locus-tag class description CLH39_00005 IPR016185 Pre-ATP-grasp domain superfamily CLH39_00005 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLH39_00005 IPR011054 Rudiment single hybrid motif CLH39_00005 IPR000089 Biotin/lipoyl attachment CLH39_00005 IPR005482 Biotin carboxylase, C-terminal CLH39_00005 IPR011761 ATP-grasp fold CLH39_00005 IPR011053 Single hybrid motif CLH39_00005 IPR005481 Biotin carboxylase-like, N-terminal domain CLH39_00005 IPR001882 Biotin-binding site CLH39_00005 IPR011764 Biotin carboxylation domain CLH39_00025 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CLH39_00025 IPR006171 TOPRIM domain CLH39_00025 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLH39_00025 IPR005738 DNA topoisomerase III CLH39_00025 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CLH39_00025 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLH39_00025 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLH39_00025 IPR013497 DNA topoisomerase, type IA, central CLH39_00025 IPR023406 DNA topoisomerase, type IA, active site CLH39_00025 IPR003601 DNA topoisomerase, type IA, domain 2 CLH39_00025 IPR000380 DNA topoisomerase, type IA CLH39_00025 IPR023405 DNA topoisomerase, type IA, core domain CLH39_00040 IPR010917 TonB-dependent receptor, conserved site CLH39_00040 IPR039426 Vitamin B12 transporter BtuB-like CLH39_00040 IPR012910 TonB-dependent receptor, plug domain CLH39_00040 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_00040 IPR010916 TonB box, conserved site CLH39_00040 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_00040 IPR010105 TonB-dependent siderophore receptor CLH39_00040 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_00045 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLH39_00045 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLH39_00055 IPR004681 TRAP transporter large membrane protein DctM CLH39_00055 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_00065 IPR004682 TRAP transporter solute receptor, DctP family CLH39_00065 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_00065 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_00070 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLH39_00070 IPR012846 Acetolactate synthase, large subunit, biosynthetic CLH39_00070 IPR000399 TPP-binding enzyme, conserved site CLH39_00070 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLH39_00070 IPR012000 Thiamine pyrophosphate enzyme, central domain CLH39_00070 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CLH39_00070 IPR039368 Acetolactate synthase large subunit, TPP binding domain CLH39_00070 IPR029061 Thiamin diphosphate-binding fold CLH39_00085 IPR004681 TRAP transporter large membrane protein DctM CLH39_00085 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_00090 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_00090 IPR004682 TRAP transporter solute receptor, DctP family CLH39_00090 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_00100 IPR035994 Nucleoside phosphorylase superfamily CLH39_00100 IPR000845 Nucleoside phosphorylase domain CLH39_00100 IPR018953 AMP nucleoside phosphorylase, N-terminal CLH39_00100 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily CLH39_00100 IPR011271 AMP nucleosidase CLH39_00105 IPR006253 Malate synthase G CLH39_00105 IPR011076 Malate synthase-like superfamily CLH39_00105 IPR023310 Malate synthase G, beta sub-domain CLH39_00105 IPR001465 Malate synthase CLH39_00115 IPR011867 Molybdate ABC transporter, permease protein CLH39_00115 IPR035906 MetI-like superfamily CLH39_00115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_00120 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CLH39_00120 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CLH39_00120 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CLH39_00120 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CLH39_00120 IPR013785 Aldolase-type TIM barrel CLH39_00120 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CLH39_00120 IPR006242 Putative pyrophosphorylase ModD CLH39_00125 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00125 IPR005119 LysR, substrate-binding CLH39_00125 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00125 IPR000847 Transcription regulator HTH, LysR CLH39_00140 IPR009057 Homeobox-like domain superfamily CLH39_00140 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CLH39_00140 IPR020449 Transcription regulator HTH, AraC- type CLH39_00140 IPR018060 DNA binding HTH domain, AraC-type CLH39_00140 IPR018062 HTH domain AraC-type, conserved site CLH39_00150 IPR019912 FMN reductase, MsuE-like CLH39_00150 IPR005025 NADPH-dependent FMN reductase-like CLH39_00150 IPR029039 Flavoprotein-like superfamily CLH39_00155 IPR011251 Luciferase-like domain CLH39_00155 IPR036661 Luciferase-like domain superfamily CLH39_00155 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent CLH39_00170 IPR004872 Lipoprotein NlpA family CLH39_00175 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A CLH39_00175 IPR036661 Luciferase-like domain superfamily CLH39_00175 IPR011251 Luciferase-like domain CLH39_00180 IPR004872 Lipoprotein NlpA family CLH39_00185 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_00185 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_00185 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CLH39_00185 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_00185 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_00185 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_00190 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_00190 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_00190 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_00190 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CLH39_00190 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_00195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_00195 IPR035906 MetI-like superfamily CLH39_00200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00200 IPR018449 NIL domain CLH39_00200 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CLH39_00200 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CLH39_00200 IPR003593 AAA+ ATPase domain CLH39_00200 IPR003439 ABC transporter-like CLH39_00200 IPR026253 Methionine import ATP-binding protein MetN CLH39_00200 IPR017871 ABC transporter, conserved site CLH39_00205 IPR004872 Lipoprotein NlpA family CLH39_00210 IPR004872 Lipoprotein NlpA family CLH39_00225 IPR005814 Aminotransferase class-III CLH39_00225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_00225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_00225 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_00225 IPR004636 Acetylornithine/Succinylornithine transaminase family CLH39_00230 IPR017961 DNA polymerase, Y-family, little finger domain CLH39_00230 IPR001126 UmuC domain CLH39_00230 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CLH39_00230 IPR022880 DNA polymerase IV CLH39_00235 IPR039424 Solute-binding protein family 5 CLH39_00235 IPR000914 Solute-binding protein family 5 domain CLH39_00235 IPR030678 Peptide/nickel binding protein, MppA-type CLH39_00240 IPR035906 MetI-like superfamily CLH39_00240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_00245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_00245 IPR035906 MetI-like superfamily CLH39_00245 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLH39_00250 IPR003439 ABC transporter-like CLH39_00250 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLH39_00250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00250 IPR017871 ABC transporter, conserved site CLH39_00250 IPR003593 AAA+ ATPase domain CLH39_00255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00255 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLH39_00255 IPR003593 AAA+ ATPase domain CLH39_00255 IPR003439 ABC transporter-like CLH39_00255 IPR017871 ABC transporter, conserved site CLH39_00260 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_00260 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_00260 IPR007627 RNA polymerase sigma-70 region 2 CLH39_00260 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00260 IPR013325 RNA polymerase sigma factor, region 2 CLH39_00260 IPR014284 RNA polymerase sigma-70 like domain CLH39_00260 IPR039425 RNA polymerase sigma-70 like CLH39_00260 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLH39_00270 IPR012910 TonB-dependent receptor, plug domain CLH39_00270 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_00270 IPR039423 TonB-dependent receptor-like CLH39_00270 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_00270 IPR010917 TonB-dependent receptor, conserved site CLH39_00270 IPR010105 TonB-dependent siderophore receptor CLH39_00270 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_00275 IPR003190 Aspartate decarboxylase CLH39_00275 IPR009010 Aspartate decarboxylase-like domain superfamily CLH39_00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00285 IPR017871 ABC transporter, conserved site CLH39_00285 IPR003439 ABC transporter-like CLH39_00285 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_00285 IPR003593 AAA+ ATPase domain CLH39_00290 IPR012349 FMN-binding split barrel CLH39_00290 IPR002563 Flavin reductase like domain CLH39_00295 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CLH39_00295 IPR018060 DNA binding HTH domain, AraC-type CLH39_00295 IPR018062 HTH domain AraC-type, conserved site CLH39_00295 IPR009057 Homeobox-like domain superfamily CLH39_00295 IPR037923 Transcription regulator HTH-like CLH39_00305 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00305 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00305 IPR002563 Flavin reductase like domain CLH39_00305 IPR012349 FMN-binding split barrel CLH39_00315 IPR036291 NAD(P)-binding domain superfamily CLH39_00315 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_00315 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_00335 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_00335 IPR004681 TRAP transporter large membrane protein DctM CLH39_00350 IPR036291 NAD(P)-binding domain superfamily CLH39_00350 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_00350 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_00350 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_00365 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC CLH39_00365 IPR042099 AMP-dependent synthetase-like superfamily CLH39_00365 IPR020845 AMP-binding, conserved site CLH39_00365 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_00365 IPR000873 AMP-dependent synthetase/ligase CLH39_00370 IPR017641 Benzoate 1,2-dioxygenase, small subunit CLH39_00370 IPR032710 NTF2-like domain superfamily CLH39_00370 IPR000391 Ring-hydroxylating dioxygenase beta subunit CLH39_00375 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_00375 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CLH39_00375 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CLH39_00375 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_00375 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_00375 IPR017639 Benzoate 1,2-dioxygenase, large subunit CLH39_00380 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_00380 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_00380 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_00380 IPR039003 Carnitine monooxygenase reductase subunit CLH39_00380 IPR017938 Riboflavin synthase-like beta-barrel CLH39_00380 IPR000951 Phthalate dioxygenase reductase CLH39_00380 IPR012675 Beta-grasp domain superfamily CLH39_00380 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_00380 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_00380 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_00380 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_00385 IPR037175 Kynurenine formamidase superfamily CLH39_00385 IPR007325 Kynurenine formamidase/cyclase-like CLH39_00390 IPR003010 Carbon-nitrogen hydrolase CLH39_00390 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_00390 IPR000132 Nitrilase/cyanide hydratase, conserved site CLH39_00395 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLH39_00395 IPR011234 Fumarylacetoacetase-like, C-terminal CLH39_00400 IPR011051 RmlC-like cupin domain superfamily CLH39_00400 IPR013096 Cupin 2, conserved barrel CLH39_00400 IPR014710 RmlC-like jelly roll fold CLH39_00405 IPR002938 FAD-binding domain CLH39_00405 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_00410 IPR029069 HotDog domain superfamily CLH39_00410 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CLH39_00415 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00415 IPR023187 Transcriptional regulator MarR-type, conserved site CLH39_00415 IPR000835 MarR-type HTH domain CLH39_00415 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00430 IPR023187 Transcriptional regulator MarR-type, conserved site CLH39_00430 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00430 IPR012712 HTH-type transcriptional regulator HpaR/FarR CLH39_00430 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00430 IPR000835 MarR-type HTH domain CLH39_00440 IPR032506 Domain of unknown function DUF4976 CLH39_00440 IPR000917 Sulfatase, N-terminal CLH39_00440 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLH39_00465 IPR005064 Bordetella uptake gene CLH39_00465 IPR042100 Bordetella uptake gene, domain 1 CLH39_00470 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLH39_00470 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLH39_00470 IPR036627 CobW-like, C-terminal domain superfamily CLH39_00470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00475 IPR000620 EamA domain CLH39_00485 IPR042100 Bordetella uptake gene, domain 1 CLH39_00485 IPR005064 Bordetella uptake gene CLH39_00490 IPR011060 Ribulose-phosphate binding barrel CLH39_00490 IPR026286 Maleate isomerase/Arylmalonate decarboxylase CLH39_00495 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_00495 IPR029045 ClpP/crotonase-like domain superfamily CLH39_00495 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_00500 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00500 IPR000524 Transcription regulator HTH, GntR CLH39_00500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_00500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_00500 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_00500 IPR004839 Aminotransferase, class I/classII CLH39_00500 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00505 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLH39_00505 IPR000073 Alpha/beta hydrolase fold-1 CLH39_00505 IPR000089 Biotin/lipoyl attachment CLH39_00505 IPR011053 Single hybrid motif CLH39_00505 IPR029058 Alpha/Beta hydrolase fold CLH39_00515 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_00515 IPR020845 AMP-binding, conserved site CLH39_00515 IPR000873 AMP-dependent synthetase/ligase CLH39_00520 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_00520 IPR003439 ABC transporter-like CLH39_00520 IPR003593 AAA+ ATPase domain CLH39_00520 IPR017871 ABC transporter, conserved site CLH39_00520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00525 IPR001851 ABC transporter, permease CLH39_00525 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CLH39_00530 IPR001851 ABC transporter, permease CLH39_00540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_00540 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_00540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_00540 IPR004839 Aminotransferase, class I/classII CLH39_00545 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLH39_00545 IPR010169 Acetylornithine deacetylase ArgE CLH39_00545 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_00545 IPR002933 Peptidase M20 CLH39_00545 IPR011650 Peptidase M20, dimerisation domain CLH39_00550 IPR036259 MFS transporter superfamily CLH39_00550 IPR011701 Major facilitator superfamily CLH39_00550 IPR020846 Major facilitator superfamily domain CLH39_00555 IPR002299 Porin, Neisseria sp. type CLH39_00555 IPR001702 Porin, Gram-negative type CLH39_00555 IPR023614 Porin domain superfamily CLH39_00555 IPR033900 Porin domain, Gram-negative type CLH39_00560 IPR011711 GntR, C-terminal CLH39_00560 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_00560 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00560 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00560 IPR000524 Transcription regulator HTH, GntR CLH39_00565 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_00565 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_00565 IPR041722 Alpha-keto acid binding periplasmic protein CLH39_00565 IPR026289 Solute binding protein, TakP-like CLH39_00565 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_00575 IPR000847 Transcription regulator HTH, LysR CLH39_00575 IPR005119 LysR, substrate-binding CLH39_00575 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00575 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00580 IPR036291 NAD(P)-binding domain superfamily CLH39_00580 IPR000506 Ketol-acid reductoisomerase, C-terminal CLH39_00580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_00580 IPR013023 Ketol-acid reductoisomerase CLH39_00580 IPR013116 Ketol-acid reductoisomerase, N-terminal CLH39_00580 IPR014359 Ketol-acid reductoisomerase, prokaryotic CLH39_00585 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_00585 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_00585 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_00590 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_00590 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_00590 IPR000951 Phthalate dioxygenase reductase CLH39_00590 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_00590 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_00590 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_00590 IPR017938 Riboflavin synthase-like beta-barrel CLH39_00590 IPR012675 Beta-grasp domain superfamily CLH39_00590 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_00590 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_00600 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_00600 IPR004681 TRAP transporter large membrane protein DctM CLH39_00605 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_00605 IPR000524 Transcription regulator HTH, GntR CLH39_00605 IPR036390 Winged helix DNA-binding domain superfamily CLH39_00605 IPR011711 GntR, C-terminal CLH39_00605 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_00610 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B CLH39_00610 IPR023753 FAD/NAD(P)-binding domain CLH39_00610 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_00610 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CLH39_00610 IPR007419 BFD-like [2Fe-2S]-binding domain CLH39_00620 IPR006076 FAD dependent oxidoreductase CLH39_00620 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_00620 IPR012727 Glycine oxidase ThiO CLH39_00640 IPR013785 Aldolase-type TIM barrel CLH39_00640 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLH39_00640 IPR020625 Schiff base-forming aldolase, active site CLH39_00640 IPR002220 DapA-like CLH39_00640 IPR020624 Schiff base-forming aldolase, conserved site CLH39_00645 IPR033900 Porin domain, Gram-negative type CLH39_00645 IPR023614 Porin domain superfamily CLH39_00645 IPR002299 Porin, Neisseria sp. type CLH39_00645 IPR001702 Porin, Gram-negative type CLH39_00670 IPR004681 TRAP transporter large membrane protein DctM CLH39_00670 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_00685 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_00685 IPR036986 RNA-binding S4 domain superfamily CLH39_00685 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLH39_00685 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLH39_00685 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLH39_00685 IPR002942 RNA-binding S4 domain CLH39_00685 IPR006145 Pseudouridine synthase, RsuA/RluA CLH39_00690 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLH39_00690 IPR001241 DNA topoisomerase, type IIA CLH39_00690 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLH39_00690 IPR018522 DNA topoisomerase, type IIA, conserved site CLH39_00690 IPR006171 TOPRIM domain CLH39_00690 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_00690 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_00690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_00690 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_00690 IPR041423 DNA gyrase subunit B insert domain CLH39_00690 IPR011557 DNA gyrase, subunit B CLH39_00690 IPR002288 DNA gyrase B subunit, C-terminal CLH39_00690 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CLH39_00690 IPR034160 DNA gyrase subunit B, TOPRIM domain CLH39_00695 IPR001001 DNA polymerase III, beta sliding clamp CLH39_00695 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CLH39_00695 IPR022637 DNA polymerase III, beta sliding clamp, central CLH39_00695 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CLH39_00700 IPR020591 Chromosomal replication control, initiator DnaA-like CLH39_00700 IPR024633 DnaA N-terminal domain CLH39_00700 IPR038454 DnaA, N-terminal domain superfamily CLH39_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00700 IPR010921 Trp repressor/replication initiator CLH39_00700 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CLH39_00700 IPR001957 Chromosomal replication control, initiator DnaA CLH39_00700 IPR013159 Chromosomal replication initiator, DnaA C-terminal CLH39_00700 IPR013317 Chromosomal replication initiator protein DnaA CLH39_00700 IPR003593 AAA+ ATPase domain CLH39_00705 IPR000271 Ribosomal protein L34 CLH39_00705 IPR020939 Ribosomal protein L34, conserved site CLH39_00710 IPR020539 Ribonuclease P, conserved site CLH39_00710 IPR000100 Ribonuclease P CLH39_00710 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_00710 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_00715 IPR002696 Putative membrane protein insertion efficiency factor CLH39_00720 IPR038221 YidC, periplasmic domain superfamily CLH39_00720 IPR038210 Membrane insertase YidC, periplasmic domain CLH39_00720 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CLH39_00720 IPR028053 Membrane insertase YidC, N-terminal CLH39_00720 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CLH39_00720 IPR019998 Membrane insertase YidC CLH39_00725 IPR011614 Catalase core domain CLH39_00725 IPR020835 Catalase superfamily CLH39_00725 IPR040333 Catalase, clade 3 CLH39_00725 IPR018028 Catalase, mono-functional, haem-containing CLH39_00725 IPR037060 Catalase core domain superfamily CLH39_00725 IPR002226 Catalase haem-binding site CLH39_00725 IPR010582 Catalase immune-responsive domain CLH39_00725 IPR024708 Catalase active site CLH39_00725 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CLH39_00745 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_00745 IPR002938 FAD-binding domain CLH39_00750 IPR000868 Isochorismatase-like CLH39_00750 IPR036380 Isochorismatase-like superfamily CLH39_00760 IPR000073 Alpha/beta hydrolase fold-1 CLH39_00760 IPR029058 Alpha/Beta hydrolase fold CLH39_00765 IPR017871 ABC transporter, conserved site CLH39_00765 IPR003593 AAA+ ATPase domain CLH39_00765 IPR003439 ABC transporter-like CLH39_00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00765 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_00770 IPR017871 ABC transporter, conserved site CLH39_00770 IPR003593 AAA+ ATPase domain CLH39_00770 IPR003439 ABC transporter-like CLH39_00770 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_00770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00780 IPR001851 ABC transporter, permease CLH39_00785 IPR000709 Leu/Ile/Val-binding protein CLH39_00785 IPR028082 Periplasmic binding protein-like I CLH39_00785 IPR028081 Leucine-binding protein domain CLH39_00800 IPR003462 Ornithine cyclodeaminase/mu-crystallin CLH39_00800 IPR023401 Ornithine cyclodeaminase, N-terminal CLH39_00800 IPR036291 NAD(P)-binding domain superfamily CLH39_00805 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_00805 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_00810 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_00810 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLH39_00810 IPR010169 Acetylornithine deacetylase ArgE CLH39_00810 IPR011650 Peptidase M20, dimerisation domain CLH39_00810 IPR002933 Peptidase M20 CLH39_00815 IPR001387 Cro/C1-type helix-turn-helix domain CLH39_00815 IPR013096 Cupin 2, conserved barrel CLH39_00815 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_00815 IPR014710 RmlC-like jelly roll fold CLH39_00815 IPR011051 RmlC-like cupin domain superfamily CLH39_00820 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLH39_00820 IPR031168 TrmE-type guanine nucleotide-binding domain CLH39_00820 IPR005225 Small GTP-binding protein domain CLH39_00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00820 IPR025867 MnmE, helical domain CLH39_00820 IPR027368 tRNA modification GTPase MnmE domain 2 CLH39_00820 IPR004520 tRNA modification GTPase MnmE CLH39_00820 IPR006073 GTP binding domain CLH39_00820 IPR018948 GTP-binding protein TrmE, N-terminal CLH39_00840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_00840 IPR018117 DNA methylase, C-5 cytosine-specific, active site CLH39_00840 IPR001525 C-5 cytosine methyltransferase CLH39_00840 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CLH39_00845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_00845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_00845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_00845 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_00845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_00845 IPR005467 Histidine kinase domain CLH39_00855 IPR004603 DNA mismatch endonuclease vsr CLH39_00855 IPR011335 Restriction endonuclease type II-like CLH39_00905 IPR003719 Phenazine biosynthesis PhzF protein CLH39_00915 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLH39_00915 IPR002912 ACT domain CLH39_00915 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_00915 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_00915 IPR005789 Threonine dehydratase, catabolic CLH39_00925 IPR033177 Phosphatidylserine decarboxylase CLH39_00925 IPR003817 Phosphatidylserine decarboxylase-related CLH39_00925 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CLH39_00935 IPR012292 Globin/Protoglobin CLH39_00935 IPR009050 Globin-like superfamily CLH39_00935 IPR000160 GGDEF domain CLH39_00935 IPR039435 Diguanylate cyclase DosC, globin sensor domain CLH39_00935 IPR029787 Nucleotide cyclase CLH39_00940 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLH39_00940 IPR029052 Metallo-dependent phosphatase-like CLH39_00940 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE CLH39_00940 IPR041780 PrpE-like, metallophosphatase domain CLH39_00940 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase CLH39_00945 IPR004839 Aminotransferase, class I/classII CLH39_00945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_00945 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_00945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_00950 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CLH39_00950 IPR026904 GidA associated domain 3 CLH39_00950 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_00950 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CLH39_00950 IPR020595 MnmG-related, conserved site CLH39_00955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_00955 IPR003682 rRNA small subunit methyltransferase G CLH39_00960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00960 IPR025669 AAA domain CLH39_00965 IPR003115 ParB/Sulfiredoxin CLH39_00965 IPR036086 ParB/Sulfiredoxin superfamily CLH39_00965 IPR004437 ParB/RepB/Spo0J partition protein CLH39_00965 IPR041468 ParB/Spo0J, HTH domain CLH39_00990 IPR033720 Elongation factor Tu, domain 2 CLH39_00990 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_00990 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CLH39_00990 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_00990 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLH39_00990 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLH39_00990 IPR031157 Tr-type G domain, conserved site CLH39_00990 IPR000795 Transcription factor, GTP-binding domain CLH39_00990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_00990 IPR005225 Small GTP-binding protein domain CLH39_00990 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLH39_01005 IPR006645 NusG, N-terminal CLH39_01005 IPR036735 NusG, N-terminal domain superfamily CLH39_01005 IPR008991 Translation protein SH3-like domain superfamily CLH39_01005 IPR005824 KOW CLH39_01005 IPR001062 Transcription antitermination protein, NusG CLH39_01005 IPR014722 Ribosomal protein L2, domain 2 CLH39_01005 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CLH39_01010 IPR020784 Ribosomal protein L11, N-terminal CLH39_01010 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CLH39_01010 IPR020785 Ribosomal protein L11, conserved site CLH39_01010 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CLH39_01010 IPR000911 Ribosomal protein L11/L12 CLH39_01010 IPR020783 Ribosomal protein L11, C-terminal CLH39_01010 IPR006519 Ribosomal protein L11, bacterial-type CLH39_01015 IPR023673 Ribosomal protein L1, conserved site CLH39_01015 IPR005878 Ribosomal protein L1, bacterial-type CLH39_01015 IPR002143 Ribosomal protein L1 CLH39_01015 IPR023674 Ribosomal protein L1-like CLH39_01015 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CLH39_01015 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CLH39_01020 IPR002363 Ribosomal protein L10, eubacterial, conserved site CLH39_01020 IPR001790 Ribosomal protein L10P CLH39_01020 IPR022973 Ribosomal protein L10 CLH39_01025 IPR000206 Ribosomal protein L7/L12 CLH39_01025 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CLH39_01025 IPR008932 Ribosomal protein L7/L12, oligomerisation CLH39_01025 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLH39_01025 IPR013823 Ribosomal protein L7/L12, C-terminal CLH39_01030 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CLH39_01030 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CLH39_01030 IPR007645 RNA polymerase Rpb2, domain 3 CLH39_01030 IPR007641 RNA polymerase Rpb2, domain 7 CLH39_01030 IPR014724 RNA polymerase Rpb2, OB-fold CLH39_01030 IPR007642 RNA polymerase Rpb2, domain 2 CLH39_01030 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CLH39_01030 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CLH39_01030 IPR015712 DNA-directed RNA polymerase, subunit 2 CLH39_01030 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CLH39_01030 IPR007644 RNA polymerase, beta subunit, protrusion CLH39_01030 IPR007121 RNA polymerase, beta subunit, conserved site CLH39_01035 IPR000722 RNA polymerase, alpha subunit CLH39_01035 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CLH39_01035 IPR007081 RNA polymerase Rpb1, domain 5 CLH39_01035 IPR007083 RNA polymerase Rpb1, domain 4 CLH39_01035 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CLH39_01035 IPR007066 RNA polymerase Rpb1, domain 3 CLH39_01035 IPR007080 RNA polymerase Rpb1, domain 1 CLH39_01035 IPR006592 RNA polymerase, N-terminal CLH39_01035 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CLH39_01040 IPR008972 Cupredoxin CLH39_01040 IPR000923 Blue (type 1) copper domain CLH39_01040 IPR014068 Azurin CLH39_01040 IPR028871 Blue (type 1) copper protein, binding site CLH39_01055 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_01055 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_01055 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_01055 IPR005467 Histidine kinase domain CLH39_01055 IPR003660 HAMP domain CLH39_01055 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_01055 IPR006290 Heavy metal sensor kinase CLH39_01055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_01065 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_01065 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01065 IPR039420 Transcriptional regulatory protein WalR-like CLH39_01065 IPR001789 Signal transduction response regulator, receiver domain CLH39_01065 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_01065 IPR011006 CheY-like superfamily CLH39_01070 IPR006032 Ribosomal protein S12/S23 CLH39_01070 IPR012340 Nucleic acid-binding, OB-fold CLH39_01070 IPR005679 Ribosomal protein S12, bacterial-type CLH39_01075 IPR036823 Ribosomal protein S7 domain superfamily CLH39_01075 IPR023798 Ribosomal protein S7 domain CLH39_01075 IPR005717 Ribosomal protein S7, bacterial/organellar-type CLH39_01075 IPR020606 Ribosomal protein S7, conserved site CLH39_01075 IPR000235 Ribosomal protein S5/S7 CLH39_01080 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_01080 IPR035647 EF-G domain III/V-like CLH39_01080 IPR035649 EFG, domain V CLH39_01080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01080 IPR005225 Small GTP-binding protein domain CLH39_01080 IPR000640 Elongation factor EFG, domain V-like CLH39_01080 IPR005517 Translation elongation factor EFG/EF2, domain IV CLH39_01080 IPR004540 Translation elongation factor EFG/EF2 CLH39_01080 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_01080 IPR031157 Tr-type G domain, conserved site CLH39_01080 IPR000795 Transcription factor, GTP-binding domain CLH39_01080 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_01080 IPR041095 Elongation Factor G, domain II CLH39_01080 IPR009022 Elongation factor G, domain III CLH39_01080 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_01085 IPR005225 Small GTP-binding protein domain CLH39_01085 IPR031157 Tr-type G domain, conserved site CLH39_01085 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CLH39_01085 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLH39_01085 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_01085 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLH39_01085 IPR033720 Elongation factor Tu, domain 2 CLH39_01085 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLH39_01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01085 IPR000795 Transcription factor, GTP-binding domain CLH39_01085 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_01090 IPR001848 Ribosomal protein S10 CLH39_01090 IPR018268 Ribosomal protein S10, conserved site CLH39_01090 IPR027486 Ribosomal protein S10 domain CLH39_01090 IPR036838 Ribosomal protein S10 domain superfamily CLH39_01095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_01095 IPR035906 MetI-like superfamily CLH39_01100 IPR017871 ABC transporter, conserved site CLH39_01100 IPR003439 ABC transporter-like CLH39_01100 IPR000644 CBS domain CLH39_01100 IPR003593 AAA+ ATPase domain CLH39_01100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01100 IPR005892 Glycine betaine transport ATP-binding subunit CLH39_01105 IPR019927 Ribosomal protein L3, bacterial/organelle-type CLH39_01105 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_01105 IPR019926 Ribosomal protein L3, conserved site CLH39_01105 IPR000597 Ribosomal protein L3 CLH39_01110 IPR023574 Ribosomal protein L4 domain superfamily CLH39_01110 IPR002136 Ribosomal protein L4/L1e CLH39_01110 IPR013005 50S ribosomal protein uL4 CLH39_01115 IPR012678 Ribosomal protein L23/L15e core domain superfamily CLH39_01115 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLH39_01115 IPR013025 Ribosomal protein L25/L23 CLH39_01120 IPR008991 Translation protein SH3-like domain superfamily CLH39_01120 IPR014726 Ribosomal protein L2, domain 3 CLH39_01120 IPR002171 Ribosomal protein L2 CLH39_01120 IPR005880 Ribosomal protein L2, bacterial/organellar-type CLH39_01120 IPR022669 Ribosomal protein L2, C-terminal CLH39_01120 IPR022671 Ribosomal protein L2, conserved site CLH39_01120 IPR012340 Nucleic acid-binding, OB-fold CLH39_01120 IPR014722 Ribosomal protein L2, domain 2 CLH39_01120 IPR022666 Ribosomal Proteins L2, RNA binding domain CLH39_01125 IPR005732 Ribosomal protein S19, bacterial-type CLH39_01125 IPR020934 Ribosomal protein S19 conserved site CLH39_01125 IPR023575 Ribosomal protein S19, superfamily CLH39_01125 IPR002222 Ribosomal protein S19/S15 CLH39_01130 IPR036394 Ribosomal protein L22/L17 superfamily CLH39_01130 IPR018260 Ribosomal protein L22/L17, conserved site CLH39_01130 IPR001063 Ribosomal protein L22/L17 CLH39_01130 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CLH39_01135 IPR004087 K Homology domain CLH39_01135 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CLH39_01135 IPR001351 Ribosomal protein S3, C-terminal CLH39_01135 IPR005704 Ribosomal protein S3, bacterial-type CLH39_01135 IPR018280 Ribosomal protein S3, conserved site CLH39_01135 IPR004044 K Homology domain, type 2 CLH39_01135 IPR015946 K homology domain-like, alpha/beta CLH39_01135 IPR009019 K homology domain superfamily, prokaryotic type CLH39_01140 IPR016180 Ribosomal protein L10e/L16 CLH39_01140 IPR036920 Ribosomal protein L10e/L16 superfamily CLH39_01140 IPR000114 Ribosomal protein L16 CLH39_01140 IPR020798 Ribosomal protein L16, conserved site CLH39_01145 IPR036049 Ribosomal protein L29/L35 superfamily CLH39_01145 IPR018254 Ribosomal protein L29, conserved site CLH39_01145 IPR001854 Ribosomal protein L29/L35 CLH39_01150 IPR012340 Nucleic acid-binding, OB-fold CLH39_01150 IPR019984 30S ribosomal protein S17 CLH39_01150 IPR000266 Ribosomal protein S17/S11 CLH39_01150 IPR019979 Ribosomal protein S17, conserved site CLH39_01155 IPR032783 AraC-type transcription regulator, ligand-binding domain CLH39_01155 IPR009057 Homeobox-like domain superfamily CLH39_01155 IPR018060 DNA binding HTH domain, AraC-type CLH39_01155 IPR018062 HTH domain AraC-type, conserved site CLH39_01165 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_01165 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_01165 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_01165 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_01165 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_01165 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_01165 IPR006089 Acyl-CoA dehydrogenase, conserved site CLH39_01170 IPR017871 ABC transporter, conserved site CLH39_01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01170 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CLH39_01170 IPR003439 ABC transporter-like CLH39_01170 IPR003593 AAA+ ATPase domain CLH39_01180 IPR035906 MetI-like superfamily CLH39_01180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_01180 IPR005889 Nitrate transport permease CLH39_01185 IPR028281 Siroheme synthase, central domain CLH39_01185 IPR036291 NAD(P)-binding domain superfamily CLH39_01185 IPR006366 Uroporphyrin-III C-methyltransferase CLH39_01185 IPR014776 Tetrapyrrole methylase, subdomain 2 CLH39_01185 IPR014777 Tetrapyrrole methylase, subdomain 1 CLH39_01185 IPR000878 Tetrapyrrole methylase CLH39_01185 IPR035996 Tetrapyrrole methylase superfamily CLH39_01185 IPR006367 Sirohaem synthase, N-terminal CLH39_01185 IPR019478 Sirohaem synthase, dimerisation domain CLH39_01185 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLH39_01185 IPR012409 Sirohaem synthase CLH39_01190 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CLH39_01190 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CLH39_01190 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CLH39_01190 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CLH39_01190 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CLH39_01195 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_01195 IPR001094 Flavodoxin-like CLH39_01195 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLH39_01195 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CLH39_01195 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CLH39_01195 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_01195 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_01195 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CLH39_01195 IPR029039 Flavoprotein-like superfamily CLH39_01195 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CLH39_01195 IPR017938 Riboflavin synthase-like beta-barrel CLH39_01195 IPR008254 Flavodoxin/nitric oxide synthase CLH39_01200 IPR042099 AMP-dependent synthetase-like superfamily CLH39_01200 IPR000873 AMP-dependent synthetase/ligase CLH39_01200 IPR020845 AMP-binding, conserved site CLH39_01200 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_01215 IPR042117 OMPP1/FadL/TodX superfamily CLH39_01215 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CLH39_01220 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_01220 IPR012802 Fatty oxidation complex, alpha subunit FadJ CLH39_01220 IPR029045 ClpP/crotonase-like domain superfamily CLH39_01220 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_01220 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_01220 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLH39_01220 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLH39_01220 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CLH39_01220 IPR036291 NAD(P)-binding domain superfamily CLH39_01225 IPR012805 Acetyl-CoA C-acyltransferase FadA CLH39_01225 IPR020610 Thiolase, active site CLH39_01225 IPR002155 Thiolase CLH39_01225 IPR016039 Thiolase-like CLH39_01225 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_01225 IPR020616 Thiolase, N-terminal CLH39_01225 IPR020613 Thiolase, conserved site CLH39_01225 IPR020617 Thiolase, C-terminal CLH39_01230 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_01230 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_01230 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_01230 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_01230 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_01230 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CLH39_01230 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_01240 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_01240 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_01240 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_01240 IPR015590 Aldehyde dehydrogenase domain CLH39_01245 IPR003423 Outer membrane efflux protein CLH39_01245 IPR010130 Type I secretion outer membrane protein, TolC CLH39_01255 IPR011527 ABC transporter type 1, transmembrane domain CLH39_01255 IPR003593 AAA+ ATPase domain CLH39_01255 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_01255 IPR003439 ABC transporter-like CLH39_01255 IPR039395 Peptidase C39-like A CLH39_01255 IPR039421 Type I protein exporter CLH39_01255 IPR005074 Peptidase C39, bacteriocin processing CLH39_01255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01255 IPR017871 ABC transporter, conserved site CLH39_01255 IPR010132 ATPase, type I secretion system, HlyB CLH39_01260 IPR010129 Type I secretion membrane fusion protein, HlyD family CLH39_01260 IPR006144 Secretion protein HlyD, conserved site CLH39_01285 IPR036853 Ribosomal protein L14 superfamily CLH39_01285 IPR000218 Ribosomal protein L14P CLH39_01285 IPR005745 Ribosomal protein L14P, bacterial-type CLH39_01285 IPR019972 Ribosomal protein L14P, conserved site CLH39_01290 IPR014722 Ribosomal protein L2, domain 2 CLH39_01290 IPR041988 Ribosomal Protein L26/L24, KOW domain CLH39_01290 IPR005825 Ribosomal protein L24/L26, conserved site CLH39_01290 IPR003256 Ribosomal protein L24 CLH39_01290 IPR008991 Translation protein SH3-like domain superfamily CLH39_01295 IPR020930 Ribosomal protein L5, bacterial-type CLH39_01295 IPR031310 Ribosomal protein L5, N-terminal CLH39_01295 IPR020929 Ribosomal protein L5, conserved site CLH39_01295 IPR031309 Ribosomal protein L5, C-terminal CLH39_01295 IPR002132 Ribosomal protein L5 CLH39_01295 IPR022803 Ribosomal protein L5 domain superfamily CLH39_01300 IPR023036 Ribosomal protein S14, bacterial/plastid CLH39_01300 IPR001209 Ribosomal protein S14 CLH39_01305 IPR035987 Ribosomal protein S8 superfamily CLH39_01305 IPR000630 Ribosomal protein S8 CLH39_01310 IPR019906 Ribosomal protein L6, bacterial-type CLH39_01310 IPR002358 Ribosomal protein L6, conserved site CLH39_01310 IPR020040 Ribosomal protein L6, alpha-beta domain CLH39_01310 IPR000702 Ribosomal protein L6 CLH39_01310 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CLH39_01315 IPR004389 Ribosomal protein L18, bacterial-type CLH39_01315 IPR005484 Ribosomal protein L18 CLH39_01320 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_01320 IPR005712 Ribosomal protein S5, bacterial-type CLH39_01320 IPR005324 Ribosomal protein S5, C-terminal CLH39_01320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_01320 IPR018192 Ribosomal protein S5, N-terminal, conserved site CLH39_01320 IPR013810 Ribosomal protein S5, N-terminal CLH39_01320 IPR000851 Ribosomal protein S5 CLH39_01325 IPR018038 Ribosomal protein L30, conserved site CLH39_01325 IPR005996 Ribosomal protein L30, bacterial-type CLH39_01325 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLH39_01325 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CLH39_01330 IPR005749 Ribosomal protein L15, bacterial-type CLH39_01330 IPR030878 Ribosomal protein L15 CLH39_01330 IPR021131 Ribosomal protein L18e/L15P CLH39_01330 IPR036227 Ribosomal L18e/L15P superfamily CLH39_01335 IPR023201 SecY domain superfamily CLH39_01335 IPR030659 SecY conserved site CLH39_01335 IPR002208 SecY/SEC61-alpha family CLH39_01335 IPR026593 Protein translocase subunit SecY CLH39_01340 IPR012340 Nucleic acid-binding, OB-fold CLH39_01340 IPR022967 RNA-binding domain, S1 CLH39_01340 IPR004368 Translation initiation factor IF-1 CLH39_01340 IPR006196 RNA-binding domain, S1, IF1 type CLH39_01345 IPR000473 Ribosomal protein L36 CLH39_01345 IPR035977 Ribosomal protein L36 superfamily CLH39_01350 IPR001892 Ribosomal protein S13 CLH39_01350 IPR027437 30s ribosomal protein S13, C-terminal CLH39_01350 IPR018269 Ribosomal protein S13, conserved site CLH39_01350 IPR019980 Ribosomal protein S13, bacterial-type CLH39_01350 IPR010979 Ribosomal protein S13-like, H2TH CLH39_01355 IPR001971 Ribosomal protein S11 CLH39_01355 IPR019981 Ribosomal protein S11, bacterial-type CLH39_01355 IPR018102 Ribosomal S11, conserved site CLH39_01355 IPR036967 Ribosomal protein S11 superfamily CLH39_01360 IPR018079 Ribosomal protein S4, conserved site CLH39_01360 IPR036986 RNA-binding S4 domain superfamily CLH39_01360 IPR022801 Ribosomal protein S4/S9 CLH39_01360 IPR001912 Ribosomal protein S4/S9, N-terminal CLH39_01360 IPR005709 Ribosomal protein S4, bacterial-type CLH39_01360 IPR002942 RNA-binding S4 domain CLH39_01365 IPR011262 DNA-directed RNA polymerase, insert domain CLH39_01365 IPR011773 DNA-directed RNA polymerase, alpha subunit CLH39_01365 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CLH39_01365 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CLH39_01365 IPR036603 RNA polymerase, RBP11-like subunit CLH39_01365 IPR011260 RNA polymerase, alpha subunit, C-terminal CLH39_01370 IPR036373 Ribosomal protein L17 superfamily CLH39_01370 IPR000456 Ribosomal protein L17 CLH39_01375 IPR019914 Pyrimidine monooxygenase RutA CLH39_01375 IPR036661 Luciferase-like domain superfamily CLH39_01375 IPR011251 Luciferase-like domain CLH39_01385 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CLH39_01385 IPR009057 Homeobox-like domain superfamily CLH39_01385 IPR018060 DNA binding HTH domain, AraC-type CLH39_01385 IPR018062 HTH domain AraC-type, conserved site CLH39_01390 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLH39_01390 IPR004323 Divalent ion tolerance protein, CutA CLH39_01390 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria CLH39_01390 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLH39_01395 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CLH39_01395 IPR013766 Thioredoxin domain CLH39_01395 IPR017937 Thioredoxin, conserved site CLH39_01395 IPR036249 Thioredoxin-like superfamily CLH39_01395 IPR022910 Thiol:disulphide interchange protein DsbD CLH39_01395 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CLH39_01395 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CLH39_01395 IPR035671 DsbD gamma CLH39_01400 IPR030656 Delta-aminolevulinic acid dehydratase, active site CLH39_01400 IPR013785 Aldolase-type TIM barrel CLH39_01400 IPR001731 Delta-aminolevulinic acid dehydratase CLH39_01405 IPR030393 EngB-type guanine nucleotide-binding (G) domain CLH39_01405 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CLH39_01405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01405 IPR006073 GTP binding domain CLH39_01410 IPR008168 Cytochrome c, class IC CLH39_01410 IPR009056 Cytochrome c-like domain CLH39_01410 IPR036909 Cytochrome c-like domain superfamily CLH39_01410 IPR024167 Cytochrome c4-like CLH39_01415 IPR007816 ResB-like domain CLH39_01415 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB CLH39_01420 IPR002541 Cytochrome c assembly protein CLH39_01420 IPR017562 Cytochrome c-type biogenesis protein CcsA CLH39_01425 IPR013656 PAS fold-4 CLH39_01425 IPR035965 PAS domain superfamily CLH39_01425 IPR000014 PAS domain CLH39_01425 IPR000160 GGDEF domain CLH39_01425 IPR029787 Nucleotide cyclase CLH39_01425 IPR001633 EAL domain CLH39_01425 IPR035919 EAL domain superfamily CLH39_01430 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLH39_01430 IPR029066 PLP-binding barrel CLH39_01430 IPR002986 Diaminopimelate decarboxylase, LysA CLH39_01430 IPR000183 Ornithine/DAP/Arg decarboxylase CLH39_01430 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CLH39_01430 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CLH39_01430 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CLH39_01440 IPR036950 Penicillin binding protein transglycosylase domain CLH39_01440 IPR023346 Lysozyme-like domain superfamily CLH39_01440 IPR001264 Glycosyl transferase, family 51 CLH39_01440 IPR012338 Beta-lactamase/transpeptidase-like CLH39_01440 IPR001460 Penicillin-binding protein, transpeptidase CLH39_01440 IPR031376 Penicillin-binding protein, OB-like domain CLH39_01445 IPR023000 Shikimate kinase, conserved site CLH39_01445 IPR000623 Shikimate kinase/Threonine synthase-like 1 CLH39_01445 IPR031322 Shikimate kinase/gluconokinase CLH39_01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01450 IPR030963 3-dehydroquinate synthase family CLH39_01450 IPR030960 3-dehydroquinate synthase domain CLH39_01450 IPR016037 3-dehydroquinate synthase AroB CLH39_01455 IPR006261 dNTP triphosphohydrolase CLH39_01455 IPR003607 HD/PDEase domain CLH39_01455 IPR026875 Phosphohydrolase-associated domain CLH39_01455 IPR023023 dNTP triphosphohydrolase, type 2 CLH39_01455 IPR006674 HD domain CLH39_01460 IPR017871 ABC transporter, conserved site CLH39_01460 IPR041552 UvrA DNA-binding domain CLH39_01460 IPR004602 UvrABC system subunit A CLH39_01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_01460 IPR003439 ABC transporter-like CLH39_01460 IPR041102 UvrA, interaction domain CLH39_01465 IPR011701 Major facilitator superfamily CLH39_01465 IPR020846 Major facilitator superfamily domain CLH39_01465 IPR036259 MFS transporter superfamily CLH39_01470 IPR011344 Single-stranded DNA-binding protein CLH39_01470 IPR000424 Primosome PriB/single-strand DNA-binding CLH39_01470 IPR012340 Nucleic acid-binding, OB-fold CLH39_01475 IPR012910 TonB-dependent receptor, plug domain CLH39_01475 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_01475 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_01475 IPR039423 TonB-dependent receptor-like CLH39_01475 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_01475 IPR010917 TonB-dependent receptor, conserved site CLH39_01475 IPR010105 TonB-dependent siderophore receptor CLH39_01475 IPR011662 Secretin/TonB, short N-terminal domain CLH39_01480 IPR032623 FecR, N-terminal CLH39_01480 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CLH39_01480 IPR006860 FecR protein CLH39_01485 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_01485 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01485 IPR039425 RNA polymerase sigma-70 like CLH39_01485 IPR014284 RNA polymerase sigma-70 like domain CLH39_01485 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLH39_01485 IPR013325 RNA polymerase sigma factor, region 2 CLH39_01485 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_01485 IPR007627 RNA polymerase sigma-70 region 2 CLH39_01490 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01490 IPR036390 Winged helix DNA-binding domain superfamily CLH39_01490 IPR000524 Transcription regulator HTH, GntR CLH39_01490 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_01490 IPR011711 GntR, C-terminal CLH39_01495 IPR011234 Fumarylacetoacetase-like, C-terminal CLH39_01495 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLH39_01500 IPR005064 Bordetella uptake gene CLH39_01500 IPR042100 Bordetella uptake gene, domain 1 CLH39_01505 IPR006175 YjgF/YER057c/UK114 family CLH39_01505 IPR035959 RutC-like superfamily CLH39_01505 IPR019897 RidA, conserved site CLH39_01505 IPR006056 RidA family CLH39_01510 IPR036259 MFS transporter superfamily CLH39_01510 IPR020846 Major facilitator superfamily domain CLH39_01510 IPR011701 Major facilitator superfamily CLH39_01520 IPR009040 Ferritin-like diiron domain CLH39_01520 IPR008331 Ferritin/DPS protein domain CLH39_01520 IPR009078 Ferritin-like superfamily CLH39_01520 IPR012347 Ferritin-like CLH39_01520 IPR002024 Bacterioferritin CLH39_01525 IPR036259 MFS transporter superfamily CLH39_01525 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLH39_01525 IPR011701 Major facilitator superfamily CLH39_01525 IPR004734 Multidrug resistance protein CLH39_01525 IPR020846 Major facilitator superfamily domain CLH39_01530 IPR009057 Homeobox-like domain superfamily CLH39_01530 IPR001647 DNA-binding HTH domain, TetR-type CLH39_01530 IPR041347 MftR, C-terminal CLH39_01530 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLH39_01535 IPR000524 Transcription regulator HTH, GntR CLH39_01535 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_01535 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01535 IPR036390 Winged helix DNA-binding domain superfamily CLH39_01535 IPR000485 AsnC-type HTH domain CLH39_01535 IPR011711 GntR, C-terminal CLH39_01560 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_01560 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_01560 IPR015590 Aldehyde dehydrogenase domain CLH39_01560 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_01560 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_01560 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_01565 IPR005624 Haem-degrading CLH39_01565 IPR038084 GlcG-like domain superfamily CLH39_01570 IPR017938 Riboflavin synthase-like beta-barrel CLH39_01570 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_01570 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_01570 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_01570 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_01570 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_01570 IPR012675 Beta-grasp domain superfamily CLH39_01570 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_01570 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_01590 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_01590 IPR012675 Beta-grasp domain superfamily CLH39_01590 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_01590 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_01590 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_01590 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_01590 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F CLH39_01590 IPR017938 Riboflavin synthase-like beta-barrel CLH39_01590 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_01590 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLH39_01595 IPR023401 Ornithine cyclodeaminase, N-terminal CLH39_01595 IPR036291 NAD(P)-binding domain superfamily CLH39_01595 IPR003462 Ornithine cyclodeaminase/mu-crystallin CLH39_01615 IPR001279 Metallo-beta-lactamase CLH39_01615 IPR022712 Beta-Casp domain CLH39_01615 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLH39_01615 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CLH39_01620 IPR000387 Tyrosine specific protein phosphatases domain CLH39_01620 IPR016130 Protein-tyrosine phosphatase, active site CLH39_01620 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CLH39_01620 IPR029021 Protein-tyrosine phosphatase-like CLH39_01625 IPR000796 Aspartate/other aminotransferase CLH39_01625 IPR004839 Aminotransferase, class I/classII CLH39_01625 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLH39_01625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_01625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_01625 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_01630 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01630 IPR036390 Winged helix DNA-binding domain superfamily CLH39_01630 IPR000847 Transcription regulator HTH, LysR CLH39_01630 IPR005119 LysR, substrate-binding CLH39_01630 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 CLH39_01635 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_01635 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_01635 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_01640 IPR000971 Globin CLH39_01640 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_01640 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLH39_01640 IPR017938 Riboflavin synthase-like beta-barrel CLH39_01640 IPR023950 Flavohemoprotein CLH39_01640 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_01640 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_01640 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_01640 IPR009050 Globin-like superfamily CLH39_01640 IPR012292 Globin/Protoglobin CLH39_01645 IPR005119 LysR, substrate-binding CLH39_01645 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01645 IPR036390 Winged helix DNA-binding domain superfamily CLH39_01645 IPR000847 Transcription regulator HTH, LysR CLH39_01650 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_01650 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_01650 IPR004046 Glutathione S-transferase, C-terminal CLH39_01650 IPR036249 Thioredoxin-like superfamily CLH39_01650 IPR004045 Glutathione S-transferase, N-terminal CLH39_01675 IPR020846 Major facilitator superfamily domain CLH39_01675 IPR011701 Major facilitator superfamily CLH39_01675 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLH39_01675 IPR036259 MFS transporter superfamily CLH39_01680 IPR000551 MerR-type HTH domain CLH39_01680 IPR009061 Putative DNA-binding domain superfamily CLH39_01680 IPR011789 Cu(I)-responsive transcriptional regulator CLH39_01690 IPR000847 Transcription regulator HTH, LysR CLH39_01690 IPR036390 Winged helix DNA-binding domain superfamily CLH39_01690 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01690 IPR005119 LysR, substrate-binding CLH39_01695 IPR011701 Major facilitator superfamily CLH39_01695 IPR036259 MFS transporter superfamily CLH39_01695 IPR020846 Major facilitator superfamily domain CLH39_01710 IPR011663 UbiC transcription regulator-associated CLH39_01710 IPR000524 Transcription regulator HTH, GntR CLH39_01710 IPR010248 Histidine utilization repressor CLH39_01710 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLH39_01710 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01710 IPR036390 Winged helix DNA-binding domain superfamily CLH39_01715 IPR035400 Urocanase, N-terminal domain CLH39_01715 IPR036190 Urocanase superfamily CLH39_01715 IPR035401 Urocanase, C-terminal domain CLH39_01715 IPR038364 Urocanase, central domain superfamily CLH39_01715 IPR023636 Urocanase conserved site CLH39_01715 IPR023637 Urocanase CLH39_01715 IPR035085 Urocanase, Rossmann-like domain CLH39_01720 IPR024083 Fumarase/histidase, N-terminal CLH39_01720 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CLH39_01720 IPR008948 L-Aspartase-like CLH39_01720 IPR005921 Histidine ammonia-lyase CLH39_01720 IPR001106 Aromatic amino acid lyase CLH39_01730 IPR018117 DNA methylase, C-5 cytosine-specific, active site CLH39_01730 IPR001525 C-5 cytosine methyltransferase CLH39_01730 IPR001387 Cro/C1-type helix-turn-helix domain CLH39_01730 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_01730 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CLH39_01730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_01740 IPR006680 Amidohydrolase-related CLH39_01740 IPR005920 Imidazolonepropionase CLH39_01740 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_01740 IPR032466 Metal-dependent hydrolase CLH39_01750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_01750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_01750 IPR004839 Aminotransferase, class I/classII CLH39_01750 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_01755 IPR006370 4-hydroxybenzoate polyprenyltransferase-like CLH39_01755 IPR030470 UbiA prenyltransferase conserved site CLH39_01755 IPR000537 UbiA prenyltransferase family CLH39_01755 IPR039653 Prenyltransferase CLH39_01775 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLH39_01775 IPR006195 Aminoacyl-tRNA synthetase, class II CLH39_01775 IPR004524 Aspartate-tRNA ligase, type 1 CLH39_01775 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLH39_01775 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLH39_01775 IPR029351 GAD domain CLH39_01775 IPR012340 Nucleic acid-binding, OB-fold CLH39_01775 IPR004115 GAD-like domain superfamily CLH39_01780 IPR005135 Endonuclease/exonuclease/phosphatase CLH39_01780 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CLH39_01785 IPR001736 Phospholipase D/Transphosphatidylase CLH39_01785 IPR030872 Cardiolipin synthase B CLH39_01785 IPR025202 Phospholipase D-like domain CLH39_01790 IPR011032 GroES-like superfamily CLH39_01790 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_01790 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLH39_01790 IPR014183 Alcohol dehydrogenase class III CLH39_01790 IPR013149 Alcohol dehydrogenase, C-terminal CLH39_01790 IPR036291 NAD(P)-binding domain superfamily CLH39_01795 IPR029058 Alpha/Beta hydrolase fold CLH39_01795 IPR014186 S-formylglutathione hydrolase CLH39_01795 IPR000801 Putative esterase CLH39_01800 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_01800 IPR009042 RNA polymerase sigma-70 region 1.2 CLH39_01800 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CLH39_01800 IPR007627 RNA polymerase sigma-70 region 2 CLH39_01800 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01800 IPR000943 RNA polymerase sigma-70 CLH39_01800 IPR014284 RNA polymerase sigma-70 like domain CLH39_01800 IPR013325 RNA polymerase sigma factor, region 2 CLH39_01800 IPR007630 RNA polymerase sigma-70 region 4 CLH39_01805 IPR010917 TonB-dependent receptor, conserved site CLH39_01805 IPR039426 Vitamin B12 transporter BtuB-like CLH39_01805 IPR010105 TonB-dependent siderophore receptor CLH39_01805 IPR012910 TonB-dependent receptor, plug domain CLH39_01805 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_01805 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_01805 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_01815 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CLH39_01815 IPR038770 Sodium/solute symporter superfamily CLH39_01815 IPR018422 Cation/H+ exchanger, CPA1 family CLH39_01815 IPR006153 Cation/H+ exchanger CLH39_01820 IPR006369 Protohaem IX farnesyltransferase CLH39_01820 IPR030470 UbiA prenyltransferase conserved site CLH39_01820 IPR000537 UbiA prenyltransferase family CLH39_01825 IPR023755 Heme A synthase, type 1 CLH39_01825 IPR003780 COX15/CtaA family CLH39_01845 IPR000298 Cytochrome c oxidase subunit III-like CLH39_01845 IPR033945 Cytochrome c oxidase subunit III domain CLH39_01845 IPR024791 Cytochrome c oxidase subunit III CLH39_01845 IPR035973 Cytochrome c oxidase subunit III-like superfamily CLH39_01845 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CLH39_01855 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLH39_01855 IPR000883 Cytochrome c oxidase subunit I CLH39_01855 IPR014241 Cytochrome c oxidase, subunit I bacterial type CLH39_01855 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLH39_01855 IPR033944 Cytochrome c oxidase subunit I domain CLH39_01855 IPR023616 Cytochrome c oxidase-like, subunit I domain CLH39_01860 IPR014222 Cytochrome c oxidase, subunit II CLH39_01860 IPR008972 Cupredoxin CLH39_01860 IPR001505 Copper centre Cu(A) CLH39_01860 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CLH39_01860 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CLH39_01860 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CLH39_01875 IPR018357 Hexapeptide transferase, conserved site CLH39_01875 IPR001451 Hexapeptide repeat CLH39_01875 IPR038009 GlmU, C-terminal LbH domain CLH39_01875 IPR011004 Trimeric LpxA-like superfamily CLH39_01875 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CLH39_01875 IPR025877 MobA-like NTP transferase CLH39_01875 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_01885 IPR036390 Winged helix DNA-binding domain superfamily CLH39_01885 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLH39_01885 IPR011008 Dimeric alpha-beta barrel CLH39_01885 IPR019888 Transcription regulator AsnC-type CLH39_01885 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01885 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLH39_01885 IPR000485 AsnC-type HTH domain CLH39_01890 IPR029055 Nucleophile aminohydrolases, N-terminal CLH39_01890 IPR035490 GlmS/FrlB, SIS domain 2 CLH39_01890 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CLH39_01890 IPR001347 Sugar isomerase (SIS) CLH39_01890 IPR017932 Glutamine amidotransferase type 2 domain CLH39_01890 IPR035466 GlmS/AgaS, SIS domain 1 CLH39_01900 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLH39_01900 IPR017814 Mycothiol biosynthesis protein, MshA CLH39_01900 IPR001296 Glycosyl transferase, family 1 CLH39_01905 IPR011051 RmlC-like cupin domain superfamily CLH39_01905 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CLH39_01905 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CLH39_01905 IPR005835 Nucleotidyl transferase domain CLH39_01905 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_01905 IPR014710 RmlC-like jelly roll fold CLH39_01910 IPR005888 dTDP-glucose 4,6-dehydratase CLH39_01910 IPR016040 NAD(P)-binding domain CLH39_01910 IPR036291 NAD(P)-binding domain superfamily CLH39_01915 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLH39_01915 IPR002797 Polysaccharide biosynthesis protein CLH39_01935 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_01935 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CLH39_01935 IPR005835 Nucleotidyl transferase domain CLH39_01940 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CLH39_01940 IPR014710 RmlC-like jelly roll fold CLH39_01940 IPR011051 RmlC-like cupin domain superfamily CLH39_01945 IPR036291 NAD(P)-binding domain superfamily CLH39_01945 IPR005913 dTDP-4-dehydrorhamnose reductase family CLH39_01945 IPR029903 RmlD-like substrate binding domain CLH39_01960 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_01960 IPR013325 RNA polymerase sigma factor, region 2 CLH39_01960 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_01960 IPR007627 RNA polymerase sigma-70 region 2 CLH39_01960 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLH39_01960 IPR014284 RNA polymerase sigma-70 like domain CLH39_01960 IPR039425 RNA polymerase sigma-70 like CLH39_01960 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_01970 IPR010105 TonB-dependent siderophore receptor CLH39_01970 IPR011662 Secretin/TonB, short N-terminal domain CLH39_01970 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_01970 IPR012910 TonB-dependent receptor, plug domain CLH39_01970 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_01970 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_01970 IPR039423 TonB-dependent receptor-like CLH39_01970 IPR010917 TonB-dependent receptor, conserved site CLH39_01990 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CLH39_01990 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLH39_01990 IPR039697 Iron-type alcohol dehydrogenase-like CLH39_02000 IPR005119 LysR, substrate-binding CLH39_02000 IPR000847 Transcription regulator HTH, LysR CLH39_02000 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02000 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02005 IPR006439 HAD hydrolase, subfamily IA CLH39_02005 IPR041492 Haloacid dehalogenase-like hydrolase CLH39_02005 IPR023214 HAD superfamily CLH39_02005 IPR006323 Phosphonoacetaldehyde hydrolase CLH39_02005 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLH39_02005 IPR036412 HAD-like superfamily CLH39_02010 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_02010 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_02010 IPR003593 AAA+ ATPase domain CLH39_02010 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_02010 IPR003018 GAF domain CLH39_02010 IPR025944 Sigma-54 interaction domain, conserved site CLH39_02010 IPR009057 Homeobox-like domain superfamily CLH39_02010 IPR002197 DNA binding HTH domain, Fis-type CLH39_02010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02010 IPR029016 GAF-like domain superfamily CLH39_02015 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_02015 IPR020946 Flavin monooxygenase-like CLH39_02020 IPR007055 BON domain CLH39_02020 IPR014004 Transport-associated and nodulation domain, bacteria CLH39_02025 IPR036629 YjbJ superfamily CLH39_02025 IPR026042 Stress response protein YjbJ CLH39_02025 IPR008462 CsbD-like domain CLH39_02030 IPR000847 Transcription regulator HTH, LysR CLH39_02030 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02030 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02030 IPR005119 LysR, substrate-binding CLH39_02035 IPR012093 Pirin CLH39_02035 IPR011051 RmlC-like cupin domain superfamily CLH39_02035 IPR014710 RmlC-like jelly roll fold CLH39_02035 IPR003829 Pirin, N-terminal domain CLH39_02035 IPR008778 Pirin, C-terminal domain CLH39_02040 IPR000868 Isochorismatase-like CLH39_02040 IPR036380 Isochorismatase-like superfamily CLH39_02045 IPR000868 Isochorismatase-like CLH39_02045 IPR036380 Isochorismatase-like superfamily CLH39_02050 IPR011051 RmlC-like cupin domain superfamily CLH39_02050 IPR012093 Pirin CLH39_02050 IPR008778 Pirin, C-terminal domain CLH39_02050 IPR003829 Pirin, N-terminal domain CLH39_02050 IPR014710 RmlC-like jelly roll fold CLH39_02060 IPR036291 NAD(P)-binding domain superfamily CLH39_02060 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_02060 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_02060 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_02065 IPR005829 Sugar transporter, conserved site CLH39_02065 IPR036292 Proline/betaine transporter ProP, C-terminal CLH39_02065 IPR015041 Osmosensory transporter coiled coil CLH39_02065 IPR004736 MFS transporter, metabolite:H symporter CLH39_02065 IPR036259 MFS transporter superfamily CLH39_02065 IPR005828 Major facilitator, sugar transporter-like CLH39_02065 IPR020846 Major facilitator superfamily domain CLH39_02070 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02070 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02070 IPR000847 Transcription regulator HTH, LysR CLH39_02070 IPR005119 LysR, substrate-binding CLH39_02075 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_02075 IPR023100 D-aminoacylase, insert domain superfamily CLH39_02075 IPR013108 Amidohydrolase 3 CLH39_02075 IPR032466 Metal-dependent hydrolase CLH39_02085 IPR012338 Beta-lactamase/transpeptidase-like CLH39_02085 IPR000871 Beta-lactamase, class-A CLH39_02085 IPR023650 Beta-lactamase, class-A active site CLH39_02090 IPR003010 Carbon-nitrogen hydrolase CLH39_02090 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_02090 IPR001110 Uncharacterised protein family UPF0012, conserved site CLH39_02100 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted CLH39_02100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_02100 IPR025714 Methyltransferase domain CLH39_02105 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CLH39_02105 IPR000160 GGDEF domain CLH39_02105 IPR029787 Nucleotide cyclase CLH39_02110 IPR036008 Aconitase, iron-sulfur domain CLH39_02110 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CLH39_02110 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLH39_02110 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CLH39_02110 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLH39_02110 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLH39_02115 IPR020846 Major facilitator superfamily domain CLH39_02115 IPR011701 Major facilitator superfamily CLH39_02115 IPR036259 MFS transporter superfamily CLH39_02120 IPR036812 NADP-dependent oxidoreductase domain superfamily CLH39_02120 IPR023210 NADP-dependent oxidoreductase domain CLH39_02120 IPR020471 Aldo/keto reductase CLH39_02120 IPR018170 Aldo/keto reductase, conserved site CLH39_02125 IPR003700 Ketopantoate hydroxymethyltransferase CLH39_02125 IPR040442 Pyruvate kinase-like domain superfamily CLH39_02125 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_02130 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02130 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02130 IPR000847 Transcription regulator HTH, LysR CLH39_02130 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain CLH39_02130 IPR005119 LysR, substrate-binding CLH39_02145 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like CLH39_02145 IPR017485 Tryptophan 2,3-dioxygenase, bacterial CLH39_02145 IPR004981 Tryptophan 2,3-dioxygenase CLH39_02150 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLH39_02150 IPR011008 Dimeric alpha-beta barrel CLH39_02150 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02150 IPR000485 AsnC-type HTH domain CLH39_02150 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02150 IPR011991 ArsR-like helix-turn-helix domain CLH39_02150 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLH39_02150 IPR019888 Transcription regulator AsnC-type CLH39_02155 IPR011711 GntR, C-terminal CLH39_02155 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_02155 IPR000524 Transcription regulator HTH, GntR CLH39_02155 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02155 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02160 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CLH39_02160 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CLH39_02160 IPR037237 IlvD/EDD, N-terminal domain CLH39_02160 IPR004404 Dihydroxy-acid dehydratase CLH39_02160 IPR042096 Dihydroxy-acid dehydratase, C-terminal CLH39_02165 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLH39_02165 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLH39_02165 IPR036291 NAD(P)-binding domain superfamily CLH39_02165 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLH39_02165 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_02165 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_02165 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLH39_02175 IPR036291 NAD(P)-binding domain superfamily CLH39_02175 IPR001509 NAD-dependent epimerase/dehydratase CLH39_02180 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_02180 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_02180 IPR026289 Solute binding protein, TakP-like CLH39_02180 IPR041721 Lactate-binding periplasmic protein TTHA0766 CLH39_02180 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_02190 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_02190 IPR004681 TRAP transporter large membrane protein DctM CLH39_02200 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLH39_02200 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLH39_02200 IPR036291 NAD(P)-binding domain superfamily CLH39_02215 IPR005669 Thiosulphate/Sulfate-binding protein CLH39_02215 IPR034408 Sulphate/thiosulphate-binding site CLH39_02215 IPR000957 Sulphate/thiosulphate-binding, conserved site CLH39_02220 IPR005667 Sulphate ABC transporter permease protein 2 CLH39_02220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_02220 IPR011865 Sulphate ABC transporter, permease protein CysT CLH39_02220 IPR035906 MetI-like superfamily CLH39_02225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_02225 IPR011866 Sulphate ABC transporter, permease protein CysW CLH39_02225 IPR035906 MetI-like superfamily CLH39_02225 IPR005667 Sulphate ABC transporter permease protein 2 CLH39_02230 IPR007481 Stringent starvation protein B CLH39_02230 IPR036760 SspB-like superfamily CLH39_02235 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_02235 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_02235 IPR036249 Thioredoxin-like superfamily CLH39_02235 IPR040079 Glutathione Transferase family CLH39_02235 IPR004045 Glutathione S-transferase, N-terminal CLH39_02235 IPR004046 Glutathione S-transferase, C-terminal CLH39_02235 IPR034341 Stringent starvation protein A, N-terminal CLH39_02240 IPR036909 Cytochrome c-like domain superfamily CLH39_02240 IPR009056 Cytochrome c-like domain CLH39_02240 IPR002326 Cytochrome c1 CLH39_02245 IPR036150 Cytochrome b/b6, C-terminal domain superfamily CLH39_02245 IPR030689 Cytochrome b CLH39_02245 IPR016174 Di-haem cytochrome, transmembrane CLH39_02245 IPR005798 Cytochrome b/b6, C-terminal CLH39_02245 IPR005797 Cytochrome b/b6, N-terminal