J83_08510 PF12344 Ultra-violet resistance protein B M2J83_08510 PF02151 UvrB/uvrC motif M2J83_08510 PF04851 Type III restriction enzyme, res subunit M2J83_08510 PF00271 Helicase conserved C-terminal domain M2J83_08515 PF01451 Low molecular weight phosphotyrosine protein phosphatase M2J83_08520 PF02082 Transcriptional regulator M2J83_08525 PF00266 Aminotransferase class-V M2J83_08530 PF01592 NifU-like N terminal domain M2J83_08535 PF01521 Iron-sulphur cluster biosynthesis M2J83_08540 PF02142 MGS-like domain M2J83_08545 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_08550 PF01336 OB-fold nucleic acid binding domain M2J83_08550 PF00152 tRNA synthetases class II (D, K and N) M2J83_08555 PF00106 short chain dehydrogenase M2J83_08565 PF02203 Tar ligand binding domain homologue M2J83_08565 PF00672 HAMP domain M2J83_08565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_08570 PF01176 Translation initiation factor 1A / IF-1 M2J83_08575 PF00892 EamA-like transporter family M2J83_08580 PF01758 Sodium Bile acid symporter family M2J83_08590 PF17768 RecJ OB domain M2J83_08590 PF01368 DHH family M2J83_08590 PF02272 DHHA1 domain M2J83_08600 PF02687 FtsX-like permease family M2J83_08600 PF12704 MacB-like periplasmic core domain M2J83_08605 PF00005 ABC transporter M2J83_08610 PF01026 TatD related DNase M2J83_08615 PF00753 Metallo-beta-lactamase superfamily M2J83_08615 PF03772 Competence protein M2J83_08620 PF12697 Alpha/beta hydrolase family M2J83_08625 PF02811 PHP domain M2J83_08630 PF03449 Transcription elongation factor, N-terminal M2J83_08630 PF01272 Transcription elongation factor, GreA/GreB, C-term M2J83_08635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M2J83_08635 PF02769 AIR synthase related protein, C-terminal domain M2J83_08635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M2J83_08640 PF00478 IMP dehydrogenase / GMP reductase domain M2J83_08640 PF00571 CBS domain M2J83_08660 PF00117 Glutamine amidotransferase class-I M2J83_08660 PF00958 GMP synthase C terminal domain M2J83_08660 PF02540 NAD synthase M2J83_08715 PF01758 Sodium Bile acid symporter family M2J83_08725 PF03358 NADPH-dependent FMN reductase M2J83_08755 PF02796 Helix-turn-helix domain of resolvase M2J83_08755 PF00239 Resolvase, N terminal domain M2J83_08765 PF00589 Phage integrase family M2J83_08765 PF13495 Phage integrase, N-terminal SAM-like domain M2J83_08770 PF02796 Helix-turn-helix domain of resolvase M2J83_08770 PF00239 Resolvase, N terminal domain M2J83_08790 PF00809 Pterin binding enzyme M2J83_08805 PF00893 Small Multidrug Resistance protein M2J83_08815 PF03466 LysR substrate binding domain M2J83_08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_08820 PF08267 Cobalamin-independent synthase, N-terminal domain M2J83_08820 PF01717 Cobalamin-independent synthase, Catalytic domain M2J83_08830 PF01717 Cobalamin-independent synthase, Catalytic domain M2J83_08840 PF18158 Adaptive response protein AidB N-terminal domain M2J83_08840 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_08840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_08850 PF08279 HTH domain M2J83_08850 PF13280 WYL domain M2J83_08855 PF07683 Cobalamin synthesis protein cobW C-terminal domain M2J83_08855 PF02492 CobW/HypB/UreG, nucleotide-binding domain M2J83_08860 PF02649 Type I GTP cyclohydrolase folE2 M2J83_08865 PF01809 Putative membrane protein insertion efficiency factor M2J83_08875 PF01979 Amidohydrolase family M2J83_08880 PF01475 Ferric uptake regulator family M2J83_08885 PF01502 Phosphoribosyl-AMP cyclohydrolase M2J83_08890 PF01970 Tripartite tricarboxylate transporter TctA family M2J83_08900 PF13426 PAS domain M2J83_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_08900 PF00512 His Kinase A (phospho-acceptor) domain M2J83_08900 PF08448 PAS fold M2J83_08900 PF00072 Response regulator receiver domain M2J83_08905 PF00072 Response regulator receiver domain M2J83_08905 PF00486 Transcriptional regulatory protein, C terminal M2J83_08910 PF12833 Helix-turn-helix domain M2J83_08910 PF12852 Cupin M2J83_08915 PF07690 Major Facilitator Superfamily M2J83_08920 PF08543 Phosphomethylpyrimidine kinase M2J83_08930 PF14552 Tautomerase enzyme M2J83_08935 PF00042 Globin M2J83_08935 PF00970 Oxidoreductase FAD-binding domain M2J83_08935 PF00175 Oxidoreductase NAD-binding domain M2J83_08945 PF03060 Nitronate monooxygenase M2J83_08950 PF03466 LysR substrate binding domain M2J83_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_08970 PF00440 Bacterial regulatory proteins, tetR family M2J83_08970 PF16859 Tetracyclin repressor-like, C-terminal domain M2J83_08975 PF03033 Glycosyltransferase family 28 N-terminal domain M2J83_08995 PF02798 Glutathione S-transferase, N-terminal domain M2J83_09000 PF00574 Clp protease M2J83_09025 PF00891 O-methyltransferase domain M2J83_09035 PF00899 ThiF family M2J83_09035 PF00581 Rhodanese-like domain M2J83_09040 PF14464 Prokaryotic homologs of the JAB domain M2J83_09045 PF02597 ThiS family M2J83_09050 PF02515 CoA-transferase family III M2J83_09055 PF13193 AMP-binding enzyme C-terminal domain M2J83_09055 PF00501 AMP-binding enzyme M2J83_09060 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_09060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_09060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_09085 PF01022 Bacterial regulatory protein, arsR family M2J83_09105 PF02311 AraC-like ligand binding domain M2J83_09105 PF12833 Helix-turn-helix domain M2J83_09110 PF00682 HMGL-like M2J83_09110 PF08502 LeuA allosteric (dimerisation) domain M2J83_09130 PF03466 LysR substrate binding domain M2J83_09130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_09135 PF13378 Enolase C-terminal domain-like M2J83_09135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M2J83_09140 PF04444 Catechol dioxygenase N terminus M2J83_09140 PF00775 Dioxygenase M2J83_09145 PF01144 Coenzyme A transferase M2J83_09150 PF01144 Coenzyme A transferase M2J83_09155 PF12146 Serine aminopeptidase, S33 M2J83_09160 PF02426 Muconolactone delta-isomerase M2J83_09165 PF03594 Benzoate membrane transport protein M2J83_09170 PF01926 50S ribosome-binding GTPase M2J83_09175 PF01926 50S ribosome-binding GTPase M2J83_09180 PF02535 ZIP Zinc transporter M2J83_09185 PF00005 ABC transporter M2J83_09190 PF00850 Histone deacetylase domain M2J83_09195 PF00196 Bacterial regulatory proteins, luxR family M2J83_09195 PF00072 Response regulator receiver domain M2J83_09200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M2J83_09200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M2J83_09225 PF12802 MarR family M2J83_09230 PF01494 FAD binding domain M2J83_09235 PF07690 Major Facilitator Superfamily M2J83_09245 PF01168 Alanine racemase, N-terminal domain M2J83_09250 PF00392 Bacterial regulatory proteins, gntR family M2J83_09250 PF00155 Aminotransferase class I and II M2J83_09255 PF00892 EamA-like transporter family M2J83_09265 PF08774 VRR-NUC domain M2J83_09265 PF18081 Fanconi anemia-associated nuclease SAP domain M2J83_09275 PF01266 FAD dependent oxidoreductase M2J83_09280 PF00890 FAD binding domain M2J83_09280 PF02910 Fumarate reductase flavoprotein C-term M2J83_09285 PF02445 Quinolinate synthetase A protein M2J83_09290 PF00248 Aldo/keto reductase family M2J83_09295 PF07969 Amidohydrolase family M2J83_09310 PF13356 Arm DNA-binding domain M2J83_09310 PF00589 Phage integrase family M2J83_09350 PF13356 Arm DNA-binding domain M2J83_09350 PF00589 Phage integrase family M2J83_09380 PF04381 Putative exonuclease, RdgC M2J83_09520 PF10668 Phage terminase small subunit M2J83_09520 PF03592 Terminase small subunit M2J83_09630 PF00959 Phage lysozyme M2J83_09670 PF03006 Haemolysin-III related M2J83_09675 PF07411 Domain of unknown function (DUF1508) M2J83_09695 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_09700 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_09705 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_09710 PF00005 ABC transporter M2J83_09730 PF02954 Bacterial regulatory protein, Fis family M2J83_09730 PF00158 Sigma-54 interaction domain M2J83_09730 PF02830 V4R domain M2J83_09730 PF06505 Activator of aromatic catabolism M2J83_09735 PF06099 Phenol hydroxylase subunit M2J83_09740 PF02332 Methane/Phenol/Toluene Hydroxylase M2J83_09745 PF02406 MmoB/DmpM family M2J83_09750 PF02332 Methane/Phenol/Toluene Hydroxylase M2J83_09750 PF04945 YHS domain M2J83_09755 PF04663 Phenol hydroxylase conserved region M2J83_09760 PF00970 Oxidoreductase FAD-binding domain M2J83_09760 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_09760 PF00175 Oxidoreductase NAD-binding domain M2J83_09765 PF03466 LysR substrate binding domain M2J83_09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_09770 PF00355 Rieske [2Fe-2S] domain M2J83_09770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M2J83_09775 PF00866 Ring hydroxylating beta subunit M2J83_09780 PF00970 Oxidoreductase FAD-binding domain M2J83_09780 PF00175 Oxidoreductase NAD-binding domain M2J83_09780 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_09785 PF00106 short chain dehydrogenase M2J83_09790 PF07690 Major Facilitator Superfamily M2J83_09800 PF01810 LysE type translocator M2J83_09810 PF00356 Bacterial regulatory proteins, lacI family M2J83_09820 PF01979 Amidohydrolase family M2J83_09825 PF00860 Permease family M2J83_09845 PF01145 SPFH domain / Band 7 family M2J83_09845 PF16200 C-terminal region of band_7 M2J83_09850 PF01957 NfeD-like C-terminal, partner-binding M2J83_09855 PF13649 Methyltransferase domain M2J83_09865 PF03891 Domain of unknown function (DUF333) M2J83_09875 PF00294 pfkB family carbohydrate kinase M2J83_09895 PF02824 TGS domain M2J83_09895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2J83_09895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2J83_09895 PF03129 Anticodon binding domain M2J83_09900 PF00707 Translation initiation factor IF-3, C-terminal domain M2J83_09900 PF05198 Translation initiation factor IF-3, N-terminal domain M2J83_09905 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M2J83_09905 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M2J83_09915 PF00381 PTS HPr component phosphorylation site M2J83_09920 PF00391 PEP-utilising enzyme, mobile domain M2J83_09920 PF05524 PEP-utilising enzyme, N-terminal M2J83_09920 PF02896 PEP-utilising enzyme, TIM barrel domain M2J83_09945 PF01078 Magnesium chelatase, subunit ChlI M2J83_09945 PF13335 Magnesium chelatase, subunit ChlI C-terminal M2J83_09950 PF01632 Ribosomal protein L35 M2J83_09955 PF00453 Ribosomal protein L20 M2J83_09960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M2J83_09960 PF01409 tRNA synthetases class II core domain (F) M2J83_09965 PF03484 tRNA synthetase B5 domain M2J83_09965 PF03483 B3/4 domain M2J83_09965 PF01588 Putative tRNA binding domain M2J83_09965 PF03147 Ferredoxin-fold anticodon binding domain M2J83_09965 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M2J83_09970 PF00216 Bacterial DNA-binding protein M2J83_09980 PF04305 Protein of unknown function (DUF455) M2J83_09990 PF00664 ABC transporter transmembrane region M2J83_09990 PF00005 ABC transporter M2J83_09995 PF02082 Transcriptional regulator M2J83_10000 PF01458 Uncharacterized protein family (UPF0051) M2J83_10005 PF00005 ABC transporter M2J83_10010 PF01458 Uncharacterized protein family (UPF0051) M2J83_10015 PF00266 Aminotransferase class-V M2J83_10020 PF01592 NifU-like N terminal domain M2J83_10025 PF01883 Iron-sulfur cluster assembly protein M2J83_10045 PF02321 Outer membrane efflux protein M2J83_10055 PF00664 ABC transporter transmembrane region M2J83_10055 PF00005 ABC transporter M2J83_10060 PF00529 HlyD membrane-fusion protein of T1SS M2J83_10080 PF01225 Mur ligase family, catalytic domain M2J83_10080 PF02875 Mur ligase family, glutamate ligase domain M2J83_10080 PF08245 Mur ligase middle domain M2J83_10085 PF08245 Mur ligase middle domain M2J83_10085 PF02875 Mur ligase family, glutamate ligase domain M2J83_10085 PF01225 Mur ligase family, catalytic domain M2J83_10090 PF07478 D-ala D-ala ligase C-terminus M2J83_10090 PF01820 D-ala D-ala ligase N-terminus M2J83_10095 PF01418 Helix-turn-helix domain, rpiR family M2J83_10095 PF01380 SIS domain M2J83_10100 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_10105 PF07687 Peptidase dimerisation domain M2J83_10105 PF01546 Peptidase family M20/M25/M40 M2J83_10110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2J83_10115 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_10120 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_10125 PF00005 ABC transporter M2J83_10125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2J83_10130 PF00795 Carbon-nitrogen hydrolase M2J83_10135 PF07687 Peptidase dimerisation domain M2J83_10135 PF01546 Peptidase family M20/M25/M40 M2J83_10140 PF07364 Metallopeptidase family M81 M2J83_10140 PF07171 MlrC C-terminus M2J83_10180 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_10185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_10190 PF00034 Cytochrome c M2J83_10190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_10195 PF01266 FAD dependent oxidoreductase M2J83_10210 PF03781 Sulfatase-modifying factor enzyme 1 M2J83_10225 PF02386 Cation transport protein M2J83_10230 PF02080 TrkA-C domain M2J83_10230 PF02254 TrkA-N domain M2J83_10235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M2J83_10245 PF09424 Yqey-like protein M2J83_10250 PF14579 Helix-hairpin-helix motif M2J83_10250 PF02811 PHP domain M2J83_10250 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2J83_10250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2J83_10285 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_10290 PF03466 LysR substrate binding domain M2J83_10295 PF00768 D-alanyl-D-alanine carboxypeptidase M2J83_10305 PF01618 MotA/TolQ/ExbB proton channel family M2J83_10310 PF13677 Membrane MotB of proton-channel complex MotA/MotB M2J83_10310 PF00691 OmpA family M2J83_10325 PF00296 Luciferase-like monooxygenase M2J83_10330 PF00106 short chain dehydrogenase M2J83_10340 PF00677 Lumazine binding domain M2J83_10350 PF01568 Molydopterin dinucleotide binding domain M2J83_10350 PF00384 Molybdopterin oxidoreductase M2J83_10350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M2J83_10355 PF03916 Polysulphide reductase, NrfD M2J83_10360 PF13247 4Fe-4S dicluster domain M2J83_10370 PF03743 Bacterial conjugation TrbI-like protein M2J83_10375 PF03524 Conjugal transfer protein M2J83_10385 PF04610 TrbL/VirB6 plasmid conjugal transfer protein M2J83_10400 PF03135 CagE, TrbE, VirB family, component of type IV transporter system M2J83_10410 PF04956 TrbC/VIRB2 family M2J83_10415 PF00437 Type II/IV secretion system protein M2J83_10425 PF02534 Type IV secretory system Conjugative DNA transfer M2J83_10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_10435 PF03466 LysR substrate binding domain M2J83_10440 PF02321 Outer membrane efflux protein M2J83_10445 PF00873 AcrB/AcrD/AcrF family M2J83_10450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_10470 PF00296 Luciferase-like monooxygenase M2J83_10480 PF01613 Flavin reductase like domain M2J83_10490 PF10502 Signal