CLH39_02245 IPR027387 Cytochrome b/b6-like domain superfamily CLH39_02250 IPR014349 Rieske iron-sulphur protein CLH39_02250 IPR005805 Rieske iron-sulphur protein, C-terminal CLH39_02250 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CLH39_02250 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_02250 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CLH39_02250 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_02255 IPR036019 Gated mechanosensitive channel CLH39_02255 IPR001185 Large-conductance mechanosensitive channel CLH39_02255 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CLH39_02260 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLH39_02260 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CLH39_02265 IPR001940 Peptidase S1C CLH39_02265 IPR001478 PDZ domain CLH39_02265 IPR011782 Peptidase S1C, Do CLH39_02265 IPR036034 PDZ superfamily CLH39_02265 IPR009003 Peptidase S1, PA clan CLH39_02270 IPR002033 Sec-independent periplasmic protein translocase TatC CLH39_02270 IPR019820 Sec-independent periplasmic protein translocase, conserved site CLH39_02275 IPR003369 Sec-independent protein translocase protein TatA/B/E CLH39_02275 IPR018448 Twin-arginine translocation protein TatB CLH39_02280 IPR003369 Sec-independent protein translocase protein TatA/B/E CLH39_02280 IPR006312 Sec-independent protein translocase protein TatA/E CLH39_02285 IPR019808 Histidine triad, conserved site CLH39_02285 IPR001310 Histidine triad (HIT) protein CLH39_02285 IPR011146 HIT-like domain CLH39_02285 IPR036265 HIT-like superfamily CLH39_02290 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CLH39_02290 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CLH39_02295 IPR026660 Phosphoribosyl-AMP cyclohydrolase CLH39_02295 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CLH39_02295 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CLH39_02300 IPR011060 Ribulose-phosphate binding barrel CLH39_02300 IPR004651 Histidine biosynthesis, HisF CLH39_02300 IPR013785 Aldolase-type TIM barrel CLH39_02300 IPR006062 Histidine biosynthesis CLH39_02305 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CLH39_02305 IPR013785 Aldolase-type TIM barrel CLH39_02305 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CLH39_02305 IPR006062 Histidine biosynthesis CLH39_02305 IPR011060 Ribulose-phosphate binding barrel CLH39_02310 IPR017926 Glutamine amidotransferase CLH39_02310 IPR010139 Imidazole glycerol phosphate synthase, subunit H CLH39_02310 IPR029062 Class I glutamine amidotransferase-like CLH39_02315 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CLH39_02315 IPR000807 Imidazoleglycerol-phosphate dehydratase CLH39_02315 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CLH39_02315 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_02320 IPR022695 Histidinol dehydrogenase, monofunctional CLH39_02320 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_02320 IPR012131 Histidinol dehydrogenase CLH39_02320 IPR001692 Histidinol dehydrogenase, conserved site CLH39_02325 IPR013820 ATP phosphoribosyltransferase, catalytic domain CLH39_02325 IPR018198 ATP phosphoribosyltransferase, conserved site CLH39_02325 IPR001348 ATP phosphoribosyltransferase HisG CLH39_02325 IPR024893 ATP phosphoribosyltransferase HisG, short form CLH39_02330 IPR001986 Enolpyruvate transferase domain CLH39_02330 IPR036968 Enolpyruvate transferase domain superfamily CLH39_02330 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLH39_02330 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CLH39_02340 IPR000412 ABC-2 transporter CLH39_02340 IPR013525 ABC-2 type transporter CLH39_02345 IPR003593 AAA+ ATPase domain CLH39_02345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02345 IPR017871 ABC transporter, conserved site CLH39_02345 IPR003439 ABC transporter-like CLH39_02360 IPR003399 Mce/MlaD CLH39_02360 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CLH39_02365 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CLH39_02365 IPR030802 ABC transporter permease MalE CLH39_02370 IPR003593 AAA+ ATPase domain CLH39_02370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02370 IPR003439 ABC transporter-like CLH39_02370 IPR017871 ABC transporter, conserved site CLH39_02370 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CLH39_02385 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_02385 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLH39_02385 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLH39_02385 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_02385 IPR029045 ClpP/crotonase-like domain superfamily CLH39_02385 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_02385 IPR036291 NAD(P)-binding domain superfamily CLH39_02390 IPR016039 Thiolase-like CLH39_02390 IPR020616 Thiolase, N-terminal CLH39_02390 IPR020613 Thiolase, conserved site CLH39_02390 IPR002155 Thiolase CLH39_02390 IPR020617 Thiolase, C-terminal CLH39_02390 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_02390 IPR020610 Thiolase, active site CLH39_02400 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CLH39_02400 IPR010609 Gp5, C-terminal CLH39_02400 IPR006531 Gp5 N-terminal CLH39_02400 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CLH39_02400 IPR037026 Vgr protein, OB-fold domain superfamily CLH39_02435 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CLH39_02440 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CLH39_02450 IPR007048 IraD/Gp25-like CLH39_02450 IPR017737 Type VI secretion system-related protein CLH39_02455 IPR010272 Type VI secretion system, TssF-like CLH39_02480 IPR010263 Type VI secretion protein, VC_A0114 CLH39_02485 IPR036737 OmpA-like domain superfamily CLH39_02485 IPR006690 Outer membrane protein, OmpA-like, conserved site CLH39_02485 IPR006665 OmpA-like domain CLH39_02485 IPR006664 Outer membrane protein, bacterial CLH39_02485 IPR039567 Glycine zipper domain CLH39_02490 IPR017731 Type VI secretion system, IcmF CLH39_02490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02490 IPR009612 IcmF-related CLH39_02490 IPR010623 Type VI secretion system IcmF, C-terminal CLH39_02490 IPR025743 IcmF-related, N-terminal domain CLH39_02505 IPR000620 EamA domain CLH39_02510 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_02510 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_02510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_02510 IPR000524 Transcription regulator HTH, GntR CLH39_02510 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02510 IPR004839 Aminotransferase, class I/classII CLH39_02515 IPR000620 EamA domain CLH39_02520 IPR017588 Uric acid permease UacT-like CLH39_02520 IPR006042 Xanthine/uracil permease CLH39_02520 IPR006043 Xanthine/uracil/vitamin C permease CLH39_02525 IPR016039 Thiolase-like CLH39_02525 IPR006162 Phosphopantetheine attachment site CLH39_02525 IPR009081 Phosphopantetheine binding ACP domain CLH39_02525 IPR032821 Ketoacyl-synthetase, C-terminal extension CLH39_02525 IPR036736 ACP-like superfamily CLH39_02525 IPR018201 Beta-ketoacyl synthase, active site CLH39_02525 IPR014031 Beta-ketoacyl synthase, C-terminal CLH39_02525 IPR014030 Beta-ketoacyl synthase, N-terminal CLH39_02525 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLH39_02525 IPR036291 NAD(P)-binding domain superfamily CLH39_02525 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLH39_02525 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_02525 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLH39_02525 IPR014043 Acyl transferase CLH39_02525 IPR011032 GroES-like superfamily CLH39_02525 IPR042104 Polyketide synthase, dehydratase domain superfamily CLH39_02525 IPR020843 Polyketide synthase, enoylreductase domain CLH39_02525 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLH39_02525 IPR013968 Polyketide synthase, ketoreductase domain CLH39_02525 IPR020807 Polyketide synthase, dehydratase domain CLH39_02530 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CLH39_02530 IPR004839 Aminotransferase, class I/classII CLH39_02530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_02530 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CLH39_02530 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type CLH39_02530 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_02530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_02535 IPR003715 Polysaccharide export protein CLH39_02540 IPR000412 ABC-2 transporter CLH39_02540 IPR013525 ABC-2 type transporter CLH39_02545 IPR003593 AAA+ ATPase domain CLH39_02545 IPR017871 ABC transporter, conserved site CLH39_02545 IPR003439 ABC transporter-like CLH39_02545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02550 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD CLH39_02560 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CLH39_02560 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CLH39_02565 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC CLH39_02565 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CLH39_02565 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLH39_02565 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLH39_02565 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CLH39_02565 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLH39_02565 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLH39_02565 IPR036291 NAD(P)-binding domain superfamily CLH39_02565 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_02570 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLH39_02570 IPR001296 Glycosyl transferase, family 1 CLH39_02600 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_02605 IPR036291 NAD(P)-binding domain superfamily CLH39_02605 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_02605 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_02625 IPR018189 Phosphoglucose isomerase, conserved site CLH39_02625 IPR035482 Phosphoglucose isomerase, SIS domain 2 CLH39_02625 IPR023096 Phosphoglucose isomerase, C-terminal CLH39_02625 IPR001672 Phosphoglucose isomerase (PGI) CLH39_02625 IPR035476 Phosphoglucose isomerase, SIS domain 1 CLH39_02640 IPR032688 ABC-2 family transporter protein CLH39_02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02645 IPR017871 ABC transporter, conserved site CLH39_02645 IPR003593 AAA+ ATPase domain CLH39_02645 IPR003439 ABC transporter-like CLH39_02650 IPR011050 Pectin lyase fold/virulence factor CLH39_02650 IPR012334 Pectin lyase fold CLH39_02650 IPR006626 Parallel beta-helix repeat CLH39_02650 IPR022441 Parallel beta-helix repeat-2 CLH39_02650 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain CLH39_02650 IPR026464 Nitrous oxide reductase family maturation protein NosD CLH39_02650 IPR006633 Carbohydrate-binding/sugar hydrolysis domain CLH39_02655 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CLH39_02655 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLH39_02655 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_02655 IPR041142 Nitrous oxide reductase, propeller repeat 2 CLH39_02655 IPR041114 Nitrous oxide reductase, propeller repeat 1 CLH39_02655 IPR023644 Nitrous-oxide reductase CLH39_02655 IPR011045 Nitrous oxide reductase, N-terminal CLH39_02655 IPR028096 EfeO-type cupredoxin-like domain CLH39_02655 IPR008972 Cupredoxin CLH39_02660 IPR011399 Nitrous oxide reductase expression regulator NosR CLH39_02660 IPR007329 FMN-binding CLH39_02660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_02665 IPR001763 Rhodanese-like domain CLH39_02665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02665 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase CLH39_02665 IPR036873 Rhodanese-like domain superfamily CLH39_02670 IPR004536 Selenophosphate synthetase CLH39_02670 IPR023061 Selenophosphate synthetase, class I CLH39_02670 IPR036921 PurM-like, N-terminal domain superfamily CLH39_02670 IPR016188 PurM-like, N-terminal domain CLH39_02670 IPR010918 PurM-like, C-terminal domain CLH39_02670 IPR036676 PurM-like, C-terminal domain superfamily CLH39_02680 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_02680 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_02680 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_02680 IPR010917 TonB-dependent receptor, conserved site CLH39_02680 IPR039426 Vitamin B12 transporter BtuB-like CLH39_02680 IPR012910 TonB-dependent receptor, plug domain CLH39_02680 IPR010105 TonB-dependent siderophore receptor CLH39_02685 IPR001303 Class II aldolase/adducin N-terminal CLH39_02685 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLH39_02695 IPR031157 Tr-type G domain, conserved site CLH39_02695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02695 IPR000795 Transcription factor, GTP-binding domain CLH39_02695 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_02695 IPR015190 Translation elongation factor SelB, winged helix, type 2 CLH39_02695 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02695 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02695 IPR015191 Translation elongation factor SelB, winged helix, type 3 CLH39_02695 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_02695 IPR004535 Translation elongation factor, selenocysteine-specific CLH39_02695 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLH39_02700 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CLH39_02700 IPR004534 L-seryl-tRNA(Sec) selenium transferase CLH39_02700 IPR018319 L-seryl-tRNA selenium transferase-like CLH39_02700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_02700 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_02705 IPR006452 Formate dehydrogenase accessory protein CLH39_02705 IPR024064 FdhE-like superfamily CLH39_02710 IPR006471 Formate dehydrogenase, gamma subunit CLH39_02710 IPR016174 Di-haem cytochrome, transmembrane CLH39_02710 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CLH39_02715 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_02715 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_02715 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria CLH39_02715 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CLH39_02715 IPR014603 Formate dehydrogenase iron-sulphur subunit CLH39_02715 IPR015246 Formate dehydrogenase, transmembrane CLH39_02720 IPR006443 Formate dehydrogenase-N, alpha subunit CLH39_02720 IPR006657 Molybdopterin dinucleotide-binding domain CLH39_02720 IPR009010 Aspartate decarboxylase-like domain superfamily CLH39_02720 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CLH39_02720 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CLH39_02720 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CLH39_02720 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_02720 IPR006656 Molybdopterin oxidoreductase CLH39_02725 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CLH39_02725 IPR006656 Molybdopterin oxidoreductase CLH39_02725 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CLH39_02725 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CLH39_02725 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_02725 IPR006657 Molybdopterin dinucleotide-binding domain CLH39_02725 IPR006443 Formate dehydrogenase-N, alpha subunit CLH39_02725 IPR009010 Aspartate decarboxylase-like domain superfamily CLH39_02750 IPR003593 AAA+ ATPase domain CLH39_02750 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CLH39_02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_02750 IPR017871 ABC transporter, conserved site CLH39_02750 IPR003439 ABC transporter-like CLH39_02770 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_02770 IPR003010 Carbon-nitrogen hydrolase CLH39_02770 IPR000132 Nitrilase/cyanide hydratase, conserved site CLH39_02775 IPR036259 MFS transporter superfamily CLH39_02775 IPR005829 Sugar transporter, conserved site CLH39_02775 IPR005828 Major facilitator, sugar transporter-like CLH39_02775 IPR004736 MFS transporter, metabolite:H symporter CLH39_02775 IPR020846 Major facilitator superfamily domain CLH39_02775 IPR036292 Proline/betaine transporter ProP, C-terminal CLH39_02775 IPR015041 Osmosensory transporter coiled coil CLH39_02780 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02780 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02780 IPR000847 Transcription regulator HTH, LysR CLH39_02780 IPR005119 LysR, substrate-binding CLH39_02785 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02785 IPR039420 Transcriptional regulatory protein WalR-like CLH39_02785 IPR001789 Signal transduction response regulator, receiver domain CLH39_02785 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_02785 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_02785 IPR011006 CheY-like superfamily CLH39_02790 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_02790 IPR006290 Heavy metal sensor kinase CLH39_02790 IPR003660 HAMP domain CLH39_02790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_02790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_02790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_02790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_02790 IPR005467 Histidine kinase domain CLH39_02805 IPR002823 Protein of unknown function DUF112, transmembrane CLH39_02810 IPR017516 AbrB duplication CLH39_02810 IPR007820 AbrB family CLH39_02820 IPR018152 Superoxide dismutase, copper/zinc, binding site CLH39_02820 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CLH39_02820 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CLH39_02820 IPR001424 Superoxide dismutase, copper/zinc binding domain CLH39_02825 IPR036390 Winged helix DNA-binding domain superfamily CLH39_02825 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02825 IPR000847 Transcription regulator HTH, LysR CLH39_02825 IPR005119 LysR, substrate-binding CLH39_02825 IPR020890 Transcription regulator HTH, HdfR CLH39_02830 IPR003010 Carbon-nitrogen hydrolase CLH39_02830 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_02830 IPR000132 Nitrilase/cyanide hydratase, conserved site CLH39_02835 IPR038377 Sodium/glucose symporter superfamily CLH39_02835 IPR001734 Sodium/solute symporter CLH39_02835 IPR018212 Sodium/solute symporter, conserved site CLH39_02845 IPR039425 RNA polymerase sigma-70 like CLH39_02845 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_02845 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLH39_02845 IPR007627 RNA polymerase sigma-70 region 2 CLH39_02845 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_02845 IPR014284 RNA polymerase sigma-70 like domain CLH39_02845 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_02845 IPR013325 RNA polymerase sigma factor, region 2 CLH39_02855 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_02855 IPR010105 TonB-dependent siderophore receptor CLH39_02855 IPR010917 TonB-dependent receptor, conserved site CLH39_02855 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_02855 IPR012910 TonB-dependent receptor, plug domain CLH39_02855 IPR011662 Secretin/TonB, short N-terminal domain CLH39_02855 IPR039423 TonB-dependent receptor-like CLH39_02855 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_02860 IPR004498 Ribosomal protein L11 methyltransferase CLH39_02860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_02865 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CLH39_02865 IPR011530 Ribosomal RNA adenine dimethylase CLH39_02865 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLH39_02865 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CLH39_02865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_02865 IPR023165 rRNA adenine dimethylase-like CLH39_02875 IPR014163 Tol-Pal system, TolQ CLH39_02875 IPR002898 MotA/TolQ/ExbB proton channel CLH39_02880 IPR003400 Biopolymer transport protein ExbD/TolR CLH39_02905 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLH39_02905 IPR023059 Foldase protein PrsA CLH39_02905 IPR027304 Trigger factor/SurA domain superfamily CLH39_02950 IPR017508 HipA, N-terminal subdomain 1 CLH39_02950 IPR012893 HipA-like, C-terminal CLH39_02960 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CLH39_02960 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CLH39_02960 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CLH39_02960 IPR036291 NAD(P)-binding domain superfamily CLH39_02960 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CLH39_02960 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CLH39_02960 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLH39_02960 IPR018214 Glutamyl-tRNA reductase, conserved site CLH39_02965 IPR005139 Peptide chain release factor CLH39_02965 IPR000352 Peptide chain release factor class I CLH39_02965 IPR004373 Peptide chain release factor 1 CLH39_02970 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CLH39_02970 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CLH39_02970 IPR004556 Methyltransferase HemK-like CLH39_02970 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLH39_02970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_02970 IPR007848 Methyltransferase small domain CLH39_02975 IPR036249 Thioredoxin-like superfamily CLH39_02975 IPR014434 Monothiol glutaredoxin CLH39_02975 IPR033658 Glutaredoxin, PICOT-like CLH39_02975 IPR002109 Glutaredoxin CLH39_02975 IPR004480 Monothiol glutaredoxin-related CLH39_02980 IPR003382 Flavoprotein CLH39_02980 IPR036551 Flavin prenyltransferase-like CLH39_02980 IPR004507 Flavin prenyltransferase UbiX-like CLH39_02985 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLH39_02985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_02985 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CLH39_03000 IPR014748 Enoyl-CoA hydratase, C-terminal CLH39_03000 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_03000 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_03000 IPR029045 ClpP/crotonase-like domain superfamily CLH39_03010 IPR000568 ATP synthase, F0 complex, subunit A CLH39_03010 IPR023011 ATP synthase, F0 complex, subunit A, active site CLH39_03010 IPR035908 ATP synthase, F0 complex, subunit A superfamily CLH39_03015 IPR035921 F/V-ATP synthase subunit C superfamily CLH39_03015 IPR002379 V-ATPase proteolipid subunit C-like domain CLH39_03015 IPR038662 F1F0 ATP synthase subunit C superfamily CLH39_03015 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CLH39_03015 IPR000454 ATP synthase, F0 complex, subunit C CLH39_03015 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CLH39_03020 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CLH39_03020 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CLH39_03020 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CLH39_03025 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CLH39_03025 IPR000711 ATPase, OSCP/delta subunit CLH39_03030 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CLH39_03030 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CLH39_03030 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CLH39_03030 IPR005294 ATP synthase, F1 complex, alpha subunit CLH39_03030 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLH39_03030 IPR000793 ATP synthase, alpha subunit, C-terminal CLH39_03030 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CLH39_03030 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CLH39_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03030 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLH39_03035 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CLH39_03035 IPR000131 ATP synthase, F1 complex, gamma subunit CLH39_03035 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CLH39_03040 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CLH39_03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03040 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLH39_03040 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CLH39_03040 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CLH39_03040 IPR005722 ATP synthase, F1 complex, beta subunit CLH39_03040 IPR003593 AAA+ ATPase domain CLH39_03040 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLH39_03045 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CLH39_03045 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CLH39_03045 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CLH39_03045 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CLH39_03055 IPR035906 MetI-like superfamily CLH39_03055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_03060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03060 IPR015859 ABC transporter, taurine import, TauD CLH39_03060 IPR017871 ABC transporter, conserved site CLH39_03060 IPR003439 ABC transporter-like CLH39_03060 IPR003593 AAA+ ATPase domain CLH39_03065 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales CLH39_03065 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase CLH39_03065 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_03065 IPR040442 Pyruvate kinase-like domain superfamily CLH39_03065 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CLH39_03070 IPR000847 Transcription regulator HTH, LysR CLH39_03070 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03070 IPR036390 Winged helix DNA-binding domain superfamily CLH39_03070 IPR005119 LysR, substrate-binding CLH39_03075 IPR026286 Maleate isomerase/Arylmalonate decarboxylase CLH39_03075 IPR028615 Maleate isomerase CLH39_03080 IPR005886 UDP-glucose 4-epimerase CLH39_03080 IPR036291 NAD(P)-binding domain superfamily CLH39_03080 IPR016040 NAD(P)-binding domain CLH39_03085 IPR001451 Hexapeptide repeat CLH39_03085 IPR011004 Trimeric LpxA-like superfamily CLH39_03095 IPR006638 Elp3/MiaB/NifB CLH39_03095 IPR005839 Methylthiotransferase CLH39_03095 IPR020612 Methylthiotransferase, conserved site CLH39_03095 IPR002792 TRAM domain CLH39_03095 IPR038135 Methylthiotransferase, N-terminal domain superfamily CLH39_03095 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CLH39_03095 IPR041582 RimO, TRAM domain CLH39_03095 IPR007197 Radical SAM CLH39_03095 IPR023404 Radical SAM, alpha/beta horseshoe CLH39_03095 IPR013848 Methylthiotransferase, N-terminal CLH39_03100 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CLH39_03100 IPR035926 NusB-like superfamily CLH39_03100 IPR006027 NusB/RsmB/TIM44 CLH39_03100 IPR023267 RNA (C5-cytosine) methyltransferase CLH39_03100 IPR004573 rRNA small subunit methyltransferase B CLH39_03100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_03100 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae CLH39_03100 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CLH39_03110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_03110 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CLH39_03110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_03110 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_03110 IPR003660 HAMP domain CLH39_03110 IPR005467 Histidine kinase domain CLH39_03115 IPR011006 CheY-like superfamily CLH39_03115 IPR025944 Sigma-54 interaction domain, conserved site CLH39_03115 IPR003593 AAA+ ATPase domain CLH39_03115 IPR009057 Homeobox-like domain superfamily CLH39_03115 IPR002197 DNA binding HTH domain, Fis-type CLH39_03115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03115 IPR001789 Signal transduction response regulator, receiver domain CLH39_03115 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_03115 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_03115 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_03120 IPR034964 Lumazine synthase CLH39_03120 IPR002180 Lumazine/riboflavin synthase CLH39_03120 IPR036467 Lumazine/riboflavin synthase superfamily CLH39_03125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_03125 IPR003660 HAMP domain CLH39_03125 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_03125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_03125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_03125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_03125 IPR005467 Histidine kinase domain CLH39_03130 IPR011006 CheY-like superfamily CLH39_03130 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_03130 IPR001789 Signal transduction response regulator, receiver domain CLH39_03130 IPR039420 Transcriptional regulatory protein WalR-like CLH39_03130 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03135 IPR010916 TonB box, conserved site CLH39_03135 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_03135 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_03135 IPR012910 TonB-dependent receptor, plug domain CLH39_03135 IPR039426 Vitamin B12 transporter BtuB-like CLH39_03135 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_03135 IPR010917 TonB-dependent receptor, conserved site CLH39_03140 IPR013216 Methyltransferase type 11 CLH39_03140 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CLH39_03140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_03145 IPR029057 Phosphoribosyltransferase-like CLH39_03145 IPR000836 Phosphoribosyltransferase domain CLH39_03145 IPR005222 Competence protein ComF CLH39_03150 IPR029028 Alpha/beta knot methyltransferases CLH39_03150 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLH39_03150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLH39_03150 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CLH39_03155 IPR042100 Bordetella uptake gene, domain 1 CLH39_03155 IPR005064 Bordetella uptake gene CLH39_03160 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_03160 IPR036291 NAD(P)-binding domain superfamily CLH39_03160 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CLH39_03160 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CLH39_03160 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_03160 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CLH39_03165 IPR035958 SecB-like superfamily CLH39_03165 IPR003708 Bacterial protein export chaperone SecB CLH39_03170 IPR011767 Glutaredoxin active site CLH39_03170 IPR002109 Glutaredoxin CLH39_03170 IPR014025 Glutaredoxin subgroup CLH39_03170 IPR011900 Glutaredoxin, GrxC CLH39_03170 IPR036249 Thioredoxin-like superfamily CLH39_03175 IPR001763 Rhodanese-like domain CLH39_03175 IPR036873 Rhodanese-like domain superfamily CLH39_03180 IPR013078 Histidine phosphatase superfamily, clade-1 CLH39_03180 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CLH39_03180 IPR005952 Phosphoglycerate mutase 1 CLH39_03180 IPR029033 Histidine phosphatase superfamily CLH39_03185 IPR016047 Peptidase M23 CLH39_03185 IPR011055 Duplicated hybrid motif CLH39_03190 IPR036034 PDZ superfamily CLH39_03190 IPR001478 PDZ domain CLH39_03190 IPR004447 C-terminal-processing peptidase S41A CLH39_03190 IPR029045 ClpP/crotonase-like domain superfamily CLH39_03190 IPR005151 Tail specific protease CLH39_03195 IPR035985 Ubiquitin-activating enzyme CLH39_03195 IPR000594 THIF-type NAD/FAD binding fold CLH39_03195 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF CLH39_03200 IPR018060 DNA binding HTH domain, AraC-type CLH39_03200 IPR020449 Transcription regulator HTH, AraC- type CLH39_03200 IPR009057 Homeobox-like domain superfamily CLH39_03205 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_03205 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_03205 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_03205 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_03205 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_03205 IPR015590 Aldehyde dehydrogenase domain CLH39_03215 IPR001057 Glutamate/acetylglutamate kinase CLH39_03215 IPR001048 Aspartate/glutamate/uridylate kinase CLH39_03215 IPR041727 N-Acetyl-L-glutamate kinase, cyclic CLH39_03215 IPR037528 Acetylglutamate kinase ArgB CLH39_03215 IPR004662 Acetylglutamate kinase family CLH39_03215 IPR036393 Acetylglutamate kinase-like superfamily CLH39_03220 IPR036249 Thioredoxin-like superfamily CLH39_03220 IPR013766 Thioredoxin domain CLH39_03220 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLH39_03220 IPR023555 Thiol-disulphide oxidoreductase ResA CLH39_03230 IPR004515 Phosphoheptose isomerase CLH39_03230 IPR001347 Sugar isomerase (SIS) CLH39_03230 IPR035461 GmhA/DiaA CLH39_03235 IPR003509 Uncharacterised protein family UPF0102 CLH39_03235 IPR011856 tRNA endonuclease-like domain superfamily CLH39_03235 IPR011335 Restriction endonuclease type II-like CLH39_03240 IPR035996 Tetrapyrrole methylase superfamily CLH39_03240 IPR014777 Tetrapyrrole methylase, subdomain 1 CLH39_03240 IPR014776 Tetrapyrrole methylase, subdomain 2 CLH39_03240 IPR008189 rRNA small subunit methyltransferase I CLH39_03240 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CLH39_03240 IPR000878 Tetrapyrrole methylase CLH39_03245 IPR036680 Sporulation-like domain superfamily CLH39_03245 IPR007730 Sporulation-like domain CLH39_03245 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CLH39_03245 IPR009009 RlpA-like protein, double-psi beta-barrel domain CLH39_03245 IPR036908 RlpA-like domain superfamily CLH39_03245 IPR012997 Rare lipoprotein A CLH39_03250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03250 IPR005337 RapZ-like family CLH39_03255 IPR003755 HPr(Ser) kinase/phosphorylase CLH39_03255 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CLH39_03255 IPR011104 HPr kinase/phosphorylase, C-terminal CLH39_03255 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CLH39_03260 IPR016152 Phosphotransferase/anion transporter CLH39_03260 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CLH39_03260 IPR002178 PTS EIIA type-2 domain CLH39_03265 IPR036567 Ribosome hibernation promotion factor-like CLH39_03265 IPR003489 Ribosome hibernation promoting factor/RaiA CLH39_03270 IPR003593 AAA+ ATPase domain CLH39_03270 IPR003439 ABC transporter-like CLH39_03270 IPR017871 ABC transporter, conserved site CLH39_03270 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CLH39_03270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03285 IPR010023 KdsC family CLH39_03285 IPR023214 HAD superfamily CLH39_03285 IPR036412 HAD-like superfamily CLH39_03290 IPR001347 Sugar isomerase (SIS) CLH39_03290 IPR000644 CBS domain CLH39_03290 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CLH39_03290 IPR035474 KpsF-like, SIS domain CLH39_03300 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CLH39_03305 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CLH39_03310 IPR012994 Membrane bound YbgT-like CLH39_03310 IPR011724 Cyd operon protein YbgT CLH39_03315 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_03315 IPR003439 ABC transporter-like CLH39_03315 IPR011527 ABC transporter type 1, transmembrane domain CLH39_03315 IPR039421 Type I protein exporter CLH39_03315 IPR017871 ABC transporter, conserved site CLH39_03315 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CLH39_03315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03315 IPR003593 AAA+ ATPase domain CLH39_03320 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CLH39_03320 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_03320 IPR003593 AAA+ ATPase domain CLH39_03320 IPR017871 ABC transporter, conserved site CLH39_03320 IPR011527 ABC transporter type 1, transmembrane domain CLH39_03320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03320 IPR003439 ABC transporter-like CLH39_03325 IPR029057 Phosphoribosyltransferase-like CLH39_03325 IPR005764 Adenine phosphoribosyl transferase CLH39_03325 IPR000836 Phosphoribosyltransferase domain CLH39_03335 IPR036709 Autotransporter beta-domain superfamily CLH39_03335 IPR036852 Peptidase S8/S53 domain superfamily CLH39_03335 IPR023828 Peptidase S8, subtilisin, Ser-active site CLH39_03335 IPR005546 Autotransporter beta-domain CLH39_03335 IPR000209 Peptidase S8/S53 domain CLH39_03335 IPR015500 Peptidase S8, subtilisin-related CLH39_03335 IPR034061 Autotransporter serine protease peptidase domain CLH39_03345 IPR034061 Autotransporter serine protease peptidase domain CLH39_03345 IPR005546 Autotransporter beta-domain CLH39_03345 IPR015500 Peptidase S8, subtilisin-related CLH39_03345 IPR023828 Peptidase S8, subtilisin, Ser-active site CLH39_03345 IPR000209 Peptidase S8/S53 domain CLH39_03345 IPR036709 Autotransporter beta-domain superfamily CLH39_03345 IPR036852 Peptidase S8/S53 domain superfamily CLH39_03360 IPR032816 SNARE associated Golgi protein CLH39_03365 IPR001721 Threonine dehydratase, ACT-like domain CLH39_03365 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLH39_03365 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_03365 IPR038110 Threonine dehydratase, ACT-like domain superfamily CLH39_03365 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_03365 IPR005787 Threonine dehydratase, biosynthetic CLH39_03370 IPR003778 Carboxyltransferase domain, subdomain A and B CLH39_03370 IPR029000 Cyclophilin-like domain superfamily CLH39_03375 IPR003833 Carboxyltransferase domain, subdomain C and D CLH39_03375 IPR010016 KipI family CLH39_03375 IPR029000 Cyclophilin-like domain superfamily CLH39_03385 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_03385 IPR005467 Histidine kinase domain CLH39_03385 IPR035965 PAS domain superfamily CLH39_03385 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_03385 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_03385 IPR000014 PAS domain CLH39_03385 IPR021766 Phosphate regulon sensor protein PhoR CLH39_03385 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_03385 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CLH39_03385 IPR013767 PAS fold CLH39_03385 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_03390 IPR011006 CheY-like superfamily CLH39_03390 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03390 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_03390 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CLH39_03390 IPR001789 Signal transduction response regulator, receiver domain CLH39_03390 IPR039420 Transcriptional regulatory protein WalR-like CLH39_03395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_03395 IPR004033 UbiE/COQ5 methyltransferase CLH39_03395 IPR023576 UbiE/COQ5 methyltransferase, conserved site CLH39_03410 IPR000719 Protein kinase domain CLH39_03410 IPR011009 Protein kinase-like domain superfamily CLH39_03410 IPR004147 UbiB domain CLH39_03410 IPR010232 Probable protein kinase UbiB CLH39_03420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_03420 IPR011914 RfaE bifunctional protein, domain II CLH39_03420 IPR004821 Cytidyltransferase-like domain CLH39_03425 IPR003423 Outer membrane efflux protein CLH39_03425 IPR010130 Type I secretion outer membrane protein, TolC CLH39_03430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_03430 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CLH39_03435 IPR000845 Nucleoside phosphorylase domain CLH39_03435 IPR010049 MTA/SAH nucleosidase CLH39_03435 IPR035994 Nucleoside phosphorylase superfamily CLH39_03440 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CLH39_03440 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLH39_03440 IPR029056 Ribokinase-like CLH39_03445 IPR013785 Aldolase-type TIM barrel CLH39_03445 IPR008867 Thiazole synthase CLH39_03445 IPR033983 Thiazole synthase ThiG CLH39_03460 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CLH39_03460 IPR004488 Magnesium/cobalt transport protein CorA CLH39_03470 IPR004488 Magnesium/cobalt transport protein CorA CLH39_03470 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CLH39_03480 IPR002299 Porin, Neisseria sp. type CLH39_03480 IPR023614 Porin domain superfamily CLH39_03480 IPR001702 Porin, Gram-negative type CLH39_03480 IPR033900 Porin domain, Gram-negative type CLH39_03495 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_03495 IPR013325 RNA polymerase sigma factor, region 2 CLH39_03495 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_03495 IPR007627 RNA polymerase sigma-70 region 2 CLH39_03495 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLH39_03495 IPR014284 RNA polymerase sigma-70 like domain CLH39_03495 IPR039425 RNA polymerase sigma-70 like CLH39_03495 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03505 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_03505 IPR011662 Secretin/TonB, short N-terminal domain CLH39_03505 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_03505 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_03505 IPR039423 TonB-dependent receptor-like CLH39_03505 IPR010917 TonB-dependent receptor, conserved site CLH39_03505 IPR010105 TonB-dependent siderophore receptor CLH39_03505 IPR012910 TonB-dependent receptor, plug domain CLH39_03510 IPR002491 ABC transporter periplasmic binding domain CLH39_03510 IPR023544 ABC transporter, vitamin B12-binding protein CLH39_03515 IPR012910 TonB-dependent receptor, plug domain CLH39_03515 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLH39_03515 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_03515 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_03515 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_03515 IPR039426 Vitamin B12 transporter BtuB-like CLH39_03520 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLH39_03520 IPR011822 Cobalamin-dependent methionine synthase CLH39_03520 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CLH39_03520 IPR000489 Pterin-binding domain CLH39_03520 IPR036594 Methionine synthase domain CLH39_03520 IPR033706 Methionine synthase, B12-binding domain CLH39_03520 IPR036589 Homocysteine-binding domain superfamily CLH39_03520 IPR003726 Homocysteine-binding domain CLH39_03520 IPR036724 Cobalamin-binding domain superfamily CLH39_03520 IPR006158 Cobalamin (vitamin B12)-binding domain CLH39_03520 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CLH39_03520 IPR011005 Dihydropteroate synthase-like CLH39_03530 IPR004638 Drug resistance transporter EmrB-like CLH39_03530 IPR011701 Major facilitator superfamily CLH39_03530 IPR036259 MFS transporter superfamily CLH39_03530 IPR020846 Major facilitator superfamily domain CLH39_03540 IPR003768 Segregation and condensation protein A CLH39_03545 IPR004821 Cytidyltransferase-like domain CLH39_03545 IPR003721 Pantoate-beta-alanine ligase CLH39_03545 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CLH39_03545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_03550 IPR011006 CheY-like superfamily CLH39_03550 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_03550 IPR001789 Signal transduction response regulator, receiver domain CLH39_03550 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03550 IPR000792 Transcription regulator LuxR, C-terminal CLH39_03560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03560 IPR001977 Dephospho-CoA kinase CLH39_03565 IPR027462 Z ring-associated protein D, C-terminal CLH39_03565 IPR009777 Cell division protein ZapD CLH39_03565 IPR036268 ZapD domain superfamily CLH39_03570 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLH39_03570 IPR022824 Multidrug resistance protein MdtA CLH39_03570 IPR006143 RND efflux pump, membrane fusion protein CLH39_03575 IPR022831 Multidrug resistance protein MdtB CLH39_03575 IPR001036 Acriflavin resistance protein CLH39_03575 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLH39_03580 IPR001036 Acriflavin resistance protein CLH39_03580 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLH39_03580 IPR023931 Multidrug resistance protein MdtC CLH39_03585 IPR003423 Outer membrane efflux protein CLH39_03585 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLH39_03590 IPR030374 Polyamine biosynthesis domain CLH39_03590 IPR037163 Spermidine synthase, tetramerisation domain superfamily CLH39_03590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_03590 IPR001045 Spermidine/spermine synthases CLH39_03590 IPR035246 Spermidine synthase, tetramerisation domain CLH39_03590 IPR030373 Polyamine biosynthesis domain, conserved site CLH39_03595 IPR020084 NUDIX hydrolase, conserved site CLH39_03595 IPR015797 NUDIX hydrolase-like domain superfamily CLH39_03595 IPR020476 NUDIX hydrolase CLH39_03595 IPR000086 NUDIX hydrolase domain CLH39_03605 IPR000092 Polyprenyl synthetase CLH39_03605 IPR033749 Polyprenyl synthetase, conserved site CLH39_03605 IPR008949 Isoprenoid synthase domain superfamily CLH39_03610 IPR004445 Sodium/glutamate symport carrier protein GltS CLH39_03625 IPR009057 Homeobox-like domain superfamily CLH39_03625 IPR025944 Sigma-54 interaction domain, conserved site CLH39_03625 IPR002197 DNA binding HTH domain, Fis-type CLH39_03625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03625 IPR029016 GAF-like domain superfamily CLH39_03625 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_03625 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_03625 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_03625 IPR003018 GAF domain CLH39_03625 IPR003593 AAA+ ATPase domain CLH39_03630 IPR023616 Cytochrome c oxidase-like, subunit I domain CLH39_03630 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLH39_03630 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLH39_03630 IPR000883 Cytochrome c oxidase subunit I CLH39_03635 IPR001117 Multicopper oxidase, type 1 CLH39_03635 IPR011707 Multicopper oxidase, type 3 CLH39_03635 IPR001287 Nitrite reductase, copper-type CLH39_03635 IPR008972 Cupredoxin CLH39_03650 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type CLH39_03650 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CLH39_03655 IPR032808 DoxX family CLH39_03660 IPR005119 LysR, substrate-binding CLH39_03660 IPR000847 Transcription regulator HTH, LysR CLH39_03660 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03660 IPR036390 Winged helix DNA-binding domain superfamily CLH39_03665 IPR004467 Orotate phosphoribosyl transferase domain CLH39_03665 IPR000836 Phosphoribosyltransferase domain CLH39_03665 IPR029057 Phosphoribosyltransferase-like CLH39_03665 IPR023031 Orotate phosphoribosyltransferase CLH39_03670 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CLH39_03670 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CLH39_03670 IPR018027 Asn/Gln amidotransferase CLH39_03670 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CLH39_03670 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CLH39_03670 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CLH39_03670 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CLH39_03670 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CLH39_03670 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLH39_03675 IPR020556 Amidase, conserved site CLH39_03675 IPR023631 Amidase signature domain CLH39_03675 IPR036928 Amidase signature (AS) superfamily CLH39_03675 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLH39_03675 IPR000120 Amidase CLH39_03680 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CLH39_03680 IPR003837 Glu-tRNAGln amidotransferase C subunit CLH39_03685 IPR004753 Cell shape determining protein MreB CLH39_03690 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CLH39_03690 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CLH39_03690 IPR007221 Rod shape-determining protein MreC CLH39_03700 IPR005311 Penicillin-binding protein, dimerisation domain CLH39_03700 IPR012338 Beta-lactamase/transpeptidase-like CLH39_03700 IPR017790 Penicillin-binding protein 2 CLH39_03700 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CLH39_03700 IPR001460 Penicillin-binding protein, transpeptidase CLH39_03705 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CLH39_03705 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CLH39_03705 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CLH39_03710 IPR011257 DNA glycosylase CLH39_03710 IPR005760 A/G-specific adenine glycosylase MutY CLH39_03710 IPR000445 Helix-hairpin-helix motif CLH39_03710 IPR004036 Endonuclease III-like, conserved site-2 CLH39_03710 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CLH39_03710 IPR003265 HhH-GPD domain CLH39_03710 IPR029119 MutY, C-terminal CLH39_03710 IPR015797 NUDIX hydrolase-like domain superfamily CLH39_03710 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLH39_03710 IPR004035 Endonuclease III, iron-sulphur binding site CLH39_03715 IPR040690 FtsX, extracellular domain CLH39_03715 IPR004513 Cell division protein FtsX CLH39_03720 IPR005286 Cell division protein FtsE, ATP-binding CLH39_03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03720 IPR003593 AAA+ ATPase domain CLH39_03720 IPR003439 ABC transporter-like CLH39_03720 IPR017871 ABC transporter, conserved site CLH39_03730 IPR018313 Solute-binding protein family 3, conserved site CLH39_03730 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_03735 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_03735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_03735 IPR035906 MetI-like superfamily CLH39_03740 IPR035906 MetI-like superfamily CLH39_03740 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_03740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_03745 IPR003593 AAA+ ATPase domain CLH39_03745 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_03745 IPR003439 ABC transporter-like CLH39_03745 IPR017871 ABC transporter, conserved site CLH39_03745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03750 IPR042100 Bordetella uptake gene, domain 1 CLH39_03750 IPR005064 Bordetella uptake gene CLH39_03755 IPR008722 Outer membrane porin F, N-terminal CLH39_03755 IPR036737 OmpA-like domain superfamily CLH39_03755 IPR006690 Outer membrane protein, OmpA-like, conserved site CLH39_03755 IPR006665 OmpA-like domain CLH39_03755 IPR006664 Outer membrane protein, bacterial CLH39_03755 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CLH39_03755 IPR028974 TSP type-3 repeat CLH39_03765 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CLH39_03765 IPR037509 Phosphomethylpyrimidine synthase CLH39_03765 IPR025747 ThiC-associated domain CLH39_03765 IPR038521 ThiC/Bza superfamily CLH39_03785 IPR023080 D-amino acid dehydrogenase DadA CLH39_03785 IPR006076 FAD dependent oxidoreductase CLH39_03785 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_03790 IPR019797 Glutamate 5-kinase, conserved site CLH39_03790 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CLH39_03790 IPR011529 Glutamate 5-kinase CLH39_03790 IPR001057 Glutamate/acetylglutamate kinase CLH39_03790 IPR041739 Glutamate-5-kinase domain CLH39_03790 IPR001048 Aspartate/glutamate/uridylate kinase CLH39_03790 IPR036393 Acetylglutamate kinase-like superfamily CLH39_03790 IPR036974 PUA domain superfamily CLH39_03790 IPR002478 PUA domain CLH39_03790 IPR015947 PUA-like superfamily CLH39_03795 IPR035101 GTP-binding protein, Obg-type CLH39_03795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_03795 IPR006169 GTP1/OBG domain CLH39_03795 IPR006074 GTP1/OBG, conserved site CLH39_03795 IPR014100 GTP-binding protein Obg/CgtA CLH39_03795 IPR031167 OBG-type guanine nucleotide-binding (G) domain CLH39_03795 IPR006073 GTP binding domain CLH39_03795 IPR036726 GTP1/OBG domain superfamily CLH39_03800 IPR018261 Ribosomal protein L27, conserved site CLH39_03800 IPR001684 Ribosomal protein L27 CLH39_03805 IPR028909 Ribosomal protein L21-like CLH39_03805 IPR001787 Ribosomal protein L21 CLH39_03805 IPR018258 Ribosomal protein L21, conserved site CLH39_03805 IPR036164 L21-like superfamily CLH39_03810 IPR036629 YjbJ superfamily CLH39_03810 IPR026042 Stress response protein YjbJ CLH39_03810 IPR008462 CsbD-like domain CLH39_03820 IPR002813 Arginine biosynthesis protein ArgJ CLH39_03820 IPR016117 ArgJ-like domain superfamily CLH39_03820 IPR042195 ArgJ beta chain, C-terminal domain CLH39_03830 IPR000873 AMP-dependent synthetase/ligase CLH39_03830 IPR011957 Benzoate-CoA ligase family CLH39_03830 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_03835 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_03835 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_03835 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CLH39_03835 IPR005814 Aminotransferase class-III CLH39_03835 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_03840 IPR022998 Thiamine phosphate synthase/TenI CLH39_03840 IPR034291 Thiamine phosphate synthase CLH39_03840 IPR036206 Thiamin phosphate synthase superfamily CLH39_03840 IPR013785 Aldolase-type TIM barrel CLH39_03850 IPR024935 Rubredoxin domain CLH39_03850 IPR024934 Rubredoxin-like domain CLH39_03850 IPR018527 Rubredoxin, iron-binding site CLH39_03850 IPR024922 Rubredoxin CLH39_03855 IPR003774 Protein of unknown function UPF0301 CLH39_03860 IPR037027 YqgF/RNase H-like domain superfamily CLH39_03860 IPR006641 YqgF/RNase H-like domain CLH39_03860 IPR005227 Putative pre-16S rRNA nuclease CLH39_03860 IPR012337 Ribonuclease H-like superfamily CLH39_03865 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CLH39_03865 IPR002123 Phospholipid/glycerol acyltransferase CLH39_03870 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLH39_03870 IPR029052 Metallo-dependent phosphatase-like CLH39_03870 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CLH39_03880 IPR001264 Glycosyl transferase, family 51 CLH39_03880 IPR023346 Lysozyme-like domain superfamily CLH39_03880 IPR036950 Penicillin binding protein transglycosylase domain CLH39_03880 IPR011812 Biosynthetic peptidoglycan transglycosylase CLH39_03885 IPR036291 NAD(P)-binding domain superfamily CLH39_03885 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLH39_03885 IPR022893 Shikimate dehydrogenase family CLH39_03885 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CLH39_03885 IPR011342 Shikimate dehydrogenase CLH39_03885 IPR041121 SDH, C-terminal CLH39_03900 IPR029058 Alpha/Beta hydrolase fold CLH39_03900 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CLH39_03905 IPR005757 Murein peptide ligase CLH39_03905 IPR036565 Mur-like, catalytic domain superfamily CLH39_03905 IPR013221 Mur ligase, central CLH39_03905 IPR004101 Mur ligase, C-terminal CLH39_03905 IPR036615 Mur ligase, C-terminal domain superfamily CLH39_03905 IPR000713 Mur ligase, N-terminal catalytic domain CLH39_03910 IPR013766 Thioredoxin domain CLH39_03910 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLH39_03910 IPR023555 Thiol-disulphide oxidoreductase ResA CLH39_03910 IPR036249 Thioredoxin-like superfamily CLH39_03915 IPR018509 Dehydroquinase, class II, conserved site CLH39_03915 IPR001874 Dehydroquinase, class II CLH39_03915 IPR036441 Dehydroquinase, class II superfamily CLH39_03920 IPR001882 Biotin-binding site CLH39_03920 IPR000089 Biotin/lipoyl attachment CLH39_03920 IPR011053 Single hybrid motif CLH39_03920 IPR001249 Acetyl-CoA biotin carboxyl carrier CLH39_03925 IPR005481 Biotin carboxylase-like, N-terminal domain CLH39_03925 IPR011764 Biotin carboxylation domain CLH39_03925 IPR005482 Biotin carboxylase, C-terminal CLH39_03925 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLH39_03925 IPR013815 ATP-grasp fold, subdomain 1 CLH39_03925 IPR011761 ATP-grasp fold CLH39_03925 IPR016185 Pre-ATP-grasp domain superfamily CLH39_03925 IPR011054 Rudiment single hybrid motif CLH39_03925 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CLH39_03930 IPR004498 Ribosomal protein L11 methyltransferase CLH39_03930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_03940 IPR011611 Carbohydrate kinase PfkB CLH39_03940 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLH39_03940 IPR029056 Ribokinase-like CLH39_03945 IPR008816 Glycine zipper 2TM domain CLH39_03950 IPR009057 Homeobox-like domain superfamily CLH39_03950 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CLH39_03950 IPR035451 Ada-like domain superfamily CLH39_03950 IPR018062 HTH domain AraC-type, conserved site CLH39_03950 IPR018060 DNA binding HTH domain, AraC-type CLH39_03950 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CLH39_03950 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CLH39_03950 IPR016221 Bifunctional regulatory protein Ada CLH39_03950 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03950 IPR004026 Ada DNA repair, metal-binding CLH39_03950 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CLH39_03950 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLH39_03955 IPR003425 CCB3/YggT CLH39_03970 IPR000485 AsnC-type HTH domain CLH39_03970 IPR036390 Winged helix DNA-binding domain superfamily CLH39_03970 IPR011008 Dimeric alpha-beta barrel CLH39_03970 IPR019888 Transcription regulator AsnC-type CLH39_03970 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLH39_03970 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03970 IPR011991 ArsR-like helix-turn-helix domain CLH39_03980 IPR011335 Restriction endonuclease type II-like CLH39_03980 IPR009822 YaeQ CLH39_03980 IPR038590 YaeQ superfamily CLH39_03985 IPR033910 Glutamyl-tRNA synthetase CLH39_03985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_03985 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLH39_03985 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_03985 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CLH39_03985 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CLH39_03985 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLH39_03985 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 CLH39_03990 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_03990 IPR000792 Transcription regulator LuxR, C-terminal CLH39_03990 IPR001789 Signal transduction response regulator, receiver domain CLH39_03990 IPR011006 CheY-like superfamily CLH39_03995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_03995 IPR011006 CheY-like superfamily CLH39_03995 IPR035965 PAS domain superfamily CLH39_03995 IPR013656 PAS fold-4 CLH39_03995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_03995 IPR001789 Signal transduction response regulator, receiver domain CLH39_03995 IPR005467 Histidine kinase domain CLH39_03995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_03995 IPR000700 PAS-associated, C-terminal CLH39_03995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_03995 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_03995 IPR001610 PAC motif CLH39_03995 IPR000014 PAS domain CLH39_04000 IPR023214 HAD superfamily CLH39_04000 IPR001757 P-type ATPase CLH39_04000 IPR006068 Cation-transporting P-type ATPase, C-terminal CLH39_04000 IPR006415 P-type ATPase, subfamily IIIB CLH39_04000 IPR004014 Cation-transporting P-type ATPase, N-terminal CLH39_04000 IPR023299 P-type ATPase, cytoplasmic domain N CLH39_04000 IPR036412 HAD-like superfamily CLH39_04000 IPR018303 P-type ATPase, phosphorylation site CLH39_04000 IPR023298 P-type ATPase, transmembrane domain superfamily CLH39_04000 IPR008250 P-type ATPase, A domain superfamily CLH39_04010 IPR016181 Acyl-CoA N-acyltransferase CLH39_04010 IPR000182 GNAT domain CLH39_04025 IPR023153 PSPTO4464-like domain superfamily CLH39_04025 IPR006839 Ribosome-associated, YjgA CLH39_04030 IPR002510 Metalloprotease TldD/PmbA CLH39_04030 IPR035068 Metalloprotease TldD/PmbA, N-terminal CLH39_04030 IPR036059 Metalloprotease TldD/PmbA superfamily CLH39_04035 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_04035 IPR026289 Solute binding protein, TakP-like CLH39_04035 IPR041722 Alpha-keto acid binding periplasmic protein CLH39_04035 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_04035 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_04040 IPR005823 Ribosomal protein L13, bacterial-type CLH39_04040 IPR005822 Ribosomal protein L13 CLH39_04040 IPR036899 Ribosomal protein L13 superfamily CLH39_04045 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_04045 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_04045 IPR020574 Ribosomal protein S9, conserved site CLH39_04045 IPR023035 Ribosomal protein S9, bacterial/plastid CLH39_04045 IPR000754 Ribosomal protein S9 CLH39_04050 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CLH39_04050 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CLH39_04050 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CLH39_04050 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLH39_04050 IPR036291 NAD(P)-binding domain superfamily CLH39_04060 IPR023063 FeS cluster insertion protein ErpA CLH39_04060 IPR000361 FeS cluster biogenesis CLH39_04060 IPR016092 FeS cluster insertion protein CLH39_04060 IPR035903 HesB-like domain superfamily CLH39_04060 IPR017870 FeS cluster insertion, C-terminal, conserved site CLH39_04065 IPR005338 Anhydro-N-acetylmuramic acid kinase CLH39_04070 IPR016047 Peptidase M23 CLH39_04070 IPR007340 Opacity-associated protein A CLH39_04070 IPR011055 Duplicated hybrid motif CLH39_04075 IPR024088 Tyrosine-tRNA ligase, bacterial-type CLH39_04075 IPR002307 Tyrosine-tRNA ligase CLH39_04075 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CLH39_04075 IPR036986 RNA-binding S4 domain superfamily CLH39_04075 IPR002942 RNA-binding S4 domain CLH39_04075 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_04075 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLH39_04075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_04080 IPR005247 YbhB/YbcL CLH39_04080 IPR008914 Phosphatidylethanolamine-binding protein CLH39_04080 IPR036610 PEBP-like superfamily CLH39_04085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_04085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_04085 IPR039429 Serine hydroxymethyltransferase-like domain CLH39_04085 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CLH39_04085 IPR001085 Serine hydroxymethyltransferase CLH39_04085 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_04090 IPR005144 ATP-cone domain CLH39_04090 IPR003796 Ribonucleotide reductase regulator NrdR-like CLH39_04095 IPR016192 APOBEC/CMP deaminase, zinc-binding CLH39_04095 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CLH39_04095 IPR011549 Riboflavin-specific deaminase, C-terminal CLH39_04095 IPR004794 Riboflavin biosynthesis protein RibD CLH39_04095 IPR024072 Dihydrofolate reductase-like domain superfamily CLH39_04095 IPR016193 Cytidine deaminase-like CLH39_04095 IPR002125 Cytidine and deoxycytidylate deaminase domain CLH39_04105 IPR002818 DJ-1/PfpI CLH39_04105 IPR009057 Homeobox-like domain superfamily CLH39_04105 IPR018060 DNA binding HTH domain, AraC-type CLH39_04105 IPR018062 HTH domain AraC-type, conserved site CLH39_04105 IPR029062 Class I glutamine amidotransferase-like CLH39_04120 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLH39_04120 IPR006234 O-succinylhomoserine sulfhydrylase CLH39_04120 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_04120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_04120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_04135 IPR013727 Two-component sensor kinase, N-terminal CLH39_04135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_04135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_04135 IPR005467 Histidine kinase domain CLH39_04135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_04135 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_04135 IPR003660 HAMP domain CLH39_04135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_04140 IPR011006 CheY-like superfamily CLH39_04140 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_04140 IPR039420 Transcriptional regulatory protein WalR-like CLH39_04140 IPR001789 Signal transduction response regulator, receiver domain CLH39_04140 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04145 IPR029039 Flavoprotein-like superfamily CLH39_04145 IPR014063 Arsenate resistance ArsH CLH39_04145 IPR005025 NADPH-dependent FMN reductase-like CLH39_04150 IPR036249 Thioredoxin-like superfamily CLH39_04150 IPR006659 Arsenate reductase CLH39_04150 IPR006660 Arsenate reductase-like CLH39_04155 IPR000802 Arsenical pump membrane protein, ArsB CLH39_04165 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_04165 IPR018313 Solute-binding protein family 3, conserved site CLH39_04165 IPR001320 Ionotropic glutamate receptor CLH39_04170 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04170 IPR005119 LysR, substrate-binding CLH39_04170 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 CLH39_04170 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04170 IPR000847 Transcription regulator HTH, LysR CLH39_04175 IPR001123 Amino acid exporter protein, LeuE-type CLH39_04185 IPR042099 AMP-dependent synthetase-like superfamily CLH39_04185 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_04185 IPR000873 AMP-dependent synthetase/ligase CLH39_04185 IPR020845 AMP-binding, conserved site CLH39_04200 IPR001279 Metallo-beta-lactamase CLH39_04200 IPR029228 Alkyl sulfatase dimerisation domain CLH39_04200 IPR029229 Alkyl sulfatase, C-terminal CLH39_04200 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily CLH39_04200 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLH39_04200 IPR036527 SCP2 sterol-binding domain superfamily CLH39_04220 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_04220 IPR029045 ClpP/crotonase-like domain superfamily CLH39_04220 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_04220 IPR014748 Enoyl-CoA hydratase, C-terminal CLH39_04225 IPR023606 CoA-transferase family III domain superfamily CLH39_04225 IPR003673 CoA-transferase family III CLH39_04230 IPR036291 NAD(P)-binding domain superfamily CLH39_04230 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_04230 IPR014188 Acrylyl-CoA reductase AcuI CLH39_04230 IPR020843 Polyketide synthase, enoylreductase domain CLH39_04230 IPR013149 Alcohol dehydrogenase, C-terminal CLH39_04230 IPR011032 GroES-like superfamily CLH39_04235 IPR005064 Bordetella uptake gene CLH39_04235 IPR042100 Bordetella uptake gene, domain 1 CLH39_04240 IPR011761 ATP-grasp fold CLH39_04240 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CLH39_04240 IPR013815 ATP-grasp fold, subdomain 1 CLH39_04240 IPR003781 CoA-binding CLH39_04240 IPR016102 Succinyl-CoA synthetase-like CLH39_04240 IPR036291 NAD(P)-binding domain superfamily CLH39_04245 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_04245 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_04245 IPR014748 Enoyl-CoA hydratase, C-terminal CLH39_04245 IPR029045 ClpP/crotonase-like domain superfamily CLH39_04250 IPR011051 RmlC-like cupin domain superfamily CLH39_04250 IPR014710 RmlC-like jelly roll fold CLH39_04250 IPR010300 Cysteine dioxygenase type I CLH39_04265 IPR023214 HAD superfamily CLH39_04265 IPR036412 HAD-like superfamily CLH39_04265 IPR003337 Trehalose-phosphatase CLH39_04265 IPR006379 HAD-superfamily hydrolase, subfamily IIB CLH39_04270 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_04270 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_04270 IPR036291 NAD(P)-binding domain superfamily CLH39_04285 IPR001830 Glycosyl transferase, family 20 CLH39_04285 IPR012766 Alpha,alpha-trehalose-phosphate synthase CLH39_04290 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CLH39_04290 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLH39_04290 IPR007046 RNA polymerase sigma factor 54, core-binding domain CLH39_04290 IPR000394 RNA polymerase sigma factor 54 CLH39_04300 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_04300 IPR025944 Sigma-54 interaction domain, conserved site CLH39_04300 IPR009057 Homeobox-like domain superfamily CLH39_04300 IPR002197 DNA binding HTH domain, Fis-type CLH39_04300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04300 IPR010523 Activator of aromatic catabolism CLH39_04300 IPR003593 AAA+ ATPase domain CLH39_04300 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_04300 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_04300 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CLH39_04300 IPR004096 4-vinyl reductase, 4VR CLH39_04305 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_04305 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04305 IPR002197 DNA binding HTH domain, Fis-type CLH39_04305 IPR009057 Homeobox-like domain superfamily CLH39_04305 IPR029016 GAF-like domain superfamily CLH39_04305 IPR003018 GAF domain CLH39_04305 IPR025944 Sigma-54 interaction domain, conserved site CLH39_04305 IPR003593 AAA+ ATPase domain CLH39_04310 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLH39_04310 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CLH39_04335 IPR040503 UPF0176, acylphosphatase-like domain CLH39_04335 IPR001763 Rhodanese-like domain CLH39_04335 IPR020936 Uncharacterised protein family UPF0176 CLH39_04335 IPR036873 Rhodanese-like domain superfamily CLH39_04345 IPR018107 Sodium:dicarboxylate symporter, conserved site CLH39_04345 IPR036458 Sodium:dicarboxylate symporter superfamily CLH39_04345 IPR001991 Sodium:dicarboxylate symporter CLH39_04345 IPR023954 C4-dicarboxylate transport protein CLH39_04350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_04350 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CLH39_04350 IPR033479 Double Cache domain 1 CLH39_04350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_04350 IPR029151 Periplasmic sensor-like domain superfamily CLH39_04350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_04350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_04350 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_04350 IPR005467 Histidine kinase domain CLH39_04355 IPR003593 AAA+ ATPase domain CLH39_04355 IPR011006 CheY-like superfamily CLH39_04355 IPR009057 Homeobox-like domain superfamily CLH39_04355 IPR002197 DNA binding HTH domain, Fis-type CLH39_04355 IPR001789 Signal transduction response regulator, receiver domain CLH39_04355 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_04355 IPR025944 Sigma-54 interaction domain, conserved site CLH39_04355 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_04355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04355 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_04360 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04360 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04360 IPR023187 Transcriptional regulator MarR-type, conserved site CLH39_04360 IPR000835 MarR-type HTH domain CLH39_04370 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLH39_04370 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLH39_04370 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLH39_04370 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CLH39_04375 IPR036884 [2Fe-2S]-binding domain superfamily CLH39_04375 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_04375 IPR012675 Beta-grasp domain superfamily CLH39_04375 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_04375 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_04375 IPR002888 [2Fe-2S]-binding CLH39_04380 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_04380 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_04380 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CLH39_04380 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLH39_04380 IPR016166 FAD-binding domain, PCMH-type CLH39_04380 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLH39_04385 IPR015168 SsuA/THI5-like CLH39_04390 IPR042100 Bordetella uptake gene, domain 1 CLH39_04390 IPR005064 Bordetella uptake gene CLH39_04395 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CLH39_04395 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_04395 IPR036291 NAD(P)-binding domain superfamily CLH39_04400 IPR000189 Prokaryotic transglycosylase, active site CLH39_04400 IPR023346 Lysozyme-like domain superfamily CLH39_04400 IPR036779 LysM domain superfamily CLH39_04400 IPR018392 LysM domain CLH39_04400 IPR008258 Transglycosylase SLT domain 1 CLH39_04405 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CLH39_04405 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CLH39_04405 IPR017782 Hydroxyacylglutathione hydrolase CLH39_04405 IPR001279 Metallo-beta-lactamase CLH39_04405 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLH39_04410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_04410 IPR026669 Arsenite methyltransferase-like CLH39_04410 IPR013216 Methyltransferase type 11 CLH39_04415 IPR036397 Ribonuclease H superfamily CLH39_04415 IPR012337 Ribonuclease H-like superfamily CLH39_04415 IPR022892 Ribonuclease HI CLH39_04415 IPR002156 Ribonuclease H domain CLH39_04420 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLH39_04420 IPR022824 Multidrug resistance protein MdtA CLH39_04420 IPR006143 RND efflux pump, membrane fusion protein CLH39_04425 IPR001036 Acriflavin resistance protein CLH39_04425 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLH39_04430 IPR036397 Ribonuclease H superfamily CLH39_04430 IPR013520 Exonuclease, RNase T/DNA polymerase III CLH39_04430 IPR012337 Ribonuclease H-like superfamily CLH39_04430 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CLH39_04430 IPR006309 DNA polymerase 3, epsilon subunit CLH39_04440 IPR042100 Bordetella uptake gene, domain 1 CLH39_04440 IPR005064 Bordetella uptake gene CLH39_04445 IPR032466 Metal-dependent hydrolase CLH39_04445 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_04445 IPR023512 Deaminase MtaD/DadD CLH39_04445 IPR006680 Amidohydrolase-related CLH39_04450 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04450 IPR000847 Transcription regulator HTH, LysR CLH39_04450 IPR005119 LysR, substrate-binding CLH39_04450 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04455 IPR006161 Conserved hypothetical protein CHP00336 CLH39_04455 IPR006160 Short chain fatty acid transporter AtoE CLH39_04460 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_04460 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_04460 IPR012910 TonB-dependent receptor, plug domain CLH39_04460 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_04460 IPR010916 TonB box, conserved site CLH39_04460 IPR010101 TonB-dependent vitamin B12 transporter BtuB CLH39_04460 IPR039426 Vitamin B12 transporter BtuB-like CLH39_04470 IPR000522 ABC transporter, permease protein, BtuC-like CLH39_04470 IPR037294 ABC transporter, BtuC-like CLH39_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04475 IPR017871 ABC transporter, conserved site CLH39_04475 IPR003439 ABC transporter-like CLH39_04475 IPR003593 AAA+ ATPase domain CLH39_04480 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04480 IPR023187 Transcriptional regulator MarR-type, conserved site CLH39_04480 IPR000835 MarR-type HTH domain CLH39_04480 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04490 IPR000073 Alpha/beta hydrolase fold-1 CLH39_04490 IPR029058 Alpha/Beta hydrolase fold CLH39_04500 IPR036380 Isochorismatase-like superfamily CLH39_04500 IPR000868 Isochorismatase-like CLH39_04510 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_04510 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_04510 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CLH39_04510 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CLH39_04510 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_04515 IPR028202 Reductase, C-terminal CLH39_04515 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLH39_04515 IPR023753 FAD/NAD(P)-binding domain CLH39_04515 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_04520 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_04520 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_04525 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_04525 IPR026289 Solute binding protein, TakP-like CLH39_04525 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_04525 IPR041722 Alpha-keto acid binding periplasmic protein CLH39_04525 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_04530 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLH39_04530 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLH39_04530 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLH39_04530 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CLH39_04535 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLH39_04535 IPR016166 FAD-binding domain, PCMH-type CLH39_04535 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily CLH39_04535 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLH39_04535 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_04535 IPR016167 FAD-binding, type PCMH, subdomain 1 CLH39_04535 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_04540 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_04540 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_04540 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_04540 IPR012675 Beta-grasp domain superfamily CLH39_04540 IPR036884 [2Fe-2S]-binding domain superfamily CLH39_04540 IPR002888 [2Fe-2S]-binding CLH39_04550 IPR015859 ABC transporter, taurine import, TauD CLH39_04550 IPR003593 AAA+ ATPase domain CLH39_04550 IPR003439 ABC transporter-like CLH39_04550 IPR017871 ABC transporter, conserved site CLH39_04550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_04555 IPR035906 MetI-like superfamily CLH39_04565 IPR004681 TRAP transporter large membrane protein DctM CLH39_04565 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_04570 IPR003777 XdhC- CoxI CLH39_04570 IPR027051 XdhC Rossmann domain CLH39_04570 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CLH39_04575 IPR029056 Ribokinase-like CLH39_04575 IPR004443 YjeF N-terminal domain CLH39_04575 IPR036652 YjeF N-terminal domain superfamily CLH39_04575 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CLH39_04575 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CLH39_04575 IPR017953 Carbohydrate kinase, predicted, conserved site CLH39_04585 IPR025202 Phospholipase D-like domain CLH39_04585 IPR030871 Cardiolipin synthase C CLH39_04585 IPR001736 Phospholipase D/Transphosphatidylase CLH39_04595 IPR000524 Transcription regulator HTH, GntR CLH39_04595 IPR011663 UbiC transcription regulator-associated CLH39_04595 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04595 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04595 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLH39_04600 IPR001279 Metallo-beta-lactamase CLH39_04600 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLH39_04600 IPR013471 Ribonuclease Z/BN CLH39_04610 IPR005064 Bordetella uptake gene CLH39_04610 IPR042100 Bordetella uptake gene, domain 1 CLH39_04615 IPR000917 Sulfatase, N-terminal CLH39_04615 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLH39_04615 IPR032506 Domain of unknown function DUF4976 CLH39_04615 IPR024607 Sulfatase, conserved site CLH39_04620 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04620 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04620 IPR000847 Transcription regulator HTH, LysR CLH39_04620 IPR005119 LysR, substrate-binding CLH39_04620 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain CLH39_04625 IPR000160 GGDEF domain CLH39_04625 IPR029787 Nucleotide cyclase CLH39_04625 IPR033424 Membrane-associated sensor domain CLH39_04630 IPR029055 Nucleophile aminohydrolases, N-terminal CLH39_04630 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase CLH39_04630 IPR033813 Penicillin G acylase, C-terminal CLH39_04630 IPR023343 Penicillin amidase type, domain 1 CLH39_04630 IPR014395 Penicillin/GL-7-ACA/AHL acylase CLH39_04640 IPR028082 Periplasmic binding protein-like I CLH39_04640 IPR000709 Leu/Ile/Val-binding protein CLH39_04640 IPR028081 Leucine-binding protein domain CLH39_04650 IPR003439 ABC transporter-like CLH39_04650 IPR003593 AAA+ ATPase domain CLH39_04650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04650 IPR017871 ABC transporter, conserved site CLH39_04650 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_04655 IPR017871 ABC transporter, conserved site CLH39_04655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04655 IPR003593 AAA+ ATPase domain CLH39_04655 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_04655 IPR003439 ABC transporter-like CLH39_04665 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLH39_04665 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLH39_04665 IPR009056 Cytochrome c-like domain CLH39_04665 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLH39_04665 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CLH39_04665 IPR036909 Cytochrome c-like domain superfamily CLH39_04670 IPR002888 [2Fe-2S]-binding CLH39_04670 IPR036884 [2Fe-2S]-binding domain superfamily CLH39_04670 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_04670 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_04670 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_04670 IPR012675 Beta-grasp domain superfamily CLH39_04675 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLH39_04675 IPR009056 Cytochrome c-like domain CLH39_04675 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLH39_04675 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CLH39_04675 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLH39_04675 IPR036909 Cytochrome c-like domain superfamily CLH39_04680 IPR000073 Alpha/beta hydrolase fold-1 CLH39_04680 IPR029058 Alpha/Beta hydrolase fold CLH39_04690 IPR036380 Isochorismatase-like superfamily CLH39_04690 IPR000868 Isochorismatase-like CLH39_04715 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CLH39_04715 IPR023787 Type III secretion system flagellar brake protein YcgR CLH39_04715 IPR012349 FMN-binding split barrel CLH39_04715 IPR009875 PilZ domain CLH39_04720 IPR036291 NAD(P)-binding domain superfamily CLH39_04720 IPR003462 Ornithine cyclodeaminase/mu-crystallin CLH39_04720 IPR023401 Ornithine cyclodeaminase, N-terminal CLH39_04730 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLH39_04730 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CLH39_04730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_04730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_04730 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_04745 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_04745 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_04750 IPR004821 Cytidyltransferase-like domain CLH39_04750 IPR001980 Phosphopantetheine adenylyltransferase CLH39_04750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_04755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_04755 IPR004398 RNA methyltransferase, RsmD CLH39_04755 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLH39_04760 IPR013822 Signal recognition particle SRP54, helical bundle CLH39_04760 IPR004390 Signal-recognition particle receptor FtsY CLH39_04760 IPR003593 AAA+ ATPase domain CLH39_04760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04760 IPR036225 SRP/SRP receptor, N-terminal CLH39_04760 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLH39_04760 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CLH39_04775 IPR036144 RibA-like superfamily CLH39_04775 IPR032677 GTP cyclohydrolase II CLH39_04775 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CLH39_04775 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CLH39_04780 IPR002180 Lumazine/riboflavin synthase CLH39_04780 IPR036467 Lumazine/riboflavin synthase superfamily CLH39_04780 IPR034964 Lumazine synthase CLH39_04785 IPR006027 NusB/RsmB/TIM44 CLH39_04785 IPR011605 NusB antitermination factor CLH39_04785 IPR035926 NusB-like superfamily CLH39_04790 IPR016188 PurM-like, N-terminal domain CLH39_04790 IPR036921 PurM-like, N-terminal domain superfamily CLH39_04790 IPR010918 PurM-like, C-terminal domain CLH39_04790 IPR006283 Thiamine-monophosphate kinase CLH39_04790 IPR036676 PurM-like, C-terminal domain superfamily CLH39_04795 IPR026037 Phosphatidylglycerophosphatase A CLH39_04795 IPR036681 PgpA-like superfamily CLH39_04795 IPR007686 YutG/PgpA domain CLH39_04800 IPR008136 CinA, C-terminal CLH39_04800 IPR036653 CinA-like, C-terminal CLH39_04805 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04805 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR CLH39_04805 IPR029016 GAF-like domain superfamily CLH39_04805 IPR014757 Transcription regulator IclR, C-terminal CLH39_04805 IPR005471 Transcription regulator IclR, N-terminal CLH39_04805 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04810 IPR042100 Bordetella uptake gene, domain 1 CLH39_04810 IPR005064 Bordetella uptake gene CLH39_04815 IPR023606 CoA-transferase family III domain superfamily CLH39_04815 IPR003673 CoA-transferase family III CLH39_04820 IPR011060 Ribulose-phosphate binding barrel CLH39_04820 IPR013785 Aldolase-type TIM barrel CLH39_04820 IPR001754 Orotidine 5'-phosphate decarboxylase domain CLH39_04820 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 CLH39_04820 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CLH39_04825 IPR036945 Diacylglycerol kinase (DAGK) superfamily CLH39_04825 IPR033718 Diacylglycerol kinase, prokaryotic CLH39_04825 IPR000829 DAGK family CLH39_04830 IPR027409 GroEL-like apical domain superfamily CLH39_04830 IPR002423 Chaperonin Cpn60/TCP-1 family CLH39_04830 IPR001844 Chaperonin Cpn60 CLH39_04830 IPR027413 GroEL-like equatorial domain superfamily CLH39_04830 IPR018370 Chaperonin Cpn60, conserved site CLH39_04830 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CLH39_04835 IPR020818 GroES chaperonin family CLH39_04835 IPR037124 GroES chaperonin superfamily CLH39_04835 IPR011032 GroES-like superfamily CLH39_04835 IPR018369 Chaperonin GroES, conserved site CLH39_04840 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase CLH39_04840 IPR011009 Protein kinase-like domain superfamily CLH39_04850 IPR000120 Amidase CLH39_04850 IPR020556 Amidase, conserved site CLH39_04850 IPR023631 Amidase signature domain CLH39_04850 IPR036928 Amidase signature (AS) superfamily CLH39_04855 IPR029787 Nucleotide cyclase CLH39_04855 IPR033424 Membrane-associated sensor domain CLH39_04855 IPR000160 GGDEF domain CLH39_04865 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CLH39_04865 IPR012093 Pirin CLH39_04865 IPR003829 Pirin, N-terminal domain CLH39_04865 IPR014710 RmlC-like jelly roll fold CLH39_04865 IPR011051 RmlC-like cupin domain superfamily CLH39_04870 IPR000847 Transcription regulator HTH, LysR CLH39_04870 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04870 IPR005119 LysR, substrate-binding CLH39_04870 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04880 IPR002505 Phosphate acetyl/butaryl transferase CLH39_04880 IPR012147 Phosphate acetyl/butyryltransferase CLH39_04885 IPR023865 Aliphatic acid kinase, short-chain, conserved site CLH39_04885 IPR000890 Aliphatic acid kinase, short-chain CLH39_04885 IPR004372 Acetate/propionate kinase CLH39_04890 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLH39_04890 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CLH39_04890 IPR031157 Tr-type G domain, conserved site CLH39_04890 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_04890 IPR000795 Transcription factor, GTP-binding domain CLH39_04890 IPR011779 Sulphate adenylyltransferase, large subunit CLH39_04890 IPR005225 Small GTP-binding protein domain CLH39_04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04900 IPR000620 EamA domain CLH39_04905 IPR004839 Aminotransferase, class I/classII CLH39_04905 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_04905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_04905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_04910 IPR013766 Thioredoxin domain CLH39_04910 IPR036249 Thioredoxin-like superfamily CLH39_04910 IPR017559 Alkyl hydroperoxide reductase subunit C CLH39_04910 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLH39_04910 IPR019479 Peroxiredoxin, C-terminal CLH39_04910 IPR024706 Peroxiredoxin, AhpC-type CLH39_04915 IPR023753 FAD/NAD(P)-binding domain CLH39_04915 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLH39_04915 IPR012336 Thioredoxin-like fold CLH39_04915 IPR036249 Thioredoxin-like superfamily CLH39_04915 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_04915 IPR002109 Glutaredoxin CLH39_04915 IPR012081 Alkyl hydroperoxide reductase subunit F CLH39_04920 IPR036390 Winged helix DNA-binding domain superfamily CLH39_04920 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_04920 IPR000847 Transcription regulator HTH, LysR CLH39_04920 IPR005119 LysR, substrate-binding CLH39_04925 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CLH39_04925 IPR037171 NagB/RpiA transferase-like CLH39_04925 IPR003702 Acetyl-CoA hydrolase/transferase CLH39_04925 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CLH39_04925 IPR017821 Succinate CoA transferase CLH39_04930 IPR001123 Amino acid exporter protein, LeuE-type CLH39_04930 IPR004778 Homoserine/Threonine efflux protein CLH39_04935 IPR000846 Dihydrodipicolinate reductase, N-terminal CLH39_04935 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal CLH39_04935 IPR010190 Diaminopimelate dehydrogenase, Ddh CLH39_04935 IPR036291 NAD(P)-binding domain superfamily CLH39_04945 IPR003593 AAA+ ATPase domain CLH39_04945 IPR003439 ABC transporter-like CLH39_04945 IPR017871 ABC transporter, conserved site CLH39_04945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_04950 IPR001851 ABC transporter, permease CLH39_04950 IPR002229 Blood group Rhesus C/E/D polypeptide CLH39_04955 IPR001851 ABC transporter, permease CLH39_04960 IPR003760 ABC transporter substrate-binding protein PnrA-like CLH39_04965 IPR002528 Multi antimicrobial extrusion protein CLH39_04980 IPR029058 Alpha/Beta hydrolase fold CLH39_04980 IPR000073 Alpha/beta hydrolase fold-1 CLH39_04980 IPR000639 Epoxide hydrolase-like CLH39_04990 IPR006690 Outer membrane protein, OmpA-like, conserved site CLH39_04990 IPR039001 Peptidoglycan-associated lipoprotein CLH39_04990 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CLH39_04990 IPR036737 OmpA-like domain superfamily CLH39_04990 IPR006664 Outer membrane protein, bacterial CLH39_04990 IPR006665 OmpA-like domain CLH39_04995 IPR036752 TolB, N-terminal domain superfamily CLH39_04995 IPR007195 TolB, N-terminal CLH39_04995 IPR014167 Tol-Pal system protein TolB CLH39_04995 IPR011659 WD40-like Beta Propeller CLH39_04995 IPR011042 Six-bladed beta-propeller, TolB-like CLH39_05005 IPR014168 Tol-Pal system protein TolR CLH39_05005 IPR003400 Biopolymer transport protein ExbD/TolR CLH39_05010 IPR002898 MotA/TolQ/ExbB proton channel CLH39_05010 IPR014163 Tol-Pal system, TolQ CLH39_05015 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CLH39_05015 IPR029069 HotDog domain superfamily CLH39_05015 IPR006683 Thioesterase domain CLH39_05015 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CLH39_05015 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CLH39_05020 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CLH39_05020 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLH39_05020 IPR033730 Prokaryote proline-tRNA ligase core domain CLH39_05020 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CLH39_05020 IPR002316 Proline-tRNA ligase, class IIa CLH39_05020 IPR036621 Anticodon-binding domain superfamily CLH39_05020 IPR006195 Aminoacyl-tRNA synthetase, class II CLH39_05020 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CLH39_05020 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CLH39_05020 IPR004154 Anticodon-binding CLH39_05025 IPR015797 NUDIX hydrolase-like domain superfamily CLH39_05025 IPR022927 RNA pyrophosphohydrolase RppH CLH39_05025 IPR000086 NUDIX hydrolase domain CLH39_05025 IPR020084 NUDIX hydrolase, conserved site CLH39_05025 IPR020476 NUDIX hydrolase CLH39_05030 IPR001789 Signal transduction response regulator, receiver domain CLH39_05030 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05030 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_05030 IPR011006 CheY-like superfamily CLH39_05030 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_05030 IPR039420 Transcriptional regulatory protein WalR-like CLH39_05035 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_05035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_05035 IPR005467 Histidine kinase domain CLH39_05035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_05035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_05035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_05040 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_05040 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLH39_05040 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLH39_05040 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLH39_05040 IPR036291 NAD(P)-binding domain superfamily CLH39_05040 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLH39_05040 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_05045 IPR006059 Bacterial extracellular solute-binding protein CLH39_05045 IPR026045 Ferric binding protein CLH39_05050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05050 IPR015853 ABC transporter, ferric cation import, FbpC CLH39_05050 IPR017871 ABC transporter, conserved site CLH39_05050 IPR013611 Transport-associated OB, type 2 CLH39_05050 IPR003439 ABC transporter-like CLH39_05050 IPR003593 AAA+ ATPase domain CLH39_05050 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_05055 IPR035906 MetI-like superfamily CLH39_05055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_05060 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_05060 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLH39_05060 IPR032503 FAD dependent oxidoreductase, central domain CLH39_05060 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CLH39_05060 IPR006076 FAD dependent oxidoreductase CLH39_05060 IPR006222 Aminomethyltransferase, folate-binding domain CLH39_05060 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CLH39_05065 IPR002823 Protein of unknown function DUF112, transmembrane CLH39_05090 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CLH39_05095 IPR036909 Cytochrome c-like domain superfamily CLH39_05095 IPR002324 Cytochrome c, class ID CLH39_05095 IPR009056 Cytochrome c-like domain CLH39_05100 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CLH39_05100 IPR002569 Peptide methionine sulphoxide reductase MsrA CLH39_05110 IPR007272 Sulphur transport domain CLH39_05115 IPR001763 Rhodanese-like domain CLH39_05115 IPR036873 Rhodanese-like domain superfamily CLH39_05115 IPR001307 Thiosulphate sulfurtransferase, conserved site CLH39_05165 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily CLH39_05165 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CLH39_05165 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CLH39_05165 IPR002081 Cryptochrome/DNA photolyase class 1 CLH39_05165 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CLH39_05165 IPR006050 DNA photolyase, N-terminal CLH39_05165 IPR019947 DNA photolyase class 1, 8-HDF type CLH39_05165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_05175 IPR004721 Dihydroorotase homodimeric type CLH39_05175 IPR002195 Dihydroorotase, conserved site CLH39_05175 IPR032466 Metal-dependent hydrolase CLH39_05175 IPR006680 Amidohydrolase-related CLH39_05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05185 IPR008824 RuvB-like P-loop domain CLH39_05185 IPR041445 RuvB, AAA lid domain CLH39_05185 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05185 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05185 IPR008823 RuvB C-terminal winged helix domain CLH39_05185 IPR003593 AAA+ ATPase domain CLH39_05185 IPR004605 DNA helicase, Holliday junction RuvB-type CLH39_05190 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_05190 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLH39_05190 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_05195 IPR012340 Nucleic acid-binding, OB-fold CLH39_05195 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CLH39_05195 IPR036267 RuvA, C-terminal domain superfamily CLH39_05195 IPR010994 RuvA domain 2-like CLH39_05195 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CLH39_05195 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLH39_05195 IPR000085 Bacterial DNA recombination protein RuvA CLH39_05200 IPR012337 Ribonuclease H-like superfamily CLH39_05200 IPR036397 Ribonuclease H superfamily CLH39_05200 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CLH39_05200 IPR002176 Crossover junction endodeoxyribonuclease RuvC CLH39_05205 IPR016193 Cytidine deaminase-like CLH39_05205 IPR024051 AICAR transformylase, duplicated domain superfamily CLH39_05205 IPR002695 Bifunctional purine biosynthesis protein PurH-like CLH39_05205 IPR011607 Methylglyoxal synthase-like domain CLH39_05205 IPR036914 Methylglyoxal synthase-like domain superfamily CLH39_05210 IPR002197 DNA binding HTH domain, Fis-type CLH39_05210 IPR009057 Homeobox-like domain superfamily CLH39_05210 IPR005412 DNA-binding protein Fis CLH39_05215 IPR013785 Aldolase-type TIM barrel CLH39_05215 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CLH39_05215 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CLH39_05215 IPR032887 tRNA-dihydrouridine synthase B CLH39_05215 IPR001269 tRNA-dihydrouridine synthase CLH39_05215 IPR018517 tRNA-dihydrouridine synthase, conserved site CLH39_05215 IPR035587 DUS-like, FMN-binding domain CLH39_05220 IPR002938 FAD-binding domain CLH39_05220 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CLH39_05220 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CLH39_05220 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CLH39_05220 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_05240 IPR001915 Peptidase M48 CLH39_05240 IPR030873 Beta-barrel assembly-enhancing protease CLH39_05240 IPR011990 Tetratricopeptide-like helical domain superfamily CLH39_05245 IPR000073 Alpha/beta hydrolase fold-1 CLH39_05245 IPR029058 Alpha/Beta hydrolase fold CLH39_05245 IPR012020 AB hydrolase 4 family CLH39_05245 IPR000952 AB hydrolase 4, conserved site CLH39_05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05265 IPR014014 RNA helicase, DEAD-box type, Q motif CLH39_05265 IPR001650 Helicase, C-terminal CLH39_05265 IPR011545 DEAD/DEAH box helicase domain CLH39_05265 IPR028622 ATP-dependent RNA helicase RhlE CLH39_05265 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_05265 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLH39_05285 IPR014757 Transcription regulator IclR, C-terminal CLH39_05285 IPR029016 GAF-like domain superfamily CLH39_05285 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05285 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05285 IPR005471 Transcription regulator IclR, N-terminal CLH39_05300 IPR001295 Dihydroorotate dehydrogenase, conserved site CLH39_05300 IPR013785 Aldolase-type TIM barrel CLH39_05300 IPR005720 Dihydroorotate dehydrogenase domain CLH39_05300 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CLH39_05300 IPR005719 Dihydroorotate dehydrogenase, class 2 CLH39_05305 IPR007471 N-end aminoacyl transferase, N-terminal CLH39_05305 IPR007472 N-end rule aminoacyl transferase, C-terminal CLH39_05305 IPR016181 Acyl-CoA N-acyltransferase CLH39_05305 IPR017138 Aspartate/glutamate leucyltransferase CLH39_05305 IPR030700 N-end rule aminoacyl transferase CLH39_05310 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CLH39_05310 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CLH39_05310 IPR016181 Acyl-CoA N-acyltransferase CLH39_05325 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05325 IPR023187 Transcriptional regulator MarR-type, conserved site CLH39_05325 IPR000835 MarR-type HTH domain CLH39_05325 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05330 IPR018951 Fumarase C, C-terminal CLH39_05330 IPR000362 Fumarate lyase family CLH39_05330 IPR004708 Aspartate ammonia-lyase CLH39_05330 IPR008948 L-Aspartase-like CLH39_05330 IPR022761 Fumarate lyase, N-terminal CLH39_05330 IPR020557 Fumarate lyase, conserved site CLH39_05330 IPR024083 Fumarase/histidase, N-terminal CLH39_05340 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal CLH39_05340 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal CLH39_05340 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLH39_05340 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLH39_05340 IPR005956 4-hydroxyphenylpyruvate dioxygenase CLH39_05340 IPR037523 Vicinal oxygen chelate (VOC) domain CLH39_05345 IPR013785 Aldolase-type TIM barrel CLH39_05345 IPR001093 IMP dehydrogenase/GMP reductase CLH39_05345 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CLH39_05345 IPR000644 CBS domain CLH39_05345 IPR005990 Inosine-5'-monophosphate dehydrogenase CLH39_05355 IPR012902 Prokaryotic N-terminal methylation site CLH39_05355 IPR000983 Bacterial general secretion pathway protein G-type pilin CLH39_05355 IPR010054 General secretion pathway protein G CLH39_05355 IPR013545 Type II secretion system protein G CLH39_05360 IPR002416 Type II secretion system protein H CLH39_05360 IPR012902 Prokaryotic N-terminal methylation site CLH39_05365 IPR010052 Type II secretion system protein I CLH39_05365 IPR012902 Prokaryotic N-terminal methylation site CLH39_05365 IPR003413 Type II secretion system protein I domain CLH39_05370 IPR010055 Type II secretion system protein J CLH39_05370 IPR012902 Prokaryotic N-terminal methylation site CLH39_05395 IPR004845 Type II secretion system GspD, conserved site CLH39_05395 IPR005644 NolW-like CLH39_05395 IPR013356 Type II secretion system GspD CLH39_05395 IPR001775 GspD/PilQ family CLH39_05395 IPR004846 Type II/III secretion system CLH39_05395 IPR038591 NolW-like superfamily CLH39_05400 IPR013369 Type II secretion system GspE CLH39_05400 IPR037257 General secretory system II, protein E, N-terminal superfamily CLH39_05400 IPR003593 AAA+ ATPase domain CLH39_05400 IPR001482 Type II/IV secretion system protein CLH39_05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05405 IPR003004 GspF/PilC family CLH39_05405 IPR011850 General secretion pathway protein F CLH39_05405 IPR001992 Type II secretion system conserved site CLH39_05405 IPR018076 Type II secretion system F domain CLH39_05405 IPR042094 Type II secretion system F domain superfamily CLH39_05410 IPR009057 Homeobox-like domain superfamily CLH39_05410 IPR006119 Resolvase, N-terminal catalytic domain CLH39_05410 IPR006118 Recombinase, conserved site CLH39_05410 IPR006120 Resolvase, HTH domain CLH39_05410 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CLH39_05420 IPR008635 Coiled stalk of trimeric autotransporter adhesin CLH39_05420 IPR024973 ESPR domain CLH39_05420 IPR028230 Trimeric autotransporter adhesin, tryptophan-ring motif CLH39_05420 IPR037174 Trimeric adhesin CLH39_05420 IPR005594 YadA-like, C-terminal CLH39_05425 IPR036737 OmpA-like domain superfamily CLH39_05425 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CLH39_05425 IPR006664 Outer membrane protein, bacterial CLH39_05425 IPR006690 Outer membrane protein, OmpA-like, conserved site CLH39_05425 IPR006665 OmpA-like domain CLH39_05425 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CLH39_05425 IPR002368 Outer membrane protein, OmpA CLH39_05440 IPR008475 Bacterial phospholipase C, C-terminal domain CLH39_05440 IPR007312 Phosphoesterase CLH39_05440 IPR017767 Bacterial phospholipase C, phosphocholine-specific CLH39_05440 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_05440 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLH39_05455 IPR015942 Asp/Glu/hydantoin racemase CLH39_05455 IPR004391 Glutamate racemase CLH39_05455 IPR033134 Asp/Glu racemase, active site 2 CLH39_05455 IPR018187 Asp/Glu racemase, active site 1 CLH39_05455 IPR001920 Asp/Glu racemase CLH39_05460 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_05460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_05460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_05460 IPR005814 Aminotransferase class-III CLH39_05465 IPR000847 Transcription regulator HTH, LysR CLH39_05465 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05465 IPR005119 LysR, substrate-binding CLH39_05465 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05475 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_05475 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_05475 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_05475 IPR000524 Transcription regulator HTH, GntR CLH39_05475 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05475 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05475 IPR004839 Aminotransferase, class I/classII CLH39_05480 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CLH39_05480 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLH39_05480 IPR000883 Cytochrome c oxidase subunit I CLH39_05480 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLH39_05480 IPR023616 Cytochrome c oxidase-like, subunit I domain CLH39_05495 IPR000620 EamA domain CLH39_05505 IPR039570 AmiC, periplasmic binding domain CLH39_05505 IPR000709 Leu/Ile/Val-binding protein CLH39_05505 IPR028082 Periplasmic binding protein-like I CLH39_05525 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLH39_05525 IPR001036 Acriflavin resistance protein CLH39_05540 IPR015358 Transcription regulator MerR, DNA binding CLH39_05540 IPR010211 Redox-sensitive transcriptional activator SoxR CLH39_05540 IPR000551 MerR-type HTH domain CLH39_05540 IPR009061 Putative DNA-binding domain superfamily CLH39_05545 IPR018093 BCCT transporter, conserved site CLH39_05545 IPR000060 BCCT transporter family CLH39_05550 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase CLH39_05550 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLH39_05550 IPR004625 Pyridoxine kinase CLH39_05550 IPR029056 Ribokinase-like CLH39_05555 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CLH39_05555 IPR017926 Glutamine amidotransferase CLH39_05555 IPR029062 Class I glutamine amidotransferase-like CLH39_05555 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CLH39_05555 IPR006274 Carbamoyl-phosphate synthase, small subunit CLH39_05555 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CLH39_05570 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_05570 IPR039429 Serine hydroxymethyltransferase-like domain CLH39_05570 IPR001085 Serine hydroxymethyltransferase CLH39_05570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_05570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_05570 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CLH39_05575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_05575 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05575 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_05575 IPR004839 Aminotransferase, class I/classII CLH39_05575 IPR000524 Transcription regulator HTH, GntR CLH39_05575 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_05580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_05580 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_05580 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLH39_05580 IPR000192 Aminotransferase class V domain CLH39_05580 IPR022278 Phosphoserine aminotransferase CLH39_05585 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CLH39_05585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_05585 IPR039429 Serine hydroxymethyltransferase-like domain CLH39_05585 IPR001085 Serine hydroxymethyltransferase CLH39_05585 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_05585 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_05595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_05595 IPR018317 Queuosine biosynthesis protein QueC CLH39_05600 IPR003744 Queuosine precursor transporter CLH39_05610 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I CLH39_05610 IPR000073 Alpha/beta hydrolase fold-1 CLH39_05610 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain CLH39_05610 IPR029058 Alpha/Beta hydrolase fold CLH39_05615 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLH39_05615 IPR003423 Outer membrane efflux protein CLH39_05620 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLH39_05625 IPR017871 ABC transporter, conserved site CLH39_05625 IPR003593 AAA+ ATPase domain CLH39_05625 IPR003439 ABC transporter-like CLH39_05625 IPR000412 ABC-2 transporter CLH39_05625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05640 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_05640 IPR011283 Acetoacetyl-CoA reductase CLH39_05640 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_05640 IPR036291 NAD(P)-binding domain superfamily CLH39_05645 IPR016039 Thiolase-like CLH39_05645 IPR002155 Thiolase CLH39_05645 IPR020617 Thiolase, C-terminal CLH39_05645 IPR020616 Thiolase, N-terminal CLH39_05645 IPR020613 Thiolase, conserved site CLH39_05645 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_05645 IPR020610 Thiolase, active site CLH39_05650 IPR029058 Alpha/Beta hydrolase fold CLH39_05650 IPR024501 Protein of unknown function DUF3141 CLH39_05655 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_05655 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_05655 IPR036291 NAD(P)-binding domain superfamily CLH39_05660 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_05660 IPR036291 NAD(P)-binding domain superfamily CLH39_05660 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_05675 IPR020846 Major facilitator superfamily domain CLH39_05675 IPR011701 Major facilitator superfamily CLH39_05675 IPR036259 MFS transporter superfamily CLH39_05680 IPR004839 Aminotransferase, class I/classII CLH39_05680 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_05680 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_05680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_05680 IPR000524 Transcription regulator HTH, GntR CLH39_05680 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05685 IPR020556 Amidase, conserved site CLH39_05685 IPR000120 Amidase CLH39_05685 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLH39_05685 IPR036928 Amidase signature (AS) superfamily CLH39_05685 IPR023631 Amidase signature domain CLH39_05705 IPR000792 Transcription regulator LuxR, C-terminal CLH39_05705 IPR030864 Transcriptional regulatory protein RcsB CLH39_05705 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05705 IPR011006 CheY-like superfamily CLH39_05705 IPR001789 Signal transduction response regulator, receiver domain CLH39_05705 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_05710 IPR011006 CheY-like superfamily CLH39_05710 IPR001789 Signal transduction response regulator, receiver domain CLH39_05710 IPR005467 Histidine kinase domain CLH39_05710 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_05710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_05710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_05710 IPR030856 Sensor histidine kinase RcsC CLH39_05710 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CLH39_05710 IPR038388 RcsC, C-terminal domain superfamily CLH39_05710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_05710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_05715 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_05715 IPR005467 Histidine kinase domain CLH39_05715 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_05715 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_05715 IPR030856 Sensor histidine kinase RcsC CLH39_05715 IPR038388 RcsC, C-terminal domain superfamily CLH39_05715 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CLH39_05715 IPR001789 Signal transduction response regulator, receiver domain CLH39_05715 IPR011006 CheY-like superfamily CLH39_05715 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_05715 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_05720 IPR000015 Outer membrane usher protein CLH39_05720 IPR037224 PapC, N-terminal domain superfamily CLH39_05720 IPR018030 Fimbrial membrane usher, conserved site CLH39_05720 IPR042186 Outer membrane usher protein FimD, plug domain CLH39_05720 IPR025949 PapC-like, C-terminal domain CLH39_05720 IPR025885 PapC, N-terminal domain CLH39_05725 IPR001829 Pili assembly chaperone, bacterial CLH39_05725 IPR016148 Pili assembly chaperone, C-terminal CLH39_05725 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CLH39_05725 IPR018046 Pili assembly chaperone, conserved site CLH39_05725 IPR016147 Pili assembly chaperone, N-terminal CLH39_05725 IPR013783 Immunoglobulin-like fold CLH39_05725 IPR008962 PapD-like superfamily CLH39_05745 IPR005829 Sugar transporter, conserved site CLH39_05745 IPR011701 Major facilitator superfamily CLH39_05745 IPR020846 Major facilitator superfamily domain CLH39_05745 IPR036259 MFS transporter superfamily CLH39_05750 IPR000891 Pyruvate carboxyltransferase CLH39_05750 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain CLH39_05750 IPR012425 DmpG-like communication CLH39_05750 IPR017629 4-hydroxy-2-oxovalerate aldolase CLH39_05750 IPR013785 Aldolase-type TIM barrel CLH39_05755 IPR003361 Acetaldehyde dehydrogenase CLH39_05755 IPR015426 Acetaldehyde dehydrogenase, C-terminal CLH39_05755 IPR036291 NAD(P)-binding domain superfamily CLH39_05755 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLH39_05760 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLH39_05760 IPR011234 Fumarylacetoacetase-like, C-terminal CLH39_05760 IPR023793 2-keto-4-pentenoate hydratase CLH39_05765 IPR000073 Alpha/beta hydrolase fold-1 CLH39_05765 IPR000639 Epoxide hydrolase-like CLH39_05765 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase CLH39_05765 IPR029058 Alpha/Beta hydrolase fold CLH39_05770 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase CLH39_05770 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CLH39_05775 IPR028202 Reductase, C-terminal CLH39_05775 IPR023753 FAD/NAD(P)-binding domain CLH39_05775 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_05775 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLH39_05775 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit CLH39_05780 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_05780 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_05780 IPR023643 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase HcaB CLH39_05780 IPR036291 NAD(P)-binding domain superfamily CLH39_05785 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_05785 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_05785 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit CLH39_05790 IPR000391 Ring-hydroxylating dioxygenase beta subunit CLH39_05790 IPR032710 NTF2-like domain superfamily CLH39_05790 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit CLH39_05795 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CLH39_05795 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CLH39_05795 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit CLH39_05795 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_05795 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_05795 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_05800 IPR005119 LysR, substrate-binding CLH39_05800 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05800 IPR000847 Transcription regulator HTH, LysR CLH39_05800 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05810 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CLH39_05810 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_05810 IPR001650 Helicase, C-terminal CLH39_05810 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CLH39_05810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05810 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLH39_05810 IPR014014 RNA helicase, DEAD-box type, Q motif CLH39_05810 IPR011545 DEAD/DEAH box helicase domain CLH39_05810 IPR028619 ATP-dependent RNA helicase DbpA CLH39_05815 IPR029016 GAF-like domain superfamily CLH39_05815 IPR014757 Transcription regulator IclR, C-terminal CLH39_05815 IPR005471 Transcription regulator IclR, N-terminal CLH39_05815 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_05815 IPR036390 Winged helix DNA-binding domain superfamily CLH39_05820 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_05820 IPR015590 Aldehyde dehydrogenase domain CLH39_05820 IPR010102 Succinate semialdehyde dehydrogenase CLH39_05820 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_05820 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_05820 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_05820 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_05830 IPR001851 ABC transporter, permease CLH39_05840 IPR003593 AAA+ ATPase domain CLH39_05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05840 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CLH39_05840 IPR017871 ABC transporter, conserved site CLH39_05840 IPR003439 ABC transporter-like CLH39_05845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_05845 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_05845 IPR003439 ABC transporter-like CLH39_05845 IPR017871 ABC transporter, conserved site CLH39_05845 IPR003593 AAA+ ATPase domain CLH39_05850 IPR039697 Iron-type alcohol dehydrogenase-like CLH39_05850 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLH39_05850 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CLH39_05865 IPR025291 Protein of unknown function DUF4153 CLH39_05870 IPR000801 Putative esterase CLH39_05870 IPR029058 Alpha/Beta hydrolase fold CLH39_05875 IPR006452 Formate dehydrogenase accessory protein CLH39_05875 IPR024064 FdhE-like superfamily CLH39_05880 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CLH39_05880 IPR016174 Di-haem cytochrome, transmembrane CLH39_05880 IPR006471 Formate dehydrogenase, gamma subunit CLH39_05885 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CLH39_05885 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria CLH39_05885 IPR015246 Formate dehydrogenase, transmembrane CLH39_05885 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_05885 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_05885 IPR014603 Formate dehydrogenase iron-sulphur subunit CLH39_05890 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CLH39_05890 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CLH39_05890 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_05890 IPR006657 Molybdopterin dinucleotide-binding domain CLH39_05890 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CLH39_05890 IPR006443 Formate dehydrogenase-N, alpha subunit CLH39_05890 IPR009010 Aspartate decarboxylase-like domain superfamily CLH39_05890 IPR006656 Molybdopterin oxidoreductase CLH39_05900 IPR036259 MFS transporter superfamily CLH39_05900 IPR020846 Major facilitator superfamily domain CLH39_05900 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLH39_05900 IPR011701 Major facilitator superfamily CLH39_05905 IPR010105 TonB-dependent siderophore receptor CLH39_05905 IPR039423 TonB-dependent receptor-like CLH39_05905 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_05905 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_05905 IPR010917 TonB-dependent receptor, conserved site CLH39_05905 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_05905 IPR012910 TonB-dependent receptor, plug domain CLH39_05905 IPR011662 Secretin/TonB, short N-terminal domain CLH39_05920 IPR020846 Major facilitator superfamily domain CLH39_05920 IPR011701 Major facilitator superfamily CLH39_05920 IPR036259 MFS transporter superfamily CLH39_05940 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLH39_05945 IPR003423 Outer membrane efflux protein CLH39_05945 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLH39_05970 IPR016167 FAD-binding, type PCMH, subdomain 1 CLH39_05970 IPR016166 FAD-binding domain, PCMH-type CLH39_05970 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_05970 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CLH39_05970 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CLH39_05970 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CLH39_05970 IPR006094 FAD linked oxidase, N-terminal CLH39_05970 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_05980 IPR036458 Sodium:dicarboxylate symporter superfamily CLH39_05980 IPR001991 Sodium:dicarboxylate symporter CLH39_05980 IPR023954 C4-dicarboxylate transport protein CLH39_05980 IPR018107 Sodium:dicarboxylate symporter, conserved site CLH39_05985 IPR005829 Sugar transporter, conserved site CLH39_05985 IPR036259 MFS transporter superfamily CLH39_05985 IPR020846 Major facilitator superfamily domain CLH39_05985 IPR011701 Major facilitator superfamily CLH39_05990 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLH39_05990 IPR039697 Iron-type alcohol dehydrogenase-like CLH39_05990 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CLH39_05995 IPR029058 Alpha/Beta hydrolase fold CLH39_05995 IPR000073 Alpha/beta hydrolase fold-1 CLH39_05995 IPR000639 Epoxide hydrolase-like CLH39_06010 IPR023940 Dihydrodipicolinate reductase CLH39_06010 IPR036291 NAD(P)-binding domain superfamily CLH39_06010 IPR000846 Dihydrodipicolinate reductase, N-terminal CLH39_06010 IPR022663 Dihydrodipicolinate reductase, C-terminal CLH39_06010 IPR022664 Dihydrodipicolinate reductase, conserved site CLH39_06015 IPR037873 BamE-like CLH39_06015 IPR007450 Lipoprotein SmpA/OmlA CLH39_06015 IPR026592 Outer membrane protein assembly factor BamE CLH39_06020 IPR002481 Ferric-uptake regulator CLH39_06020 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_06020 IPR036390 Winged helix DNA-binding domain superfamily CLH39_06025 IPR004604 DNA recombination/repair protein RecN CLH39_06025 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06025 IPR003395 RecF/RecN/SMC, N-terminal CLH39_06030 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CLH39_06030 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CLH39_06030 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CLH39_06030 IPR002504 NAD kinase CLH39_06035 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain CLH39_06035 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CLH39_06035 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_06035 IPR036390 Winged helix DNA-binding domain superfamily CLH39_06035 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CLH39_06035 IPR002571 Heat-inducible transcription repressor HrcA CLH39_06035 IPR029016 GAF-like domain superfamily CLH39_06040 IPR033644 Ferrochelatase, C-terminal CLH39_06040 IPR019772 Ferrochelatase, active site CLH39_06040 IPR001015 Ferrochelatase CLH39_06040 IPR033659 Ferrochelatase, N-terminal CLH39_06045 IPR000740 GrpE nucleotide exchange factor CLH39_06045 IPR009012 GrpE nucleotide exchange factor, head CLH39_06045 IPR013805 GrpE nucleotide exchange factor, coiled-coil CLH39_06050 IPR013126 Heat shock protein 70 family CLH39_06050 IPR018181 Heat shock protein 70, conserved site CLH39_06050 IPR012725 Chaperone DnaK CLH39_06050 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CLH39_06050 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CLH39_06055 IPR012724 Chaperone DnaJ CLH39_06055 IPR008971 HSP40/DnaJ peptide-binding CLH39_06055 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CLH39_06055 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CLH39_06055 IPR001623 DnaJ domain CLH39_06055 IPR002939 Chaperone DnaJ, C-terminal CLH39_06055 IPR036869 Chaperone J-domain superfamily CLH39_06055 IPR018253 DnaJ domain, conserved site CLH39_06060 IPR011765 Peptidase M16, N-terminal CLH39_06060 IPR001431 Peptidase M16, zinc-binding site CLH39_06060 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CLH39_06060 IPR007863 Peptidase M16, C-terminal CLH39_06090 IPR034746 POTRA domain CLH39_06090 IPR013686 Polypeptide-transport-associated, ShlB-type CLH39_06090 IPR005565 Haemolysin activator HlyB, C-terminal CLH39_06120 IPR004846 Type II/III secretion system CLH39_06120 IPR007055 BON domain CLH39_06120 IPR032789 Pilus formation protein, N-terminal CLH39_06120 IPR014004 Transport-associated and nodulation domain, bacteria CLH39_06120 IPR001775 GspD/PilQ family CLH39_06130 IPR022399 Helicase/secretion neighbourhood ATPase CLH39_06130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06130 IPR001482 Type II/IV secretion system protein CLH39_06160 IPR003593 AAA+ ATPase domain CLH39_06160 IPR011006 CheY-like superfamily CLH39_06160 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_06160 IPR009057 Homeobox-like domain superfamily CLH39_06160 IPR002197 DNA binding HTH domain, Fis-type CLH39_06160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06160 IPR001789 Signal transduction response regulator, receiver domain CLH39_06160 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_06160 IPR025944 Sigma-54 interaction domain, conserved site CLH39_06160 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_06180 IPR000642 Peptidase M41 CLH39_06180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06180 IPR041569 AAA ATPase, AAA+ lid domain CLH39_06180 IPR005936 Peptidase, FtsH CLH39_06180 IPR037219 Peptidase M41-like CLH39_06180 IPR003960 ATPase, AAA-type, conserved site CLH39_06180 IPR003593 AAA+ ATPase domain CLH39_06180 IPR003959 ATPase, AAA-type, core CLH39_06185 IPR036909 Cytochrome c-like domain superfamily CLH39_06185 IPR024167 Cytochrome c4-like CLH39_06185 IPR009056 Cytochrome c-like domain CLH39_06200 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CLH39_06200 IPR024084 Isopropylmalate dehydrogenase-like domain CLH39_06200 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CLH39_06205 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_06205 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_06205 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CLH39_06205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_06205 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_06210 IPR019826 Carboxylesterase type B, active site CLH39_06210 IPR000997 Cholinesterase CLH39_06210 IPR019819 Carboxylesterase type B, conserved site CLH39_06210 IPR029058 Alpha/Beta hydrolase fold CLH39_06210 IPR002018 Carboxylesterase, type B CLH39_06230 IPR036259 MFS transporter superfamily CLH39_06230 IPR011701 Major facilitator superfamily CLH39_06230 IPR005829 Sugar transporter, conserved site CLH39_06230 IPR020846 Major facilitator superfamily domain CLH39_06240 IPR019734 Tetratricopeptide repeat CLH39_06240 IPR011990 Tetratricopeptide-like helical domain superfamily CLH39_06240 IPR013026 Tetratricopeptide repeat-containing domain CLH39_06250 IPR005982 Thioredoxin reductase CLH39_06250 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLH39_06250 IPR023753 FAD/NAD(P)-binding domain CLH39_06250 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_06255 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_06255 IPR025199 DNA translocase FtsK, 4TM region CLH39_06255 IPR036390 Winged helix DNA-binding domain superfamily CLH39_06255 IPR018541 FtsK gamma domain CLH39_06255 IPR002543 FtsK domain CLH39_06255 IPR041027 FtsK alpha domain CLH39_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06260 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CLH39_06260 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CLH39_06260 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLH39_06265 IPR032423 AAA C-terminal domain CLH39_06265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06265 IPR021886 MgsA AAA+ ATPase C-terminal CLH39_06265 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLH39_06265 IPR003959 ATPase, AAA-type, core CLH39_06265 IPR003593 AAA+ ATPase domain CLH39_06270 IPR015866 Serine-tRNA synthetase, type1, N-terminal CLH39_06270 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CLH39_06270 IPR033729 Serine-tRNA ligase catalytic core domain CLH39_06270 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CLH39_06270 IPR002317 Serine-tRNA ligase, type1 CLH39_06270 IPR006195 Aminoacyl-tRNA synthetase, class II CLH39_06270 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CLH39_06290 IPR036291 NAD(P)-binding domain superfamily CLH39_06290 IPR011294 3-hydroxybutyrate dehydrogenase CLH39_06290 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_06290 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_06295 IPR005583 Peroxide stress protein YaaA CLH39_06300 IPR032692 Integral membrane protein YccS, N-terminal CLH39_06305 IPR012846 Acetolactate synthase, large subunit, biosynthetic CLH39_06305 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLH39_06305 IPR039368 Acetolactate synthase large subunit, TPP binding domain CLH39_06305 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CLH39_06305 IPR012000 Thiamine pyrophosphate enzyme, central domain CLH39_06305 IPR029061 Thiamin diphosphate-binding fold CLH39_06305 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLH39_06305 IPR000399 TPP-binding enzyme, conserved site CLH39_06310 IPR019455 Acetolactate synthase, small subunit, C-terminal CLH39_06310 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CLH39_06310 IPR004789 Acetolactate synthase, small subunit CLH39_06310 IPR002912 ACT domain CLH39_06310 IPR039557 AHAS, ACT domain CLH39_06315 IPR013023 Ketol-acid reductoisomerase CLH39_06315 IPR036291 NAD(P)-binding domain superfamily CLH39_06315 IPR014359 Ketol-acid reductoisomerase, prokaryotic CLH39_06315 IPR013116 Ketol-acid reductoisomerase, N-terminal CLH39_06315 IPR000506 Ketol-acid reductoisomerase, C-terminal CLH39_06315 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_06320 IPR000462 CDP-alcohol phosphatidyltransferase CLH39_06320 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CLH39_06325 IPR000589 Ribosomal protein S15 CLH39_06325 IPR009068 S15/NS1, RNA-binding CLH39_06325 IPR005290 Ribosomal protein S15, bacterial-type CLH39_06330 IPR022967 RNA-binding domain, S1 CLH39_06330 IPR012340 Nucleic acid-binding, OB-fold CLH39_06330 IPR001247 Exoribonuclease, phosphorolytic domain 1 CLH39_06330 IPR012162 Polyribonucleotide nucleotidyltransferase CLH39_06330 IPR004087 K Homology domain CLH39_06330 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CLH39_06330 IPR004088 K Homology domain, type 1 CLH39_06330 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_06330 IPR027408 PNPase/RNase PH domain superfamily CLH39_06330 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CLH39_06330 IPR036612 K Homology domain, type 1 superfamily CLH39_06330 IPR003029 S1 domain CLH39_06330 IPR015847 Exoribonuclease, phosphorolytic domain 2 CLH39_06330 IPR036345 Exoribonuclease, PH domain 2 superfamily CLH39_06335 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_06335 IPR013108 Amidohydrolase 3 CLH39_06335 IPR032466 Metal-dependent hydrolase CLH39_06335 IPR033932 YtcJ like CLH39_06350 IPR020843 Polyketide synthase, enoylreductase domain CLH39_06350 IPR036291 NAD(P)-binding domain superfamily CLH39_06350 IPR011032 GroES-like superfamily CLH39_06350 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_06350 IPR013149 Alcohol dehydrogenase, C-terminal CLH39_06355 IPR020861 Triosephosphate isomerase, active site CLH39_06355 IPR035990 Triosephosphate isomerase superfamily CLH39_06355 IPR013785 Aldolase-type TIM barrel CLH39_06355 IPR000652 Triosephosphate isomerase CLH39_06355 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CLH39_06360 IPR004692 Preprotein translocase SecG subunit CLH39_06370 IPR033900 Porin domain, Gram-negative type CLH39_06370 IPR023614 Porin domain superfamily CLH39_06370 IPR001702 Porin, Gram-negative type CLH39_06370 IPR002299 Porin, Neisseria sp. type CLH39_06375 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CLH39_06375 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CLH39_06375 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CLH39_06380 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CLH39_06380 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CLH39_06385 IPR010218 NADH dehydrogenase, subunit C CLH39_06385 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CLH39_06385 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CLH39_06385 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CLH39_06390 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CLH39_06390 IPR029014 [NiFe]-hydrogenase, large subunit CLH39_06390 IPR001135 NADH-quinone oxidoreductase, subunit D CLH39_06390 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CLH39_06390 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CLH39_06395 IPR002023 NADH-quinone oxidoreductase subunit E-like CLH39_06395 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CLH39_06395 IPR042128 NuoE domain CLH39_06395 IPR036249 Thioredoxin-like superfamily CLH39_06400 IPR019554 Soluble ligand binding domain CLH39_06400 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CLH39_06400 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CLH39_06400 IPR011537 NADH ubiquinone oxidoreductase, F subunit CLH39_06400 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CLH39_06400 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CLH39_06400 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CLH39_06405 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CLH39_06405 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal CLH39_06405 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CLH39_06405 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CLH39_06405 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_06405 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_06405 IPR006656 Molybdopterin oxidoreductase CLH39_06405 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CLH39_06410 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CLH39_06410 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CLH39_06415 IPR010226 NADH-quinone oxidoreductase, chain I CLH39_06415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_06415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_06420 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CLH39_06420 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CLH39_06425 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CLH39_06425 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CLH39_06430 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CLH39_06430 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CLH39_06430 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CLH39_06430 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLH39_06435 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal CLH39_06435 IPR003918 NADH:ubiquinone oxidoreductase CLH39_06435 IPR010227 NADH-quinone oxidoreductase, chain M/4 CLH39_06435 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLH39_06440 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLH39_06440 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CLH39_06450 IPR013785 Aldolase-type TIM barrel CLH39_06450 IPR004136 Nitronate monooxygenase CLH39_06455 IPR036412 HAD-like superfamily CLH39_06455 IPR023214 HAD superfamily CLH39_06460 IPR036101 CarD-like/TRCF domain superfamily CLH39_06460 IPR041471 UvrB, interaction domain CLH39_06460 IPR037235 TRCF-like, C-terminal domain CLH39_06460 IPR005118 Transcription-repair-coupling factor, C-terminal domain CLH39_06460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06460 IPR011545 DEAD/DEAH box helicase domain CLH39_06460 IPR003711 CarD-like/TRCF domain CLH39_06460 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_06460 IPR001650 Helicase, C-terminal CLH39_06460 IPR004576 Transcription-repair coupling factor CLH39_06465 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_06465 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CLH39_06465 IPR034683 Cytidylyltransferase IspD/TarI CLH39_06465 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLH39_06470 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CLH39_06470 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CLH39_06470 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CLH39_06475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_06475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_06475 IPR003660 HAMP domain CLH39_06475 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_06475 IPR005467 Histidine kinase domain CLH39_06475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_06475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_06480 IPR011006 CheY-like superfamily CLH39_06480 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_06480 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_06480 IPR001789 Signal transduction response regulator, receiver domain CLH39_06480 IPR039420 Transcriptional regulatory protein WalR-like CLH39_06480 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_06485 IPR000905 Gcp-like domain CLH39_06485 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CLH39_06490 IPR036895 Uracil-DNA glycosylase-like domain superfamily CLH39_06490 IPR005122 Uracil-DNA glycosylase-like CLH39_06490 IPR005273 Uracil-DNA glycosylase family 4 CLH39_06495 IPR036259 MFS transporter superfamily CLH39_06495 IPR023727 Lysophospholipid transporter LplT CLH39_06495 IPR011701 Major facilitator superfamily CLH39_06500 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CLH39_06500 IPR036277 SMCs flexible hinge superfamily CLH39_06500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06500 IPR024704 Structural maintenance of chromosomes protein CLH39_06500 IPR003395 RecF/RecN/SMC, N-terminal CLH39_06500 IPR010935 SMCs flexible hinge CLH39_06510 IPR041663 DisA/LigA, helix-hairpin-helix motif CLH39_06510 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CLH39_06510 IPR018239 NAD-dependent DNA ligase, active site CLH39_06510 IPR013840 NAD-dependent DNA ligase, N-terminal CLH39_06510 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLH39_06510 IPR010994 RuvA domain 2-like CLH39_06510 IPR004150 NAD-dependent DNA ligase, OB-fold CLH39_06510 IPR012340 Nucleic acid-binding, OB-fold CLH39_06510 IPR036420 BRCT domain superfamily CLH39_06510 IPR001357 BRCT domain CLH39_06510 IPR001679 NAD-dependent DNA ligase CLH39_06510 IPR013839 NAD-dependent DNA ligase, adenylation CLH39_06510 IPR033136 NAD-dependent DNA ligase, conserved site CLH39_06515 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLH39_06515 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLH39_06525 IPR006008 Intracellular septation protein A CLH39_06530 IPR028427 Peptide methionine sulfoxide reductase CLH39_06530 IPR002579 Peptide methionine sulphoxide reductase MrsB CLH39_06530 IPR011057 Mss4-like superfamily CLH39_06545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06545 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_06545 IPR003593 AAA+ ATPase domain CLH39_06545 IPR017871 ABC transporter, conserved site CLH39_06545 IPR003439 ABC transporter-like CLH39_06550 IPR003439 ABC transporter-like CLH39_06550 IPR003593 AAA+ ATPase domain CLH39_06550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06550 IPR017871 ABC transporter, conserved site CLH39_06550 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_06555 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CLH39_06555 IPR005618 Outer membrane protein, OmpW CLH39_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06560 IPR003439 ABC transporter-like CLH39_06560 IPR003593 AAA+ ATPase domain CLH39_06560 IPR017871 ABC transporter, conserved site CLH39_06565 IPR011257 DNA glycosylase CLH39_06565 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLH39_06565 IPR005759 Endonuclease III CLH39_06565 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CLH39_06565 IPR004035 Endonuclease III, iron-sulphur binding site CLH39_06565 IPR003265 HhH-GPD domain CLH39_06565 IPR000445 Helix-hairpin-helix motif CLH39_06565 IPR004036 Endonuclease III-like, conserved site-2 CLH39_06570 IPR007202 4Fe-4S domain CLH39_06570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_06570 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CLH39_06570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_06570 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CLH39_06580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_06580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_06580 IPR022569 Ferredoxin, C-terminal CLH39_06580 IPR000813 7Fe ferredoxin CLH39_06585 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CLH39_06585 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CLH39_06585 IPR007229 Nicotinate phosphoribosyltransferase family CLH39_06585 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CLH39_06585 IPR006406 Nicotinate phosphoribosyltransferase CLH39_06595 IPR003607 HD/PDEase domain CLH39_06595 IPR012675 Beta-grasp domain superfamily CLH39_06595 IPR002912 ACT domain CLH39_06595 IPR033655 RelA, TGS domain CLH39_06595 IPR012676 TGS-like CLH39_06595 IPR004095 TGS CLH39_06595 IPR004811 RelA/SpoT family CLH39_06595 IPR007685 RelA/SpoT CLH39_06600 IPR023026 Tryptophan synthase beta chain/beta chain-like CLH39_06600 IPR006654 Tryptophan synthase, beta chain CLH39_06600 IPR006653 Tryptophan synthase, beta chain, conserved site CLH39_06600 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_06600 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_06605 IPR018204 Tryptophan synthase, alpha chain, active site CLH39_06605 IPR013785 Aldolase-type TIM barrel CLH39_06605 IPR011060 Ribulose-phosphate binding barrel CLH39_06605 IPR002028 Tryptophan synthase, alpha chain CLH39_06610 IPR041010 Acetyl-coA carboxylase zinc finger domain CLH39_06610 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CLH39_06610 IPR029045 ClpP/crotonase-like domain superfamily CLH39_06610 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CLH39_06610 IPR034733 Acetyl-CoA carboxylase CLH39_06615 IPR028878 Ribonuclease E CLH39_06615 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CLH39_06615 IPR012340 Nucleic acid-binding, OB-fold CLH39_06615 IPR022967 RNA-binding domain, S1 CLH39_06615 IPR003029 S1 domain CLH39_06615 IPR004659 Ribonuclease E/G CLH39_06615 IPR021968 Polyribonucleotide phosphorylase C-terminal CLH39_06620 IPR036986 RNA-binding S4 domain superfamily CLH39_06620 IPR002942 RNA-binding S4 domain CLH39_06620 IPR006145 Pseudouridine synthase, RsuA/RluA CLH39_06620 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLH39_06620 IPR006225 Pseudouridine synthase, RluC/RluD CLH39_06620 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_06625 IPR006439 HAD hydrolase, subfamily IA CLH39_06625 IPR036412 HAD-like superfamily CLH39_06625 IPR037512 Phosphoglycolate phosphatase, prokaryotic CLH39_06625 IPR041492 Haloacid dehalogenase-like hydrolase CLH39_06625 IPR023214 HAD superfamily CLH39_06625 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLH39_06625 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CLH39_06630 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLH39_06630 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_06630 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily CLH39_06630 IPR000572 Oxidoreductase, molybdopterin-binding domain CLH39_06630 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP CLH39_06635 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ CLH39_06635 IPR013130 Ferric reductase transmembrane component-like domain CLH39_06640 IPR036366 PGBD superfamily CLH39_06640 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CLH39_06640 IPR036365 PGBD-like superfamily CLH39_06640 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CLH39_06645 IPR014777 Tetrapyrrole methylase, subdomain 1 CLH39_06645 IPR008189 rRNA small subunit methyltransferase I CLH39_06645 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CLH39_06645 IPR014776 Tetrapyrrole methylase, subdomain 2 CLH39_06645 IPR035996 Tetrapyrrole methylase superfamily CLH39_06645 IPR000878 Tetrapyrrole methylase CLH39_06650 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CLH39_06650 IPR029001 Inosine triphosphate pyrophosphatase-like CLH39_06655 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CLH39_06655 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CLH39_06660 IPR011332 Zinc-binding ribosomal protein CLH39_06660 IPR002677 Ribosomal protein L32p CLH39_06665 IPR003664 Fatty acid synthesis PlsX protein CLH39_06665 IPR012281 Phospholipid biosynthesis protein, PlsX-like CLH39_06670 IPR016039 Thiolase-like CLH39_06670 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CLH39_06670 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLH39_06670 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLH39_06675 IPR001227 Acyl transferase domain superfamily CLH39_06675 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLH39_06675 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CLH39_06675 IPR024925 Malonyl CoA-acyl carrier protein transacylase CLH39_06675 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLH39_06675 IPR014043 Acyl transferase CLH39_06680 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_06680 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_06680 IPR036291 NAD(P)-binding domain superfamily CLH39_06680 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_06685 IPR036736 ACP-like superfamily CLH39_06685 IPR009081 Phosphopantetheine binding ACP domain CLH39_06685 IPR003231 Acyl carrier protein (ACP) CLH39_06685 IPR006162 Phosphopantetheine attachment site CLH39_06690 IPR000794 Beta-ketoacyl synthase CLH39_06690 IPR014031 Beta-ketoacyl synthase, C-terminal CLH39_06690 IPR018201 Beta-ketoacyl synthase, active site CLH39_06690 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLH39_06690 IPR016039 Thiolase-like CLH39_06690 IPR014030 Beta-ketoacyl synthase, N-terminal CLH39_06690 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CLH39_06700 IPR013325 RNA polymerase sigma factor, region 2 CLH39_06700 IPR007627 RNA polymerase sigma-70 region 2 CLH39_06700 IPR014286 RNA polymerase sigma-70 RpoE type CLH39_06700 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_06700 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_06700 IPR039425 RNA polymerase sigma-70 like CLH39_06700 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_06700 IPR014284 RNA polymerase sigma-70 like domain CLH39_06700 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLH39_06715 IPR011782 Peptidase S1C, Do CLH39_06715 IPR001478 PDZ domain CLH39_06715 IPR001940 Peptidase S1C CLH39_06715 IPR009003 Peptidase S1, PA clan CLH39_06715 IPR036034 PDZ superfamily CLH39_06720 IPR038363 LepA, C-terminal domain superfamily CLH39_06720 IPR031157 Tr-type G domain, conserved site CLH39_06720 IPR000640 Elongation factor EFG, domain V-like CLH39_06720 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_06720 IPR013842 GTP-binding protein LepA, C-terminal CLH39_06720 IPR035654 Elongation factor 4, domain IV CLH39_06720 IPR005225 Small GTP-binding protein domain CLH39_06720 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_06720 IPR035647 EF-G domain III/V-like CLH39_06720 IPR000795 Transcription factor, GTP-binding domain CLH39_06720 IPR006297 Elongation factor 4 CLH39_06720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06725 IPR019758 Peptidase S26A, signal peptidase I, conserved site CLH39_06725 IPR000223 Peptidase S26A, signal peptidase I CLH39_06725 IPR036286 LexA/Signal peptidase-like superfamily CLH39_06725 IPR019533 Peptidase S26 CLH39_06725 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CLH39_06725 IPR019756 Peptidase S26A, signal peptidase I, serine active site CLH39_06730 IPR036389 Ribonuclease III, endonuclease domain superfamily CLH39_06730 IPR011907 Ribonuclease III CLH39_06730 IPR000999 Ribonuclease III domain CLH39_06730 IPR014720 Double-stranded RNA-binding domain CLH39_06735 IPR004044 K Homology domain, type 2 CLH39_06735 IPR030388 Era-type guanine nucleotide-binding (G) domain CLH39_06735 IPR005662 GTP-binding protein Era CLH39_06735 IPR006073 GTP binding domain CLH39_06735 IPR015946 K homology domain-like, alpha/beta CLH39_06735 IPR009019 K homology domain superfamily, prokaryotic type CLH39_06735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06735 IPR005225 Small GTP-binding protein domain CLH39_06740 IPR003717 Recombination protein O, RecO CLH39_06740 IPR012340 Nucleic acid-binding, OB-fold CLH39_06740 IPR022572 DNA replication/recombination mediator RecO, N-terminal CLH39_06740 IPR037278 ARFGAP/RecO-like zinc finger CLH39_06750 IPR004626 RarD protein CLH39_06755 IPR011004 Trimeric LpxA-like superfamily CLH39_06755 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CLH39_06755 IPR001451 Hexapeptide repeat CLH39_06760 IPR006214 Bax inhibitor 1-related CLH39_06770 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CLH39_06770 IPR023042 Peptidase M17, leucine aminopeptidase CLH39_06770 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CLH39_06770 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CLH39_06780 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_06780 IPR000847 Transcription regulator HTH, LysR CLH39_06780 IPR036390 Winged helix DNA-binding domain superfamily CLH39_06780 IPR005119 LysR, substrate-binding CLH39_06785 IPR010061 Methylmalonate-semialdehyde dehydrogenase CLH39_06785 IPR015590 Aldehyde dehydrogenase domain CLH39_06785 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_06785 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_06785 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_06785 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_06790 IPR000847 Transcription regulator HTH, LysR CLH39_06790 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CLH39_06790 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_06790 IPR036390 Winged helix DNA-binding domain superfamily CLH39_06790 IPR005119 LysR, substrate-binding CLH39_06800 IPR000064 Endopeptidase, NLPC/P60 domain CLH39_06800 IPR038765 Papain-like cysteine peptidase superfamily CLH39_06810 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_06810 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CLH39_06810 IPR042099 AMP-dependent synthetase-like superfamily CLH39_06810 IPR000873 AMP-dependent synthetase/ligase CLH39_06810 IPR011904 Acetate-CoA ligase CLH39_06810 IPR020845 AMP-binding, conserved site CLH39_06815 IPR000620 EamA domain CLH39_06820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_06820 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase CLH39_06820 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_06830 IPR037171 NagB/RpiA transferase-like CLH39_06830 IPR004165 Coenzyme A transferase family I CLH39_06830 IPR004163 Coenzyme A transferase binding site CLH39_06830 IPR012792 3-oxoacid CoA-transferase, subunit A CLH39_06835 IPR037171 NagB/RpiA transferase-like CLH39_06835 IPR004164 Coenzyme A transferase active site CLH39_06835 IPR004165 Coenzyme A transferase family I CLH39_06835 IPR012791 3-oxoacid CoA-transferase, subunit B CLH39_06840 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CLH39_06840 IPR000587 Creatinase, N-terminal CLH39_06840 IPR036005 Creatinase/aminopeptidase-like CLH39_06840 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLH39_06840 IPR000994 Peptidase M24 CLH39_06845 IPR033828 CTP synthase GATase domain CLH39_06845 IPR017926 Glutamine amidotransferase CLH39_06845 IPR017456 CTP synthase, N-terminal CLH39_06845 IPR004468 CTP synthase CLH39_06845 IPR029062 Class I glutamine amidotransferase-like CLH39_06845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06850 IPR037523 Vicinal oxygen chelate (VOC) domain CLH39_06850 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLH39_06850 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLH39_06855 IPR006269 3-deoxy-8-phosphooctulonate synthase CLH39_06855 IPR006218 DAHP synthetase I/KDSA CLH39_06855 IPR013785 Aldolase-type TIM barrel CLH39_06870 IPR036259 MFS transporter superfamily CLH39_06870 IPR020846 Major facilitator superfamily domain CLH39_06870 IPR011701 Major facilitator superfamily CLH39_06870 IPR004638 Drug resistance transporter EmrB-like CLH39_06880 IPR000941 Enolase CLH39_06880 IPR029017 Enolase-like, N-terminal CLH39_06880 IPR020810 Enolase, C-terminal TIM barrel domain CLH39_06880 IPR020809 Enolase, conserved site CLH39_06880 IPR020811 Enolase, N-terminal CLH39_06880 IPR036849 Enolase-like, C-terminal domain superfamily CLH39_06885 IPR007060 Septum formation initiator FtsL/DivIC CLH39_06885 IPR023081 Cell division protein FtsB CLH39_06895 IPR000397 Heat shock protein Hsp33 CLH39_06895 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CLH39_06895 IPR016154 Heat shock protein Hsp33, C-terminal CLH39_06895 IPR016153 Heat shock protein Hsp33, N-terminal CLH39_06910 IPR005265 Protoporphyrinogen oxidase HemJ-like CLH39_06915 IPR000965 GPR domain CLH39_06915 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_06915 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_06915 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_06915 IPR015590 Aldehyde dehydrogenase domain CLH39_06915 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CLH39_06915 IPR012134 Glutamate-5-semialdehyde dehydrogenase CLH39_06920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06920 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLH39_06920 IPR010372 DNA polymerase III delta, N-terminal CLH39_06920 IPR005790 DNA polymerase III, delta subunit CLH39_06920 IPR032780 DNA polymerase III subunit delta, C-terminal CLH39_06930 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_06930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_06930 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLH39_06930 IPR025709 Leucyl-tRNA synthetase, editing domain CLH39_06930 IPR015413 Methionyl/Leucyl tRNA synthetase CLH39_06930 IPR002302 Leucine-tRNA ligase CLH39_06930 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLH39_06930 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLH39_06930 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLH39_06935 IPR001705 Ribosomal protein L33 CLH39_06935 IPR038584 Ribosomal protein L33 superfamily CLH39_06935 IPR011332 Zinc-binding ribosomal protein CLH39_06940 IPR001383 Ribosomal protein L28 CLH39_06940 IPR034704 L28p-like CLH39_06940 IPR026569 Ribosomal protein L28/L24 CLH39_06940 IPR037147 Ribosomal protein L28/L24 superfamily CLH39_06945 IPR004734 Multidrug resistance protein CLH39_06945 IPR036259 MFS transporter superfamily CLH39_06945 IPR020846 Major facilitator superfamily domain CLH39_06945 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLH39_06945 IPR011701 Major facilitator superfamily CLH39_06950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_06950 IPR003333 Mycolic acid cyclopropane synthase CLH39_06960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_06960 IPR035906 MetI-like superfamily CLH39_06965 IPR000644 CBS domain CLH39_06965 IPR005892 Glycine betaine transport ATP-binding subunit CLH39_06965 IPR017871 ABC transporter, conserved site CLH39_06965 IPR003439 ABC transporter-like CLH39_06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_06965 IPR003593 AAA+ ATPase domain CLH39_06970 IPR002528 Multi antimicrobial extrusion protein CLH39_06980 IPR042105 Ribosomal protein L31 superfamily CLH39_06980 IPR027493 Ribosomal protein L31 type B CLH39_06980 IPR002150 Ribosomal protein L31 CLH39_06980 IPR034704 L28p-like CLH39_06985 IPR036259 MFS transporter superfamily CLH39_06985 IPR020846 Major facilitator superfamily domain CLH39_06985 IPR011701 Major facilitator superfamily CLH39_06995 IPR036259 MFS transporter superfamily CLH39_06995 IPR005829 Sugar transporter, conserved site CLH39_06995 IPR020846 Major facilitator superfamily domain CLH39_06995 IPR005828 Major facilitator, sugar transporter-like CLH39_07000 IPR009057 Homeobox-like domain superfamily CLH39_07000 IPR000281 Helix-turn-helix protein RpiR CLH39_07000 IPR035472 RpiR-like, SIS domain CLH39_07000 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07000 IPR001347 