peptidase, peptidase S26 M2J83_10505 PF13614 AAA domain M2J83_10540 PF10137 Predicted nucleotide-binding protein containing TIR-like domain M2J83_10545 PF05284 Protein of unknown function (DUF736) M2J83_10555 PF02195 ParB-like nuclease domain M2J83_10560 PF06067 Domain of unknown function (DUF932) M2J83_10580 PF04002 RadC-like JAB domain M2J83_10590 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_10620 PF00145 C-5 cytosine-specific DNA methylase M2J83_10620 PF01381 Helix-turn-helix M2J83_10635 PF07715 TonB-dependent Receptor Plug Domain M2J83_10635 PF00593 TonB dependent receptor M2J83_10645 PF03069 Acetamidase/Formamidase family M2J83_10650 PF01979 Amidohydrolase family M2J83_10655 PF00860 Permease family M2J83_10660 PF00011 Hsp20/alpha crystallin family M2J83_10665 PF07687 Peptidase dimerisation domain M2J83_10665 PF01546 Peptidase family M20/M25/M40 M2J83_10695 PF01494 FAD binding domain M2J83_10705 PF00293 NUDIX domain M2J83_10705 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M2J83_10705 PF09297 NADH pyrophosphatase zinc ribbon domain M2J83_10710 PF08340 Domain of unknown function (DUF1732) M2J83_10710 PF03755 YicC-like family, N-terminal region M2J83_10715 PF00149 Calcineurin-like phosphoesterase M2J83_10720 PF13175 AAA ATPase domain M2J83_10725 PF01138 3' exoribonuclease family, domain 1 M2J83_10725 PF03725 3' exoribonuclease family, domain 2 M2J83_10730 PF01725 Ham1 family M2J83_10735 PF06969 HemN C-terminal domain M2J83_10735 PF04055 Radical SAM superfamily M2J83_10740 PF00120 Glutamine synthetase, catalytic domain M2J83_10740 PF03951 Glutamine synthetase, beta-Grasp domain M2J83_10745 PF13673 Acetyltransferase (GNAT) domain M2J83_10750 PF03466 LysR substrate binding domain M2J83_10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_10765 PF08402 TOBE domain M2J83_10765 PF00005 ABC transporter M2J83_10770 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_10780 PF00970 Oxidoreductase FAD-binding domain M2J83_10780 PF00175 Oxidoreductase NAD-binding domain M2J83_10785 PF01042 Endoribonuclease L-PSP M2J83_10790 PF17191 RecG wedge domain M2J83_10790 PF00270 DEAD/DEAH box helicase M2J83_10790 PF00271 Helicase conserved C-terminal domain M2J83_10795 PF03466 LysR substrate binding domain M2J83_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_10800 PF00210 Ferritin-like domain M2J83_10805 PF13458 Periplasmic binding protein M2J83_10810 PF00005 ABC transporter M2J83_10810 PF17912 MalK OB fold domain M2J83_10815 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_10820 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_10825 PF13416 Bacterial extracellular solute-binding protein M2J83_10830 PF03807 NADP oxidoreductase coenzyme F420-dependent M2J83_10830 PF14748 Pyrroline-5-carboxylate reductase dimerisation M2J83_10835 PF13458 Periplasmic binding protein M2J83_10840 PF02653 Branched-chain amino acid transport system / permease component M2J83_10845 PF02653 Branched-chain amino acid transport system / permease component M2J83_10845 PF11862 Domain of unknown function (DUF3382) M2J83_10850 PF00005 ABC transporter M2J83_10850 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2J83_10855 PF00005 ABC transporter M2J83_10860 PF02798 Glutathione S-transferase, N-terminal domain M2J83_10860 PF00043 Glutathione S-transferase, C-terminal domain M2J83_10865 PF00326 Prolyl oligopeptidase family M2J83_10870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2J83_10870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2J83_10880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M2J83_10880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M2J83_10885 PF00206 Lyase M2J83_10885 PF10415 Fumarase C C-terminus M2J83_10890 PF07995 Glucose / Sorbosone dehydrogenase M2J83_10895 PF08241 Methyltransferase domain M2J83_10900 PF00582 Universal stress protein family M2J83_10905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_10910 PF12833 Helix-turn-helix domain M2J83_10910 PF02311 AraC-like ligand binding domain M2J83_10925 PF00171 Aldehyde dehydrogenase family M2J83_10930 PF01494 FAD binding domain M2J83_10935 PF07690 Major Facilitator Superfamily M2J83_10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_10945 PF03466 LysR substrate binding domain M2J83_10955 PF00403 Heavy-metal-associated domain M2J83_10960 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ M2J83_10975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_10975 PF03466 LysR substrate binding domain M2J83_10980 PF02899 Phage integrase, N-terminal SAM-like domain M2J83_10980 PF00589 Phage integrase family M2J83_10995 PF00394 Multicopper oxidase M2J83_10995 PF07731 Multicopper oxidase M2J83_10995 PF07732 Multicopper oxidase M2J83_11000 PF02222 ATP-grasp domain M2J83_11010 PF03976 Polyphosphate kinase 2 (PPK2) M2J83_11170 PF13098 Thioredoxin-like domain M2J83_11170 PF10411 Disulfide bond isomerase protein N-terminus M2J83_11195 PF02796 Helix-turn-helix domain of resolvase M2J83_11195 PF00239 Resolvase, N terminal domain M2J83_11200 PF00717 Peptidase S24-like M2J83_11205 PF11798 IMS family HHH motif M2J83_11205 PF11799 impB/mucB/samB family C-terminal domain M2J83_11205 PF00817 impB/mucB/samB family M2J83_11205 PF13438 Domain of unknown function (DUF4113) M2J83_11210 PF00892 EamA-like transporter family M2J83_11215 PF07690 Major Facilitator Superfamily M2J83_11220 PF02909 Tetracyclin repressor-like, C-terminal domain M2J83_11220 PF00440 Bacterial regulatory proteins, tetR family M2J83_11235 PF07690 Major Facilitator Superfamily M2J83_11240 PF00440 Bacterial regulatory proteins, tetR family M2J83_11240 PF02909 Tetracyclin repressor-like, C-terminal domain M2J83_11265 PF00809 Pterin binding enzyme M2J83_11270 PF00893 Small Multidrug Resistance protein M2J83_11280 PF13495 Phage integrase, N-terminal SAM-like domain M2J83_11280 PF00589 Phage integrase family M2J83_11290 PF02463 RecF/RecN/SMC N terminal domain M2J83_11295 PF00580 UvrD/REP helicase N-terminal domain M2J83_11295 PF13361 UvrD-like helicase C-terminal domain M2J83_11320 PF04002 RadC-like JAB domain M2J83_11410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M2J83_11440 PF01292 Prokaryotic cytochrome b561 M2J83_11450 PF04264 YceI-like domain M2J83_11455 PF03960 ArsC family M2J83_11460 PF00043 Glutathione S-transferase, C-terminal domain M2J83_11460 PF02798 Glutathione S-transferase, N-terminal domain M2J83_11475 PF03358 NADPH-dependent FMN reductase M2J83_11485 PF01026 TatD related DNase M2J83_11490 PF09115 DNA polymerase III, delta subunit, C terminal M2J83_11500 PF02618 YceG-like family M2J83_11510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2J83_11510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2J83_11520 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_11520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_11520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_11525 PF03658 RnfH family Ubiquitin M2J83_11530 PF03364 Polyketide cyclase / dehydrase and lipid transport M2J83_11535 PF01668 SmpB protein M2J83_11540 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_11550 PF02896 PEP-utilising enzyme, TIM barrel domain M2J83_11550 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M2J83_11550 PF00391 PEP-utilising enzyme, mobile domain M2J83_11555 PF03618 Kinase/pyrophosphorylase M2J83_11560 PF01425 Amidase M2J83_11565 PF00588 SpoU rRNA Methylase family M2J83_11565 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2J83_11570 PF01351 Ribonuclease HII M2J83_11575 PF02684 Lipid-A-disaccharide synthetase M2J83_11580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M2J83_11580 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_11585 PF07977 FabA-like domain M2J83_11590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M2J83_11590 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_11595 PF03938 Outer membrane protein (OmpH-like) M2J83_11600 PF01103 Surface antigen M2J83_11600 PF07244 Surface antigen variable number repeat M2J83_11605 PF17820 PDZ domain M2J83_11605 PF02163 Peptidase family M50 M2J83_11605 PF13180 PDZ domain M2J83_11610 PF13288 DXP reductoisomerase C-terminal domain M2J83_11610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M2J83_11610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M2J83_11620 PF01255 Putative undecaprenyl diphosphate synthase M2J83_11625 PF01765 Ribosome recycling factor M2J83_11630 PF00696 Amino acid kinase family M2J83_11635 PF00889 Elongation factor TS M2J83_11640 PF00318 Ribosomal protein S2 M2J83_11645 PF00557 Metallopeptidase family M24 M2J83_11650 PF01909 Nucleotidyltransferase domain M2J83_11650 PF01966 HD domain M2J83_11650 PF08335 GlnD PII-uridylyltransferase M2J83_11655 PF01914 MarC family integral membrane protein M2J83_11665 PF00144 Beta-lactamase M2J83_11670 PF00156 Phosphoribosyl transferase domain M2J83_11675 PF02674 Colicin V production protein M2J83_11685 PF02875 Mur ligase family, glutamate ligase domain M2J83_11685 PF08245 Mur ligase middle domain M2J83_11690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2J83_11690 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_11695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2J83_11695 PF00364 Biotin-requiring enzyme M2J83_11695 PF02817 e3 binding domain M2J83_11700 PF17831 Pyruvate dehydrogenase E1 component middle domain M2J83_11700 PF00456 Transketolase, thiamine diphosphate binding domain M2J83_11705 PF00512 His Kinase A (phospho-acceptor) domain M2J83_11705 PF00989 PAS fold M2J83_11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_11710 PF00196 Bacterial regulatory proteins, luxR family M2J83_11710 PF00072 Response regulator receiver domain M2J83_11715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M2J83_11715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M2J83_11720 PF01432 Peptidase family M3 M2J83_11725 PF02630 SCO1/SenC M2J83_11730 PF03144 Elongation factor Tu domain 2 M2J83_11730 PF00009 Elongation factor Tu GTP binding domain M2J83_11730 PF03764 Elongation factor G, domain IV M2J83_11730 PF14492 Elongation Factor G, domain II M2J83_11730 PF00679 Elongation factor G C-terminus M2J83_11735 PF01022 Bacterial regulatory protein, arsR family M2J83_11740 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_11740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2J83_11745 PF00376 MerR family regulatory protein M2J83_11745 PF09278 MerR, DNA binding M2J83_11750 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_11755 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M2J83_11760 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_11765 PF01220 Dehydroquinase class II M2J83_11780 PF12697 Alpha/beta hydrolase family M2J83_11785 PF02515 CoA-transferase family III M2J83_11795 PF02803 Thiolase, C-terminal domain M2J83_11795 PF00108 Thiolase, N-terminal domain M2J83_11815 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M2J83_11820 PF02321 Outer membrane efflux protein M2J83_11825 PF00873 AcrB/AcrD/AcrF family M2J83_11830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_11830 PF00529 HlyD membrane-fusion protein of T1SS M2J83_11835 PF00005 ABC transporter M2J83_11855 PF02803 Thiolase, C-terminal domain M2J83_11855 PF00108 Thiolase, N-terminal domain M2J83_11860 PF02803 Thiolase, C-terminal domain M2J83_11860 PF00108 Thiolase, N-terminal domain M2J83_11880 PF03466 LysR substrate binding domain M2J83_11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_11885 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M2J83_11885 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M2J83_11885 PF01276 Orn/Lys/Arg decarboxylase, major domain M2J83_11905 PF00625 Guanylate kinase M2J83_11910 PF01192 RNA polymerase Rpb6 M2J83_11915 PF04607 Region found in RelA / SpoT proteins M2J83_11915 PF02824 TGS domain M2J83_11915 PF13291 ACT domain M2J83_11925 PF03591 AzlC protein M2J83_11930 PF01476 LysM domain M2J83_11930 PF08525 Opacity-associated protein A N-terminal motif M2J83_11930 PF01551 Peptidase family M23 M2J83_11935 PF00639 PPIC-type PPIASE domain M2J83_11935 PF09312 SurA N-terminal domain M2J83_11940 PF03009 Glycerophosphoryl diester phosphodiesterase family M2J83_11945 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M2J83_11950 PF00849 RNA pseudouridylate synthase M2J83_11950 PF01479 S4 domain M2J83_11955 PF04345 Chorismate lyase M2J83_11960 PF07690 Major Facilitator Superfamily M2J83_11965 PF00248 Aldo/keto reductase family M2J83_11970 PF00543 Nitrogen regulatory protein P-II M2J83_11975 PF00924 Mechanosensitive ion channel M2J83_11980 PF00206 Lyase M2J83_11980 PF14698 Argininosuccinate lyase C-terminal M2J83_11985 PF00480 ROK family M2J83_11990 PF01804 Penicillin amidase M2J83_11995 PF01266 FAD dependent oxidoreductase M2J83_12005 PF05958 tRNA (Uracil-5-)-methyltransferase M2J83_12010 PF01551 Peptidase family M23 M2J83_12010 PF01476 LysM domain M2J83_12020 PF01975 Survival protein SurE M2J83_12025 PF02660 Glycerol-3-phosphate acyltransferase M2J83_12030 PF00814 Glycoprotease family M2J83_12035 PF00860 Permease family M2J83_12040 PF00085 Thioredoxin M2J83_12055 PF01205 Uncharacterized protein family UPF0029 M2J83_12060 PF12848 ABC transporter M2J83_12060 PF00005 ABC transporter M2J83_12065 PF17676 LD-carboxypeptidase C-terminal domain M2J83_12065 PF02016 LD-carboxypeptidase N-terminal domain M2J83_12070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2J83_12075 PF00005 ABC transporter M2J83_12080 PF01061 ABC-2 type transporter M2J83_12090 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M2J83_12090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_12095 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M2J83_12100 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_12105 PF01266 FAD dependent oxidoreductase M2J83_12115 PF05690 Thiazole biosynthesis protein ThiG M2J83_12120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2J83_12120 PF00205 Thiamine pyrophosphate enzyme, central domain M2J83_12120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2J83_12125 PF12556 Cobaltochelatase CobS subunit N terminal M2J83_12125 PF08406 CbbQ/NirQ/NorQ C-terminal M2J83_12125 PF07728 AAA domain (dynein-related subfamily) M2J83_12135 PF01614 Bacterial transcriptional regulator M2J83_12135 PF09339 IclR helix-turn-helix domain M2J83_12140 PF01515 Phosphate acetyl/butaryl transferase M2J83_12145 PF01925 Sulfite exporter TauE/SafE M2J83_12155 PF04461 Protein of unknown function (DUF520) M2J83_12160 PF00501 AMP-binding enzyme M2J83_12160 PF13193 AMP-binding enzyme C-terminal domain M2J83_12165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M2J83_12170 PF02540 NAD synthase M2J83_12170 PF00958 GMP synthase C terminal domain M2J83_12170 PF00117 Glutamine amidotransferase class-I M2J83_12175 PF12833 Helix-turn-helix domain M2J83_12180 PF13593 SBF-like CPA transporter family (DUF4137) M2J83_12185 PF08534 Redoxin M2J83_12190 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M2J83_12195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_12205 PF01416 tRNA pseudouridine synthase M2J83_12215 PF01118 Semialdehyde dehydrogenase, NAD binding domain M2J83_12215 PF02774 Semialdehyde