Sugar isomerase (SIS) CLH39_07005 IPR037518 MPN domain CLH39_07005 IPR010994 RuvA domain 2-like CLH39_07005 IPR001405 Uncharacterised protein family UPF0758 CLH39_07005 IPR025657 RadC-like JAB domain CLH39_07010 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLH39_07015 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CLH39_07020 IPR036249 Thioredoxin-like superfamily CLH39_07020 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CLH39_07020 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CLH39_07020 IPR005955 Glutathione S-transferases, class Zeta CLH39_07020 IPR004045 Glutathione S-transferase, N-terminal CLH39_07020 IPR040079 Glutathione Transferase family CLH39_07020 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_07020 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_07020 IPR004046 Glutathione S-transferase, C-terminal CLH39_07025 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_07025 IPR036291 NAD(P)-binding domain superfamily CLH39_07025 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLH39_07025 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_07025 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLH39_07025 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLH39_07025 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLH39_07035 IPR036877 SUI1 domain superfamily CLH39_07035 IPR005872 Archaeal/bacterial translation initiation factor SUI1 CLH39_07035 IPR001950 SUI1 domain CLH39_07050 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CLH39_07050 IPR036249 Thioredoxin-like superfamily CLH39_07050 IPR033954 Disulphide bond isomerase, DsbC/G CLH39_07050 IPR012336 Thioredoxin-like fold CLH39_07055 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CLH39_07055 IPR029001 Inosine triphosphate pyrophosphatase-like CLH39_07060 IPR003742 RNA methyltransferase RlmH CLH39_07060 IPR029028 Alpha/beta knot methyltransferases CLH39_07060 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLH39_07065 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CLH39_07070 IPR004821 Cytidyltransferase-like domain CLH39_07070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_07070 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CLH39_07075 IPR001260 Coproporphyrinogen III oxidase, aerobic CLH39_07075 IPR018375 Coproporphyrinogen III oxidase, conserved site CLH39_07075 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily CLH39_07080 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLH39_07080 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CLH39_07080 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CLH39_07080 IPR016185 Pre-ATP-grasp domain superfamily CLH39_07080 IPR011054 Rudiment single hybrid motif CLH39_07080 IPR011761 ATP-grasp fold CLH39_07080 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CLH39_07080 IPR013815 ATP-grasp fold, subdomain 1 CLH39_07080 IPR000115 Phosphoribosylglycinamide synthetase CLH39_07085 IPR029072 YebC-like CLH39_07085 IPR002876 Transcriptional regulator TACO1-like CLH39_07085 IPR017856 Integrase-like, N-terminal CLH39_07085 IPR026564 Transcriptional regulator TACO1-like, domain 3 CLH39_07090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07090 IPR033186 Helicase HerA-like C-terminal CLH39_07095 IPR023514 Glyoxylate/hydroxypyruvate reductase A CLH39_07095 IPR036291 NAD(P)-binding domain superfamily CLH39_07095 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLH39_07095 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLH39_07100 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CLH39_07100 IPR024084 Isopropylmalate dehydrogenase-like domain CLH39_07100 IPR011829 Tartrate dehydrogenase CLH39_07110 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_07110 IPR011032 GroES-like superfamily CLH39_07110 IPR036291 NAD(P)-binding domain superfamily CLH39_07110 IPR020843 Polyketide synthase, enoylreductase domain CLH39_07110 IPR013149 Alcohol dehydrogenase, C-terminal CLH39_07110 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CLH39_07115 IPR000146 Fructose-1,6-bisphosphatase class 1 CLH39_07115 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CLH39_07115 IPR028343 Fructose-1,6-bisphosphatase CLH39_07120 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CLH39_07120 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CLH39_07120 IPR027268 Peptidase M4/M1, CTD superfamily CLH39_07120 IPR012779 Peptidase M1, alanyl aminopeptidase CLH39_07120 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CLH39_07120 IPR042097 Aminopeptidase N-like , N-terminal CLH39_07120 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CLH39_07120 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CLH39_07120 IPR014782 Peptidase M1, membrane alanine aminopeptidase CLH39_07130 IPR027444 Histone-like protein H-NS, C-terminal domain CLH39_07130 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CLH39_07130 IPR001801 Histone-like protein H-NS CLH39_07135 IPR036059 Metalloprotease TldD/PmbA superfamily CLH39_07135 IPR025502 TldD CLH39_07135 IPR035068 Metalloprotease TldD/PmbA, N-terminal CLH39_07135 IPR002510 Metalloprotease TldD/PmbA CLH39_07140 IPR000620 EamA domain CLH39_07145 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07145 IPR023187 Transcriptional regulator MarR-type, conserved site CLH39_07145 IPR000835 MarR-type HTH domain CLH39_07145 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07150 IPR016181 Acyl-CoA N-acyltransferase CLH39_07150 IPR012772 L-2,4-diaminobutyric acid acetyltransferase CLH39_07150 IPR000182 GNAT domain CLH39_07155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_07155 IPR005814 Aminotransferase class-III CLH39_07155 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_07155 IPR012773 Ectoine biosynthetic protein CLH39_07155 IPR004637 2,4-diaminobutyrate 4-transaminase CLH39_07155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_07160 IPR011051 RmlC-like cupin domain superfamily CLH39_07160 IPR014710 RmlC-like jelly roll fold CLH39_07160 IPR010462 Ectoine synthase CLH39_07165 IPR012774 Ectoine dioxygenase CLH39_07165 IPR008775 Phytanoyl-CoA dioxygenase CLH39_07180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07180 IPR003439 ABC transporter-like CLH39_07180 IPR017871 ABC transporter, conserved site CLH39_07180 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_07180 IPR003593 AAA+ ATPase domain CLH39_07180 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein CLH39_07185 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_07185 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD CLH39_07185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_07185 IPR035906 MetI-like superfamily CLH39_07190 IPR035906 MetI-like superfamily CLH39_07190 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_07190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_07190 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC CLH39_07195 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB CLH39_07195 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_07200 IPR025299 CstA, C-terminal domain CLH39_07200 IPR003706 CstA, N-terminal domain CLH39_07205 IPR007423 Selenoprotein, putative CLH39_07210 IPR006219 DHAP synthase, class 1 CLH39_07210 IPR013785 Aldolase-type TIM barrel CLH39_07210 IPR006218 DAHP synthetase I/KDSA CLH39_07215 IPR016166 FAD-binding domain, PCMH-type CLH39_07215 IPR004113 FAD-linked oxidase, C-terminal CLH39_07215 IPR004490 Glycolate oxidase subunit GlcD CLH39_07215 IPR006094 FAD linked oxidase, N-terminal CLH39_07215 IPR016164 FAD-linked oxidase-like, C-terminal CLH39_07215 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLH39_07215 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_07220 IPR023382 Adenine nucleotide alpha hydrolase-like domains CLH39_07220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_07220 IPR004506 tRNA-specific 2-thiouridylase CLH39_07225 IPR002781 Transmembrane protein TauE-like CLH39_07230 IPR013094 Alpha/beta hydrolase fold-3 CLH39_07230 IPR029058 Alpha/Beta hydrolase fold CLH39_07230 IPR033140 Lipase, GDXG, putative serine active site CLH39_07240 IPR034343 Uncharacterized GST-like protein YibF CLH39_07240 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_07240 IPR004046 Glutathione S-transferase, C-terminal CLH39_07240 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_07240 IPR036249 Thioredoxin-like superfamily CLH39_07240 IPR004045 Glutathione S-transferase, N-terminal CLH39_07245 IPR024083 Fumarase/histidase, N-terminal CLH39_07245 IPR020557 Fumarate lyase, conserved site CLH39_07245 IPR000362 Fumarate lyase family CLH39_07245 IPR022761 Fumarate lyase, N-terminal CLH39_07245 IPR013539 Adenylosuccinate lyase PurB, C-terminal CLH39_07245 IPR008948 L-Aspartase-like CLH39_07245 IPR004769 Adenylosuccinate lyase CLH39_07250 IPR002321 Cytochrome c, class II CLH39_07250 IPR010980 Cytochrome c/b562 CLH39_07250 IPR012127 Cytochrome c prime CLH39_07250 IPR015984 Cytochrome c prime, subgroup CLH39_07255 IPR001905 Ammonium transporter CLH39_07255 IPR018047 Ammonium transporter, conserved site CLH39_07255 IPR024041 Ammonium transporter AmtB-like domain CLH39_07255 IPR029020 Ammonium/urea transporter CLH39_07260 IPR002187 Nitrogen regulatory protein PII CLH39_07260 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLH39_07260 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLH39_07260 IPR017918 Nitrogen regulatory protein PII, conserved site CLH39_07260 IPR002332 Nitrogen regulatory protein P-II, urydylation site CLH39_07265 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07265 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07265 IPR000835 MarR-type HTH domain CLH39_07270 IPR042098 Taurine dioxygenase TauD-like superfamily CLH39_07270 IPR003819 TauD/TfdA-like domain CLH39_07275 IPR000849 Sugar phosphate transporter CLH39_07275 IPR011701 Major facilitator superfamily CLH39_07275 IPR020846 Major facilitator superfamily domain CLH39_07275 IPR036259 MFS transporter superfamily CLH39_07280 IPR001707 Chloramphenicol acetyltransferase CLH39_07280 IPR018372 Chloramphenicol acetyltransferase, active site CLH39_07280 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLH39_07290 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CLH39_07295 IPR010232 Probable protein kinase UbiB CLH39_07295 IPR004147 UbiB domain CLH39_07295 IPR011009 Protein kinase-like domain superfamily CLH39_07310 IPR032677 GTP cyclohydrolase II CLH39_07310 IPR000926 GTP cyclohydrolase II, RibA CLH39_07310 IPR036144 RibA-like superfamily CLH39_07315 IPR003680 Flavodoxin-like fold CLH39_07315 IPR023048 NADH-azoreductase, FMN-dependent CLH39_07315 IPR029039 Flavoprotein-like superfamily CLH39_07320 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07320 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07320 IPR005119 LysR, substrate-binding CLH39_07320 IPR000847 Transcription regulator HTH, LysR CLH39_07330 IPR001727 Gdt1 family CLH39_07335 IPR000014 PAS domain CLH39_07335 IPR003660 HAMP domain CLH39_07335 IPR001610 PAC motif CLH39_07335 IPR004090 Chemotaxis methyl-accepting receptor CLH39_07335 IPR013655 PAS fold-3 CLH39_07335 IPR035965 PAS domain superfamily CLH39_07335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_07340 IPR011006 CheY-like superfamily CLH39_07340 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_07340 IPR001789 Signal transduction response regulator, receiver domain CLH39_07340 IPR039420 Transcriptional regulatory protein WalR-like CLH39_07340 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07345 IPR005467 Histidine kinase domain CLH39_07345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_07345 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_07345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_07345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_07345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_07350 IPR001045 Spermidine/spermine synthases CLH39_07350 IPR030374 Polyamine biosynthesis domain CLH39_07350 IPR035246 Spermidine synthase, tetramerisation domain CLH39_07350 IPR037163 Spermidine synthase, tetramerisation domain superfamily CLH39_07350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_07355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_07355 IPR025980 ATP-sulfurylase PUA-like domain CLH39_07355 IPR024951 Sulphate adenylyltransferase catalytic domain CLH39_07355 IPR002650 Sulphate adenylyltransferase CLH39_07355 IPR015947 PUA-like superfamily CLH39_07355 IPR020792 Sulphate adenylyltransferase, prokaryotic-type CLH39_07365 IPR005467 Histidine kinase domain CLH39_07365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_07365 IPR037952 Sensor histidine kinase TorS, sensor domain CLH39_07365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_07365 IPR001789 Signal transduction response regulator, receiver domain CLH39_07365 IPR038188 TorS, sensor domain superfamily CLH39_07365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_07365 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLH39_07365 IPR036641 HPT domain superfamily CLH39_07365 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_07365 IPR011006 CheY-like superfamily CLH39_07365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_07365 IPR003660 HAMP domain CLH39_07370 IPR011006 CheY-like superfamily CLH39_07370 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_07370 IPR001789 Signal transduction response regulator, receiver domain CLH39_07370 IPR000792 Transcription regulator LuxR, C-terminal CLH39_07375 IPR018212 Sodium/solute symporter, conserved site CLH39_07375 IPR001734 Sodium/solute symporter CLH39_07375 IPR038377 Sodium/glucose symporter superfamily CLH39_07375 IPR014083 Cation/acetate symporter ActP CLH39_07395 IPR001123 Amino acid exporter protein, LeuE-type CLH39_07395 IPR004778 Homoserine/Threonine efflux protein CLH39_07400 IPR001991 Sodium:dicarboxylate symporter CLH39_07400 IPR023025 Serine/threonine transporter SstT CLH39_07400 IPR036458 Sodium:dicarboxylate symporter superfamily CLH39_07410 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_07410 IPR004046 Glutathione S-transferase, C-terminal CLH39_07410 IPR004045 Glutathione S-transferase, N-terminal CLH39_07410 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_07410 IPR036249 Thioredoxin-like superfamily CLH39_07435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_07435 IPR000524 Transcription regulator HTH, GntR CLH39_07435 IPR004839 Aminotransferase, class I/classII CLH39_07435 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_07435 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07435 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07440 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07440 IPR000847 Transcription regulator HTH, LysR CLH39_07440 IPR005119 LysR, substrate-binding CLH39_07440 IPR017685 HTH-type transcriptional regulator ArgP CLH39_07440 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07445 IPR001123 Amino acid exporter protein, LeuE-type CLH39_07445 IPR004777 L-lysine exporter/arginine exporter CLH39_07460 IPR003593 AAA+ ATPase domain CLH39_07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07460 IPR017871 ABC transporter, conserved site CLH39_07460 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CLH39_07460 IPR003439 ABC transporter-like CLH39_07460 IPR032781 ABC-transporter extension domain CLH39_07460 IPR032524 ABC transporter Uup, C-terminal CLH39_07470 IPR001647 DNA-binding HTH domain, TetR-type CLH39_07470 IPR009057 Homeobox-like domain superfamily CLH39_07470 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLH39_07475 IPR038743 YjgH-like CLH39_07475 IPR035959 RutC-like superfamily CLH39_07475 IPR006175 YjgF/YER057c/UK114 family CLH39_07480 IPR000847 Transcription regulator HTH, LysR CLH39_07480 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07480 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07480 IPR005119 LysR, substrate-binding CLH39_07485 IPR004839 Aminotransferase, class I/classII CLH39_07485 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_07485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_07485 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_07495 IPR016024 Armadillo-type fold CLH39_07495 IPR014825 DNA alkylation repair enzyme CLH39_07495 IPR021133 HEAT, type 2 CLH39_07500 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLH39_07500 IPR029052 Metallo-dependent phosphatase-like CLH39_07505 IPR010582 Catalase immune-responsive domain CLH39_07505 IPR029062 Class I glutamine amidotransferase-like CLH39_07505 IPR041399 Large catalase, C-terminal domain CLH39_07505 IPR018028 Catalase, mono-functional, haem-containing CLH39_07505 IPR024708 Catalase active site CLH39_07505 IPR020835 Catalase superfamily CLH39_07505 IPR011614 Catalase core domain CLH39_07505 IPR037060 Catalase core domain superfamily CLH39_07505 IPR002226 Catalase haem-binding site CLH39_07505 IPR024712 Catalase, mono-functional, haem-containing, clade 2 CLH39_07520 IPR039426 Vitamin B12 transporter BtuB-like CLH39_07520 IPR012910 TonB-dependent receptor, plug domain CLH39_07520 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_07520 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_07520 IPR010916 TonB box, conserved site CLH39_07520 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_07520 IPR010917 TonB-dependent receptor, conserved site CLH39_07530 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_07530 IPR022569 Ferredoxin, C-terminal CLH39_07530 IPR000813 7Fe ferredoxin CLH39_07530 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_07535 IPR011701 Major facilitator superfamily CLH39_07535 IPR036259 MFS transporter superfamily CLH39_07535 IPR020846 Major facilitator superfamily domain CLH39_07540 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07540 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07540 IPR000847 Transcription regulator HTH, LysR CLH39_07540 IPR005119 LysR, substrate-binding CLH39_07545 IPR023214 HAD superfamily CLH39_07545 IPR041492 Haloacid dehalogenase-like hydrolase CLH39_07545 IPR036412 HAD-like superfamily CLH39_07545 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CLH39_07545 IPR037512 Phosphoglycolate phosphatase, prokaryotic CLH39_07545 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLH39_07545 IPR006439 HAD hydrolase, subfamily IA CLH39_07550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_07550 IPR010233 Ubiquinone biosynthesis O-methyltransferase CLH39_07555 IPR006664 Outer membrane protein, bacterial CLH39_07555 IPR006665 OmpA-like domain CLH39_07555 IPR036737 OmpA-like domain superfamily CLH39_07555 IPR006690 Outer membrane protein, OmpA-like, conserved site CLH39_07560 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CLH39_07560 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLH39_07560 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLH39_07560 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLH39_07560 IPR005743 DNA gyrase, subunit A CLH39_07560 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CLH39_07560 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLH39_07565 IPR000192 Aminotransferase class V domain CLH39_07565 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_07565 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_07565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_07565 IPR022278 Phosphoserine aminotransferase CLH39_07570 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CLH39_07570 IPR001086 Prephenate dehydratase CLH39_07570 IPR036263 Chorismate mutase type II superfamily CLH39_07570 IPR036979 Chorismate mutase domain superfamily CLH39_07570 IPR002701 Chorismate mutase II, prokaryotic-type CLH39_07570 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain CLH39_07570 IPR002912 ACT domain CLH39_07570 IPR018528 Prephenate dehydratase, conserved site CLH39_07575 IPR003099 Prephenate dehydrogenase CLH39_07575 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_07575 IPR002912 ACT domain CLH39_07575 IPR036291 NAD(P)-binding domain superfamily CLH39_07580 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CLH39_07580 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLH39_07580 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CLH39_07580 IPR001986 Enolpyruvate transferase domain CLH39_07580 IPR036968 Enolpyruvate transferase domain superfamily CLH39_07585 IPR011994 Cytidylate kinase domain CLH39_07585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07585 IPR003136 Cytidylate kinase CLH39_07590 IPR000110 Ribosomal protein S1 CLH39_07590 IPR022967 RNA-binding domain, S1 CLH39_07590 IPR003029 S1 domain CLH39_07590 IPR012340 Nucleic acid-binding, OB-fold CLH39_07595 IPR000119 Histone-like DNA-binding protein CLH39_07595 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CLH39_07595 IPR005685 Integration host factor, beta subunit CLH39_07605 IPR041166 LapB, rubredoxin metal binding domain CLH39_07605 IPR013026 Tetratricopeptide repeat-containing domain CLH39_07605 IPR011990 Tetratricopeptide-like helical domain superfamily CLH39_07605 IPR019734 Tetratricopeptide repeat CLH39_07605 IPR030865 Lipopolysaccharide assembly protein B CLH39_07610 IPR029056 Ribokinase-like CLH39_07610 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLH39_07610 IPR011611 Carbohydrate kinase PfkB CLH39_07610 IPR011913 RfaE bifunctional protein, domain I CLH39_07615 IPR001509 NAD-dependent epimerase/dehydratase CLH39_07615 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CLH39_07615 IPR036291 NAD(P)-binding domain superfamily CLH39_07620 IPR004805 DNA polymerase III, alpha subunit CLH39_07620 IPR040982 DNA polymerase III alpha subunit finger domain CLH39_07620 IPR029460 DNA polymerase, helix-hairpin-helix motif CLH39_07620 IPR004013 PHP domain CLH39_07620 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLH39_07620 IPR016195 Polymerase/histidinol phosphatase-like CLH39_07620 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CLH39_07620 IPR010994 RuvA domain 2-like CLH39_07620 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CLH39_07625 IPR005856 Cysteine synthase CLH39_07625 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_07625 IPR005858 Cysteine synthase CysM CLH39_07625 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CLH39_07625 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_07630 IPR011757 Lytic transglycosylase MltB CLH39_07630 IPR031304 Transglycosylase SLT domain 2 CLH39_07630 IPR023346 Lysozyme-like domain superfamily CLH39_07635 IPR000286 Histone deacetylase family CLH39_07635 IPR023801 Histone deacetylase domain CLH39_07635 IPR037138 Histone deacetylase domain superfamily CLH39_07635 IPR023696 Ureohydrolase domain superfamily CLH39_07640 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CLH39_07640 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLH39_07640 IPR012255 Electron transfer flavoprotein, beta subunit CLH39_07640 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CLH39_07640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_07645 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CLH39_07645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_07645 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CLH39_07645 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLH39_07645 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLH39_07645 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLH39_07645 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CLH39_07650 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_07650 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_07650 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_07650 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_07650 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CLH39_07650 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_07650 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_07655 IPR036249 Thioredoxin-like superfamily CLH39_07655 IPR024706 Peroxiredoxin, AhpC-type CLH39_07655 IPR019479 Peroxiredoxin, C-terminal CLH39_07655 IPR022915 Peroxiredoxin, TDXH subfamily CLH39_07655 IPR013766 Thioredoxin domain CLH39_07655 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLH39_07665 IPR004562 Lipoyltransferase/lipoate-protein ligase CLH39_07665 IPR019491 Lipoate protein ligase, C-terminal CLH39_07665 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CLH39_07675 IPR008991 Translation protein SH3-like domain superfamily CLH39_07675 IPR018257 Ribosomal protein L19, conserved site CLH39_07675 IPR001857 Ribosomal protein L19 CLH39_07675 IPR038657 Ribosomal protein L19 superfamily CLH39_07685 IPR010914 RsgA GTPase domain CLH39_07685 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CLH39_07685 IPR012340 Nucleic acid-binding, OB-fold CLH39_07685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07685 IPR004881 Ribosome biogenesis GTPase RsgA CLH39_07685 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CLH39_07690 IPR001915 Peptidase M48 CLH39_07690 IPR032456 CAAX prenyl protease 1, N-terminal CLH39_07690 IPR027057 CAAX prenyl protease 1 CLH39_07695 IPR012337 Ribonuclease H-like superfamily CLH39_07695 IPR036397 Ribonuclease H superfamily CLH39_07695 IPR022894 Oligoribonuclease CLH39_07695 IPR013520 Exonuclease, RNase T/DNA polymerase III CLH39_07700 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A CLH39_07700 IPR012347 Ferritin-like CLH39_07700 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CLH39_07700 IPR009078 Ferritin-like superfamily CLH39_07705 IPR009359 Phenylacetic acid degradation B CLH39_07705 IPR038693 Phenylacetyl-CoA epoxidase, subunit B CLH39_07710 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C CLH39_07710 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CLH39_07710 IPR009078 Ferritin-like superfamily CLH39_07710 IPR012347 Ferritin-like CLH39_07715 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CLH39_07715 IPR034904 Fe-S cluster assembly domain superfamily CLH39_07715 IPR002744 MIP18 family-like CLH39_07720 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_07720 IPR017938 Riboflavin synthase-like beta-barrel CLH39_07720 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_07720 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_07720 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLH39_07720 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_07720 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_07720 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_07720 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit CLH39_07720 IPR012675 Beta-grasp domain superfamily CLH39_07720 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_07725 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_07725 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_07725 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_07725 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_07725 IPR015590 Aldehyde dehydrogenase domain CLH39_07725 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CLH39_07725 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_07730 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CLH39_07730 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_07730 IPR014748 Enoyl-CoA hydratase, C-terminal CLH39_07730 IPR029045 ClpP/crotonase-like domain superfamily CLH39_07735 IPR003736 Phenylacetic acid degradation-related domain CLH39_07735 IPR006683 Thioesterase domain CLH39_07735 IPR011973 Phenylacetic acid degradation protein PaaD CLH39_07735 IPR029069 HotDog domain superfamily CLH39_07740 IPR011880 Phenylacetate-CoA ligase CLH39_07740 IPR042099 AMP-dependent synthetase-like superfamily CLH39_07740 IPR000873 AMP-dependent synthetase/ligase CLH39_07740 IPR028154 AMP-dependent ligase, C-terminal CLH39_07745 IPR008278 4'-phosphopantetheinyl transferase domain CLH39_07745 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CLH39_07745 IPR002582 Holo-[acyl carrier protein] synthase CLH39_07745 IPR004568 Phosphopantetheine-protein transferase domain CLH39_07750 IPR017853 Glycoside hydrolase superfamily CLH39_07750 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CLH39_07750 IPR001764 Glycoside hydrolase, family 3, N-terminal CLH39_07750 IPR022956 Beta-hexosaminidase, bacterial CLH39_07750 IPR019800 Glycoside hydrolase, family 3, active site CLH39_07755 IPR010994 RuvA domain 2-like CLH39_07755 IPR035901 GIY-YIG endonuclease superfamily CLH39_07755 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLH39_07755 IPR000305 GIY-YIG endonuclease CLH39_07755 IPR004791 UvrABC system, subunit C CLH39_07755 IPR036876 UVR domain superfamily CLH39_07755 IPR001162 UvrC family homology region CLH39_07755 IPR001943 UVR domain CLH39_07755 IPR038476 UvrC homology region 2 superfamily CLH39_07760 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CLH39_07760 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CLH39_07760 IPR000462 CDP-alcohol phosphatidyltransferase CLH39_07770 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CLH39_07770 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CLH39_07770 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CLH39_07775 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_07775 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CLH39_07775 IPR006254 Isocitrate lyase CLH39_07775 IPR039556 ICL/PEPM domain CLH39_07775 IPR040442 Pyruvate kinase-like domain superfamily CLH39_07780 IPR027256 P-type ATPase, subfamily IB CLH39_07780 IPR036163 Heavy metal-associated domain superfamily CLH39_07780 IPR006121 Heavy metal-associated domain, HMA CLH39_07780 IPR023299 P-type ATPase, cytoplasmic domain N CLH39_07780 IPR001757 P-type ATPase CLH39_07780 IPR018303 P-type ATPase, phosphorylation site CLH39_07780 IPR023298 P-type ATPase, transmembrane domain superfamily CLH39_07780 IPR036412 HAD-like superfamily CLH39_07780 IPR006122 Heavy metal-associated domain, copper ion-binding CLH39_07780 IPR017969 Heavy-metal-associated, conserved site CLH39_07780 IPR023214 HAD superfamily CLH39_07780 IPR008250 P-type ATPase, A domain superfamily CLH39_07790 IPR000883 Cytochrome c oxidase subunit I CLH39_07790 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLH39_07790 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CLH39_07790 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLH39_07790 IPR023616 Cytochrome c oxidase-like, subunit I domain CLH39_07805 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CLH39_07805 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CLH39_07805 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily CLH39_07805 IPR009056 Cytochrome c-like domain CLH39_07805 IPR008168 Cytochrome c, class IC CLH39_07805 IPR036909 Cytochrome c-like domain superfamily CLH39_07810 IPR013783 Immunoglobulin-like fold CLH39_07810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_07810 IPR032879 FixG, C-terminal immunoglobulin-like domain CLH39_07810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_07810 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG CLH39_07825 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07825 IPR012318 Crp-type HTH domain CLH39_07825 IPR000595 Cyclic nucleotide-binding domain CLH39_07825 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07825 IPR018490 Cyclic nucleotide-binding-like CLH39_07825 IPR018335 Transcription regulator HTH, Crp-type, conserved site CLH39_07825 IPR014710 RmlC-like jelly roll fold CLH39_07830 IPR041546 ClpA/ClpB, AAA lid domain CLH39_07830 IPR028299 ClpA/B, conserved site 2 CLH39_07830 IPR003959 ATPase, AAA-type, core CLH39_07830 IPR017730 Chaperonin ClpB CLH39_07830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07830 IPR003593 AAA+ ATPase domain CLH39_07830 IPR036628 Clp, N-terminal domain superfamily CLH39_07830 IPR004176 Clp, N-terminal CLH39_07830 IPR001270 ClpA/B family CLH39_07830 IPR019489 Clp ATPase, C-terminal CLH39_07830 IPR018368 ClpA/B, conserved site 1 CLH39_07835 IPR003828 Epoxyqueuosine reductase QueH CLH39_07840 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CLH39_07840 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CLH39_07840 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CLH39_07850 IPR012338 Beta-lactamase/transpeptidase-like CLH39_07850 IPR000871 Beta-lactamase, class-A CLH39_07850 IPR023650 Beta-lactamase, class-A active site CLH39_07855 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_07855 IPR036390 Winged helix DNA-binding domain superfamily CLH39_07855 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_07855 IPR000524 Transcription regulator HTH, GntR CLH39_07855 IPR011711 GntR, C-terminal CLH39_07865 IPR039424 Solute-binding protein family 5 CLH39_07865 IPR023765 Solute-binding protein family 5, conserved site CLH39_07865 IPR000914 Solute-binding protein family 5 domain CLH39_07865 IPR030678 Peptide/nickel binding protein, MppA-type CLH39_07870 IPR035906 MetI-like superfamily CLH39_07870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_07875 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLH39_07875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_07875 IPR035906 MetI-like superfamily CLH39_07880 IPR017871 ABC transporter, conserved site CLH39_07880 IPR003593 AAA+ ATPase domain CLH39_07880 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLH39_07880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07880 IPR003439 ABC transporter-like CLH39_07885 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_07885 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_07885 IPR017638 Anthranilate 1,2-dioxygenase, large subunit CLH39_07885 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_07885 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CLH39_07885 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CLH39_07890 IPR000391 Ring-hydroxylating dioxygenase beta subunit CLH39_07890 IPR032710 NTF2-like domain superfamily CLH39_07900 IPR036291 NAD(P)-binding domain superfamily CLH39_07900 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CLH39_07900 IPR033524 Leu/Phe/Val dehydrogenases active site CLH39_07900 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CLH39_07900 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CLH39_07900 IPR014362 Glutamate dehydrogenase CLH39_07900 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CLH39_07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_07905 IPR003593 AAA+ ATPase domain CLH39_07905 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLH39_07905 IPR011129 Cold shock domain CLH39_07905 IPR041703 Transcription termination factor Rho, ATP binding domain CLH39_07905 IPR004665 Transcription termination factor Rho CLH39_07905 IPR011112 Rho termination factor, N-terminal CLH39_07905 IPR036269 Rho termination factor, N-terminal domain superfamily CLH39_07905 IPR011113 Rho termination factor, RNA-binding domain CLH39_07905 IPR012340 Nucleic acid-binding, OB-fold CLH39_07910 IPR036249 Thioredoxin-like superfamily CLH39_07910 IPR017937 Thioredoxin, conserved site CLH39_07910 IPR013766 Thioredoxin domain CLH39_07910 IPR005746 Thioredoxin CLH39_07915 IPR001241 DNA topoisomerase, type IIA CLH39_07915 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CLH39_07915 IPR002288 DNA gyrase B subunit, C-terminal CLH39_07915 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_07915 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_07915 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_07915 IPR006171 TOPRIM domain CLH39_07915 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_07915 IPR018522 DNA topoisomerase, type IIA, conserved site CLH39_07915 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CLH39_07915 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLH39_07915 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLH39_07920 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLH39_07920 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLH39_07920 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CLH39_07920 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CLH39_07920 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CLH39_07920 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CLH39_07925 IPR012675 Beta-grasp domain superfamily CLH39_07925 IPR017938 Riboflavin synthase-like beta-barrel CLH39_07925 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_07925 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_07925 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_07925 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_07925 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_07925 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_07925 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_07930 IPR023080 D-amino acid dehydrogenase DadA CLH39_07930 IPR006076 FAD dependent oxidoreductase CLH39_07930 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_07935 IPR006061 Solute-binding family 1, conserved site CLH39_07935 IPR006059 Bacterial extracellular solute-binding protein CLH39_07965 IPR014306 Hydroxyisourate hydrolase CLH39_07965 IPR023419 Transthyretin, conserved site CLH39_07965 IPR023416 Transthyretin/hydroxyisourate hydrolase domain CLH39_07965 IPR023418 Transthyretin, thyroxine binding site CLH39_07965 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily CLH39_07980 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CLH39_07980 IPR003156 DHHA1 domain CLH39_07980 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CLH39_07980 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CLH39_07980 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_07980 IPR002318 Alanine-tRNA ligase, class IIc CLH39_07980 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CLH39_07980 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CLH39_07980 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLH39_07985 IPR036868 TusA-like domain superfamily CLH39_07985 IPR001455 TusA-like domain CLH39_07990 IPR023803 Ribosomal protein S16 domain superfamily CLH39_07990 IPR000307 Ribosomal protein S16 CLH39_07995 IPR036976 RimM, N-terminal domain superfamily CLH39_07995 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_07995 IPR011961 16S rRNA processing protein RimM CLH39_07995 IPR002676 RimM, N-terminal CLH39_07995 IPR011033 PRC-barrel-like superfamily CLH39_08000 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CLH39_08000 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CLH39_08000 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLH39_08000 IPR029028 Alpha/beta knot methyltransferases CLH39_08000 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CLH39_08005 IPR000620 EamA domain CLH39_08010 IPR005119 LysR, substrate-binding CLH39_08010 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08010 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08010 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CLH39_08010 IPR000847 Transcription regulator HTH, LysR CLH39_08015 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CLH39_08015 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLH39_08015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_08015 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLH39_08015 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLH39_08015 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CLH39_08015 IPR002303 Valine-tRNA ligase CLH39_08015 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CLH39_08015 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_08015 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLH39_08015 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CLH39_08020 IPR001564 Nucleoside diphosphate kinase CLH39_08020 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CLH39_08020 IPR023005 Nucleoside diphosphate kinase, active site CLH39_08020 IPR034907 Nucleoside diphosphate kinase-like domain CLH39_08025 IPR027492 Dual-specificity RNA methyltransferase RlmN CLH39_08025 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CLH39_08025 IPR040072 Methyltransferase (Class A) CLH39_08025 IPR013785 Aldolase-type TIM barrel CLH39_08025 IPR007197 Radical SAM CLH39_08035 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CLH39_08035 IPR011005 Dihydropteroate synthase-like CLH39_08035 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CLH39_08040 IPR033656 Histidyl-anticodon-binding CLH39_08040 IPR006195 Aminoacyl-tRNA synthetase, class II CLH39_08040 IPR015807 Histidine-tRNA ligase CLH39_08040 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CLH39_08040 IPR036621 Anticodon-binding domain superfamily CLH39_08040 IPR004154 Anticodon-binding CLH39_08040 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CLH39_08045 IPR018704 Tetratricopeptide repeat-like domain CLH39_08045 IPR026039 Uncharacterised protein family UPF0070 CLH39_08045 IPR011990 Tetratricopeptide-like helical domain superfamily CLH39_08050 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CLH39_08050 IPR017687 Outer membrane protein assembly factor BamB CLH39_08050 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CLH39_08050 IPR002372 Pyrrolo-quinoline quinone repeat CLH39_08050 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLH39_08055 IPR003593 AAA+ ATPase domain CLH39_08055 IPR031166 EngA-type guanine nucleotide-binding (G) domain CLH39_08055 IPR016484 GTP-binding protein EngA CLH39_08055 IPR005225 Small GTP-binding protein domain CLH39_08055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_08055 IPR015946 K homology domain-like, alpha/beta CLH39_08055 IPR032859 GTPase Der, C-terminal KH-domain-like CLH39_08055 IPR006073 GTP binding domain CLH39_08060 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CLH39_08060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_08060 IPR005861 Histidinol-phosphate aminotransferase family CLH39_08060 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_08060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_08060 IPR004839 Aminotransferase, class I/classII CLH39_08065 IPR010920 LSM domain superfamily CLH39_08065 IPR005001 RNA-binding protein Hfq CLH39_08070 IPR035647 EF-G domain III/V-like CLH39_08070 IPR030394 HflX-type guanine nucleotide-binding (G) domain CLH39_08070 IPR032305 GTP-binding protein, middle domain CLH39_08070 IPR006073 GTP binding domain CLH39_08070 IPR016496 GTPase HflX CLH39_08070 IPR025121 GTPase HflX, N-terminal CLH39_08070 IPR042108 GTPase HflX, N-terminal domain superfamily CLH39_08070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_08075 IPR001972 Stomatin family CLH39_08075 IPR036013 Band 7/SPFH domain superfamily CLH39_08075 IPR001107 Band 7 domain CLH39_08075 IPR010201 HflK CLH39_08075 IPR020980 Menbrane protein HflK, N-terminal CLH39_08080 IPR036013 Band 7/SPFH domain superfamily CLH39_08080 IPR001107 Band 7 domain CLH39_08080 IPR010200 HflC CLH39_08085 IPR004517 ATP phosphoribosyltransferase regulatory subunit CLH39_08085 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CLH39_08085 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CLH39_08090 IPR042110 Adenylosuccinate synthetase, domain 2 CLH39_08090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_08090 IPR042111 Adenylosuccinate synthetase, domain 3 CLH39_08090 IPR033128 Adenylosuccinate synthase, active site CLH39_08090 IPR018220 Adenylosuccinate synthase, GTP-binding site CLH39_08090 IPR042109 Adenylosuccinate synthetase, domain 1 CLH39_08090 IPR001114 Adenylosuccinate synthetase CLH39_08095 IPR000836 Phosphoribosyltransferase domain CLH39_08095 IPR029057 Phosphoribosyltransferase-like CLH39_08095 IPR023747 Xanthine-guanine phosphoribosyltransferase CLH39_08100 IPR001911 Ribosomal protein S21 CLH39_08100 IPR038380 Ribosomal protein S21 superfamily CLH39_08100 IPR018278 Ribosomal protein S21, conserved site CLH39_08105 IPR002694 Zinc finger, CHC2-type CLH39_08105 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLH39_08105 IPR013264 DNA primase, catalytic core, N-terminal CLH39_08105 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CLH39_08105 IPR019475 DNA primase, DnaB-helicase binding domain CLH39_08105 IPR006295 DNA primase, DnaG CLH39_08105 IPR013173 DNA primase DnaG, DnaB-binding domain CLH39_08105 IPR006171 TOPRIM domain CLH39_08105 IPR036977 DNA Primase, CHC2-type zinc finger CLH39_08105 IPR030846 DNA primase DnaG, bacteria CLH39_08105 IPR034151 Bacterial DnaG primase, TOPRIM domain CLH39_08110 IPR014284 RNA polymerase sigma-70 like domain CLH39_08110 IPR000943 RNA polymerase sigma-70 CLH39_08110 IPR007627 RNA polymerase sigma-70 region 2 CLH39_08110 IPR007624 RNA polymerase sigma-70 region 3 CLH39_08110 IPR007630 RNA polymerase sigma-70 region 4 CLH39_08110 IPR042189 Sigma-70 factor, region 1.1 superfamily CLH39_08110 IPR007127 RNA polymerase sigma factor 70, region 1.1 CLH39_08110 IPR013325 RNA polymerase sigma factor, region 2 CLH39_08110 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08110 IPR028630 RNA polymerase sigma factor RpoD CLH39_08110 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CLH39_08110 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_08110 IPR007631 RNA polymerase sigma factor 70, non-essential domain CLH39_08110 IPR009042 RNA polymerase sigma-70 region 1.2 CLH39_08115 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_08115 IPR005467 Histidine kinase domain CLH39_08115 IPR003660 HAMP domain CLH39_08115 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_08115 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_08115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_08115 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_08120 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08120 IPR039420 Transcriptional regulatory protein WalR-like CLH39_08120 IPR001789 Signal transduction response regulator, receiver domain CLH39_08120 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_08120 IPR011006 CheY-like superfamily CLH39_08125 IPR007269 Isoprenylcysteine carboxyl methyltransferase CLH39_08130 IPR006680 Amidohydrolase-related CLH39_08130 IPR032466 Metal-dependent hydrolase CLH39_08130 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_08130 IPR014311 Guanine deaminase CLH39_08140 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CLH39_08140 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLH39_08140 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLH39_08140 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CLH39_08145 IPR036884 [2Fe-2S]-binding domain superfamily CLH39_08145 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_08145 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_08145 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_08145 IPR002888 [2Fe-2S]-binding CLH39_08145 IPR012675 Beta-grasp domain superfamily CLH39_08150 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08150 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08150 IPR005119 LysR, substrate-binding CLH39_08150 IPR000847 Transcription regulator HTH, LysR CLH39_08155 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLH39_08155 IPR005501 LamB/YcsF/PxpA-like CLH39_08165 IPR004711 Benzoate transporter CLH39_08170 IPR018060 DNA binding HTH domain, AraC-type CLH39_08170 IPR011051 RmlC-like cupin domain superfamily CLH39_08170 IPR018062 HTH domain AraC-type, conserved site CLH39_08170 IPR003313 AraC-type arabinose-binding/dimerisation domain CLH39_08170 IPR014710 RmlC-like jelly roll fold CLH39_08170 IPR009057 Homeobox-like domain superfamily CLH39_08175 IPR036259 MFS transporter superfamily CLH39_08175 IPR020846 Major facilitator superfamily domain CLH39_08175 IPR011701 Major facilitator superfamily CLH39_08175 IPR004747 Cyanate transport system protein CLH39_08180 IPR020846 Major facilitator superfamily domain CLH39_08180 IPR011701 Major facilitator superfamily CLH39_08180 IPR036259 MFS transporter superfamily CLH39_08185 IPR003010 Carbon-nitrogen hydrolase CLH39_08185 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_08185 IPR001110 Uncharacterised protein family UPF0012, conserved site CLH39_08195 IPR011051 RmlC-like cupin domain superfamily CLH39_08195 IPR008778 Pirin, C-terminal domain CLH39_08195 IPR012093 Pirin CLH39_08195 IPR003829 Pirin, N-terminal domain CLH39_08195 IPR014710 RmlC-like jelly roll fold CLH39_08205 IPR004045 Glutathione S-transferase, N-terminal CLH39_08205 IPR040079 Glutathione Transferase family CLH39_08205 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_08205 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_08205 IPR036249 Thioredoxin-like superfamily CLH39_08210 IPR024530 Putative quorum-sensing-regulated virulence factor CLH39_08215 IPR029058 Alpha/Beta hydrolase fold CLH39_08215 IPR002925 Dienelactone hydrolase CLH39_08225 IPR000182 GNAT domain CLH39_08225 IPR016181 Acyl-CoA N-acyltransferase CLH39_08230 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_08230 IPR006076 FAD dependent oxidoreductase CLH39_08235 IPR026045 Ferric binding protein CLH39_08240 IPR006323 Phosphonoacetaldehyde hydrolase CLH39_08240 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLH39_08240 IPR023214 HAD superfamily CLH39_08240 IPR041492 Haloacid dehalogenase-like hydrolase CLH39_08240 IPR006439 HAD hydrolase, subfamily IA CLH39_08240 IPR036412 HAD-like superfamily CLH39_08245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_08245 IPR035906 MetI-like superfamily CLH39_08250 IPR003593 AAA+ ATPase domain CLH39_08250 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CLH39_08250 IPR003439 ABC transporter-like CLH39_08250 IPR017871 ABC transporter, conserved site CLH39_08250 IPR013611 Transport-associated OB, type 2 CLH39_08250 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_08250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_08250 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 CLH39_08255 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08255 IPR000847 Transcription regulator HTH, LysR CLH39_08255 IPR005119 LysR, substrate-binding CLH39_08255 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08265 IPR000045 Prepilin type IV endopeptidase, peptidase domain CLH39_08265 IPR010627 Peptidase A24A, N-terminal CLH39_08265 IPR014032 Peptidase A24A, prepilin type IV, bacterial CLH39_08290 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_08290 IPR039374 Siderophore-interacting protein CLH39_08290 IPR013113 FAD-binding 9, siderophore-interacting CLH39_08290 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_08290 IPR017938 Riboflavin synthase-like beta-barrel CLH39_08290 IPR007037 Siderophore-interacting protein, C-terminal domain CLH39_08305 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CLH39_08305 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CLH39_08305 IPR031475 Nucleotide-binding C-terminal domain CLH39_08305 IPR042213 Nucleotide-binding, C-terminal domain superfamily CLH39_08310 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal CLH39_08310 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site CLH39_08310 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal CLH39_08310 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily CLH39_08310 IPR033966 RuBisCO CLH39_08310 IPR036422 RuBisCO large subunit, N-terminal domain superfamily CLH39_08325 IPR003593 AAA+ ATPase domain CLH39_08325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_08325 IPR017871 ABC transporter, conserved site CLH39_08325 IPR003439 ABC transporter-like CLH39_08325 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_08330 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_08330 IPR035906 MetI-like superfamily CLH39_08330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_08335 IPR035906 MetI-like superfamily CLH39_08335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_08335 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_08340 IPR006377 Catabolite control protein A CLH39_08340 IPR028082 Periplasmic binding protein-like I CLH39_08340 IPR000843 LacI-type HTH domain CLH39_08340 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_08345 IPR000847 Transcription regulator HTH, LysR CLH39_08345 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08345 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08345 IPR005119 LysR, substrate-binding CLH39_08350 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_08350 IPR017150 Peptidase M20, glutamate carboxypeptidase CLH39_08350 IPR002933 Peptidase M20 CLH39_08350 IPR011650 Peptidase M20, dimerisation domain CLH39_08350 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLH39_08355 IPR004736 MFS transporter, metabolite:H symporter CLH39_08355 IPR005829 Sugar transporter, conserved site CLH39_08355 IPR036259 MFS transporter superfamily CLH39_08355 IPR020846 Major facilitator superfamily domain CLH39_08355 IPR011701 Major facilitator superfamily CLH39_08370 IPR004476 Ribonuclease II/ribonuclease R CLH39_08370 IPR011805 Ribonuclease R CLH39_08370 IPR013223 Ribonuclease B, N-terminal OB domain CLH39_08370 IPR013668 Ribonuclease R winged-helix domain CLH39_08370 IPR022967 RNA-binding domain, S1 CLH39_08370 IPR012340 Nucleic acid-binding, OB-fold CLH39_08370 IPR040476 RNase II/RNase R, cold shock domain CLH39_08370 IPR022966 Ribonuclease II/R, conserved site CLH39_08370 IPR001900 Ribonuclease II/R CLH39_08370 IPR003029 S1 domain CLH39_08370 IPR011129 Cold shock domain CLH39_08375 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLH39_08375 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CLH39_08375 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLH39_08375 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLH39_08375 IPR029064 50S ribosomal protein L30e-like CLH39_08375 IPR004441 RNA methyltransferase TrmH family CLH39_08375 IPR029028 Alpha/beta knot methyltransferases CLH39_08380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_08380 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_08380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_08380 IPR006237 L-methionine gamma-lyase CLH39_08380 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLH39_08385 IPR000524 Transcription regulator HTH, GntR CLH39_08385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_08385 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_08385 IPR004839 Aminotransferase, class I/classII CLH39_08385 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08385 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08390 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily CLH39_08390 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLH39_08390 IPR036909 Cytochrome c-like domain superfamily CLH39_08390 IPR009056 Cytochrome c-like domain CLH39_08395 IPR024167 Cytochrome c4-like CLH39_08395 IPR009056 Cytochrome c-like domain CLH39_08395 IPR036909 Cytochrome c-like domain superfamily CLH39_08395 IPR008168 Cytochrome c, class IC CLH39_08400 IPR014776 Tetrapyrrole methylase, subdomain 2 CLH39_08400 IPR014777 Tetrapyrrole methylase, subdomain 1 CLH39_08400 IPR006366 Uroporphyrin-III C-methyltransferase CLH39_08400 IPR000878 Tetrapyrrole methylase CLH39_08400 IPR019478 Sirohaem synthase, dimerisation domain CLH39_08400 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLH39_08400 IPR012409 Sirohaem synthase CLH39_08400 IPR035996 Tetrapyrrole methylase superfamily CLH39_08400 IPR036291 NAD(P)-binding domain superfamily CLH39_08400 IPR006367 Sirohaem synthase, N-terminal CLH39_08400 IPR028281 Siroheme synthase, central domain CLH39_08410 IPR013785 Aldolase-type TIM barrel CLH39_08410 IPR023885 4Fe4S-binding SPASM domain CLH39_08410 IPR017200 Coenzyme PQQ synthesis protein E CLH39_08410 IPR034391 Cmo-like SPASM domain containing CLH39_08410 IPR007197 Radical SAM CLH39_08410 IPR006638 Elp3/MiaB/NifB CLH39_08410 IPR030896 Heme b synthase CLH39_08415 IPR040523 AsnC-like ligand binding domain CLH39_08420 IPR000485 AsnC-type HTH domain CLH39_08420 IPR040523 AsnC-like ligand binding domain CLH39_08420 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08425 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08425 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08425 IPR000485 AsnC-type HTH domain CLH39_08425 IPR040523 AsnC-like ligand binding domain CLH39_08430 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily CLH39_08430 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLH39_08435 IPR036909 Cytochrome c-like domain superfamily CLH39_08435 IPR009056 Cytochrome c-like domain CLH39_08440 IPR028281 Siroheme synthase, central domain CLH39_08440 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLH39_08440 IPR006367 Sirohaem synthase, N-terminal CLH39_08440 IPR019478 Sirohaem synthase, dimerisation domain CLH39_08440 IPR012409 Sirohaem synthase CLH39_08440 IPR036291 NAD(P)-binding domain superfamily CLH39_08440 IPR006366 Uroporphyrin-III C-methyltransferase CLH39_08440 IPR014776 Tetrapyrrole methylase, subdomain 2 CLH39_08440 IPR035996 Tetrapyrrole methylase superfamily CLH39_08440 IPR000878 Tetrapyrrole methylase CLH39_08440 IPR014777 Tetrapyrrole methylase, subdomain 1 CLH39_08450 IPR020816 Histone-like DNA-binding protein, conserved site CLH39_08450 IPR000119 Histone-like DNA-binding protein CLH39_08450 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CLH39_08460 IPR010998 Integrase/recombinase, N-terminal CLH39_08460 IPR002104 Integrase, catalytic domain CLH39_08460 IPR035069 TTHA1013/TTHA0281-like CLH39_08460 IPR013762 Integrase-like, catalytic domain superfamily CLH39_08460 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLH39_08495 IPR007476 Putative exonuclease, RdgC CLH39_08515 IPR011344 Single-stranded DNA-binding protein CLH39_08515 IPR012340 Nucleic acid-binding, OB-fold CLH39_08515 IPR000424 Primosome PriB/single-strand DNA-binding CLH39_08580 IPR005021 Terminase large subunit, Lambdalikevirus-type CLH39_08580 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08580 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08620 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CLH39_08635 IPR033135 ClpP, histidine active site CLH39_08635 IPR018215 ClpP, Ser active site CLH39_08635 IPR001907 ATP-dependent Clp protease proteolytic subunit CLH39_08635 IPR029045 ClpP/crotonase-like domain superfamily CLH39_08635 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLH39_08740 IPR003738 SOS response associated peptidase (SRAP) CLH39_08740 IPR036590 SOS response associated peptidase-like CLH39_08760 IPR012340 Nucleic acid-binding, OB-fold CLH39_08760 IPR002059 Cold-shock protein, DNA-binding CLH39_08760 IPR019844 Cold-shock (CSD) domain CLH39_08760 IPR011129 Cold shock domain CLH39_08760 IPR012156 Cold shock, CspA CLH39_08775 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal CLH39_08775 IPR023506 Trans-aconitate 2-methyltransferase CLH39_08775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_08775 IPR013216 Methyltransferase type 11 CLH39_08780 IPR005669 Thiosulphate/Sulfate-binding protein CLH39_08780 IPR034408 Sulphate/thiosulphate-binding site CLH39_08780 IPR000957 Sulphate/thiosulphate-binding, conserved site CLH39_08785 IPR035906 MetI-like superfamily CLH39_08785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_08785 IPR005667 Sulphate ABC transporter permease protein 2 CLH39_08785 IPR011865 Sulphate ABC transporter, permease protein CysT CLH39_08790 IPR035906 MetI-like superfamily CLH39_08790 IPR011866 Sulphate ABC transporter, permease protein CysW CLH39_08790 IPR005667 Sulphate ABC transporter permease protein 2 CLH39_08790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_08795 IPR003593 AAA+ ATPase domain CLH39_08795 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CLH39_08795 IPR003439 ABC transporter-like CLH39_08795 IPR024765 TOBE-like domain CLH39_08795 IPR017871 ABC transporter, conserved site CLH39_08795 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_08795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_08795 IPR005666 Sulphate transport system permease protein 1 CLH39_08805 IPR002898 MotA/TolQ/ExbB proton channel CLH39_08810 IPR003400 Biopolymer transport protein ExbD/TolR CLH39_08815 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_08815 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08815 IPR001789 Signal transduction response regulator, receiver domain CLH39_08815 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_08815 IPR011006 CheY-like superfamily CLH39_08815 IPR039420 Transcriptional regulatory protein WalR-like CLH39_08820 IPR005467 Histidine kinase domain CLH39_08820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_08820 IPR013727 Two-component sensor kinase, N-terminal CLH39_08820 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_08820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_08820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_08820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_08825 IPR003855 Potassium transporter CLH39_08825 IPR023051 Potassium uptake protein, low affinity, Kup CLH39_08840 IPR007208 Na(+)/H(+) antiporter subunit F-like CLH39_08850 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLH39_08850 IPR004775 Na(+)/H(+) antiporter subunit D1 CLH39_08855 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CLH39_08855 IPR006673 Mnh complex subunit C1 CLH39_08860 IPR005663 Monovalent cation proton antiporter subunit A CLH39_08860 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CLH39_08860 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CLH39_08860 IPR025383 Domain of unknown function DUF4040 CLH39_08860 IPR005281 Monovalent cation:proton antiporter, subunit B CLH39_08860 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CLH39_08865 IPR010723 HemN, C-terminal CLH39_08865 IPR007197 Radical SAM CLH39_08865 IPR023404 Radical SAM, alpha/beta horseshoe CLH39_08865 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CLH39_08865 IPR034505 Anaerobic coproporphyrinogen-III oxidase CLH39_08865 IPR006638 Elp3/MiaB/NifB CLH39_08870 IPR004136 Nitronate monooxygenase CLH39_08870 IPR013785 Aldolase-type TIM barrel CLH39_08880 IPR001599 Alpha-2-macroglobulin CLH39_08880 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CLH39_08880 IPR002890 Macroglobulin domain CLH39_08880 IPR011625 Alpha-2-macroglobulin, bait region domain CLH39_08885 IPR023346 Lysozyme-like domain superfamily CLH39_08885 IPR036950 Penicillin binding protein transglycosylase domain CLH39_08885 IPR012338 Beta-lactamase/transpeptidase-like CLH39_08885 IPR001264 Glycosyl transferase, family 51 CLH39_08885 IPR001460 Penicillin-binding protein, transpeptidase CLH39_08900 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLH39_08900 IPR006130 Aspartate/ornithine carbamoyltransferase CLH39_08900 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CLH39_08900 IPR002082 Aspartate carbamoyltransferase CLH39_08900 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLH39_08905 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_08905 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_08905 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_08905 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_08905 IPR015590 Aldehyde dehydrogenase domain CLH39_08905 IPR010061 Methylmalonate-semialdehyde dehydrogenase CLH39_08910 IPR014083 Cation/acetate symporter ActP CLH39_08910 IPR038377 Sodium/glucose symporter superfamily CLH39_08910 IPR018212 Sodium/solute symporter, conserved site CLH39_08910 IPR001734 Sodium/solute symporter CLH39_08915 IPR007436 Protein of unknown function DUF485 CLH39_08920 IPR014748 Enoyl-CoA hydratase, C-terminal CLH39_08920 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_08920 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_08920 IPR029045 ClpP/crotonase-like domain superfamily CLH39_08925 IPR042099 AMP-dependent synthetase-like superfamily CLH39_08925 IPR000873 AMP-dependent synthetase/ligase CLH39_08925 IPR020845 AMP-binding, conserved site CLH39_08925 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_08935 IPR007476 Putative exonuclease, RdgC CLH39_08940 IPR036259 MFS transporter superfamily CLH39_08940 IPR005828 Major facilitator, sugar transporter-like CLH39_08940 IPR020846 Major facilitator superfamily domain CLH39_08940 IPR004736 MFS transporter, metabolite:H symporter CLH39_08940 IPR005829 Sugar transporter, conserved site CLH39_08940 IPR011701 Major facilitator superfamily CLH39_08945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_08945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_08945 IPR005467 Histidine kinase domain CLH39_08945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_08945 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_08945 IPR003660 HAMP domain CLH39_08945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_08950 IPR039420 Transcriptional regulatory protein WalR-like CLH39_08950 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_08950 IPR001789 Signal transduction response regulator, receiver domain CLH39_08950 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08950 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_08950 IPR011006 CheY-like superfamily CLH39_08955 IPR013765 DNA recombination and repair protein RecA CLH39_08955 IPR003593 AAA+ ATPase domain CLH39_08955 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_08955 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CLH39_08955 IPR020584 DNA recombination/repair protein RecA, conserved site CLH39_08955 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CLH39_08955 IPR023400 DNA recombination and repair protein RecA, C-terminal CLH39_08960 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08960 IPR003783 Regulatory protein RecX CLH39_08965 IPR000847 Transcription regulator HTH, LysR CLH39_08965 IPR005119 LysR, substrate-binding CLH39_08965 IPR036390 Winged helix DNA-binding domain superfamily CLH39_08965 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CLH39_08965 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_08970 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CLH39_08970 IPR006276 Cobalamin-independent methionine synthase CLH39_08970 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CLH39_08970 IPR038071 UROD/MetE-like superfamily CLH39_08980 IPR011761 ATP-grasp fold CLH39_08980 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CLH39_08980 IPR016102 Succinyl-CoA synthetase-like CLH39_08980 IPR013815 ATP-grasp fold, subdomain 1 CLH39_08980 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CLH39_08980 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CLH39_08980 IPR005809 Succinate--CoA synthetase, beta subunit CLH39_08985 IPR036291 NAD(P)-binding domain superfamily CLH39_08985 IPR003781 CoA-binding CLH39_08985 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CLH39_08985 IPR005810 Succinyl-CoA ligase, alpha subunit CLH39_08985 IPR016102 Succinyl-CoA synthetase-like CLH39_08985 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CLH39_08985 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CLH39_08990 IPR005496 Integral membrane protein TerC CLH39_08990 IPR022301 Integral membrane protein YjbE CLH39_08995 IPR022418 Porphobilinogen deaminase, C-terminal CLH39_08995 IPR000860 Porphobilinogen deaminase CLH39_08995 IPR022417 Porphobilinogen deaminase, N-terminal CLH39_08995 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CLH39_08995 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CLH39_09005 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CLH39_09015 IPR036649 Inorganic pyrophosphatase superfamily CLH39_09015 IPR008162 Inorganic pyrophosphatase CLH39_09020 IPR011234 Fumarylacetoacetase-like, C-terminal CLH39_09020 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLH39_09025 IPR007627 RNA polymerase sigma-70 region 2 CLH39_09025 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09025 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_09025 IPR039425 RNA polymerase sigma-70 like CLH39_09025 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_09025 IPR014284 RNA polymerase sigma-70 like domain CLH39_09025 IPR013325 RNA polymerase sigma factor, region 2 CLH39_09030 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CLH39_09030 IPR032623 FecR, N-terminal CLH39_09030 IPR006860 FecR protein CLH39_09035 IPR010917 TonB-dependent receptor, conserved site CLH39_09035 IPR010105 TonB-dependent siderophore receptor CLH39_09035 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CLH39_09035 IPR012910 TonB-dependent receptor, plug domain CLH39_09035 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_09035 IPR039423 TonB-dependent receptor-like CLH39_09035 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_09035 IPR010916 TonB box, conserved site CLH39_09035 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_09045 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_09045 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLH39_09045 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLH39_09045 IPR014284 RNA polymerase sigma-70 like domain CLH39_09045 IPR039425 RNA polymerase sigma-70 like CLH39_09045 IPR007627 RNA polymerase sigma-70 region 2 CLH39_09045 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09045 IPR013325 RNA polymerase sigma factor, region 2 CLH39_09055 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_09055 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_09055 IPR011662 Secretin/TonB, short N-terminal domain CLH39_09055 IPR039423 TonB-dependent receptor-like CLH39_09055 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_09055 IPR010917 TonB-dependent receptor, conserved site CLH39_09055 IPR010105 TonB-dependent siderophore receptor CLH39_09055 IPR012910 TonB-dependent receptor, plug domain CLH39_09085 IPR007055 BON domain CLH39_09085 IPR001775 GspD/PilQ family CLH39_09085 IPR032789 Pilus formation protein, N-terminal CLH39_09085 IPR004846 Type II/III secretion system CLH39_09085 IPR014004 Transport-associated and nodulation domain, bacteria CLH39_09090 IPR001482 Type II/IV secretion system protein CLH39_09090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09090 IPR022399 Helicase/secretion neighbourhood ATPase CLH39_09120 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_09120 IPR012910 TonB-dependent receptor, plug domain CLH39_09120 IPR011662 Secretin/TonB, short N-terminal domain CLH39_09120 IPR039423 TonB-dependent receptor-like CLH39_09120 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_09120 IPR010917 TonB-dependent receptor, conserved site CLH39_09120 IPR010105 TonB-dependent siderophore receptor CLH39_09120 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_09130 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLH39_09130 IPR030190 Macrolide export protein MacA CLH39_09130 IPR006143 RND efflux pump, membrane fusion protein CLH39_09135 IPR003593 AAA+ ATPase domain CLH39_09135 IPR003838 ABC transporter permease protein domain CLH39_09135 IPR003439 ABC transporter-like CLH39_09135 IPR025857 MacB-like periplasmic core domain CLH39_09135 IPR017871 ABC transporter, conserved site CLH39_09135 IPR017911 ABC transporter, macrolide export, ATP-binding domain CLH39_09135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09140 IPR003423 Outer membrane efflux protein CLH39_09140 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLH39_09150 IPR011009 Protein kinase-like domain superfamily CLH39_09150 IPR005280 Homoserine kinase, type II CLH39_09150 IPR002575 Aminoglycoside phosphotransferase CLH39_09155 IPR018517 tRNA-dihydrouridine synthase, conserved site CLH39_09155 IPR001269 tRNA-dihydrouridine synthase CLH39_09155 IPR004653 tRNA-dihydrouridine(20/20a) synthase CLH39_09155 IPR013785 Aldolase-type TIM barrel CLH39_09155 IPR035587 DUS-like, FMN-binding domain CLH39_09165 IPR017039 Virulence factor BrkB CLH39_09165 IPR023679 Uncharacterised protein family UPF0761, bacterial CLH39_09175 IPR003846 Protein adenylyltransferase SelO CLH39_09180 IPR035904 Chorismate synthase AroC superfamily CLH39_09180 IPR020541 Chorismate synthase, conserved site CLH39_09180 IPR000453 Chorismate synthase CLH39_09195 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLH39_09195 IPR029061 Thiamin diphosphate-binding fold CLH39_09195 IPR004660 Pyruvate dehydrogenase E1 component CLH39_09195 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CLH39_09195 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CLH39_09195 IPR005474 Transketolase, N-terminal CLH39_09200 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_09200 IPR004045 Glutathione S-transferase, N-terminal CLH39_09200 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_09200 IPR036249 Thioredoxin-like superfamily CLH39_09200 IPR004046 Glutathione S-transferase, C-terminal CLH39_09205 IPR003779 Carboxymuconolactone decarboxylase-like CLH39_09205 IPR004675 Alkylhydroperoxidase AhpD core CLH39_09205 IPR029032 AhpD-like CLH39_09210 IPR000524 Transcription regulator HTH, GntR CLH39_09210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_09210 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_09210 IPR004839 Aminotransferase, class I/classII CLH39_09210 IPR036390 Winged helix DNA-binding domain superfamily CLH39_09210 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09215 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLH39_09215 IPR004430 3-isopropylmalate dehydratase, large subunit CLH39_09215 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLH39_09215 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLH39_09215 IPR036008 Aconitase, iron-sulfur domain CLH39_09215 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CLH39_09220 IPR033940 3-isopropylmalate dehydratase, swivel domain CLH39_09220 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CLH39_09220 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLH39_09220 IPR004431 3-isopropylmalate dehydratase, small subunit CLH39_09225 IPR024084 Isopropylmalate dehydrogenase-like domain CLH39_09225 IPR004429 Isopropylmalate dehydrogenase CLH39_09225 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CLH39_09230 IPR036291 NAD(P)-binding domain superfamily CLH39_09230 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLH39_09230 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CLH39_09230 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CLH39_09230 IPR012080 Aspartate-semialdehyde dehydrogenase CLH39_09230 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CLH39_09240 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_09240 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CLH39_09240 IPR020095 Pseudouridine synthase I, TruA, C-terminal CLH39_09240 IPR001406 Pseudouridine synthase I, TruA CLH39_09250 IPR004681 TRAP transporter large membrane protein DctM CLH39_09250 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_09255 IPR013785 Aldolase-type TIM barrel CLH39_09255 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CLH39_09255 IPR011060 Ribulose-phosphate binding barrel CLH39_09260 IPR013740 Redoxin CLH39_09260 IPR036249 Thioredoxin-like superfamily CLH39_09260 IPR013766 Thioredoxin domain CLH39_09260 IPR017937 Thioredoxin, conserved site CLH39_09270 IPR016833 Putative sodium bile acid cotransporter CLH39_09270 IPR038770 Sodium/solute symporter superfamily CLH39_09275 IPR018062 HTH domain AraC-type, conserved site CLH39_09275 IPR011051 RmlC-like cupin domain superfamily CLH39_09275 IPR018060 DNA binding HTH domain, AraC-type CLH39_09275 IPR009057 Homeobox-like domain superfamily CLH39_09280 IPR017926 Glutamine amidotransferase CLH39_09280 IPR001674 GMP synthase, C-terminal CLH39_09280 IPR004739 GMP synthase, glutamine amidotransferase CLH39_09280 IPR022955 GMP synthase CLH39_09280 IPR025777 GMP synthetase ATP pyrophosphatase domain CLH39_09280 IPR022310 NAD/GMP synthase CLH39_09280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_09280 IPR029062 Class I glutamine amidotransferase-like CLH39_09285 IPR003691 Putative fluoride ion transporter CrcB CLH39_09290 IPR042099 AMP-dependent synthetase-like superfamily CLH39_09290 IPR000873 AMP-dependent synthetase/ligase CLH39_09290 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_09290 IPR020845 AMP-binding, conserved site CLH39_09295 IPR036183 YajQ-like superfamily CLH39_09295 IPR035570 UPF0234, N-terminal CLH39_09295 IPR035571 UPF0234-like, C-terminal CLH39_09295 IPR007551 Protein of unknown function DUF520 CLH39_09305 IPR000412 ABC-2 transporter CLH39_09305 IPR013525 ABC-2 type transporter CLH39_09310 IPR003593 AAA+ ATPase domain CLH39_09310 IPR003439 ABC transporter-like CLH39_09310 IPR017871 ABC transporter, conserved site CLH39_09310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09315 IPR016192 APOBEC/CMP deaminase, zinc-binding CLH39_09315 IPR002125 Cytidine and deoxycytidylate deaminase domain CLH39_09315 IPR016193 Cytidine deaminase-like CLH39_09315 IPR028883 tRNA-specific adenosine deaminase CLH39_09320 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CLH39_09320 IPR029062 Class I glutamine amidotransferase-like CLH39_09320 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CLH39_09320 IPR003507 Peptidase family S66 CLH39_09320 IPR040449 LD-carboxypeptidase, N-terminal CLH39_09320 IPR040921 LD-carboxypeptidase, C-terminal CLH39_09325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09325 IPR032781 ABC-transporter extension domain CLH39_09325 IPR003439 ABC transporter-like CLH39_09325 IPR003593 AAA+ ATPase domain CLH39_09330 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CLH39_09330 IPR035647 EF-G domain III/V-like CLH39_09330 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_09330 IPR001498 Impact, N-terminal CLH39_09330 IPR023582 Impact family CLH39_09330 IPR036956 Impact, N-terminal domain superfamily CLH39_09345 IPR005746 Thioredoxin CLH39_09345 IPR013766 Thioredoxin domain CLH39_09345 IPR017937 Thioredoxin, conserved site CLH39_09345 IPR036249 Thioredoxin-like superfamily CLH39_09350 IPR026033 Azaguanine-like transporters CLH39_09350 IPR006043 Xanthine/uracil/vitamin C permease CLH39_09355 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CLH39_09355 IPR017861 Kae1/TsaD family CLH39_09355 IPR000905 Gcp-like domain CLH39_09360 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CLH39_09365 IPR036523 SurE-like phosphatase/nucleotidase superfamily CLH39_09365 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CLH39_09365 IPR030048 Survival protein SurE CLH39_09370 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CLH39_09370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_09375 IPR018392 LysM domain CLH39_09375 IPR016047 Peptidase M23 CLH39_09375 IPR011055 Duplicated hybrid motif CLH39_09375 IPR036779 LysM domain superfamily CLH39_09380 IPR010280 (Uracil-5)-methyltransferase family CLH39_09380 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CLH39_09380 IPR002792 TRAM domain CLH39_09380 IPR030390 RNA methyltransferase TrmA, active site CLH39_09380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_09380 IPR012340 Nucleic acid-binding, OB-fold CLH39_09380 IPR030391 RNA methyltransferase TrmA, conserved site CLH39_09390 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_09390 IPR006076 FAD dependent oxidoreductase CLH39_09400 IPR000182 GNAT domain CLH39_09400 IPR016181 Acyl-CoA N-acyltransferase CLH39_09405 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp CLH39_09405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_09405 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative CLH39_09410 IPR009061 Putative DNA-binding domain superfamily CLH39_09410 IPR000551 MerR-type HTH domain CLH39_09410 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain CLH39_09410 IPR012925 TipAS antibiotic-recognition domain CLH39_09415 IPR020557 Fumarate lyase, conserved site CLH39_09415 IPR009049 Argininosuccinate lyase CLH39_09415 IPR029419 Argininosuccinate lyase, C-terminal CLH39_09415 IPR000362 Fumarate lyase family CLH39_09415 IPR022761 Fumarate lyase, N-terminal CLH39_09415 IPR008948 L-Aspartase-like CLH39_09415 IPR024083 Fumarase/histidase, N-terminal CLH39_09420 IPR006685 Mechanosensitive ion channel MscS CLH39_09420 IPR030192 Miniconductance mechanosensitive channel YbdG CLH39_09420 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLH39_09420 IPR010920 LSM domain superfamily CLH39_09425 IPR002332 Nitrogen regulatory protein P-II, urydylation site CLH39_09425 IPR002187 Nitrogen regulatory protein PII CLH39_09425 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLH39_09425 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLH39_09425 IPR017918 Nitrogen regulatory protein PII, conserved site CLH39_09430 IPR023210 NADP-dependent oxidoreductase domain CLH39_09430 IPR020471 Aldo/keto reductase CLH39_09430 IPR036812 NADP-dependent oxidoreductase domain superfamily CLH39_09435 IPR011701 Major facilitator superfamily CLH39_09435 IPR020846 Major facilitator superfamily domain CLH39_09435 IPR036259 MFS transporter superfamily CLH39_09440 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLH39_09440 IPR007440 Chorismate--pyruvate lyase CLH39_09445 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_09445 IPR006145 Pseudouridine synthase, RsuA/RluA CLH39_09445 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLH39_09445 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLH39_09445 IPR002942 RNA-binding S4 domain CLH39_09445 IPR036986 RNA-binding S4 domain superfamily CLH39_09445 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLH39_09450 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLH39_09450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_09450 IPR007473 Ribosomal RNA large subunit methyltransferase J CLH39_09455 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CLH39_09455 IPR030395 Glycerophosphodiester phosphodiesterase domain CLH39_09460 IPR027304 Trigger factor/SurA domain superfamily CLH39_09460 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLH39_09460 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLH39_09460 IPR023034 Peptidyl-prolyl isomerase SurA CLH39_09460 IPR015391 SurA N-terminal CLH39_09465 IPR016047 Peptidase M23 CLH39_09465 IPR013731 Opacity-associated protein A, N-terminal CLH39_09465 IPR018392 LysM domain CLH39_09465 IPR011055 Duplicated hybrid motif CLH39_09470 IPR004471 Branched-chain amino acid transport, AzlC CLH39_09470 IPR011606 Branched-chain amino acid transport, permease CLH39_09490 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLH39_09490 IPR011234 Fumarylacetoacetase-like, C-terminal CLH39_09495 IPR036390 Winged helix DNA-binding domain superfamily CLH39_09495 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09495 IPR000847 Transcription regulator HTH, LysR CLH39_09495 IPR005119 LysR, substrate-binding CLH39_09500 IPR005119 LysR, substrate-binding CLH39_09500 IPR000847 Transcription regulator HTH, LysR CLH39_09500 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09500 IPR036390 Winged helix DNA-binding domain superfamily CLH39_09500 IPR012787 Pca transcription factor PcaQ CLH39_09505 IPR002912 ACT domain CLH39_09505 IPR012675 Beta-grasp domain superfamily CLH39_09505 IPR003607 HD/PDEase domain CLH39_09505 IPR004811 RelA/SpoT family CLH39_09505 IPR007685 RelA/SpoT CLH39_09505 IPR004095 TGS CLH39_09505 IPR012676 TGS-like CLH39_09505 IPR033655 RelA, TGS domain CLH39_09510 IPR012293 RNA polymerase subunit, RPB6/omega CLH39_09510 IPR003716 DNA-directed RNA polymerase, omega subunit CLH39_09510 IPR006110 RNA polymerase, subunit omega/K/RPB6 CLH39_09510 IPR036161 RPB6/omega subunit-like superfamily CLH39_09515 IPR020590 Guanylate kinase, conserved site CLH39_09515 IPR017665 Guanylate kinase CLH39_09515 IPR008144 Guanylate kinase-like domain CLH39_09515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09515 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLH39_09535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_09535 IPR011193 Ornithine/lysine/arginine decarboxylase CLH39_09535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_09535 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_09535 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CLH39_09535 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CLH39_09535 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CLH39_09535 IPR000310 Orn/Lys/Arg decarboxylase, major domain CLH39_09540 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain CLH39_09540 IPR005119 LysR, substrate-binding CLH39_09540 IPR000847 Transcription regulator HTH, LysR CLH39_09540 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09540 IPR036390 Winged helix DNA-binding domain superfamily CLH39_09545 IPR039556 ICL/PEPM domain CLH39_09545 IPR012695 2-methylisocitrate lyase CLH39_09545 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CLH39_09545 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_09545 IPR040442 Pyruvate kinase-like domain superfamily CLH39_09555 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_09555 IPR020610 Thiolase, active site CLH39_09555 IPR020617 Thiolase, C-terminal CLH39_09555 IPR016039 Thiolase-like CLH39_09555 IPR002155 Thiolase CLH39_09555 IPR020616 Thiolase, N-terminal CLH39_09560 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_09560 IPR020617 Thiolase, C-terminal CLH39_09560 IPR020616 Thiolase, N-terminal CLH39_09560 IPR016039 Thiolase-like CLH39_09560 IPR020610 Thiolase, active site CLH39_09560 IPR002155 Thiolase CLH39_09580 IPR012693 ABC transporter, phosphonate import, PhnC CLH39_09580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09580 IPR003439 ABC transporter-like CLH39_09580 IPR003593 AAA+ ATPase domain CLH39_09580 IPR017871 ABC transporter, conserved site CLH39_09585 IPR006143 RND efflux pump, membrane fusion protein CLH39_09585 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLH39_09590 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CLH39_09590 IPR001036 Acriflavin resistance protein CLH39_09590 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLH39_09595 IPR003423 Outer membrane efflux protein CLH39_09595 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLH39_09600 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CLH39_09600 IPR013785 Aldolase-type TIM barrel CLH39_09600 IPR036130 Pyridoxine 5'-phosphate synthase CLH39_09620 IPR016039 Thiolase-like CLH39_09620 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_09620 IPR012793 Beta-ketoadipyl CoA thiolase CLH39_09620 IPR020610 Thiolase, active site CLH39_09620 IPR020617 Thiolase, C-terminal CLH39_09620 IPR020613 Thiolase, conserved site CLH39_09620 IPR020616 Thiolase, N-terminal CLH39_09620 IPR002155 Thiolase CLH39_09630 IPR023606 CoA-transferase family III domain superfamily CLH39_09630 IPR003673 CoA-transferase family III CLH39_09635 IPR000073 Alpha/beta hydrolase fold-1 CLH39_09635 IPR029058 Alpha/Beta hydrolase fold CLH39_09635 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CLH39_09640 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_09640 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_09640 IPR036291 NAD(P)-binding domain superfamily CLH39_09640 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_09645 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_09645 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_09645 IPR036291 NAD(P)-binding domain superfamily CLH39_09650 IPR036441 Dehydroquinase, class II superfamily CLH39_09650 IPR018509 Dehydroquinase, class II, conserved site CLH39_09650 IPR001874 Dehydroquinase, class II CLH39_09655 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_09655 IPR004682 TRAP transporter solute receptor, DctP family CLH39_09655 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_09660 IPR007387 TRAP transporter, small membrane protein DctQ CLH39_09665 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_09665 IPR004681 TRAP transporter large membrane protein DctM CLH39_09670 IPR011789 Cu(I)-responsive transcriptional regulator CLH39_09670 IPR009061 Putative DNA-binding domain superfamily CLH39_09670 IPR000551 MerR-type HTH domain CLH39_09670 IPR015358 Transcription regulator MerR, DNA binding CLH39_09675 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_09675 IPR023753 FAD/NAD(P)-binding domain CLH39_09675 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLH39_09675 IPR006258 Dihydrolipoamide dehydrogenase CLH39_09675 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CLH39_09675 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLH39_09675 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLH39_09680 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09680 IPR001845 HTH ArsR-type DNA-binding domain CLH39_09680 IPR011991 ArsR-like helix-turn-helix domain CLH39_09680 IPR036390 Winged helix DNA-binding domain superfamily CLH39_09685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_09685 IPR035647 EF-G domain III/V-like CLH39_09685 IPR000640 Elongation factor EFG, domain V-like CLH39_09685 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_09685 IPR031157 Tr-type G domain, conserved site CLH39_09685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09685 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_09685 IPR041095 Elongation Factor G, domain II CLH39_09685 IPR035649 EFG, domain V CLH39_09685 IPR009022 Elongation factor G, domain III CLH39_09685 IPR000795 Transcription factor, GTP-binding domain CLH39_09685 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_09685 IPR004540 Translation elongation factor EFG/EF2 CLH39_09685 IPR005517 Translation elongation factor EFG/EF2, domain IV CLH39_09685 IPR005225 Small GTP-binding protein domain CLH39_09695 IPR036249 Thioredoxin-like superfamily CLH39_09695 IPR003782 Copper chaperone SCO1/SenC CLH39_09700 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CLH39_09700 IPR001567 Peptidase M3A/M3B catalytic domain CLH39_09705 IPR036291 NAD(P)-binding domain superfamily CLH39_09705 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CLH39_09705 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLH39_09705 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLH39_09705 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CLH39_09710 IPR000792 Transcription regulator LuxR, C-terminal CLH39_09710 IPR001789 Signal transduction response regulator, receiver domain CLH39_09710 IPR011006 CheY-like superfamily CLH39_09710 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_09710 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_09715 IPR013767 PAS fold CLH39_09715 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_09715 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_09715 IPR000700 PAS-associated, C-terminal CLH39_09715 IPR001610 PAC motif CLH39_09715 IPR035965 PAS domain superfamily CLH39_09715 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_09715 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_09715 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_09715 IPR000014 PAS domain CLH39_09715 IPR005467 Histidine kinase domain CLH39_09720 IPR004660 Pyruvate dehydrogenase E1 component CLH39_09720 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CLH39_09720 IPR029061 Thiamin diphosphate-binding fold CLH39_09720 IPR005474 Transketolase, N-terminal CLH39_09720 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLH39_09720 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CLH39_09725 IPR011053 Single hybrid motif CLH39_09725 IPR036625 E3-binding domain superfamily CLH39_09725 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLH39_09725 IPR000089 Biotin/lipoyl attachment CLH39_09725 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CLH39_09725 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLH39_09725 IPR004167 Peripheral subunit-binding domain CLH39_09725 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLH39_09730 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLH39_09730 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLH39_09730 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CLH39_09730 IPR006258 Dihydrolipoamide dehydrogenase CLH39_09730 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLH39_09730 IPR023753 FAD/NAD(P)-binding domain CLH39_09730 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_09735 IPR036565 Mur-like, catalytic domain superfamily CLH39_09735 IPR004101 Mur ligase, C-terminal CLH39_09735 IPR018109 Folylpolyglutamate synthetase, conserved site CLH39_09735 IPR001645 Folylpolyglutamate synthetase CLH39_09735 IPR036615 Mur ligase, C-terminal domain superfamily CLH39_09735 IPR013221 Mur ligase, central CLH39_09745 IPR003825 Colicin V production, CvpA CLH39_09750 IPR029055 Nucleophile aminohydrolases, N-terminal CLH39_09750 IPR000836 Phosphoribosyltransferase domain CLH39_09750 IPR029057 Phosphoribosyltransferase-like CLH39_09750 IPR005854 Amidophosphoribosyltransferase CLH39_09750 IPR035584 Amidophosphoribosyltransferase, N-terminal CLH39_09750 IPR017932 Glutamine amidotransferase type 2 domain CLH39_09755 IPR001466 Beta-lactamase-related CLH39_09755 IPR012338 Beta-lactamase/transpeptidase-like CLH39_09755 IPR023650 Beta-lactamase, class-A active site CLH39_09765 IPR002771 Multiple antibiotic resistance (MarC)-related CLH39_09770 IPR002912 ACT domain CLH39_09770 IPR003607 HD/PDEase domain CLH39_09770 IPR006674 HD domain CLH39_09770 IPR002934 Polymerase, nucleotidyl transferase domain CLH39_09770 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CLH39_09770 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CLH39_09775 IPR001714 Peptidase M24, methionine aminopeptidase CLH39_09775 IPR000994 Peptidase M24 CLH39_09775 IPR036005 Creatinase/aminopeptidase-like CLH39_09775 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLH39_09780 IPR018130 Ribosomal protein S2, conserved site CLH39_09780 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CLH39_09780 IPR001865 Ribosomal protein S2 CLH39_09780 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CLH39_09785 IPR001816 Translation elongation factor EFTs/EF1B CLH39_09785 IPR009060 UBA-like superfamily CLH39_09785 IPR036402 Elongation factor Ts, dimerisation domain superfamily CLH39_09785 IPR018101 Translation elongation factor Ts, conserved site CLH39_09785 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CLH39_09790 IPR015963 Uridylate kinase, bacteria CLH39_09790 IPR011817 Uridylate kinase CLH39_09790 IPR001048 Aspartate/glutamate/uridylate kinase CLH39_09790 IPR036393 Acetylglutamate kinase-like superfamily CLH39_09795 IPR023584 Ribosome recycling factor domain CLH39_09795 IPR002661 Ribosome recycling factor CLH39_09795 IPR036191 RRF superfamily CLH39_09800 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CLH39_09800 IPR001441 Decaprenyl diphosphate synthase-like CLH39_09800 IPR036424 Decaprenyl diphosphate synthase-like superfamily CLH39_09805 IPR000374 Phosphatidate cytidylyltransferase CLH39_09810 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CLH39_09810 IPR036291 NAD(P)-binding domain superfamily CLH39_09810 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLH39_09810 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CLH39_09810 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CLH39_09810 IPR026877 DXP reductoisomerase C-terminal domain CLH39_09815 IPR008915 Peptidase M50 CLH39_09815 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CLH39_09815 IPR036034 PDZ superfamily CLH39_09815 IPR041489 PDZ domain 6 CLH39_09815 IPR001478 PDZ domain CLH39_09820 IPR000184 Bacterial surface antigen (D15) CLH39_09820 IPR034746 POTRA domain CLH39_09820 IPR023707 Outer membrane protein assembly factor BamA CLH39_09820 IPR039910 Surface antigen D15-like CLH39_09820 IPR010827 POTRA domain, BamA/TamA-like CLH39_09825 IPR005632 Chaperone protein Skp CLH39_09825 IPR024930 Skp domain superfamily CLH39_09830 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CLH39_09830 IPR011004 Trimeric LpxA-like superfamily CLH39_09830 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CLH39_09830 IPR001451 Hexapeptide repeat CLH39_09835 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLH39_09835 IPR029069 HotDog domain superfamily CLH39_09835 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CLH39_09840 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CLH39_09840 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CLH39_09840 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CLH39_09840 IPR011004 Trimeric LpxA-like superfamily CLH39_09840 IPR001451 Hexapeptide repeat CLH39_09845 IPR003835 Glycosyl transferase, family 19 CLH39_09850 IPR001352 Ribonuclease HII/HIII CLH39_09850 IPR024567 Ribonuclease HII/HIII domain CLH39_09850 IPR012337 Ribonuclease H-like superfamily CLH39_09850 IPR022898 Ribonuclease HII CLH39_09850 IPR036397 Ribonuclease H superfamily CLH39_09855 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLH39_09855 IPR029064 50S ribosomal protein L30e-like CLH39_09855 IPR029028 Alpha/beta knot methyltransferases CLH39_09855 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLH39_09855 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLH39_09860 IPR036928 Amidase signature (AS) superfamily CLH39_09860 IPR023631 Amidase signature domain CLH39_09860 IPR020556 Amidase, conserved site CLH39_09860 IPR000120 Amidase CLH39_09865 IPR026530 Phosphoenolpyruvate synthase regulatory protein CLH39_09865 IPR005177 Bifunctional kinase-pyrophosphorylase CLH39_09870 IPR036637 Phosphohistidine domain superfamily CLH39_09870 IPR023151 PEP-utilising enzyme, conserved site CLH39_09870 IPR000121 PEP-utilising enzyme, C-terminal CLH39_09870 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CLH39_09870 IPR018274 PEP-utilising enzyme, active site CLH39_09870 IPR006319 Phosphoenolpyruvate synthase CLH39_09870 IPR008279 PEP-utilising enzyme, mobile domain CLH39_09870 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_09870 IPR040442 Pyruvate kinase-like domain superfamily CLH39_09870 IPR013815 ATP-grasp fold, subdomain 1 CLH39_09875 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLH39_09875 IPR009057 Homeobox-like domain superfamily CLH39_09875 IPR001647 DNA-binding HTH domain, TetR-type CLH39_09880 IPR023753 FAD/NAD(P)-binding domain CLH39_09880 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_09885 IPR023620 Small protein B CLH39_09885 IPR020081 SsrA-binding protein, conserved site CLH39_09885 IPR000037 SsrA-binding protein CLH39_09890 IPR023393 START-like domain superfamily CLH39_09890 IPR005031 Coenzyme Q-binding protein COQ10, START domain CLH39_09895 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLH39_09895 IPR037021 RnfH superfamily CLH39_09895 IPR005346 RnfH protein CLH39_09900 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_09900 IPR006089 Acyl-CoA dehydrogenase, conserved site CLH39_09900 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_09900 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_09900 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_09900 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_09900 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_09910 IPR036291 NAD(P)-binding domain superfamily CLH39_09910 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLH39_09910 IPR011548 3-hydroxyisobutyrate dehydrogenase CLH39_09910 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLH39_09910 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_09910 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_09910 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLH39_09910 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLH39_09915 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CLH39_09915 IPR028896 Aminomethyltransferase-like CLH39_09915 IPR006222 Aminomethyltransferase, folate-binding domain CLH39_09915 IPR017703 YgfZ/GcvT conserved site CLH39_09920 IPR003770 Endolytic murein transglycosylase CLH39_09930 IPR015199 DNA polymerase III, delta subunit, C-terminal CLH39_09930 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLH39_09930 IPR004622 DNA polymerase III, delta prime subunit CLH39_09930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_09935 IPR001130 TatD family CLH39_09935 IPR032466 Metal-dependent hydrolase CLH39_09935 IPR015991 Uncharacterised hydrolase TatD-type CLH39_09935 IPR018228 Deoxyribonuclease, TatD-related, conserved site CLH39_09945 IPR029039 Flavoprotein-like superfamily CLH39_09945 IPR005025 NADPH-dependent FMN reductase-like CLH39_09955 IPR036249 Thioredoxin-like superfamily CLH39_09955 IPR004045 Glutathione S-transferase, N-terminal CLH39_09955 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_09955 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_09955 IPR004046 Glutathione S-transferase, C-terminal CLH39_09960 IPR006659 Arsenate reductase CLH39_09960 IPR006660 Arsenate reductase-like CLH39_09960 IPR036249 Thioredoxin-like superfamily CLH39_09965 IPR023480 Uncharacterised protein family UPF0312/YceI CLH39_09965 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CLH39_09965 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CLH39_09975 IPR016174 Di-haem cytochrome, transmembrane CLH39_09975 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CLH39_09995 IPR016181 Acyl-CoA N-acyltransferase CLH39_09995 IPR000182 GNAT domain CLH39_10015 IPR036291 NAD(P)-binding domain superfamily CLH39_10015 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_10015 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_10020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10020 IPR025501 ATP binding protein MinD CLH39_10020 IPR010223 ATP binding protein MinD, bacterial-type CLH39_10020 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLH39_10065 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_10065 IPR000847 Transcription regulator HTH, LysR CLH39_10065 IPR005119 LysR, substrate-binding CLH39_10065 IPR036390 Winged helix DNA-binding domain superfamily CLH39_10070 IPR020843 Polyketide synthase, enoylreductase domain CLH39_10070 IPR036291 NAD(P)-binding domain superfamily CLH39_10070 IPR004627 L-threonine 3-dehydrogenase CLH39_10070 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLH39_10070 IPR011032 GroES-like superfamily CLH39_10070 IPR013149 Alcohol dehydrogenase, C-terminal CLH39_10070 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_10100 IPR012675 Beta-grasp domain superfamily CLH39_10100 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_10100 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_10100 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_10100 IPR017938 Riboflavin synthase-like beta-barrel CLH39_10100 IPR000951 Phthalate dioxygenase reductase CLH39_10100 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_10100 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_10100 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_10105 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CLH39_10105 IPR009057 Homeobox-like domain superfamily CLH39_10105 IPR018060 DNA binding HTH domain, AraC-type CLH39_10105 IPR018062 HTH domain AraC-type, conserved site CLH39_10120 IPR010105 TonB-dependent siderophore receptor CLH39_10120 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_10120 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_10120 IPR039426 Vitamin B12 transporter BtuB-like CLH39_10120 IPR012910 TonB-dependent receptor, plug domain CLH39_10130 IPR029062 Class I glutamine amidotransferase-like CLH39_10130 IPR002818 DJ-1/PfpI CLH39_10135 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLH39_10135 IPR001279 Metallo-beta-lactamase CLH39_10140 IPR036380 Isochorismatase-like superfamily CLH39_10140 IPR000868 Isochorismatase-like CLH39_10155 IPR023845 Domain of unknown function DUF3817, transmembrane CLH39_10160 IPR018062 HTH domain AraC-type, conserved site CLH39_10160 IPR018060 DNA binding HTH domain, AraC-type CLH39_10160 IPR009057 Homeobox-like domain superfamily CLH39_10160 IPR002818 DJ-1/PfpI CLH39_10160 IPR029062 Class I glutamine amidotransferase-like CLH39_10165 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_10165 IPR011662 Secretin/TonB, short N-terminal domain CLH39_10165 IPR010105 TonB-dependent siderophore receptor CLH39_10165 IPR039423 TonB-dependent receptor-like CLH39_10165 IPR012910 TonB-dependent receptor, plug domain CLH39_10165 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_10165 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_10165 IPR010917 TonB-dependent receptor, conserved site CLH39_10205 IPR020891 Uncharacterised protein family UPF0758, conserved site CLH39_10205 IPR025657 RadC-like JAB domain CLH39_10205 IPR037518 MPN domain CLH39_10205 IPR001405 Uncharacterised protein family UPF0758 CLH39_10225 IPR012910 TonB-dependent receptor, plug domain CLH39_10225 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_10225 IPR039423 TonB-dependent receptor-like CLH39_10225 IPR010916 TonB box, conserved site CLH39_10225 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_10225 IPR010105 TonB-dependent siderophore receptor CLH39_10225 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_10260 IPR022394 Methylamine utilisation protein, MauG CLH39_10260 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CLH39_10260 IPR009056 Cytochrome c-like domain CLH39_10260 IPR004852 Di-haem cytochrome c peroxidase CLH39_10260 IPR036909 Cytochrome c-like domain superfamily CLH39_10270 IPR011276 TonB-dependent haem/haemoglobin receptor CLH39_10270 IPR012910 TonB-dependent receptor, plug domain CLH39_10270 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_10270 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_10270 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_10270 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CLH39_10270 IPR039426 Vitamin B12 transporter BtuB-like CLH39_10270 IPR010916 TonB box, conserved site CLH39_10290 IPR033954 Disulphide bond isomerase, DsbC/G CLH39_10290 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CLH39_10290 IPR017937 Thioredoxin, conserved site CLH39_10290 IPR036249 Thioredoxin-like superfamily CLH39_10290 IPR012336 Thioredoxin-like fold CLH39_10315 IPR002145 Ribbon-helix-helix protein, CopG CLH39_10315 IPR010985 Ribbon-helix-helix CLH39_10460 IPR022488 Polyphosphate kinase-2-related CLH39_10460 IPR022489 Polyphosphate:AMP phosphotransferase CLH39_10460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10470 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CLH39_10470 IPR013815 ATP-grasp fold, subdomain 1 CLH39_10470 IPR016185 Pre-ATP-grasp domain superfamily CLH39_10470 IPR011054 Rudiment single hybrid motif CLH39_10470 IPR011761 ATP-grasp fold CLH39_10470 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase CLH39_10475 IPR011707 Multicopper oxidase, type 3 CLH39_10475 IPR011706 Multicopper oxidase, type 2 CLH39_10475 IPR001117 Multicopper oxidase, type 1 CLH39_10475 IPR002355 Multicopper oxidase, copper-binding site CLH39_10475 IPR008972 Cupredoxin CLH39_10475 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_10485 IPR004107 Integrase, SAM-like, N-terminal CLH39_10485 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLH39_10485 IPR013762 Integrase-like, catalytic domain superfamily CLH39_10485 IPR002104 Integrase, catalytic domain CLH39_10485 IPR011931 Tyrosine recombinase XerC CLH39_10485 IPR023009 Tyrosine recombinase XerC/XerD CLH39_10485 IPR010998 Integrase/recombinase, N-terminal CLH39_10485 IPR011932 Tyrosine recombinase XerD CLH39_10490 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_10490 IPR000847 Transcription regulator HTH, LysR CLH39_10490 IPR005119 LysR, substrate-binding CLH39_10490 IPR036390 Winged helix DNA-binding domain superfamily CLH39_10505 IPR019884 YtoQ family protein CLH39_10510 IPR023298 P-type ATPase, transmembrane domain superfamily CLH39_10510 IPR027256 P-type ATPase, subfamily IB CLH39_10510 IPR001757 P-type ATPase CLH39_10510 IPR018303 P-type ATPase, phosphorylation site CLH39_10510 IPR023299 P-type ATPase, cytoplasmic domain N CLH39_10510 IPR008250 P-type ATPase, A domain superfamily CLH39_10510 IPR036163 Heavy metal-associated domain superfamily CLH39_10510 IPR023214 HAD superfamily CLH39_10510 IPR036412 HAD-like superfamily CLH39_10510 IPR006121 Heavy metal-associated domain, HMA CLH39_10510 IPR017969 Heavy-metal-associated, conserved site CLH39_10510 IPR006122 Heavy metal-associated domain, copper ion-binding CLH39_10520 IPR000847 Transcription regulator HTH, LysR CLH39_10520 IPR005119 LysR, substrate-binding CLH39_10520 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_10520 IPR036390 Winged helix DNA-binding domain superfamily CLH39_10530 IPR036259 MFS transporter superfamily CLH39_10530 IPR011701 Major facilitator superfamily CLH39_10530 IPR020846 Major facilitator superfamily domain CLH39_10530 IPR004747 Cyanate transport system protein CLH39_10535 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_10535 IPR002938 FAD-binding domain CLH39_10540 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_10540 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_10540 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_10540 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_10540 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_10540 IPR015590 Aldehyde dehydrogenase domain CLH39_10550 IPR001303 Class II aldolase/adducin N-terminal CLH39_10550 IPR013447 Rhamnulose-1-phosphate aldolase CLH39_10550 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLH39_10555 IPR003313 AraC-type arabinose-binding/dimerisation domain CLH39_10555 IPR009057 Homeobox-like domain superfamily CLH39_10555 IPR018060 DNA binding HTH domain, AraC-type CLH39_10555 IPR011051 RmlC-like cupin domain superfamily CLH39_10555 IPR018062 HTH domain AraC-type, conserved site CLH39_10555 IPR014710 RmlC-like jelly roll fold CLH39_10560 IPR009056 Cytochrome c-like domain CLH39_10560 IPR036909 Cytochrome c-like domain superfamily CLH39_10560 IPR002324 Cytochrome c, class ID CLH39_10565 IPR006016 UspA CLH39_10565 IPR006015 Universal stress protein A family CLH39_10565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_10570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_10570 IPR013216 Methyltransferase type 11 CLH39_10575 IPR011042 Six-bladed beta-propeller, TolB-like CLH39_10575 IPR012938 Glucose/Sorbosone dehydrogenase CLH39_10575 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLH39_10580 IPR005677 Fumarate hydratase, class II CLH39_10580 IPR008948 L-Aspartase-like CLH39_10580 IPR022761 Fumarate lyase, N-terminal CLH39_10580 IPR024083 Fumarase/histidase, N-terminal CLH39_10580 IPR018951 Fumarase C, C-terminal CLH39_10580 IPR020557 Fumarate lyase, conserved site CLH39_10580 IPR000362 Fumarate lyase family CLH39_10585 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CLH39_10585 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CLH39_10585 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CLH39_10585 IPR006422 D-erythrose-4-phosphate dehydrogenase CLH39_10585 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CLH39_10585 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CLH39_10585 IPR036291 NAD(P)-binding domain superfamily CLH39_10590 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_10590 IPR036291 NAD(P)-binding domain superfamily CLH39_10590 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_10595 IPR036291 NAD(P)-binding domain superfamily CLH39_10595 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLH39_10595 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLH39_10595 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLH39_10595 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLH39_10600 IPR011042 Six-bladed beta-propeller, TolB-like CLH39_10600 IPR029058 Alpha/Beta hydrolase fold CLH39_10600 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CLH39_10605 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_10605 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_10605 IPR040079 Glutathione Transferase family CLH39_10605 IPR004045 Glutathione S-transferase, N-terminal CLH39_10605 IPR004046 Glutathione S-transferase, C-terminal CLH39_10605 IPR036249 Thioredoxin-like superfamily CLH39_10610 IPR017871 ABC transporter, conserved site CLH39_10610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10610 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_10610 IPR003439 ABC transporter-like CLH39_10610 IPR003593 AAA+ ATPase domain CLH39_10615 IPR003439 ABC transporter-like CLH39_10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10615 IPR003593 AAA+ ATPase domain CLH39_10615 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_10615 IPR017871 ABC transporter, conserved site CLH39_10620 IPR001851 ABC transporter, permease CLH39_10620 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CLH39_10625 IPR001851 ABC transporter, permease CLH39_10630 IPR028081 Leucine-binding protein domain CLH39_10630 IPR000709 Leu/Ile/Val-binding protein CLH39_10630 IPR028082 Periplasmic binding protein-like I CLH39_10640 IPR006061 Solute-binding family 1, conserved site CLH39_10640 IPR006059 Bacterial extracellular solute-binding protein CLH39_10645 IPR035906 MetI-like superfamily CLH39_10645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_10650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_10650 IPR035906 MetI-like superfamily CLH39_10650 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE CLH39_10655 IPR003593 AAA+ ATPase domain CLH39_10655 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CLH39_10655 IPR017871 ABC transporter, conserved site CLH39_10655 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_10655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10655 IPR040582 MalK, OB fold domain CLH39_10655 IPR003439 ABC transporter-like CLH39_10660 IPR000709 Leu/Ile/Val-binding protein CLH39_10660 IPR028082 Periplasmic binding protein-like I CLH39_10660 IPR028081 Leucine-binding protein domain CLH39_10665 IPR012347 Ferritin-like CLH39_10665 IPR009078 Ferritin-like superfamily CLH39_10665 IPR008331 Ferritin/DPS protein domain CLH39_10665 IPR023188 DNA-binding protein Dps, conserved site CLH39_10665 IPR002177 DNA-binding protein Dps CLH39_10670 IPR005119 LysR, substrate-binding CLH39_10670 IPR000847 Transcription regulator HTH, LysR CLH39_10670 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_10670 IPR036390 Winged helix DNA-binding domain superfamily CLH39_10675 IPR001650 Helicase, C-terminal CLH39_10675 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_10675 IPR011545 DEAD/DEAH box helicase domain CLH39_10675 IPR004609 ATP-dependent DNA helicase RecG CLH39_10675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10675 IPR012340 Nucleic acid-binding, OB-fold CLH39_10675 IPR033454 RecG, wedge domain CLH39_10680 IPR006056 RidA family CLH39_10680 IPR019897 RidA, conserved site CLH39_10680 IPR035959 RutC-like superfamily CLH39_10680 IPR006175 YjgF/YER057c/UK114 family CLH39_10685 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_10685 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_10685 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_10685 IPR017938 Riboflavin synthase-like beta-barrel CLH39_10685 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLH39_10685 IPR033892 Ferredoxin--NADP reductase, bacteria CLH39_10685 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_10690 IPR026045 Ferric binding protein CLH39_10695 IPR005667 Sulphate ABC transporter permease protein 2 CLH39_10695 IPR035906 MetI-like superfamily CLH39_10695 IPR011865 Sulphate ABC transporter, permease protein CysT CLH39_10695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_10700 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CLH39_10700 IPR003439 ABC transporter-like CLH39_10700 IPR017871 ABC transporter, conserved site CLH39_10700 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_10700 IPR003593 AAA+ ATPase domain CLH39_10700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10700 IPR013611 Transport-associated OB, type 2 CLH39_10720 IPR036390 Winged helix DNA-binding domain superfamily CLH39_10720 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_10720 IPR000847 Transcription regulator HTH, LysR CLH39_10720 IPR005119 LysR, substrate-binding CLH39_10725 IPR016181 Acyl-CoA N-acyltransferase CLH39_10725 IPR000182 GNAT domain CLH39_10730 IPR027302 Glutamine synthetase, N-terminal conserved site CLH39_10730 IPR001637 Glutamine synthetase class-I, adenylation site CLH39_10730 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLH39_10730 IPR008147 Glutamine synthetase, beta-Grasp domain CLH39_10730 IPR036651 Glutamine synthetase, N-terminal domain superfamily CLH39_10730 IPR027303 Glutamine synthetase, glycine-rich site CLH39_10730 IPR004809 Glutamine synthetase type I CLH39_10730 IPR008146 Glutamine synthetase, catalytic domain CLH39_10735 IPR007197 Radical SAM CLH39_10735 IPR004559 Heme chaperone HemW-like CLH39_10735 IPR010723 HemN, C-terminal CLH39_10735 IPR006638 Elp3/MiaB/NifB CLH39_10735 IPR034505 Anaerobic coproporphyrinogen-III oxidase CLH39_10735 IPR023404 Radical SAM, alpha/beta horseshoe CLH39_10740 IPR002637 Ham1-like protein CLH39_10740 IPR020922 dITP/XTP pyrophosphatase CLH39_10740 IPR029001 Inosine triphosphate pyrophosphatase-like CLH39_10745 IPR002381 Ribonuclease PH, bacterial-type CLH39_10745 IPR018336 Ribonuclease PH, conserved site CLH39_10745 IPR001247 Exoribonuclease, phosphorolytic domain 1 CLH39_10745 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_10745 IPR027408 PNPase/RNase PH domain superfamily CLH39_10745 IPR036345 Exoribonuclease, PH domain 2 superfamily CLH39_10745 IPR015847 Exoribonuclease, phosphorolytic domain 2 CLH39_10750 IPR041685 AAA domain, group 15 CLH39_10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10755 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CLH39_10755 IPR029052 Metallo-dependent phosphatase-like CLH39_10755 IPR004593 Nuclease SbcCD subunit D CLH39_10755 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLH39_10760 IPR013551 Domain of unknown function DUF1732 CLH39_10760 IPR005229 Conserved hypothetical protein CHP00255 CLH39_10760 IPR013527 YicC-like, N-terminal CLH39_10775 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_10775 IPR002938 FAD-binding domain CLH39_10795 IPR005829 Sugar transporter, conserved site CLH39_10795 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLH39_10795 IPR011701 Major facilitator superfamily CLH39_10795 IPR020846 Major facilitator superfamily domain CLH39_10795 IPR036259 MFS transporter superfamily CLH39_10805 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_10805 IPR011650 Peptidase M20, dimerisation domain CLH39_10805 IPR017439 Amidohydrolase CLH39_10805 IPR002933 Peptidase M20 CLH39_10810 IPR002068 Alpha crystallin/Hsp20 domain CLH39_10810 IPR031107 Small heat shock protein HSP20 CLH39_10810 IPR008978 HSP20-like chaperone CLH39_10815 IPR006042 Xanthine/uracil permease CLH39_10815 IPR017588 Uric acid permease UacT-like CLH39_10815 IPR006043 Xanthine/uracil/vitamin C permease CLH39_10820 IPR032466 Metal-dependent hydrolase CLH39_10820 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_10820 IPR006680 Amidohydrolase-related CLH39_10825 IPR004304 Acetamidase/Formamidase CLH39_10835 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_10835 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_10835 IPR012910 TonB-dependent receptor, plug domain CLH39_10835 IPR039426 Vitamin B12 transporter BtuB-like CLH39_10835 IPR010105 TonB-dependent siderophore receptor CLH39_10835 IPR010917 TonB-dependent receptor, conserved site CLH39_10835 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_10840 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_10840 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_10840 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_10845 IPR005614 NrfD family CLH39_10850 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CLH39_10850 IPR006656 Molybdopterin oxidoreductase CLH39_10850 IPR006657 Molybdopterin dinucleotide-binding domain CLH39_10850 IPR037946 Tetrathionate reductase subunit A, MopB domain CLH39_10850 IPR009010 Aspartate decarboxylase-like domain superfamily CLH39_10850 IPR041929 Tetrathionate reductase subunit A, N-terminal CLH39_10855 IPR005064 Bordetella uptake gene CLH39_10855 IPR042100 Bordetella uptake gene, domain 1 CLH39_10860 IPR036197 NarG-like superfamily CLH39_10860 IPR012830 Citrate utilization protein B CLH39_10865 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_10865 IPR010960 Flavocytochrome c CLH39_10865 IPR011031 Multihaem cytochrome CLH39_10865 IPR036280 Multiheme cytochrome superfamily CLH39_10865 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CLH39_10865 IPR012286 Tetrahaem cytochrome domain CLH39_10865 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CLH39_10870 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_10870 IPR000847 Transcription regulator HTH, LysR CLH39_10870 IPR036390 Winged helix DNA-binding domain superfamily CLH39_10870 IPR005119 LysR, substrate-binding CLH39_10875 IPR001789 Signal transduction response regulator, receiver domain CLH39_10875 IPR003593 AAA+ ATPase domain CLH39_10875 IPR011006 CheY-like superfamily CLH39_10875 IPR009057 Homeobox-like domain superfamily CLH39_10875 IPR002197 DNA binding HTH domain, Fis-type CLH39_10875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_10875 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_10875 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_10875 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_10875 IPR025944 Sigma-54 interaction domain, conserved site CLH39_10880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_10880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_10880 IPR005467 Histidine kinase domain CLH39_10880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_10880 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CLH39_10880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_10880 IPR029151 Periplasmic sensor-like domain superfamily CLH39_10880 IPR033479 Double Cache domain 1 CLH39_10880 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_10885 IPR018107 Sodium:dicarboxylate symporter, conserved site CLH39_10885 IPR023954 C4-dicarboxylate transport protein CLH39_10885 IPR001991 Sodium:dicarboxylate symporter CLH39_10885 IPR036458 Sodium:dicarboxylate symporter superfamily CLH39_10890 IPR008948 L-Aspartase-like CLH39_10890 IPR000362 Fumarate lyase family CLH39_10890 IPR020557 Fumarate lyase, conserved site CLH39_10890 IPR018951 Fumarase C, C-terminal CLH39_10890 IPR024083 Fumarase/histidase, N-terminal CLH39_10890 IPR004708 Aspartate ammonia-lyase CLH39_10890 IPR022761 Fumarate lyase, N-terminal CLH39_10900 IPR017938 Riboflavin synthase-like beta-barrel CLH39_10900 IPR026017 Lumazine-binding domain CLH39_10900 IPR001783 Lumazine-binding protein CLH39_10900 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CLH39_10905 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_10905 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_10905 IPR036291 NAD(P)-binding domain superfamily CLH39_10910 IPR036661 Luciferase-like domain superfamily CLH39_10910 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A CLH39_10910 IPR011251 Luciferase-like domain CLH39_10915 IPR011283 Acetoacetyl-CoA reductase CLH39_10915 IPR036291 NAD(P)-binding domain superfamily CLH39_10915 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_10915 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_10925 IPR025713 Motility protein B, N-terminal domain CLH39_10925 IPR036737 OmpA-like domain superfamily CLH39_10925 IPR006665 OmpA-like domain CLH39_10930 IPR002898 MotA/TolQ/ExbB proton channel CLH39_10930 IPR000540 Flagellar motor protein MotA, conserved site CLH39_10940 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLH39_10940 IPR012338 Beta-lactamase/transpeptidase-like CLH39_10940 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLH39_10945 IPR005119 LysR, substrate-binding CLH39_10945 IPR000847 Transcription regulator HTH, LysR CLH39_10945 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_10945 IPR036390 Winged helix DNA-binding domain superfamily CLH39_10950 IPR042100 Bordetella uptake gene, domain 1 CLH39_10950 IPR005064 Bordetella uptake gene CLH39_10985 IPR004805 DNA polymerase III, alpha subunit CLH39_10985 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CLH39_10985 IPR040982 DNA polymerase III alpha subunit finger domain CLH39_10985 IPR023073 DNA polymerase, error-prone CLH39_10985 IPR029460 DNA polymerase, helix-hairpin-helix motif CLH39_10985 IPR004013 PHP domain CLH39_10985 IPR016195 Polymerase/histidinol phosphatase-like CLH39_10985 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLH39_10990 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CLH39_10990 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CLH39_10990 IPR019004 Uncharacterised protein YqeY/Aim41 CLH39_10990 IPR042184 YqeY/Aim41, N-terminal domain CLH39_11000 IPR013785 Aldolase-type TIM barrel CLH39_11000 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLH39_11005 IPR003148 Regulator of K+ conductance, N-terminal CLH39_11005 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CLH39_11005 IPR006037 Regulator of K+ conductance, C-terminal CLH39_11005 IPR036291 NAD(P)-binding domain superfamily CLH39_11010 IPR004772 TrkH potassium transport family CLH39_11010 IPR003445 Cation transporter CLH39_11025 IPR016187 C-type lectin fold CLH39_11025 IPR005532 Sulfatase-modifying factor enzyme CLH39_11025 IPR042095 Sulfatase-modifying factor enzyme superfamily CLH39_11035 IPR038728 Uncharacterized membrane protein YkvI CLH39_11040 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_11040 IPR006076 FAD dependent oxidoreductase CLH39_11045 IPR036909 Cytochrome c-like domain superfamily CLH39_11045 IPR009056 Cytochrome c-like domain CLH39_11045 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CLH39_11050 IPR036909 Cytochrome c-like domain superfamily CLH39_11050 IPR009056 Cytochrome c-like domain CLH39_11060 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_11060 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLH39_11060 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_11060 IPR011780 D-serine ammonia-lyase CLH39_11065 IPR009057 Homeobox-like domain superfamily CLH39_11065 IPR018060 DNA binding HTH domain, AraC-type CLH39_11065 IPR041522 CdaR, GGDEF-like domain CLH39_11070 IPR011032 GroES-like superfamily CLH39_11070 IPR010085 Crotonyl-CoA reductase CLH39_11070 IPR013149 Alcohol dehydrogenase, C-terminal CLH39_11070 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_11070 IPR020843 Polyketide synthase, enoylreductase domain CLH39_11070 IPR036291 NAD(P)-binding domain superfamily CLH39_11135 IPR008258 Transglycosylase SLT domain 1 CLH39_11135 IPR023346 Lysozyme-like domain superfamily CLH39_11150 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CLH39_11150 IPR004346 CagE, TrbE, VirB component of type IV transporter system CLH39_11150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11175 IPR026264 Type IV secretion system protein VirB8/PtlE CLH39_11175 IPR007430 Bacterial virulence protein VirB8 CLH39_11175 IPR032710 NTF2-like domain superfamily CLH39_11185 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CLH39_11185 IPR042217 Type IV secretion system, VirB10/TrbI CLH39_11190 IPR014155 Type IV secretion system protein VirB11 CLH39_11190 IPR001482 Type II/IV secretion system protein CLH39_11190 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_11190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11225 IPR033186 Helicase HerA-like C-terminal CLH39_11225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11230 IPR040668 TraI, 2B/2B-like domain CLH39_11230 IPR040987 TraI, N-terminal subdomain CLH39_11230 IPR014862 TrwC relaxase CLH39_11230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11230 IPR009767 DNA helicase, TraI type CLH39_11230 IPR014129 Conjugative transfer relaxase protein TraI CLH39_11230 IPR014059 Conjugative relaxase, N-terminal CLH39_11260 IPR004437 ParB/RepB/Spo0J partition protein CLH39_11260 IPR036086 ParB/Sulfiredoxin superfamily CLH39_11260 IPR003115 ParB/Sulfiredoxin CLH39_11285 IPR015995 Microcystin LR degradation protein MlrC, N-terminal CLH39_11285 IPR010799 Microcystin LR degradation protein MlrC, C-terminal CLH39_11285 IPR009197 Microcystin LR degradation protein MlrC CLH39_11290 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CLH39_11290 IPR011650 Peptidase M20, dimerisation domain CLH39_11290 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_11290 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLH39_11290 IPR002933 Peptidase M20 CLH39_11295 IPR003010 Carbon-nitrogen hydrolase CLH39_11295 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_11300 IPR003593 AAA+ ATPase domain CLH39_11300 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLH39_11300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11300 IPR003439 ABC transporter-like CLH39_11300 IPR017871 ABC transporter, conserved site CLH39_11305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_11305 IPR035906 MetI-like superfamily CLH39_11310 IPR035906 MetI-like superfamily CLH39_11310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_11315 IPR000914 Solute-binding protein family 5 domain CLH39_11315 IPR039424 Solute-binding protein family 5 CLH39_11315 IPR030678 Peptide/nickel binding protein, MppA-type CLH39_11315 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_11315 IPR023765 Solute-binding protein family 5, conserved site CLH39_11320 IPR002933 Peptidase M20 CLH39_11320 IPR010158 Amidase, carbamoylase-type CLH39_11320 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_11320 IPR011650 Peptidase M20, dimerisation domain CLH39_11325 IPR010081 Diaminopropionate ammonia-lyase CLH39_11325 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_11325 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_11325 IPR019871 Diaminopropionate ammonia-lyase, subgroup CLH39_11330 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_11330 IPR001347 Sugar isomerase (SIS) CLH39_11330 IPR035472 RpiR-like, SIS domain CLH39_11330 IPR000281 Helix-turn-helix protein RpiR CLH39_11330 IPR009057 Homeobox-like domain superfamily CLH39_11340 IPR016185 Pre-ATP-grasp domain superfamily CLH39_11340 IPR011095 D-alanine--D-alanine ligase, C-terminal CLH39_11340 IPR005905 D-alanine--D-alanine ligase CLH39_11340 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CLH39_11340 IPR013815 ATP-grasp fold, subdomain 1 CLH39_11340 IPR011761 ATP-grasp fold CLH39_11340 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CLH39_11345 IPR036565 Mur-like, catalytic domain superfamily CLH39_11345 IPR004101 Mur ligase, C-terminal CLH39_11345 IPR000713 Mur ligase, N-terminal catalytic domain CLH39_11345 IPR013221 Mur ligase, central CLH39_11345 IPR035911 MurE/MurF, N-terminal CLH39_11345 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CLH39_11345 IPR036615 Mur ligase, C-terminal domain superfamily CLH39_11350 IPR036615 Mur ligase, C-terminal domain superfamily CLH39_11350 IPR004101 Mur ligase, C-terminal CLH39_11350 IPR013221 Mur ligase, central CLH39_11350 IPR000713 Mur ligase, N-terminal catalytic domain CLH39_11350 IPR036565 Mur-like, catalytic domain superfamily CLH39_11350 IPR035911 MurE/MurF, N-terminal CLH39_11350 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CLH39_11370 IPR010129 Type I secretion membrane fusion protein, HlyD family CLH39_11370 IPR006144 Secretion protein HlyD, conserved site CLH39_11375 IPR010132 ATPase, type I secretion system, HlyB CLH39_11375 IPR039421 Type I protein exporter CLH39_11375 IPR011527 ABC transporter type 1, transmembrane domain CLH39_11375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11375 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_11375 IPR003439 ABC transporter-like CLH39_11375 IPR017871 ABC transporter, conserved site CLH39_11375 IPR005074 Peptidase C39, bacteriocin processing CLH39_11375 IPR039395 Peptidase C39-like A CLH39_11375 IPR003593 AAA+ ATPase domain CLH39_11385 IPR010130 Type I secretion outer membrane protein, TolC CLH39_11385 IPR003423 Outer membrane efflux protein CLH39_11395 IPR011006 CheY-like superfamily CLH39_11395 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_11395 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_11395 IPR001789 Signal transduction response regulator, receiver domain CLH39_11395 IPR039420 Transcriptional regulatory protein WalR-like CLH39_11395 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_11405 IPR034904 Fe-S cluster assembly domain superfamily CLH39_11405 IPR002744 MIP18 family-like CLH39_11410 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CLH39_11415 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_11415 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_11415 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLH39_11415 IPR000192 Aminotransferase class V domain CLH39_11415 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_11415 IPR010970 Cysteine desulfurase, SufS CLH39_11420 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CLH39_11420 IPR011542 SUF system FeS cluster assembly, SufD CLH39_11420 IPR000825 SUF system FeS cluster assembly, SufBD CLH39_11425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11425 IPR010230 FeS cluster assembly SUF system, ATPase SufC CLH39_11425 IPR017871 ABC transporter, conserved site CLH39_11425 IPR003439 ABC transporter-like CLH39_11425 IPR003593 AAA+ ATPase domain CLH39_11430 IPR010231 SUF system FeS cluster assembly, SufB CLH39_11430 IPR000825 SUF system FeS cluster assembly, SufBD CLH39_11430 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CLH39_11435 IPR030489 Transcription regulator Rrf2-type, conserved site CLH39_11435 IPR000944 Transcription regulator Rrf2-type CLH39_11435 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_11435 IPR036390 Winged helix DNA-binding domain superfamily CLH39_11435 IPR010242 Transcription factor HTH, IscR CLH39_11440 IPR003593 AAA+ ATPase domain CLH39_11440 IPR011527 ABC transporter type 1, transmembrane domain CLH39_11440 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_11440 IPR017871 ABC transporter, conserved site CLH39_11440 IPR003439 ABC transporter-like CLH39_11440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11440 IPR039421 Type I protein exporter CLH39_11455 IPR011197 Uncharacterised conserved protein UCP012318 CLH39_11455 IPR007402 Protein of unknown function DUF455 CLH39_11455 IPR009078 Ferritin-like superfamily CLH39_11465 IPR020816 Histone-like DNA-binding protein, conserved site CLH39_11465 IPR000119 Histone-like DNA-binding protein CLH39_11465 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CLH39_11465 IPR005684 Integration host factor, alpha subunit CLH39_11470 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CLH39_11470 IPR012340 Nucleic acid-binding, OB-fold CLH39_11470 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CLH39_11470 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLH39_11470 IPR005147 tRNA synthetase, B5-domain CLH39_11470 IPR002547 tRNA-binding domain CLH39_11470 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CLH39_11470 IPR009061 Putative DNA-binding domain superfamily CLH39_11470 IPR005121 Ferrodoxin-fold anticodon-binding domain CLH39_11470 IPR005146 B3/B4 tRNA-binding domain CLH39_11470 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CLH39_11475 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CLH39_11475 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CLH39_11475 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CLH39_11475 IPR002319 Phenylalanyl-tRNA synthetase CLH39_11475 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CLH39_11475 IPR006195 Aminoacyl-tRNA synthetase, class II CLH39_11480 IPR005813 Ribosomal protein L20 CLH39_11480 IPR035566 Ribosomal protein L20, C-terminal CLH39_11485 IPR021137 Ribosomal protein L35 CLH39_11485 IPR018265 Ribosomal protein L35, conserved site CLH39_11485 IPR037229 Ribosomal protein L35 superfamily CLH39_11485 IPR001706 Ribosomal protein L35, non-mitochondrial CLH39_11490 IPR025158 Mg chelatase-related protein, C-terminal domain CLH39_11490 IPR004482 Mg chelatase-related protein CLH39_11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11490 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_11490 IPR003593 AAA+ ATPase domain CLH39_11490 IPR000523 Magnesium chelatase ChlI domain CLH39_11490 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_11515 IPR008279 PEP-utilising enzyme, mobile domain CLH39_11515 IPR023151 PEP-utilising enzyme, conserved site CLH39_11515 IPR040442 Pyruvate kinase-like domain superfamily CLH39_11515 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_11515 IPR036618 PtsI, HPr-binding domain superfamily CLH39_11515 IPR008731 Phosphotransferase system, enzyme I N-terminal CLH39_11515 IPR006318 Phosphotransferase system, enzyme I-like CLH39_11515 IPR018274 PEP-utilising enzyme, active site CLH39_11515 IPR000121 PEP-utilising enzyme, C-terminal CLH39_11515 IPR024692 Phosphotransferase system, enzyme I CLH39_11515 IPR036637 Phosphohistidine domain superfamily CLH39_11520 IPR000032 Phosphocarrier protein HPr-like CLH39_11520 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLH39_11520 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLH39_11520 IPR035895 HPr-like superfamily CLH39_11530 IPR016185 Pre-ATP-grasp domain superfamily CLH39_11530 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CLH39_11530 IPR006284 Glutathione synthetase, prokaryotic CLH39_11530 IPR013815 ATP-grasp fold, subdomain 1 CLH39_11530 IPR011761 ATP-grasp fold CLH39_11530 IPR004215 Prokaryotic glutathione synthetase, N-terminal CLH39_11535 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CLH39_11535 IPR019815 Translation initiation factor 3, C-terminal CLH39_11535 IPR019813 Translation initiation factor 3, conserved site CLH39_11535 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CLH39_11535 IPR019814 Translation initiation factor 3, N-terminal CLH39_11535 IPR001288 Translation initiation factor 3 CLH39_11540 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CLH39_11540 IPR004154 Anticodon-binding CLH39_11540 IPR036621 Anticodon-binding domain superfamily CLH39_11540 IPR012675 Beta-grasp domain superfamily CLH39_11540 IPR006195 Aminoacyl-tRNA synthetase, class II CLH39_11540 IPR002320 Threonine-tRNA ligase, class IIa CLH39_11540 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CLH39_11540 IPR033728 Threonine-tRNA ligase catalytic core domain CLH39_11540 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLH39_11540 IPR012676 TGS-like CLH39_11540 IPR004095 TGS CLH39_11555 IPR030877 Sulfofructose kinase CLH39_11555 IPR029056 Ribokinase-like CLH39_11555 IPR011611 Carbohydrate kinase PfkB CLH39_11555 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLH39_11555 IPR002139 Ribokinase/fructokinase CLH39_11565 IPR005590 Protein of unknown function DUF333 CLH39_11575 IPR041698 Methyltransferase domain 25 CLH39_11575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_11580 IPR002810 NfeD-like, C-terminal domain CLH39_11585 IPR018080 Band 7/stomatin-like, conserved site CLH39_11585 IPR036013 Band 7/SPFH domain superfamily CLH39_11585 IPR001972 Stomatin family CLH39_11585 IPR001107 Band 7 domain CLH39_11585 IPR032435 Band 7, C-terminal extension CLH39_11605 IPR017588 Uric acid permease UacT-like CLH39_11605 IPR006042 Xanthine/uracil permease CLH39_11605 IPR006043 Xanthine/uracil/vitamin C permease CLH39_11610 IPR032466 Metal-dependent hydrolase CLH39_11610 IPR023512 Deaminase MtaD/DadD CLH39_11610 IPR006680 Amidohydrolase-related CLH39_11610 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_11620 IPR028082 Periplasmic binding protein-like I CLH39_11620 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_11620 IPR000843 LacI-type HTH domain CLH39_11630 IPR001123 Amino acid exporter protein, LeuE-type CLH39_11630 IPR004778 Homoserine/Threonine efflux protein CLH39_11635 IPR011701 Major facilitator superfamily CLH39_11635 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family CLH39_11635 IPR020846 Major facilitator superfamily domain CLH39_11635 IPR005829 Sugar transporter, conserved site CLH39_11635 IPR036259 MFS transporter superfamily CLH39_11640 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_11640 IPR036291 NAD(P)-binding domain superfamily CLH39_11640 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_11645 IPR017938 Riboflavin synthase-like beta-barrel CLH39_11645 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_11645 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_11645 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLH39_11645 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_11645 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_11645 IPR012675 Beta-grasp domain superfamily CLH39_11645 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_11645 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_11645 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_11650 IPR032710 NTF2-like domain superfamily CLH39_11650 IPR017641 Benzoate 1,2-dioxygenase, small subunit CLH39_11650 IPR000391 Ring-hydroxylating dioxygenase beta subunit CLH39_11655 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_11655 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CLH39_11655 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_11655 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CLH39_11655 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_11660 IPR036390 Winged helix DNA-binding domain superfamily CLH39_11660 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_11660 IPR000847 Transcription regulator HTH, LysR CLH39_11660 IPR005119 LysR, substrate-binding CLH39_11665 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_11665 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_11665 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_11665 IPR017938 Riboflavin synthase-like beta-barrel CLH39_11665 IPR012675 Beta-grasp domain superfamily CLH39_11665 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_11665 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_11665 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_11665 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_11670 IPR006756 Phenol hydroxylase CLH39_11675 IPR007029 YHS domain CLH39_11675 IPR012348 Ribonucleotide reductase-like CLH39_11675 IPR009078 Ferritin-like superfamily CLH39_11675 IPR003430 Methane/phenol/toluene hydroxylase CLH39_11680 IPR036889 Monooxygenase component MmoB/DmpM superfamily CLH39_11680 IPR003454 Monooxygenase component MmoB/DmpM CLH39_11685 IPR012348 Ribonucleotide reductase-like CLH39_11685 IPR003430 Methane/phenol/toluene hydroxylase CLH39_11685 IPR012078 Methane/phenol monooxygenase, hydroxylase component CLH39_11685 IPR009078 Ferritin-like superfamily CLH39_11690 IPR010353 Phenol hydroxylase subunit CLH39_11695 IPR002197 DNA binding HTH domain, Fis-type CLH39_11695 IPR010523 Activator of aromatic catabolism CLH39_11695 IPR004096 4-vinyl reductase, 4VR CLH39_11695 IPR025944 Sigma-54 interaction domain, conserved site CLH39_11695 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_11695 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLH39_11695 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_11695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11695 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CLH39_11695 IPR003593 AAA+ ATPase domain CLH39_11695 IPR009057 Homeobox-like domain superfamily CLH39_11715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_11715 IPR017871 ABC transporter, conserved site CLH39_11715 IPR003439 ABC transporter-like CLH39_11715 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_11715 IPR003593 AAA+ ATPase domain CLH39_11720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_11720 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_11720 IPR035906 MetI-like superfamily CLH39_11725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_11725 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_11725 IPR035906 MetI-like superfamily CLH39_11730 IPR001320 Ionotropic glutamate receptor CLH39_11730 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_11730 IPR018313 Solute-binding protein family 3, conserved site CLH39_11755 IPR036913 YegP-like superfamily CLH39_11755 IPR010879 Domain of unknown function DUF1508 CLH39_11760 IPR005744 Hly-III CLH39_11760 IPR004254 AdipoR/Haemolysin-III-related CLH39_11785 IPR023346 Lysozyme-like domain superfamily CLH39_11785 IPR002196 Glycoside hydrolase, family 24 CLH39_11785 IPR034690 Endolysin T4 type CLH39_11855 IPR010359 IrrE N-terminal-like domain CLH39_11910 IPR005335 Terminase small subunit CLH39_11910 IPR038713 Terminase small subunit, N-terminal domain superfamily CLH39_11910 IPR018925 Phage terminase small subunit CLH39_11980 IPR006197 Peptidase S24, LexA-like CLH39_11980 IPR015927 Peptidase S24/S26A/S26B/S26C CLH39_11980 IPR036286 LexA/Signal peptidase-like superfamily CLH39_11980 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_11980 IPR036390 Winged helix DNA-binding domain superfamily CLH39_11980 IPR006200 Transcription regulator LexA CLH39_11980 IPR006199 LexA repressor, DNA-binding domain CLH39_11980 IPR039418 LexA-like CLH39_12035 IPR011344 Single-stranded DNA-binding protein CLH39_12035 IPR000424 Primosome PriB/single-strand DNA-binding CLH39_12035 IPR012340 Nucleic acid-binding, OB-fold CLH39_12045 IPR007476 Putative exonuclease, RdgC CLH39_12070 IPR010998 Integrase/recombinase, N-terminal CLH39_12070 IPR013762 Integrase-like, catalytic domain superfamily CLH39_12070 IPR002104 Integrase, catalytic domain CLH39_12070 IPR038488 Integrase, DNA-binding domain superfamily CLH39_12070 IPR025166 Integrase, DNA-binding domain CLH39_12070 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLH39_12085 IPR033932 YtcJ like CLH39_12085 IPR032466 Metal-dependent hydrolase CLH39_12085 IPR013108 Amidohydrolase 3 CLH39_12085 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_12090 IPR023210 NADP-dependent oxidoreductase domain CLH39_12090 IPR020471 Aldo/keto reductase CLH39_12090 IPR036812 NADP-dependent oxidoreductase domain superfamily CLH39_12095 IPR023513 Quinolinate synthase A, type 1 CLH39_12095 IPR036094 Quinolinate synthetase A superfamily CLH39_12095 IPR003473 Quinolinate synthetase A CLH39_12100 IPR005288 L-aspartate oxidase CLH39_12100 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_12100 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CLH39_12100 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CLH39_12100 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CLH39_12105 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_12105 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12105 IPR039420 Transcriptional regulatory protein WalR-like CLH39_12105 IPR011006 CheY-like superfamily CLH39_12105 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_12105 IPR001789 Signal transduction response regulator, receiver domain CLH39_12110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_12110 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_12110 IPR003660 HAMP domain CLH39_12110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_12110 IPR005467 Histidine kinase domain CLH39_12110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_12110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_12125 IPR013611 Transport-associated OB, type 2 CLH39_12125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12125 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_12125 IPR015853 ABC transporter, ferric cation import, FbpC CLH39_12125 IPR003439 ABC transporter-like CLH39_12125 IPR017871 ABC transporter, conserved site CLH39_12125 IPR003593 AAA+ ATPase domain CLH39_12130 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_12130 IPR006076 FAD dependent oxidoreductase CLH39_12130 IPR023080 D-amino acid dehydrogenase DadA CLH39_12140 IPR014883 VRR-NUC domain CLH39_12140 IPR033315 Fanconi-associated nuclease 1-like CLH39_12140 IPR040603 Fanconi-associated nuclease 1, SAP domain CLH39_12140 IPR011856 tRNA endonuclease-like domain superfamily CLH39_12150 IPR004779 Carboxylate/Amino Acid/Amine Transporter CLH39_12150 IPR000620 EamA domain CLH39_12160 IPR011078 Pyridoxal phosphate homeostasis protein CLH39_12160 IPR029066 PLP-binding barrel CLH39_12160 IPR001608 Alanine racemase, N-terminal CLH39_12170 IPR036259 MFS transporter superfamily CLH39_12170 IPR011701 Major facilitator superfamily CLH39_12170 IPR020846 Major facilitator superfamily domain CLH39_12175 IPR002938 FAD-binding domain CLH39_12175 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_12180 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12180 IPR000835 MarR-type HTH domain CLH39_12180 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12205 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CLH39_12205 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLH39_12205 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CLH39_12205 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLH39_12205 IPR019833 Manganese/iron superoxide dismutase, binding site CLH39_12205 IPR001189 Manganese/iron superoxide dismutase CLH39_12215 IPR000286 Histone deacetylase family CLH39_12215 IPR023696 Ureohydrolase domain superfamily CLH39_12215 IPR023801 Histone deacetylase domain CLH39_12215 IPR037138 Histone deacetylase domain superfamily CLH39_12220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12220 IPR017871 ABC transporter, conserved site CLH39_12220 IPR003439 ABC transporter-like CLH39_12220 IPR003593 AAA+ ATPase domain CLH39_12225 IPR003689 Zinc/iron permease CLH39_12230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12230 IPR006073 GTP binding domain CLH39_12235 IPR006073 GTP binding domain CLH39_12235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12240 IPR004711 Benzoate transporter CLH39_12245 IPR003464 Muconolactone delta-isomerase CLH39_12245 IPR026029 Muconolactone isomerase domain CLH39_12245 IPR011008 Dimeric alpha-beta barrel CLH39_12250 IPR029058 Alpha/Beta hydrolase fold CLH39_12250 IPR000073 Alpha/beta hydrolase fold-1 CLH39_12250 IPR022742 Serine aminopeptidase, S33 CLH39_12250 IPR026968 3-oxoadipate enol-lactonase 1/2 CLH39_12255 IPR004165 Coenzyme A transferase family I CLH39_12255 IPR012791 3-oxoacid CoA-transferase, subunit B CLH39_12255 IPR004164 Coenzyme A transferase active site CLH39_12255 IPR037171 NagB/RpiA transferase-like CLH39_12260 IPR012792 3-oxoacid CoA-transferase, subunit A CLH39_12260 IPR004165 Coenzyme A transferase family I CLH39_12260 IPR004163 Coenzyme A transferase binding site CLH39_12260 IPR037171 NagB/RpiA transferase-like CLH39_12265 IPR015889 Intradiol ring-cleavage dioxygenase, core CLH39_12265 IPR007535 Catechol dioxygenase, N-terminal CLH39_12265 IPR012801 Catechol 1,2-dioxygenase, proteobacteria CLH39_12265 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CLH39_12270 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLH39_12270 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLH39_12270 IPR013370 Muconate/chloromuconate cycloisomerase CLH39_12270 IPR029017 Enolase-like, N-terminal CLH39_12270 IPR029065 Enolase C-terminal domain-like CLH39_12270 IPR036849 Enolase-like, C-terminal domain superfamily CLH39_12270 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLH39_12275 IPR000847 Transcription regulator HTH, LysR CLH39_12275 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12275 IPR005119 LysR, substrate-binding CLH39_12275 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12290 IPR000891 Pyruvate carboxyltransferase CLH39_12290 IPR005668 2-isopropylmalate synthase CLH39_12290 IPR039371 LeuA, N-terminal catalytic TIM barrel domain CLH39_12290 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CLH39_12290 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CLH39_12290 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CLH39_12290 IPR013785 Aldolase-type TIM barrel CLH39_12295 IPR009057 Homeobox-like domain superfamily CLH39_12295 IPR037923 Transcription regulator HTH-like CLH39_12295 IPR018060 DNA binding HTH domain, AraC-type CLH39_12295 IPR023609 Transcription regulator HTH, RhaS CLH39_12295 IPR014710 RmlC-like jelly roll fold CLH39_12295 IPR020449 Transcription regulator HTH, AraC- type CLH39_12295 IPR003313 AraC-type arabinose-binding/dimerisation domain CLH39_12295 IPR018062 HTH domain AraC-type, conserved site CLH39_12315 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12315 IPR011991 ArsR-like helix-turn-helix domain CLH39_12315 IPR001845 HTH ArsR-type DNA-binding domain CLH39_12315 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12320 IPR029032 AhpD-like CLH39_12320 IPR004675 Alkylhydroperoxidase AhpD core CLH39_12320 IPR003779 Carboxymuconolactone decarboxylase-like CLH39_12345 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_12345 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_12345 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_12345 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_12345 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_12345 IPR006089 Acyl-CoA dehydrogenase, conserved site CLH39_12345 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_12350 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_12350 IPR000873 AMP-dependent synthetase/ligase CLH39_12350 IPR020845 AMP-binding, conserved site CLH39_12355 IPR003673 CoA-transferase family III CLH39_12355 IPR023606 CoA-transferase family III domain superfamily CLH39_12360 IPR012675 Beta-grasp domain superfamily CLH39_12360 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLH39_12360 IPR003749 Sulfur carrier ThiS/MoaD-like CLH39_12365 IPR028090 JAB domain, prokaryotic CLH39_12365 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain CLH39_12365 IPR037518 MPN domain CLH39_12370 IPR001763 Rhodanese-like domain CLH39_12370 IPR036873 Rhodanese-like domain superfamily CLH39_12370 IPR000594 THIF-type NAD/FAD binding fold CLH39_12370 IPR035985 Ubiquitin-activating enzyme CLH39_12380 IPR001077 O-methyltransferase domain CLH39_12380 IPR016461 O-methyltransferase COMT-type CLH39_12380 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_12380 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12405 IPR033135 ClpP, histidine active site CLH39_12405 IPR001907 ATP-dependent Clp protease proteolytic subunit CLH39_12405 IPR029045 ClpP/crotonase-like domain superfamily CLH39_12405 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLH39_12410 IPR040079 Glutathione Transferase family CLH39_12410 IPR004045 Glutathione S-transferase, N-terminal CLH39_12410 IPR036249 Thioredoxin-like superfamily CLH39_12410 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_12410 