dehydrogenase, dimerisation domain M2J83_12220 PF00180 Isocitrate/isopropylmalate dehydrogenase M2J83_12225 PF00694 Aconitase C-terminal domain M2J83_12230 PF00330 Aconitase family (aconitate hydratase) M2J83_12235 PF00155 Aminotransferase class I and II M2J83_12235 PF00392 Bacterial regulatory proteins, gntR family M2J83_12240 PF02627 Carboxymuconolactone decarboxylase family M2J83_12250 PF00196 Bacterial regulatory proteins, luxR family M2J83_12250 PF00072 Response regulator receiver domain M2J83_12255 PF00072 Response regulator receiver domain M2J83_12255 PF13426 PAS domain M2J83_12255 PF08448 PAS fold M2J83_12255 PF00512 His Kinase A (phospho-acceptor) domain M2J83_12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_12265 PF01264 Chorismate synthase M2J83_12270 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M2J83_12280 PF03631 Virulence factor BrkB M2J83_12290 PF01207 Dihydrouridine synthase (Dus) M2J83_12300 PF01636 Phosphotransferase enzyme family M2J83_12320 PF00437 Type II/IV secretion system protein M2J83_12325 PF13629 Pilus formation protein N terminal region M2J83_12325 PF00263 Bacterial type II and III secretion system protein M2J83_12325 PF04972 BON domain M2J83_12355 PF07715 TonB-dependent Receptor Plug Domain M2J83_12355 PF07660 Secretin and TonB N terminus short domain M2J83_12355 PF00593 TonB dependent receptor M2J83_12365 PF04542 Sigma-70 region 2 M2J83_12365 PF08281 Sigma-70, region 4 M2J83_12370 PF01557 Fumarylacetoacetate (FAA) hydrolase family M2J83_12375 PF00719 Inorganic pyrophosphatase M2J83_12385 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M2J83_12395 PF03900 Porphobilinogen deaminase, C-terminal domain M2J83_12395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M2J83_12400 PF03741 Integral membrane protein TerC family M2J83_12410 PF02629 CoA binding domain M2J83_12410 PF00549 CoA-ligase M2J83_12415 PF00549 CoA-ligase M2J83_12415 PF08442 ATP-grasp domain M2J83_12425 PF01717 Cobalamin-independent synthase, Catalytic domain M2J83_12425 PF08267 Cobalamin-independent synthase, N-terminal domain M2J83_12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_12430 PF03466 LysR substrate binding domain M2J83_12435 PF02631 RecX family M2J83_12440 PF00154 recA bacterial DNA recombination protein M2J83_12445 PF00486 Transcriptional regulatory protein, C terminal M2J83_12445 PF00072 Response regulator receiver domain M2J83_12450 PF00512 His Kinase A (phospho-acceptor) domain M2J83_12450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_12455 PF00083 Sugar (and other) transporter M2J83_12455 PF07690 Major Facilitator Superfamily M2J83_12460 PF04381 Putative exonuclease, RdgC M2J83_12470 PF00501 AMP-binding enzyme M2J83_12470 PF13193 AMP-binding enzyme C-terminal domain M2J83_12475 PF00378 Enoyl-CoA hydratase/isomerase M2J83_12480 PF04341 Protein of unknown function, DUF485 M2J83_12485 PF00474 Sodium:solute symporter family M2J83_12490 PF00171 Aldehyde dehydrogenase family M2J83_12495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M2J83_12495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M2J83_12510 PF00905 Penicillin binding protein transpeptidase domain M2J83_12510 PF00912 Transglycosylase M2J83_12515 PF00207 Alpha-2-macroglobulin family M2J83_12515 PF07703 Alpha-2-macroglobulin bait region domain M2J83_12515 PF01835 MG2 domain M2J83_12525 PF03060 Nitronate monooxygenase M2J83_12530 PF04055 Radical SAM superfamily M2J83_12530 PF06969 HemN C-terminal domain M2J83_12535 PF13244 Domain of unknown function (DUF4040) M2J83_12535 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M2J83_12535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M2J83_12535 PF00361 Proton-conducting membrane transporter M2J83_12540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M2J83_12545 PF00361 Proton-conducting membrane transporter M2J83_12555 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M2J83_12570 PF02705 K+ potassium transporter M2J83_12575 PF08521 Two-component sensor kinase N-terminal M2J83_12575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_12575 PF00512 His Kinase A (phospho-acceptor) domain M2J83_12580 PF00072 Response regulator receiver domain M2J83_12580 PF00486 Transcriptional regulatory protein, C terminal M2J83_12585 PF02472 Biopolymer transport protein ExbD/TolR M2J83_12590 PF01618 MotA/TolQ/ExbB proton channel family M2J83_12600 PF12857 TOBE-like domain M2J83_12600 PF00005 ABC transporter M2J83_12605 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_12610 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_12630 PF12706 Beta-lactamase superfamily domain M2J83_12635 PF00313 'Cold-shock' DNA-binding domain M2J83_12645 PF00216 Bacterial DNA-binding protein M2J83_12650 PF10414 Sirohaem synthase dimerisation region M2J83_12650 PF14824 Sirohaem biosynthesis protein central M2J83_12650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2J83_12655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_12665 PF13404 AsnC-type helix-turn-helix domain M2J83_12665 PF17805 AsnC-like ligand binding domain M2J83_12670 PF13404 AsnC-type helix-turn-helix domain M2J83_12670 PF17805 AsnC-like ligand binding domain M2J83_12675 PF17805 AsnC-like ligand binding domain M2J83_12675 PF13404 AsnC-type helix-turn-helix domain M2J83_12680 PF04055 Radical SAM superfamily M2J83_12680 PF13186 Iron-sulfur cluster-binding domain M2J83_12685 PF10414 Sirohaem synthase dimerisation region M2J83_12685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2J83_12685 PF14824 Sirohaem biosynthesis protein central M2J83_12690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_12695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_12700 PF00392 Bacterial regulatory proteins, gntR family M2J83_12700 PF00155 Aminotransferase class I and II M2J83_12705 PF01053 Cys/Met metabolism PLP-dependent enzyme M2J83_12710 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2J83_12710 PF00588 SpoU rRNA Methylase family M2J83_12715 PF00773 RNB domain M2J83_12715 PF08206 Ribonuclease B OB domain M2J83_12715 PF17876 Cold shock domain M2J83_12715 PF00575 S1 RNA binding domain M2J83_12715 PF08461 Ribonuclease R winged-helix domain M2J83_12730 PF00356 Bacterial regulatory proteins, lacI family M2J83_12735 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_12740 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_12745 PF00005 ABC transporter M2J83_12760 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain M2J83_12760 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain M2J83_12765 PF17042 Nucleotide-binding C-terminal domain M2J83_12765 PF07005 Sugar-binding N-terminal domain M2J83_12780 PF04954 Siderophore-interacting protein M2J83_12780 PF08021 Siderophore-interacting FAD-binding domain M2J83_12795 PF01494 FAD binding domain M2J83_12800 PF06750 Bacterial Peptidase A24 N-terminal domain M2J83_12800 PF01478 Type IV leader peptidase family M2J83_12810 PF03466 LysR substrate binding domain M2J83_12810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_12815 PF08402 TOBE domain M2J83_12815 PF00005 ABC transporter M2J83_12820 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_12825 PF13419 Haloacid dehalogenase-like hydrolase M2J83_12835 PF01266 FAD dependent oxidoreductase M2J83_12850 PF01738 Dienelactone hydrolase family M2J83_12855 PF12843 Putative quorum-sensing-regulated virulence factor M2J83_12860 PF02798 Glutathione S-transferase, N-terminal domain M2J83_12865 PF02678 Pirin M2J83_12865 PF05726 Pirin C-terminal cupin domain M2J83_12875 PF00795 Carbon-nitrogen hydrolase M2J83_12880 PF07690 Major Facilitator Superfamily M2J83_12885 PF07690 Major Facilitator Superfamily M2J83_12890 PF12833 Helix-turn-helix domain M2J83_12890 PF02311 AraC-like ligand binding domain M2J83_12895 PF03594 Benzoate membrane transport protein M2J83_12905 PF03746 LamB/YcsF family M2J83_12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_12910 PF03466 LysR substrate binding domain M2J83_12915 PF01799 [2Fe-2S] binding domain M2J83_12915 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_12920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M2J83_12920 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M2J83_12930 PF01979 Amidohydrolase family M2J83_12935 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M2J83_12940 PF00486 Transcriptional regulatory protein, C terminal M2J83_12940 PF00072 Response regulator receiver domain M2J83_12945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_12945 PF00512 His Kinase A (phospho-acceptor) domain M2J83_12945 PF00672 HAMP domain M2J83_12950 PF04542 Sigma-70 region 2 M2J83_12950 PF04545 Sigma-70, region 4 M2J83_12950 PF04546 Sigma-70, non-essential region M2J83_12950 PF04539 Sigma-70 region 3 M2J83_12950 PF03979 Sigma-70 factor, region 1.1 M2J83_12950 PF00140 Sigma-70 factor, region 1.2 M2J83_12955 PF01807 CHC2 zinc finger M2J83_12955 PF08275 DNA primase catalytic core, N-terminal domain M2J83_12955 PF10410 DnaB-helicase binding domain of primase M2J83_12955 PF08278 DNA primase DnaG DnaB-binding M2J83_12960 PF01165 Ribosomal protein S21 M2J83_12965 PF00156 Phosphoribosyl transferase domain M2J83_12970 PF00709 Adenylosuccinate synthetase M2J83_12975 PF13393 Histidyl-tRNA synthetase M2J83_12980 PF01145 SPFH domain / Band 7 family M2J83_12985 PF01145 SPFH domain / Band 7 family M2J83_12985 PF12221 Bacterial membrane protein N terminal M2J83_12990 PF16360 GTP-binding GTPase Middle Region M2J83_12990 PF01926 50S ribosome-binding GTPase M2J83_12990 PF13167 GTP-binding GTPase N-terminal M2J83_12995 PF17209 Hfq protein M2J83_13000 PF00155 Aminotransferase class I and II M2J83_13005 PF01926 50S ribosome-binding GTPase M2J83_13005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M2J83_13010 PF13360 PQQ-like domain M2J83_13015 PF09976 Tetratricopeptide repeat-like domain M2J83_13020 PF13393 Histidyl-tRNA synthetase M2J83_13020 PF03129 Anticodon binding domain M2J83_13025 PF04551 GcpE protein M2J83_13035 PF04055 Radical SAM superfamily M2J83_13040 PF00334 Nucleoside diphosphate kinase M2J83_13045 PF10458 Valyl tRNA synthetase tRNA binding arm M2J83_13045 PF00133 tRNA synthetases class I (I, L, M and V) M2J83_13045 PF08264 Anticodon-binding domain of tRNA M2J83_13050 PF01746 tRNA (Guanine-1)-methyltransferase M2J83_13055 PF01782 RimM N-terminal domain M2J83_13060 PF00886 Ribosomal protein S16 M2J83_13065 PF01206 Sulfurtransferase TusA M2J83_13070 PF01411 tRNA synthetases class II (A) M2J83_13070 PF02272 DHHA1 domain M2J83_13070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2J83_13085 PF00576 HIUase/Transthyretin family M2J83_13115 PF13416 Bacterial extracellular solute-binding protein M2J83_13120 PF01266 FAD dependent oxidoreductase M2J83_13125 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_13125 PF00175 Oxidoreductase NAD-binding domain M2J83_13125 PF00970 Oxidoreductase FAD-binding domain M2J83_13130 PF00521 DNA gyrase/topoisomerase IV, subunit A M2J83_13135 PF01751 Toprim domain M2J83_13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_13135 PF00986 DNA gyrase B subunit, carboxyl terminus M2J83_13135 PF00204 DNA gyrase B M2J83_13140 PF00085 Thioredoxin M2J83_13145 PF07498 Rho termination factor, N-terminal domain M2J83_13145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2J83_13145 PF07497 Rho termination factor, RNA-binding domain M2J83_13150 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M2J83_13150 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M2J83_13160 PF00866 Ring hydroxylating beta subunit M2J83_13165 PF00355 Rieske [2Fe-2S] domain M2J83_13165 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M2J83_13170 PF00005 ABC transporter M2J83_13170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2J83_13175 PF12911 N-terminal TM domain of oligopeptide transport permease C M2J83_13175 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_13180 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_13185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2J83_13195 PF00392 Bacterial regulatory proteins, gntR family M2J83_13195 PF07729 FCD domain M2J83_13210 PF08335 GlnD PII-uridylyltransferase M2J83_13210 PF03710 Glutamate-ammonia ligase adenylyltransferase M2J83_13215 PF02677 Epoxyqueuosine reductase QueH M2J83_13220 PF10431 C-terminal, D2-small domain, of ClpB protein M2J83_13220 PF02861 Clp amino terminal domain, pathogenicity island component M2J83_13220 PF17871 AAA lid domain M2J83_13220 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_13220 PF07724 AAA domain (Cdc48 subfamily) M2J83_13225 PF13545 Crp-like helix-turn-helix domain M2J83_13225 PF00027 Cyclic nucleotide-binding domain M2J83_13240 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M2J83_13240 PF13746 4Fe-4S dicluster domain M2J83_13240 PF12801 4Fe-4S binding domain M2J83_13245 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_13245 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP M2J83_13260 PF00115 Cytochrome C and Quinol oxidase polypeptide I M2J83_13270 PF00403 Heavy-metal-associated domain M2J83_13275 PF00463 Isocitrate lyase family M2J83_13280 PF14489 QueF-like protein M2J83_13280 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M2J83_13290 PF01066 CDP-alcohol phosphatidyltransferase M2J83_13295 PF01541 GIY-YIG catalytic domain M2J83_13295 PF02151 UvrB/uvrC motif M2J83_13295 PF08459 UvrC Helix-hairpin-helix N-terminal M2J83_13300 PF00933 Glycosyl hydrolase family 3 N terminal domain M2J83_13305 PF01648 4'-phosphopantetheinyl transferase superfamily M2J83_13310 PF14535 AMP-binding enzyme C-terminal domain M2J83_13310 PF00501 AMP-binding enzyme M2J83_13315 PF03061 Thioesterase superfamily M2J83_13320 PF00378 Enoyl-CoA hydratase/isomerase M2J83_13325 PF00171 Aldehyde dehydrogenase family M2J83_13330 PF00970 Oxidoreductase FAD-binding domain M2J83_13330 PF00175 Oxidoreductase NAD-binding domain M2J83_13330 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_13335 PF01883 Iron-sulfur cluster assembly protein M2J83_13340 PF05138 Phenylacetic acid catabolic protein M2J83_13345 PF06243 Phenylacetic acid degradation B M2J83_13350 PF05138 Phenylacetic acid catabolic protein M2J83_13355 PF00929 Exonuclease M2J83_13360 PF01435 Peptidase family M48 M2J83_13360 PF16491 CAAX prenyl protease N-terminal, five membrane helices M2J83_13365 PF03193 RsgA GTPase M2J83_13375 PF01245 Ribosomal protein L19 M2J83_13385 PF03099 Biotin/lipoate A/B protein ligase family M2J83_13385 PF10437 Bacterial lipoate protein ligase C-terminus M2J83_13395 PF10417 C-terminal domain of 1-Cys peroxiredoxin M2J83_13395 PF00578 AhpC/TSA family M2J83_13400 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_13400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_13400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_13400 PF12806 Acetyl-CoA dehydrogenase C-terminal like M2J83_13405 PF01012 Electron transfer flavoprotein domain M2J83_13405 PF00766 Electron transfer flavoprotein FAD-binding domain M2J83_13410 PF01012 Electron transfer flavoprotein domain M2J83_13415 PF00850 Histone deacetylase domain M2J83_13420 PF13406 Transglycosylase SLT domain M2J83_13425 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_13430 PF10531 SLBB domain M2J83_13435 PF01370 NAD dependent epimerase/dehydratase family M2J83_13440 PF00294 pfkB family carbohydrate kinase M2J83_13445 PF18073 Rubredoxin metal binding domain M2J83_13455 PF00216 Bacterial DNA-binding protein M2J83_13460 PF00575 S1 RNA binding domain M2J83_13465 PF02224 Cytidylate kinase M2J83_13470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2J83_13475 PF02153 Prephenate dehydrogenase M2J83_13480 PF01842 ACT domain M2J83_13480 PF01817 Chorismate mutase type II M2J83_13480 PF00800 Prephenate dehydratase M2J83_13485 PF00266 Aminotransferase class-V M2J83_13490 PF03989 DNA gyrase C-terminal domain, beta-propeller M2J83_13490 PF00521 DNA gyrase/topoisomerase IV, subunit A M2J83_13495 PF00691 OmpA family M2J83_13505 PF13419 Haloacid dehalogenase-like hydrolase M2J83_13510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_13510 PF03466 LysR substrate binding domain M2J83_13515 PF07690 Major Facilitator Superfamily M2J83_13520 PF00037 4Fe-4S binding domain M2J83_13520 PF11953 Domain of unknown function (DUF3470) M2J83_13530 PF07715 TonB-dependent Receptor Plug Domain M2J83_13530 PF00593 TonB dependent receptor M2J83_13545 PF00199 Catalase M2J83_13545 PF18011 C-terminal domain found in long catalases M2J83_13545 PF06628 Catalase-related immune-responsive M2J83_13555 PF08713 DNA alkylation repair enzyme M2J83_13565 PF00155 Aminotransferase class I and II M2J83_13570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_13570 PF03466 LysR substrate binding domain M2J83_13575 PF01042 Endoribonuclease L-PSP M2J83_13580 PF00440 Bacterial regulatory proteins, tetR family M2J83_13590 PF00005 ABC transporter M2J83_13590 PF16326 ABC transporter C-terminal domain M2J83_13590 PF12848 ABC transporter M2J83_13600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2J83_13610 PF01810 LysE type translocator M2J83_13615 PF03466 LysR substrate binding domain M2J83_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_13620 PF00392 Bacterial regulatory proteins, gntR family M2J83_13620 PF00155 Aminotransferase class I and II M2J83_13645 PF00043 Glutathione S-transferase, C-terminal domain M2J83_13645 PF02798 Glutathione S-transferase, N-terminal domain M2J83_13655 PF00375 Sodium:dicarboxylate symporter family M2J83_13660 PF01810 LysE type translocator M2J83_13680 PF00474 Sodium:solute symporter family M2J83_13685 PF00196 Bacterial regulatory proteins, luxR family M2J83_13685 PF00072 Response regulator receiver domain M2J83_13690 PF16736 Single Cache-like M2J83_13690 PF00989 PAS fold M2J83_13690 PF00512 His Kinase A (phospho-acceptor) domain M2J83_13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_13695 PF01747 ATP-sulfurylase M2J83_13695 PF14306 PUA-like domain M2J83_13700 PF17284 Spermidine synthase tetramerisation domain M2J83_13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_13705 PF00512 His Kinase A (phospho-acceptor) domain M2J83_13710 PF00486 Transcriptional regulatory protein, C terminal M2J83_13710 PF00072 Response regulator receiver domain M2J83_13715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M2J83_13715 PF08447 PAS fold M2J83_13720 PF01169 Uncharacterized protein family UPF0016 M2J83_13730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_13730 PF03466 LysR substrate binding domain M2J83_13735 PF02525 Flavodoxin-like fold M2J83_13740 PF00925 GTP cyclohydrolase II M2J83_13755 PF03109 ABC1 family M2J83_13760 PF04228 Putative neutral zinc metallopeptidase M2J83_13780 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M2J83_13785 PF01047 MarR family M2J83_13790 PF00543 Nitrogen regulatory protein P-II M2J83_13795 PF00909 Ammonium Transporter Family M2J83_13800 PF01322 Cytochrome C' M2J83_13805 PF08328 Adenylosuccinate lyase C-terminal M2J83_13805 PF00206 Lyase M2J83_13810 PF00043 Glutathione S-transferase, C-terminal domain M2J83_13810 PF13417 Glutathione S-transferase, N-terminal domain M2J83_13820 PF07859 alpha/beta hydrolase fold M2J83_13835 PF01925 Sulfite exporter TauE/SafE M2J83_13845 PF02913 FAD linked oxidases, C-terminal domain M2J83_13845 PF01565 FAD binding domain M2J83_13850 PF00793 DAHP synthetase I family M2J83_13855 PF04328 Selenoprotein, putative M2J83_13860 PF02554 Carbon starvation protein CstA M2J83_13860 PF13722 5TM C-terminal transporter carbon starvation CstA M2J83_13865 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_13870 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_13875 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_13880 PF00005 ABC transporter M2J83_13885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2J83_13885 PF00205 Thiamine pyrophosphate enzyme, central domain M2J83_13885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2J83_13890 PF00171 Aldehyde dehydrogenase family M2J83_13895 PF03447 Homoserine dehydrogenase, NAD binding domain M2J83_13895 PF01958 Domain of unknown function DUF108 M2J83_13905 PF12697 Alpha/beta hydrolase family M2J83_13910 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_13915 PF00005 ABC transporter M2J83_13930 PF13609 Gram-negative porin M2J83_13935 PF01614 Bacterial transcriptional regulator M2J83_13935 PF09339 IclR helix-turn-helix domain M2J83_13945 PF05721 Phytanoyl-CoA dioxygenase (PhyH) M2J83_13950 PF06339 Ectoine synthase M2J83_13955 PF00202 Aminotransferase class-III M2J83_13960 PF00583 Acetyltransferase (GNAT) family M2J83_13965 PF01047 MarR family M2J83_13970 PF00892 EamA-like transporter family M2J83_13975 PF01523 Putative modulator of DNA gyrase M2J83_13980 PF00816 H-NS histone family M2J83_13990 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M2J83_13990 PF01433 Peptidase family M1 domain M2J83_13990 PF11940 Domain of unknown function (DUF3458) Ig-like fold M2J83_13995 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M2J83_14000 PF00107 Zinc-binding dehydrogenase M2J83_14000 PF08240 Alcohol dehydrogenase GroES-like domain M2J83_14010 PF00180 Isocitrate/isopropylmalate dehydrogenase M2J83_14015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2J83_14020 PF05872 Bacterial protein of unknown function (DUF853) M2J83_14025 PF01709 Transcriptional regulator M2J83_14030 PF02844 Phosphoribosylglycinamide synthetase, N domain M2J83_14030 PF02843 Phosphoribosylglycinamide synthetase, C domain M2J83_14030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M2J83_14035 PF01218 Coproporphyrinogen III oxidase M2J83_14040 PF01467 Cytidylyltransferase-like M2J83_14050 PF02590 Predicted SPOUT methyltransferase M2J83_14055 PF02545 Maf-like protein M2J83_14060 PF13098 Thioredoxin-like domain M2J83_14075 PF01253 Translation initiation factor SUI1 M2J83_14085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2J83_14085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2J83_14090 PF14497 Glutathione S-transferase, C-terminal domain M2J83_14090 PF02798 Glutathione S-transferase, N-terminal domain M2J83_14095 PF02401 LytB protein M2J83_14100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M2J83_14105 PF04002 RadC-like JAB domain M2J83_14110 PF01418 Helix-turn-helix domain, rpiR family M2J83_14110 PF01380 SIS domain M2J83_14115 PF00083 Sugar (and other) transporter M2J83_14125 PF07690 Major Facilitator Superfamily M2J83_14130 PF01197 Ribosomal protein L31 M2J83_14140 PF01554 MatE M2J83_14145 PF00571 CBS domain M2J83_14145 PF00005 ABC transporter M2J83_14150 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_14165 PF07690 Major Facilitator Superfamily M2J83_14170 PF00830 Ribosomal L28 family M2J83_14175 PF00471 Ribosomal protein L33 M2J83_14180 PF08264 Anticodon-binding domain of tRNA M2J83_14180 PF00133 tRNA synthetases class I (I, L, M and V) M2J83_14180 PF13603 Leucyl-tRNA synthetase, Domain 2 M2J83_14180 PF09334 tRNA synthetases class I (M) M2J83_14190 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M2J83_14190 PF06144 DNA polymerase III, delta subunit M2J83_14195 PF00171 Aldehyde dehydrogenase family M2J83_14200 PF03653 Uncharacterised protein family (UPF0093) M2J83_14205 PF02926 THUMP domain M2J83_14205 PF01170 Putative RNA methylase family UPF0020 M2J83_14215 PF01430 Hsp33 protein M2J83_14225 PF04977 Septum formation initiator M2J83_14230 PF00113 Enolase, C-terminal TIM barrel domain M2J83_14230 PF03952 Enolase, N-terminal domain M2J83_14240 PF07690 Major Facilitator Superfamily M2J83_14255 PF00793 DAHP synthetase I family M2J83_14260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2J83_14265 PF06418 CTP synthase N-terminus M2J83_14265 PF00117 Glutamine amidotransferase class-I M2J83_14270 PF01321 Creatinase/Prolidase N-terminal domain M2J83_14270 PF00557 Metallopeptidase family M24 M2J83_14275 PF01144 Coenzyme A transferase M2J83_14280 PF01144 Coenzyme A transferase M2J83_14295 PF00892 EamA-like transporter family M2J83_14300 PF16177 Acetyl-coenzyme A synthetase N-terminus M2J83_14300 PF13193 AMP-binding enzyme C-terminal domain M2J83_14300 PF00501 AMP-binding enzyme M2J83_14310 PF00877 NlpC/P60 family M2J83_14320 PF03466 LysR substrate binding domain M2J83_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_14325 PF00171 Aldehyde dehydrogenase family M2J83_14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_14330 PF03466 LysR substrate binding domain M2J83_14340 PF00883 Cytosol aminopeptidase family, catalytic domain M2J83_14340 PF02789 Cytosol aminopeptidase family, N-terminal domain M2J83_14350 PF01027 Inhibitor of apoptosis-promoting Bax1 M2J83_14355 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_14370 PF11967 Recombination protein O N terminal M2J83_14370 PF02565 Recombination protein O C terminal M2J83_14375 PF07650 KH domain M2J83_14375 PF01926 50S ribosome-binding GTPase M2J83_14380 PF14622 Ribonuclease-III-like M2J83_14380 PF00035 Double-stranded RNA binding motif M2J83_14385 PF10502 Signal peptidase, peptidase S26 M2J83_14390 PF00009 Elongation factor Tu GTP binding domain M2J83_14390 PF00679 Elongation factor G C-terminus M2J83_14390 PF06421 GTP-binding protein LepA C-terminus M2J83_14390 PF03144 Elongation factor Tu domain 2 M2J83_14395 PF13180 PDZ domain M2J83_14410 PF04542 Sigma-70 region 2 M2J83_14410 PF08281 Sigma-70, region 4 M2J83_14415 PF00109 Beta-ketoacyl synthase, N-terminal domain M2J83_14415 PF02801 Beta-ketoacyl synthase, C-terminal domain M2J83_14420 PF00550 Phosphopantetheine attachment site M2J83_14430 PF00698 Acyl transferase domain M2J83_14435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M2J83_14435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M2J83_14440 PF02504 Fatty acid synthesis protein M2J83_14445 PF01783 Ribosomal L32p protein family M2J83_14450 PF02620 Large ribosomal RNA subunit accumulation protein YceD M2J83_14455 PF02545 Maf-like protein M2J83_14460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2J83_14465 PF01510 N-acetylmuramoyl-L-alanine amidase M2J83_14470 PF01794 Ferric reductase like transmembrane component M2J83_14475 PF00174 Oxidoreductase molybdopterin binding domain M2J83_14480 PF13419 Haloacid dehalogenase-like hydrolase M2J83_14485 PF01479 S4 domain M2J83_14485 PF00849 RNA pseudouridylate synthase M2J83_14490 PF00575 S1 RNA binding domain M2J83_14490 PF10150 Ribonuclease E/G family M2J83_14490 PF12111 Polyribonucleotide phosphorylase C terminal M2J83_14495 PF17848 Acetyl-coA carboxylase zinc finger domain M2J83_14495 PF01039 Carboxyl transferase domain M2J83_14500 PF00290 Tryptophan synthase alpha chain M2J83_14505 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_14510 PF13291 ACT domain M2J83_14510 PF04607 Region found in RelA / SpoT proteins M2J83_14510 PF02824 TGS domain M2J83_14520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M2J83_14520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M2J83_14525 PF11953 Domain of unknown function (DUF3470) M2J83_14525 PF00037 4Fe-4S binding domain M2J83_14535 PF04060 Putative Fe-S cluster M2J83_14540 PF10576 Iron-sulfur binding domain of endonuclease III M2J83_14540 PF00633 Helix-hairpin-helix motif M2J83_14540 PF00730 HhH-GPD superfamily base excision DNA repair protein M2J83_14545 PF00664 ABC transporter transmembrane region M2J83_14545 PF00005 ABC transporter M2J83_14550 PF03922 OmpW family M2J83_14555 PF00005 ABC transporter M2J83_14560 PF00005 ABC transporter M2J83_14560 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2J83_14575 PF01641 SelR domain M2J83_14580 PF04279 Intracellular septation protein A M2J83_14595 PF01653 NAD-dependent DNA ligase adenylation domain M2J83_14595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M2J83_14595 PF03120 NAD-dependent DNA ligase OB-fold domain M2J83_14595 PF00533 BRCA1 C Terminus (BRCT) domain M2J83_14595 PF12826 Helix-hairpin-helix motif M2J83_14605 PF02463 RecF/RecN/SMC N terminal domain M2J83_14605 PF06470 SMC proteins Flexible Hinge Domain M2J83_14610 PF07690 Major Facilitator Superfamily M2J83_14615 PF03167 Uracil DNA glycosylase superfamily M2J83_14620 PF00814 Glycoprotease family M2J83_14625 PF00072 Response regulator receiver domain M2J83_14625 PF00486 Transcriptional regulatory protein, C terminal M2J83_14630 PF00672 HAMP domain M2J83_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_14630 PF00512 His Kinase A (phospho-acceptor) domain M2J83_14635 PF02542 YgbB family M2J83_14640 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M2J83_14645 PF00271 Helicase conserved C-terminal domain M2J83_14645 PF02559 CarD-like/TRCF domain M2J83_14645 PF03461 TRCF domain M2J83_14645 PF00270 DEAD/DEAH box helicase M2J83_14645 PF17757 UvrB interaction domain M2J83_14655 PF03060 Nitronate monooxygenase M2J83_14665 PF00361 Proton-conducting membrane transporter M2J83_14670 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus M2J83_14670 PF00361 Proton-conducting membrane transporter M2J83_14675 PF00361 Proton-conducting membrane transporter M2J83_14675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M2J83_14680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M2J83_14685 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M2J83_14690 PF12838 4Fe-4S dicluster domain M2J83_14695 PF00146 NADH dehydrogenase M2J83_14700 PF00384 Molybdopterin oxidoreductase M2J83_14700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M2J83_14700 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal M2J83_14705 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M2J83_14705 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M2J83_14705 PF10531 SLBB domain M2J83_14715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M2J83_14720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M2J83_14725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M2J83_14730 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M2J83_14735 PF13609 Gram-negative porin M2J83_14745 PF03840 Preprotein translocase SecG subunit M2J83_14750 PF00121 Triosephosphate isomerase M2J83_14755 PF08240 Alcohol dehydrogenase GroES-like domain M2J83_14755 PF00107 Zinc-binding dehydrogenase M2J83_14770 PF07969 Amidohydrolase family M2J83_14775 PF03725 3' exoribonuclease family, domain 2 M2J83_14775 PF00575 S1 RNA binding domain M2J83_14775 PF00013 KH domain