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_12415 IPR020084 NUDIX hydrolase, conserved site CLH39_12415 IPR000086 NUDIX hydrolase domain CLH39_12415 IPR022925 NADH pyrophosphatase NudC CLH39_12415 IPR015797 NUDIX hydrolase-like domain superfamily CLH39_12415 IPR015376 Zinc ribbon, NADH pyrophosphatase CLH39_12435 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12435 IPR000847 Transcription regulator HTH, LysR CLH39_12435 IPR005119 LysR, substrate-binding CLH39_12435 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12440 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_12440 IPR040079 Glutathione Transferase family CLH39_12440 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_12440 IPR004045 Glutathione S-transferase, N-terminal CLH39_12440 IPR036249 Thioredoxin-like superfamily CLH39_12450 IPR004276 Glycosyltransferase family 28, N-terminal domain CLH39_12455 IPR011075 Tetracyclin repressor-like, C-terminal domain CLH39_12455 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLH39_12455 IPR001647 DNA-binding HTH domain, TetR-type CLH39_12455 IPR009057 Homeobox-like domain superfamily CLH39_12485 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12485 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12485 IPR000847 Transcription regulator HTH, LysR CLH39_12485 IPR005119 LysR, substrate-binding CLH39_12490 IPR013785 Aldolase-type TIM barrel CLH39_12490 IPR004136 Nitronate monooxygenase CLH39_12500 IPR017938 Riboflavin synthase-like beta-barrel CLH39_12500 IPR012292 Globin/Protoglobin CLH39_12500 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_12500 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_12500 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_12500 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_12500 IPR023950 Flavohemoprotein CLH39_12500 IPR009050 Globin-like superfamily CLH39_12500 IPR000971 Globin CLH39_12505 IPR037479 Tautomerase, MSAD family CLH39_12505 IPR014347 Tautomerase/MIF superfamily CLH39_12515 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CLH39_12515 IPR006143 RND efflux pump, membrane fusion protein CLH39_12515 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLH39_12525 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CLH39_12525 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB CLH39_12530 IPR000847 Transcription regulator HTH, LysR CLH39_12530 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12530 IPR037416 Nodulation protein D, PBP2 CLH39_12530 IPR005119 LysR, substrate-binding CLH39_12530 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12540 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLH39_12540 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CLH39_12540 IPR029056 Ribokinase-like CLH39_12545 IPR036259 MFS transporter superfamily CLH39_12545 IPR023680 Purine ribonucleoside efflux pump, NepI CLH39_12545 IPR020846 Major facilitator superfamily domain CLH39_12545 IPR011701 Major facilitator superfamily CLH39_12550 IPR018060 DNA binding HTH domain, AraC-type CLH39_12550 IPR009057 Homeobox-like domain superfamily CLH39_12550 IPR032783 AraC-type transcription regulator, ligand-binding domain CLH39_12550 IPR020449 Transcription regulator HTH, AraC- type CLH39_12550 IPR018062 HTH domain AraC-type, conserved site CLH39_12550 IPR014710 RmlC-like jelly roll fold CLH39_12550 IPR011051 RmlC-like cupin domain superfamily CLH39_12555 IPR039420 Transcriptional regulatory protein WalR-like CLH39_12555 IPR011006 CheY-like superfamily CLH39_12555 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_12555 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12555 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_12555 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CLH39_12555 IPR001789 Signal transduction response regulator, receiver domain CLH39_12560 IPR001789 Signal transduction response regulator, receiver domain CLH39_12560 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_12560 IPR013656 PAS fold-4 CLH39_12560 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_12560 IPR011006 CheY-like superfamily CLH39_12560 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_12560 IPR000700 PAS-associated, C-terminal CLH39_12560 IPR000014 PAS domain CLH39_12560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_12560 IPR005467 Histidine kinase domain CLH39_12560 IPR001610 PAC motif CLH39_12560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_12560 IPR035965 PAS domain superfamily CLH39_12570 IPR002823 Protein of unknown function DUF112, transmembrane CLH39_12575 IPR006674 HD domain CLH39_12575 IPR003607 HD/PDEase domain CLH39_12580 IPR036259 MFS transporter superfamily CLH39_12580 IPR011701 Major facilitator superfamily CLH39_12580 IPR005829 Sugar transporter, conserved site CLH39_12580 IPR020846 Major facilitator superfamily domain CLH39_12580 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CLH39_12585 IPR011701 Major facilitator superfamily CLH39_12585 IPR004638 Drug resistance transporter EmrB-like CLH39_12585 IPR036259 MFS transporter superfamily CLH39_12585 IPR005829 Sugar transporter, conserved site CLH39_12585 IPR020846 Major facilitator superfamily domain CLH39_12590 IPR005119 LysR, substrate-binding CLH39_12590 IPR000847 Transcription regulator HTH, LysR CLH39_12590 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12590 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12595 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CLH39_12595 IPR026660 Phosphoribosyl-AMP cyclohydrolase CLH39_12595 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CLH39_12600 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12600 IPR002481 Ferric-uptake regulator CLH39_12600 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12605 IPR004722 Dihydroorotase CLH39_12605 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_12605 IPR032466 Metal-dependent hydrolase CLH39_12605 IPR006680 Amidohydrolase-related CLH39_12605 IPR002195 Dihydroorotase, conserved site CLH39_12615 IPR002696 Putative membrane protein insertion efficiency factor CLH39_12620 IPR022838 GTP cyclohydrolase FolE2 CLH39_12620 IPR003801 GTP cyclohydrolase FolE2/MptA CLH39_12625 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLH39_12625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12625 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLH39_12630 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12630 IPR001034 DeoR-type HTH domain CLH39_12630 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12630 IPR013196 Helix-turn-helix, type 11 CLH39_12630 IPR028349 Protein PafC CLH39_12630 IPR026881 WYL domain CLH39_12640 IPR034184 Putative acyl-CoA dehydrogenase AidB CLH39_12640 IPR041504 Adaptive response protein AidB, N-terminal CLH39_12640 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_12640 IPR006089 Acyl-CoA dehydrogenase, conserved site CLH39_12640 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_12640 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_12640 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_12650 IPR038071 UROD/MetE-like superfamily CLH39_12650 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CLH39_12660 IPR038071 UROD/MetE-like superfamily CLH39_12660 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CLH39_12660 IPR006276 Cobalamin-independent methionine synthase CLH39_12660 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CLH39_12665 IPR005119 LysR, substrate-binding CLH39_12665 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CLH39_12665 IPR000847 Transcription regulator HTH, LysR CLH39_12665 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12665 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12670 IPR001207 Transposase, mutator type CLH39_12675 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_12675 IPR010917 TonB-dependent receptor, conserved site CLH39_12675 IPR011662 Secretin/TonB, short N-terminal domain CLH39_12675 IPR039423 TonB-dependent receptor-like CLH39_12675 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_12675 IPR012910 TonB-dependent receptor, plug domain CLH39_12675 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_12675 IPR010105 TonB-dependent siderophore receptor CLH39_12695 IPR004739 GMP synthase, glutamine amidotransferase CLH39_12695 IPR001674 GMP synthase, C-terminal CLH39_12695 IPR029062 Class I glutamine amidotransferase-like CLH39_12695 IPR017926 Glutamine amidotransferase CLH39_12695 IPR025777 GMP synthetase ATP pyrophosphatase domain CLH39_12695 IPR022955 GMP synthase CLH39_12695 IPR022310 NAD/GMP synthase CLH39_12695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_12715 IPR013785 Aldolase-type TIM barrel CLH39_12715 IPR000644 CBS domain CLH39_12715 IPR005990 Inosine-5'-monophosphate dehydrogenase CLH39_12715 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CLH39_12715 IPR001093 IMP dehydrogenase/GMP reductase CLH39_12720 IPR010073 Phosphoribosylformylglycinamidine synthase PurL CLH39_12720 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal CLH39_12720 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CLH39_12720 IPR017926 Glutamine amidotransferase CLH39_12720 IPR036921 PurM-like, N-terminal domain superfamily CLH39_12720 IPR036676 PurM-like, C-terminal domain superfamily CLH39_12720 IPR010918 PurM-like, C-terminal domain CLH39_12720 IPR029062 Class I glutamine amidotransferase-like CLH39_12720 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CLH39_12725 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLH39_12725 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLH39_12725 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CLH39_12725 IPR006358 Transcription elongation factor GreB CLH39_12725 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CLH39_12725 IPR023459 Transcription elongation factor GreA/GreB family CLH39_12725 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CLH39_12725 IPR028624 Transcription elongation factor GreA/GreB CLH39_12730 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLH39_12730 IPR004013 PHP domain CLH39_12730 IPR016195 Polymerase/histidinol phosphatase-like CLH39_12740 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLH39_12740 IPR004797 Competence protein ComEC/Rec2 CLH39_12740 IPR035681 ComA-like, MBL domain CLH39_12740 IPR004477 ComEC/Rec2-related protein CLH39_12740 IPR001279 Metallo-beta-lactamase CLH39_12745 IPR001130 TatD family CLH39_12745 IPR032466 Metal-dependent hydrolase CLH39_12745 IPR018228 Deoxyribonuclease, TatD-related, conserved site CLH39_12750 IPR017871 ABC transporter, conserved site CLH39_12750 IPR003593 AAA+ ATPase domain CLH39_12750 IPR015854 ABC transporter, lipoprotein release, LolD CLH39_12750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12750 IPR003439 ABC transporter-like CLH39_12755 IPR003838 ABC transporter permease protein domain CLH39_12755 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CLH39_12755 IPR025857 MacB-like periplasmic core domain CLH39_12765 IPR001667 DDH domain CLH39_12765 IPR038763 DHH phosphoesterase superfamily CLH39_12765 IPR003156 DHHA1 domain CLH39_12765 IPR004610 Bacterial RecJ exonuclease CLH39_12765 IPR041122 RecJ, OB domain CLH39_12785 IPR012334 Pectin lyase fold CLH39_12785 IPR011050 Pectin lyase fold/virulence factor CLH39_12785 IPR008638 Filamentous haemagglutinin, N-terminal CLH39_12785 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CLH39_12785 IPR024973 ESPR domain CLH39_12785 IPR006914 VENN motif-containing domain CLH39_12785 IPR025157 Hemagglutinin repeat CLH39_12790 IPR005565 Haemolysin activator HlyB, C-terminal CLH39_12790 IPR013686 Polypeptide-transport-associated, ShlB-type CLH39_12790 IPR034746 POTRA domain CLH39_12790 IPR035251 ShlB, POTRA domain CLH39_12790 IPR027282 Two partner secretion pathway transporter CLH39_12800 IPR038770 Sodium/solute symporter superfamily CLH39_12800 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 CLH39_12800 IPR004710 Bile acid:sodium symporter CLH39_12805 IPR000620 EamA domain CLH39_12810 IPR006196 RNA-binding domain, S1, IF1 type CLH39_12810 IPR012340 Nucleic acid-binding, OB-fold CLH39_12810 IPR004368 Translation initiation factor IF-1 CLH39_12815 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLH39_12815 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLH39_12815 IPR003660 HAMP domain CLH39_12815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_12815 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLH39_12815 IPR004090 Chemotaxis methyl-accepting receptor CLH39_12825 IPR036291 NAD(P)-binding domain superfamily CLH39_12825 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_12825 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_12830 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLH39_12830 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLH39_12830 IPR006195 Aminoacyl-tRNA synthetase, class II CLH39_12830 IPR012340 Nucleic acid-binding, OB-fold CLH39_12830 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CLH39_12830 IPR002313 Lysine-tRNA ligase, class II CLH39_12835 IPR042100 Bordetella uptake gene, domain 1 CLH39_12835 IPR005064 Bordetella uptake gene CLH39_12840 IPR004363 Methylglyoxal synthase CLH39_12840 IPR011607 Methylglyoxal synthase-like domain CLH39_12840 IPR036914 Methylglyoxal synthase-like domain superfamily CLH39_12845 IPR011302 Iron-binding protein IscA, proteobacteria CLH39_12845 IPR035903 HesB-like domain superfamily CLH39_12845 IPR017870 FeS cluster insertion, C-terminal, conserved site CLH39_12845 IPR016092 FeS cluster insertion protein CLH39_12845 IPR000361 FeS cluster biogenesis CLH39_12850 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CLH39_12850 IPR011339 ISC system FeS cluster assembly, IscU scaffold CLH39_12855 IPR010240 Cysteine desulfurase IscS CLH39_12855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_12855 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_12855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_12855 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CLH39_12855 IPR000192 Aminotransferase class V domain CLH39_12855 IPR016454 Cysteine desulfurase CLH39_12860 IPR010242 Transcription factor HTH, IscR CLH39_12860 IPR000944 Transcription regulator Rrf2-type CLH39_12860 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12860 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12860 IPR030489 Transcription regulator Rrf2-type, conserved site CLH39_12865 IPR036196 Phosphotyrosine protein phosphatase I superfamily CLH39_12865 IPR023485 Phosphotyrosine protein phosphatase I CLH39_12865 IPR017867 Protein-tyrosine phosphatase, low molecular weight CLH39_12870 IPR004807 UvrABC system, subunit B CLH39_12870 IPR001650 Helicase, C-terminal CLH39_12870 IPR036876 UVR domain superfamily CLH39_12870 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_12870 IPR024759 UvrB, YAD/RRR-motif-containing domain CLH39_12870 IPR001943 UVR domain CLH39_12870 IPR006935 Helicase/UvrB, N-terminal CLH39_12870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12870 IPR041471 UvrB, interaction domain CLH39_12875 IPR000796 Aspartate/other aminotransferase CLH39_12875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_12875 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_12875 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLH39_12875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_12875 IPR004839 Aminotransferase, class I/classII CLH39_12880 IPR000182 GNAT domain CLH39_12880 IPR016181 Acyl-CoA N-acyltransferase CLH39_12885 IPR036390 Winged helix DNA-binding domain superfamily CLH39_12885 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_12885 IPR006199 LexA repressor, DNA-binding domain CLH39_12885 IPR015927 Peptidase S24/S26A/S26B/S26C CLH39_12885 IPR006197 Peptidase S24, LexA-like CLH39_12885 IPR006200 Transcription regulator LexA CLH39_12885 IPR036286 LexA/Signal peptidase-like superfamily CLH39_12885 IPR039418 LexA-like CLH39_12890 IPR008269 Peptidase S16, Lon proteolytic domain CLH39_12890 IPR027065 Lon protease CLH39_12890 IPR003593 AAA+ ATPase domain CLH39_12890 IPR008268 Peptidase S16, active site CLH39_12890 IPR015947 PUA-like superfamily CLH39_12890 IPR027543 Lon protease, bacterial CLH39_12890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12890 IPR004815 Lon protease, bacterial/eukaryotic-type CLH39_12890 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_12890 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_12890 IPR003111 Lon, substrate-binding domain CLH39_12890 IPR003959 ATPase, AAA-type, core CLH39_12895 IPR019489 Clp ATPase, C-terminal CLH39_12895 IPR004487 Clp protease, ATP-binding subunit ClpX CLH39_12895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_12895 IPR003593 AAA+ ATPase domain CLH39_12895 IPR010603 Zinc finger, ClpX C4-type CLH39_12895 IPR038366 Zinc finger, ClpX C4-type superfamily CLH39_12895 IPR003959 ATPase, AAA-type, core CLH39_12900 IPR001907 ATP-dependent Clp protease proteolytic subunit CLH39_12900 IPR033135 ClpP, histidine active site CLH39_12900 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLH39_12900 IPR029045 ClpP/crotonase-like domain superfamily CLH39_12905 IPR027304 Trigger factor/SurA domain superfamily CLH39_12905 IPR008880 Trigger factor, C-terminal CLH39_12905 IPR005215 Trigger factor CLH39_12905 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CLH39_12905 IPR036611 Trigger factor ribosome-binding domain superfamily CLH39_12905 IPR008881 Trigger factor, ribosome-binding, bacterial CLH39_12905 IPR037041 Trigger factor, C-terminal domain superfamily CLH39_12910 IPR023606 CoA-transferase family III domain superfamily CLH39_12910 IPR003673 CoA-transferase family III CLH39_12920 IPR011701 Major facilitator superfamily CLH39_12920 IPR020846 Major facilitator superfamily domain CLH39_12920 IPR036259 MFS transporter superfamily CLH39_12925 IPR010211 Redox-sensitive transcriptional activator SoxR CLH39_12925 IPR000551 MerR-type HTH domain CLH39_12925 IPR009061 Putative DNA-binding domain superfamily CLH39_12925 IPR015358 Transcription regulator MerR, DNA binding CLH39_12965 IPR006037 Regulator of K+ conductance, C-terminal CLH39_12965 IPR031312 Sodium/sulphate symporter, conserved site CLH39_12965 IPR004680 Citrate transporter-like domain CLH39_12965 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CLH39_12975 IPR003313 AraC-type arabinose-binding/dimerisation domain CLH39_12975 IPR014710 RmlC-like jelly roll fold CLH39_12975 IPR009057 Homeobox-like domain superfamily CLH39_12975 IPR018060 DNA binding HTH domain, AraC-type CLH39_12975 IPR011051 RmlC-like cupin domain superfamily CLH39_12975 IPR018062 HTH domain AraC-type, conserved site CLH39_12990 IPR011004 Trimeric LpxA-like superfamily CLH39_12990 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CLH39_12990 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CLH39_12990 IPR018357 Hexapeptide transferase, conserved site CLH39_12990 IPR001451 Hexapeptide repeat CLH39_12990 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CLH39_12995 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_12995 IPR002933 Peptidase M20 CLH39_12995 IPR011650 Peptidase M20, dimerisation domain CLH39_12995 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CLH39_13000 IPR007848 Methyltransferase small domain CLH39_13000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_13000 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLH39_13000 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CLH39_13000 IPR004556 Methyltransferase HemK-like CLH39_13005 IPR003593 AAA+ ATPase domain CLH39_13005 IPR032781 ABC-transporter extension domain CLH39_13005 IPR017871 ABC transporter, conserved site CLH39_13005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13005 IPR003439 ABC transporter-like CLH39_13015 IPR037541 Uncharacterized MFS-type transporter YfcJ CLH39_13015 IPR036259 MFS transporter superfamily CLH39_13015 IPR020846 Major facilitator superfamily domain CLH39_13015 IPR011701 Major facilitator superfamily CLH39_13030 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CLH39_13035 IPR001647 DNA-binding HTH domain, TetR-type CLH39_13035 IPR009057 Homeobox-like domain superfamily CLH39_13035 IPR003012 Tetracycline transcriptional regulator, TetR CLH39_13035 IPR004111 Tetracycline repressor TetR, C-terminal CLH39_13035 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLH39_13035 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLH39_13060 IPR014016 UvrD-like helicase, ATP-binding domain CLH39_13060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13060 IPR005753 DNA helicase, ATP-dependent, UvrD type CLH39_13060 IPR034739 UvrD/AddA helicase, N-terminal CLH39_13060 IPR013986 DExx box DNA helicase domain superfamily CLH39_13060 IPR014017 UvrD-like DNA helicase, C-terminal CLH39_13060 IPR000212 DNA helicase, UvrD/REP type CLH39_13070 IPR004573 rRNA small subunit methyltransferase B CLH39_13070 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CLH39_13070 IPR006027 NusB/RsmB/TIM44 CLH39_13070 IPR035926 NusB-like superfamily CLH39_13070 IPR023267 RNA (C5-cytosine) methyltransferase CLH39_13070 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CLH39_13070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_13075 IPR036477 Formyl transferase, N-terminal domain superfamily CLH39_13075 IPR002376 Formyl transferase, N-terminal CLH39_13075 IPR004607 Phosphoribosylglycinamide formyltransferase CLH39_13075 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CLH39_13080 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CLH39_13080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_13080 IPR023465 Riboflavin kinase domain superfamily CLH39_13080 IPR015864 FAD synthetase CLH39_13080 IPR023468 Riboflavin kinase CLH39_13080 IPR002606 Riboflavin kinase, bacterial CLH39_13085 IPR010663 Zinc finger, FPG/IleRS-type CLH39_13085 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLH39_13085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_13085 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLH39_13085 IPR023585 Isoleucine-tRNA ligase, type 1 CLH39_13085 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLH39_13085 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_13085 IPR002301 Isoleucine-tRNA ligase CLH39_13085 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLH39_13085 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CLH39_13090 IPR001872 Peptidase A8, signal peptidase II CLH39_13095 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CLH39_13095 IPR036551 Flavin prenyltransferase-like CLH39_13095 IPR003382 Flavoprotein CLH39_13095 IPR035929 CoaB-like superfamily CLH39_13095 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CLH39_13100 IPR029054 dUTPase-like CLH39_13100 IPR033704 dUTPase, trimeric CLH39_13100 IPR036157 dUTPase-like superfamily CLH39_13100 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CLH39_13105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_13105 IPR010286 METTL16/RlmF family CLH39_13105 IPR016909 Ribosomal RNA large subunit methyltransferase F CLH39_13115 IPR036291 NAD(P)-binding domain superfamily CLH39_13115 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_13115 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13135 IPR017871 ABC transporter, conserved site CLH39_13135 IPR003439 ABC transporter-like CLH39_13135 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_13135 IPR003593 AAA+ ATPase domain CLH39_13140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13140 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_13140 IPR017871 ABC transporter, conserved site CLH39_13140 IPR003439 ABC transporter-like CLH39_13140 IPR003593 AAA+ ATPase domain CLH39_13145 IPR001851 ABC transporter, permease CLH39_13145 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CLH39_13150 IPR001851 ABC transporter, permease CLH39_13155 IPR000709 Leu/Ile/Val-binding protein CLH39_13155 IPR028082 Periplasmic binding protein-like I CLH39_13155 IPR028081 Leucine-binding protein domain CLH39_13160 IPR002872 Proline dehydrogenase domain CLH39_13160 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CLH39_13160 IPR024089 Proline dehydrogenase PutA, domain I/II CLH39_13160 IPR015590 Aldehyde dehydrogenase domain CLH39_13160 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_13160 IPR024090 Proline dehydrogenase PutA, domain I CLH39_13160 IPR010985 Ribbon-helix-helix CLH39_13160 IPR025703 Bifunctional protein PutA CLH39_13160 IPR013321 Arc-type ribbon-helix-helix CLH39_13160 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CLH39_13160 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_13160 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_13160 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_13160 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_13160 IPR029041 FAD-linked oxidoreductase-like CLH39_13160 IPR024082 Proline dehydrogenase PutA, domain II CLH39_13170 IPR003399 Mce/MlaD CLH39_13175 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CLH39_13175 IPR007498 Intermembrane transport protein PqiA-like CLH39_13180 IPR003593 AAA+ ATPase domain CLH39_13180 IPR003959 ATPase, AAA-type, core CLH39_13180 IPR041546 ClpA/ClpB, AAA lid domain CLH39_13180 IPR028299 ClpA/B, conserved site 2 CLH39_13180 IPR018368 ClpA/B, conserved site 1 CLH39_13180 IPR001270 ClpA/B family CLH39_13180 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CLH39_13180 IPR036628 Clp, N-terminal domain superfamily CLH39_13180 IPR004176 Clp, N-terminal CLH39_13180 IPR019489 Clp ATPase, C-terminal CLH39_13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13185 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CLH39_13185 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLH39_13185 IPR003769 Adaptor protein ClpS, core CLH39_13190 IPR002059 Cold-shock protein, DNA-binding CLH39_13190 IPR012340 Nucleic acid-binding, OB-fold CLH39_13190 IPR019844 Cold-shock (CSD) domain CLH39_13190 IPR011129 Cold shock domain CLH39_13190 IPR012156 Cold shock, CspA CLH39_13200 IPR020613 Thiolase, conserved site CLH39_13200 IPR020616 Thiolase, N-terminal CLH39_13200 IPR012793 Beta-ketoadipyl CoA thiolase CLH39_13200 IPR002155 Thiolase CLH39_13200 IPR020610 Thiolase, active site CLH39_13200 IPR016039 Thiolase-like CLH39_13200 IPR020617 Thiolase, C-terminal CLH39_13200 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_13205 IPR001011 Acid phosphatase, class A, bacterial CLH39_13205 IPR018296 Acid phosphatase, class A, bacterial, conserved site CLH39_13205 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CLH39_13205 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLH39_13210 IPR002024 Bacterioferritin CLH39_13210 IPR012347 Ferritin-like CLH39_13210 IPR009040 Ferritin-like diiron domain CLH39_13210 IPR009078 Ferritin-like superfamily CLH39_13210 IPR008331 Ferritin/DPS protein domain CLH39_13215 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLH39_13215 IPR019833 Manganese/iron superoxide dismutase, binding site CLH39_13215 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLH39_13215 IPR001189 Manganese/iron superoxide dismutase CLH39_13215 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CLH39_13215 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CLH39_13220 IPR003753 Exonuclease VII, large subunit CLH39_13220 IPR025824 OB-fold nucleic acid binding domain CLH39_13220 IPR020579 Exonuclease VII, large subunit, C-terminal CLH39_13225 IPR002898 MotA/TolQ/ExbB proton channel CLH39_13230 IPR003400 Biopolymer transport protein ExbD/TolR CLH39_13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13235 IPR003758 Tetraacyldisaccharide 4'-kinase CLH39_13240 IPR005651 Trm112-like CLH39_13245 IPR003329 Acylneuraminate cytidylyltransferase CLH39_13245 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CLH39_13245 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_13250 IPR006259 Adenylate kinase subfamily CLH39_13250 IPR007862 Adenylate kinase, active site lid domain CLH39_13250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13250 IPR000850 Adenylate kinase/UMP-CMP kinase CLH39_13250 IPR033690 Adenylate kinase, conserved site CLH39_13255 IPR036291 NAD(P)-binding domain superfamily CLH39_13255 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_13255 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_13260 IPR004268 Peptidoglycan biosynthesis protein MurJ CLH39_13265 IPR036510 Ribosomal protein S20 superfamily CLH39_13265 IPR002583 Ribosomal protein S20 CLH39_13270 IPR036291 NAD(P)-binding domain superfamily CLH39_13270 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLH39_13270 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLH39_13280 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CLH39_13280 IPR006130 Aspartate/ornithine carbamoyltransferase CLH39_13280 IPR002292 Ornithine/putrescine carbamoyltransferase CLH39_13280 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLH39_13280 IPR024904 Ornithine carbamoyltransferase CLH39_13280 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLH39_13285 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_13285 IPR011006 CheY-like superfamily CLH39_13285 IPR039420 Transcriptional regulatory protein WalR-like CLH39_13285 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_13285 IPR001789 Signal transduction response regulator, receiver domain CLH39_13290 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_13290 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_13290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_13290 IPR003018 GAF domain CLH39_13290 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CLH39_13290 IPR005467 Histidine kinase domain CLH39_13290 IPR025201 Sensor protein KdpD, transmembrane domain CLH39_13290 IPR038318 KdpD, transmembrane domain superfamily CLH39_13290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_13290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_13290 IPR029016 GAF-like domain superfamily CLH39_13300 IPR003820 Potassium-transporting ATPase C chain CLH39_13305 IPR004623 Potassium-transporting ATPase A chain CLH39_13315 IPR029062 Class I glutamine amidotransferase-like CLH39_13315 IPR017926 Glutamine amidotransferase CLH39_13315 IPR001674 GMP synthase, C-terminal CLH39_13315 IPR004739 GMP synthase, glutamine amidotransferase CLH39_13315 IPR025777 GMP synthetase ATP pyrophosphatase domain CLH39_13315 IPR022310 NAD/GMP synthase CLH39_13315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_13315 IPR022955 GMP synthase CLH39_13320 IPR028082 Periplasmic binding protein-like I CLH39_13320 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_13320 IPR000843 LacI-type HTH domain CLH39_13320 IPR006377 Catabolite control protein A CLH39_13325 IPR006059 Bacterial extracellular solute-binding protein CLH39_13325 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter CLH39_13335 IPR006469 NifC-like ABC-type porter CLH39_13335 IPR011867 Molybdate ABC transporter, permease protein CLH39_13335 IPR035906 MetI-like superfamily CLH39_13335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_13340 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CLH39_13340 IPR003593 AAA+ ATPase domain CLH39_13340 IPR003439 ABC transporter-like CLH39_13340 IPR017871 ABC transporter, conserved site CLH39_13340 IPR005666 Sulphate transport system permease protein 1 CLH39_13340 IPR024765 TOBE-like domain CLH39_13340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_13340 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_13345 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CLH39_13345 IPR042283 GpdQ, catalytic alpha/beta sandwich domain CLH39_13345 IPR042281 GpdQ, beta-strand dimerisation domain CLH39_13345 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLH39_13350 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CLH39_13350 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CLH39_13350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_13350 IPR001518 Argininosuccinate synthase CLH39_13350 IPR023437 Argininosuccinate synthase, type 2 subfamily CLH39_13350 IPR018223 Argininosuccinate synthase, conserved site CLH39_13360 IPR007401 Protein of unknown function DUF454 CLH39_13365 IPR015797 NUDIX hydrolase-like domain superfamily CLH39_13365 IPR020084 NUDIX hydrolase, conserved site CLH39_13365 IPR000086 NUDIX hydrolase domain CLH39_13365 IPR003561 Mutator MutT CLH39_13365 IPR020476 NUDIX hydrolase CLH39_13375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_13375 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_13375 IPR006233 Cystathionine beta-lyase, bacterial CLH39_13375 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLH39_13375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_13380 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLH39_13380 IPR036390 Winged helix DNA-binding domain superfamily CLH39_13380 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_13380 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLH39_13380 IPR011991 ArsR-like helix-turn-helix domain CLH39_13380 IPR000485 AsnC-type HTH domain CLH39_13380 IPR011008 Dimeric alpha-beta barrel CLH39_13380 IPR019888 Transcription regulator AsnC-type CLH39_13395 IPR000160 GGDEF domain CLH39_13395 IPR029787 Nucleotide cyclase CLH39_13445 IPR023346 Lysozyme-like domain superfamily CLH39_13445 IPR002196 Glycoside hydrolase, family 24 CLH39_13445 IPR034690 Endolysin T4 type CLH39_13535 IPR015927 Peptidase S24/S26A/S26B/S26C CLH39_13535 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_13535 IPR006200 Transcription regulator LexA CLH39_13535 IPR036390 Winged helix DNA-binding domain superfamily CLH39_13535 IPR036286 LexA/Signal peptidase-like superfamily CLH39_13535 IPR039418 LexA-like CLH39_13535 IPR006197 Peptidase S24, LexA-like CLH39_13535 IPR006199 LexA repressor, DNA-binding domain CLH39_13545 IPR036165 YefM-like superfamily CLH39_13545 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CLH39_13550 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CLH39_13550 IPR009614 Toxin YoeB CLH39_13575 IPR001915 Peptidase M48 CLH39_13580 IPR032710 NTF2-like domain superfamily CLH39_13580 IPR023006 Uncharacterised protein family UPF0225 CLH39_13585 IPR000182 GNAT domain CLH39_13585 IPR016181 Acyl-CoA N-acyltransferase CLH39_13595 IPR000390 Small multidrug resistance protein family CLH39_13600 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CLH39_13600 IPR003732 D-aminoacyl-tRNA deacylase DTD CLH39_13615 IPR006667 SLC41 divalent cation transporters, integral membrane domain CLH39_13615 IPR006669 Magnesium transporter MgtE CLH39_13615 IPR038048 Magnesium transporter MgtE, transmembrane domain CLH39_13615 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CLH39_13615 IPR038076 MgtE, N-terminal domain superfamily CLH39_13615 IPR000644 CBS domain CLH39_13615 IPR006668 Magnesium transporter, MgtE intracellular domain CLH39_13620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_13620 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_13620 IPR001789 Signal transduction response regulator, receiver domain CLH39_13620 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLH39_13620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_13620 IPR036641 HPT domain superfamily CLH39_13620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_13620 IPR011006 CheY-like superfamily CLH39_13620 IPR005467 Histidine kinase domain CLH39_13620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_13625 IPR001789 Signal transduction response regulator, receiver domain CLH39_13625 IPR003607 HD/PDEase domain CLH39_13625 IPR011006 CheY-like superfamily CLH39_13625 IPR037522 HD-GYP domain CLH39_13630 IPR001387 Cro/C1-type helix-turn-helix domain CLH39_13630 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_13645 IPR020846 Major facilitator superfamily domain CLH39_13645 IPR036292 Proline/betaine transporter ProP, C-terminal CLH39_13645 IPR005828 Major facilitator, sugar transporter-like CLH39_13645 IPR036259 MFS transporter superfamily CLH39_13645 IPR004736 MFS transporter, metabolite:H symporter CLH39_13645 IPR005829 Sugar transporter, conserved site CLH39_13645 IPR015041 Osmosensory transporter coiled coil CLH39_13650 IPR006686 Mechanosensitive ion channel MscS, conserved site CLH39_13650 IPR024393 Mechanosensitive ion channel MscS, porin domain CLH39_13650 IPR010920 LSM domain superfamily CLH39_13650 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CLH39_13650 IPR023408 Mechanosensitive ion channel MscS domain superfamily CLH39_13650 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLH39_13650 IPR023298 P-type ATPase, transmembrane domain superfamily CLH39_13650 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLH39_13650 IPR006685 Mechanosensitive ion channel MscS CLH39_13660 IPR024393 Mechanosensitive ion channel MscS, porin domain CLH39_13660 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CLH39_13660 IPR023408 Mechanosensitive ion channel MscS domain superfamily CLH39_13660 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLH39_13660 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLH39_13660 IPR006686 Mechanosensitive ion channel MscS, conserved site CLH39_13660 IPR006685 Mechanosensitive ion channel MscS CLH39_13660 IPR010920 LSM domain superfamily CLH39_13665 IPR002937 Amine oxidase CLH39_13665 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_13665 IPR014105 Carotenoid/retinoid oxidoreductase CLH39_13665 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site CLH39_13670 IPR036291 NAD(P)-binding domain superfamily CLH39_13670 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_13680 IPR032710 NTF2-like domain superfamily CLH39_13680 IPR000391 Ring-hydroxylating dioxygenase beta subunit CLH39_13680 IPR017641 Benzoate 1,2-dioxygenase, small subunit CLH39_13685 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CLH39_13685 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLH39_13685 IPR017639 Benzoate 1,2-dioxygenase, large subunit CLH39_13685 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CLH39_13685 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CLH39_13685 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CLH39_13700 IPR007400 PrpF protein CLH39_13710 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CLH39_13710 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLH39_13710 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLH39_13710 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLH39_13710 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CLH39_13710 IPR036008 Aconitase, iron-sulfur domain CLH39_13710 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLH39_13715 IPR008135 Competence-induced protein CinA CLH39_13715 IPR041424 CinA, KH domain CLH39_13715 IPR036425 MoaB/Mog-like domain superfamily CLH39_13715 IPR008136 CinA, C-terminal CLH39_13715 IPR001453 MoaB/Mog domain CLH39_13715 IPR036653 CinA-like, C-terminal CLH39_13720 IPR036390 Winged helix DNA-binding domain superfamily CLH39_13720 IPR000835 MarR-type HTH domain CLH39_13720 IPR023187 Transcriptional regulator MarR-type, conserved site CLH39_13720 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_13730 IPR013785 Aldolase-type TIM barrel CLH39_13730 IPR024188 Glutamate synthase large subunit-like protein CLH39_13730 IPR027283 Glutamate synthase large subunit-like protein, bacteria CLH39_13730 IPR002932 Glutamate synthase domain CLH39_13740 IPR036249 Thioredoxin-like superfamily CLH39_13740 IPR003782 Copper chaperone SCO1/SenC CLH39_13755 IPR036412 HAD-like superfamily CLH39_13755 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CLH39_13755 IPR023214 HAD superfamily CLH39_13760 IPR006043 Xanthine/uracil/vitamin C permease CLH39_13765 IPR010019 Integral membrane protein, YccS CLH39_13765 IPR010020 Integral membrane protein, YccS/YhfK CLH39_13765 IPR032692 Integral membrane protein YccS, N-terminal CLH39_13770 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLH39_13770 IPR005694 Efflux pump membrane protein CLH39_13770 IPR030196 Multidrug resistance protein MdtN CLH39_13780 IPR006153 Cation/H+ exchanger CLH39_13780 IPR018422 Cation/H+ exchanger, CPA1 family CLH39_13780 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CLH39_13780 IPR038770 Sodium/solute symporter superfamily CLH39_13790 IPR002771 Multiple antibiotic resistance (MarC)-related CLH39_13815 IPR010105 TonB-dependent siderophore receptor CLH39_13815 IPR039423 TonB-dependent receptor-like CLH39_13815 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_13815 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_13815 IPR010916 TonB box, conserved site CLH39_13815 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_13815 IPR012910 TonB-dependent receptor, plug domain CLH39_13820 IPR029052 Metallo-dependent phosphatase-like CLH39_13820 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLH39_13820 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase CLH39_13830 IPR009056 Cytochrome c-like domain CLH39_13830 IPR036909 Cytochrome c-like domain superfamily CLH39_13835 IPR024167 Cytochrome c4-like CLH39_13835 IPR009056 Cytochrome c-like domain CLH39_13835 IPR036909 Cytochrome c-like domain superfamily CLH39_13845 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLH39_13845 IPR000883 Cytochrome c oxidase subunit I CLH39_13845 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLH39_13845 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CLH39_13845 IPR023616 Cytochrome c oxidase-like, subunit I domain CLH39_13850 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_13850 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_13850 IPR001789 Signal transduction response regulator, receiver domain CLH39_13850 IPR011006 CheY-like superfamily CLH39_13850 IPR039420 Transcriptional regulatory protein WalR-like CLH39_13850 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_13855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_13855 IPR005467 Histidine kinase domain CLH39_13855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_13855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_13855 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_13855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_13855 IPR013727 Two-component sensor kinase, N-terminal CLH39_13860 IPR002059 Cold-shock protein, DNA-binding CLH39_13860 IPR012156 Cold shock, CspA CLH39_13860 IPR011129 Cold shock domain CLH39_13860 IPR019844 Cold-shock (CSD) domain CLH39_13860 IPR012340 Nucleic acid-binding, OB-fold CLH39_13880 IPR009056 Cytochrome c-like domain CLH39_13880 IPR036909 Cytochrome c-like domain superfamily CLH39_13885 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_13885 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily CLH39_13885 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CLH39_13885 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLH39_13885 IPR023753 FAD/NAD(P)-binding domain CLH39_13885 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_13885 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding CLH39_13925 IPR023271 Aquaporin-like CLH39_13925 IPR034294 Aquaporin transporter CLH39_13925 IPR023743 Aquaporin Z CLH39_13925 IPR000425 Major intrinsic protein CLH39_13925 IPR022357 Major intrinsic protein, conserved site CLH39_13930 IPR009739 Lysozyme inhibitor LprI, N-terminal CLH39_13955 IPR004841 Amino acid permease/ SLC12A domain CLH39_13955 IPR004840 Amino acid permease, conserved site CLH39_13965 IPR004681 TRAP transporter large membrane protein DctM CLH39_13965 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_13975 IPR022394 Methylamine utilisation protein, MauG CLH39_13975 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CLH39_13975 IPR004852 Di-haem cytochrome c peroxidase CLH39_13975 IPR036909 Cytochrome c-like domain superfamily CLH39_13975 IPR009056 Cytochrome c-like domain CLH39_13980 IPR012910 TonB-dependent receptor, plug domain CLH39_13980 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_13980 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_13995 IPR013988 PhnA protein, C-terminal CLH39_13995 IPR013987 PhnA protein, N-terminal CLH39_13995 IPR004624 PhnA protein CLH39_14005 IPR000847 Transcription regulator HTH, LysR CLH39_14005 IPR005119 LysR, substrate-binding CLH39_14005 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_14005 IPR036390 Winged helix DNA-binding domain superfamily CLH39_14010 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_14010 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_14010 IPR036291 NAD(P)-binding domain superfamily CLH39_14010 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_14015 IPR035906 MetI-like superfamily CLH39_14015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_14020 IPR015859 ABC transporter, taurine import, TauD CLH39_14020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14020 IPR003593 AAA+ ATPase domain CLH39_14020 IPR017871 ABC transporter, conserved site CLH39_14020 IPR003439 ABC transporter-like CLH39_14025 IPR010068 Taurine ABC transporter, substrate-binding protein TauA CLH39_14025 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_14025 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CLH39_14030 IPR001387 Cro/C1-type helix-turn-helix domain CLH39_14030 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_14030 IPR014057 Uncharacterized protein HI1420 CLH39_14060 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLH39_14060 IPR002104 Integrase, catalytic domain CLH39_14060 IPR013762 Integrase-like, catalytic domain superfamily CLH39_14060 IPR010998 Integrase/recombinase, N-terminal CLH39_14070 IPR003474 Gluconate transporter CLH39_14080 IPR036884 [2Fe-2S]-binding domain superfamily CLH39_14080 IPR002888 [2Fe-2S]-binding CLH39_14080 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_14080 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_14080 IPR012675 Beta-grasp domain superfamily CLH39_14080 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_14090 IPR042100 Bordetella uptake gene, domain 1 CLH39_14090 IPR005064 Bordetella uptake gene CLH39_14095 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CLH39_14095 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CLH39_14095 IPR013785 Aldolase-type TIM barrel CLH39_14095 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CLH39_14095 IPR004393 Nicotinate-nucleotide pyrophosphorylase CLH39_14095 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CLH39_14095 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CLH39_14105 IPR004090 Chemotaxis methyl-accepting receptor CLH39_14105 IPR003660 HAMP domain CLH39_14105 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_14105 IPR001610 PAC motif CLH39_14105 IPR000014 PAS domain CLH39_14105 IPR035965 PAS domain superfamily CLH39_14105 IPR013655 PAS fold-3 CLH39_14115 IPR003660 HAMP domain CLH39_14115 IPR013655 PAS fold-3 CLH39_14115 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_14115 IPR001610 PAC motif CLH39_14115 IPR000014 PAS domain CLH39_14115 IPR004090 Chemotaxis methyl-accepting receptor CLH39_14115 IPR035965 PAS domain superfamily CLH39_14120 IPR007383 Protein of unknown function DUF445 CLH39_14140 IPR042095 Sulfatase-modifying factor enzyme superfamily CLH39_14140 IPR016187 C-type lectin fold CLH39_14140 IPR005532 Sulfatase-modifying factor enzyme CLH39_14150 IPR011924 Lipoprotein releasing system, ATP-binding protein CLH39_14150 IPR017871 ABC transporter, conserved site CLH39_14150 IPR003439 ABC transporter-like CLH39_14150 IPR003593 AAA+ ATPase domain CLH39_14150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14150 IPR015854 ABC transporter, lipoprotein release, LolD CLH39_14185 IPR001029 Flagellin, D0/D1 domain CLH39_14185 IPR014981 Flagellin D3 CLH39_14185 IPR001492 Flagellin CLH39_14190 IPR013325 RNA polymerase sigma factor, region 2 CLH39_14190 IPR013324 RNA polymerase sigma factor, region 3/4-like CLH39_14190 IPR007630 RNA polymerase sigma-70 region 4 CLH39_14190 IPR007624 RNA polymerase sigma-70 region 3 CLH39_14190 IPR012845 RNA polymerase sigma factor, FliA/WhiG CLH39_14190 IPR007627 RNA polymerase sigma-70 region 2 CLH39_14190 IPR028617 RNA polymerase sigma factor FliA CLH39_14190 IPR014284 RNA polymerase sigma-70 like domain CLH39_14190 IPR000943 RNA polymerase sigma-70 CLH39_14195 IPR005186 FlaG protein CLH39_14195 IPR035924 FlaG-like superfamily CLH39_14200 IPR010809 Flagellar hook-associated protein 2, C-terminal CLH39_14200 IPR003481 Flagellar hook-associated protein 2, N-terminal CLH39_14200 IPR040026 Flagellar hook-associated protein 2 CLH39_14205 IPR036584 Flagellar protein FliS superfamily CLH39_14205 IPR003713 Flagellar protein FliS CLH39_14220 IPR029025 Type III secretion system substrate exporter, C-terminal CLH39_14220 IPR006136 Flagellar biosynthetic protein FlhB CLH39_14220 IPR006135 Type III secretion system substrate exporter CLH39_14225 IPR001624 Flagellar hook-basal body complex protein FliE CLH39_14230 IPR006182 Secretory protein YscJ/FliF CLH39_14230 IPR000067 Flagellar M-ring protein FliF CLH39_14230 IPR013556 Flagellar M-ring C-terminal CLH39_14235 IPR023087 Flagellar motor switch protein FliG, C-terminal CLH39_14235 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLH39_14235 IPR032779 Flagellar motor switch protein FliG, middle domain CLH39_14235 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CLH39_14235 IPR000090 Flagellar motor switch protein FliG CLH39_14245 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLH39_14245 IPR003593 AAA+ ATPase domain CLH39_14245 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLH39_14245 IPR040627 T3SS EscN ATPase, C-terminal CLH39_14245 IPR005714 ATPase, type III secretion system, FliI/YscN CLH39_14245 IPR032463 ATPase, type III secretion system, FliI CLH39_14245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14245 IPR020005 Flagellar export ATPase FliI, clade 1 CLH39_14260 IPR005503 Flagellar basal body-associated protein FliL CLH39_14265 IPR036429 SpoA-like superfamily CLH39_14265 IPR001543 Surface presentation of antigen (SpoA) CLH39_14265 IPR001689 Flagellar motor switch protein FliM CLH39_14265 IPR028976 CheC-like superfamily CLH39_14270 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CLH39_14270 IPR031576 Flagellar motor switch protein FliN, N-terminal CLH39_14270 IPR036429 SpoA-like superfamily CLH39_14270 IPR012826 Flagellar motor switch FliN CLH39_14270 IPR001543 Surface presentation of antigen (SpoA) CLH39_14275 IPR022781 Flagellar biosynthesis protein, FliO CLH39_14280 IPR005837 Flagellar transport protein FliP CLH39_14280 IPR005838 Type III secretion system inner membrane P protein CLH39_14285 IPR002191 Bacterial export protein family 3 CLH39_14285 IPR006305 Flagellar biosynthesis protein FliQ CLH39_14290 IPR006303 Flagellar biosynthesis protein FliR CLH39_14290 IPR002010 Type III secretion system inner membrane R protein CLH39_14295 IPR036397 Ribonuclease H superfamily CLH39_14295 IPR012337 Ribonuclease H-like superfamily CLH39_14295 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type CLH39_14295 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLH39_14295 IPR004013 PHP domain CLH39_14295 IPR013520 Exonuclease, RNase T/DNA polymerase III CLH39_14295 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CLH39_14295 IPR029460 DNA polymerase, helix-hairpin-helix motif CLH39_14295 IPR040982 DNA polymerase III alpha subunit finger domain CLH39_14295 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CLH39_14305 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLH39_14305 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLH39_14305 IPR004090 Chemotaxis methyl-accepting receptor CLH39_14305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_14305 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLH39_14305 IPR003660 HAMP domain CLH39_14315 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLH39_14315 IPR004090 Chemotaxis methyl-accepting receptor CLH39_14315 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLH39_14315 IPR003660 HAMP domain CLH39_14315 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLH39_14315 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_14320 IPR001029 Flagellin, D0/D1 domain CLH39_14320 IPR013384 Flagellar hook-associated protein 3 CLH39_14330 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLH39_14330 IPR013377 Peptidoglycan hydrolase FlgJ CLH39_14330 IPR019301 Flagellar protein FlgJ, N-terminal CLH39_14335 IPR001782 Flagellar P-ring protein CLH39_14340 IPR000527 Flagellar L-ring protein CLH39_14345 IPR019776 Flagellar basal body rod protein, conserved site CLH39_14345 IPR001444 Flagellar basal body rod protein, N-terminal CLH39_14345 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLH39_14345 IPR012834 Flagellar basal-body rod FlgG CLH39_14345 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLH39_14345 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLH39_14350 IPR019776 Flagellar basal body rod protein, conserved site CLH39_14350 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLH39_14350 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLH39_14350 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLH39_14350 IPR001444 Flagellar basal body rod protein, N-terminal CLH39_14355 IPR001444 Flagellar basal body rod protein, N-terminal CLH39_14355 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLH39_14355 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CLH39_14355 IPR019776 Flagellar basal body rod protein, conserved site CLH39_14355 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CLH39_14355 IPR037058 Flagellar hook protein FlgE superfamily CLH39_14355 IPR011491 Flagellar hook protein FlgE CLH39_14360 IPR025965 FlgD Ig-like domain CLH39_14360 IPR005648 Flagellar hook capping protein CLH39_14360 IPR025963 FlgD Tudor-like domain CLH39_14365 IPR019776 Flagellar basal body rod protein, conserved site CLH39_14365 IPR001444 Flagellar basal body rod protein, N-terminal CLH39_14365 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLH39_14365 IPR006299 Flagellar basal-body rod protein FlgC CLH39_14380 IPR007412 Anti-sigma-28 factor, FlgM CLH39_14380 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CLH39_14380 IPR035890 Anti-sigma-28 factor FlgM superfamily CLH39_14390 IPR003593 AAA+ ATPase domain CLH39_14390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14390 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLH39_14390 IPR020006 Flagellar biosynthesis protein FlhF CLH39_14395 IPR042196 FHIPEP, domain 4 CLH39_14395 IPR025505 FHIPEP conserved site CLH39_14395 IPR042194 FHIPEP, domain 1 CLH39_14395 IPR001712 Type III secretion system FHIPEP CLH39_14395 IPR042193 FHIPEP, domain 3 CLH39_14395 IPR006301 Flagellar biosynthesis protein FlhA CLH39_14400 IPR006135 Type III secretion system substrate exporter CLH39_14400 IPR006136 Flagellar biosynthetic protein FlhB CLH39_14400 IPR029025 Type III secretion system substrate exporter, C-terminal CLH39_14405 IPR007439 Chemotaxis phosphatase, CheZ CLH39_14410 IPR001789 Signal transduction response regulator, receiver domain CLH39_14410 IPR011006 CheY-like superfamily CLH39_14415 IPR001789 Signal transduction response regulator, receiver domain CLH39_14415 IPR011006 CheY-like superfamily CLH39_14415 IPR035909 Methylesterase CheB, C-terminal CLH39_14415 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CLH39_14415 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLH39_14420 IPR026024 Chemotaxis protein methyltransferase CheR CLH39_14420 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CLH39_14420 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLH39_14420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_14420 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CLH39_14420 IPR000780 MCP methyltransferase, CheR-type CLH39_14425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_14425 IPR004090 Chemotaxis methyl-accepting receptor CLH39_14425 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CLH39_14425 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CLH39_14425 IPR003660 HAMP domain CLH39_14425 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CLH39_14430 IPR002545 CheW-like domain CLH39_14430 IPR036061 CheW-like domain superfamily CLH39_14430 IPR039315 Chemotaxis protein CheW CLH39_14435 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLH39_14435 IPR036061 CheW-like domain superfamily CLH39_14435 IPR002545 CheW-like domain CLH39_14435 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CLH39_14435 IPR015162 CheY binding CLH39_14435 IPR036641 HPT domain superfamily CLH39_14435 IPR004105 Histidine kinase CheA-like, homodimeric domain CLH39_14435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_14435 IPR005467 Histidine kinase domain CLH39_14435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_14435 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_14435 IPR035891 CheY-binding domain of CheA CLH39_14435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_14440 IPR025713 Motility protein B, N-terminal domain CLH39_14440 IPR036737 OmpA-like domain superfamily CLH39_14440 IPR006665 OmpA-like domain CLH39_14445 IPR022522 Flagellar motor stator, MotA CLH39_14445 IPR002898 MotA/TolQ/ExbB proton channel CLH39_14445 IPR000540 Flagellar motor protein MotA, conserved site CLH39_14450 IPR007944 Flagellar transcriptional activator FlhC CLH39_14455 IPR023559 Flagellar transcriptional activator FlhD CLH39_14455 IPR036194 Flagellar transcriptional activator FlhD superfamily CLH39_14460 IPR038765 Papain-like cysteine peptidase superfamily CLH39_14460 IPR000064 Endopeptidase, NLPC/P60 domain CLH39_14465 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CLH39_14465 IPR006076 FAD dependent oxidoreductase CLH39_14465 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CLH39_14465 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_14465 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CLH39_14470 IPR018483 Carbohydrate kinase, FGGY, conserved site CLH39_14470 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLH39_14470 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLH39_14470 IPR005999 Glycerol kinase CLH39_14470 IPR000577 Carbohydrate kinase, FGGY CLH39_14475 IPR007829 TM2 domain CLH39_14480 IPR000917 Sulfatase, N-terminal CLH39_14480 IPR024607 Sulfatase, conserved site CLH39_14480 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLH39_14485 IPR016187 C-type lectin fold CLH39_14485 IPR005532 Sulfatase-modifying factor enzyme CLH39_14485 IPR042095 Sulfatase-modifying factor enzyme superfamily CLH39_14490 IPR001902 SLC26A/SulP transporter CLH39_14490 IPR036513 STAS domain superfamily CLH39_14490 IPR002645 STAS domain CLH39_14490 IPR011547 SLC26A/SulP transporter domain CLH39_14495 IPR001757 P-type ATPase CLH39_14495 IPR023299 P-type ATPase, cytoplasmic domain N CLH39_14495 IPR018303 P-type ATPase, phosphorylation site CLH39_14495 IPR027256 P-type ATPase, subfamily IB CLH39_14495 IPR036412 HAD-like superfamily CLH39_14495 IPR036163 Heavy metal-associated domain superfamily CLH39_14495 IPR023214 HAD superfamily CLH39_14495 IPR006121 Heavy metal-associated domain, HMA CLH39_14495 IPR023298 P-type ATPase, transmembrane domain superfamily CLH39_14495 IPR008250 P-type ATPase, A domain superfamily CLH39_14495 IPR017969 Heavy-metal-associated, conserved site CLH39_14500 IPR000551 MerR-type HTH domain CLH39_14500 IPR011794 Hg(II)-responsive transcriptional regulator CLH39_14500 IPR009061 Putative DNA-binding domain superfamily CLH39_14510 IPR007272 Sulphur transport domain CLH39_14515 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_14515 IPR011991 ArsR-like helix-turn-helix domain CLH39_14515 IPR036390 Winged helix DNA-binding domain superfamily CLH39_14515 IPR001845 HTH ArsR-type DNA-binding domain CLH39_14520 IPR001279 Metallo-beta-lactamase CLH39_14520 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CLH39_14525 IPR007360 Invasion gene expression up-regulator, SirB CLH39_14530 IPR018383 Uncharacterised protein family UPF0324, prokaryote CLH39_14535 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_14535 IPR036390 Winged helix DNA-binding domain superfamily CLH39_14535 IPR005119 LysR, substrate-binding CLH39_14535 IPR000847 Transcription regulator HTH, LysR CLH39_14555 IPR033900 Porin domain, Gram-negative type CLH39_14555 IPR001702 Porin, Gram-negative type CLH39_14555 IPR002299 Porin, Neisseria sp. type CLH39_14555 IPR023614 Porin domain superfamily CLH39_14570 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein CLH39_14570 IPR003841 Sodium-dependent phosphate transport protein CLH39_14575 IPR014227 Putative transport protein YtvI-like CLH39_14575 IPR002549 Transmembrane protein TqsA-like CLH39_14610 IPR006094 FAD linked oxidase, N-terminal CLH39_14610 IPR016164 FAD-linked oxidase-like, C-terminal CLH39_14610 IPR016166 FAD-binding domain, PCMH-type CLH39_14610 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_14610 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_14615 IPR006094 FAD linked oxidase, N-terminal CLH39_14615 IPR016164 FAD-linked oxidase-like, C-terminal CLH39_14615 IPR004113 FAD-linked oxidase, C-terminal CLH39_14615 IPR016166 FAD-binding domain, PCMH-type CLH39_14615 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_14615 IPR004490 Glycolate oxidase subunit GlcD CLH39_14615 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLH39_14620 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_14620 IPR036390 Winged helix DNA-binding domain superfamily CLH39_14620 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_14620 IPR000524 Transcription regulator HTH, GntR CLH39_14620 IPR011711 GntR, C-terminal CLH39_14625 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_14665 IPR003029 S1 domain CLH39_14665 IPR022967 RNA-binding domain, S1 CLH39_14665 IPR012340 Nucleic acid-binding, OB-fold CLH39_14665 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CLH39_14665 IPR004659 Ribonuclease E/G CLH39_14680 IPR011527 ABC transporter type 1, transmembrane domain CLH39_14680 IPR017871 ABC transporter, conserved site CLH39_14680 IPR003439 ABC transporter-like CLH39_14680 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_14680 IPR003593 AAA+ ATPase domain CLH39_14680 IPR011917 ABC transporter, lipid A export, MsbA CLH39_14680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14700 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLH39_14700 IPR001296 Glycosyl transferase, family 1 CLH39_14700 IPR017814 Mycothiol biosynthesis protein, MshA CLH39_14710 IPR001173 Glycosyltransferase 2-like CLH39_14710 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_14715 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLH39_14715 IPR002509 NodB homology domain CLH39_14720 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA CLH39_14720 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLH39_14720 IPR001296 Glycosyl transferase, family 1 CLH39_14725 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLH39_14725 IPR004013 PHP domain CLH39_14725 IPR029460 DNA polymerase, helix-hairpin-helix motif CLH39_14725 IPR004805 DNA polymerase III, alpha subunit CLH39_14725 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLH39_14725 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CLH39_14725 IPR040982 DNA polymerase III alpha subunit finger domain CLH39_14725 IPR016195 Polymerase/histidinol phosphatase-like CLH39_14725 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CLH39_14730 IPR003593 AAA+ ATPase domain CLH39_14730 IPR001650 Helicase, C-terminal CLH39_14730 IPR011545 DEAD/DEAH box helicase domain CLH39_14730 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_14730 IPR024590 RNA helicase HrpA, C-terminal CLH39_14730 IPR011709 Domain of unknown function DUF1605 CLH39_14730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14730 IPR010222 RNA helicase HrpA CLH39_14730 IPR007502 Helicase-associated domain CLH39_14735 IPR001048 Aspartate/glutamate/uridylate kinase CLH39_14735 IPR016181 Acyl-CoA N-acyltransferase CLH39_14735 IPR000182 GNAT domain CLH39_14735 IPR010167 Amino-acid N-acetyltransferase CLH39_14735 IPR033719 N-acetylglutamate synthase, kinase-like domain CLH39_14735 IPR036393 Acetylglutamate kinase-like superfamily CLH39_14740 IPR036766 Fe(II) trafficking protein YggX superfamily CLH39_14740 IPR007457 Fe(II) trafficking protein YggX CLH39_14745 IPR029787 Nucleotide cyclase CLH39_14745 IPR000160 GGDEF domain CLH39_14745 IPR035919 EAL domain superfamily CLH39_14745 IPR001633 EAL domain CLH39_14745 IPR016132 Phytochrome chromophore attachment domain CLH39_14745 IPR003018 GAF domain CLH39_14745 IPR013515 Phytochrome, central region CLH39_14745 IPR029016 GAF-like domain superfamily CLH39_14745 IPR001294 Phytochrome CLH39_14750 IPR028366 Phosphate transport system protein PhoU CLH39_14750 IPR038078 PhoU-like domain superfamily CLH39_14750 IPR026022 PhoU domain CLH39_14755 IPR004788 Ribose 5-phosphate isomerase, type A CLH39_14755 IPR037171 NagB/RpiA transferase-like CLH39_14755 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CLH39_14760 IPR006504 Transcriptional regulator Spx/MgsR CLH39_14760 IPR006660 Arsenate reductase-like CLH39_14760 IPR036249 Thioredoxin-like superfamily CLH39_14765 IPR035906 MetI-like superfamily CLH39_14765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_14770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_14770 IPR035906 MetI-like superfamily CLH39_14775 IPR003593 AAA+ ATPase domain CLH39_14775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14775 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_14775 IPR003439 ABC transporter-like CLH39_14775 IPR017871 ABC transporter, conserved site CLH39_14775 IPR013611 Transport-associated OB, type 2 CLH39_14775 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CLH39_14780 IPR006059 Bacterial extracellular solute-binding protein CLH39_14780 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CLH39_14795 IPR041166 LapB, rubredoxin metal binding domain CLH39_14795 IPR003593 AAA+ ATPase domain CLH39_14795 IPR004504 DNA repair protein RadA CLH39_14795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14795 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CLH39_14795 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_14795 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_14800 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_14800 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_14800 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_14800 IPR036291 NAD(P)-binding domain superfamily CLH39_14805 IPR029066 PLP-binding barrel CLH39_14805 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CLH39_14805 IPR001608 Alanine racemase, N-terminal CLH39_14805 IPR011079 Alanine racemase, C-terminal CLH39_14805 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLH39_14805 IPR000821 Alanine racemase CLH39_14810 IPR017827 Hydroxysqualene synthase HpnC CLH39_14810 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head CLH39_14810 IPR002060 Squalene/phytoene synthase CLH39_14810 IPR008949 Isoprenoid synthase domain superfamily CLH39_14815 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head CLH39_14815 IPR019845 Squalene/phytoene synthase, conserved site CLH39_14815 IPR008949 Isoprenoid synthase domain superfamily CLH39_14820 IPR002937 Amine oxidase CLH39_14820 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_14820 IPR014103 Zeta-carotene desaturase CLH39_14825 IPR016181 Acyl-CoA N-acyltransferase CLH39_14825 IPR000182 GNAT domain CLH39_14830 IPR037158 Threonine synthase, N-terminal domain superfamily CLH39_14830 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLH39_14830 IPR029144 Threonine synthase, N-terminal CLH39_14830 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLH39_14830 IPR001926 Pyridoxal-phosphate dependent enzyme CLH39_14830 IPR004450 Threonine synthase-like CLH39_14835 IPR036291 NAD(P)-binding domain superfamily CLH39_14835 IPR002912 ACT domain CLH39_14835 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CLH39_14835 IPR016204 Homoserine dehydrogenase CLH39_14835 IPR001342 Homoserine dehydrogenase, catalytic CLH39_14835 IPR019811 Homoserine dehydrogenase, conserved site CLH39_14840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_14840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_14840 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_14840 IPR004839 Aminotransferase, class I/classII CLH39_14845 IPR036748 MTH938-like superfamily CLH39_14845 IPR007523 NDUFAF3/Mth938 domain-containing protein CLH39_14850 IPR013766 Thioredoxin domain CLH39_14850 IPR036249 Thioredoxin-like superfamily CLH39_14850 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLH39_14855 IPR029060 PIN-like domain superfamily CLH39_14855 IPR002716 PIN domain CLH39_14855 IPR003714 PhoH-like protein CLH39_14855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14860 IPR005255 PdxA family CLH39_14865 IPR038770 Sodium/solute symporter superfamily CLH39_14865 IPR016833 Putative sodium bile acid cotransporter CLH39_14870 IPR007693 DNA helicase, DnaB-like, N-terminal CLH39_14870 IPR003593 AAA+ ATPase domain CLH39_14870 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CLH39_14870 IPR007694 DNA helicase, DnaB-like, C-terminal CLH39_14870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14870 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLH39_14870 IPR007692 DNA helicase, DnaB type CLH39_14875 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CLH39_14875 IPR020069 Ribosomal protein L9, C-terminal CLH39_14875 IPR020594 Ribosomal protein L9, bacteria/chloroplast CLH39_14875 IPR020070 Ribosomal protein L9, N-terminal CLH39_14875 IPR000244 Ribosomal protein L9 CLH39_14875 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLH39_14875 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CLH39_14880 IPR036870 Ribosomal protein S18 superfamily CLH39_14880 IPR018275 Ribosomal protein S18, conserved site CLH39_14880 IPR001648 Ribosomal protein S18 CLH39_14885 IPR000424 Primosome PriB/single-strand DNA-binding CLH39_14885 IPR023646 Primosomal replication protein PriB CLH39_14885 IPR012340 Nucleic acid-binding, OB-fold CLH39_14890 IPR000529 Ribosomal protein S6 CLH39_14890 IPR020814 Ribosomal protein S6, plastid/chloroplast CLH39_14890 IPR035980 Ribosomal protein S6 superfamily CLH39_14890 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLH39_14895 IPR003801 GTP cyclohydrolase FolE2/MptA CLH39_14895 IPR022838 GTP cyclohydrolase FolE2 CLH39_14900 IPR033248 Transketolase, C-terminal domain CLH39_14900 IPR005474 Transketolase, N-terminal CLH39_14900 IPR005475 Transketolase-like, pyrimidine-binding domain CLH39_14900 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLH39_14900 IPR029061 Thiamin diphosphate-binding fold CLH39_14900 IPR005477 Deoxyxylulose-5-phosphate synthase CLH39_14900 IPR020826 Transketolase binding site CLH39_14905 IPR000092 Polyprenyl synthetase CLH39_14905 IPR008949 Isoprenoid synthase domain superfamily CLH39_14905 IPR033749 Polyprenyl synthetase, conserved site CLH39_14910 IPR037004 Exonuclease VII, small subunit superfamily CLH39_14910 IPR003761 Exonuclease VII, small subunit CLH39_14915 IPR036873 Rhodanese-like domain superfamily CLH39_14915 IPR001763 Rhodanese-like domain CLH39_14925 IPR022919 Peptidase M48, protease HtpX, putative CLH39_14925 IPR001915 Peptidase M48 CLH39_14945 IPR004660 Pyruvate dehydrogenase E1 component CLH39_14945 IPR005474 Transketolase, N-terminal CLH39_14945 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLH39_14945 IPR029061 Thiamin diphosphate-binding fold CLH39_14945 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CLH39_14945 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CLH39_14960 IPR029060 PIN-like domain superfamily CLH39_14960 IPR002298 DNA polymerase A CLH39_14960 IPR018320 DNA polymerase 1 CLH39_14960 IPR020045 DNA polymerase I-like, H3TH domain CLH39_14960 IPR008918 Helix-hairpin-helix motif, class 2 CLH39_14960 IPR036397 Ribonuclease H superfamily CLH39_14960 IPR019760 DNA-directed DNA polymerase, family A, conserved site CLH39_14960 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CLH39_14960 IPR002421 5'-3' exonuclease, N-terminal CLH39_14960 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CLH39_14960 IPR002562 3'-5' exonuclease domain CLH39_14960 IPR001098 DNA-directed DNA polymerase, family A, palm domain CLH39_14960 IPR012337 Ribonuclease H-like superfamily CLH39_14965 IPR031100 LOG family CLH39_14965 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CLH39_14970 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_14970 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CLH39_14970 IPR018313 Solute-binding protein family 3, conserved site CLH39_14975 IPR035906 MetI-like superfamily CLH39_14975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_14975 IPR030199 Histidine transport system permease protein HisQ CLH39_14975 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_14980 IPR035906 MetI-like superfamily CLH39_14980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_14980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_14990 IPR023753 FAD/NAD(P)-binding domain CLH39_14990 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_14995 IPR006298 GTP-binding protein TypA CLH39_14995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_14995 IPR035651 BipA, domain V CLH39_14995 IPR035647 EF-G domain III/V-like CLH39_14995 IPR000640 Elongation factor EFG, domain V-like CLH39_14995 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_14995 IPR000795 Transcription factor, GTP-binding domain CLH39_14995 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_14995 IPR031157 Tr-type G domain, conserved site CLH39_14995 IPR042116 GTP-binding protein TypA/BipA, C-terminal CLH39_14995 IPR005225 Small GTP-binding protein domain CLH39_15000 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_15000 IPR002501 Pseudouridine synthase II, N-terminal CLH39_15000 IPR014780 tRNA pseudouridine synthase II, TruB CLH39_15000 IPR032819 tRNA pseudouridylate synthase B, C-terminal CLH39_15005 IPR000238 Ribosome-binding factor A CLH39_15005 IPR023799 Ribosome-binding factor A domain superfamily CLH39_15005 IPR015946 K homology domain-like, alpha/beta CLH39_15010 IPR023115 Translation initiation factor IF- 2, domain 3 CLH39_15010 IPR015760 Translation initiation factor IF- 2 CLH39_15010 IPR000178 Translation initiation factor aIF-2, bacterial-like CLH39_15010 IPR000795 Transcription factor, GTP-binding domain CLH39_15010 IPR009061 Putative DNA-binding domain superfamily CLH39_15010 IPR013575 Initiation factor 2 associated domain, bacterial CLH39_15010 IPR006847 Translation initiation factor IF-2, N-terminal CLH39_15010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15010 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CLH39_15010 IPR005225 Small GTP-binding protein domain CLH39_15010 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_15015 IPR012340 Nucleic acid-binding, OB-fold CLH39_15015 IPR030842 Transcription termination/antitermination protein NusA, bacterial CLH39_15015 IPR004087 K Homology domain CLH39_15015 IPR015946 K homology domain-like, alpha/beta CLH39_15015 IPR025249 KH domain, NusA-like CLH39_15015 IPR003029 S1 domain CLH39_15015 IPR022967 RNA-binding domain, S1 CLH39_15015 IPR036555 NusA, N-terminal domain superfamily CLH39_15015 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CLH39_15015 IPR010214 Transcription termination factor NusA, C-terminal duplication CLH39_15015 IPR013735 Transcription factor NusA, N-terminal CLH39_15015 IPR009019 K homology domain superfamily, prokaryotic type CLH39_15015 IPR010213 Transcription termination factor NusA CLH39_15020 IPR003728 Ribosome maturation factor RimP CLH39_15020 IPR028998 Ribosome maturation factor RimP, C-terminal CLH39_15020 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CLH39_15020 IPR028989 Ribosome maturation factor RimP, N-terminal CLH39_15020 IPR035956 RimP, N-terminal domain superfamily CLH39_15030 IPR002942 RNA-binding S4 domain CLH39_15030 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLH39_15030 IPR036986 RNA-binding S4 domain superfamily CLH39_15030 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLH39_15030 IPR006145 Pseudouridine synthase, RsuA/RluA CLH39_15030 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CLH39_15030 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_15035 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15035 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15035 IPR005234 Chromosome segregation/condensation protein ScpB CLH39_15080 IPR007897 PHB accumulation regulatory CLH39_15080 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CLH39_15080 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CLH39_15085 IPR011283 Acetoacetyl-CoA reductase CLH39_15085 IPR036291 NAD(P)-binding domain superfamily CLH39_15085 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_15085 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_15090 IPR029058 Alpha/Beta hydrolase fold CLH39_15090 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain CLH39_15090 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I CLH39_15095 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CLH39_15095 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLH39_15095 