M2J83_14775 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M2J83_14775 PF01138 3' exoribonuclease family, domain 1 M2J83_14780 PF00312 Ribosomal protein S15 M2J83_14785 PF01066 CDP-alcohol phosphatidyltransferase M2J83_14790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M2J83_14790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M2J83_14795 PF10369 Small subunit of acetolactate synthase M2J83_14800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2J83_14800 PF00205 Thiamine pyrophosphate enzyme, central domain M2J83_14800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2J83_14805 PF12805 FUSC-like inner membrane protein yccS M2J83_14810 PF03883 Peroxide stress protein YaaA M2J83_14835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2J83_14835 PF02403 Seryl-tRNA synthetase N-terminal domain M2J83_14840 PF12002 MgsA AAA+ ATPase C terminal M2J83_14840 PF16193 AAA C-terminal domain M2J83_14840 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_14845 PF03548 Outer membrane lipoprotein carrier protein LolA M2J83_14850 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M2J83_14850 PF17854 FtsK alpha domain M2J83_14850 PF09397 Ftsk gamma domain M2J83_14850 PF01580 FtsK/SpoIIIE family M2J83_14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_14875 PF07690 Major Facilitator Superfamily M2J83_14895 PF00135 Carboxylesterase family M2J83_14900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M2J83_14900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_14905 PF00180 Isocitrate/isopropylmalate dehydrogenase M2J83_14920 PF00034 Cytochrome c M2J83_14925 PF17862 AAA+ lid domain M2J83_14925 PF01434 Peptidase family M41 M2J83_14925 PF00004 ATPase family associated with various cellular activities (AAA) M2J83_14945 PF00158 Sigma-54 interaction domain M2J83_14945 PF00072 Response regulator receiver domain M2J83_14945 PF02954 Bacterial regulatory protein, Fis family M2J83_14975 PF00437 Type II/IV secretion system protein M2J83_14985 PF04972 BON domain M2J83_14985 PF13629 Pilus formation protein N terminal region M2J83_14985 PF00263 Bacterial type II and III secretion system protein M2J83_15015 PF08479 POTRA domain, ShlB-type M2J83_15015 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M2J83_15040 PF00675 Insulinase (Peptidase family M16) M2J83_15040 PF05193 Peptidase M16 inactive domain M2J83_15045 PF00226 DnaJ domain M2J83_15045 PF00684 DnaJ central domain M2J83_15045 PF01556 DnaJ C terminal domain M2J83_15050 PF00012 Hsp70 protein M2J83_15055 PF01025 GrpE M2J83_15060 PF00762 Ferrochelatase M2J83_15065 PF01628 HrcA protein C terminal domain M2J83_15065 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding M2J83_15070 PF01513 ATP-NAD kinase M2J83_15075 PF02463 RecF/RecN/SMC N terminal domain M2J83_15080 PF01475 Ferric uptake regulator family M2J83_15085 PF04355 SmpA / OmlA family M2J83_15090 PF01113 Dihydrodipicolinate reductase, N-terminus M2J83_15090 PF05173 Dihydrodipicolinate reductase, C-terminus M2J83_15105 PF00561 alpha/beta hydrolase fold M2J83_15110 PF00465 Iron-containing alcohol dehydrogenase M2J83_15115 PF07690 Major Facilitator Superfamily M2J83_15125 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M2J83_15125 PF01565 FAD binding domain M2J83_15145 PF00589 Phage integrase family M2J83_15145 PF13356 Arm DNA-binding domain M2J83_15155 PF01381 Helix-turn-helix M2J83_15160 PF03466 LysR substrate binding domain M2J83_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_15165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2J83_15170 PF01037 Lrp/AsnC ligand binding domain M2J83_15180 PF00462 Glutaredoxin M2J83_15185 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_15190 PF00376 MerR family regulatory protein M2J83_15190 PF09278 MerR, DNA binding M2J83_15195 PF00403 Heavy-metal-associated domain M2J83_15200 PF01022 Bacterial regulatory protein, arsR family M2J83_15205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2J83_15205 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_15215 PF00873 AcrB/AcrD/AcrF family M2J83_15220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_15220 PF00529 HlyD membrane-fusion protein of T1SS M2J83_15235 PF02583 Metal-sensitive transcriptional repressor M2J83_15240 PF07690 Major Facilitator Superfamily M2J83_15245 PF01545 Cation efflux family M2J83_15250 PF01022 Bacterial regulatory protein, arsR family M2J83_15260 PF00403 Heavy-metal-associated domain M2J83_15265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_15270 PF00873 AcrB/AcrD/AcrF family M2J83_15275 PF02321 Outer membrane efflux protein M2J83_15285 PF07690 Major Facilitator Superfamily M2J83_15295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2J83_15295 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_15300 PF07690 Major Facilitator Superfamily M2J83_15315 PF07729 FCD domain M2J83_15315 PF00392 Bacterial regulatory proteins, gntR family M2J83_15335 PF00793 DAHP synthetase I family M2J83_15385 PF04002 RadC-like JAB domain M2J83_15525 PF06067 Domain of unknown function (DUF932) M2J83_15550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2J83_15550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_15550 PF00403 Heavy-metal-associated domain M2J83_15555 PF00403 Heavy-metal-associated domain M2J83_15560 PF02411 MerT mercuric transport protein M2J83_15565 PF09278 MerR, DNA binding M2J83_15565 PF00376 MerR family regulatory protein M2J83_15605 PF01252 Signal peptidase (SPase) II M2J83_15610 PF00403 Heavy-metal-associated domain M2J83_15615 PF13411 MerR HTH family regulatory protein M2J83_15635 PF01751 Toprim domain M2J83_15635 PF01131 DNA topoisomerase M2J83_15640 PF00436 Single-strand binding protein family M2J83_15675 PF13614 AAA domain M2J83_15705 PF02321 Outer membrane efflux protein M2J83_15710 PF13533 Biotin-lipoyl like M2J83_15730 PF07660 Secretin and TonB N terminus short domain M2J83_15730 PF00593 TonB dependent receptor M2J83_15730 PF07715 TonB-dependent Receptor Plug Domain M2J83_15735 PF07690 Major Facilitator Superfamily M2J83_15745 PF00756 Putative esterase M2J83_15765 PF00465 Iron-containing alcohol dehydrogenase M2J83_15770 PF00005 ABC transporter M2J83_15775 PF09383 NIL domain M2J83_15775 PF00005 ABC transporter M2J83_15785 PF02653 Branched-chain amino acid transport system / permease component M2J83_15795 PF00171 Aldehyde dehydrogenase family M2J83_15800 PF09339 IclR helix-turn-helix domain M2J83_15800 PF01614 Bacterial transcriptional regulator M2J83_15805 PF00270 DEAD/DEAH box helicase M2J83_15805 PF03880 DbpA RNA binding domain M2J83_15805 PF00271 Helicase conserved C-terminal domain M2J83_15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_15815 PF03466 LysR substrate binding domain M2J83_15820 PF00355 Rieske [2Fe-2S] domain M2J83_15820 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M2J83_15825 PF00866 Ring hydroxylating beta subunit M2J83_15830 PF00355 Rieske [2Fe-2S] domain M2J83_15835 PF00106 short chain dehydrogenase M2J83_15840 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_15840 PF14759 Reductase C-terminal M2J83_15845 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M2J83_15850 PF12697 Alpha/beta hydrolase family M2J83_15855 PF01557 Fumarylacetoacetate (FAA) hydrolase family M2J83_15860 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation M2J83_15860 PF01118 Semialdehyde dehydrogenase, NAD binding domain M2J83_15865 PF07836 DmpG-like communication domain M2J83_15865 PF00682 HMGL-like M2J83_15870 PF07690 Major Facilitator Superfamily M2J83_15885 PF01425 Amidase M2J83_15890 PF00392 Bacterial regulatory proteins, gntR family M2J83_15890 PF00155 Aminotransferase class I and II M2J83_15895 PF07690 Major Facilitator Superfamily M2J83_15920 PF11339 Protein of unknown function (DUF3141) M2J83_15925 PF00108 Thiolase, N-terminal domain M2J83_15925 PF02803 Thiolase, C-terminal domain M2J83_15930 PF00106 short chain dehydrogenase M2J83_15945 PF00005 ABC transporter M2J83_15950 PF13533 Biotin-lipoyl like M2J83_15955 PF02321 Outer membrane efflux protein M2J83_15960 PF00561 alpha/beta hydrolase fold M2J83_15960 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus M2J83_15970 PF02592 Putative vitamin uptake transporter M2J83_15975 PF06508 Queuosine biosynthesis protein QueC M2J83_15980 PF00464 Serine hydroxymethyltransferase M2J83_15985 PF00266 Aminotransferase class-V M2J83_15990 PF00155 Aminotransferase class I and II M2J83_15990 PF00392 Bacterial regulatory proteins, gntR family M2J83_15995 PF00464 Serine hydroxymethyltransferase M2J83_16010 PF00117 Glutamine amidotransferase class-I M2J83_16015 PF08543 Phosphomethylpyrimidine kinase M2J83_16020 PF02028 BCCT, betaine/carnitine/choline family transporter M2J83_16025 PF09278 MerR, DNA binding M2J83_16025 PF00376 MerR family regulatory protein M2J83_16035 PF00873 AcrB/AcrD/AcrF family M2J83_16060 PF02293 AmiS/UreI family transporter M2J83_16080 PF00115 Cytochrome C and Quinol oxidase polypeptide I M2J83_16085 PF00392 Bacterial regulatory proteins, gntR family M2J83_16085 PF00155 Aminotransferase class I and II M2J83_16095 PF03466 LysR substrate binding domain M2J83_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_16100 PF00202 Aminotransferase class-III M2J83_16105 PF01177 Asp/Glu/Hydantoin racemase M2J83_16120 PF04185 Phosphoesterase family M2J83_16120 PF05506 Domain of unknown function (DUF756) M2J83_16135 PF01389 OmpA-like transmembrane domain M2J83_16135 PF00691 OmpA family M2J83_16140 PF05662 Coiled stalk of trimeric autotransporter adhesin M2J83_16140 PF03895 YadA-like membrane anchor domain M2J83_16140 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin M2J83_16140 PF13018 Extended Signal Peptide of Type V secretion system M2J83_16150 PF02796 Helix-turn-helix domain of resolvase M2J83_16150 PF00239 Resolvase, N terminal domain M2J83_16155 PF00482 Type II secretion system (T2SS), protein F M2J83_16160 PF00437 Type II/IV secretion system protein M2J83_16165 PF00263 Bacterial type II and III secretion system protein M2J83_16165 PF03958 Bacterial type II/III secretion system short domain M2J83_16190 PF07963 Prokaryotic N-terminal methylation motif M2J83_16190 PF11612 Type II secretion system (T2SS), protein J M2J83_16205 PF07963 Prokaryotic N-terminal methylation motif M2J83_16205 PF08334 Type II secretion system (T2SS), protein G M2J83_16215 PF00478 IMP dehydrogenase / GMP reductase domain M2J83_16215 PF00571 CBS domain M2J83_16220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2J83_16225 PF00206 Lyase M2J83_16225 PF10415 Fumarase C C-terminus M2J83_16230 PF01047 MarR family M2J83_16245 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M2J83_16250 PF04377 Arginine-tRNA-protein transferase, C terminus M2J83_16250 PF04376 Arginine-tRNA-protein transferase, N terminus M2J83_16255 PF01180 Dihydroorotate dehydrogenase M2J83_16265 PF09339 IclR helix-turn-helix domain M2J83_16265 PF01614 Bacterial transcriptional regulator M2J83_16285 PF00271 Helicase conserved C-terminal domain M2J83_16285 PF00270 DEAD/DEAH box helicase M2J83_16305 PF00561 alpha/beta hydrolase fold M2J83_16310 PF01435 Peptidase family M48 M2J83_16330 PF01494 FAD binding domain M2J83_16335 PF01207 Dihydrouridine synthase (Dus) M2J83_16340 PF02954 Bacterial regulatory protein, Fis family M2J83_16345 PF01808 AICARFT/IMPCHase bienzyme M2J83_16345 PF02142 MGS-like domain M2J83_16350 PF02075 Crossover junction endodeoxyribonuclease RuvC M2J83_16355 PF07499 RuvA, C-terminal domain M2J83_16355 PF01330 RuvA N terminal domain M2J83_16360 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_16365 PF17864 RuvB AAA lid domain M2J83_16365 PF05491 RuvB C-terminal winged helix domain M2J83_16365 PF05496 Holliday junction DNA helicase RuvB P-loop domain M2J83_16375 PF01979 Amidohydrolase family M2J83_16385 PF03441 FAD binding domain of DNA photolyase M2J83_16385 PF00875 DNA photolyase M2J83_16430 PF00581 Rhodanese-like domain M2J83_16435 PF04143 Sulphur transport M2J83_16450 PF01625 Peptide methionine sulfoxide reductase M2J83_16455 PF00034 Cytochrome c M2J83_16460 PF01790 Prolipoprotein diacylglyceryl transferase M2J83_16485 PF01970 Tripartite tricarboxylate transporter TctA family M2J83_16490 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_16495 PF00005 ABC transporter M2J83_16495 PF08402 TOBE domain M2J83_16505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2J83_16505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2J83_16510 PF00512 His Kinase A (phospho-acceptor) domain M2J83_16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_16515 PF00486 Transcriptional regulatory protein, C terminal M2J83_16515 PF00072 Response regulator receiver domain M2J83_16520 PF00293 NUDIX domain M2J83_16525 PF03129 Anticodon binding domain M2J83_16525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2J83_16525 PF04073 Aminoacyl-tRNA editing domain M2J83_16530 PF03061 Thioesterase superfamily M2J83_16535 PF01618 MotA/TolQ/ExbB proton channel family M2J83_16540 PF02472 Biopolymer transport protein ExbD/TolR M2J83_16550 PF04052 TolB amino-terminal domain M2J83_16550 PF07676 WD40-like Beta Propeller Repeat M2J83_16555 PF00691 OmpA family M2J83_16565 PF00561 alpha/beta hydrolase fold M2J83_16580 PF01554 MatE M2J83_16585 PF02608 ABC transporter substrate-binding protein PnrA-like M2J83_16590 PF02653 Branched-chain amino acid transport system / permease component M2J83_16595 PF02653 Branched-chain amino acid transport system / permease component M2J83_16600 PF00005 ABC transporter M2J83_16610 PF01113 Dihydrodipicolinate reductase, N-terminus M2J83_16610 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain M2J83_16615 PF01810 LysE type translocator M2J83_16620 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M2J83_16620 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M2J83_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_16625 PF03466 LysR substrate binding domain M2J83_16630 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_16630 PF13192 Thioredoxin domain M2J83_16635 PF10417 C-terminal domain of 1-Cys peroxiredoxin M2J83_16635 PF00578 AhpC/TSA family M2J83_16640 PF00155 Aminotransferase class I and II M2J83_16645 PF00892 EamA-like transporter family M2J83_16650 PF01507 Phosphoadenosine phosphosulfate reductase family M2J83_16655 PF01507 Phosphoadenosine phosphosulfate reductase family M2J83_16660 PF00009 Elongation factor Tu GTP binding domain M2J83_16665 PF00324 Amino acid permease M2J83_16670 PF00171 Aldehyde dehydrogenase family M2J83_16675 PF01266 FAD dependent oxidoreductase M2J83_16680 PF07063 Domain of unknown function (DUF1338) M2J83_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_16685 PF03466 LysR substrate binding domain M2J83_16690 PF00871 Acetokinase family M2J83_16695 PF01515 Phosphate acetyl/butaryl transferase M2J83_16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_16705 PF03466 LysR substrate binding domain M2J83_16710 PF02678 Pirin M2J83_16710 PF17954 Quercetinase C-terminal cupin domain M2J83_16715 PF00990 Diguanylate cyclase, GGDEF domain M2J83_16715 PF17158 Membrane-associated sensor, integral membrane domain M2J83_16720 PF01425 Amidase M2J83_16730 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase M2J83_16735 PF00166 Chaperonin 10 Kd subunit M2J83_16740 PF00118 TCP-1/cpn60 chaperonin family M2J83_16745 PF01219 Prokaryotic diacylglycerol kinase M2J83_16750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M2J83_16755 PF02515 CoA-transferase family III M2J83_16760 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_16765 PF09339 IclR helix-turn-helix domain M2J83_16765 PF01614 Bacterial transcriptional regulator M2J83_16770 PF02464 Competence-damaged protein M2J83_16775 PF04608 Phosphatidylglycerophosphatase A M2J83_16780 PF00586 AIR synthase related protein, N-terminal domain M2J83_16780 PF02769 AIR synthase related protein, C-terminal domain M2J83_16785 PF01029 NusB family M2J83_16790 PF00885 6,7-dimethyl-8-ribityllumazine synthase M2J83_16795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M2J83_16795 PF00925 GTP cyclohydrolase II M2J83_16810 PF02881 SRP54-type protein, helical bundle domain M2J83_16810 PF00448 SRP54-type protein, GTPase domain M2J83_16820 PF01467 Cytidylyltransferase-like M2J83_16825 PF00037 4Fe-4S binding domain M2J83_16840 PF01053 Cys/Met metabolism PLP-dependent enzyme M2J83_16850 PF02423 Ornithine cyclodeaminase/mu-crystallin family M2J83_16855 PF07317 Flagellar regulator YcgR M2J83_16855 PF07238 PilZ domain M2J83_16870 PF00857 Isochorismatase family M2J83_16880 PF00561 alpha/beta hydrolase fold M2J83_16885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M2J83_16885 PF00034 Cytochrome c M2J83_16885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_16890 PF01799 [2Fe-2S] binding domain M2J83_16890 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_16895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M2J83_16895 PF00034 Cytochrome c M2J83_16895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_16905 PF00005 ABC transporter M2J83_16910 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2J83_16910 PF00005 ABC transporter M2J83_16920 PF13458 Periplasmic binding protein M2J83_16930 PF01804 Penicillin amidase M2J83_16935 PF17158 Membrane-associated sensor, integral membrane domain M2J83_16935 PF00990 Diguanylate cyclase, GGDEF domain M2J83_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_16940 PF03466 LysR substrate binding domain M2J83_16945 PF00884 Sulfatase M2J83_16945 PF16347 Domain of unknown function (DUF4976) M2J83_16950 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_16960 PF12706 Beta-lactamase superfamily domain M2J83_16960 PF00753 Metallo-beta-lactamase superfamily M2J83_16965 PF07702 UTRA domain M2J83_16965 PF00392 Bacterial regulatory proteins, gntR family M2J83_16975 PF13091 PLD-like domain M2J83_16985 PF01256 Carbohydrate kinase M2J83_16985 PF03853 YjeF-related protein N-terminus M2J83_16990 PF02625 XdhC and CoxI family M2J83_16990 PF13478 XdhC Rossmann domain M2J83_16995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_17005 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_17010 PF00005 ABC transporter M2J83_17020 PF01799 [2Fe-2S] binding domain M2J83_17020 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_17025 PF00941 FAD binding domain in molybdopterin dehydrogenase M2J83_17025 PF03450 CO dehydrogenase flavoprotein C-terminal domain M2J83_17030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M2J83_17030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M2J83_17035 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_17040 PF00355 Rieske [2Fe-2S] domain M2J83_17045 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_17045 PF14759 Reductase C-terminal M2J83_17050 PF00355 Rieske [2Fe-2S] domain M2J83_17050 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M2J83_17060 PF00857 Isochorismatase family M2J83_17070 PF00561 alpha/beta hydrolase fold M2J83_17080 PF01047 MarR family M2J83_17085 PF00005 ABC transporter M2J83_17090 PF01032 FecCD transport family M2J83_17100 PF00593 TonB dependent receptor M2J83_17100 PF07715 TonB-dependent Receptor Plug Domain M2J83_17105 PF02667 Short chain fatty acid transporter M2J83_17110 PF03466 LysR substrate binding domain M2J83_17110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_17115 PF01979 Amidohydrolase family M2J83_17120 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_17130 PF00929 Exonuclease M2J83_17135 PF00873 AcrB/AcrD/AcrF family M2J83_17140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M2J83_17145 PF00075 RNase H M2J83_17150 PF08241 Methyltransferase domain M2J83_17155 PF16123 Hydroxyacylglutathione hydrolase C-terminus M2J83_17155 PF00753 Metallo-beta-lactamase superfamily M2J83_17160 PF01476 LysM domain M2J83_17160 PF01464 Transglycosylase SLT domain M2J83_17170 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_17175 PF09084 NMT1/THI5 like M2J83_17180 PF00941 FAD binding domain in molybdopterin dehydrogenase M2J83_17180 PF03450 CO dehydrogenase flavoprotein C-terminal domain M2J83_17185 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_17185 PF01799 [2Fe-2S] binding domain M2J83_17190 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M2J83_17190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M2J83_17200 PF01047 MarR family M2J83_17205 PF00158 Sigma-54 interaction domain M2J83_17205 PF00072 Response regulator receiver domain M2J83_17205 PF02954 Bacterial regulatory protein, Fis family M2J83_17210 PF00512 His Kinase A (phospho-acceptor) domain M2J83_17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_17210 PF02743 Cache domain M2J83_17215 PF00375 Sodium:dicarboxylate symporter family M2J83_17225 PF17773 UPF0176 acylphosphatase like domain M2J83_17225 PF00581 Rhodanese-like domain M2J83_17250 PF04073 Aminoacyl-tRNA editing domain M2J83_17255 PF01590 GAF domain M2J83_17255 PF00158 Sigma-54 interaction domain M2J83_17255 PF02954 Bacterial regulatory protein, Fis family M2J83_17265 PF04963 Sigma-54 factor, core binding domain M2J83_17265 PF00309 Sigma-54 factor, Activator interacting domain (AID) M2J83_17265 PF04552 Sigma-54, DNA binding domain M2J83_17270 PF00982 Glycosyltransferase family 20 M2J83_17290 PF02358 Trehalose-phosphatase M2J83_17305 PF05995 Cysteine dioxygenase type I M2J83_17310 PF00378 Enoyl-CoA hydratase/isomerase M2J83_17315 PF13380 CoA binding domain M2J83_17315 PF13607 Succinyl-CoA ligase like flavodoxin domain M2J83_17320 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_17325 PF08240 Alcohol dehydrogenase GroES-like domain M2J83_17325 PF00107 Zinc-binding dehydrogenase M2J83_17330 PF02515 CoA-transferase family III M2J83_17335 PF00378 Enoyl-CoA hydratase/isomerase M2J83_17350 PF00107 Zinc-binding dehydrogenase M2J83_17350 PF08240 Alcohol dehydrogenase GroES-like domain M2J83_17355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M2J83_17360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_17360 PF03466 LysR substrate binding domain M2J83_17375 PF05506 Domain of unknown function (DUF756) M2J83_17375 PF04185 Phosphoesterase family M2J83_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_17380 PF03466 LysR substrate binding domain M2J83_17390 PF00465 Iron-containing alcohol dehydrogenase M2J83_17395 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_17400 PF00005 ABC transporter M2J83_17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_17410 PF03466 LysR substrate binding domain M2J83_17415 PF13193 AMP-binding enzyme C-terminal domain M2J83_17415 PF00501 AMP-binding enzyme M2J83_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_17430 PF03466 LysR substrate binding domain M2J83_17435 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_17445 PF02040 Arsenical pump membrane protein M2J83_17450 PF03960 ArsC family M2J83_17455 PF03358 NADPH-dependent FMN reductase M2J83_17460 PF00072 Response regulator receiver domain M2J83_17460 PF00486 Transcriptional regulatory protein, C terminal M2J83_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_17465 PF08521 Two-component sensor kinase N-terminal M2J83_17465 PF00512 His Kinase A (phospho-acceptor) domain M2J83_17490 PF01464 Transglycosylase SLT domain M2J83_17505 PF03135 CagE, TrbE, VirB family, component of type IV transporter system M2J83_17535 PF04335 VirB8 protein M2J83_17545 PF03743 Bacterial conjugation TrbI-like protein M2J83_17550 PF00437 Type II/IV secretion system protein M2J83_17580 PF05872 Bacterial protein of unknown function (DUF853) M2J83_17585 PF18272 single-stranded DNA binding TraI N-terminal subdomain M2J83_17585 PF07057 DNA helicase TraI M2J83_17585 PF18340 DNA relaxase TraI 2B/2B-like domain M2J83_17585 PF08751 TrwC relaxase M2J83_17595 PF01381 Helix-turn-helix M2J83_17600 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB M2J83_17610 PF05721 Phytanoyl-CoA dioxygenase (PhyH) M2J83_17620 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_17625 PF00005 ABC transporter M2J83_17630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2J83_17630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2J83_17635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_17635 PF03466 LysR substrate binding domain M2J83_17655 PF00589 Phage integrase family M2J83_17665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2J83_17665 PF01872 RibD C-terminal domain M2J83_17670 PF03477 ATP cone domain M2J83_17675 PF00464 Serine hydroxymethyltransferase M2J83_17680 PF01161 Phosphatidylethanolamine-binding protein M2J83_17685 PF00579 tRNA synthetases class I (W and Y) M2J83_17685 PF01479 S4 domain M2J83_17690 PF01551 Peptidase family M23 M2J83_17690 PF04225 Opacity-associated protein A LysM-like domain M2J83_17695 PF03702 Anhydro-N-acetylmuramic acid kinase M2J83_17700 PF01521 Iron-sulphur cluster biosynthesis M2J83_17710 PF02774 Semialdehyde dehydrogenase, dimerisation domain M2J83_17710 PF01118 Semialdehyde dehydrogenase, NAD binding domain M2J83_17715 PF00380 Ribosomal protein S9/S16 M2J83_17720 PF00572 Ribosomal protein L13 M2J83_17725 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_17730 PF01523 Putative modulator of DNA gyrase M2J83_17735 PF04751 Protein of unknown function (DUF615) M2J83_17755 PF00690 Cation transporter/ATPase, N-terminus M2J83_17755 PF00689 Cation transporting ATPase, C-terminus M2J83_17760 PF13426 PAS domain M2J83_17760 PF00072 Response regulator receiver domain M2J83_17760 PF00512 His Kinase A (phospho-acceptor) domain M2J83_17760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_17760 PF08448 PAS fold M2J83_17765 PF00196 Bacterial regulatory proteins, luxR family M2J83_17765 PF00072 Response regulator receiver domain M2J83_17770 PF00749 tRNA synthetases class I (E and Q), catalytic domain M2J83_17775 PF01979 Amidohydrolase family M2J83_17780 PF00860 Permease family M2J83_17785 PF12697 Alpha/beta hydrolase family M2J83_17790 PF00355 Rieske [2Fe-2S] domain M2J83_17800 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_17800 PF00970 Oxidoreductase FAD-binding domain M2J83_17805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_17805 PF03466 LysR substrate binding domain M2J83_17810 PF07152 YaeQ protein M2J83_17820 PF01037 Lrp/AsnC ligand binding domain M2J83_17835 PF02325 YGGT family M2J83_17845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M2J83_17845 PF12833 Helix-turn-helix domain M2J83_17845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M2J83_17845 PF02805 Metal binding domain of Ada M2J83_17850 PF05433 Glycine zipper 2TM domain M2J83_17855 PF00294 pfkB family carbohydrate kinase M2J83_17870 PF02785 Biotin carboxylase C-terminal domain M2J83_17870 PF00289 Biotin carboxylase, N-terminal domain M2J83_17870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2J83_17875 PF00364 Biotin-requiring enzyme M2J83_17880 PF01220 Dehydroquinase class II M2J83_17885 PF00578 AhpC/TSA family M2J83_17890 PF08245 Mur ligase middle domain M2J83_17890 PF01225 Mur ligase family, catalytic domain M2J83_17890 PF02875 Mur ligase family, glutamate ligase domain M2J83_17895 PF05728 Uncharacterised protein family (UPF0227) M2J83_17910 PF08501 Shikimate dehydrogenase substrate binding domain M2J83_17910 PF01488 Shikimate / quinate 5-dehydrogenase M2J83_17910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M2J83_17915 PF00912 Transglycosylase M2J83_17925 PF00149 Calcineurin-like phosphoesterase M2J83_17930 PF01553 Acyltransferase M2J83_17935 PF03652 Holliday junction resolvase M2J83_17940 PF02622 Uncharacterized ACR, COG1678 M2J83_17945 PF00301 Rubredoxin M2J83_17955 PF02581 Thiamine monophosphate synthase M2J83_17960 PF00202 Aminotransferase class-III M2J83_17965 PF00501 AMP-binding enzyme M2J83_17965 PF13193 AMP-binding enzyme C-terminal domain M2J83_17975 PF01960 ArgJ family M2J83_17985 PF05532 CsbD-like M2J83_17990 PF00829 Ribosomal prokaryotic L21 protein M2J83_17995 PF01016 Ribosomal L27 protein M2J83_18000 PF01926 50S ribosome-binding GTPase M2J83_18000 PF01018 GTP1/OBG M2J83_18005 PF00696 Amino acid kinase family M2J83_18005 PF01472 PUA domain M2J83_18010 PF01266 FAD dependent oxidoreductase M2J83_18030 PF13667 ThiC-associated domain M2J83_18030 PF01964 Radical SAM ThiC family M2J83_18035 PF00691 OmpA family M2J83_18035 PF05736 OprF membrane domain M2J83_18040 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_18045 PF00005 ABC transporter M2J83_18050 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_18055 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_18060 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2J83_18065 PF00005 ABC transporter M2J83_18070 PF18075 FtsX extracellular domain M2J83_18075 PF00730 HhH-GPD superfamily base excision DNA repair protein M2J83_18075 PF14815 NUDIX domain M2J83_18080 PF01098 Cell cycle protein M2J83_18085 PF03717 Penicillin-binding Protein dimerisation domain M2J83_18085 PF00905 Penicillin binding protein transpeptidase domain M2J83_18095 PF04085 rod shape-determining protein MreC M2J83_18105 PF02686 Glu-tRNAGln amidotransferase C subunit M2J83_18110 PF01425 Amidase M2J83_18115 PF02934 GatB/GatE catalytic domain M2J83_18115 PF02637 GatB domain M2J83_18120 PF00156 Phosphoribosyl transferase domain M2J83_18125 PF03466 LysR substrate binding domain M2J83_18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_18130 PF07681 DoxX M2J83_18135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M2J83_18145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_18150 PF00394 Multicopper oxidase M2J83_18150 PF07732 Multicopper oxidase M2J83_18155 PF00115 Cytochrome C and Quinol oxidase polypeptide I M2J83_18160 PF02954 Bacterial regulatory protein, Fis family M2J83_18160 PF00158 Sigma-54 interaction domain M2J83_18175 PF03616 Sodium/glutamate symporter M2J83_18180 PF00348 Polyprenyl synthetase M2J83_18190 PF00293 NUDIX domain M2J83_18195 PF17284 Spermidine synthase tetramerisation domain M2J83_18200 PF02321 Outer membrane efflux protein M2J83_18205 PF00873 AcrB/AcrD/AcrF family M2J83_18210 PF00873 AcrB/AcrD/AcrF family M2J83_18215 PF13533 Biotin-lipoyl like M2J83_18220 PF07072 Cell division protein M2J83_18225 PF01121 Dephospho-CoA kinase M2J83_18235 PF00196 Bacterial regulatory proteins, luxR family M2J83_18235 PF00072 Response regulator receiver domain M2J83_18240 PF02569 Pantoate-beta-alanine ligase