IPR003730 Multi-copper polyphenol oxidoreductase CLH39_15100 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLH39_15100 IPR006145 Pseudouridine synthase, RsuA/RluA CLH39_15100 IPR002942 RNA-binding S4 domain CLH39_15100 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_15100 IPR006225 Pseudouridine synthase, RluC/RluD CLH39_15100 IPR036986 RNA-binding S4 domain superfamily CLH39_15105 IPR011990 Tetratricopeptide-like helical domain superfamily CLH39_15105 IPR039565 Outer membrane lipoprotein BamD-like CLH39_15105 IPR017689 Outer membrane protein assembly factor BamD CLH39_15110 IPR009057 Homeobox-like domain superfamily CLH39_15110 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLH39_15110 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLH39_15110 IPR001647 DNA-binding HTH domain, TetR-type CLH39_15110 IPR013572 Transcription regulator MAATS, C-terminal CLH39_15115 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_15115 IPR004681 TRAP transporter large membrane protein DctM CLH39_15125 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_15125 IPR004682 TRAP transporter solute receptor, DctP family CLH39_15125 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_15130 IPR008471 MnmC-like methyltransferase CLH39_15130 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CLH39_15130 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CLH39_15130 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_15130 IPR006076 FAD dependent oxidoreductase CLH39_15135 IPR010424 Ethanolamine utilisation EutQ CLH39_15135 IPR014710 RmlC-like jelly roll fold CLH39_15135 IPR011051 RmlC-like cupin domain superfamily CLH39_15145 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15145 IPR002577 Helix-turn-helix, HxlR type CLH39_15145 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15155 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_15155 IPR006935 Helicase/UvrB, N-terminal CLH39_15155 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CLH39_15155 IPR006555 ATP-dependent helicase, C-terminal CLH39_15160 IPR012337 Ribonuclease H-like superfamily CLH39_15160 IPR018974 Tex-like protein, N-terminal CLH39_15160 IPR037027 YqgF/RNase H-like domain superfamily CLH39_15160 IPR012340 Nucleic acid-binding, OB-fold CLH39_15160 IPR023319 Tex-like protein, HTH domain superfamily CLH39_15160 IPR041692 HHH domain 9 CLH39_15160 IPR006641 YqgF/RNase H-like domain CLH39_15160 IPR023323 Tex-like domain superfamily CLH39_15160 IPR003029 S1 domain CLH39_15160 IPR010994 RuvA domain 2-like CLH39_15160 IPR032639 Tex protein, YqgF-like domain CLH39_15160 IPR022967 RNA-binding domain, S1 CLH39_15170 IPR018357 Hexapeptide transferase, conserved site CLH39_15170 IPR001451 Hexapeptide repeat CLH39_15170 IPR011004 Trimeric LpxA-like superfamily CLH39_15175 IPR024109 Tryptophan-tRNA ligase, bacterial-type CLH39_15175 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_15175 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLH39_15175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_15175 IPR002306 Tryptophan-tRNA ligase CLH39_15175 IPR036913 YegP-like superfamily CLH39_15180 IPR030870 Cell division protein ZapE CLH39_15180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15180 IPR005654 ATPase, AFG1-like CLH39_15185 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLH39_15185 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLH39_15185 IPR023753 FAD/NAD(P)-binding domain CLH39_15185 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_15185 IPR006258 Dihydrolipoamide dehydrogenase CLH39_15185 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CLH39_15185 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CLH39_15190 IPR000089 Biotin/lipoyl attachment CLH39_15190 IPR036625 E3-binding domain superfamily CLH39_15190 IPR004167 Peripheral subunit-binding domain CLH39_15190 IPR011053 Single hybrid motif CLH39_15190 IPR006255 Dihydrolipoamide succinyltransferase CLH39_15190 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLH39_15190 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLH39_15190 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLH39_15195 IPR005475 Transketolase-like, pyrimidine-binding domain CLH39_15195 IPR029061 Thiamin diphosphate-binding fold CLH39_15195 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CLH39_15195 IPR011603 2-oxoglutarate dehydrogenase E1 component CLH39_15195 IPR001017 Dehydrogenase, E1 component CLH39_15195 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CLH39_15195 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CLH39_15200 IPR012301 Malic enzyme, N-terminal domain CLH39_15200 IPR012188 NAD(P)-dependent malic enzyme CLH39_15200 IPR015884 Malic enzyme, conserved site CLH39_15200 IPR012302 Malic enzyme, NAD-binding CLH39_15200 IPR002505 Phosphate acetyl/butaryl transferase CLH39_15200 IPR036291 NAD(P)-binding domain superfamily CLH39_15200 IPR042113 Phosphate acetyltransferase, domain 1 CLH39_15200 IPR037062 Malic enzyme, N-terminal domain superfamily CLH39_15200 IPR042112 Phosphate acetyltransferase, domain 2 CLH39_15210 IPR014743 Chloride channel, core CLH39_15210 IPR001807 Chloride channel, voltage gated CLH39_15215 IPR003804 L-lactate permease CLH39_15220 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_15220 IPR011711 GntR, C-terminal CLH39_15220 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15220 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15220 IPR000524 Transcription regulator HTH, GntR CLH39_15225 IPR016143 Citrate synthase-like, small alpha subdomain CLH39_15225 IPR002020 Citrate synthase CLH39_15225 IPR019810 Citrate synthase active site CLH39_15225 IPR024176 Citrate synthase, bacterial-type CLH39_15225 IPR010953 Citrate synthase, type I CLH39_15225 IPR016142 Citrate synthase-like, large alpha subdomain CLH39_15225 IPR036969 Citrate synthase superfamily CLH39_15230 IPR036714 Flavinator of succinate dehydrogenase superfamily CLH39_15230 IPR005631 Flavinator of succinate dehydrogenase CLH39_15235 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_15235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_15235 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_15235 IPR012675 Beta-grasp domain superfamily CLH39_15235 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CLH39_15235 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CLH39_15235 IPR009051 Alpha-helical ferredoxin CLH39_15235 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_15240 IPR011281 Succinate dehydrogenase, flavoprotein subunit CLH39_15240 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CLH39_15240 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CLH39_15240 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CLH39_15240 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CLH39_15240 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_15240 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CLH39_15240 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CLH39_15250 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CLH39_15250 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CLH39_15250 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CLH39_15250 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CLH39_15255 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15255 IPR011663 UbiC transcription regulator-associated CLH39_15255 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CLH39_15255 IPR000524 Transcription regulator HTH, GntR CLH39_15255 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15260 IPR036291 NAD(P)-binding domain superfamily CLH39_15260 IPR010945 Malate dehydrogenase, type 2 CLH39_15260 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLH39_15260 IPR001236 Lactate/malate dehydrogenase, N-terminal CLH39_15260 IPR022383 Lactate/malate dehydrogenase, C-terminal CLH39_15260 IPR001557 L-lactate/malate dehydrogenase CLH39_15265 IPR012910 TonB-dependent receptor, plug domain CLH39_15265 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_15265 IPR011662 Secretin/TonB, short N-terminal domain CLH39_15265 IPR039423 TonB-dependent receptor-like CLH39_15265 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_15265 IPR010916 TonB box, conserved site CLH39_15265 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_15265 IPR010917 TonB-dependent receptor, conserved site CLH39_15265 IPR010105 TonB-dependent siderophore receptor CLH39_15280 IPR025944 Sigma-54 interaction domain, conserved site CLH39_15280 IPR009057 Homeobox-like domain superfamily CLH39_15280 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_15280 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal CLH39_15280 IPR003593 AAA+ ATPase domain CLH39_15280 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15280 IPR002197 DNA binding HTH domain, Fis-type CLH39_15280 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLH39_15280 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR CLH39_15285 IPR040442 Pyruvate kinase-like domain superfamily CLH39_15285 IPR012695 2-methylisocitrate lyase CLH39_15285 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CLH39_15285 IPR039556 ICL/PEPM domain CLH39_15285 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_15290 IPR002020 Citrate synthase CLH39_15290 IPR036969 Citrate synthase superfamily CLH39_15290 IPR011278 2-methylcitrate synthase/citrate synthase type I CLH39_15290 IPR016143 Citrate synthase-like, small alpha subdomain CLH39_15290 IPR019810 Citrate synthase active site CLH39_15290 IPR016142 Citrate synthase-like, large alpha subdomain CLH39_15290 IPR024176 Citrate synthase, bacterial-type CLH39_15305 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLH39_15305 IPR015932 Aconitase, domain 2 CLH39_15305 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLH39_15305 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLH39_15305 IPR036008 Aconitase, iron-sulfur domain CLH39_15305 IPR004406 Aconitase B CLH39_15305 IPR015933 Aconitase B, HEAT-like domain CLH39_15305 IPR036288 Aconitase B, HEAT-like domain superfamily CLH39_15305 IPR015929 Aconitase B, swivel CLH39_15305 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLH39_15310 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_15310 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_15310 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_15310 IPR026289 Solute binding protein, TakP-like CLH39_15310 IPR041721 Lactate-binding periplasmic protein TTHA0766 CLH39_15320 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_15320 IPR004681 TRAP transporter large membrane protein DctM CLH39_15320 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_15320 IPR004681 TRAP transporter large membrane protein DctM CLH39_15335 IPR013185 Translation elongation factor, KOW-like CLH39_15335 IPR008991 Translation protein SH3-like domain superfamily CLH39_15335 IPR015365 Elongation factor P, C-terminal CLH39_15335 IPR013852 Translation elongation factor P/YeiP, conserved site CLH39_15335 IPR012340 Nucleic acid-binding, OB-fold CLH39_15335 IPR014722 Ribosomal protein L2, domain 2 CLH39_15335 IPR011768 Translation elongation factor P CLH39_15335 IPR020599 Translation elongation factor P/YeiP CLH39_15335 IPR001059 Translation elongation factor P/YeiP, central CLH39_15340 IPR036291 NAD(P)-binding domain superfamily CLH39_15340 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_15340 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_15350 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_15350 IPR020845 AMP-binding, conserved site CLH39_15350 IPR000873 AMP-dependent synthetase/ligase CLH39_15350 IPR042099 AMP-dependent synthetase-like superfamily CLH39_15355 IPR020613 Thiolase, conserved site CLH39_15355 IPR020616 Thiolase, N-terminal CLH39_15355 IPR020617 Thiolase, C-terminal CLH39_15355 IPR020610 Thiolase, active site CLH39_15355 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_15355 IPR016039 Thiolase-like CLH39_15355 IPR002155 Thiolase CLH39_15355 IPR012805 Acetyl-CoA C-acyltransferase FadA CLH39_15365 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_15365 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_15365 IPR004682 TRAP transporter solute receptor, DctP family CLH39_15370 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_15370 IPR004681 TRAP transporter large membrane protein DctM CLH39_15375 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_15375 IPR036291 NAD(P)-binding domain superfamily CLH39_15375 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_15385 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CLH39_15385 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLH39_15385 IPR039697 Iron-type alcohol dehydrogenase-like CLH39_15390 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_15390 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_15390 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_15390 IPR015590 Aldehyde dehydrogenase domain CLH39_15390 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_15390 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_15395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15395 IPR002197 DNA binding HTH domain, Fis-type CLH39_15395 IPR009057 Homeobox-like domain superfamily CLH39_15395 IPR029016 GAF-like domain superfamily CLH39_15395 IPR002078 RNA polymerase sigma factor 54 interaction domain CLH39_15395 IPR003018 GAF domain CLH39_15395 IPR003593 AAA+ ATPase domain CLH39_15395 IPR025944 Sigma-54 interaction domain, conserved site CLH39_15405 IPR003439 ABC transporter-like CLH39_15405 IPR003593 AAA+ ATPase domain CLH39_15405 IPR017871 ABC transporter, conserved site CLH39_15405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15405 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLH39_15410 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_15410 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLH39_15410 IPR035906 MetI-like superfamily CLH39_15415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_15415 IPR035906 MetI-like superfamily CLH39_15430 IPR006089 Acyl-CoA dehydrogenase, conserved site CLH39_15430 IPR041504 Adaptive response protein AidB, N-terminal CLH39_15430 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_15430 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_15430 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_15430 IPR034184 Putative acyl-CoA dehydrogenase AidB CLH39_15430 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_15435 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CLH39_15435 IPR004488 Magnesium/cobalt transport protein CorA CLH39_15440 IPR006696 Protein of unknown function DUF423 CLH39_15445 IPR001365 Adenosine/AMP deaminase domain CLH39_15445 IPR028892 Adenine deaminase type 2 CLH39_15445 IPR032466 Metal-dependent hydrolase CLH39_15445 IPR006330 Adenosine/adenine deaminase CLH39_15450 IPR011034 Formyl transferase-like, C-terminal domain superfamily CLH39_15450 IPR003180 Methylpurine-DNA glycosylase CLH39_15450 IPR036995 Methylpurine-DNA glycosylase superfamily CLH39_15465 IPR005025 NADPH-dependent FMN reductase-like CLH39_15465 IPR010089 Flavoprotein WrbA-like CLH39_15465 IPR029039 Flavoprotein-like superfamily CLH39_15465 IPR008254 Flavodoxin/nitric oxide synthase CLH39_15465 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic CLH39_15470 IPR010987 Glutathione S-transferase, C-terminal-like CLH39_15470 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CLH39_15470 IPR040079 Glutathione Transferase family CLH39_15470 IPR004045 Glutathione S-transferase, N-terminal CLH39_15470 IPR016639 Glutathione S-transferase Omega/GSH CLH39_15470 IPR036249 Thioredoxin-like superfamily CLH39_15475 IPR020920 L-lactate dehydrogenase, bacterial CLH39_15475 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CLH39_15475 IPR037396 FMN hydroxy acid dehydrogenase domain CLH39_15475 IPR000262 FMN-dependent dehydrogenase CLH39_15475 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CLH39_15475 IPR013785 Aldolase-type TIM barrel CLH39_15490 IPR010105 TonB-dependent siderophore receptor CLH39_15490 IPR010917 TonB-dependent receptor, conserved site CLH39_15490 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_15490 IPR010916 TonB box, conserved site CLH39_15490 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_15490 IPR012910 TonB-dependent receptor, plug domain CLH39_15490 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_15490 IPR039423 TonB-dependent receptor-like CLH39_15495 IPR001789 Signal transduction response regulator, receiver domain CLH39_15495 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_15495 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_15495 IPR039420 Transcriptional regulatory protein WalR-like CLH39_15495 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15495 IPR011006 CheY-like superfamily CLH39_15500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_15500 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_15500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_15500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_15500 IPR005467 Histidine kinase domain CLH39_15500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_15500 IPR003660 HAMP domain CLH39_15515 IPR034300 NADP transhydrogenase beta-like domain CLH39_15515 IPR012136 NADP transhydrogenase, beta subunit CLH39_15515 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLH39_15520 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CLH39_15525 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CLH39_15525 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CLH39_15525 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CLH39_15525 IPR036291 NAD(P)-binding domain superfamily CLH39_15525 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CLH39_15530 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_15530 IPR003439 ABC transporter-like CLH39_15530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15530 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CLH39_15530 IPR017871 ABC transporter, conserved site CLH39_15530 IPR003593 AAA+ ATPase domain CLH39_15530 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CLH39_15530 IPR013611 Transport-associated OB, type 2 CLH39_15535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_15535 IPR005667 Sulphate ABC transporter permease protein 2 CLH39_15535 IPR035906 MetI-like superfamily CLH39_15535 IPR011866 Sulphate ABC transporter, permease protein CysW CLH39_15545 IPR023446 Carnitine operon protein CaiE CLH39_15545 IPR011004 Trimeric LpxA-like superfamily CLH39_15545 IPR001451 Hexapeptide repeat CLH39_15555 IPR003010 Carbon-nitrogen hydrolase CLH39_15555 IPR000132 Nitrilase/cyanide hydratase, conserved site CLH39_15555 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_15560 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CLH39_15570 IPR010200 HflC CLH39_15570 IPR001107 Band 7 domain CLH39_15570 IPR036013 Band 7/SPFH domain superfamily CLH39_15585 IPR002912 ACT domain CLH39_15585 IPR036393 Acetylglutamate kinase-like superfamily CLH39_15585 IPR027795 CASTOR, ACT domain CLH39_15585 IPR018042 Aspartate kinase, conserved site CLH39_15585 IPR001341 Aspartate kinase CLH39_15585 IPR005260 Aspartate kinase, monofunctional class CLH39_15585 IPR001048 Aspartate/glutamate/uridylate kinase CLH39_15585 IPR041740 Aspartokinase catalytic domain CLH39_15590 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CLH39_15590 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CLH39_15590 IPR012094 tRNA(Ile)-lysidine synthase CLH39_15590 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CLH39_15590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_15595 IPR001095 Acetyl-CoA carboxylase, alpha subunit CLH39_15595 IPR029045 ClpP/crotonase-like domain superfamily CLH39_15595 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CLH39_15605 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CLH39_15605 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CLH39_15605 IPR015803 Cysteine-tRNA ligase CLH39_15605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_15605 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLH39_15605 IPR032678 tRNA synthetases class I, catalytic domain CLH39_15615 IPR029000 Cyclophilin-like domain superfamily CLH39_15615 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CLH39_15615 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CLH39_15615 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CLH39_15620 IPR010138 UDP-2,3-diacylglucosamine hydrolase CLH39_15620 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CLH39_15630 IPR003824 Undecaprenyl-diphosphatase UppP CLH39_15635 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_15635 IPR005170 Transporter-associated domain CLH39_15635 IPR000644 CBS domain CLH39_15635 IPR005496 Integral membrane protein TerC CLH39_15635 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_15640 IPR000760 Inositol monophosphatase-like CLH39_15640 IPR033942 Inositol monophosphatase CLH39_15640 IPR020550 Inositol monophosphatase, conserved site CLH39_15640 IPR020583 Inositol monophosphatase, metal-binding site CLH39_15640 IPR022337 Inositol monophosphatase, SuhB CLH39_15645 IPR029028 Alpha/beta knot methyltransferases CLH39_15645 IPR004384 RNA methyltransferase TrmJ/LasT CLH39_15645 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLH39_15645 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLH39_15655 IPR006161 Conserved hypothetical protein CHP00336 CLH39_15655 IPR006160 Short chain fatty acid transporter AtoE CLH39_15660 IPR000120 Amidase CLH39_15660 IPR020556 Amidase, conserved site CLH39_15660 IPR023631 Amidase signature domain CLH39_15660 IPR036928 Amidase signature (AS) superfamily CLH39_15660 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLH39_15665 IPR005777 Acetyl-S-ACP:malonate ACP transferase CLH39_15665 IPR037171 NagB/RpiA transferase-like CLH39_15670 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CLH39_15670 IPR009662 Malonate decarboxylase delta subunit CLH39_15675 IPR017556 Biotin-independent malonate decarboxylase, beta subunit CLH39_15675 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CLH39_15675 IPR029045 ClpP/crotonase-like domain superfamily CLH39_15675 IPR034733 Acetyl-CoA carboxylase CLH39_15690 IPR002736 Triphosphoribosyl-dephospho-CoA protein CLH39_15690 IPR017555 Triphosphoribosyl-dephospho-CoA synthase CLH39_15695 IPR032821 Ketoacyl-synthetase, C-terminal extension CLH39_15695 IPR011032 GroES-like superfamily CLH39_15695 IPR013154 Alcohol dehydrogenase, N-terminal CLH39_15695 IPR013149 Alcohol dehydrogenase, C-terminal CLH39_15695 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLH39_15695 IPR014030 Beta-ketoacyl synthase, N-terminal CLH39_15695 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLH39_15695 IPR036291 NAD(P)-binding domain superfamily CLH39_15695 IPR014043 Acyl transferase CLH39_15695 IPR036736 ACP-like superfamily CLH39_15695 IPR018201 Beta-ketoacyl synthase, active site CLH39_15695 IPR020807 Polyketide synthase, dehydratase domain CLH39_15695 IPR042104 Polyketide synthase, dehydratase domain superfamily CLH39_15695 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLH39_15695 IPR013968 Polyketide synthase, ketoreductase domain CLH39_15695 IPR016039 Thiolase-like CLH39_15695 IPR020843 Polyketide synthase, enoylreductase domain CLH39_15695 IPR009081 Phosphopantetheine binding ACP domain CLH39_15695 IPR014031 Beta-ketoacyl synthase, C-terminal CLH39_15695 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLH39_15700 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain CLH39_15700 IPR005119 LysR, substrate-binding CLH39_15700 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15700 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15700 IPR000847 Transcription regulator HTH, LysR CLH39_15705 IPR023408 Mechanosensitive ion channel MscS domain superfamily CLH39_15705 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLH39_15705 IPR006686 Mechanosensitive ion channel MscS, conserved site CLH39_15705 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLH39_15705 IPR006685 Mechanosensitive ion channel MscS CLH39_15705 IPR010920 LSM domain superfamily CLH39_15705 IPR008910 Conserved TM helix CLH39_15715 IPR011251 Luciferase-like domain CLH39_15715 IPR036661 Luciferase-like domain superfamily CLH39_15715 IPR019949 Luciferase family oxidoreductase, group 1 CLH39_15720 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15720 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15720 IPR000847 Transcription regulator HTH, LysR CLH39_15720 IPR005119 LysR, substrate-binding CLH39_15720 IPR037421 HTH-type transcriptional regulator ClcR, PBP2 domain CLH39_15725 IPR005064 Bordetella uptake gene CLH39_15725 IPR042100 Bordetella uptake gene, domain 1 CLH39_15730 IPR029055 Nucleophile aminohydrolases, N-terminal CLH39_15735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15735 IPR017871 ABC transporter, conserved site CLH39_15735 IPR003439 ABC transporter-like CLH39_15735 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_15735 IPR011527 ABC transporter type 1, transmembrane domain CLH39_15735 IPR003593 AAA+ ATPase domain CLH39_15735 IPR039421 Type I protein exporter CLH39_15740 IPR004547 Glucosamine-6-phosphate isomerase CLH39_15740 IPR037171 NagB/RpiA transferase-like CLH39_15740 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CLH39_15740 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CLH39_15745 IPR003423 Outer membrane efflux protein CLH39_15745 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CLH39_15750 IPR017911 ABC transporter, macrolide export, ATP-binding domain CLH39_15750 IPR025857 MacB-like periplasmic core domain CLH39_15750 IPR017871 ABC transporter, conserved site CLH39_15750 IPR003439 ABC transporter-like CLH39_15750 IPR003838 ABC transporter permease protein domain CLH39_15750 IPR003593 AAA+ ATPase domain CLH39_15750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15755 IPR030190 Macrolide export protein MacA CLH39_15755 IPR006143 RND efflux pump, membrane fusion protein CLH39_15755 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLH39_15760 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_15760 IPR010916 TonB box, conserved site CLH39_15760 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CLH39_15760 IPR039423 TonB-dependent receptor-like CLH39_15760 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_15760 IPR010917 TonB-dependent receptor, conserved site CLH39_15760 IPR010105 TonB-dependent siderophore receptor CLH39_15760 IPR012910 TonB-dependent receptor, plug domain CLH39_15760 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_15765 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLH39_15765 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLH39_15770 IPR007861 DNA mismatch repair protein MutS, clamp CLH39_15770 IPR000432 DNA mismatch repair protein MutS, C-terminal CLH39_15770 IPR017261 DNA mismatch repair protein MutS/MSH CLH39_15770 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CLH39_15770 IPR005748 DNA mismatch repair protein MutS CLH39_15770 IPR007860 DNA mismatch repair protein MutS, connector domain CLH39_15770 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CLH39_15770 IPR016151 DNA mismatch repair protein MutS, N-terminal CLH39_15770 IPR007696 DNA mismatch repair protein MutS, core CLH39_15770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15770 IPR036678 MutS, connector domain superfamily CLH39_15775 IPR003347 JmjC domain CLH39_15775 IPR039994 JmjC domain-containing CLH39_15785 IPR004711 Benzoate transporter CLH39_15790 IPR036396 Cytochrome P450 superfamily CLH39_15790 IPR017972 Cytochrome P450, conserved site CLH39_15790 IPR002397 Cytochrome P450, B-class CLH39_15790 IPR001128 Cytochrome P450 CLH39_15795 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CLH39_15795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_15795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_15795 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CLH39_15795 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_15795 IPR004839 Aminotransferase, class I/classII CLH39_15800 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_15800 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CLH39_15800 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_15800 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_15800 IPR005814 Aminotransferase class-III CLH39_15805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15805 IPR004472 Dethiobiotin synthase BioD CLH39_15820 IPR010653 NlpB/DapX lipoprotein CLH39_15820 IPR042268 Outer membrane protein assembly factor BamC, C-terminal CLH39_15820 IPR014524 Outer membrane protein assembly factor BamC CLH39_15825 IPR020625 Schiff base-forming aldolase, active site CLH39_15825 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLH39_15825 IPR013785 Aldolase-type TIM barrel CLH39_15825 IPR020624 Schiff base-forming aldolase, conserved site CLH39_15825 IPR002220 DapA-like CLH39_15830 IPR008915 Peptidase M50 CLH39_15835 IPR006070 YrdC-like domain CLH39_15835 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CLH39_15850 IPR022924 Cardiolipin synthase CLH39_15850 IPR027379 Cardiolipin synthase N-terminal CLH39_15850 IPR030874 Cardiolipin synthase, Firmicutes-type CLH39_15850 IPR001736 Phospholipase D/Transphosphatidylase CLH39_15850 IPR025202 Phospholipase D-like domain CLH39_15855 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15855 IPR012906 PaaX-like, N-terminal CLH39_15855 IPR013225 PaaX-like, C-terminal CLH39_15855 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX CLH39_15860 IPR001734 Sodium/solute symporter CLH39_15860 IPR018212 Sodium/solute symporter, conserved site CLH39_15860 IPR014083 Cation/acetate symporter ActP CLH39_15860 IPR038377 Sodium/glucose symporter superfamily CLH39_15880 IPR005119 LysR, substrate-binding CLH39_15880 IPR000847 Transcription regulator HTH, LysR CLH39_15880 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15880 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15890 IPR000917 Sulfatase, N-terminal CLH39_15890 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLH39_15890 IPR012160 Lipoteichoic acid synthase-like CLH39_15905 IPR007353 Protein of unknown function DUF421 CLH39_15905 IPR023090 UPF0702, alpha/beta domain superfamily CLH39_15910 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CLH39_15910 IPR008168 Cytochrome c, class IC CLH39_15910 IPR009056 Cytochrome c-like domain CLH39_15910 IPR036909 Cytochrome c-like domain superfamily CLH39_15930 IPR036390 Winged helix DNA-binding domain superfamily CLH39_15930 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15930 IPR000847 Transcription regulator HTH, LysR CLH39_15930 IPR005119 LysR, substrate-binding CLH39_15945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_15945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_15945 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_15945 IPR003660 HAMP domain CLH39_15945 IPR005467 Histidine kinase domain CLH39_15945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_15950 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_15950 IPR039420 Transcriptional regulatory protein WalR-like CLH39_15950 IPR001867 OmpR/PhoB-type DNA-binding domain CLH39_15950 IPR011006 CheY-like superfamily CLH39_15950 IPR001789 Signal transduction response regulator, receiver domain CLH39_15950 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_15965 IPR020845 AMP-binding, conserved site CLH39_15965 IPR000873 AMP-dependent synthetase/ligase CLH39_15965 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_15965 IPR042099 AMP-dependent synthetase-like superfamily CLH39_15970 IPR003593 AAA+ ATPase domain CLH39_15970 IPR005670 Phosphate transport system permease protein 1 CLH39_15970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_15970 IPR015850 ABC transporter, phosphate import, PstB CLH39_15970 IPR003439 ABC transporter-like CLH39_15970 IPR017871 ABC transporter, conserved site CLH39_15975 IPR035906 MetI-like superfamily CLH39_15975 IPR005672 Phosphate transport system permease protein PstA CLH39_15975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_15980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_15980 IPR035906 MetI-like superfamily CLH39_15980 IPR011864 Phosphate ABC transporter, permease protein PstC CLH39_15985 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CLH39_15985 IPR024370 PBP domain CLH39_15990 IPR036830 Polyphosphate kinase middle domain superfamily CLH39_15990 IPR024953 Polyphosphate kinase middle domain CLH39_15990 IPR041108 Polyphosphate kinase, C-terminal domain 1 CLH39_15990 IPR003414 Polyphosphate kinase CLH39_15990 IPR025198 Polyphosphate kinase N-terminal domain CLH39_15990 IPR036832 Polyphosphate kinase N-terminal domain superfamily CLH39_15990 IPR025200 Polyphosphate kinase C-terminal domain 2 CLH39_15995 IPR003695 Ppx/GppA phosphatase CLH39_15995 IPR030673 Pyrophosphatase, GppA/Ppx-type CLH39_15995 IPR022371 Exopolyphosphatase CLH39_16005 IPR006352 Phosphoglucosamine mutase, bacterial type CLH39_16005 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLH39_16005 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLH39_16005 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CLH39_16005 IPR016066 Alpha-D-phosphohexomutase, conserved site CLH39_16005 IPR005841 Alpha-D-phosphohexomutase superfamily CLH39_16005 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLH39_16005 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLH39_16005 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLH39_16010 IPR000489 Pterin-binding domain CLH39_16010 IPR011005 Dihydropteroate synthase-like CLH39_16010 IPR006390 Dihydropteroate synthase CLH39_16015 IPR003960 ATPase, AAA-type, conserved site CLH39_16015 IPR005936 Peptidase, FtsH CLH39_16015 IPR003593 AAA+ ATPase domain CLH39_16015 IPR003959 ATPase, AAA-type, core CLH39_16015 IPR000642 Peptidase M41 CLH39_16015 IPR041569 AAA ATPase, AAA+ lid domain CLH39_16015 IPR037219 Peptidase M41-like CLH39_16015 IPR011546 Peptidase M41, FtsH extracellular CLH39_16015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_16020 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CLH39_16020 IPR015507 Ribosomal RNA large subunit methyltransferase E CLH39_16025 IPR017924 RNA-binding protein YhbY CLH39_16025 IPR035920 YhbY-like superfamily CLH39_16025 IPR001890 RNA-binding, CRM domain CLH39_16030 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CLH39_16030 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLH39_16030 IPR006359 Transcription elongation factor GreA CLH39_16030 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CLH39_16030 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CLH39_16030 IPR023459 Transcription elongation factor GreA/GreB family CLH39_16030 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLH39_16030 IPR028624 Transcription elongation factor GreA/GreB CLH39_16040 IPR019918 Pyrimidine permease RutG, predicted CLH39_16040 IPR006042 Xanthine/uracil permease CLH39_16040 IPR006043 Xanthine/uracil/vitamin C permease CLH39_16045 IPR013078 Histidine phosphatase superfamily, clade-1 CLH39_16045 IPR029033 Histidine phosphatase superfamily CLH39_16045 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CLH39_16045 IPR023086 Phosphoglycerate mutase, GpmB, probable CLH39_16050 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLH39_16050 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_16050 IPR036291 NAD(P)-binding domain superfamily CLH39_16050 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_16060 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLH39_16060 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CLH39_16060 IPR011761 ATP-grasp fold CLH39_16060 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CLH39_16060 IPR011607 Methylglyoxal synthase-like domain CLH39_16060 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CLH39_16060 IPR006275 Carbamoyl-phosphate synthase, large subunit CLH39_16060 IPR036914 Methylglyoxal synthase-like domain superfamily CLH39_16060 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CLH39_16060 IPR016185 Pre-ATP-grasp domain superfamily CLH39_16065 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CLH39_16065 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CLH39_16065 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CLH39_16065 IPR029062 Class I glutamine amidotransferase-like CLH39_16065 IPR006274 Carbamoyl-phosphate synthase, small subunit CLH39_16065 IPR017926 Glutamine amidotransferase CLH39_16070 IPR018225 Transaldolase, active site CLH39_16070 IPR004730 Transaldolase type 1 CLH39_16070 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CLH39_16070 IPR013785 Aldolase-type TIM barrel CLH39_16075 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLH39_16075 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLH39_16080 IPR012910 TonB-dependent receptor, plug domain CLH39_16080 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_16080 IPR039423 TonB-dependent receptor-like CLH39_16080 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_16080 IPR010916 TonB box, conserved site CLH39_16080 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CLH39_16080 IPR010105 TonB-dependent siderophore receptor CLH39_16080 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_16080 IPR010917 TonB-dependent receptor, conserved site CLH39_16095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_16095 IPR035906 MetI-like superfamily CLH39_16100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16100 IPR003439 ABC transporter-like CLH39_16100 IPR003593 AAA+ ATPase domain CLH39_16105 IPR015168 SsuA/THI5-like CLH39_16110 IPR006171 TOPRIM domain CLH39_16110 IPR023628 Recombination protein RecR, C4-type zinc finger CLH39_16110 IPR023627 Recombination protein RecR CLH39_16110 IPR034137 RecR, TOPRIM domain CLH39_16110 IPR000093 DNA recombination protein RecR CLH39_16115 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CLH39_16115 IPR004401 Nucleoid-associated protein YbaB/EbfC family CLH39_16120 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CLH39_16120 IPR021029 DNA polymerase III, tau subunit, domain V CLH39_16120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16120 IPR012763 DNA polymerase III, subunit gamma/ tau CLH39_16120 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLH39_16120 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CLH39_16120 IPR022754 DNA polymerase III, gamma subunit, domain III CLH39_16120 IPR001270 ClpA/B family CLH39_16120 IPR003593 AAA+ ATPase domain CLH39_16130 IPR034739 UvrD/AddA helicase, N-terminal CLH39_16130 IPR014017 UvrD-like DNA helicase, C-terminal CLH39_16130 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CLH39_16130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16130 IPR011335 Restriction endonuclease type II-like CLH39_16130 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLH39_16130 IPR000212 DNA helicase, UvrD/REP type CLH39_16130 IPR014016 UvrD-like helicase, ATP-binding domain CLH39_16130 IPR014152 DNA helicase subunit AddA CLH39_16140 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_16140 IPR004606 Molybdenum-pterin binding CLH39_16140 IPR005116 Transport-associated OB, type 1 CLH39_16140 IPR000847 Transcription regulator HTH, LysR CLH39_16140 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16140 IPR036390 Winged helix DNA-binding domain superfamily CLH39_16140 IPR003725 Molybdenum-binding protein ModE, N-terminal CLH39_16140 IPR016462 Molybdate-dependent transcriptional regulator ModE CLH39_16145 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_16145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16145 IPR005116 Transport-associated OB, type 1 CLH39_16145 IPR003593 AAA+ ATPase domain CLH39_16145 IPR005666 Sulphate transport system permease protein 1 CLH39_16145 IPR017871 ABC transporter, conserved site CLH39_16145 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CLH39_16145 IPR003439 ABC transporter-like CLH39_16150 IPR011867 Molybdate ABC transporter, permease protein CLH39_16150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_16150 IPR035906 MetI-like superfamily CLH39_16155 IPR005950 Molybdate ABC transporter, substrate-binding protein CLH39_16160 IPR011932 Tyrosine recombinase XerD CLH39_16160 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLH39_16160 IPR013762 Integrase-like, catalytic domain superfamily CLH39_16160 IPR002104 Integrase, catalytic domain CLH39_16160 IPR023009 Tyrosine recombinase XerC/XerD CLH39_16160 IPR010998 Integrase/recombinase, N-terminal CLH39_16160 IPR004107 Integrase, SAM-like, N-terminal CLH39_16165 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CLH39_16165 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CLH39_16165 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLH39_16170 IPR011701 Major facilitator superfamily CLH39_16170 IPR020846 Major facilitator superfamily domain CLH39_16170 IPR036259 MFS transporter superfamily CLH39_16170 IPR004737 Nitrate transporter CLH39_16180 IPR016040 NAD(P)-binding domain CLH39_16180 IPR036291 NAD(P)-binding domain superfamily CLH39_16185 IPR002577 Helix-turn-helix, HxlR type CLH39_16185 IPR036390 Winged helix DNA-binding domain superfamily CLH39_16185 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16215 IPR004682 TRAP transporter solute receptor, DctP family CLH39_16215 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_16215 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_16225 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_16225 IPR004681 TRAP transporter large membrane protein DctM CLH39_16235 IPR002220 DapA-like CLH39_16235 IPR020625 Schiff base-forming aldolase, active site CLH39_16235 IPR020624 Schiff base-forming aldolase, conserved site CLH39_16235 IPR013785 Aldolase-type TIM barrel CLH39_16235 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLH39_16240 IPR015590 Aldehyde dehydrogenase domain CLH39_16240 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_16240 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_16240 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_16240 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_16240 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_16245 IPR036390 Winged helix DNA-binding domain superfamily CLH39_16245 IPR000847 Transcription regulator HTH, LysR CLH39_16245 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16245 IPR012787 Pca transcription factor PcaQ CLH39_16245 IPR005119 LysR, substrate-binding CLH39_16250 IPR015884 Malic enzyme, conserved site CLH39_16250 IPR042113 Phosphate acetyltransferase, domain 1 CLH39_16250 IPR012188 NAD(P)-dependent malic enzyme CLH39_16250 IPR012302 Malic enzyme, NAD-binding CLH39_16250 IPR036291 NAD(P)-binding domain superfamily CLH39_16250 IPR042112 Phosphate acetyltransferase, domain 2 CLH39_16250 IPR012301 Malic enzyme, N-terminal domain CLH39_16250 IPR002505 Phosphate acetyl/butaryl transferase CLH39_16250 IPR037062 Malic enzyme, N-terminal domain superfamily CLH39_16255 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_16255 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CLH39_16255 IPR001173 Glycosyltransferase 2-like CLH39_16290 IPR042100 Bordetella uptake gene, domain 1 CLH39_16290 IPR005064 Bordetella uptake gene CLH39_16300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16300 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CLH39_16305 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_16305 IPR021731 AMIN domain CLH39_16305 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CLH39_16310 IPR032818 DedA family CLH39_16310 IPR032816 SNARE associated Golgi protein CLH39_16315 IPR014790 MutL, C-terminal, dimerisation CLH39_16315 IPR042121 MutL, C-terminal domain, regulatory subdomain CLH39_16315 IPR042120 MutL, C-terminal domain, dimerisation subdomain CLH39_16315 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CLH39_16315 IPR037198 MutL, C-terminal domain superfamily CLH39_16315 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_16315 IPR013507 DNA mismatch repair protein, S5 domain 2-like CLH39_16315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_16315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_16315 IPR002099 DNA mismatch repair protein family, N-terminal CLH39_16315 IPR020667 DNA mismatch repair protein, MutL CLH39_16315 IPR014762 DNA mismatch repair, conserved site CLH39_16320 IPR039657 Dimethylallyltransferase CLH39_16320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16320 IPR018022 IPP transferase CLH39_16325 IPR012681 Nucleobase cation symporter-1, NCS1 CLH39_16325 IPR001248 Purine-cytosine permease CLH39_16325 IPR038271 Purine-cytosine permease superfamily CLH39_16335 IPR010918 PurM-like, C-terminal domain CLH39_16335 IPR036676 PurM-like, C-terminal domain superfamily CLH39_16335 IPR016188 PurM-like, N-terminal domain CLH39_16335 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CLH39_16335 IPR036921 PurM-like, N-terminal domain superfamily CLH39_16340 IPR003593 AAA+ ATPase domain CLH39_16340 IPR001957 Chromosomal replication control, initiator DnaA CLH39_16340 IPR020591 Chromosomal replication control, initiator DnaA-like CLH39_16340 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CLH39_16340 IPR013317 Chromosomal replication initiator protein DnaA CLH39_16340 IPR013159 Chromosomal replication initiator, DnaA C-terminal CLH39_16340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16340 IPR010921 Trp repressor/replication initiator CLH39_16350 IPR010206 Poly(A) polymerase I CLH39_16350 IPR025866 Polymerase A arginine-rich C-terminal domain CLH39_16350 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CLH39_16350 IPR002646 Poly A polymerase, head domain CLH39_16355 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CLH39_16355 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CLH39_16360 IPR036895 Uracil-DNA glycosylase-like domain superfamily CLH39_16360 IPR005122 Uracil-DNA glycosylase-like CLH39_16360 IPR005273 Uracil-DNA glycosylase family 4 CLH39_16375 IPR023495 Sugar efflux transporter, putative CLH39_16375 IPR036259 MFS transporter superfamily CLH39_16375 IPR020846 Major facilitator superfamily domain CLH39_16375 IPR011701 Major facilitator superfamily CLH39_16385 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLH39_16385 IPR001647 DNA-binding HTH domain, TetR-type CLH39_16385 IPR009057 Homeobox-like domain superfamily CLH39_16390 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CLH39_16390 IPR011167 Iron-dependent fumarate hydratase CLH39_16390 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CLH39_16390 IPR020557 Fumarate lyase, conserved site CLH39_16390 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CLH39_16395 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_16395 IPR022852 Carnitinyl-CoA dehydratase CLH39_16395 IPR014748 Enoyl-CoA hydratase, C-terminal CLH39_16395 IPR029045 ClpP/crotonase-like domain superfamily CLH39_16395 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_16400 IPR002310 Glycine-tRNA ligase, alpha subunit CLH39_16400 IPR006194 Glycine-tRNA synthetase, heterodimeric CLH39_16405 IPR015944 Glycine-tRNA ligase, beta subunit CLH39_16405 IPR008909 DALR anticodon binding CLH39_16405 IPR006194 Glycine-tRNA synthetase, heterodimeric CLH39_16410 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CLH39_16410 IPR036412 HAD-like superfamily CLH39_16410 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CLH39_16410 IPR006543 Histidinol-phosphate phosphatase CLH39_16410 IPR023214 HAD superfamily CLH39_16415 IPR002123 Phospholipid/glycerol acyltransferase CLH39_16415 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CLH39_16425 IPR018146 Glyoxalase I, conserved site CLH39_16425 IPR004361 Glyoxalase I CLH39_16425 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLH39_16425 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLH39_16425 IPR037523 Vicinal oxygen chelate (VOC) domain CLH39_16430 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CLH39_16435 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CLH39_16435 IPR011530 Ribosomal RNA adenine dimethylase CLH39_16435 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CLH39_16435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_16435 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CLH39_16435 IPR023165 rRNA adenine dimethylase-like CLH39_16440 IPR027304 Trigger factor/SurA domain superfamily CLH39_16440 IPR015391 SurA N-terminal CLH39_16440 IPR023034 Peptidyl-prolyl isomerase SurA CLH39_16440 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLH39_16445 IPR007543 LptD, C-terminal CLH39_16445 IPR020889 LPS-assembly protein LptD CLH39_16450 IPR002575 Aminoglycoside phosphotransferase CLH39_16450 IPR011009 Protein kinase-like domain superfamily CLH39_16455 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_16455 IPR005835 Nucleotidyl transferase domain CLH39_16465 IPR003439 ABC transporter-like CLH39_16465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16465 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_16465 IPR017871 ABC transporter, conserved site CLH39_16465 IPR003593 AAA+ ATPase domain CLH39_16470 IPR035906 MetI-like superfamily CLH39_16470 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_16470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_16475 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_16475 IPR001320 Ionotropic glutamate receptor CLH39_16475 IPR018313 Solute-binding protein family 3, conserved site CLH39_16480 IPR004872 Lipoprotein NlpA family CLH39_16485 IPR035906 MetI-like superfamily CLH39_16485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_16490 IPR026253 Methionine import ATP-binding protein MetN CLH39_16490 IPR017871 ABC transporter, conserved site CLH39_16490 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CLH39_16490 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CLH39_16490 IPR018449 NIL domain CLH39_16490 IPR003593 AAA+ ATPase domain CLH39_16490 IPR003439 ABC transporter-like CLH39_16490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16505 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CLH39_16505 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CLH39_16505 IPR008471 MnmC-like methyltransferase CLH39_16505 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_16505 IPR006076 FAD dependent oxidoreductase CLH39_16510 IPR022337 Inositol monophosphatase, SuhB CLH39_16510 IPR020550 Inositol monophosphatase, conserved site CLH39_16510 IPR000760 Inositol monophosphatase-like CLH39_16510 IPR020583 Inositol monophosphatase, metal-binding site CLH39_16510 IPR033942 Inositol monophosphatase CLH39_16515 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_16515 IPR020845 AMP-binding, conserved site CLH39_16515 IPR000873 AMP-dependent synthetase/ligase CLH39_16515 IPR042099 AMP-dependent synthetase-like superfamily CLH39_16520 IPR002933 Peptidase M20 CLH39_16520 IPR011650 Peptidase M20, dimerisation domain CLH39_16520 IPR017439 Amidohydrolase CLH39_16520 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_16525 IPR006683 Thioesterase domain CLH39_16525 IPR029069 HotDog domain superfamily CLH39_16525 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CLH39_16525 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CLH39_16530 IPR038048 Magnesium transporter MgtE, transmembrane domain CLH39_16530 IPR000644 CBS domain CLH39_16530 IPR006668 Magnesium transporter, MgtE intracellular domain CLH39_16530 IPR038076 MgtE, N-terminal domain superfamily CLH39_16530 IPR006669 Magnesium transporter MgtE CLH39_16530 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CLH39_16530 IPR006667 SLC41 divalent cation transporters, integral membrane domain CLH39_16540 IPR014018 SecA motor DEAD CLH39_16540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16540 IPR000185 Protein translocase subunit SecA CLH39_16540 IPR020937 SecA conserved site CLH39_16540 IPR036266 SecA, Wing/Scaffold superfamily CLH39_16540 IPR011116 SecA Wing/Scaffold CLH39_16540 IPR011130 SecA, preprotein cross-linking domain CLH39_16540 IPR011115 SecA DEAD-like, N-terminal CLH39_16540 IPR036670 SecA, preprotein cross-linking domain superfamily CLH39_16540 IPR004027 SEC-C motif CLH39_16545 IPR023346 Lysozyme-like domain superfamily CLH39_16545 IPR011055 Duplicated hybrid motif CLH39_16545 IPR010090 Phage tail tape measure protein CLH39_16545 IPR016047 Peptidase M23 CLH39_16545 IPR008258 Transglycosylase SLT domain 1 CLH39_16545 IPR000189 Prokaryotic transglycosylase, active site CLH39_16555 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_16555 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CLH39_16555 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CLH39_16555 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CLH39_16560 IPR000158 Cell division protein FtsZ CLH39_16560 IPR024757 Cell division protein FtsZ, C-terminal CLH39_16560 IPR003008 Tubulin/FtsZ, GTPase domain CLH39_16560 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CLH39_16560 IPR020805 Cell division protein FtsZ, conserved site CLH39_16560 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLH39_16560 IPR008280 Tubulin/FtsZ, C-terminal CLH39_16565 IPR003494 SHS2 domain inserted in FtsA CLH39_16565 IPR020823 Cell division protein FtsA CLH39_16570 IPR005548 Cell division protein FtsQ/DivIB CLH39_16570 IPR026579 Cell division protein FtsQ CLH39_16570 IPR034746 POTRA domain CLH39_16570 IPR013685 POTRA domain, FtsQ-type CLH39_16575 IPR016185 Pre-ATP-grasp domain superfamily CLH39_16575 IPR011761 ATP-grasp fold CLH39_16575 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CLH39_16575 IPR005905 D-alanine--D-alanine ligase CLH39_16575 IPR013815 ATP-grasp fold, subdomain 1 CLH39_16575 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CLH39_16575 IPR011095 D-alanine--D-alanine ligase, C-terminal CLH39_16580 IPR013221 Mur ligase, central CLH39_16580 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CLH39_16580 IPR000713 Mur ligase, N-terminal catalytic domain CLH39_16580 IPR004101 Mur ligase, C-terminal CLH39_16580 IPR036565 Mur-like, catalytic domain superfamily CLH39_16580 IPR036615 Mur ligase, C-terminal domain superfamily CLH39_16585 IPR006009 N-acetylglucosaminyltransferase, MurG CLH39_16585 IPR007235 Glycosyl transferase, family 28, C-terminal CLH39_16585 IPR004276 Glycosyltransferase family 28, N-terminal domain CLH39_16590 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CLH39_16590 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CLH39_16595 IPR013221 Mur ligase, central CLH39_16595 IPR036615 Mur ligase, C-terminal domain superfamily CLH39_16595 IPR004101 Mur ligase, C-terminal CLH39_16595 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CLH39_16595 IPR036565 Mur-like, catalytic domain superfamily CLH39_16595 IPR018109 Folylpolyglutamate synthetase, conserved site CLH39_16600 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CLH39_16600 IPR000715 Glycosyl transferase, family 4 CLH39_16600 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CLH39_16605 IPR036565 Mur-like, catalytic domain superfamily CLH39_16605 IPR004101 Mur ligase, C-terminal CLH39_16605 IPR035911 MurE/MurF, N-terminal CLH39_16605 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CLH39_16605 IPR000713 Mur ligase, N-terminal catalytic domain CLH39_16605 IPR013221 Mur ligase, central CLH39_16605 IPR036615 Mur ligase, C-terminal domain superfamily CLH39_16610 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CLH39_16610 IPR001460 Penicillin-binding protein, transpeptidase CLH39_16610 IPR005311 Penicillin-binding protein, dimerisation domain CLH39_16610 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CLH39_16610 IPR012338 Beta-lactamase/transpeptidase-like CLH39_16615 IPR011922 Cell division protein FtsL CLH39_16620 IPR002903 Ribosomal RNA small subunit methyltransferase H CLH39_16620 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CLH39_16620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_16625 IPR035644 MraZ, C-terminal CLH39_16625 IPR020603 MraZ domain CLH39_16625 IPR003444 Transcriptional regulator MraZ CLH39_16625 IPR038619 MraZ superfamily CLH39_16625 IPR007159 SpoVT-AbrB domain CLH39_16625 IPR037914 SpoVT-AbrB domain superfamily CLH39_16625 IPR035642 MraZ, N-terminal CLH39_16635 IPR003593 AAA+ ATPase domain CLH39_16635 IPR032524 ABC transporter Uup, C-terminal CLH39_16635 IPR032781 ABC-transporter extension domain CLH39_16635 IPR003439 ABC transporter-like CLH39_16635 IPR017871 ABC transporter, conserved site CLH39_16635 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CLH39_16635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16640 IPR012675 Beta-grasp domain superfamily CLH39_16640 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_16640 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_16640 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_16645 IPR033909 Ribonucleotide reductase small subunit CLH39_16645 IPR009078 Ferritin-like superfamily CLH39_16645 IPR012348 Ribonucleotide reductase-like CLH39_16645 IPR030475 Ribonucleotide reductase small subunit, acitve site CLH39_16645 IPR000358 Ribonucleotide reductase small subunit family CLH39_16650 IPR013509 Ribonucleotide reductase large subunit, N-terminal CLH39_16650 IPR039718 Ribonucleoside-diphosphate reductase large subunit CLH39_16650 IPR005144 ATP-cone domain CLH39_16650 IPR013346 Ribonucleotide reductase, class I , alpha subunit CLH39_16650 IPR000788 Ribonucleotide reductase large subunit, C-terminal CLH39_16650 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CLH39_16655 IPR001650 Helicase, C-terminal CLH39_16655 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_16655 IPR018982 RQC domain CLH39_16655 IPR004589 DNA helicase, ATP-dependent, RecQ type CLH39_16655 IPR011545 DEAD/DEAH box helicase domain CLH39_16655 IPR010997 HRDC-like superfamily CLH39_16655 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CLH39_16655 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16655 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CLH39_16655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16655 IPR002121 HRDC domain CLH39_16665 IPR014743 Chloride channel, core CLH39_16665 IPR001807 Chloride channel, voltage gated CLH39_16665 IPR023790 Chloride channel, voltage-gated, ClcB CLH39_16670 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CLH39_16675 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CLH39_16680 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CLH39_16680 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CLH39_16680 IPR004514 Glutamine-tRNA synthetase CLH39_16680 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_16680 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CLH39_16680 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLH39_16680 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CLH39_16680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_16680 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLH39_16680 IPR022861 Glutamine-tRNA ligase, bacterial CLH39_16685 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CLH39_16685 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CLH39_16685 IPR013033 Septum formation inhibitor MinC CLH39_16685 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CLH39_16685 IPR007874 Septum formation inhibitor MinC, N-terminal CLH39_16685 IPR005526 Septum formation inhibitor MinC, C-terminal CLH39_16690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16690 IPR025501 ATP binding protein MinD CLH39_16690 IPR010223 ATP binding protein MinD, bacterial-type CLH39_16690 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLH39_16695 IPR005527 Cell division topological specificity factor MinE CLH39_16695 IPR036707 Cell division topological specificity factor MinE superfamily CLH39_16715 IPR017871 ABC transporter, conserved site CLH39_16715 IPR022374 Energy-dependent translational throttle protein EttA CLH39_16715 IPR003593 AAA+ ATPase domain CLH39_16715 IPR032781 ABC-transporter extension domain CLH39_16715 IPR003439 ABC transporter-like CLH39_16715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16725 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_16725 IPR001173 Glycosyltransferase 2-like CLH39_16730 IPR004602 UvrABC system subunit A CLH39_16730 IPR003439 ABC transporter-like CLH39_16730 IPR041552 UvrA DNA-binding domain CLH39_16730 IPR041102 UvrA, interaction domain CLH39_16730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_16730 IPR003593 AAA+ ATPase domain CLH39_16730 IPR017871 ABC transporter, conserved site CLH39_16735 IPR015890 Chorismate-utilising enzyme, C-terminal CLH39_16735 IPR019999 Anthranilate synthase component I-like CLH39_16735 IPR005801 ADC synthase CLH39_16735 IPR005802 Aminodeoxychorismate synthase, component I CLH39_16735 IPR006805 Anthranilate synthase component I, N-terminal CLH39_16745 IPR000594 THIF-type NAD/FAD binding fold CLH39_16745 IPR035985 Ubiquitin-activating enzyme CLH39_16755 IPR000659 Pyridoxamine 5'-phosphate oxidase CLH39_16755 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CLH39_16755 IPR012349 FMN-binding split barrel CLH39_16755 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CLH39_16755 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CLH39_16760 IPR036390 Winged helix DNA-binding domain superfamily CLH39_16760 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16760 IPR012349 FMN-binding split barrel CLH39_16760 IPR002563 Flavin reductase like domain CLH39_16765 IPR006076 FAD dependent oxidoreductase CLH39_16765 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_16765 IPR030862 L-2-hydroxyglutarate dehydrogenase CLH39_16770 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CLH39_16770 IPR036477 Formyl transferase, N-terminal domain superfamily CLH39_16770 IPR002912 ACT domain CLH39_16770 IPR004810 Formyltetrahydrofolate deformylase CLH39_16770 IPR002376 Formyl transferase, N-terminal CLH39_16775 IPR029055 Nucleophile aminohydrolases, N-terminal CLH39_16775 IPR000101 Gamma-glutamyltranspeptidase CLH39_16780 IPR000847 Transcription regulator HTH, LysR CLH39_16780 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 CLH39_16780 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16780 IPR036390 Winged helix DNA-binding domain superfamily CLH39_16780 IPR005119 LysR, substrate-binding CLH39_16785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_16785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_16785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_16785 IPR006089 Acyl-CoA dehydrogenase, conserved site CLH39_16785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_16785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_16785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_16790 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_16790 IPR029069 HotDog domain superfamily CLH39_16790 IPR015590 Aldehyde dehydrogenase domain CLH39_16790 IPR002539 MaoC-like dehydratase domain CLH39_16790 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_16790 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_16790 IPR011966 Phenylacetic acid degradation protein PaaN CLH39_16795 IPR000639 Epoxide hydrolase-like CLH39_16795 IPR000073 Alpha/beta hydrolase fold-1 CLH39_16795 IPR029058 Alpha/Beta hydrolase fold CLH39_16800 IPR005145 Putative GTP-binding controlling metal-binding domain CLH39_16800 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CLH39_16800 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily CLH39_16800 IPR006070 YrdC-like domain CLH39_16800 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CLH39_16805 IPR013815 ATP-grasp fold, subdomain 1 CLH39_16805 IPR011054 Rudiment single hybrid motif CLH39_16805 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CLH39_16805 IPR011761 ATP-grasp fold CLH39_16805 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CLH39_16805 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CLH39_16805 IPR016185 Pre-ATP-grasp domain superfamily CLH39_16810 IPR000031 PurE domain CLH39_16810 IPR033747 Class I PurE CLH39_16810 IPR024694 PurE, prokaryotic type CLH39_16810 IPR035893 PurE domain superfamily CLH39_16815 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CLH39_16815 IPR018236 SAICAR synthetase, conserved site CLH39_16815 IPR028923 SAICAR synthetase/ADE2, N-terminal CLH39_16820 IPR013785 Aldolase-type TIM barrel CLH39_16820 IPR000771 Fructose-bisphosphate aldolase, class-II CLH39_16820 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype CLH39_16825 IPR001453 MoaB/Mog domain CLH39_16825 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLH39_16825 IPR036425 MoaB/Mog-like domain superfamily CLH39_16830 IPR036291 NAD(P)-binding domain superfamily CLH39_16830 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_16830 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_16835 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_16835 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_16835 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_16835 IPR015590 Aldehyde dehydrogenase domain CLH39_16835 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_16850 IPR036043 Phosphoglycerate kinase superfamily CLH39_16850 IPR015911 Phosphoglycerate kinase, conserved site CLH39_16850 IPR001576 Phosphoglycerate kinase CLH39_16850 IPR015824 Phosphoglycerate kinase, N-terminal CLH39_16855 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CLH39_16855 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CLH39_16855 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CLH39_16855 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CLH39_16855 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CLH39_16855 IPR036291 NAD(P)-binding domain superfamily CLH39_16860 IPR005475 Transketolase-like, pyrimidine-binding domain CLH39_16860 IPR029061 Thiamin diphosphate-binding fold CLH39_16860 IPR020826 Transketolase binding site CLH39_16860 IPR033248 Transketolase, C-terminal domain CLH39_16860 IPR033247 Transketolase family CLH39_16860 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CLH39_16860 IPR005474 Transketolase, N-terminal CLH39_16860 IPR005478 Transketolase, bacterial-like CLH39_16865 IPR015947 PUA-like superfamily CLH39_16865 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLH39_16865 IPR006700 Ribosomal RNA small subunit methyltransferase E CLH39_16865 IPR029028 Alpha/beta knot methyltransferases CLH39_16870 IPR000468 Barstar (barnase inhibitor) CLH39_16870 IPR035905 Barstar-like superfamily CLH39_16880 IPR002505 Phosphate acetyl/butaryl transferase CLH39_16880 IPR042112 Phosphate acetyltransferase, domain 2 CLH39_16880 IPR042113 Phosphate acetyltransferase, domain 1 CLH39_16880 IPR036291 NAD(P)-binding domain superfamily CLH39_16880 IPR015884 Malic enzyme, conserved site CLH39_16880 IPR012301 Malic enzyme, N-terminal domain CLH39_16880 IPR012188 NAD(P)-dependent malic enzyme CLH39_16880 IPR012302 Malic enzyme, NAD-binding CLH39_16880 IPR037062 Malic enzyme, N-terminal domain superfamily CLH39_16890 IPR004839 Aminotransferase, class I/classII CLH39_16890 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLH39_16890 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_16890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_16895 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A CLH39_16895 IPR023346 Lysozyme-like domain superfamily CLH39_16895 IPR008258 Transglycosylase SLT domain 1 CLH39_16895 IPR000189 Prokaryotic transglycosylase, active site CLH39_16900 IPR023677 UbiD decarboxylyase, bacteria CLH39_16900 IPR002830 UbiD decarboxylyase family CLH39_16905 IPR037523 Vicinal oxygen chelate (VOC) domain CLH39_16905 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLH39_16905 IPR018146 Glyoxalase I, conserved site CLH39_16905 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLH39_16905 IPR004361 Glyoxalase I CLH39_16910 IPR000847 Transcription regulator HTH, LysR CLH39_16910 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16910 IPR036390 Winged helix DNA-binding domain superfamily CLH39_16910 IPR005119 LysR, substrate-binding CLH39_16915 IPR015041 Osmosensory transporter coiled coil CLH39_16915 IPR004736 MFS transporter, metabolite:H symporter CLH39_16915 IPR036259 MFS transporter superfamily CLH39_16915 IPR005828 Major facilitator, sugar transporter-like CLH39_16915 IPR020846 Major facilitator superfamily domain CLH39_16915 IPR005829 Sugar transporter, conserved site CLH39_16915 IPR036292 Proline/betaine transporter ProP, C-terminal CLH39_16925 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLH39_16925 IPR036928 Amidase signature (AS) superfamily CLH39_16925 IPR023631 Amidase signature domain CLH39_16925 IPR020556 Amidase, conserved site CLH39_16925 IPR000120 Amidase CLH39_16940 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase CLH39_16940 IPR036291 NAD(P)-binding domain superfamily CLH39_16945 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_16945 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_16945 IPR017938 Riboflavin synthase-like beta-barrel CLH39_16945 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_16945 IPR000951 Phthalate dioxygenase reductase CLH39_16945 IPR012675 Beta-grasp domain superfamily CLH39_16945 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_16945 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_16945 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_16955 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_16955 IPR000847 Transcription regulator HTH, LysR CLH39_16955 IPR005119 LysR, substrate-binding CLH39_16955 IPR011781 D-serine deaminase transcriptional activator CLH39_16955 IPR036390 Winged helix DNA-binding domain superfamily CLH39_16970 IPR010279 Inner membrane protein YqjD/ElaB CLH39_16980 IPR029057 Phosphoribosyltransferase-like CLH39_16980 IPR000836 Phosphoribosyltransferase domain CLH39_16980 IPR005765 Uracil phosphoribosyl transferase CLH39_16980 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CLH39_16985 IPR012338 Beta-lactamase/transpeptidase-like CLH39_16985 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CLH39_16990 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CLH39_16990 IPR042119 QueA, domain 2 CLH39_16990 IPR042118 QueA, domain 1 CLH39_16990 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CLH39_16995 IPR004803 tRNA-guanine transglycosylase CLH39_16995 IPR002616 tRNA-guanine(15) transglycosylase-like CLH39_16995 IPR036511 Queuine tRNA-ribosyltransferase-like CLH39_17000 IPR003849 Preprotein translocase YajC CLH39_17005 IPR027398 SecD export protein N-terminal TM domain CLH39_17005 IPR005791 Protein translocase subunit SecD CLH39_17005 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLH39_17005 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLH39_17005 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLH39_17010 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLH39_17010 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLH39_17010 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLH39_17010 IPR005665 Protein-export membrane protein SecF, bacterial CLH39_17015 IPR036005 Creatinase/aminopeptidase-like CLH39_17015 IPR000994 Peptidase M24 CLH39_17015 IPR001714 Peptidase M24, methionine aminopeptidase CLH39_17015 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLH39_17025 IPR020612 Methylthiotransferase, conserved site CLH39_17025 IPR005839 Methylthiotransferase CLH39_17025 IPR013848 Methylthiotransferase, N-terminal CLH39_17025 IPR038135 Methylthiotransferase, N-terminal domain superfamily CLH39_17025 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CLH39_17025 IPR007197 Radical SAM CLH39_17025 IPR023404 Radical SAM, alpha/beta horseshoe CLH39_17025 IPR006638 Elp3/MiaB/NifB CLH39_17025 IPR002792 TRAM domain CLH39_17030 IPR003714 PhoH-like protein CLH39_17030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17035 IPR020549 Endoribonuclease YbeY, conserved site CLH39_17035 IPR002036 Endoribonuclease YbeY CLH39_17035 IPR023091 Metalloprotease catalytic domain superfamily, predicted CLH39_17040 IPR005170 Transporter-associated domain CLH39_17040 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_17040 IPR000644 CBS domain CLH39_17040 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_17045 IPR003010 Carbon-nitrogen hydrolase CLH39_17045 IPR036526 Carbon-nitrogen hydrolase superfamily CLH39_17045 IPR004563 Apolipoprotein N-acyltransferase CLH39_17050 IPR005330 MHYT domain CLH39_17050 IPR029787 Nucleotide cyclase CLH39_17050 IPR001633 EAL domain CLH39_17050 IPR035919 EAL domain superfamily CLH39_17050 IPR000160 GGDEF domain CLH39_17085 IPR011701 Major facilitator superfamily CLH39_17085 IPR020846 Major facilitator superfamily domain CLH39_17085 IPR036259 MFS transporter superfamily CLH39_17090 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_17090 IPR011990 Tetratricopeptide-like helical domain superfamily CLH39_17090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17090 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17090 IPR000792 Transcription regulator LuxR, C-terminal CLH39_17100 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CLH39_17100 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CLH39_17105 IPR022831 Multidrug resistance protein MdtB CLH39_17105 IPR001036 Acriflavin resistance protein CLH39_17105 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CLH39_17115 IPR029069 HotDog domain superfamily CLH39_17115 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CLH39_17120 IPR024177 Biotin synthase CLH39_17120 IPR010722 Biotin and thiamin synthesis-associated domain CLH39_17120 IPR007197 Radical SAM CLH39_17120 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CLH39_17120 IPR013785 Aldolase-type TIM barrel CLH39_17120 IPR006638 Elp3/MiaB/NifB CLH39_17140 IPR013766 Thioredoxin domain CLH39_17140 IPR013740 Redoxin CLH39_17140 IPR037944 Peroxiredoxin-5-like CLH39_17140 IPR036249 Thioredoxin-like superfamily CLH39_17145 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_17145 IPR004681 TRAP transporter large membrane protein DctM CLH39_17150 IPR007387 TRAP transporter, small membrane protein DctQ CLH39_17155 IPR004682 TRAP transporter solute receptor, DctP family CLH39_17155 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_17155 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_17160 IPR001610 PAC motif CLH39_17160 IPR000014 PAS domain CLH39_17160 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CLH39_17160 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CLH39_17160 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_17160 IPR013767 PAS fold CLH39_17160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLH39_17160 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_17160 IPR000700 PAS-associated, C-terminal CLH39_17160 IPR005467 Histidine kinase domain CLH39_17160 IPR035965 PAS domain superfamily CLH39_17165 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17165 IPR011006 CheY-like superfamily CLH39_17165 IPR000792 Transcription regulator LuxR, C-terminal CLH39_17165 IPR001789 Signal transduction response regulator, receiver domain CLH39_17170 IPR023045 Molybdenum cofactor biosynthesis C CLH39_17170 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CLH39_17170 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CLH39_17180 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CLH39_17180 IPR003448 Molybdopterin biosynthesis MoaE CLH39_17185 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLH39_17185 IPR036425 MoaB/Mog-like domain superfamily CLH39_17185 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CLH39_17185 IPR001453 MoaB/Mog domain CLH39_17185 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria CLH39_17190 IPR001453 MoaB/Mog domain CLH39_17190 IPR036135 MoeA, N-terminal and linker domain superfamily CLH39_17190 IPR036425 MoaB/Mog-like domain superfamily CLH39_17190 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLH39_17190 IPR038987 Molybdopterin biosynthesis protein MoeA-like CLH39_17190 IPR005111 MoeA, C-terminal, domain IV CLH39_17190 IPR005110 MoeA, N-terminal and linker domain CLH39_17190 IPR036688 MoeA, C-terminal, domain IV superfamily CLH39_17195 IPR025877 MobA-like NTP transferase CLH39_17195 IPR013482 Molybdenum cofactor guanylyltransferase CLH39_17195 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_17200 IPR006638 Elp3/MiaB/NifB CLH39_17200 IPR010505 Molybdenum cofactor synthesis C-terminal CLH39_17200 IPR013483 Molybdenum cofactor biosynthesis protein A CLH39_17200 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CLH39_17200 IPR013785 Aldolase-type TIM barrel CLH39_17200 IPR007197 Radical SAM CLH39_17205 IPR041657 Helix-turn-helix domain, group 17 CLH39_17205 IPR024370 PBP domain CLH39_17205 IPR010093 SinI-like, DNA-binding domain CLH39_17205 IPR009061 Putative DNA-binding domain superfamily CLH39_17210 IPR042128 NuoE domain CLH39_17210 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CLH39_17210 IPR036249 Thioredoxin-like superfamily CLH39_17210 IPR002023 NADH-quinone oxidoreductase subunit E-like CLH39_17215 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CLH39_17215 