M2J83_18245 PF02616 Segregation and condensation protein ScpA M2J83_18255 PF07690 Major Facilitator Superfamily M2J83_18260 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M2J83_18260 PF01243 Pyridoxamine 5'-phosphate oxidase M2J83_18265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M2J83_18265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M2J83_18270 PF00218 Indole-3-glycerol phosphate synthase M2J83_18275 PF02885 Glycosyl transferase family, helical bundle domain M2J83_18275 PF00591 Glycosyl transferase family, a/b domain M2J83_18280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M2J83_18280 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2J83_18305 PF02310 B12 binding domain M2J83_18305 PF02574 Homocysteine S-methyltransferase M2J83_18305 PF00809 Pterin binding enzyme M2J83_18305 PF02965 Vitamin B12 dependent methionine synthase, activation domain M2J83_18305 PF02607 B12 binding domain M2J83_18310 PF07715 TonB-dependent Receptor Plug Domain M2J83_18310 PF00593 TonB dependent receptor M2J83_18315 PF01497 Periplasmic binding protein M2J83_18325 PF13609 Gram-negative porin M2J83_18335 PF01544 CorA-like Mg2+ transporter protein M2J83_18345 PF01544 CorA-like Mg2+ transporter protein M2J83_18360 PF05690 Thiazole biosynthesis protein ThiG M2J83_18365 PF08543 Phosphomethylpyrimidine kinase M2J83_18370 PF01048 Phosphorylase superfamily M2J83_18375 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M2J83_18385 PF02321 Outer membrane efflux protein M2J83_18390 PF01467 Cytidylyltransferase-like M2J83_18400 PF03109 ABC1 family M2J83_18415 PF01209 ubiE/COQ5 methyltransferase family M2J83_18420 PF00072 Response regulator receiver domain M2J83_18420 PF00486 Transcriptional regulatory protein, C terminal M2J83_18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_18425 PF00512 His Kinase A (phospho-acceptor) domain M2J83_18425 PF00989 PAS fold M2J83_18425 PF11808 Phosphate regulon sensor protein PhoR M2J83_18435 PF02682 Carboxyltransferase domain, subdomain C and D M2J83_18440 PF02626 Carboxyltransferase domain, subdomain A and B M2J83_18445 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_18445 PF00585 C-terminal regulatory domain of Threonine dehydratase M2J83_18450 PF09335 SNARE associated Golgi protein M2J83_18465 PF00082 Subtilase family M2J83_18465 PF03797 Autotransporter beta-domain M2J83_18465 PF12951 Passenger-associated-transport-repeat M2J83_18470 PF00156 Phosphoribosyl transferase domain M2J83_18475 PF00005 ABC transporter M2J83_18475 PF00664 ABC transporter transmembrane region M2J83_18480 PF00664 ABC transporter transmembrane region M2J83_18480 PF00005 ABC transporter M2J83_18485 PF08173 Membrane bound YbgT-like protein M2J83_18490 PF02322 Cytochrome bd terminal oxidase subunit II M2J83_18495 PF01654 Cytochrome bd terminal oxidase subunit I M2J83_18505 PF01380 SIS domain M2J83_18505 PF00571 CBS domain M2J83_18525 PF00005 ABC transporter M2J83_18530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M2J83_18535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2J83_18540 PF07475 HPr Serine kinase C-terminal domain M2J83_18540 PF02603 HPr Serine kinase N terminus M2J83_18545 PF03668 P-loop ATPase protein family M2J83_18550 PF03330 Lytic transglycolase M2J83_18550 PF05036 Sporulation related domain M2J83_18555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2J83_18560 PF02021 Uncharacterised protein family UPF0102 M2J83_18565 PF13580 SIS domain M2J83_18575 PF00578 AhpC/TSA family M2J83_18580 PF00696 Amino acid kinase family M2J83_18590 PF00171 Aldehyde dehydrogenase family M2J83_18595 PF12833 Helix-turn-helix domain M2J83_18600 PF00899 ThiF family M2J83_18605 PF13180 PDZ domain M2J83_18605 PF03572 Peptidase family S41 M2J83_18610 PF01551 Peptidase family M23 M2J83_18615 PF00300 Histidine phosphatase superfamily (branch 1) M2J83_18620 PF00581 Rhodanese-like domain M2J83_18625 PF00462 Glutaredoxin M2J83_18630 PF02556 Preprotein translocase subunit SecB M2J83_18635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M2J83_18635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M2J83_18640 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_18645 PF00588 SpoU rRNA Methylase family M2J83_18650 PF00156 Phosphoribosyl transferase domain M2J83_18655 PF08241 Methyltransferase domain M2J83_18660 PF07715 TonB-dependent Receptor Plug Domain M2J83_18660 PF00593 TonB dependent receptor M2J83_18665 PF00072 Response regulator receiver domain M2J83_18665 PF00486 Transcriptional regulatory protein, C terminal M2J83_18675 PF00672 HAMP domain M2J83_18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_18675 PF00512 His Kinase A (phospho-acceptor) domain M2J83_18680 PF00885 6,7-dimethyl-8-ribityllumazine synthase M2J83_18685 PF00158 Sigma-54 interaction domain M2J83_18685 PF00072 Response regulator receiver domain M2J83_18685 PF02954 Bacterial regulatory protein, Fis family M2J83_18690 PF00672 HAMP domain M2J83_18690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_18700 PF01029 NusB family M2J83_18700 PF01189 16S rRNA methyltransferase RsmB/F M2J83_18705 PF18693 TRAM domain M2J83_18705 PF04055 Radical SAM superfamily M2J83_18705 PF00919 Uncharacterized protein family UPF0004 M2J83_18710 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_18715 PF17645 Arylmalonate decarboxylase M2J83_18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_18720 PF03466 LysR substrate binding domain M2J83_18725 PF03328 HpcH/HpaI aldolase/citrate lyase family M2J83_18730 PF00005 ABC transporter M2J83_18735 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_18760 PF01050 Mannose-6-phosphate isomerase M2J83_18760 PF00483 Nucleotidyl transferase M2J83_18765 PF00535 Glycosyl transferase family 2 M2J83_18775 PF02397 Bacterial sugar transferase M2J83_18785 PF01943 Polysaccharide biosynthesis protein M2J83_18785 PF14667 Polysaccharide biosynthesis C-terminal domain M2J83_18790 PF16363 GDP-mannose 4,6 dehydratase M2J83_18795 PF00483 Nucleotidyl transferase M2J83_18800 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M2J83_18805 PF04321 RmlD substrate binding domain M2J83_18810 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M2J83_18815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2J83_18815 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2J83_18820 PF00231 ATP synthase M2J83_18825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2J83_18825 PF00306 ATP synthase alpha/beta chain, C terminal domain M2J83_18825 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2J83_18830 PF00213 ATP synthase delta (OSCP) subunit M2J83_18835 PF00430 ATP synthase B/B' CF(0) M2J83_18840 PF00137 ATP synthase subunit C M2J83_18845 PF00119 ATP synthase A chain M2J83_18855 PF00378 Enoyl-CoA hydratase/isomerase M2J83_18870 PF01171 PP-loop family M2J83_18875 PF02441 Flavoprotein M2J83_18880 PF00462 Glutaredoxin M2J83_18885 PF17827 PrmC N-terminal domain M2J83_18885 PF05175 Methyltransferase small domain M2J83_18890 PF03462 PCRF domain M2J83_18890 PF00472 RF-1 domain M2J83_18895 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M2J83_18895 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M2J83_18895 PF01488 Shikimate / quinate 5-dehydrogenase M2J83_18960 PF02472 Biopolymer transport protein ExbD/TolR M2J83_18965 PF01618 MotA/TolQ/ExbB proton channel family M2J83_18980 PF00398 Ribosomal RNA adenine dimethylase M2J83_18990 PF07715 TonB-dependent Receptor Plug Domain M2J83_18990 PF00593 TonB dependent receptor M2J83_19010 PF00474 Sodium:solute symporter family M2J83_19015 PF00795 Carbon-nitrogen hydrolase M2J83_19025 PF00080 Copper/zinc superoxide dismutase (SODC) M2J83_19035 PF05145 Transition state regulatory protein AbrB M2J83_19040 PF01970 Tripartite tricarboxylate transporter TctA family M2J83_19055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_19055 PF00512 His Kinase A (phospho-acceptor) domain M2J83_19055 PF00672 HAMP domain M2J83_19060 PF00072 Response regulator receiver domain M2J83_19060 PF00486 Transcriptional regulatory protein, C terminal M2J83_19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_19065 PF03466 LysR substrate binding domain M2J83_19070 PF00083 Sugar (and other) transporter M2J83_19070 PF08946 Osmosensory transporter coiled coil M2J83_19075 PF00795 Carbon-nitrogen hydrolase M2J83_19095 PF00005 ABC transporter M2J83_19125 PF13247 4Fe-4S dicluster domain M2J83_19125 PF12800 4Fe-4S binding domain M2J83_19125 PF09163 Formate dehydrogenase N, transmembrane M2J83_19130 PF01292 Prokaryotic cytochrome b561 M2J83_19135 PF04216 Protein involved in formate dehydrogenase formation M2J83_19140 PF12390 Selenocysteine synthase N terminal M2J83_19140 PF03841 L-seryl-tRNA selenium transferase M2J83_19145 PF09106 Elongation factor SelB, winged helix M2J83_19145 PF03144 Elongation factor Tu domain 2 M2J83_19145 PF00009 Elongation factor Tu GTP binding domain M2J83_19145 PF09107 Elongation factor SelB, winged helix M2J83_19155 PF01381 Helix-turn-helix M2J83_19160 PF00596 Class II Aldolase and Adducin N-terminal domain M2J83_19170 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_19175 PF00593 TonB dependent receptor M2J83_19175 PF07715 TonB-dependent Receptor Plug Domain M2J83_19185 PF07660 Secretin and TonB N terminus short domain M2J83_19185 PF07715 TonB-dependent Receptor Plug Domain M2J83_19185 PF00593 TonB dependent receptor M2J83_19190 PF00586 AIR synthase related protein, N-terminal domain M2J83_19190 PF02769 AIR synthase related protein, C-terminal domain M2J83_19205 PF03466 LysR substrate binding domain M2J83_19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_19215 PF12801 4Fe-4S binding domain M2J83_19215 PF04205 FMN-binding domain M2J83_19220 PF13473 Cupredoxin-like domain M2J83_19220 PF18764 Nitrous oxide reductase propeller repeat M2J83_19220 PF18793 Nitrous oxide reductase propeller repeat 2 M2J83_19225 PF05048 Periplasmic copper-binding protein (NosD) M2J83_19230 PF00005 ABC transporter M2J83_19235 PF12679 ABC-2 family transporter protein M2J83_19250 PF00342 Phosphoglucose isomerase M2J83_19260 PF00106 short chain dehydrogenase M2J83_19300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M2J83_19300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M2J83_19300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M2J83_19305 PF02350 UDP-N-acetylglucosamine 2-epimerase M2J83_19320 PF00005 ABC transporter M2J83_19325 PF01061 ABC-2 type transporter M2J83_19330 PF02563 Polysaccharide biosynthesis/export protein M2J83_19335 PF00155 Aminotransferase class I and II M2J83_19340 PF00550 Phosphopantetheine attachment site M2J83_19345 PF00698 Acyl transferase domain M2J83_19345 PF08240 Alcohol dehydrogenase GroES-like domain M2J83_19345 PF16197 Ketoacyl-synthetase C-terminal extension M2J83_19345 PF00109 Beta-ketoacyl synthase, N-terminal domain M2J83_19345 PF02801 Beta-ketoacyl synthase, C-terminal domain M2J83_19345 PF08659 KR domain M2J83_19345 PF00550 Phosphopantetheine attachment site M2J83_19345 PF14765 Polyketide synthase dehydratase M2J83_19350 PF00860 Permease family M2J83_19355 PF00892 EamA-like transporter family M2J83_19360 PF00392 Bacterial regulatory proteins, gntR family M2J83_19360 PF00155 Aminotransferase class I and II M2J83_19365 PF00892 EamA-like transporter family M2J83_19380 PF06761 Intracellular multiplication and human macrophage-killing M2J83_19380 PF14331 ImcF-related N-terminal domain M2J83_19380 PF06744 Type VI secretion protein IcmF C-terminal M2J83_19385 PF13488 Glycine zipper M2J83_19385 PF00691 OmpA family M2J83_19390 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M2J83_19415 PF05947 Type VI secretion system, TssF M2J83_19420 PF04965 Gene 25-like lysozyme M2J83_19430 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M2J83_19435 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 M2J83_19470 PF04717 Type VI secretion system, phage-baseplate injector M2J83_19470 PF06715 Gp5 C-terminal repeat (3 copies) M2J83_19480 PF00108 Thiolase, N-terminal domain M2J83_19480 PF02803 Thiolase, C-terminal domain M2J83_19485 PF00378 Enoyl-CoA hydratase/isomerase M2J83_19485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M2J83_19485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M2J83_19500 PF00005 ABC transporter M2J83_19505 PF02405 Permease MlaE M2J83_19510 PF02470 MlaD protein M2J83_19525 PF00005 ABC transporter M2J83_19530 PF01061 ABC-2 type transporter M2J83_19540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2J83_19545 PF01634 ATP phosphoribosyltransferase M2J83_19550 PF00815 Histidinol dehydrogenase M2J83_19555 PF00475 Imidazoleglycerol-phosphate dehydratase M2J83_19560 PF00117 Glutamine amidotransferase class-I M2J83_19565 PF00977 Histidine biosynthesis protein M2J83_19570 PF00977 Histidine biosynthesis protein M2J83_19575 PF01502 Phosphoribosyl-AMP cyclohydrolase M2J83_19580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M2J83_19585 PF01230 HIT domain M2J83_19590 PF02416 mttA/Hcf106 family M2J83_19595 PF02416 mttA/Hcf106 family M2J83_19600 PF00902 Sec-independent protein translocase protein (TatC) M2J83_19605 PF13180 PDZ domain M2J83_19610 PF01784 NIF3 (NGG1p interacting factor 3) M2J83_19615 PF01741 Large-conductance mechanosensitive channel, MscL M2J83_19620 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M2J83_19620 PF00355 Rieske [2Fe-2S] domain M2J83_19625 PF00033 Cytochrome b/b6/petB M2J83_19625 PF00032 Cytochrome b(C-terminal)/b6/petD M2J83_19630 PF02167 Cytochrome C1 family M2J83_19635 PF02798 Glutathione S-transferase, N-terminal domain M2J83_19635 PF00043 Glutathione S-transferase, C-terminal domain M2J83_19640 PF04386 Stringent starvation protein B M2J83_19645 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_19650 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_19670 PF01070 FMN-dependent dehydrogenase M2J83_19680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2J83_19680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2J83_19690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M2J83_19700 PF03480 Bacterial extracellular solute-binding protein, family 7 M2J83_19705 PF01370 NAD dependent epimerase/dehydratase family M2J83_19715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2J83_19715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2J83_19720 PF00920 Dehydratase family M2J83_19725 PF07729 FCD domain M2J83_19725 PF00392 Bacterial regulatory proteins, gntR family M2J83_19730 PF01037 Lrp/AsnC ligand binding domain M2J83_19730 PF13404 AsnC-type helix-turn-helix domain M2J83_19740 PF03301 Tryptophan 2,3-dioxygenase M2J83_19755 PF03466 LysR substrate binding domain M2J83_19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_19760 PF02548 Ketopantoate hydroxymethyltransferase M2J83_19765 PF00248 Aldo/keto reductase family M2J83_19770 PF07690 Major Facilitator Superfamily M2J83_19775 PF00330 Aconitase family (aconitate hydratase) M2J83_19775 PF00694 Aconitase C-terminal domain M2J83_19780 PF07694 5TMR of 5TMR-LYT M2J83_19780 PF00990 Diguanylate cyclase, GGDEF domain M2J83_19785 PF13847 Methyltransferase domain M2J83_19795 PF00795 Carbon-nitrogen hydrolase M2J83_19810 PF07969 Amidohydrolase family M2J83_19815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_19815 PF03466 LysR substrate binding domain M2J83_19820 PF00083 Sugar (and other) transporter M2J83_19820 PF08946 Osmosensory transporter coiled coil M2J83_19830 PF02678 Pirin M2J83_19830 PF05726 Pirin C-terminal cupin domain M2J83_19835 PF00857 Isochorismatase family M2J83_19840 PF00857 Isochorismatase family M2J83_19845 PF02678 Pirin M2J83_19845 PF05726 Pirin C-terminal cupin domain M2J83_19850 PF03466 LysR substrate binding domain M2J83_19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_19855 PF05532 CsbD-like M2J83_19860 PF04972 BON domain M2J83_19865 PF00743 Flavin-binding monooxygenase-like M2J83_19870 PF00158 Sigma-54 interaction domain M2J83_19870 PF02954 Bacterial regulatory protein, Fis family M2J83_19870 PF01590 GAF domain M2J83_19890 PF07715 TonB-dependent Receptor Plug Domain M2J83_19890 PF00593 TonB dependent receptor M2J83_19900 PF08281 Sigma-70, region 4 M2J83_19900 PF04542 Sigma-70 region 2 M2J83_19920 PF02308 MgtC family M2J83_19935 PF00149 Calcineurin-like phosphoesterase M2J83_19945 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_19950 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_19955 PF00005 ABC transporter M2J83_19955 PF17912 MalK OB fold domain M2J83_19960 PF13419 Haloacid dehalogenase-like hydrolase M2J83_19965 PF08220 DeoR-like helix-turn-helix domain M2J83_19965 PF00455 DeoR C terminal sensor domain M2J83_19975 PF18623 TnsE C-terminal domain M2J83_19980 PF06527 TniQ M2J83_19980 PF15978 Tn7-like transposition protein D M2J83_19985 PF11426 Tn7 transposition regulator TnsC M2J83_19985 PF13401 AAA domain M2J83_19990 PF00665 Integrase core domain M2J83_19995 PF08721 TnsA endonuclease C terminal M2J83_19995 PF08722 TnsA endonuclease N terminal M2J83_20000 PF01380 SIS domain M2J83_20005 PF01037 Lrp/AsnC ligand binding domain M2J83_20015 PF12804 MobA-like NTP transferase domain M2J83_20015 PF14602 Hexapeptide repeat of succinyl-transferase M2J83_20015 PF00132 Bacterial transferase hexapeptide (six repeats) M2J83_20030 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M2J83_20030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M2J83_20035 PF00115 Cytochrome C and Quinol oxidase polypeptide I M2J83_20050 PF00510 Cytochrome c oxidase subunit III M2J83_20070 PF02628 Cytochrome oxidase assembly protein M2J83_20075 PF01040 UbiA prenyltransferase family M2J83_20080 PF00999 Sodium/hydrogen exchanger family M2J83_20090 PF00593 TonB dependent receptor M2J83_20090 PF07715 TonB-dependent Receptor Plug Domain M2J83_20095 PF00140 Sigma-70 factor, region 1.2 M2J83_20095 PF04542 Sigma-70 region 2 M2J83_20095 PF04545 Sigma-70, region 4 M2J83_20100 PF00756 Putative esterase M2J83_20105 PF08240 Alcohol dehydrogenase GroES-like domain M2J83_20105 PF00107 Zinc-binding dehydrogenase M2J83_20110 PF13091 PLD-like domain M2J83_20115 PF03372 Endonuclease/Exonuclease/phosphatase family M2J83_20120 PF02938 GAD domain M2J83_20120 PF00152 tRNA synthetases class II (D, K and N) M2J83_20120 PF01336 OB-fold nucleic acid binding domain M2J83_20140 PF01040 UbiA prenyltransferase family M2J83_20145 PF00155 Aminotransferase class I and II M2J83_20155 PF01979 Amidohydrolase family M2J83_20165 PF00221 Aromatic amino acid lyase M2J83_20170 PF17391 Urocanase N-terminal domain M2J83_20170 PF17392 Urocanase C-terminal domain M2J83_20170 PF01175 Urocanase Rossmann-like domain M2J83_20175 PF00392 Bacterial regulatory proteins, gntR family M2J83_20175 PF07702 UTRA domain M2J83_20190 PF00797 N-acetyltransferase M2J83_20195 PF00085 Thioredoxin M2J83_20200 PF07690 Major Facilitator Superfamily M2J83_20210 PF13411 MerR HTH family regulatory protein M2J83_20215 PF07690 Major Facilitator Superfamily M2J83_20230 PF00043 Glutathione S-transferase, C-terminal domain M2J83_20230 PF02798 Glutathione S-transferase, N-terminal domain M2J83_20235 PF03466 LysR substrate binding domain M2J83_20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_20240 PF00175 Oxidoreductase NAD-binding domain M2J83_20240 PF00042 Globin M2J83_20240 PF00970 Oxidoreductase FAD-binding domain M2J83_20245 PF00355 Rieske [2Fe-2S] domain M2J83_20250 PF03466 LysR substrate binding domain M2J83_20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2J83_20255 PF00155 Aminotransferase class I and II M2J83_20260 PF13350 Tyrosine phosphatase family M2J83_20265 PF00753 Metallo-beta-lactamase superfamily M2J83_20265 PF10996 Beta-Casp domain M2J83_20265 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M2J83_20285 PF02423 Ornithine cyclodeaminase/mu-crystallin family M2J83_20290 PF00970 Oxidoreductase FAD-binding domain M2J83_20290 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_20290 PF00175 Oxidoreductase NAD-binding domain M2J83_20310 PF00111 2Fe-2S iron-sulfur cluster binding domain M2J83_20310 PF00970 Oxidoreductase FAD-binding domain M2J83_20310 PF00175 Oxidoreductase NAD-binding domain M2J83_20315 PF03928 Haem-degrading M2J83_20320 PF00171 Aldehyde dehydrogenase family M2J83_20345 PF07729 FCD domain M2J83_20345 PF00392 Bacterial regulatory proteins, gntR family M2J83_20350 PF00440 Bacterial regulatory proteins, tetR family M2J83_20355 PF07690 Major Facilitator Superfamily M2J83_20360 PF00210 Ferritin-like domain M2J83_20370 PF07690 Major Facilitator Superfamily M2J83_20375 PF01042 Endoribonuclease L-PSP M2J83_20380 PF03401 Tripartite tricarboxylate transporter family receptor M2J83_20385 PF01557 Fumarylacetoacetate (FAA) hydrolase family M2J83_20390 PF07729 FCD domain M2J83_20390 PF00392 Bacterial regulatory proteins, gntR family M2J83_20395 PF00436 Single-strand binding protein family M2J83_20400 PF07690 Major Facilitator Superfamily M2J83_20405 PF17755 UvrA DNA-binding domain M2J83_20405 PF17760 UvrA interaction domain M2J83_20410 PF13286 Phosphohydrolase-associated domain M2J83_20410 PF01966 HD domain M2J83_20415 PF01761 3-dehydroquinate synthase M2J83_20420 PF01202 Shikimate kinase M2J83_20425 PF00905 Penicillin binding protein transpeptidase domain M2J83_20425 PF00912 Transglycosylase M2J83_20425 PF17092 Penicillin-binding protein OB-like domain M2J83_20435 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M2J83_20435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M2J83_20440 PF00990 Diguanylate cyclase, GGDEF domain M2J83_20440 PF00563 EAL domain M2J83_20440 PF08448 PAS fold M2J83_20445 PF01578 Cytochrome C assembly protein M2J83_20450 PF05140 ResB-like family M2J83_20455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M2J83_20460 PF01926 50S ribosome-binding GTPase M2J83_20465 PF00490 Delta-aminolevulinic acid dehydratase M2J83_20470 PF11412 Disulphide bond corrector protein DsbC M2J83_20470 PF02683 Cytochrome C biogenesis protein transmembrane region M2J83_20475 PF03091 CutA1 divalent ion tolerance protein M2J83_20480 PF14525 AraC-binding-like domain M2J83_20480 PF12833 Helix-turn-helix domain M2J83_20490 PF00296 Luciferase-like monooxygenase M2J83_20495 PF01196 Ribosomal protein L17 M2J83_20500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M2J83_20500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M2J83_20500 PF01000 RNA polymerase Rpb3/RpoA insert domain M2J83_20505 PF00163 Ribosomal protein S4/S9 N-terminal domain M2J83_20505 PF01479 S4 domain M2J83_20510 PF00411 Ribosomal protein S11 M2J83_20515 PF00416 Ribosomal protein S13/S18 M2J83_20520 PF00444 Ribosomal protein L36 M2J83_20525 PF01176 Translation initiation factor 1A / IF-1 M2J83_20530 PF00344 SecY translocase M2J83_20535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M2J83_20540 PF00327 Ribosomal protein L30p/L7e M2J83_20545 PF03719 Ribosomal protein S5, C-terminal domain M2J83_20545 PF00333 Ribosomal protein S5, N-terminal domain M2J83_20550 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M2J83_20555 PF00347 Ribosomal protein L6 M2J83_20560 PF00410 Ribosomal protein S8 M2J83_20565 PF00253 Ribosomal protein S14p/S29e M2J83_20570 PF00673 ribosomal L5P family C-terminus M2J83_20570 PF00281 Ribosomal protein L5 M2J83_20575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M2J83_20580 PF00238 Ribosomal protein L14p/L23e M2J83_20620 PF00529 HlyD membrane-fusion protein of T1SS M2J83_20625 PF00005 ABC transporter M2J83_20625 PF03412 Peptidase C39 family M2J83_20625 PF00664 ABC transporter transmembrane region M2J83_20635 PF02321 Outer membrane efflux protein M2J83_20640 PF00171 Aldehyde dehydrogenase family M2J83_20650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_20650 PF09317 Domain of unknown function (DUF1974) M2J83_20650 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_20650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_20655 PF00108 Thiolase, N-terminal domain M2J83_20655 PF02803 Thiolase, C-terminal domain M2J83_20660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M2J83_20660 PF00378 Enoyl-CoA hydratase/isomerase M2J83_20660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M2J83_20665 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M2J83_20680 PF00501 AMP-binding enzyme M2J83_20680 PF13193 AMP-binding enzyme C-terminal domain M2J83_20685 PF00667 FAD binding domain M2J83_20685 PF00175 Oxidoreductase NAD-binding domain M2J83_20685 PF00258 Flavodoxin M2J83_20690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M2J83_20690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M2J83_20695 PF10414 Sirohaem synthase dimerisation region M2J83_20695 PF14824 Sirohaem biosynthesis protein central M2J83_20695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2J83_20700 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_20710 PF00005 ABC transporter M2J83_20715 PF02770 Acyl-CoA dehydrogenase, middle domain M2J83_20715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M2J83_20715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M2J83_20725 PF12833 Helix-turn-helix domain M2J83_20725 PF12852 Cupin M2J83_20730 PF00366 Ribosomal protein S17 M2J83_20735 PF00831 Ribosomal L29 protein M2J83_20740 PF00252 Ribosomal protein L16p/L10e M2J83_20745 PF07650 KH domain M2J83_20745 PF00189 Ribosomal protein S3, C-terminal domain M2J83_20750 PF00237 Ribosomal protein L22p/L17e M2J83_20755 PF00203 Ribosomal protein S19 M2J83_20760 PF00181 Ribosomal Proteins L2, RNA binding domain M2J83_20760 PF03947 Ribosomal Proteins L2, C-terminal domain M2J83_20765 PF00276 Ribosomal protein L23 M2J83_20770 PF00573 Ribosomal protein L4/L1 family M2J83_20775 PF00297 Ribosomal protein L3 M2J83_20780 PF00571 CBS domain M2J83_20780 PF00005 ABC transporter M2J83_20785 PF00528 Binding-protein-dependent transport system inner membrane component M2J83_20790 PF00338 Ribosomal protein S10p/S20e M2J83_20795 PF03144 Elongation factor Tu domain 2 M2J83_20795 PF03143 Elongation factor Tu C-terminal domain M2J83_20795 PF00009 Elongation factor Tu GTP binding domain M2J83_20800 PF03764 Elongation factor G, domain IV M2J83_20800 PF00009 Elongation factor Tu GTP binding domain M2J83_20800 PF03144 Elongation factor Tu domain 2 M2J83_20800 PF00679 Elongation factor G C-terminus M2J83_20800 PF14492 Elongation Factor G, domain II M2J83_20805 PF00177 Ribosomal protein S7p/S5e M2J83_20810 PF00164 Ribosomal protein S12/S23 M2J83_20815 PF00486 Transcriptional regulatory protein, C terminal M2J83_20815 PF00072 Response regulator receiver domain M2J83_20825 PF00672 HAMP domain M2J83_20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2J83_20825 PF00512 His Kinase A (phospho-acceptor) domain M2J83_20840 PF00127 Copper binding proteins, plastocyanin/azurin family M2J83_20845 PF04997 RNA polymerase Rpb1, domain 1 M2J83_20845 PF00623 RNA polymerase Rpb1, domain 2 M2J83_20845 PF04983 RNA polymerase Rpb1, domain 3 M2J83_20845 PF04998 RNA polymerase Rpb1, domain 5 M2J83_20845 PF05000 RNA polymerase Rpb1, domain 4 M2J83_20850 PF04563 RNA polymerase beta subunit M2J83_20850 PF04560 RNA polymerase Rpb2, domain 7 M2J83_20850 PF00562 RNA polymerase Rpb2, domain 6 M2J83_20850 PF10385 RNA polymerase beta subunit external 1 domain M2J83_20850 PF04561 RNA polymerase Rpb2, domain 2 M2J83_20850 PF04565 RNA polymerase Rpb2, domain 3 M2J83_20855 PF16320 Ribosomal protein L7/L12 dimerisation domain M2J83_20855 PF00542 Ribosomal protein L7/L12 C-terminal domain M2J83_20860 PF00466 Ribosomal protein L10 M2J83_20865 PF00687 Ribosomal protein L1p/L10e family M2J83_20870 PF03946 Ribosomal protein L11, N-terminal domain M2J83_20870 PF00298 Ribosomal protein L11, RNA binding domain M2J83_20875 PF00467 KOW motif M2J83_20875 PF02357 Transcription termination factor nusG M2J83_20910 PF17762 HTH domain found in ParB protein M2J83_20910 PF02195 ParB-like nuclease domain M2J83_20915 PF13614 AAA domain M2J83_20920 PF02527 rRNA small subunit methyltransferase G M2J83_20925 PF13932 GidA associated domain M2J83_20925 PF01134 Glucose inhibited division protein A M2J83_20930 PF00155 Aminotransferase class I and II M2J83_20940 PF00149 Calcineurin-like phosphoesterase M2J83_20945 PF00990 Diguanylate cyclase, GGDEF domain M2J83_20950 PF02666 Phosphatidylserine decarboxylase M2J83_20960 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_20960 PF13291 ACT domain M2J83_20970 PF02567 Phenazine biosynthesis-like protein M2J83_21010 PF01381 Helix-turn-helix M2J83_21035 PF01555 DNA methylase M2J83_21055 PF00271 Helicase conserved C-terminal domain M2J83_21055 PF00176 SNF2 family N-terminal domain M2J83_21070 PF00589 Phage integrase family M2J83_21070 PF13356 Arm DNA-binding domain M2J83_21075 PF10396 GTP-binding protein TrmE N-terminus M2J83_21075 PF12631 MnmE helical domain M2J83_21075 PF01926 50S ribosome-binding GTPase M2J83_21080 PF01381 Helix-turn-helix M2J83_21080 PF07883 Cupin domain M2J83_21085 PF01546 Peptidase family M20/M25/M40 M2J83_21085 PF07687 Peptidase dimerisation domain M2J83_21090 PF00291 Pyridoxal-phosphate dependent enzyme M2J83_21095 PF02423 Ornithine cyclodeaminase/mu-crystallin family M2J83_21110 PF00199 Catalase M2J83_21110 PF06628 Catalase-related immune-responsive M2J83_21115 PF14849 YidC periplasmic domain M2J83_21115 PF02096 60Kd inner membrane protein M2J83_21120 PF01809 Putative membrane protein insertion efficiency factor M2J83_21125 PF00825 Ribonuclease P M2J83_21130 PF00468 Ribosomal protein L34 M2J83_21155 PF01381 Helix-turn-helix M2J83_21170 PF12615 F sex factor protein N terminal M2J83_21170 PF10412 Type IV secretion-system coupling protein DNA-binding domain M2J83_21175 PF18340 DNA relaxase TraI 2B/2B-like domain M2J83_21175 PF18272 single-stranded DNA binding TraI N-terminal subdomain M2J83_21175 PF07057 DNA helicase TraI M2J83_21175 PF18340 DNA relaxase TraI 2B/2B-like domain M2J83_21175 PF08751 TrwC relaxase M2J83_21175 PF18272 single-stranded DNA binding TraI N-terminal subdomain M2J83_21175 PF07057 DNA helicase TraI M2J83_21175 PF08751 TrwC relaxase M2J83_21225 PF00239 Resolvase, N terminal domain M2J83_21225 PF02796 Helix-turn-helix domain of resolvase M2J83_21240 PF00239 Resolvase, N terminal domain M2J83_21240 PF02796 Helix-turn-helix domain of resolvase M2J83_21245 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ M2J83_21250 PF04221 RelB antitoxin M2J83_21255 PF13614 AAA domain