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_17215 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_17215 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CLH39_17215 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CLH39_17215 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CLH39_17215 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CLH39_17220 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_17220 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CLH39_17220 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CLH39_17220 IPR006656 Molybdopterin oxidoreductase CLH39_17220 IPR006657 Molybdopterin dinucleotide-binding domain CLH39_17220 IPR006478 Formate dehydrogenase, alpha subunit CLH39_17220 IPR009010 Aspartate decarboxylase-like domain superfamily CLH39_17220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLH39_17220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLH39_17220 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_17220 IPR041924 Formate dehydrogenase H, N-terminal CLH39_17225 IPR003786 Sulfur carrier protein FdhD CLH39_17225 IPR016193 Cytidine deaminase-like CLH39_17235 IPR006015 Universal stress protein A family CLH39_17235 IPR006016 UspA CLH39_17245 IPR000182 GNAT domain CLH39_17245 IPR016181 Acyl-CoA N-acyltransferase CLH39_17265 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_17265 IPR001173 Glycosyltransferase 2-like CLH39_17270 IPR012292 Globin/Protoglobin CLH39_17270 IPR009050 Globin-like superfamily CLH39_17270 IPR001486 Truncated hemoglobin CLH39_17275 IPR000944 Transcription regulator Rrf2-type CLH39_17275 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17275 IPR030489 Transcription regulator Rrf2-type, conserved site CLH39_17275 IPR036390 Winged helix DNA-binding domain superfamily CLH39_17280 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLH39_17280 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLH39_17280 IPR036291 NAD(P)-binding domain superfamily CLH39_17280 IPR002912 ACT domain CLH39_17280 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLH39_17280 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLH39_17285 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CLH39_17285 IPR036909 Cytochrome c-like domain superfamily CLH39_17285 IPR004852 Di-haem cytochrome c peroxidase CLH39_17285 IPR009056 Cytochrome c-like domain CLH39_17290 IPR003593 AAA+ ATPase domain CLH39_17290 IPR017871 ABC transporter, conserved site CLH39_17290 IPR003439 ABC transporter-like CLH39_17290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17290 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_17295 IPR003593 AAA+ ATPase domain CLH39_17295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17295 IPR017871 ABC transporter, conserved site CLH39_17295 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_17295 IPR003439 ABC transporter-like CLH39_17300 IPR001851 ABC transporter, permease CLH39_17300 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CLH39_17305 IPR001851 ABC transporter, permease CLH39_17325 IPR004026 Ada DNA repair, metal-binding CLH39_17325 IPR016221 Bifunctional regulatory protein Ada CLH39_17325 IPR009057 Homeobox-like domain superfamily CLH39_17325 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CLH39_17325 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CLH39_17325 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CLH39_17325 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLH39_17325 IPR018060 DNA binding HTH domain, AraC-type CLH39_17325 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17325 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CLH39_17325 IPR035451 Ada-like domain superfamily CLH39_17325 IPR018062 HTH domain AraC-type, conserved site CLH39_17330 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_17330 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_17330 IPR036291 NAD(P)-binding domain superfamily CLH39_17335 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CLH39_17340 IPR017560 Cytochrome c-type biogenesis protein CcmI CLH39_17340 IPR013026 Tetratricopeptide repeat-containing domain CLH39_17340 IPR011990 Tetratricopeptide-like helical domain superfamily CLH39_17340 IPR019734 Tetratricopeptide repeat CLH39_17345 IPR005616 CcmH/CycL/Ccl2/NrfF family CLH39_17345 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CLH39_17350 IPR013740 Redoxin CLH39_17350 IPR013766 Thioredoxin domain CLH39_17350 IPR017937 Thioredoxin, conserved site CLH39_17350 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CLH39_17350 IPR036249 Thioredoxin-like superfamily CLH39_17355 IPR003567 Cytochrome c-type biogenesis protein CLH39_17355 IPR003568 Cytochrome c-type biogenesis protein CcmF CLH39_17355 IPR002541 Cytochrome c assembly protein CLH39_17355 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CLH39_17360 IPR036127 CcmE-like superfamily CLH39_17360 IPR004329 CcmE/CycJ protein CLH39_17370 IPR003557 Cytochrome c-type biogenesis protein CcmC CLH39_17370 IPR002541 Cytochrome c assembly protein CLH39_17375 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CLH39_17375 IPR003544 Cytochrome c-type biogenesis protein CcmB CLH39_17380 IPR005895 ABC transporter, haem export, CcmA CLH39_17380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17380 IPR003439 ABC transporter-like CLH39_17380 IPR003593 AAA+ ATPase domain CLH39_17380 IPR017871 ABC transporter, conserved site CLH39_17390 IPR000847 Transcription regulator HTH, LysR CLH39_17390 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CLH39_17390 IPR005119 LysR, substrate-binding CLH39_17390 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17390 IPR036390 Winged helix DNA-binding domain superfamily CLH39_17395 IPR036874 Carbonic anhydrase superfamily CLH39_17395 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CLH39_17395 IPR001765 Carbonic anhydrase CLH39_17400 IPR005546 Autotransporter beta-domain CLH39_17400 IPR036709 Autotransporter beta-domain superfamily CLH39_17400 IPR001087 GDSL lipase/esterase CLH39_17400 IPR017186 Lipase, autotransporter EstA CLH39_17400 IPR008265 Lipase, GDSL, active site CLH39_17400 IPR006315 Outer membrane autotransporter barrel CLH39_17400 IPR036514 SGNH hydrolase superfamily CLH39_17410 IPR017871 ABC transporter, conserved site CLH39_17410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17410 IPR003593 AAA+ ATPase domain CLH39_17410 IPR032781 ABC-transporter extension domain CLH39_17410 IPR003439 ABC transporter-like CLH39_17415 IPR024172 Streptomycin 3''-adenylyltransferase CLH39_17415 IPR025184 Domain of unknown function DUF4111 CLH39_17415 IPR002934 Polymerase, nucleotidyl transferase domain CLH39_17430 IPR041706 YchF, N-terminal CLH39_17430 IPR023192 TGS-like domain superfamily CLH39_17430 IPR012676 TGS-like CLH39_17430 IPR004095 TGS CLH39_17430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17430 IPR006073 GTP binding domain CLH39_17430 IPR031167 OBG-type guanine nucleotide-binding (G) domain CLH39_17430 IPR013029 YchF, C-terminal domain CLH39_17430 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CLH39_17430 IPR012675 Beta-grasp domain superfamily CLH39_17440 IPR001328 Peptidyl-tRNA hydrolase CLH39_17440 IPR018171 Peptidyl-tRNA hydrolase, conserved site CLH39_17440 IPR036416 Peptidyl-tRNA hydrolase superfamily CLH39_17445 IPR029751 Ribosomal protein L25 CLH39_17445 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CLH39_17445 IPR020055 Ribosomal protein L25, short-form CLH39_17445 IPR001021 Ribosomal protein L25, long-form CLH39_17445 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CLH39_17445 IPR020057 Ribosomal protein L25, beta domain CLH39_17445 IPR037121 Ribosomal protein L25, C-terminal CLH39_17450 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CLH39_17450 IPR000836 Phosphoribosyltransferase domain CLH39_17450 IPR029057 Phosphoribosyltransferase-like CLH39_17450 IPR005946 Ribose-phosphate pyrophosphokinase CLH39_17450 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CLH39_17450 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CLH39_17460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLH39_17460 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CLH39_17460 IPR006204 GHMP kinase N-terminal domain CLH39_17460 IPR036554 GHMP kinase, C-terminal domain superfamily CLH39_17460 IPR013750 GHMP kinase, C-terminal domain CLH39_17460 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_17465 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLH39_17465 IPR004565 Outer membrane lipoprotein LolB CLH39_17475 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CLH39_17475 IPR010979 Ribosomal protein S13-like, H2TH CLH39_17475 IPR035937 MutM-like, N-terminal CLH39_17475 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CLH39_17475 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CLH39_17475 IPR020629 Formamidopyrimidine-DNA glycosylase CLH39_17475 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CLH39_17475 IPR010663 Zinc finger, FPG/IleRS-type CLH39_17485 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase CLH39_17485 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_17485 IPR002938 FAD-binding domain CLH39_17495 IPR005708 Homogentisate 1,2-dioxygenase CLH39_17495 IPR022950 Homogentisate 1,2-dioxygenase, bacterial CLH39_17495 IPR014710 RmlC-like jelly roll fold CLH39_17495 IPR011051 RmlC-like cupin domain superfamily CLH39_17500 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CLH39_17500 IPR011234 Fumarylacetoacetase-like, C-terminal CLH39_17510 IPR016164 FAD-linked oxidase-like, C-terminal CLH39_17510 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_17510 IPR006094 FAD linked oxidase, N-terminal CLH39_17510 IPR016166 FAD-binding domain, PCMH-type CLH39_17510 IPR004113 FAD-linked oxidase, C-terminal CLH39_17510 IPR004490 Glycolate oxidase subunit GlcD CLH39_17510 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLH39_17515 IPR005841 Alpha-D-phosphohexomutase superfamily CLH39_17515 IPR016066 Alpha-D-phosphohexomutase, conserved site CLH39_17515 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CLH39_17515 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLH39_17515 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLH39_17515 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLH39_17515 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLH39_17515 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLH39_17520 IPR001296 Glycosyl transferase, family 1 CLH39_17520 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLH39_17525 IPR031356 Stealth protein CR4, conserved region 4 CLH39_17525 IPR031357 Stealth protein CR3, conserved region 3 CLH39_17525 IPR031358 Stealth protein CR1, conserved region 1 CLH39_17525 IPR021520 Stealth protein CR2, conserved region 2 CLH39_17525 IPR001296 Glycosyl transferase, family 1 CLH39_17530 IPR001296 Glycosyl transferase, family 1 CLH39_17530 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CLH39_17540 IPR001509 NAD-dependent epimerase/dehydratase CLH39_17540 IPR036291 NAD(P)-binding domain superfamily CLH39_17545 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLH39_17545 IPR036291 NAD(P)-binding domain superfamily CLH39_17545 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_17545 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLH39_17545 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLH39_17545 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLH39_17545 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CLH39_17545 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CLH39_17550 IPR000715 Glycosyl transferase, family 4 CLH39_17555 IPR005119 LysR, substrate-binding CLH39_17555 IPR037416 Nodulation protein D, PBP2 CLH39_17555 IPR036390 Winged helix DNA-binding domain superfamily CLH39_17555 IPR000847 Transcription regulator HTH, LysR CLH39_17555 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17560 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase CLH39_17560 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 CLH39_17560 IPR002042 Uricase CLH39_17560 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily CLH39_17560 IPR019842 Uricase, conserved site CLH39_17565 IPR023525 Ureidoglycolate lyase, bacterial CLH39_17565 IPR007247 Ureidoglycolate lyase CLH39_17565 IPR011051 RmlC-like cupin domain superfamily CLH39_17565 IPR024060 Ureidoglycolate lyase domain superfamily CLH39_17570 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLH39_17570 IPR001303 Class II aldolase/adducin N-terminal CLH39_17575 IPR004370 4-oxalocrotonate tautomerase CLH39_17575 IPR014347 Tautomerase/MIF superfamily CLH39_17575 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CLH39_17580 IPR017588 Uric acid permease UacT-like CLH39_17580 IPR006042 Xanthine/uracil permease CLH39_17580 IPR006043 Xanthine/uracil/vitamin C permease CLH39_17590 IPR000847 Transcription regulator HTH, LysR CLH39_17590 IPR036390 Winged helix DNA-binding domain superfamily CLH39_17590 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17590 IPR005119 LysR, substrate-binding CLH39_17595 IPR029061 Thiamin diphosphate-binding fold CLH39_17595 IPR006397 Glyoxylate carboligase CLH39_17595 IPR029035 DHS-like NAD/FAD-binding domain superfamily CLH39_17595 IPR012000 Thiamine pyrophosphate enzyme, central domain CLH39_17595 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CLH39_17595 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLH39_17600 IPR013022 Xylose isomerase-like, TIM barrel domain CLH39_17600 IPR036237 Xylose isomerase-like superfamily CLH39_17600 IPR026040 Hydroxypyruvate isomerase-like CLH39_17600 IPR017643 Hydroxypyruvate isomerase CLH39_17605 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CLH39_17605 IPR036291 NAD(P)-binding domain superfamily CLH39_17605 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CLH39_17605 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CLH39_17605 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CLH39_17605 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_17605 IPR006398 2-hydroxy-3-oxopropionate reductase CLH39_17605 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_17610 IPR038614 Glycerate kinase, N-terminal domain superfamily CLH39_17610 IPR007835 MOFRL domain CLH39_17610 IPR025286 MOFRL-associated domain CLH39_17610 IPR039760 MOFRL domain-containing protein CLH39_17610 IPR037035 Glycerate kinase-like, C-terminal domain superfamily CLH39_17615 IPR038084 GlcG-like domain superfamily CLH39_17615 IPR005624 Haem-degrading CLH39_17620 IPR011037 Pyruvate kinase-like, insert domain superfamily CLH39_17620 IPR018209 Pyruvate kinase, active site CLH39_17620 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_17620 IPR015806 Pyruvate kinase, insert domain superfamily CLH39_17620 IPR015793 Pyruvate kinase, barrel CLH39_17620 IPR001697 Pyruvate kinase CLH39_17620 IPR040442 Pyruvate kinase-like domain superfamily CLH39_17620 IPR036918 Pyruvate kinase, C-terminal domain superfamily CLH39_17620 IPR015795 Pyruvate kinase, C-terminal CLH39_17625 IPR011566 Ubiquinone biosynthesis protein Coq7 CLH39_17625 IPR009078 Ferritin-like superfamily CLH39_17650 IPR000883 Cytochrome c oxidase subunit I CLH39_17650 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CLH39_17650 IPR023616 Cytochrome c oxidase-like, subunit I domain CLH39_17650 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CLH39_17650 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CLH39_17655 IPR036102 OsmC/Ohr superfamily CLH39_17655 IPR003718 OsmC/Ohr family CLH39_17655 IPR015946 K homology domain-like, alpha/beta CLH39_17660 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CLH39_17660 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CLH39_17660 IPR020940 Thymidylate synthase, active site CLH39_17660 IPR000398 Thymidylate synthase CLH39_17665 IPR012259 Dihydrofolate reductase CLH39_17665 IPR001796 Dihydrofolate reductase domain CLH39_17665 IPR017925 Dihydrofolate reductase conserved site CLH39_17665 IPR024072 Dihydrofolate reductase-like domain superfamily CLH39_17670 IPR000089 Biotin/lipoyl attachment CLH39_17670 IPR002930 Glycine cleavage system H-protein CLH39_17670 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLH39_17670 IPR033753 Glycine cleavage system H-protein/Simiate CLH39_17670 IPR017453 Glycine cleavage system H-protein, subgroup CLH39_17670 IPR011053 Single hybrid motif CLH39_17675 IPR023166 HI0933-like insert domain superfamily CLH39_17675 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_17675 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CLH39_17680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_17680 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CLH39_17680 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CLH39_17680 IPR000310 Orn/Lys/Arg decarboxylase, major domain CLH39_17680 IPR011193 Ornithine/lysine/arginine decarboxylase CLH39_17680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_17680 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_17680 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CLH39_17685 IPR029054 dUTPase-like CLH39_17685 IPR011962 dCTP deaminase CLH39_17685 IPR033704 dUTPase, trimeric CLH39_17685 IPR036157 dUTPase-like superfamily CLH39_17700 IPR019591 Mrp/NBP35 ATP-binding protein CLH39_17700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17700 IPR000808 Mrp, conserved site CLH39_17700 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CLH39_17710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_17710 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CLH39_17710 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CLH39_17710 IPR012340 Nucleic acid-binding, OB-fold CLH39_17710 IPR029038 Methionyl-tRNA synthetase, Zn-domain CLH39_17710 IPR033911 Methioninyl-tRNA synthetase core domain CLH39_17710 IPR015413 Methionyl/Leucyl tRNA synthetase CLH39_17710 IPR014758 Methionyl-tRNA synthetase CLH39_17710 IPR023458 Methionine-tRNA ligase, type 1 CLH39_17710 IPR002547 tRNA-binding domain CLH39_17710 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CLH39_17710 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLH39_17715 IPR027469 Cation efflux transmembrane domain superfamily CLH39_17715 IPR027470 Cation efflux protein, cytoplasmic domain CLH39_17715 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CLH39_17715 IPR002524 Cation efflux protein CLH39_17720 IPR036390 Winged helix DNA-binding domain superfamily CLH39_17720 IPR000847 Transcription regulator HTH, LysR CLH39_17720 IPR005119 LysR, substrate-binding CLH39_17720 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17725 IPR008579 Domain of unknown function DUF861, cupin-3 CLH39_17725 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein CLH39_17725 IPR014710 RmlC-like jelly roll fold CLH39_17725 IPR011051 RmlC-like cupin domain superfamily CLH39_17725 IPR013096 Cupin 2, conserved barrel CLH39_17730 IPR002125 Cytidine and deoxycytidylate deaminase domain CLH39_17730 IPR016193 Cytidine deaminase-like CLH39_17730 IPR016192 APOBEC/CMP deaminase, zinc-binding CLH39_17735 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLH39_17735 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CLH39_17745 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CLH39_17745 IPR001303 Class II aldolase/adducin N-terminal CLH39_17750 IPR005829 Sugar transporter, conserved site CLH39_17750 IPR036259 MFS transporter superfamily CLH39_17750 IPR005828 Major facilitator, sugar transporter-like CLH39_17750 IPR020846 Major facilitator superfamily domain CLH39_17750 IPR011701 Major facilitator superfamily CLH39_17750 IPR004736 MFS transporter, metabolite:H symporter CLH39_17755 IPR036249 Thioredoxin-like superfamily CLH39_17755 IPR014440 HCCA isomerase/glutathione S-transferase kappa CLH39_17755 IPR001853 DSBA-like thioredoxin domain CLH39_17760 IPR001789 Signal transduction response regulator, receiver domain CLH39_17760 IPR011006 CheY-like superfamily CLH39_17760 IPR000160 GGDEF domain CLH39_17760 IPR029787 Nucleotide cyclase CLH39_17765 IPR004837 Sodium/calcium exchanger membrane region CLH39_17765 IPR004713 Calcium/proton exchanger CLH39_17775 IPR005119 LysR, substrate-binding CLH39_17775 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17775 IPR036390 Winged helix DNA-binding domain superfamily CLH39_17775 IPR000847 Transcription regulator HTH, LysR CLH39_17795 IPR020449 Transcription regulator HTH, AraC- type CLH39_17795 IPR009057 Homeobox-like domain superfamily CLH39_17795 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CLH39_17795 IPR018060 DNA binding HTH domain, AraC-type CLH39_17795 IPR018062 HTH domain AraC-type, conserved site CLH39_17800 IPR036736 ACP-like superfamily CLH39_17800 IPR000868 Isochorismatase-like CLH39_17800 IPR036380 Isochorismatase-like superfamily CLH39_17800 IPR009081 Phosphopantetheine binding ACP domain CLH39_17800 IPR016291 Isochorismatase CLH39_17825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CLH39_17825 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CLH39_17830 IPR029058 Alpha/Beta hydrolase fold CLH39_17830 IPR000073 Alpha/beta hydrolase fold-1 CLH39_17830 IPR002410 Peptidase S33 CLH39_17830 IPR005944 Proline iminopeptidase CLH39_17835 IPR013785 Aldolase-type TIM barrel CLH39_17835 IPR012675 Beta-grasp domain superfamily CLH39_17835 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLH39_17835 IPR010035 ThiS, thiamine-biosynthesis CLH39_17835 IPR033983 Thiazole synthase ThiG CLH39_17835 IPR008867 Thiazole synthase CLH39_17835 IPR003749 Sulfur carrier ThiS/MoaD-like CLH39_17840 IPR014004 Transport-associated and nodulation domain, bacteria CLH39_17840 IPR036779 LysM domain superfamily CLH39_17840 IPR018392 LysM domain CLH39_17840 IPR007055 BON domain CLH39_17845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_17845 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CLH39_17845 IPR003593 AAA+ ATPase domain CLH39_17845 IPR013822 Signal recognition particle SRP54, helical bundle CLH39_17845 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CLH39_17845 IPR004780 Signal recognition particle protein CLH39_17845 IPR022941 Signal recognition particle, SRP54 subunit CLH39_17845 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLH39_17845 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CLH39_17860 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CLH39_17860 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CLH39_17865 IPR003594 Histidine kinase/HSP90-like ATPase CLH39_17865 IPR019805 Heat shock protein Hsp90, conserved site CLH39_17865 IPR037196 HSP90, C-terminal domain CLH39_17865 IPR001404 Heat shock protein Hsp90 family CLH39_17865 IPR020568 Ribosomal protein S5 domain 2-type fold CLH39_17865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CLH39_17865 IPR020575 Heat shock protein Hsp90, N-terminal CLH39_17875 IPR011008 Dimeric alpha-beta barrel CLH39_17875 IPR014910 Putative monooxygenase YdhR CLH39_17890 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_17890 IPR000847 Transcription regulator HTH, LysR CLH39_17890 IPR005119 LysR, substrate-binding CLH39_17890 IPR036390 Winged helix DNA-binding domain superfamily CLH39_17895 IPR005064 Bordetella uptake gene CLH39_17895 IPR042100 Bordetella uptake gene, domain 1 CLH39_17900 IPR023631 Amidase signature domain CLH39_17900 IPR020556 Amidase, conserved site CLH39_17900 IPR036928 Amidase signature (AS) superfamily CLH39_17900 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLH39_17900 IPR000120 Amidase CLH39_17910 IPR009057 Homeobox-like domain superfamily CLH39_17910 IPR001647 DNA-binding HTH domain, TetR-type CLH39_17910 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CLH39_17915 IPR004638 Drug resistance transporter EmrB-like CLH39_17915 IPR011701 Major facilitator superfamily CLH39_17915 IPR020846 Major facilitator superfamily domain CLH39_17915 IPR036259 MFS transporter superfamily CLH39_17920 IPR002942 RNA-binding S4 domain CLH39_17920 IPR025708 Heat shock protein 15 CLH39_17920 IPR036986 RNA-binding S4 domain superfamily CLH39_17925 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CLH39_17925 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CLH39_17925 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CLH39_17925 IPR029065 Enolase C-terminal domain-like CLH39_17925 IPR029017 Enolase-like, N-terminal CLH39_17925 IPR036849 Enolase-like, C-terminal domain superfamily CLH39_17925 IPR034618 D-galactarolactone cycloisomerase CLH39_17930 IPR005064 Bordetella uptake gene CLH39_17930 IPR042100 Bordetella uptake gene, domain 1 CLH39_17935 IPR003607 HD/PDEase domain CLH39_17935 IPR006674 HD domain CLH39_17945 IPR003791 Protein of unknown function UPF0178 CLH39_17955 IPR027304 Trigger factor/SurA domain superfamily CLH39_17955 IPR037041 Trigger factor, C-terminal domain superfamily CLH39_17955 IPR008880 Trigger factor, C-terminal CLH39_17955 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLH39_17955 IPR023059 Foldase protein PrsA CLH39_17955 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLH39_17960 IPR005496 Integral membrane protein TerC CLH39_17960 IPR022301 Integral membrane protein YjbE CLH39_17975 IPR012910 TonB-dependent receptor, plug domain CLH39_17975 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_17975 IPR011662 Secretin/TonB, short N-terminal domain CLH39_17975 IPR039423 TonB-dependent receptor-like CLH39_17975 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_17975 IPR010916 TonB box, conserved site CLH39_17975 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_17975 IPR010917 TonB-dependent receptor, conserved site CLH39_17975 IPR010105 TonB-dependent siderophore receptor CLH39_17985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_17985 IPR035906 MetI-like superfamily CLH39_17990 IPR035906 MetI-like superfamily CLH39_17990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_17995 IPR006059 Bacterial extracellular solute-binding protein CLH39_17995 IPR006061 Solute-binding family 1, conserved site CLH39_18000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18000 IPR003439 ABC transporter-like CLH39_18000 IPR015855 ABC transporter, maltose/maltodextrin import, MalK CLH39_18000 IPR017871 ABC transporter, conserved site CLH39_18000 IPR008995 Molybdate/tungstate binding, C-terminal CLH39_18000 IPR013611 Transport-associated OB, type 2 CLH39_18000 IPR003593 AAA+ ATPase domain CLH39_18005 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18005 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18005 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CLH39_18005 IPR037171 NagB/RpiA transferase-like CLH39_18005 IPR001034 DeoR-type HTH domain CLH39_18005 IPR014036 DeoR C-terminal sensor domain CLH39_18010 IPR032466 Metal-dependent hydrolase CLH39_18010 IPR013108 Amidohydrolase 3 CLH39_18010 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_18010 IPR033932 YtcJ like CLH39_18015 IPR036249 Thioredoxin-like superfamily CLH39_18015 IPR013766 Thioredoxin domain CLH39_18015 IPR024706 Peroxiredoxin, AhpC-type CLH39_18015 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLH39_18030 IPR004841 Amino acid permease/ SLC12A domain CLH39_18030 IPR004840 Amino acid permease, conserved site CLH39_18035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_18035 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_18035 IPR010111 Kynureninase CLH39_18035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_18035 IPR000192 Aminotransferase class V domain CLH39_18040 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CLH39_18040 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18040 IPR019888 Transcription regulator AsnC-type CLH39_18040 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLH39_18040 IPR011991 ArsR-like helix-turn-helix domain CLH39_18040 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18040 IPR011008 Dimeric alpha-beta barrel CLH39_18040 IPR000485 AsnC-type HTH domain CLH39_18045 IPR028082 Periplasmic binding protein-like I CLH39_18045 IPR000524 Transcription regulator HTH, GntR CLH39_18045 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18045 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18045 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain CLH39_18060 IPR003804 L-lactate permease CLH39_18065 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18065 IPR011711 GntR, C-terminal CLH39_18065 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_18065 IPR000524 Transcription regulator HTH, GntR CLH39_18065 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18070 IPR020920 L-lactate dehydrogenase, bacterial CLH39_18070 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CLH39_18070 IPR037396 FMN hydroxy acid dehydrogenase domain CLH39_18070 IPR013785 Aldolase-type TIM barrel CLH39_18070 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CLH39_18070 IPR000262 FMN-dependent dehydrogenase CLH39_18075 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal CLH39_18075 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 CLH39_18075 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 CLH39_18075 IPR006094 FAD linked oxidase, N-terminal CLH39_18075 IPR016166 FAD-binding domain, PCMH-type CLH39_18075 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_18075 IPR016167 FAD-binding, type PCMH, subdomain 1 CLH39_18075 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_18075 IPR016164 FAD-linked oxidase-like, C-terminal CLH39_18075 IPR012256 D-lactate dehydrogenase CLH39_18080 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_18080 IPR011527 ABC transporter type 1, transmembrane domain CLH39_18080 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_18080 IPR003439 ABC transporter-like CLH39_18080 IPR017871 ABC transporter, conserved site CLH39_18080 IPR013113 FAD-binding 9, siderophore-interacting CLH39_18080 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_18080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18080 IPR003593 AAA+ ATPase domain CLH39_18080 IPR007037 Siderophore-interacting protein, C-terminal domain CLH39_18080 IPR017938 Riboflavin synthase-like beta-barrel CLH39_18085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18085 IPR017871 ABC transporter, conserved site CLH39_18085 IPR003439 ABC transporter-like CLH39_18085 IPR011527 ABC transporter type 1, transmembrane domain CLH39_18085 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_18085 IPR003593 AAA+ ATPase domain CLH39_18090 IPR037294 ABC transporter, BtuC-like CLH39_18090 IPR000522 ABC transporter, permease protein, BtuC-like CLH39_18095 IPR037294 ABC transporter, BtuC-like CLH39_18095 IPR000522 ABC transporter, permease protein, BtuC-like CLH39_18100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18100 IPR017871 ABC transporter, conserved site CLH39_18100 IPR003593 AAA+ ATPase domain CLH39_18100 IPR003439 ABC transporter-like CLH39_18105 IPR002491 ABC transporter periplasmic binding domain CLH39_18105 IPR033870 FatB domain CLH39_18110 IPR010916 TonB box, conserved site CLH39_18110 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_18110 IPR010917 TonB-dependent receptor, conserved site CLH39_18110 IPR010105 TonB-dependent siderophore receptor CLH39_18110 IPR039423 TonB-dependent receptor-like CLH39_18110 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CLH39_18110 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_18110 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_18110 IPR012910 TonB-dependent receptor, plug domain CLH39_18120 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CLH39_18120 IPR017927 FAD-binding domain, ferredoxin reductase-type CLH39_18120 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CLH39_18120 IPR012675 Beta-grasp domain superfamily CLH39_18120 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLH39_18120 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CLH39_18120 IPR036010 2Fe-2S ferredoxin-like superfamily CLH39_18120 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CLH39_18120 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLH39_18120 IPR017938 Riboflavin synthase-like beta-barrel CLH39_18125 IPR000847 Transcription regulator HTH, LysR CLH39_18125 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18125 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18125 IPR005119 LysR, substrate-binding CLH39_18130 IPR008254 Flavodoxin/nitric oxide synthase CLH39_18130 IPR010089 Flavoprotein WrbA-like CLH39_18130 IPR005025 NADPH-dependent FMN reductase-like CLH39_18130 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic CLH39_18130 IPR029039 Flavoprotein-like superfamily CLH39_18135 IPR011701 Major facilitator superfamily CLH39_18135 IPR020846 Major facilitator superfamily domain CLH39_18135 IPR036259 MFS transporter superfamily CLH39_18135 IPR005829 Sugar transporter, conserved site CLH39_18140 IPR029032 AhpD-like CLH39_18140 IPR004675 Alkylhydroperoxidase AhpD core CLH39_18140 IPR003779 Carboxymuconolactone decarboxylase-like CLH39_18155 IPR017850 Alkaline-phosphatase-like, core domain superfamily CLH39_18155 IPR032506 Domain of unknown function DUF4976 CLH39_18155 IPR000917 Sulfatase, N-terminal CLH39_18165 IPR012347 Ferritin-like CLH39_18165 IPR009078 Ferritin-like superfamily CLH39_18165 IPR010287 Domain of unknown function DUF892 CLH39_18175 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18175 IPR005119 LysR, substrate-binding CLH39_18175 IPR000847 Transcription regulator HTH, LysR CLH39_18175 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18180 IPR011701 Major facilitator superfamily CLH39_18180 IPR020846 Major facilitator superfamily domain CLH39_18180 IPR036259 MFS transporter superfamily CLH39_18185 IPR018170 Aldo/keto reductase, conserved site CLH39_18185 IPR036812 NADP-dependent oxidoreductase domain superfamily CLH39_18185 IPR020471 Aldo/keto reductase CLH39_18185 IPR023210 NADP-dependent oxidoreductase domain CLH39_18195 IPR001702 Porin, Gram-negative type CLH39_18195 IPR023614 Porin domain superfamily CLH39_18195 IPR002299 Porin, Neisseria sp. type CLH39_18195 IPR033900 Porin domain, Gram-negative type CLH39_18200 IPR024704 Structural maintenance of chromosomes protein CLH39_18200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_18200 IPR010935 SMCs flexible hinge CLH39_18200 IPR036277 SMCs flexible hinge superfamily CLH39_18200 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CLH39_18200 IPR003395 RecF/RecN/SMC, N-terminal CLH39_18200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18240 IPR014158 Type IV secretion system, VirB5 CLH39_18240 IPR023220 Type IV secretion system, VirB5-domain CLH39_18280 IPR035069 TTHA1013/TTHA0281-like CLH39_18280 IPR010998 Integrase/recombinase, N-terminal CLH39_18280 IPR002104 Integrase, catalytic domain CLH39_18280 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLH39_18280 IPR013762 Integrase-like, catalytic domain superfamily CLH39_18290 IPR002549 Transmembrane protein TqsA-like CLH39_18295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLH39_18295 IPR022310 NAD/GMP synthase CLH39_18295 IPR003694 NAD(+) synthetase CLH39_18295 IPR022926 NH(3)-dependent NAD(+) synthetase CLH39_18305 IPR020556 Amidase, conserved site CLH39_18305 IPR023631 Amidase signature domain CLH39_18305 IPR000120 Amidase CLH39_18305 IPR036928 Amidase signature (AS) superfamily CLH39_18310 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_18310 IPR007387 TRAP transporter, small membrane protein DctQ CLH39_18310 IPR004681 TRAP transporter large membrane protein DctM CLH39_18320 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_18320 IPR004682 TRAP transporter solute receptor, DctP family CLH39_18320 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_18330 IPR042096 Dihydroxy-acid dehydratase, C-terminal CLH39_18330 IPR004404 Dihydroxy-acid dehydratase CLH39_18330 IPR037237 IlvD/EDD, N-terminal domain CLH39_18330 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CLH39_18330 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CLH39_18335 IPR021135 Phosphoenolpyruvate carboxylase CLH39_18335 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CLH39_18335 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site CLH39_18335 IPR033129 Phosphoenolpyruvate carboxylase, His active site CLH39_18335 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CLH39_18340 IPR002781 Transmembrane protein TauE-like CLH39_18360 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CLH39_18360 IPR012006 tRNA nucleotidyltransferase, proteobacteria CLH39_18360 IPR002646 Poly A polymerase, head domain CLH39_18365 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily CLH39_18365 IPR008939 Lytic transglycosylase, superhelical U-shaped CLH39_18365 IPR000189 Prokaryotic transglycosylase, active site CLH39_18365 IPR008258 Transglycosylase SLT domain 1 CLH39_18365 IPR023346 Lysozyme-like domain superfamily CLH39_18365 IPR012289 Lytic transglycosylase, superhelical linker CLH39_18375 IPR029041 FAD-linked oxidoreductase-like CLH39_18375 IPR003171 Methylenetetrahydrofolate reductase CLH39_18375 IPR004620 5,10-methylenetetrahydrofolate reductase CLH39_18380 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CLH39_18385 IPR042172 Adenosylhomocysteinase-like superfamily CLH39_18385 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site CLH39_18385 IPR000043 Adenosylhomocysteinase-like CLH39_18385 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLH39_18385 IPR036291 NAD(P)-binding domain superfamily CLH39_18390 IPR022630 S-adenosylmethionine synthetase, C-terminal CLH39_18390 IPR022631 S-adenosylmethionine synthetase, conserved site CLH39_18390 IPR022636 S-adenosylmethionine synthetase superfamily CLH39_18390 IPR022628 S-adenosylmethionine synthetase, N-terminal CLH39_18390 IPR022629 S-adenosylmethionine synthetase, central domain CLH39_18390 IPR002133 S-adenosylmethionine synthetase CLH39_18400 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CLH39_18400 IPR004960 Bacterial lipid A biosynthesis acyltransferase CLH39_18405 IPR018510 Diaminopimelate epimerase, active site CLH39_18405 IPR001653 Diaminopimelate epimerase, DapF CLH39_18415 IPR023009 Tyrosine recombinase XerC/XerD CLH39_18415 IPR010998 Integrase/recombinase, N-terminal CLH39_18415 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLH39_18415 IPR013762 Integrase-like, catalytic domain superfamily CLH39_18415 IPR002104 Integrase, catalytic domain CLH39_18415 IPR004107 Integrase, SAM-like, N-terminal CLH39_18415 IPR011931 Tyrosine recombinase XerC CLH39_18420 IPR006129 Adhesin B CLH39_18420 IPR006128 Adhesion lipoprotein CLH39_18420 IPR006127 Periplasmic solute binding protein, ZnuA-like CLH39_18425 IPR001626 ABC transporter, TroCD-like CLH39_18425 IPR037294 ABC transporter, BtuC-like CLH39_18430 IPR003593 AAA+ ATPase domain CLH39_18430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18430 IPR017871 ABC transporter, conserved site CLH39_18430 IPR003439 ABC transporter-like CLH39_18435 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18435 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18435 IPR002481 Ferric-uptake regulator CLH39_18440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18440 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CLH39_18440 IPR036627 CobW-like, C-terminal domain superfamily CLH39_18440 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLH39_18445 IPR012784 RNA polymerase-binding transcription factor DksA CLH39_18445 IPR037187 DksA, N-terminal domain superfamily CLH39_18445 IPR000962 Zinc finger, DksA/TraR C4-type CLH39_18445 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CLH39_18450 IPR029055 Nucleophile aminohydrolases, N-terminal CLH39_18450 IPR001353 Proteasome, subunit alpha/beta CLH39_18450 IPR023333 Proteasome B-type subunit CLH39_18450 IPR022281 ATP-dependent protease, HslV subunit CLH39_18455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18455 IPR004491 Heat shock protein HslU CLH39_18455 IPR019489 Clp ATPase, C-terminal CLH39_18455 IPR003593 AAA+ ATPase domain CLH39_18455 IPR003959 ATPase, AAA-type, core CLH39_18470 IPR016030 Cobalamin adenosyltransferase-like CLH39_18470 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CLH39_18470 IPR036451 Cobalamin adenosyltransferase-like superfamily CLH39_18485 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_18485 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_18485 IPR005814 Aminotransferase class-III CLH39_18485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_18495 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18495 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18495 IPR005119 LysR, substrate-binding CLH39_18495 IPR000847 Transcription regulator HTH, LysR CLH39_18500 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CLH39_18500 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CLH39_18500 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_18500 IPR003156 DHHA1 domain CLH39_18500 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CLH39_18500 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CLH39_18500 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLH39_18500 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CLH39_18500 IPR002318 Alanine-tRNA ligase, class IIc CLH39_18510 IPR001123 Amino acid exporter protein, LeuE-type CLH39_18510 IPR004778 Homoserine/Threonine efflux protein CLH39_18535 IPR019897 RidA, conserved site CLH39_18535 IPR035959 RutC-like superfamily CLH39_18535 IPR006175 YjgF/YER057c/UK114 family CLH39_18535 IPR006056 RidA family CLH39_18540 IPR006175 YjgF/YER057c/UK114 family CLH39_18540 IPR006056 RidA family CLH39_18540 IPR019897 RidA, conserved site CLH39_18540 IPR035959 RutC-like superfamily CLH39_18550 IPR005261 Conserved hypothetical protein CHP00659 CLH39_18550 IPR007300 CidB/LrgB family CLH39_18555 IPR005115 Uncharacterised domain UPF0126 CLH39_18560 IPR011701 Major facilitator superfamily CLH39_18560 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CLH39_18560 IPR036259 MFS transporter superfamily CLH39_18560 IPR020846 Major facilitator superfamily domain CLH39_18570 IPR029058 Alpha/Beta hydrolase fold CLH39_18570 IPR000073 Alpha/beta hydrolase fold-1 CLH39_18570 IPR008220 Homoserine/serine acetyltransferase MetX-like CLH39_18575 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18575 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CLH39_18575 IPR016032 Signal transduction response regulator, C-terminal effector CLH39_18575 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CLH39_18575 IPR000792 Transcription regulator LuxR, C-terminal CLH39_18585 IPR007370 Glutamate--cysteine ligase CLH39_18585 IPR006334 Glutamate--cysteine ligase, monofunctional CLH39_18585 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLH39_18590 IPR012910 TonB-dependent receptor, plug domain CLH39_18590 IPR039426 Vitamin B12 transporter BtuB-like CLH39_18590 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_18590 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_18605 IPR009056 Cytochrome c-like domain CLH39_18605 IPR002323 Cytochrome c, class IE CLH39_18605 IPR036909 Cytochrome c-like domain superfamily CLH39_18615 IPR036291 NAD(P)-binding domain superfamily CLH39_18615 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_18615 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CLH39_18615 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLH39_18615 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CLH39_18615 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLH39_18615 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC CLH39_18620 IPR003673 CoA-transferase family III CLH39_18620 IPR023606 CoA-transferase family III domain superfamily CLH39_18630 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_18630 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_18630 IPR029045 ClpP/crotonase-like domain superfamily CLH39_18635 IPR013785 Aldolase-type TIM barrel CLH39_18635 IPR029055 Nucleophile aminohydrolases, N-terminal CLH39_18635 IPR017932 Glutamine amidotransferase type 2 domain CLH39_18635 IPR006982 Glutamate synthase, central-N CLH39_18635 IPR002932 Glutamate synthase domain CLH39_18635 IPR002489 Glutamate synthase, alpha subunit, C-terminal CLH39_18635 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CLH39_18640 IPR009051 Alpha-helical ferredoxin CLH39_18640 IPR028261 Dihydroprymidine dehydrogenase domain II CLH39_18640 IPR023753 FAD/NAD(P)-binding domain CLH39_18640 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_18640 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 CLH39_18655 IPR013986 DExx box DNA helicase domain superfamily CLH39_18655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18655 IPR014016 UvrD-like helicase, ATP-binding domain CLH39_18655 IPR034739 UvrD/AddA helicase, N-terminal CLH39_18655 IPR014017 UvrD-like DNA helicase, C-terminal CLH39_18655 IPR005752 ATP-dependent DNA helicase Rep CLH39_18655 IPR000212 DNA helicase, UvrD/REP type CLH39_18660 IPR011545 DEAD/DEAH box helicase domain CLH39_18660 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_18660 IPR005259 Primosomal protein N' CLH39_18660 IPR001650 Helicase, C-terminal CLH39_18660 IPR041236 Primosomal protein N, C-terminal domain CLH39_18660 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CLH39_18660 IPR041222 Primosomal protein N', 3' DNA-binding domain CLH39_18660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18660 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CLH39_18665 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLH39_18665 IPR038071 UROD/MetE-like superfamily CLH39_18665 IPR006361 Uroporphyrinogen decarboxylase HemE CLH39_18675 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CLH39_18675 IPR009057 Homeobox-like domain superfamily CLH39_18675 IPR018060 DNA binding HTH domain, AraC-type CLH39_18675 IPR020449 Transcription regulator HTH, AraC- type CLH39_18685 IPR016008 Amine dehydrogenase light chain CLH39_18685 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily CLH39_18685 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain CLH39_18685 IPR006311 Twin-arginine translocation pathway, signal sequence CLH39_18690 IPR036249 Thioredoxin-like superfamily CLH39_18690 IPR013478 Methylamine dehydrogenase accessory protein MauD CLH39_18690 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLH39_18690 IPR013766 Thioredoxin domain CLH39_18700 IPR009451 Amine dehydrogenase heavy chain CLH39_18700 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CLH39_18700 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CLH39_18710 IPR016163 Aldehyde dehydrogenase, C-terminal CLH39_18710 IPR015590 Aldehyde dehydrogenase domain CLH39_18710 IPR016162 Aldehyde dehydrogenase, N-terminal CLH39_18710 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLH39_18710 IPR016160 Aldehyde dehydrogenase, cysteine active site CLH39_18710 IPR016161 Aldehyde/histidinol dehydrogenase CLH39_18715 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CLH39_18715 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLH39_18715 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CLH39_18715 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CLH39_18715 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18715 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CLH39_18715 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CLH39_18725 IPR002220 DapA-like CLH39_18725 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLH39_18725 IPR013785 Aldolase-type TIM barrel CLH39_18725 IPR020625 Schiff base-forming aldolase, active site CLH39_18730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_18730 IPR035906 MetI-like superfamily CLH39_18730 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_18735 IPR035906 MetI-like superfamily CLH39_18735 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_18735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_18740 IPR017871 ABC transporter, conserved site CLH39_18740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18740 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_18740 IPR003593 AAA+ ATPase domain CLH39_18740 IPR003439 ABC transporter-like CLH39_18745 IPR018313 Solute-binding protein family 3, conserved site CLH39_18745 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_18750 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18750 IPR005119 LysR, substrate-binding CLH39_18750 IPR037414 Transcriptional activator protein LysR, PBP2 domain CLH39_18750 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18750 IPR000847 Transcription regulator HTH, LysR CLH39_18760 IPR003439 ABC transporter-like CLH39_18760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18760 IPR015859 ABC transporter, taurine import, TauD CLH39_18760 IPR017871 ABC transporter, conserved site CLH39_18760 IPR003593 AAA+ ATPase domain CLH39_18765 IPR035906 MetI-like superfamily CLH39_18765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_18770 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_18770 IPR032466 Metal-dependent hydrolase CLH39_18770 IPR006680 Amidohydrolase-related CLH39_18770 IPR023512 Deaminase MtaD/DadD CLH39_18775 IPR032466 Metal-dependent hydrolase CLH39_18775 IPR011059 Metal-dependent hydrolase, composite domain superfamily CLH39_18775 IPR017593 Allantoinase CLH39_18775 IPR006680 Amidohydrolase-related CLH39_18780 IPR010158 Amidase, carbamoylase-type CLH39_18780 IPR036264 Bacterial exopeptidase dimerisation domain CLH39_18780 IPR002933 Peptidase M20 CLH39_18785 IPR012349 FMN-binding split barrel CLH39_18785 IPR002563 Flavin reductase like domain CLH39_18800 IPR011009 Protein kinase-like domain superfamily CLH39_18800 IPR024165 Aminoglycoside 3-phosphotransferase CLH39_18800 IPR002575 Aminoglycoside phosphotransferase CLH39_18805 IPR016181 Acyl-CoA N-acyltransferase CLH39_18805 IPR000182 GNAT domain CLH39_18810 IPR007344 GrpB/Dephospho-CoA kinase CLH39_18815 IPR011527 ABC transporter type 1, transmembrane domain CLH39_18815 IPR036640 ABC transporter type 1, transmembrane domain superfamily CLH39_18815 IPR003439 ABC transporter-like CLH39_18815 IPR017871 ABC transporter, conserved site CLH39_18815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18815 IPR039421 Type I protein exporter CLH39_18815 IPR003593 AAA+ ATPase domain CLH39_18825 IPR007349 Domain of unknown function DUF418 CLH39_18835 IPR005119 LysR, substrate-binding CLH39_18835 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18835 IPR037416 Nodulation protein D, PBP2 CLH39_18835 IPR000847 Transcription regulator HTH, LysR CLH39_18835 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18840 IPR001544 Aminotransferase class IV CLH39_18840 IPR018300 Aminotransferase, class IV, conserved site CLH39_18840 IPR033939 Branched-chain aminotransferase CLH39_18840 IPR005785 Branched-chain amino acid aminotransferase I CLH39_18840 IPR036038 Aminotransferase-like, PLP-dependent enzymes CLH39_18850 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLH39_18850 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CLH39_18850 IPR016039 Thiolase-like CLH39_18850 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLH39_18865 IPR008778 Pirin, C-terminal domain CLH39_18865 IPR003829 Pirin, N-terminal domain CLH39_18865 IPR014710 RmlC-like jelly roll fold CLH39_18865 IPR011051 RmlC-like cupin domain superfamily CLH39_18865 IPR012093 Pirin CLH39_18875 IPR005170 Transporter-associated domain CLH39_18875 IPR005496 Integral membrane protein TerC CLH39_18875 IPR016169 FAD-binding, type PCMH, subdomain 2 CLH39_18875 IPR000644 CBS domain CLH39_18875 IPR036318 FAD-binding, type PCMH-like superfamily CLH39_18885 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_18885 IPR000847 Transcription regulator HTH, LysR CLH39_18885 IPR037416 Nodulation protein D, PBP2 CLH39_18885 IPR005119 LysR, substrate-binding CLH39_18885 IPR036390 Winged helix DNA-binding domain superfamily CLH39_18895 IPR020846 Major facilitator superfamily domain CLH39_18895 IPR036259 MFS transporter superfamily CLH39_18895 IPR011701 Major facilitator superfamily CLH39_18895 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CLH39_18895 IPR004734 Multidrug resistance protein CLH39_18900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18900 IPR011545 DEAD/DEAH box helicase domain CLH39_18900 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_18900 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLH39_18900 IPR001650 Helicase, C-terminal CLH39_18900 IPR014014 RNA helicase, DEAD-box type, Q motif CLH39_18900 IPR023554 ATP-dependent RNA helicase RhlB type CLH39_18905 IPR029058 Alpha/Beta hydrolase fold CLH39_18905 IPR000801 Putative esterase CLH39_18910 IPR037294 ABC transporter, BtuC-like CLH39_18910 IPR000522 ABC transporter, permease protein, BtuC-like CLH39_18915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18915 IPR017871 ABC transporter, conserved site CLH39_18915 IPR003439 ABC transporter-like CLH39_18915 IPR015863 ABC transporter, hemin import, HmuV CLH39_18915 IPR003593 AAA+ ATPase domain CLH39_18935 IPR022694 3-hydroxyacyl-CoA dehydrogenase CLH39_18935 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CLH39_18935 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLH39_18935 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLH39_18935 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CLH39_18935 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CLH39_18935 IPR036291 NAD(P)-binding domain superfamily CLH39_18945 IPR003593 AAA+ ATPase domain CLH39_18945 IPR003439 ABC transporter-like CLH39_18945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_18950 IPR035906 MetI-like superfamily CLH39_18965 IPR028081 Leucine-binding protein domain CLH39_18965 IPR000709 Leu/Ile/Val-binding protein CLH39_18965 IPR028082 Periplasmic binding protein-like I CLH39_18980 IPR017871 ABC transporter, conserved site CLH39_18980 IPR003439 ABC transporter-like CLH39_18980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18980 IPR003593 AAA+ ATPase domain CLH39_18980 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_18985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_18985 IPR017871 ABC transporter, conserved site CLH39_18985 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_18985 IPR003593 AAA+ ATPase domain CLH39_18985 IPR003439 ABC transporter-like CLH39_18995 IPR011963 2,3-dihydroxybenzoate-AMP ligase CLH39_18995 IPR000873 AMP-dependent synthetase/ligase CLH39_18995 IPR020845 AMP-binding, conserved site CLH39_18995 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_19000 IPR036736 ACP-like superfamily CLH39_19000 IPR000868 Isochorismatase-like CLH39_19000 IPR036380 Isochorismatase-like superfamily CLH39_19000 IPR009081 Phosphopantetheine binding ACP domain CLH39_19000 IPR016291 Isochorismatase CLH39_19005 IPR001242 Condensation domain CLH39_19005 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CLH39_19005 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CLH39_19005 IPR001031 Thioesterase CLH39_19005 IPR009081 Phosphopantetheine binding ACP domain CLH39_19005 IPR042099 AMP-dependent synthetase-like superfamily CLH39_19005 IPR020802 Polyketide synthase, thioesterase domain CLH39_19005 IPR020845 AMP-binding, conserved site CLH39_19005 IPR000873 AMP-dependent synthetase/ligase CLH39_19005 IPR036736 ACP-like superfamily CLH39_19005 IPR029058 Alpha/Beta hydrolase fold CLH39_19005 IPR010071 Amino acid adenylation domain CLH39_19005 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_19010 IPR020846 Major facilitator superfamily domain CLH39_19010 IPR036259 MFS transporter superfamily CLH39_19010 IPR010290 Transmembrane secretion effector CLH39_19010 IPR023722 Enterobactin exporter, EntS CLH39_19020 IPR004561 Isochorismate synthase CLH39_19020 IPR005801 ADC synthase CLH39_19020 IPR015890 Chorismate-utilising enzyme, C-terminal CLH39_19025 IPR009081 Phosphopantetheine binding ACP domain CLH39_19025 IPR036380 Isochorismatase-like superfamily CLH39_19025 IPR016291 Isochorismatase CLH39_19025 IPR000868 Isochorismatase-like CLH39_19025 IPR036736 ACP-like superfamily CLH39_19030 IPR036291 NAD(P)-binding domain superfamily CLH39_19030 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLH39_19030 IPR002347 Short-chain dehydrogenase/reductase SDR CLH39_19030 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase CLH39_19040 IPR004090 Chemotaxis methyl-accepting receptor CLH39_19040 IPR003660 HAMP domain CLH39_19040 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLH39_19040 IPR033480 Single Cache domain 2 CLH39_19050 IPR033954 Disulphide bond isomerase, DsbC/G CLH39_19050 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CLH39_19050 IPR012336 Thioredoxin-like fold CLH39_19050 IPR036249 Thioredoxin-like superfamily CLH39_19050 IPR017937 Thioredoxin, conserved site CLH39_19055 IPR002938 FAD-binding domain CLH39_19055 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_19055 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CLH39_19055 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CLH39_19060 IPR010611 3D domain CLH39_19060 IPR026044 Membrane-bound lytic murein transglycosylase A CLH39_19060 IPR034654 MltA, 3D domain CLH39_19060 IPR005300 Lytic transglycosylase MltA, domain B CLH39_19060 IPR036908 RlpA-like domain superfamily CLH39_19065 IPR007474 ApaG domain CLH39_19065 IPR023065 Uncharacterised protein family ApaG CLH39_19065 IPR036767 ApaG domain superfamily CLH39_19070 IPR011060 Ribulose-phosphate binding barrel CLH39_19070 IPR000056 Ribulose-phosphate 3-epimerase-like CLH39_19070 IPR026019 Ribulose-phosphate 3-epimerase CLH39_19070 IPR013785 Aldolase-type TIM barrel CLH39_19080 IPR023214 HAD superfamily CLH39_19080 IPR037512 Phosphoglycolate phosphatase, prokaryotic CLH39_19080 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLH39_19080 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CLH39_19080 IPR041492 Haloacid dehalogenase-like hydrolase CLH39_19080 IPR006439 HAD hydrolase, subfamily IA CLH39_19080 IPR036412 HAD-like superfamily CLH39_19085 IPR005801 ADC synthase CLH39_19085 IPR015890 Chorismate-utilising enzyme, C-terminal CLH39_19085 IPR005256 Anthranilate synthase component I, PabB-like CLH39_19085 IPR006805 Anthranilate synthase component I, N-terminal CLH39_19085 IPR019999 Anthranilate synthase component I-like CLH39_19090 IPR029062 Class I glutamine amidotransferase-like CLH39_19090 IPR017926 Glutamine amidotransferase CLH39_19090 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CLH39_19095 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CLH39_19095 IPR000312 Glycosyl transferase, family 3 CLH39_19095 IPR005940 Anthranilate phosphoribosyl transferase CLH39_19095 IPR017459 Glycosyl transferase family 3, N-terminal domain CLH39_19095 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CLH39_19100 IPR013785 Aldolase-type TIM barrel CLH39_19100 IPR013798 Indole-3-glycerol phosphate synthase CLH39_19100 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CLH39_19100 IPR011060 Ribulose-phosphate binding barrel CLH39_19125 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 CLH39_19125 IPR003033 SCP2 sterol-binding domain CLH39_19125 IPR036527 SCP2 sterol-binding domain superfamily CLH39_19125 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CLH39_19135 IPR001539 Peptidase U32 CLH39_19135 IPR036206 Thiamin phosphate synthase superfamily CLH39_19185 IPR036895 Uracil-DNA glycosylase-like domain superfamily CLH39_19185 IPR005122 Uracil-DNA glycosylase-like CLH39_19185 IPR002043 Uracil-DNA glycosylase family 1 CLH39_19185 IPR018085 Uracil-DNA glycosylase, active site CLH39_19195 IPR031691 Lipoyl synthase, N-terminal CLH39_19195 IPR007197 Radical SAM CLH39_19195 IPR003698 Lipoyl synthase CLH39_19195 IPR013785 Aldolase-type TIM barrel CLH39_19195 IPR006638 Elp3/MiaB/NifB CLH39_19200 IPR029045 ClpP/crotonase-like domain superfamily CLH39_19200 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLH39_19200 IPR001753 Enoyl-CoA hydratase/isomerase CLH39_19200 IPR014748 Enoyl-CoA hydratase, C-terminal CLH39_19205 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CLH39_19205 IPR000544 Octanoyltransferase CLH39_19205 IPR020605 Octanoyltransferase, conserved site CLH39_19210 IPR007454 Uncharacterised protein family UPF0250 CLH39_19210 IPR027471 YbeD-like domain superfamily CLH39_19215 IPR036038 Aminotransferase-like, PLP-dependent enzymes CLH39_19215 IPR018300 Aminotransferase, class IV, conserved site CLH39_19215 IPR001544 Aminotransferase class IV CLH39_19215 IPR005784 D-amino acid aminotransferase CLH39_19220 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLH39_19220 IPR012338 Beta-lactamase/transpeptidase-like CLH39_19220 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CLH39_19220 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLH39_19220 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CLH39_19220 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CLH39_19230 IPR030855 Bifunctional ligase/repressor BirA CLH39_19230 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CLH39_19230 IPR004409 Biotin operon repressor, helix-turn-helix domain CLH39_19230 IPR003142 Biotin protein ligase, C-terminal CLH39_19230 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CLH39_19230 IPR008988 Transcriptional repressor, C-terminal CLH39_19235 IPR004619 Type III pantothenate kinase CLH39_19240 IPR005835 Nucleotidyl transferase domain CLH39_19240 IPR029044 Nucleotide-diphospho-sugar transferases CLH39_19240 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CLH39_19245 IPR012156 Cold shock, CspA CLH39_19245 IPR012340 Nucleic acid-binding, OB-fold CLH39_19245 IPR011129 Cold shock domain CLH39_19245 IPR019844 Cold-shock (CSD) domain CLH39_19245 IPR002059 Cold-shock protein, DNA-binding CLH39_19250 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CLH39_19250 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CLH39_19250 IPR001296 Glycosyl transferase, family 1 CLH39_19250 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CLH39_19255 IPR011908 Lipopolysaccharide heptosyltransferase I CLH39_19255 IPR002201 Glycosyl transferase, family 9 CLH39_19260 IPR036390 Winged helix DNA-binding domain superfamily CLH39_19260 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_19260 IPR000847 Transcription regulator HTH, LysR CLH39_19260 IPR005119 LysR, substrate-binding CLH39_19265 IPR009906 D-glutamate cyclase CLH39_19265 IPR038021 Putative hydro-lyase CLH39_19265 IPR016938 Uncharacterised protein family UPF0317 CLH39_19280 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_19280 IPR004681 TRAP transporter large membrane protein DctM CLH39_19290 IPR023631 Amidase signature domain CLH39_19290 IPR000120 Amidase CLH39_19290 IPR036928 Amidase signature (AS) superfamily CLH39_19295 IPR000620 EamA domain CLH39_19300 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CLH39_19300 IPR036477 Formyl transferase, N-terminal domain superfamily CLH39_19300 IPR011034 Formyl transferase-like, C-terminal domain superfamily CLH39_19300 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CLH39_19300 IPR002376 Formyl transferase, N-terminal CLH39_19300 IPR037022 Formyl transferase, C-terminal domain superfamily CLH39_19300 IPR005793 Formyl transferase, C-terminal CLH39_19300 IPR005794 Methionyl-tRNA formyltransferase CLH39_19305 IPR036821 Peptide deformylase superfamily CLH39_19305 IPR023635 Peptide deformylase CLH39_19310 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_19310 IPR003488 DNA recombination-mediator protein A CLH39_19310 IPR041614 DprA, winged helix domain CLH39_19315 IPR013785 Aldolase-type TIM barrel CLH39_19315 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site CLH39_19315 IPR000891 Pyruvate carboxyltransferase CLH39_19325 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_19325 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CLH39_19325 IPR018313 Solute-binding protein family 3, conserved site CLH39_19335 IPR017871 ABC transporter, conserved site CLH39_19335 IPR003439 ABC transporter-like CLH39_19335 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CLH39_19335 IPR003593 AAA+ ATPase domain CLH39_19335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_19350 IPR001851 ABC transporter, permease CLH39_19355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_19355 IPR003593 AAA+ ATPase domain CLH39_19355 IPR003439 ABC transporter-like CLH39_19355 IPR017871 ABC transporter, conserved site CLH39_19355 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CLH39_19360 IPR020845 AMP-binding, conserved site CLH39_19360 IPR042099 AMP-dependent synthetase-like superfamily CLH39_19360 IPR000873 AMP-dependent synthetase/ligase CLH39_19370 IPR005064 Bordetella uptake gene CLH39_19370 IPR042100 Bordetella uptake gene, domain 1 CLH39_19375 IPR001608 Alanine racemase, N-terminal CLH39_19375 IPR011078 Pyridoxal phosphate homeostasis protein CLH39_19375 IPR029066 PLP-binding barrel CLH39_19380 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CLH39_19380 IPR014362 Glutamate dehydrogenase CLH39_19380 IPR036291 NAD(P)-binding domain superfamily CLH39_19380 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CLH39_19380 IPR033524 Leu/Phe/Val dehydrogenases active site CLH39_19380 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CLH39_19380 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CLH39_19385 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CLH39_19385 IPR003439 ABC transporter-like CLH39_19385 IPR003593 AAA+ ATPase domain CLH39_19385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_19385 IPR017871 ABC transporter, conserved site CLH39_19390 IPR001320 Ionotropic glutamate receptor CLH39_19390 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CLH39_19390 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CLH39_19390 IPR018313 Solute-binding protein family 3, conserved site CLH39_19395 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_19395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_19395 IPR035906 MetI-like superfamily CLH39_19400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CLH39_19400 IPR035906 MetI-like superfamily CLH39_19400 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CLH39_19405 IPR004550 L-asparaginase, type II CLH39_19405 IPR006034 Asparaginase/glutaminase-like CLH39_19405 IPR020827 Asparaginase/glutaminase, active site 1 CLH39_19405 IPR040919 Asparaginase/glutaminase, C-terminal CLH39_19405 IPR027473 L-asparaginase, C-terminal CLH39_19405 IPR027474 L-asparaginase, N-terminal CLH39_19405 IPR036152 Asparaginase/glutaminase-like superfamily CLH39_19405 IPR027475 Asparaginase/glutaminase, active site 2 CLH39_19405 IPR037152 L-asparaginase, N-terminal domain superfamily CLH39_19410 IPR002942 RNA-binding S4 domain CLH39_19410 IPR006145 Pseudouridine synthase, RsuA/RluA CLH39_19410 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLH39_19410 IPR006225 Pseudouridine synthase, RluC/RluD CLH39_19410 IPR020103 Pseudouridine synthase, catalytic domain superfamily CLH39_19420 IPR011852 TRAP transporter solute receptor, TAXI family CLH39_19430 IPR017968 Acylphosphatase, conserved site CLH39_19430 IPR001792 Acylphosphatase-like domain CLH39_19430 IPR020456 Acylphosphatase CLH39_19430 IPR036046 Acylphosphatase-like domain superfamily CLH39_19435 IPR001633 EAL domain CLH39_19435 IPR000160 GGDEF domain CLH39_19435 IPR035919 EAL domain superfamily CLH39_19435 IPR005330 MHYT domain CLH39_19435 IPR029787 Nucleotide cyclase CLH39_19445 IPR013430 Toxin-antitoxin system, antidote protein, HigA CLH39_19445 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CLH39_19445 IPR001387 Cro/C1-type helix-turn-helix domain CLH39_19450 IPR003798 DNA recombination RmuC CLH39_19460 IPR023080 D-amino acid dehydrogenase DadA CLH39_19460 IPR006076 FAD dependent oxidoreductase CLH39_19460 IPR036188 FAD/NAD(P)-binding domain superfamily CLH39_19465 IPR005119 LysR, substrate-binding CLH39_19465 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_19465 IPR036390 Winged helix DNA-binding domain superfamily CLH39_19465 IPR037414 Transcriptional activator protein LysR, PBP2 domain CLH39_19465 IPR000847 Transcription regulator HTH, LysR CLH39_19470 IPR008920 Transcription regulator FadR/GntR, C-terminal CLH39_19470 IPR000524 Transcription regulator HTH, GntR CLH39_19470 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_19470 IPR036390 Winged helix DNA-binding domain superfamily CLH39_19470 IPR011711 GntR, C-terminal CLH39_19475 IPR042100 Bordetella uptake gene, domain 1 CLH39_19475 IPR005064 Bordetella uptake gene CLH39_19485 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC CLH39_19485 IPR042099 AMP-dependent synthetase-like superfamily CLH39_19485 IPR000873 AMP-dependent synthetase/ligase CLH39_19485 IPR025110 AMP-binding enzyme, C-terminal domain CLH39_19485 IPR020845 AMP-binding, conserved site CLH39_19505 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_19505 IPR004681 TRAP transporter large membrane protein DctM CLH39_19515 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_19515 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_19520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CLH39_19520 IPR036412 HAD-like superfamily CLH39_19520 IPR006439 HAD hydrolase, subfamily IA CLH39_19520 IPR023214 HAD superfamily CLH39_19520 IPR041492 Haloacid dehalogenase-like hydrolase CLH39_19540 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CLH39_19540 IPR017871 ABC transporter, conserved site CLH39_19540 IPR003439 ABC transporter-like CLH39_19540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_19540 IPR003593 AAA+ ATPase domain CLH39_19545 IPR030802 ABC transporter permease MalE CLH39_19545 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CLH39_19555 IPR004681 TRAP transporter large membrane protein DctM CLH39_19555 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_19575 IPR020890 Transcription regulator HTH, HdfR CLH39_19575 IPR005119 LysR, substrate-binding CLH39_19575 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_19575 IPR036390 Winged helix DNA-binding domain superfamily CLH39_19575 IPR000847 Transcription regulator HTH, LysR CLH39_19585 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_19585 IPR005119 LysR, substrate-binding CLH39_19585 IPR000847 Transcription regulator HTH, LysR CLH39_19585 IPR036390 Winged helix DNA-binding domain superfamily CLH39_19590 IPR036928 Amidase signature (AS) superfamily CLH39_19590 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLH39_19590 IPR020556 Amidase, conserved site CLH39_19590 IPR023631 Amidase signature domain CLH39_19590 IPR000120 Amidase CLH39_19605 IPR006073 GTP binding domain CLH39_19605 IPR004520 tRNA modification GTPase MnmE CLH39_19605 IPR027368 tRNA modification GTPase MnmE domain 2 CLH39_19605 IPR025867 MnmE, helical domain CLH39_19605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_19605 IPR031168 TrmE-type guanine nucleotide-binding domain CLH39_19605 IPR005225 Small GTP-binding protein domain CLH39_19605 IPR018948 GTP-binding protein TrmE, N-terminal CLH39_19605 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLH39_19620 IPR007621 TPM domain CLH39_19630 IPR001650 Helicase, C-terminal CLH39_19630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_19630 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CLH39_19630 IPR014014 RNA helicase, DEAD-box type, Q motif CLH39_19630 IPR028622 ATP-dependent RNA helicase RhlE CLH39_19630 IPR011545 DEAD/DEAH box helicase domain CLH39_19630 IPR014001 Helicase superfamily 1/2, ATP-binding domain CLH39_19635 IPR001123 Amino acid exporter protein, LeuE-type CLH39_19640 IPR005225 Small GTP-binding protein domain CLH39_19640 IPR000795 Transcription factor, GTP-binding domain CLH39_19640 IPR009000 Translation protein, beta-barrel domain superfamily CLH39_19640 IPR004548 Peptide chain release factor 3 CLH39_19640 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CLH39_19640 IPR031157 Tr-type G domain, conserved site CLH39_19640 IPR004161 Translation elongation factor EFTu-like, domain 2 CLH39_19640 IPR035647 EF-G domain III/V-like CLH39_19640 IPR041732 Peptide chain release factor 3, GTP-binding domain CLH39_19640 IPR032090 Peptide chain release factor 3, C-terminal CLH39_19640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLH39_19650 IPR002024 Bacterioferritin CLH39_19650 IPR012347 Ferritin-like CLH39_19650 IPR009040 Ferritin-like diiron domain CLH39_19650 IPR009078 Ferritin-like superfamily CLH39_19650 IPR008331 Ferritin/DPS protein domain CLH39_19660 IPR005119 LysR, substrate-binding CLH39_19660 IPR000847 Transcription regulator HTH, LysR CLH39_19660 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CLH39_19660 IPR036388 Winged helix-like DNA-binding domain superfamily CLH39_19660 IPR036390 Winged helix DNA-binding domain superfamily CLH39_19665 IPR000868 Isochorismatase-like CLH39_19665 IPR036380 Isochorismatase-like superfamily CLH39_19670 IPR018389 TRAP transporter solute receptor DctP/TeaA CLH39_19670 IPR041722 Alpha-keto acid binding periplasmic protein CLH39_19670 IPR026289 Solute binding protein, TakP-like CLH39_19670 IPR038404 TRAP transporter solute receptor DctP superfamily CLH39_19680 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CLH39_19680 IPR004681 TRAP transporter large membrane protein DctM CLH39_19680 IPR007387 TRAP transporter, small membrane protein DctQ CLH39_19685 IPR003673 CoA-transferase family III CLH39_19685 IPR023606 CoA-transferase family III domain superfamily CLH39_19690 IPR000891 Pyruvate carboxyltransferase CLH39_19690 IPR013785 Aldolase-type TIM barrel CLH39_19695 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CLH39_19695 IPR036008 Aconitase, iron-sulfur domain CLH39_19695 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLH39_19695 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CLH39_19695 IPR004430 3-isopropylmalate dehydratase, large subunit CLH39_19695 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLH39_19700 IPR004431 3-isopropylmalate dehydratase, small subunit CLH39_19700 IPR033940 3-isopropylmalate dehydratase, swivel domain CLH39_19700 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CLH39_19700 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLH39_19705 IPR010917 TonB-dependent receptor, conserved site CLH39_19705 IPR010105 TonB-dependent siderophore receptor CLH39_19705 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CLH39_19705 IPR012910 TonB-dependent receptor, plug domain CLH39_19705 IPR037066 TonB-dependent receptor, plug domain superfamily CLH39_19705 IPR039423 TonB-dependent receptor-like CLH39_19705 IPR000531 TonB-dependent receptor-like, beta-barrel CLH39_19705 IPR010916 TonB box, conserved site CLH39_19705 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CLH39_19710 IPR007046 RNA polymerase sigma factor 54, core-binding domain CLH39_19710 IPR000394 RNA polymerase sigma factor 54 CLH39_19710 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLH39_19710 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CLH39_19720 IPR039371 LeuA, N-terminal catalytic TIM barrel domain CLH39_19720 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CLH39_19720 IPR005668 2-isopropylmalate synthase CLH39_19720 IPR013785 Aldolase-type TIM barrel CLH39_19720 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CLH39_19720 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CLH39_19720 IPR000891 Pyruvate carboxyltransferase CLH39_19760 IPR001853 DSBA-like thioredoxin domain CLH39_19760 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CLH39_19760 IPR036249 Thioredoxin-like superfamily CLH39_19760 IPR017937 Thioredoxin, conserved site CLH39_19760 IPR013766 Thioredoxin domain CLH39_19765 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CLH39_19765 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CLH39_19765 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLH39_19765 IPR015424 Pyridoxal phosphate-dependent transferase CLH39_19765 IPR006233 Cystathionine beta-lyase, bacterial CLH39_19775 IPR011789 Cu(I)-responsive transcriptional regulator CLH39_19775 IPR009061 Putative DNA-binding domain superfamily CLH39_19775 IPR000551 MerR-type HTH domain CLH39_19775 IPR015358 Transcription regulator MerR, DNA binding CLH39_19780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CLH39_19780 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLH39_19780 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLH39_19780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CLH39_19780 IPR006089 Acyl-CoA dehydrogenase, conserved site CLH39_19780 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLH39_19780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CLH39_19785 IPR010452 Isocitrate dehydrogenase kinasephosphatase CLH39_19790 IPR016039 Thiolase-like CLH39_19790 IPR020615 Thiolase, acyl-enzyme intermediate active site CLH39_19790 IPR020610 Thiolase, active site CLH39_19790 IPR020617 Thiolase, C-terminal CLH39_19790 IPR020613 Thiolase, conserved site CLH39_19790 IPR020616 Thiolase, N-terminal CLH39_19790 IPR002155 Thiolase CLH39_19795 IPR034733 Acetyl-CoA carboxylase CLH39_19795 IPR029045 ClpP/crotonase-like domain superfamily CLH39_19795 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CLH39_19795 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal