locus-tag class description MID00_00010 IPR011991 ArsR-like helix-turn-helix domain MID00_00010 IPR000485 AsnC-type HTH domain MID00_00010 IPR011008 Dimeric alpha-beta barrel MID00_00010 IPR019888 Transcription regulator AsnC-type MID00_00010 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MID00_00010 IPR019885 Transcription regulator HTH, AsnC-type, conserved site MID00_00010 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_00010 IPR036390 Winged helix DNA-binding domain superfamily MID00_00025 IPR029787 Nucleotide cyclase MID00_00025 IPR000160 GGDEF domain MID00_00075 IPR002196 Glycoside hydrolase, family 24 MID00_00075 IPR034690 Endolysin T4 type MID00_00075 IPR023346 Lysozyme-like domain superfamily MID00_00085 IPR002104 Integrase, catalytic domain MID00_00085 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_00085 IPR013762 Integrase-like, catalytic domain superfamily MID00_00085 IPR010998 Integrase/recombinase, N-terminal MID00_00190 IPR006197 Peptidase S24, LexA-like MID00_00190 IPR006200 Transcription regulator LexA MID00_00190 IPR039418 LexA-like MID00_00190 IPR036286 LexA/Signal peptidase-like superfamily MID00_00190 IPR006199 LexA repressor, DNA-binding domain MID00_00190 IPR015927 Peptidase S24/S26A/S26B/S26C MID00_00190 IPR036390 Winged helix DNA-binding domain superfamily MID00_00190 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_00200 IPR036165 YefM-like superfamily MID00_00200 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM MID00_00205 IPR009614 Toxin YoeB MID00_00205 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily MID00_00220 IPR001915 Peptidase M48 MID00_00225 IPR032710 NTF2-like domain superfamily MID00_00225 IPR023006 Uncharacterised protein family UPF0225 MID00_00230 IPR016181 Acyl-CoA N-acyltransferase MID00_00230 IPR000182 GNAT domain MID00_00240 IPR000390 Small multidrug resistance protein family MID00_00245 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily MID00_00245 IPR003732 D-aminoacyl-tRNA deacylase DTD MID00_00250 IPR004670 Na+/H+ antiporter NhaA MID00_00250 IPR023171 Na/H antiporter domain superfamily MID00_00260 IPR006668 Magnesium transporter, MgtE intracellular domain MID00_00260 IPR038076 MgtE, N-terminal domain superfamily MID00_00260 IPR038048 Magnesium transporter MgtE, transmembrane domain MID00_00260 IPR006669 Magnesium transporter MgtE MID00_00260 IPR006667 SLC41 divalent cation transporters, integral membrane domain MID00_00260 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily MID00_00260 IPR000644 CBS domain MID00_00265 IPR003594 Histidine kinase/HSP90-like ATPase MID00_00265 IPR011006 CheY-like superfamily MID00_00265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_00265 IPR005467 Histidine kinase domain MID00_00265 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_00265 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_00265 IPR036641 HPT domain superfamily MID00_00265 IPR001789 Signal transduction response regulator, receiver domain MID00_00265 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_00265 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain MID00_00270 IPR001789 Signal transduction response regulator, receiver domain MID00_00270 IPR037522 HD-GYP domain MID00_00270 IPR011006 CheY-like superfamily MID00_00270 IPR003607 HD/PDEase domain MID00_00275 IPR001387 Cro/C1-type helix-turn-helix domain MID00_00275 IPR010982 Lambda repressor-like, DNA-binding domain superfamily MID00_00290 IPR036259 MFS transporter superfamily MID00_00290 IPR005829 Sugar transporter, conserved site MID00_00290 IPR020846 Major facilitator superfamily domain MID00_00290 IPR005828 Major facilitator, sugar transporter-like MID00_00290 IPR036292 Proline/betaine transporter ProP, C-terminal MID00_00290 IPR004736 MFS transporter, metabolite:H symporter MID00_00290 IPR015041 Osmosensory transporter coiled coil MID00_00295 IPR010920 LSM domain superfamily MID00_00295 IPR023298 P-type ATPase, transmembrane domain superfamily MID00_00295 IPR023408 Mechanosensitive ion channel MscS domain superfamily MID00_00295 IPR024393 Mechanosensitive ion channel MscS, porin domain MID00_00295 IPR025692 Mechanosensitive ion channel inner membrane domain 1 MID00_00295 IPR011066 Mechanosensitive ion channel MscS, C-terminal MID00_00295 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 MID00_00295 IPR006685 Mechanosensitive ion channel MscS MID00_00295 IPR006686 Mechanosensitive ion channel MscS, conserved site MID00_00300 IPR010920 LSM domain superfamily MID00_00300 IPR011066 Mechanosensitive ion channel MscS, C-terminal MID00_00300 IPR006686 Mechanosensitive ion channel MscS, conserved site MID00_00300 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 MID00_00300 IPR023408 Mechanosensitive ion channel MscS domain superfamily MID00_00300 IPR025692 Mechanosensitive ion channel inner membrane domain 1 MID00_00300 IPR024393 Mechanosensitive ion channel MscS, porin domain MID00_00300 IPR006685 Mechanosensitive ion channel MscS MID00_00305 IPR002937 Amine oxidase MID00_00305 IPR014105 Carotenoid/retinoid oxidoreductase MID00_00305 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_00305 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site MID00_00310 IPR036291 NAD(P)-binding domain superfamily MID00_00310 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_00320 IPR032710 NTF2-like domain superfamily MID00_00320 IPR017641 Benzoate 1,2-dioxygenase, small subunit MID00_00320 IPR000391 Ring-hydroxylating dioxygenase beta subunit MID00_00325 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_00325 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_00325 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site MID00_00325 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain MID00_00325 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit MID00_00325 IPR017639 Benzoate 1,2-dioxygenase, large subunit MID00_00340 IPR007400 PrpF protein MID00_00350 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 MID00_00350 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain MID00_00350 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MID00_00350 IPR006249 Aconitase/Iron-responsive element-binding protein 2 MID00_00350 IPR018136 Aconitase family, 4Fe-4S cluster binding site MID00_00350 IPR036008 Aconitase, iron-sulfur domain MID00_00350 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain MID00_00355 IPR036425 MoaB/Mog-like domain superfamily MID00_00355 IPR008135 Competence-induced protein CinA MID00_00355 IPR001453 MoaB/Mog domain MID00_00355 IPR041424 CinA, KH domain MID00_00355 IPR036653 CinA-like, C-terminal MID00_00355 IPR008136 CinA, C-terminal MID00_00360 IPR000835 MarR-type HTH domain MID00_00360 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_00360 IPR036390 Winged helix DNA-binding domain superfamily MID00_00360 IPR023187 Transcriptional regulator MarR-type, conserved site MID00_00370 IPR013785 Aldolase-type TIM barrel MID00_00370 IPR024188 Glutamate synthase large subunit-like protein MID00_00370 IPR002932 Glutamate synthase domain MID00_00370 IPR027283 Glutamate synthase large subunit-like protein, bacteria MID00_00385 IPR003782 Copper chaperone SCO1/SenC MID00_00385 IPR036249 Thioredoxin-like superfamily MID00_00400 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like MID00_00400 IPR023214 HAD superfamily MID00_00400 IPR036412 HAD-like superfamily MID00_00405 IPR006043 Xanthine/uracil/vitamin C permease MID00_00410 IPR010019 Integral membrane protein, YccS MID00_00410 IPR010020 Integral membrane protein, YccS/YhfK MID00_00410 IPR032692 Integral membrane protein YccS, N-terminal MID00_00415 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_00415 IPR005694 Efflux pump membrane protein MID00_00415 IPR030196 Multidrug resistance protein MdtN MID00_00425 IPR018422 Cation/H+ exchanger, CPA1 family MID00_00425 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria MID00_00425 IPR038770 Sodium/solute symporter superfamily MID00_00425 IPR006153 Cation/H+ exchanger MID00_00435 IPR002771 Multiple antibiotic resistance (MarC)-related MID00_00450 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type MID00_00450 IPR029052 Metallo-dependent phosphatase-like MID00_00450 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase MID00_00455 IPR009056 Cytochrome c-like domain MID00_00455 IPR036909 Cytochrome c-like domain superfamily MID00_00460 IPR036909 Cytochrome c-like domain superfamily MID00_00460 IPR024167 Cytochrome c4-like MID00_00460 IPR009056 Cytochrome c-like domain MID00_00470 IPR023616 Cytochrome c oxidase-like, subunit I domain MID00_00470 IPR036927 Cytochrome c oxidase-like, subunit I superfamily MID00_00470 IPR000883 Cytochrome c oxidase subunit I MID00_00470 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site MID00_00470 IPR004677 Cytochrome c oxidase cbb3-type, subunit I MID00_00475 IPR039420 Transcriptional regulatory protein WalR-like MID00_00475 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_00475 IPR016032 Signal transduction response regulator, C-terminal effector MID00_00475 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_00475 IPR001789 Signal transduction response regulator, receiver domain MID00_00475 IPR011006 CheY-like superfamily MID00_00480 IPR013727 Two-component sensor kinase, N-terminal MID00_00480 IPR003594 Histidine kinase/HSP90-like ATPase MID00_00480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_00480 IPR005467 Histidine kinase domain MID00_00480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_00480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_00480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_00485 IPR012340 Nucleic acid-binding, OB-fold MID00_00485 IPR002059 Cold-shock protein, DNA-binding MID00_00485 IPR019844 Cold-shock (CSD) domain MID00_00485 IPR012156 Cold shock, CspA MID00_00485 IPR011129 Cold shock domain MID00_00510 IPR036909 Cytochrome c-like domain superfamily MID00_00510 IPR009056 Cytochrome c-like domain MID00_00515 IPR023753 FAD/NAD(P)-binding domain MID00_00515 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_00515 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding MID00_00515 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily MID00_00515 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_00515 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal MID00_00515 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_00555 IPR023271 Aquaporin-like MID00_00555 IPR023743 Aquaporin Z MID00_00555 IPR000425 Major intrinsic protein MID00_00555 IPR022357 Major intrinsic protein, conserved site MID00_00555 IPR034294 Aquaporin transporter MID00_00560 IPR009739 Lysozyme inhibitor LprI, N-terminal MID00_00565 IPR036390 Winged helix DNA-binding domain superfamily MID00_00565 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_00565 IPR000847 Transcription regulator HTH, LysR MID00_00565 IPR005119 LysR, substrate-binding MID00_00580 IPR036873 Rhodanese-like domain superfamily MID00_00580 IPR001763 Rhodanese-like domain MID00_00585 IPR004840 Amino acid permease, conserved site MID00_00585 IPR004841 Amino acid permease/ SLC12A domain MID00_00595 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_00595 IPR004681 TRAP transporter large membrane protein DctM MID00_00605 IPR022394 Methylamine utilisation protein, MauG MID00_00605 IPR036909 Cytochrome c-like domain superfamily MID00_00605 IPR004852 Di-haem cytochrome c peroxidase MID00_00605 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase MID00_00605 IPR009056 Cytochrome c-like domain MID00_00610 IPR012910 TonB-dependent receptor, plug domain MID00_00610 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_00610 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_00625 IPR013987 PhnA protein, N-terminal MID00_00625 IPR004624 PhnA protein MID00_00625 IPR013988 PhnA protein, C-terminal MID00_00635 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_00635 IPR000847 Transcription regulator HTH, LysR MID00_00635 IPR005119 LysR, substrate-binding MID00_00635 IPR036390 Winged helix DNA-binding domain superfamily MID00_00640 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_00640 IPR036291 NAD(P)-binding domain superfamily MID00_00640 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase MID00_00640 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_00645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_00645 IPR035906 MetI-like superfamily MID00_00650 IPR017871 ABC transporter, conserved site MID00_00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_00650 IPR015859 ABC transporter, taurine import, TauD MID00_00650 IPR003593 AAA+ ATPase domain MID00_00650 IPR003439 ABC transporter-like MID00_00655 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_00655 IPR010068 Taurine ABC transporter, substrate-binding protein TauA MID00_00655 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain MID00_00695 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_00695 IPR013762 Integrase-like, catalytic domain superfamily MID00_00695 IPR002104 Integrase, catalytic domain MID00_00695 IPR010998 Integrase/recombinase, N-terminal MID00_00705 IPR003474 Gluconate transporter MID00_00710 IPR036909 Cytochrome c-like domain superfamily MID00_00710 IPR009056 Cytochrome c-like domain MID00_00710 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily MID00_00710 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily MID00_00710 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding MID00_00710 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead MID00_00715 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_00715 IPR012675 Beta-grasp domain superfamily MID00_00715 IPR002888 [2Fe-2S]-binding MID00_00715 IPR036884 [2Fe-2S]-binding domain superfamily MID00_00715 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_00715 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_00725 IPR005064 Bordetella uptake gene MID00_00725 IPR042100 Bordetella uptake gene, domain 1 MID00_00730 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal MID00_00730 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily MID00_00730 IPR013785 Aldolase-type TIM barrel MID00_00730 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal MID00_00730 IPR004393 Nicotinate-nucleotide pyrophosphorylase MID00_00730 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal MID00_00730 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD MID00_00740 IPR013655 PAS fold-3 MID00_00740 IPR035965 PAS domain superfamily MID00_00740 IPR004090 Chemotaxis methyl-accepting receptor MID00_00740 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain MID00_00740 IPR003660 HAMP domain MID00_00740 IPR000014 PAS domain MID00_00740 IPR001610 PAC motif MID00_00745 IPR013655 PAS fold-3 MID00_00745 IPR003660 HAMP domain MID00_00745 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain MID00_00745 IPR001610 PAC motif MID00_00745 IPR000014 PAS domain MID00_00745 IPR035965 PAS domain superfamily MID00_00745 IPR004090 Chemotaxis methyl-accepting receptor MID00_00750 IPR007383 Protein of unknown function DUF445 MID00_00760 IPR001029 Flagellin, D0/D1 domain MID00_00760 IPR001492 Flagellin MID00_00765 IPR029044 Nucleotide-diphospho-sugar transferases MID00_00780 IPR014284 RNA polymerase sigma-70 like domain MID00_00780 IPR000943 RNA polymerase sigma-70 MID00_00780 IPR007627 RNA polymerase sigma-70 region 2 MID00_00780 IPR007624 RNA polymerase sigma-70 region 3 MID00_00780 IPR007630 RNA polymerase sigma-70 region 4 MID00_00780 IPR012845 RNA polymerase sigma factor, FliA/WhiG MID00_00780 IPR013325 RNA polymerase sigma factor, region 2 MID00_00780 IPR028617 RNA polymerase sigma factor FliA MID00_00780 IPR013324 RNA polymerase sigma factor, region 3/4-like MID00_00785 IPR005186 FlaG protein MID00_00785 IPR035924 FlaG-like superfamily MID00_00790 IPR010810 Flagellin hook, IN motif MID00_00790 IPR040026 Flagellar hook-associated protein 2 MID00_00790 IPR010809 Flagellar hook-associated protein 2, C-terminal MID00_00790 IPR003481 Flagellar hook-associated protein 2, N-terminal MID00_00795 IPR036584 Flagellar protein FliS superfamily MID00_00795 IPR003713 Flagellar protein FliS MID00_00810 IPR006135 Type III secretion system substrate exporter MID00_00810 IPR029025 Type III secretion system substrate exporter, C-terminal MID00_00810 IPR006136 Flagellar biosynthetic protein FlhB MID00_00815 IPR001624 Flagellar hook-basal body complex protein FliE MID00_00820 IPR006182 Secretory protein YscJ/FliF MID00_00820 IPR013556 Flagellar M-ring C-terminal MID00_00820 IPR000067 Flagellar M-ring protein FliF MID00_00825 IPR032779 Flagellar motor switch protein FliG, middle domain MID00_00825 IPR011002 Flagellar motor switch protein FliG, alpha-helical MID00_00825 IPR028263 Flagellar motor switch protein FliG, N-terminal domain MID00_00825 IPR000090 Flagellar motor switch protein FliG MID00_00825 IPR023087 Flagellar motor switch protein FliG, C-terminal MID00_00835 IPR020005 Flagellar export ATPase FliI, clade 1 MID00_00835 IPR040627 T3SS EscN ATPase, C-terminal MID00_00835 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_00835 IPR005714 ATPase, type III secretion system, FliI/YscN MID00_00835 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain MID00_00835 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site MID00_00835 IPR003593 AAA+ ATPase domain MID00_00835 IPR032463 ATPase, type III secretion system, FliI MID00_00850 IPR005503 Flagellar basal body-associated protein FliL MID00_00855 IPR036429 SpoA-like superfamily MID00_00855 IPR028976 CheC-like superfamily MID00_00855 IPR001689 Flagellar motor switch protein FliM MID00_00855 IPR001543 Surface presentation of antigen (SpoA) MID00_00860 IPR012826 Flagellar motor switch FliN MID00_00860 IPR031576 Flagellar motor switch protein FliN, N-terminal MID00_00860 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb MID00_00860 IPR001543 Surface presentation of antigen (SpoA) MID00_00860 IPR036429 SpoA-like superfamily MID00_00865 IPR022781 Flagellar biosynthesis protein, FliO MID00_00870 IPR005838 Type III secretion system inner membrane P protein MID00_00870 IPR005837 Flagellar transport protein FliP MID00_00875 IPR006305 Flagellar biosynthesis protein FliQ MID00_00875 IPR002191 Bacterial export protein family 3 MID00_00880 IPR006303 Flagellar biosynthesis protein FliR MID00_00880 IPR002010 Type III secretion system inner membrane R protein MID00_00885 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain MID00_00885 IPR040982 DNA polymerase III alpha subunit finger domain MID00_00885 IPR029460 DNA polymerase, helix-hairpin-helix motif MID00_00885 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain MID00_00885 IPR013520 Exonuclease, RNase T/DNA polymerase III MID00_00885 IPR004013 PHP domain MID00_00885 IPR003141 Polymerase/histidinol phosphatase, N-terminal MID00_00885 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type MID00_00885 IPR012337 Ribonuclease H-like superfamily MID00_00885 IPR036397 Ribonuclease H superfamily MID00_00895 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain MID00_00895 IPR003660 HAMP domain MID00_00895 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site MID00_00895 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding MID00_00895 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily MID00_00895 IPR004090 Chemotaxis methyl-accepting receptor MID00_00910 IPR013384 Flagellar hook-associated protein 3 MID00_00910 IPR001029 Flagellin, D0/D1 domain MID00_00915 IPR001444 Flagellar basal body rod protein, N-terminal MID00_00915 IPR019776 Flagellar basal body rod protein, conserved site MID00_00915 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MID00_00915 IPR002371 Flagellar hook-associated protein 1 MID00_00920 IPR019301 Flagellar protein FlgJ, N-terminal MID00_00920 IPR013377 Peptidoglycan hydrolase FlgJ MID00_00920 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain MID00_00925 IPR001782 Flagellar P-ring protein MID00_00930 IPR000527 Flagellar L-ring protein MID00_00935 IPR012834 Flagellar basal-body rod FlgG MID00_00935 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like MID00_00935 IPR020013 Flagellar hook-basal body protein, FlgE/F/G MID00_00935 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MID00_00935 IPR001444 Flagellar basal body rod protein, N-terminal MID00_00935 IPR019776 Flagellar basal body rod protein, conserved site MID00_00940 IPR001444 Flagellar basal body rod protein, N-terminal MID00_00940 IPR019776 Flagellar basal body rod protein, conserved site MID00_00940 IPR020013 Flagellar hook-basal body protein, FlgE/F/G MID00_00940 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MID00_00940 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like MID00_00945 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like MID00_00945 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MID00_00945 IPR020013 Flagellar hook-basal body protein, FlgE/F/G MID00_00945 IPR019776 Flagellar basal body rod protein, conserved site MID00_00945 IPR011491 Flagellar hook protein FlgE MID00_00945 IPR037058 Flagellar hook protein FlgE superfamily MID00_00945 IPR001444 Flagellar basal body rod protein, N-terminal MID00_00950 IPR025965 FlgD Ig-like domain MID00_00950 IPR005648 Flagellar hook capping protein MID00_00950 IPR025963 FlgD Tudor-like domain MID00_00955 IPR006299 Flagellar basal-body rod protein FlgC MID00_00955 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MID00_00955 IPR019776 Flagellar basal body rod protein, conserved site MID00_00955 IPR001444 Flagellar basal body rod protein, N-terminal MID00_00960 IPR001444 Flagellar basal body rod protein, N-terminal MID00_00960 IPR019776 Flagellar basal body rod protein, conserved site MID00_00960 IPR006300 Flagellar basal-body rod protein FlgB MID00_00970 IPR035890 Anti-sigma-28 factor FlgM superfamily MID00_00970 IPR007412 Anti-sigma-28 factor, FlgM MID00_00970 IPR031316 Anti-sigma-28 factor FlgM, C-terminal MID00_00980 IPR003593 AAA+ ATPase domain MID00_00980 IPR020006 Flagellar biosynthesis protein FlhF MID00_00980 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_00980 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain MID00_00985 IPR006301 Flagellar biosynthesis protein FlhA MID00_00985 IPR001712 Type III secretion system FHIPEP MID00_00985 IPR025505 FHIPEP conserved site MID00_00985 IPR042194 FHIPEP, domain 1 MID00_00985 IPR042193 FHIPEP, domain 3 MID00_00985 IPR042196 FHIPEP, domain 4 MID00_00990 IPR006135 Type III secretion system substrate exporter MID00_00990 IPR006136 Flagellar biosynthetic protein FlhB MID00_00990 IPR029025 Type III secretion system substrate exporter, C-terminal MID00_00995 IPR007439 Chemotaxis phosphatase, CheZ MID00_01000 IPR011006 CheY-like superfamily MID00_01000 IPR001789 Signal transduction response regulator, receiver domain MID00_01005 IPR035909 Methylesterase CheB, C-terminal MID00_01005 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase MID00_01005 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type MID00_01005 IPR001789 Signal transduction response regulator, receiver domain MID00_01005 IPR011006 CheY-like superfamily MID00_01010 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal MID00_01010 IPR000780 MCP methyltransferase, CheR-type MID00_01010 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MID00_01010 IPR026024 Chemotaxis protein methyltransferase CheR MID00_01010 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily MID00_01010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_01015 IPR004090 Chemotaxis methyl-accepting receptor MID00_01015 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily MID00_01015 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site MID00_01015 IPR003660 HAMP domain MID00_01015 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding MID00_01015 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain MID00_01020 IPR039315 Chemotaxis protein CheW MID00_01020 IPR036061 CheW-like domain superfamily MID00_01020 IPR002545 CheW-like domain MID00_01025 IPR036641 HPT domain superfamily MID00_01025 IPR003594 Histidine kinase/HSP90-like ATPase MID00_01025 IPR035891 CheY-binding domain of CheA MID00_01025 IPR015162 CheY binding MID00_01025 IPR002545 CheW-like domain MID00_01025 IPR036061 CheW-like domain superfamily MID00_01025 IPR004105 Histidine kinase CheA-like, homodimeric domain MID00_01025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_01025 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_01025 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain MID00_01025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_01025 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily MID00_01025 IPR005467 Histidine kinase domain MID00_01030 IPR025713 Motility protein B, N-terminal domain MID00_01030 IPR006665 OmpA-like domain MID00_01030 IPR036737 OmpA-like domain superfamily MID00_01035 IPR000540 Flagellar motor protein MotA, conserved site MID00_01035 IPR022522 Flagellar motor stator, MotA MID00_01035 IPR002898 MotA/TolQ/ExbB proton channel MID00_01040 IPR007944 Flagellar transcriptional activator FlhC MID00_01045 IPR023559 Flagellar transcriptional activator FlhD MID00_01045 IPR036194 Flagellar transcriptional activator FlhD superfamily MID00_01050 IPR038765 Papain-like cysteine peptidase superfamily MID00_01050 IPR000064 Endopeptidase, NLPC/P60 domain MID00_01055 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily MID00_01055 IPR006076 FAD dependent oxidoreductase MID00_01055 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_01055 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase MID00_01055 IPR031656 Alpha-glycerophosphate oxidase, C-terminal MID00_01060 IPR018484 Carbohydrate kinase, FGGY, N-terminal MID00_01060 IPR005999 Glycerol kinase MID00_01060 IPR018483 Carbohydrate kinase, FGGY, conserved site MID00_01060 IPR018485 Carbohydrate kinase, FGGY, C-terminal MID00_01060 IPR000577 Carbohydrate kinase, FGGY MID00_01065 IPR007829 TM2 domain MID00_01070 IPR000917 Sulfatase, N-terminal MID00_01070 IPR024607 Sulfatase, conserved site MID00_01070 IPR017850 Alkaline-phosphatase-like, core domain superfamily MID00_01075 IPR042095 Sulfatase-modifying factor enzyme superfamily MID00_01075 IPR005532 Sulfatase-modifying factor enzyme MID00_01075 IPR016187 C-type lectin fold MID00_01080 IPR001902 SLC26A/SulP transporter MID00_01080 IPR011547 SLC26A/SulP transporter domain MID00_01080 IPR002645 STAS domain MID00_01080 IPR036513 STAS domain superfamily MID00_01085 IPR023214 HAD superfamily MID00_01085 IPR023299 P-type ATPase, cytoplasmic domain N MID00_01085 IPR018303 P-type ATPase, phosphorylation site MID00_01085 IPR023298 P-type ATPase, transmembrane domain superfamily MID00_01085 IPR036412 HAD-like superfamily MID00_01085 IPR008250 P-type ATPase, A domain superfamily MID00_01085 IPR001757 P-type ATPase MID00_01085 IPR036163 Heavy metal-associated domain superfamily MID00_01085 IPR006121 Heavy metal-associated domain, HMA MID00_01085 IPR017969 Heavy-metal-associated, conserved site MID00_01085 IPR027256 P-type ATPase, subfamily IB MID00_01090 IPR009061 Putative DNA-binding domain superfamily MID00_01090 IPR000551 MerR-type HTH domain MID00_01090 IPR011794 Hg(II)-responsive transcriptional regulator MID00_01100 IPR007272 Sulphur transport domain MID00_01105 IPR036390 Winged helix DNA-binding domain superfamily MID00_01105 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_01105 IPR011991 ArsR-like helix-turn-helix domain MID00_01105 IPR001845 HTH ArsR-type DNA-binding domain MID00_01110 IPR001279 Metallo-beta-lactamase MID00_01110 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_01115 IPR007360 Invasion gene expression up-regulator, SirB MID00_01120 IPR018383 Uncharacterised protein family UPF0324, prokaryote MID00_01125 IPR005119 LysR, substrate-binding MID00_01125 IPR000847 Transcription regulator HTH, LysR MID00_01125 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_01125 IPR036390 Winged helix DNA-binding domain superfamily MID00_01135 IPR000620 EamA domain MID00_01145 IPR002299 Porin, Neisseria sp. type MID00_01145 IPR001702 Porin, Gram-negative type MID00_01145 IPR033900 Porin domain, Gram-negative type MID00_01145 IPR023614 Porin domain superfamily MID00_01160 IPR003841 Sodium-dependent phosphate transport protein MID00_01160 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein MID00_01165 IPR002549 Transmembrane protein TqsA-like MID00_01165 IPR014227 Putative transport protein YtvI-like MID00_01190 IPR003313 AraC-type arabinose-binding/dimerisation domain MID00_01190 IPR009057 Homeobox-like domain superfamily MID00_01190 IPR037923 Transcription regulator HTH-like MID00_01190 IPR018060 DNA binding HTH domain, AraC-type MID00_01190 IPR018062 HTH domain AraC-type, conserved site MID00_01190 IPR020449 Transcription regulator HTH, AraC- type MID00_01200 IPR015590 Aldehyde dehydrogenase domain MID00_01200 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_01200 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_01200 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_01200 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_01200 IPR016161 Aldehyde/histidinol dehydrogenase MID00_01205 IPR002938 FAD-binding domain MID00_01205 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_01205 IPR012733 4-hydroxybenzoate 3-monooxygenase MID00_01210 IPR009056 Cytochrome c-like domain MID00_01210 IPR036909 Cytochrome c-like domain superfamily MID00_01220 IPR006094 FAD linked oxidase, N-terminal MID00_01220 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 MID00_01220 IPR004113 FAD-linked oxidase, C-terminal MID00_01220 IPR016164 FAD-linked oxidase-like, C-terminal MID00_01220 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_01220 IPR036318 FAD-binding, type PCMH-like superfamily MID00_01220 IPR016166 FAD-binding domain, PCMH-type MID00_01220 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily MID00_01220 IPR016167 FAD-binding, type PCMH, subdomain 1 MID00_01225 IPR015590 Aldehyde dehydrogenase domain MID00_01225 IPR016161 Aldehyde/histidinol dehydrogenase MID00_01225 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_01225 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_01225 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_01230 IPR036259 MFS transporter superfamily MID00_01230 IPR020846 Major facilitator superfamily domain MID00_01230 IPR011701 Major facilitator superfamily MID00_01230 IPR004638 Drug resistance transporter EmrB-like MID00_01235 IPR005119 LysR, substrate-binding MID00_01235 IPR000847 Transcription regulator HTH, LysR MID00_01235 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_01235 IPR036390 Winged helix DNA-binding domain superfamily MID00_01240 IPR007400 PrpF protein MID00_01245 IPR036259 MFS transporter superfamily MID00_01245 IPR005829 Sugar transporter, conserved site MID00_01245 IPR020846 Major facilitator superfamily domain MID00_01245 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family MID00_01245 IPR011701 Major facilitator superfamily MID00_01250 IPR032465 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase MID00_01250 IPR006680 Amidohydrolase-related MID00_01250 IPR032466 Metal-dependent hydrolase MID00_01255 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase MID00_01255 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein MID00_01255 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily MID00_01260 IPR006680 Amidohydrolase-related MID00_01260 IPR032466 Metal-dependent hydrolase MID00_01265 IPR036622 Dioxygenase LigAB, LigA subunit superfamily MID00_01265 IPR014159 Protocatechuate 4,5-dioxygenase, alpha subunit MID00_01265 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit MID00_01270 IPR034937 Protocatechuate 4,5-dioxygenase beta chain MID00_01270 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B MID00_01275 IPR036291 NAD(P)-binding domain superfamily MID00_01275 IPR000683 Oxidoreductase, N-terminal MID00_01280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_01280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_01280 IPR004017 Cysteine-rich domain MID00_01280 IPR012257 Glycolate oxidase, iron-sulphur subunit MID00_01280 IPR009051 Alpha-helical ferredoxin MID00_01285 IPR016166 FAD-binding domain, PCMH-type MID00_01285 IPR036318 FAD-binding, type PCMH-like superfamily MID00_01285 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_01285 IPR006094 FAD linked oxidase, N-terminal MID00_01285 IPR016164 FAD-linked oxidase-like, C-terminal MID00_01290 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 MID00_01290 IPR016166 FAD-binding domain, PCMH-type MID00_01290 IPR036318 FAD-binding, type PCMH-like superfamily MID00_01290 IPR016164 FAD-linked oxidase-like, C-terminal MID00_01290 IPR004113 FAD-linked oxidase, C-terminal MID00_01290 IPR004490 Glycolate oxidase subunit GlcD MID00_01290 IPR006094 FAD linked oxidase, N-terminal MID00_01295 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_01295 IPR011711 GntR, C-terminal MID00_01295 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_01295 IPR000524 Transcription regulator HTH, GntR MID00_01295 IPR036390 Winged helix DNA-binding domain superfamily MID00_01300 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_01330 IPR012340 Nucleic acid-binding, OB-fold MID00_01330 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G MID00_01330 IPR004659 Ribonuclease E/G MID00_01330 IPR022967 RNA-binding domain, S1 MID00_01330 IPR003029 S1 domain MID00_01345 IPR011917 ABC transporter, lipid A export, MsbA MID00_01345 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01345 IPR017871 ABC transporter, conserved site MID00_01345 IPR003439 ABC transporter-like MID00_01345 IPR011527 ABC transporter type 1, transmembrane domain MID00_01345 IPR003593 AAA+ ATPase domain MID00_01345 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_01360 IPR005358 Putative zinc- or iron-chelating domain containing protein MID00_01370 IPR001296 Glycosyl transferase, family 1 MID00_01370 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MID00_01370 IPR017814 Mycothiol biosynthesis protein, MshA MID00_01380 IPR029044 Nucleotide-diphospho-sugar transferases MID00_01380 IPR001173 Glycosyltransferase 2-like MID00_01385 IPR002509 NodB homology domain MID00_01385 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel MID00_01390 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MID00_01390 IPR001296 Glycosyl transferase, family 1 MID00_01390 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA MID00_01395 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain MID00_01395 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain MID00_01395 IPR040982 DNA polymerase III alpha subunit finger domain MID00_01395 IPR029460 DNA polymerase, helix-hairpin-helix motif MID00_01395 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type MID00_01395 IPR004013 PHP domain MID00_01395 IPR003141 Polymerase/histidinol phosphatase, N-terminal MID00_01395 IPR016195 Polymerase/histidinol phosphatase-like MID00_01395 IPR004805 DNA polymerase III, alpha subunit MID00_01400 IPR010222 RNA helicase HrpA MID00_01400 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01400 IPR024590 RNA helicase HrpA, C-terminal MID00_01400 IPR001650 Helicase, C-terminal MID00_01400 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_01400 IPR011709 Domain of unknown function DUF1605 MID00_01400 IPR011545 DEAD/DEAH box helicase domain MID00_01400 IPR003593 AAA+ ATPase domain MID00_01400 IPR007502 Helicase-associated domain MID00_01405 IPR033719 N-acetylglutamate synthase, kinase-like domain MID00_01405 IPR010167 Amino-acid N-acetyltransferase MID00_01405 IPR036393 Acetylglutamate kinase-like superfamily MID00_01405 IPR016181 Acyl-CoA N-acyltransferase MID00_01405 IPR001048 Aspartate/glutamate/uridylate kinase MID00_01405 IPR000182 GNAT domain MID00_01410 IPR036766 Fe(II) trafficking protein YggX superfamily MID00_01410 IPR007457 Fe(II) trafficking protein YggX MID00_01415 IPR013515 Phytochrome, central region MID00_01415 IPR016132 Phytochrome chromophore attachment domain MID00_01415 IPR029787 Nucleotide cyclase MID00_01415 IPR000160 GGDEF domain MID00_01415 IPR001294 Phytochrome MID00_01415 IPR029016 GAF-like domain superfamily MID00_01415 IPR003018 GAF domain MID00_01415 IPR035919 EAL domain superfamily MID00_01415 IPR001633 EAL domain MID00_01420 IPR028366 Phosphate transport system protein PhoU MID00_01420 IPR038078 PhoU-like domain superfamily MID00_01420 IPR026022 PhoU domain MID00_01425 IPR037171 NagB/RpiA transferase-like MID00_01425 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup MID00_01425 IPR004788 Ribose 5-phosphate isomerase, type A MID00_01430 IPR036249 Thioredoxin-like superfamily MID00_01430 IPR006504 Transcriptional regulator Spx/MgsR MID00_01430 IPR006660 Arsenate reductase-like MID00_01435 IPR035906 MetI-like superfamily MID00_01435 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_01440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_01440 IPR035906 MetI-like superfamily MID00_01445 IPR003593 AAA+ ATPase domain MID00_01445 IPR003439 ABC transporter-like MID00_01445 IPR017871 ABC transporter, conserved site MID00_01445 IPR008995 Molybdate/tungstate binding, C-terminal MID00_01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01445 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit MID00_01445 IPR013611 Transport-associated OB, type 2 MID00_01450 IPR006059 Bacterial extracellular solute-binding protein MID00_01450 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein MID00_01455 IPR022826 3-deoxy-D-manno-octulosonic acid kinase MID00_01455 IPR011009 Protein kinase-like domain superfamily MID00_01465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_01465 IPR041166 LapB, rubredoxin metal binding domain MID00_01465 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01465 IPR004504 DNA repair protein RadA MID00_01465 IPR003593 AAA+ ATPase domain MID00_01465 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain MID00_01465 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_01470 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase MID00_01470 IPR036291 NAD(P)-binding domain superfamily MID00_01470 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_01470 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_01475 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site MID00_01475 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal MID00_01475 IPR001608 Alanine racemase, N-terminal MID00_01475 IPR011079 Alanine racemase, C-terminal MID00_01475 IPR000821 Alanine racemase MID00_01475 IPR029066 PLP-binding barrel MID00_01480 IPR002060 Squalene/phytoene synthase MID00_01480 IPR017827 Hydroxysqualene synthase HpnC MID00_01480 IPR008949 Isoprenoid synthase domain superfamily MID00_01480 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head MID00_01485 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head MID00_01485 IPR019845 Squalene/phytoene synthase, conserved site MID00_01485 IPR008949 Isoprenoid synthase domain superfamily MID00_01490 IPR002937 Amine oxidase MID00_01490 IPR014103 Zeta-carotene desaturase MID00_01490 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_01495 IPR016181 Acyl-CoA N-acyltransferase MID00_01495 IPR000182 GNAT domain MID00_01500 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_01500 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site MID00_01500 IPR029144 Threonine synthase, N-terminal MID00_01500 IPR037158 Threonine synthase, N-terminal domain superfamily MID00_01500 IPR004450 Threonine synthase-like MID00_01500 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_01505 IPR002912 ACT domain MID00_01505 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding MID00_01505 IPR016204 Homoserine dehydrogenase MID00_01505 IPR001342 Homoserine dehydrogenase, catalytic MID00_01505 IPR019811 Homoserine dehydrogenase, conserved site MID00_01505 IPR036291 NAD(P)-binding domain superfamily MID00_01510 IPR004839 Aminotransferase, class I/classII MID00_01510 IPR015424 Pyridoxal phosphate-dependent transferase MID00_01510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_01510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_01515 IPR036748 MTH938-like superfamily MID00_01515 IPR007523 NDUFAF3/Mth938 domain-containing protein MID00_01520 IPR036249 Thioredoxin-like superfamily MID00_01520 IPR013766 Thioredoxin domain MID00_01520 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_01525 IPR002716 PIN domain MID00_01525 IPR029060 PIN-like domain superfamily MID00_01525 IPR003714 PhoH-like protein MID00_01525 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01530 IPR005255 PdxA family MID00_01535 IPR016833 Putative sodium bile acid cotransporter MID00_01535 IPR038770 Sodium/solute symporter superfamily MID00_01540 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01540 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily MID00_01540 IPR003593 AAA+ ATPase domain MID00_01540 IPR007692 DNA helicase, DnaB type MID00_01540 IPR007694 DNA helicase, DnaB-like, C-terminal MID00_01540 IPR007693 DNA helicase, DnaB-like, N-terminal MID00_01540 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal MID00_01545 IPR036935 Ribosomal protein L9, N-terminal domain superfamily MID00_01545 IPR020594 Ribosomal protein L9, bacteria/chloroplast MID00_01545 IPR009027 Ribosomal protein L9/RNase H1, N-terminal MID00_01545 IPR000244 Ribosomal protein L9 MID00_01545 IPR020069 Ribosomal protein L9, C-terminal MID00_01545 IPR020070 Ribosomal protein L9, N-terminal MID00_01545 IPR036791 Ribosomal protein L9, C-terminal domain superfamily MID00_01550 IPR018275 Ribosomal protein S18, conserved site MID00_01550 IPR001648 Ribosomal protein S18 MID00_01550 IPR036870 Ribosomal protein S18 superfamily MID00_01555 IPR000424 Primosome PriB/single-strand DNA-binding MID00_01555 IPR023646 Primosomal replication protein PriB MID00_01555 IPR012340 Nucleic acid-binding, OB-fold MID00_01560 IPR000529 Ribosomal protein S6 MID00_01560 IPR020814 Ribosomal protein S6, plastid/chloroplast MID00_01560 IPR035980 Ribosomal protein S6 superfamily MID00_01560 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 MID00_01565 IPR022838 GTP cyclohydrolase FolE2 MID00_01565 IPR003801 GTP cyclohydrolase FolE2/MptA MID00_01570 IPR029061 Thiamin diphosphate-binding fold MID00_01570 IPR005474 Transketolase, N-terminal MID00_01570 IPR033248 Transketolase, C-terminal domain MID00_01570 IPR020826 Transketolase binding site MID00_01570 IPR005477 Deoxyxylulose-5-phosphate synthase MID00_01570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II MID00_01570 IPR005475 Transketolase-like, pyrimidine-binding domain MID00_01575 IPR000092 Polyprenyl synthetase MID00_01575 IPR033749 Polyprenyl synthetase, conserved site MID00_01575 IPR008949 Isoprenoid synthase domain superfamily MID00_01580 IPR003761 Exonuclease VII, small subunit MID00_01580 IPR037004 Exonuclease VII, small subunit superfamily MID00_01585 IPR001763 Rhodanese-like domain MID00_01585 IPR036873 Rhodanese-like domain superfamily MID00_01600 IPR022919 Peptidase M48, protease HtpX, putative MID00_01600 IPR001915 Peptidase M48 MID00_01625 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein MID00_01625 IPR003841 Sodium-dependent phosphate transport protein MID00_01630 IPR012337 Ribonuclease H-like superfamily MID00_01630 IPR029060 PIN-like domain superfamily MID00_01630 IPR002562 3'-5' exonuclease domain MID00_01630 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal MID00_01630 IPR008918 Helix-hairpin-helix motif, class 2 MID00_01630 IPR002298 DNA polymerase A MID00_01630 IPR018320 DNA polymerase 1 MID00_01630 IPR020045 DNA polymerase I-like, H3TH domain MID00_01630 IPR001098 DNA-directed DNA polymerase, family A, palm domain MID00_01630 IPR019760 DNA-directed DNA polymerase, family A, conserved site MID00_01630 IPR036397 Ribonuclease H superfamily MID00_01630 IPR036279 5'-3' exonuclease, C-terminal domain superfamily MID00_01630 IPR002421 5'-3' exonuclease, N-terminal MID00_01635 IPR031100 LOG family MID00_01635 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG MID00_01640 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter MID00_01640 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_01640 IPR018313 Solute-binding protein family 3, conserved site MID00_01645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_01645 IPR035906 MetI-like superfamily MID00_01645 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_01645 IPR030199 Histidine transport system permease protein HisQ MID00_01650 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_01650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_01650 IPR035906 MetI-like superfamily MID00_01660 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_01660 IPR023753 FAD/NAD(P)-binding domain MID00_01665 IPR042116 GTP-binding protein TypA/BipA, C-terminal MID00_01665 IPR009000 Translation protein, beta-barrel domain superfamily MID00_01665 IPR000795 Transcription factor, GTP-binding domain MID00_01665 IPR005225 Small GTP-binding protein domain MID00_01665 IPR006298 GTP-binding protein TypA MID00_01665 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_01665 IPR031157 Tr-type G domain, conserved site MID00_01665 IPR000640 Elongation factor EFG, domain V-like MID00_01665 IPR035647 EF-G domain III/V-like MID00_01665 IPR035651 BipA, domain V MID00_01665 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01670 IPR032819 tRNA pseudouridylate synthase B, C-terminal MID00_01670 IPR014780 tRNA pseudouridine synthase II, TruB MID00_01670 IPR002501 Pseudouridine synthase II, N-terminal MID00_01670 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_01675 IPR023799 Ribosome-binding factor A domain superfamily MID00_01675 IPR000238 Ribosome-binding factor A MID00_01675 IPR015946 K homology domain-like, alpha/beta MID00_01680 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01680 IPR009061 Putative DNA-binding domain superfamily MID00_01680 IPR013575 Initiation factor 2 associated domain, bacterial MID00_01680 IPR009000 Translation protein, beta-barrel domain superfamily MID00_01680 IPR036925 Translation initiation factor IF-2, domain 3 superfamily MID00_01680 IPR023115 Translation initiation factor IF- 2, domain 3 MID00_01680 IPR015760 Translation initiation factor IF- 2 MID00_01680 IPR000178 Translation initiation factor aIF-2, bacterial-like MID00_01680 IPR000795 Transcription factor, GTP-binding domain MID00_01680 IPR005225 Small GTP-binding protein domain MID00_01680 IPR006847 Translation initiation factor IF-2, N-terminal MID00_01685 IPR025249 KH domain, NusA-like MID00_01685 IPR010213 Transcription termination factor NusA MID00_01685 IPR009019 K homology domain superfamily, prokaryotic type MID00_01685 IPR013735 Transcription factor NusA, N-terminal MID00_01685 IPR010214 Transcription termination factor NusA, C-terminal duplication MID00_01685 IPR022967 RNA-binding domain, S1 MID00_01685 IPR015946 K homology domain-like, alpha/beta MID00_01685 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical MID00_01685 IPR012340 Nucleic acid-binding, OB-fold MID00_01685 IPR003029 S1 domain MID00_01685 IPR004087 K Homology domain MID00_01685 IPR030842 Transcription termination/antitermination protein NusA, bacterial MID00_01685 IPR036555 NusA, N-terminal domain superfamily MID00_01690 IPR028989 Ribosome maturation factor RimP, N-terminal MID00_01690 IPR035956 RimP, N-terminal domain superfamily MID00_01690 IPR028998 Ribosome maturation factor RimP, C-terminal MID00_01690 IPR003728 Ribosome maturation factor RimP MID00_01690 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily MID00_01695 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain MID00_01695 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F MID00_01695 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site MID00_01695 IPR002942 RNA-binding S4 domain MID00_01695 IPR036986 RNA-binding S4 domain superfamily MID00_01695 IPR006145 Pseudouridine synthase, RsuA/RluA MID00_01695 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_01700 IPR005234 Chromosome segregation/condensation protein ScpB MID00_01700 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_01700 IPR036390 Winged helix DNA-binding domain superfamily MID00_01740 IPR012909 PHA accumulation regulator DNA-binding, N-terminal MID00_01740 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR MID00_01740 IPR007897 PHB accumulation regulatory MID00_01745 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_01745 IPR011283 Acetoacetyl-CoA reductase MID00_01745 IPR036291 NAD(P)-binding domain superfamily MID00_01745 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_01750 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I MID00_01750 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain MID00_01750 IPR029058 Alpha/Beta hydrolase fold MID00_01755 IPR011324 Cytotoxic necrotizing factor-like, catalytic MID00_01755 IPR003730 Multi-copper polyphenol oxidoreductase MID00_01755 IPR038371 Multi-copper polyphenol oxidoreductase superfamily MID00_01760 IPR002942 RNA-binding S4 domain MID00_01760 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_01760 IPR006225 Pseudouridine synthase, RluC/RluD MID00_01760 IPR036986 RNA-binding S4 domain superfamily MID00_01760 IPR006145 Pseudouridine synthase, RsuA/RluA MID00_01760 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site MID00_01765 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_01765 IPR039565 Outer membrane lipoprotein BamD-like MID00_01765 IPR017689 Outer membrane protein assembly factor BamD MID00_01770 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_01770 IPR001647 DNA-binding HTH domain, TetR-type MID00_01770 IPR009057 Homeobox-like domain superfamily MID00_01770 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MID00_01770 IPR013572 Transcription regulator MAATS, C-terminal MID00_01775 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_01775 IPR004681 TRAP transporter large membrane protein DctM MID00_01775 IPR007387 TRAP transporter, small membrane protein DctQ MID00_01785 IPR004682 TRAP transporter solute receptor, DctP family MID00_01785 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_01785 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_01795 IPR011051 RmlC-like cupin domain superfamily MID00_01795 IPR010424 Ethanolamine utilisation EutQ MID00_01795 IPR014710 RmlC-like jelly roll fold MID00_01805 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01805 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_01805 IPR006935 Helicase/UvrB, N-terminal MID00_01805 IPR006555 ATP-dependent helicase, C-terminal MID00_01805 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type MID00_01810 IPR032639 Tex protein, YqgF-like domain MID00_01810 IPR023323 Tex-like domain superfamily MID00_01810 IPR006641 YqgF/RNase H-like domain MID00_01810 IPR037027 YqgF/RNase H-like domain superfamily MID00_01810 IPR003029 S1 domain MID00_01810 IPR041692 HHH domain 9 MID00_01810 IPR010994 RuvA domain 2-like MID00_01810 IPR012337 Ribonuclease H-like superfamily MID00_01810 IPR012340 Nucleic acid-binding, OB-fold MID00_01810 IPR018974 Tex-like protein, N-terminal MID00_01810 IPR022967 RNA-binding domain, S1 MID00_01810 IPR023319 Tex-like protein, HTH domain superfamily MID00_01825 IPR002306 Tryptophan-tRNA ligase MID00_01825 IPR002305 Aminoacyl-tRNA synthetase, class Ic MID00_01825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_01825 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_01825 IPR024109 Tryptophan-tRNA ligase, bacterial-type MID00_01825 IPR036913 YegP-like superfamily MID00_01830 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01830 IPR030870 Cell division protein ZapE MID00_01830 IPR005654 ATPase, AFG1-like MID00_01835 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site MID00_01835 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_01835 IPR023753 FAD/NAD(P)-binding domain MID00_01835 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_01835 IPR006258 Dihydrolipoamide dehydrogenase MID00_01835 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I MID00_01835 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MID00_01840 IPR000089 Biotin/lipoyl attachment MID00_01840 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain MID00_01840 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily MID00_01840 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site MID00_01840 IPR011053 Single hybrid motif MID00_01840 IPR004167 Peripheral subunit-binding domain MID00_01840 IPR006255 Dihydrolipoamide succinyltransferase MID00_01840 IPR036625 E3-binding domain superfamily MID00_01845 IPR029061 Thiamin diphosphate-binding fold MID00_01845 IPR005475 Transketolase-like, pyrimidine-binding domain MID00_01845 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal MID00_01845 IPR001017 Dehydrogenase, E1 component MID00_01845 IPR011603 2-oxoglutarate dehydrogenase E1 component MID00_01845 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily MID00_01845 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain MID00_01850 IPR015884 Malic enzyme, conserved site MID00_01850 IPR012301 Malic enzyme, N-terminal domain MID00_01850 IPR037062 Malic enzyme, N-terminal domain superfamily MID00_01850 IPR012302 Malic enzyme, NAD-binding MID00_01850 IPR012188 NAD(P)-dependent malic enzyme MID00_01850 IPR036291 NAD(P)-binding domain superfamily MID00_01850 IPR042113 Phosphate acetyltransferase, domain 1 MID00_01850 IPR042112 Phosphate acetyltransferase, domain 2 MID00_01850 IPR002505 Phosphate acetyl/butaryl transferase MID00_01860 IPR014743 Chloride channel, core MID00_01860 IPR001807 Chloride channel, voltage gated MID00_01865 IPR003804 L-lactate permease MID00_01870 IPR011711 GntR, C-terminal MID00_01870 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_01870 IPR000524 Transcription regulator HTH, GntR MID00_01870 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_01870 IPR036390 Winged helix DNA-binding domain superfamily MID00_01875 IPR010953 Citrate synthase, type I MID00_01875 IPR036969 Citrate synthase superfamily MID00_01875 IPR024176 Citrate synthase, bacterial-type MID00_01875 IPR016142 Citrate synthase-like, large alpha subdomain MID00_01875 IPR016143 Citrate synthase-like, small alpha subdomain MID00_01875 IPR002020 Citrate synthase MID00_01875 IPR019810 Citrate synthase active site MID00_01880 IPR036714 Flavinator of succinate dehydrogenase superfamily MID00_01880 IPR005631 Flavinator of succinate dehydrogenase MID00_01885 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_01885 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_01885 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal MID00_01885 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein MID00_01885 IPR009051 Alpha-helical ferredoxin MID00_01885 IPR012675 Beta-grasp domain superfamily MID00_01885 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_01885 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_01890 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit MID00_01890 IPR011281 Succinate dehydrogenase, flavoprotein subunit MID00_01890 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily MID00_01890 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site MID00_01890 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily MID00_01890 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain MID00_01890 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_01890 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal MID00_01900 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit MID00_01900 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site MID00_01900 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit MID00_01900 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit MID00_01905 IPR036390 Winged helix DNA-binding domain superfamily MID00_01905 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_01905 IPR000524 Transcription regulator HTH, GntR MID00_01905 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MID00_01905 IPR011663 UbiC transcription regulator-associated MID00_01910 IPR001557 L-lactate/malate dehydrogenase MID00_01910 IPR022383 Lactate/malate dehydrogenase, C-terminal MID00_01910 IPR001236 Lactate/malate dehydrogenase, N-terminal MID00_01910 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal MID00_01910 IPR010945 Malate dehydrogenase, type 2 MID00_01910 IPR036291 NAD(P)-binding domain superfamily MID00_01920 IPR011701 Major facilitator superfamily MID00_01920 IPR020846 Major facilitator superfamily domain MID00_01920 IPR036259 MFS transporter superfamily MID00_01925 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_01925 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_01925 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal MID00_01925 IPR025944 Sigma-54 interaction domain, conserved site MID00_01925 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_01925 IPR002197 DNA binding HTH domain, Fis-type MID00_01925 IPR009057 Homeobox-like domain superfamily MID00_01925 IPR003593 AAA+ ATPase domain MID00_01925 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR MID00_01930 IPR039556 ICL/PEPM domain MID00_01930 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site MID00_01930 IPR012695 2-methylisocitrate lyase MID00_01930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_01930 IPR040442 Pyruvate kinase-like domain superfamily MID00_01935 IPR036969 Citrate synthase superfamily MID00_01935 IPR024176 Citrate synthase, bacterial-type MID00_01935 IPR019810 Citrate synthase active site MID00_01935 IPR016143 Citrate synthase-like, small alpha subdomain MID00_01935 IPR016142 Citrate synthase-like, large alpha subdomain MID00_01935 IPR011278 2-methylcitrate synthase/citrate synthase type I MID00_01935 IPR002020 Citrate synthase MID00_01950 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 MID00_01950 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain MID00_01950 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MID00_01950 IPR018136 Aconitase family, 4Fe-4S cluster binding site MID00_01950 IPR036008 Aconitase, iron-sulfur domain MID00_01950 IPR004406 Aconitase B MID00_01950 IPR015933 Aconitase B, HEAT-like domain MID00_01950 IPR015929 Aconitase B, swivel MID00_01950 IPR015932 Aconitase, domain 2 MID00_01950 IPR036288 Aconitase B, HEAT-like domain superfamily MID00_01955 IPR026289 Solute binding protein, TakP-like MID00_01955 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_01955 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_01955 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_01955 IPR041721 Lactate-binding periplasmic protein TTHA0766 MID00_01965 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_01965 IPR004681 TRAP transporter large membrane protein DctM MID00_01965 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_01965 IPR004681 TRAP transporter large membrane protein DctM MID00_01980 IPR008991 Translation protein SH3-like domain superfamily MID00_01980 IPR011768 Translation elongation factor P MID00_01980 IPR013852 Translation elongation factor P/YeiP, conserved site MID00_01980 IPR020599 Translation elongation factor P/YeiP MID00_01980 IPR013185 Translation elongation factor, KOW-like MID00_01980 IPR015365 Elongation factor P, C-terminal MID00_01980 IPR001059 Translation elongation factor P/YeiP, central MID00_01980 IPR012340 Nucleic acid-binding, OB-fold MID00_01980 IPR014722 Ribosomal protein L2, domain 2 MID00_01985 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase MID00_01985 IPR036291 NAD(P)-binding domain superfamily MID00_01985 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_01985 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_02005 IPR036291 NAD(P)-binding domain superfamily MID00_02005 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_02005 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_02015 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA MID00_02015 IPR018211 Alcohol dehydrogenase, iron-type, conserved site MID00_02015 IPR039697 Iron-type alcohol dehydrogenase-like MID00_02020 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_02020 IPR015590 Aldehyde dehydrogenase domain MID00_02020 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_02020 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_02020 IPR016161 Aldehyde/histidinol dehydrogenase MID00_02020 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_02025 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_02025 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02025 IPR025944 Sigma-54 interaction domain, conserved site MID00_02025 IPR009057 Homeobox-like domain superfamily MID00_02025 IPR029016 GAF-like domain superfamily MID00_02025 IPR003018 GAF domain MID00_02025 IPR002197 DNA binding HTH domain, Fis-type MID00_02025 IPR003593 AAA+ ATPase domain MID00_02035 IPR003593 AAA+ ATPase domain MID00_02035 IPR003439 ABC transporter-like MID00_02035 IPR017871 ABC transporter, conserved site MID00_02035 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal MID00_02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_02040 IPR035906 MetI-like superfamily MID00_02040 IPR025966 Oligopeptide transport permease C-like, N-terminal domain MID00_02045 IPR035906 MetI-like superfamily MID00_02045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_02050 IPR030678 Peptide/nickel binding protein, MppA-type MID00_02050 IPR039424 Solute-binding protein family 5 MID00_02050 IPR023765 Solute-binding protein family 5, conserved site MID00_02050 IPR000914 Solute-binding protein family 5 domain MID00_02065 IPR006089 Acyl-CoA dehydrogenase, conserved site MID00_02065 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_02065 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_02065 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_02065 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_02065 IPR034184 Putative acyl-CoA dehydrogenase AidB MID00_02065 IPR041504 Adaptive response protein AidB, N-terminal MID00_02070 IPR004488 Magnesium/cobalt transport protein CorA MID00_02070 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB MID00_02075 IPR006696 Protein of unknown function DUF423 MID00_02080 IPR001365 Adenosine/AMP deaminase domain MID00_02080 IPR028892 Adenine deaminase type 2 MID00_02080 IPR006330 Adenosine/adenine deaminase MID00_02080 IPR032466 Metal-dependent hydrolase MID00_02085 IPR011034 Formyl transferase-like, C-terminal domain superfamily MID00_02085 IPR003180 Methylpurine-DNA glycosylase MID00_02085 IPR036995 Methylpurine-DNA glycosylase superfamily MID00_02100 IPR008254 Flavodoxin/nitric oxide synthase MID00_02100 IPR029039 Flavoprotein-like superfamily MID00_02100 IPR010089 Flavoprotein WrbA-like MID00_02100 IPR005025 NADPH-dependent FMN reductase-like MID00_02100 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic MID00_02105 IPR010987 Glutathione S-transferase, C-terminal-like MID00_02105 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_02105 IPR040079 Glutathione Transferase family MID00_02105 IPR004045 Glutathione S-transferase, N-terminal MID00_02105 IPR016639 Glutathione S-transferase Omega/GSH MID00_02105 IPR036249 Thioredoxin-like superfamily MID00_02110 IPR020920 L-lactate dehydrogenase, bacterial MID00_02110 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site MID00_02110 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent MID00_02110 IPR000262 FMN-dependent dehydrogenase MID00_02110 IPR013785 Aldolase-type TIM barrel MID00_02110 IPR037396 FMN hydroxy acid dehydrogenase domain MID00_02135 IPR029035 DHS-like NAD/FAD-binding domain superfamily MID00_02135 IPR012136 NADP transhydrogenase, beta subunit MID00_02135 IPR034300 NADP transhydrogenase beta-like domain MID00_02140 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal MID00_02145 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal MID00_02145 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 MID00_02145 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 MID00_02145 IPR036291 NAD(P)-binding domain superfamily MID00_02145 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain MID00_02150 IPR003593 AAA+ ATPase domain MID00_02150 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA MID00_02150 IPR003439 ABC transporter-like MID00_02150 IPR017871 ABC transporter, conserved site MID00_02150 IPR008995 Molybdate/tungstate binding, C-terminal MID00_02150 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02150 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit MID00_02150 IPR013611 Transport-associated OB, type 2 MID00_02155 IPR011866 Sulphate ABC transporter, permease protein CysW MID00_02155 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_02155 IPR035906 MetI-like superfamily MID00_02155 IPR005667 Sulphate ABC transporter permease protein 2 MID00_02165 IPR011004 Trimeric LpxA-like superfamily MID00_02165 IPR023446 Carnitine operon protein CaiE MID00_02165 IPR001451 Hexapeptide repeat MID00_02175 IPR003010 Carbon-nitrogen hydrolase MID00_02175 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_02175 IPR000132 Nitrilase/cyanide hydratase, conserved site MID00_02180 IPR009057 Homeobox-like domain superfamily MID00_02180 IPR037923 Transcription regulator HTH-like MID00_02180 IPR018060 DNA binding HTH domain, AraC-type MID00_02180 IPR018062 HTH domain AraC-type, conserved site MID00_02180 IPR020449 Transcription regulator HTH, AraC- type MID00_02180 IPR023609 Transcription regulator HTH, RhaS MID00_02180 IPR003313 AraC-type arabinose-binding/dimerisation domain MID00_02180 IPR014710 RmlC-like jelly roll fold MID00_02190 IPR001107 Band 7 domain MID00_02190 IPR036013 Band 7/SPFH domain superfamily MID00_02190 IPR010200 HflC MID00_02210 IPR027795 CASTOR, ACT domain MID00_02210 IPR018042 Aspartate kinase, conserved site MID00_02210 IPR001341 Aspartate kinase MID00_02210 IPR001048 Aspartate/glutamate/uridylate kinase MID00_02210 IPR005260 Aspartate kinase, monofunctional class MID00_02210 IPR041740 Aspartokinase catalytic domain MID00_02210 IPR036393 Acetylglutamate kinase-like superfamily MID00_02210 IPR002912 ACT domain MID00_02215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_02215 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal MID00_02215 IPR012094 tRNA(Ile)-lysidine synthase MID00_02215 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal MID00_02215 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain MID00_02220 IPR001095 Acetyl-CoA carboxylase, alpha subunit MID00_02220 IPR029045 ClpP/crotonase-like domain superfamily MID00_02220 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal MID00_02230 IPR015803 Cysteine-tRNA ligase MID00_02230 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR MID00_02230 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase MID00_02230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_02230 IPR032678 tRNA synthetases class I, catalytic domain MID00_02230 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding MID00_02240 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain MID00_02240 IPR029000 Cyclophilin-like domain superfamily MID00_02240 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase MID00_02240 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site MID00_02245 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type MID00_02245 IPR010138 UDP-2,3-diacylglucosamine hydrolase MID00_02250 IPR003824 Undecaprenyl-diphosphatase UppP MID00_02255 IPR000644 CBS domain MID00_02255 IPR036318 FAD-binding, type PCMH-like superfamily MID00_02255 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_02255 IPR005496 Integral membrane protein TerC MID00_02255 IPR005170 Transporter-associated domain MID00_02260 IPR020583 Inositol monophosphatase, metal-binding site MID00_02260 IPR000760 Inositol monophosphatase-like MID00_02260 IPR020550 Inositol monophosphatase, conserved site MID00_02260 IPR022337 Inositol monophosphatase, SuhB MID00_02260 IPR033942 Inositol monophosphatase MID00_02265 IPR029028 Alpha/beta knot methyltransferases MID00_02265 IPR001537 tRNA/rRNA methyltransferase, SpoU type MID00_02265 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MID00_02265 IPR004384 RNA methyltransferase TrmJ/LasT MID00_02275 IPR006161 Conserved hypothetical protein CHP00336 MID00_02275 IPR006160 Short chain fatty acid transporter AtoE MID00_02280 IPR000120 Amidase MID00_02280 IPR020556 Amidase, conserved site MID00_02280 IPR023631 Amidase signature domain MID00_02280 IPR036928 Amidase signature (AS) superfamily MID00_02280 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit MID00_02285 IPR005777 Acetyl-S-ACP:malonate ACP transferase MID00_02285 IPR037171 NagB/RpiA transferase-like MID00_02290 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein MID00_02290 IPR009662 Malonate decarboxylase delta subunit MID00_02295 IPR034733 Acetyl-CoA carboxylase MID00_02295 IPR029045 ClpP/crotonase-like domain superfamily MID00_02295 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal MID00_02295 IPR017556 Biotin-independent malonate decarboxylase, beta subunit MID00_02310 IPR002736 Triphosphoribosyl-dephospho-CoA protein MID00_02310 IPR017555 Triphosphoribosyl-dephospho-CoA synthase MID00_02315 IPR020807 Polyketide synthase, dehydratase domain MID00_02315 IPR036736 ACP-like superfamily MID00_02315 IPR014043 Acyl transferase MID00_02315 IPR020806 Polyketide synthase, phosphopantetheine-binding domain MID00_02315 IPR009081 Phosphopantetheine binding ACP domain MID00_02315 IPR042104 Polyketide synthase, dehydratase domain superfamily MID00_02315 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MID00_02315 IPR018201 Beta-ketoacyl synthase, active site MID00_02315 IPR014031 Beta-ketoacyl synthase, C-terminal MID00_02315 IPR013968 Polyketide synthase, ketoreductase domain MID00_02315 IPR014030 Beta-ketoacyl synthase, N-terminal MID00_02315 IPR016039 Thiolase-like MID00_02315 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding MID00_02315 IPR036291 NAD(P)-binding domain superfamily MID00_02315 IPR032821 Ketoacyl-synthetase, C-terminal extension MID00_02315 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MID00_02315 IPR006162 Phosphopantetheine attachment site MID00_02315 IPR001227 Acyl transferase domain superfamily MID00_02320 IPR005119 LysR, substrate-binding MID00_02320 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain MID00_02320 IPR036390 Winged helix DNA-binding domain superfamily MID00_02320 IPR000847 Transcription regulator HTH, LysR MID00_02320 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02325 IPR010920 LSM domain superfamily MID00_02325 IPR006685 Mechanosensitive ion channel MscS MID00_02325 IPR011066 Mechanosensitive ion channel MscS, C-terminal MID00_02325 IPR006686 Mechanosensitive ion channel MscS, conserved site MID00_02325 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 MID00_02325 IPR023408 Mechanosensitive ion channel MscS domain superfamily MID00_02325 IPR008910 Conserved TM helix MID00_02335 IPR019949 Luciferase family oxidoreductase, group 1 MID00_02335 IPR011251 Luciferase-like domain MID00_02335 IPR036661 Luciferase-like domain superfamily MID00_02340 IPR036390 Winged helix DNA-binding domain superfamily MID00_02340 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02340 IPR000847 Transcription regulator HTH, LysR MID00_02340 IPR037421 HTH-type transcriptional regulator ClcR, PBP2 domain MID00_02340 IPR005119 LysR, substrate-binding MID00_02345 IPR005064 Bordetella uptake gene MID00_02345 IPR042100 Bordetella uptake gene, domain 1 MID00_02350 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_02360 IPR017871 ABC transporter, conserved site MID00_02360 IPR003439 ABC transporter-like MID00_02360 IPR011527 ABC transporter type 1, transmembrane domain MID00_02360 IPR003593 AAA+ ATPase domain MID00_02360 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02360 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_02360 IPR039421 Type I protein exporter MID00_02365 IPR018321 Glucosamine-6-phosphate isomerase, conserved site MID00_02365 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase MID00_02365 IPR004547 Glucosamine-6-phosphate isomerase MID00_02365 IPR037171 NagB/RpiA transferase-like MID00_02370 IPR003423 Outer membrane efflux protein MID00_02370 IPR010131 RND efflux system, outer membrane lipoprotein, NodT MID00_02375 IPR017871 ABC transporter, conserved site MID00_02375 IPR017911 ABC transporter, macrolide export, ATP-binding domain MID00_02375 IPR025857 MacB-like periplasmic core domain MID00_02375 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02375 IPR003593 AAA+ ATPase domain MID00_02375 IPR003838 ABC transporter permease protein domain MID00_02375 IPR003439 ABC transporter-like MID00_02380 IPR006143 RND efflux pump, membrane fusion protein MID00_02380 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_02380 IPR030190 Macrolide export protein MacA MID00_02385 IPR039423 TonB-dependent receptor-like MID00_02385 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_02385 IPR030149 TonB-dependent siderophore receptor FcuA/FatA MID00_02385 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_02385 IPR010917 TonB-dependent receptor, conserved site MID00_02385 IPR010105 TonB-dependent siderophore receptor MID00_02385 IPR010916 TonB box, conserved site MID00_02385 IPR012910 TonB-dependent receptor, plug domain MID00_02385 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_02390 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily MID00_02390 IPR015943 WD40/YVTN repeat-like-containing domain superfamily MID00_02405 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_02405 IPR001279 Metallo-beta-lactamase MID00_02410 IPR011991 ArsR-like helix-turn-helix domain MID00_02410 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02410 IPR001845 HTH ArsR-type DNA-binding domain MID00_02410 IPR036390 Winged helix DNA-binding domain superfamily MID00_02415 IPR001763 Rhodanese-like domain MID00_02415 IPR036873 Rhodanese-like domain superfamily MID00_02415 IPR021309 Protein of unknown function DUF2892 MID00_02425 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI MID00_02425 IPR042217 Type IV secretion system, VirB10/TrbI MID00_02440 IPR014150 Conjugal transfer, TrbL MID00_02440 IPR007688 Plasmid conjugal transfer TrbL/VirB6 MID00_02450 IPR004346 CagE, TrbE, VirB component of type IV transporter system MID00_02450 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain MID00_02450 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02450 IPR003593 AAA+ ATPase domain MID00_02460 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 MID00_02465 IPR014149 Conjugative transfer, TrbB MID00_02465 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02465 IPR001482 Type II/IV secretion system protein MID00_02475 IPR003688 Type IV secretion system protein TraG/VirD4 MID00_02475 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02485 IPR036390 Winged helix DNA-binding domain superfamily MID00_02485 IPR005119 LysR, substrate-binding MID00_02485 IPR000847 Transcription regulator HTH, LysR MID00_02485 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02490 IPR003010 Carbon-nitrogen hydrolase MID00_02490 IPR004563 Apolipoprotein N-acyltransferase MID00_02490 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_02505 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_02505 IPR023753 FAD/NAD(P)-binding domain MID00_02505 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_02505 IPR006258 Dihydrolipoamide dehydrogenase MID00_02505 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I MID00_02505 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MID00_02505 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site MID00_02510 IPR002781 Transmembrane protein TauE-like MID00_02515 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily MID00_02515 IPR033954 Disulphide bond isomerase, DsbC/G MID00_02515 IPR012336 Thioredoxin-like fold MID00_02515 IPR036249 Thioredoxin-like superfamily MID00_02525 IPR013766 Thioredoxin domain MID00_02525 IPR036249 Thioredoxin-like superfamily MID00_02525 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_02530 IPR036249 Thioredoxin-like superfamily MID00_02530 IPR017937 Thioredoxin, conserved site MID00_02530 IPR013766 Thioredoxin domain MID00_02530 IPR022910 Thiol:disulphide interchange protein DsbD MID00_02530 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily MID00_02530 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain MID00_02530 IPR035671 DsbD gamma MID00_02530 IPR003834 Cytochrome C biogenesis protein, transmembrane domain MID00_02535 IPR013727 Two-component sensor kinase, N-terminal MID00_02535 IPR003660 HAMP domain MID00_02535 IPR003594 Histidine kinase/HSP90-like ATPase MID00_02535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_02535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_02535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_02535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_02535 IPR005467 Histidine kinase domain MID00_02540 IPR011006 CheY-like superfamily MID00_02540 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_02540 IPR016032 Signal transduction response regulator, C-terminal effector MID00_02540 IPR001789 Signal transduction response regulator, receiver domain MID00_02540 IPR039420 Transcriptional regulatory protein WalR-like MID00_02540 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02545 IPR023616 Cytochrome c oxidase-like, subunit I domain MID00_02545 IPR004677 Cytochrome c oxidase cbb3-type, subunit I MID00_02545 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site MID00_02545 IPR000883 Cytochrome c oxidase subunit I MID00_02545 IPR036927 Cytochrome c oxidase-like, subunit I superfamily MID00_02555 IPR009056 Cytochrome c-like domain MID00_02555 IPR036909 Cytochrome c-like domain superfamily MID00_02555 IPR024167 Cytochrome c4-like MID00_02560 IPR009056 Cytochrome c-like domain MID00_02560 IPR036909 Cytochrome c-like domain superfamily MID00_02565 IPR027256 P-type ATPase, subfamily IB MID00_02565 IPR023299 P-type ATPase, cytoplasmic domain N MID00_02565 IPR018303 P-type ATPase, phosphorylation site MID00_02565 IPR023298 P-type ATPase, transmembrane domain superfamily MID00_02565 IPR008250 P-type ATPase, A domain superfamily MID00_02565 IPR036412 HAD-like superfamily MID00_02565 IPR023214 HAD superfamily MID00_02565 IPR017969 Heavy-metal-associated, conserved site MID00_02565 IPR006122 Heavy metal-associated domain, copper ion-binding MID00_02565 IPR006121 Heavy metal-associated domain, HMA MID00_02565 IPR001757 P-type ATPase MID00_02565 IPR036163 Heavy metal-associated domain superfamily MID00_02570 IPR013766 Thioredoxin domain MID00_02570 IPR036249 Thioredoxin-like superfamily MID00_02570 IPR005746 Thioredoxin MID00_02570 IPR017937 Thioredoxin, conserved site MID00_02575 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_02575 IPR023753 FAD/NAD(P)-binding domain MID00_02575 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site MID00_02575 IPR005982 Thioredoxin reductase MID00_02580 IPR003593 AAA+ ATPase domain MID00_02580 IPR003439 ABC transporter-like MID00_02580 IPR017871 ABC transporter, conserved site MID00_02580 IPR005895 ABC transporter, haem export, CcmA MID00_02580 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02585 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria MID00_02585 IPR003544 Cytochrome c-type biogenesis protein CcmB MID00_02590 IPR003557 Cytochrome c-type biogenesis protein CcmC MID00_02590 IPR002541 Cytochrome c assembly protein MID00_02600 IPR004329 CcmE/CycJ protein MID00_02600 IPR036127 CcmE-like superfamily MID00_02605 IPR002541 Cytochrome c assembly protein MID00_02605 IPR003567 Cytochrome c-type biogenesis protein MID00_02605 IPR003568 Cytochrome c-type biogenesis protein CcmF MID00_02605 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal MID00_02610 IPR036249 Thioredoxin-like superfamily MID00_02610 IPR013740 Redoxin MID00_02610 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE MID00_02610 IPR013766 Thioredoxin domain MID00_02610 IPR017937 Thioredoxin, conserved site MID00_02615 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily MID00_02615 IPR005616 CcmH/CycL/Ccl2/NrfF family MID00_02620 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_02620 IPR017560 Cytochrome c-type biogenesis protein CcmI MID00_02620 IPR019734 Tetratricopeptide repeat MID00_02620 IPR013026 Tetratricopeptide repeat-containing domain MID00_02635 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF MID00_02635 IPR036286 LexA/Signal peptidase-like superfamily MID00_02635 IPR019533 Peptidase S26 MID00_02650 IPR025669 AAA domain MID00_02650 IPR009061 Putative DNA-binding domain superfamily MID00_02650 IPR000551 MerR-type HTH domain MID00_02650 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02650 IPR017818 Plasmid partitioning protein, RepA MID00_02685 IPR007948 Protein of unknown function DUF736 MID00_02695 IPR001405 Uncharacterised protein family UPF0758 MID00_02695 IPR037518 MPN domain MID00_02695 IPR025657 RadC-like JAB domain MID00_02695 IPR010994 RuvA domain 2-like MID00_02695 IPR020891 Uncharacterised protein family UPF0758, conserved site MID00_02700 IPR004437 ParB/RepB/Spo0J partition protein MID00_02700 IPR036086 ParB/Sulfiredoxin superfamily MID00_02700 IPR003115 ParB/Sulfiredoxin MID00_02705 IPR026325 Protein of unknown function DUF932 MID00_02730 IPR013762 Integrase-like, catalytic domain superfamily MID00_02730 IPR022000 Min27-like integrase, DNA-binding domain MID00_02730 IPR002104 Integrase, catalytic domain MID00_02730 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_02730 IPR010998 Integrase/recombinase, N-terminal MID00_02735 IPR036678 MutS, connector domain superfamily MID00_02735 IPR000432 DNA mismatch repair protein MutS, C-terminal MID00_02735 IPR005748 DNA mismatch repair protein MutS MID00_02735 IPR007695 DNA mismatch repair protein MutS-like, N-terminal MID00_02735 IPR017261 DNA mismatch repair protein MutS/MSH MID00_02735 IPR007861 DNA mismatch repair protein MutS, clamp MID00_02735 IPR007696 DNA mismatch repair protein MutS, core MID00_02735 IPR007860 DNA mismatch repair protein MutS, connector domain MID00_02735 IPR036187 DNA mismatch repair protein MutS, core domain superfamily MID00_02735 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02735 IPR016151 DNA mismatch repair protein MutS, N-terminal MID00_02740 IPR003347 JmjC domain MID00_02740 IPR039994 JmjC domain-containing MID00_02745 IPR004711 Benzoate transporter MID00_02750 IPR001128 Cytochrome P450 MID00_02750 IPR002397 Cytochrome P450, B-class MID00_02750 IPR017972 Cytochrome P450, conserved site MID00_02750 IPR036396 Cytochrome P450 superfamily MID00_02755 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type MID00_02755 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria MID00_02755 IPR015424 Pyridoxal phosphate-dependent transferase MID00_02755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_02755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_02755 IPR004839 Aminotransferase, class I/classII MID00_02760 IPR005814 Aminotransferase class-III MID00_02760 IPR015424 Pyridoxal phosphate-dependent transferase MID00_02760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_02760 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA MID00_02760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_02765 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02765 IPR004472 Dethiobiotin synthase BioD MID00_02780 IPR014524 Outer membrane protein assembly factor BamC MID00_02780 IPR042268 Outer membrane protein assembly factor BamC, C-terminal MID00_02780 IPR010653 NlpB/DapX lipoprotein MID00_02785 IPR002220 DapA-like MID00_02785 IPR020624 Schiff base-forming aldolase, conserved site MID00_02785 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA MID00_02785 IPR013785 Aldolase-type TIM barrel MID00_02785 IPR020625 Schiff base-forming aldolase, active site MID00_02790 IPR008915 Peptidase M50 MID00_02795 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily MID00_02795 IPR006070 YrdC-like domain MID00_02810 IPR022924 Cardiolipin synthase MID00_02810 IPR027379 Cardiolipin synthase N-terminal MID00_02810 IPR025202 Phospholipase D-like domain MID00_02810 IPR001736 Phospholipase D/Transphosphatidylase MID00_02810 IPR030874 Cardiolipin synthase, Firmicutes-type MID00_02815 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02815 IPR012906 PaaX-like, N-terminal MID00_02815 IPR013225 PaaX-like, C-terminal MID00_02815 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX MID00_02820 IPR014083 Cation/acetate symporter ActP MID00_02820 IPR018212 Sodium/solute symporter, conserved site MID00_02820 IPR001734 Sodium/solute symporter MID00_02820 IPR038377 Sodium/glucose symporter superfamily MID00_02840 IPR005119 LysR, substrate-binding MID00_02840 IPR000847 Transcription regulator HTH, LysR MID00_02840 IPR036390 Winged helix DNA-binding domain superfamily MID00_02840 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02850 IPR017850 Alkaline-phosphatase-like, core domain superfamily MID00_02850 IPR000917 Sulfatase, N-terminal MID00_02850 IPR012160 Lipoteichoic acid synthase-like MID00_02860 IPR007353 Protein of unknown function DUF421 MID00_02860 IPR023090 UPF0702, alpha/beta domain superfamily MID00_02865 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit MID00_02865 IPR008168 Cytochrome c, class IC MID00_02865 IPR036909 Cytochrome c-like domain superfamily MID00_02865 IPR009056 Cytochrome c-like domain MID00_02870 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_02870 IPR001613 Flavin amine oxidase MID00_02870 IPR002937 Amine oxidase MID00_02885 IPR036390 Winged helix DNA-binding domain superfamily MID00_02885 IPR000847 Transcription regulator HTH, LysR MID00_02885 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02885 IPR005119 LysR, substrate-binding MID00_02900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_02900 IPR003594 Histidine kinase/HSP90-like ATPase MID00_02900 IPR003660 HAMP domain MID00_02900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_02900 IPR005467 Histidine kinase domain MID00_02900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_02905 IPR011006 CheY-like superfamily MID00_02905 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_02905 IPR039420 Transcriptional regulatory protein WalR-like MID00_02905 IPR001789 Signal transduction response regulator, receiver domain MID00_02905 IPR016032 Signal transduction response regulator, C-terminal effector MID00_02905 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_02920 IPR020845 AMP-binding, conserved site MID00_02920 IPR025110 AMP-binding enzyme, C-terminal domain MID00_02920 IPR042099 AMP-dependent synthetase-like superfamily MID00_02920 IPR000873 AMP-dependent synthetase/ligase MID00_02925 IPR003593 AAA+ ATPase domain MID00_02925 IPR003439 ABC transporter-like MID00_02925 IPR017871 ABC transporter, conserved site MID00_02925 IPR015850 ABC transporter, phosphate import, PstB MID00_02925 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02925 IPR005670 Phosphate transport system permease protein 1 MID00_02930 IPR035906 MetI-like superfamily MID00_02930 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_02930 IPR005672 Phosphate transport system permease protein PstA MID00_02935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_02935 IPR035906 MetI-like superfamily MID00_02935 IPR011864 Phosphate ABC transporter, permease protein PstC MID00_02940 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS MID00_02940 IPR024370 PBP domain MID00_02945 IPR024953 Polyphosphate kinase middle domain MID00_02945 IPR036832 Polyphosphate kinase N-terminal domain superfamily MID00_02945 IPR025198 Polyphosphate kinase N-terminal domain MID00_02945 IPR025200 Polyphosphate kinase C-terminal domain 2 MID00_02945 IPR003414 Polyphosphate kinase MID00_02945 IPR041108 Polyphosphate kinase, C-terminal domain 1 MID00_02945 IPR036830 Polyphosphate kinase middle domain superfamily MID00_02950 IPR003695 Ppx/GppA phosphatase MID00_02950 IPR022371 Exopolyphosphatase MID00_02950 IPR030673 Pyrophosphatase, GppA/Ppx-type MID00_02960 IPR005841 Alpha-D-phosphohexomutase superfamily MID00_02960 IPR006352 Phosphoglucosamine mutase, bacterial type MID00_02960 IPR016066 Alpha-D-phosphohexomutase, conserved site MID00_02960 IPR005843 Alpha-D-phosphohexomutase, C-terminal MID00_02960 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily MID00_02960 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II MID00_02960 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III MID00_02960 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I MID00_02960 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III MID00_02965 IPR006390 Dihydropteroate synthase MID00_02965 IPR011005 Dihydropteroate synthase-like MID00_02965 IPR000489 Pterin-binding domain MID00_02970 IPR037219 Peptidase M41-like MID00_02970 IPR000642 Peptidase M41 MID00_02970 IPR011546 Peptidase M41, FtsH extracellular MID00_02970 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_02970 IPR005936 Peptidase, FtsH MID00_02970 IPR003959 ATPase, AAA-type, core MID00_02970 IPR041569 AAA ATPase, AAA+ lid domain MID00_02970 IPR003593 AAA+ ATPase domain MID00_02970 IPR003960 ATPase, AAA-type, conserved site MID00_02975 IPR015507 Ribosomal RNA large subunit methyltransferase E MID00_02975 IPR002877 Ribosomal RNA methyltransferase FtsJ domain MID00_02975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_02980 IPR001890 RNA-binding, CRM domain MID00_02980 IPR017924 RNA-binding protein YhbY MID00_02980 IPR035920 YhbY-like superfamily MID00_02985 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal MID00_02985 IPR028624 Transcription elongation factor GreA/GreB MID00_02985 IPR006359 Transcription elongation factor GreA MID00_02985 IPR023459 Transcription elongation factor GreA/GreB family MID00_02985 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily MID00_02985 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal MID00_02985 IPR018151 Transcription elongation factor, GreA/GreB, conserved site MID00_02985 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily MID00_02990 IPR006042 Xanthine/uracil permease MID00_02990 IPR006043 Xanthine/uracil/vitamin C permease MID00_02990 IPR019918 Pyrimidine permease RutG, predicted MID00_02995 IPR013078 Histidine phosphatase superfamily, clade-1 MID00_02995 IPR029033 Histidine phosphatase superfamily MID00_02995 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site MID00_02995 IPR023086 Phosphoglycerate mutase, GpmB, probable MID00_03000 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase MID00_03000 IPR036291 NAD(P)-binding domain superfamily MID00_03000 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_03000 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_03010 IPR016185 Pre-ATP-grasp domain superfamily MID00_03010 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain MID00_03010 IPR036914 Methylglyoxal synthase-like domain superfamily MID00_03010 IPR011607 Methylglyoxal synthase-like domain MID00_03010 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain MID00_03010 IPR011761 ATP-grasp fold MID00_03010 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily MID00_03010 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain MID00_03010 IPR006275 Carbamoyl-phosphate synthase, large subunit MID00_03010 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain MID00_03015 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain MID00_03015 IPR017926 Glutamine amidotransferase MID00_03015 IPR029062 Class I glutamine amidotransferase-like MID00_03015 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily MID00_03015 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain MID00_03015 IPR006274 Carbamoyl-phosphate synthase, small subunit MID00_03020 IPR013785 Aldolase-type TIM barrel MID00_03020 IPR001585 Transaldolase/Fructose-6-phosphate aldolase MID00_03020 IPR004730 Transaldolase type 1 MID00_03020 IPR018225 Transaldolase, active site MID00_03025 IPR013216 Methyltransferase type 11 MID00_03025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_03030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_03030 IPR035906 MetI-like superfamily MID00_03035 IPR003593 AAA+ ATPase domain MID00_03035 IPR003439 ABC transporter-like MID00_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03040 IPR015168 SsuA/THI5-like MID00_03045 IPR000093 DNA recombination protein RecR MID00_03045 IPR023627 Recombination protein RecR MID00_03045 IPR023628 Recombination protein RecR, C4-type zinc finger MID00_03045 IPR006171 TOPRIM domain MID00_03045 IPR034137 RecR, TOPRIM domain MID00_03050 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily MID00_03050 IPR004401 Nucleoid-associated protein YbaB/EbfC family MID00_03055 IPR021029 DNA polymerase III, tau subunit, domain V MID00_03055 IPR012763 DNA polymerase III, subunit gamma/ tau MID00_03055 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03055 IPR022754 DNA polymerase III, gamma subunit, domain III MID00_03055 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily MID00_03055 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal MID00_03055 IPR001270 ClpA/B family MID00_03055 IPR003593 AAA+ ATPase domain MID00_03055 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV MID00_03065 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03065 IPR014152 DNA helicase subunit AddA MID00_03065 IPR014017 UvrD-like DNA helicase, C-terminal MID00_03065 IPR000212 DNA helicase, UvrD/REP type MID00_03065 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type MID00_03065 IPR011604 Exonuclease, phage-type/RecB, C-terminal MID00_03065 IPR014016 UvrD-like helicase, ATP-binding domain MID00_03065 IPR034739 UvrD/AddA helicase, N-terminal MID00_03065 IPR011335 Restriction endonuclease type II-like MID00_03075 IPR008995 Molybdate/tungstate binding, C-terminal MID00_03075 IPR016462 Molybdate-dependent transcriptional regulator ModE MID00_03075 IPR003725 Molybdenum-binding protein ModE, N-terminal MID00_03075 IPR004606 Molybdenum-pterin binding MID00_03075 IPR005116 Transport-associated OB, type 1 MID00_03075 IPR000847 Transcription regulator HTH, LysR MID00_03075 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03075 IPR036390 Winged helix DNA-binding domain superfamily MID00_03080 IPR005116 Transport-associated OB, type 1 MID00_03080 IPR005666 Sulphate transport system permease protein 1 MID00_03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03080 IPR008995 Molybdate/tungstate binding, C-terminal MID00_03080 IPR017871 ABC transporter, conserved site MID00_03080 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal MID00_03080 IPR003593 AAA+ ATPase domain MID00_03080 IPR003439 ABC transporter-like MID00_03085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_03085 IPR035906 MetI-like superfamily MID00_03085 IPR011867 Molybdate ABC transporter, permease protein MID00_03090 IPR005950 Molybdate ABC transporter, substrate-binding protein MID00_03095 IPR004107 Integrase, SAM-like, N-terminal MID00_03095 IPR011932 Tyrosine recombinase XerD MID00_03095 IPR023009 Tyrosine recombinase XerC/XerD MID00_03095 IPR002104 Integrase, catalytic domain MID00_03095 IPR010998 Integrase/recombinase, N-terminal MID00_03095 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_03095 IPR013762 Integrase-like, catalytic domain superfamily MID00_03100 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC MID00_03100 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily MID00_03100 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain MID00_03105 IPR011701 Major facilitator superfamily MID00_03105 IPR020846 Major facilitator superfamily domain MID00_03105 IPR036259 MFS transporter superfamily MID00_03105 IPR004737 Nitrate transporter MID00_03115 IPR036291 NAD(P)-binding domain superfamily MID00_03115 IPR016040 NAD(P)-binding domain MID00_03120 IPR036390 Winged helix DNA-binding domain superfamily MID00_03120 IPR002577 Helix-turn-helix, HxlR type MID00_03120 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03145 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_03145 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_03145 IPR004682 TRAP transporter solute receptor, DctP family MID00_03155 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_03155 IPR004681 TRAP transporter large membrane protein DctM MID00_03165 IPR013785 Aldolase-type TIM barrel MID00_03165 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA MID00_03165 IPR002220 DapA-like MID00_03165 IPR020625 Schiff base-forming aldolase, active site MID00_03165 IPR020624 Schiff base-forming aldolase, conserved site MID00_03170 IPR015590 Aldehyde dehydrogenase domain MID00_03170 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_03170 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_03170 IPR016161 Aldehyde/histidinol dehydrogenase MID00_03170 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_03170 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_03175 IPR036390 Winged helix DNA-binding domain superfamily MID00_03175 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03175 IPR005119 LysR, substrate-binding MID00_03175 IPR012787 Pca transcription factor PcaQ MID00_03175 IPR000847 Transcription regulator HTH, LysR MID00_03180 IPR012188 NAD(P)-dependent malic enzyme MID00_03180 IPR012302 Malic enzyme, NAD-binding MID00_03180 IPR037062 Malic enzyme, N-terminal domain superfamily MID00_03180 IPR012301 Malic enzyme, N-terminal domain MID00_03180 IPR015884 Malic enzyme, conserved site MID00_03180 IPR036291 NAD(P)-binding domain superfamily MID00_03180 IPR042112 Phosphate acetyltransferase, domain 2 MID00_03180 IPR042113 Phosphate acetyltransferase, domain 1 MID00_03180 IPR002505 Phosphate acetyl/butaryl transferase MID00_03185 IPR005064 Bordetella uptake gene MID00_03185 IPR042100 Bordetella uptake gene, domain 1 MID00_03195 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE MID00_03195 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03200 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain MID00_03200 IPR021731 AMIN domain MID00_03200 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_03205 IPR032816 SNARE associated Golgi protein MID00_03205 IPR032818 DedA family MID00_03210 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_03210 IPR014762 DNA mismatch repair, conserved site MID00_03210 IPR037198 MutL, C-terminal domain superfamily MID00_03210 IPR042121 MutL, C-terminal domain, regulatory subdomain MID00_03210 IPR042120 MutL, C-terminal domain, dimerisation subdomain MID00_03210 IPR014790 MutL, C-terminal, dimerisation MID00_03210 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms MID00_03210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_03210 IPR013507 DNA mismatch repair protein, S5 domain 2-like MID00_03210 IPR002099 DNA mismatch repair protein family, N-terminal MID00_03210 IPR020667 DNA mismatch repair protein, MutL MID00_03210 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_03215 IPR039657 Dimethylallyltransferase MID00_03215 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03215 IPR018022 IPP transferase MID00_03220 IPR012681 Nucleobase cation symporter-1, NCS1 MID00_03220 IPR001248 Purine-cytosine permease MID00_03220 IPR038271 Purine-cytosine permease superfamily MID00_03225 IPR010918 PurM-like, C-terminal domain MID00_03225 IPR036676 PurM-like, C-terminal domain superfamily MID00_03225 IPR016188 PurM-like, N-terminal domain MID00_03225 IPR036921 PurM-like, N-terminal domain superfamily MID00_03225 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase MID00_03230 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03230 IPR001957 Chromosomal replication control, initiator DnaA MID00_03230 IPR020591 Chromosomal replication control, initiator DnaA-like MID00_03230 IPR018312 Chromosomal replication control, initiator DnaA, conserved site MID00_03230 IPR013317 Chromosomal replication initiator protein DnaA MID00_03230 IPR010921 Trp repressor/replication initiator MID00_03230 IPR013159 Chromosomal replication initiator, DnaA C-terminal MID00_03230 IPR003593 AAA+ ATPase domain MID00_03240 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain MID00_03240 IPR025866 Polymerase A arginine-rich C-terminal domain MID00_03240 IPR010206 Poly(A) polymerase I MID00_03240 IPR002646 Poly A polymerase, head domain MID00_03245 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily MID00_03245 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK MID00_03250 IPR005122 Uracil-DNA glycosylase-like MID00_03250 IPR005273 Uracil-DNA glycosylase family 4 MID00_03250 IPR036895 Uracil-DNA glycosylase-like domain superfamily MID00_03265 IPR011701 Major facilitator superfamily MID00_03265 IPR020846 Major facilitator superfamily domain MID00_03265 IPR023495 Sugar efflux transporter, putative MID00_03265 IPR036259 MFS transporter superfamily MID00_03275 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_03275 IPR001647 DNA-binding HTH domain, TetR-type MID00_03275 IPR009057 Homeobox-like domain superfamily MID00_03280 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain MID00_03280 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain MID00_03280 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily MID00_03280 IPR011167 Iron-dependent fumarate hydratase MID00_03280 IPR020557 Fumarate lyase, conserved site MID00_03285 IPR022852 Carnitinyl-CoA dehydratase MID00_03285 IPR014748 Enoyl-CoA hydratase, C-terminal MID00_03285 IPR029045 ClpP/crotonase-like domain superfamily MID00_03285 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_03285 IPR001753 Enoyl-CoA hydratase/isomerase MID00_03295 IPR002310 Glycine-tRNA ligase, alpha subunit MID00_03295 IPR006194 Glycine-tRNA synthetase, heterodimeric MID00_03300 IPR015944 Glycine-tRNA ligase, beta subunit MID00_03300 IPR008909 DALR anticodon binding MID00_03300 IPR006194 Glycine-tRNA synthetase, heterodimeric MID00_03305 IPR006549 HAD-superfamily hydrolase,subfamily IIIA MID00_03305 IPR036412 HAD-like superfamily MID00_03305 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase MID00_03305 IPR023214 HAD superfamily MID00_03305 IPR006543 Histidinol-phosphate phosphatase MID00_03310 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase MID00_03310 IPR002123 Phospholipid/glycerol acyltransferase MID00_03320 IPR004361 Glyoxalase I MID00_03320 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MID00_03320 IPR037523 Vicinal oxygen chelate (VOC) domain MID00_03320 IPR018146 Glyoxalase I, conserved site MID00_03320 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MID00_03325 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain MID00_03330 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm MID00_03330 IPR023165 rRNA adenine dimethylase-like MID00_03330 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site MID00_03330 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal MID00_03330 IPR011530 Ribosomal RNA adenine dimethylase MID00_03330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_03335 IPR027304 Trigger factor/SurA domain superfamily MID00_03335 IPR015391 SurA N-terminal MID00_03335 IPR023034 Peptidyl-prolyl isomerase SurA MID00_03335 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type MID00_03340 IPR020889 LPS-assembly protein LptD MID00_03340 IPR007543 LptD, C-terminal MID00_03345 IPR011009 Protein kinase-like domain superfamily MID00_03345 IPR002575 Aminoglycoside phosphotransferase MID00_03350 IPR005835 Nucleotidyl transferase domain MID00_03350 IPR029044 Nucleotide-diphospho-sugar transferases MID00_03360 IPR003593 AAA+ ATPase domain MID00_03360 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type MID00_03360 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03360 IPR017871 ABC transporter, conserved site MID00_03360 IPR003439 ABC transporter-like MID00_03365 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_03365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_03365 IPR035906 MetI-like superfamily MID00_03370 IPR001320 Ionotropic glutamate receptor MID00_03370 IPR018313 Solute-binding protein family 3, conserved site MID00_03370 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_03375 IPR004872 Lipoprotein NlpA family MID00_03380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_03380 IPR035906 MetI-like superfamily MID00_03385 IPR017871 ABC transporter, conserved site MID00_03385 IPR026253 Methionine import ATP-binding protein MetN MID00_03385 IPR003439 ABC transporter-like MID00_03385 IPR003593 AAA+ ATPase domain MID00_03385 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal MID00_03385 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain MID00_03385 IPR018449 NIL domain MID00_03385 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03400 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_03400 IPR008471 MnmC-like methyltransferase MID00_03400 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC MID00_03400 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal MID00_03400 IPR006076 FAD dependent oxidoreductase MID00_03405 IPR020550 Inositol monophosphatase, conserved site MID00_03405 IPR022337 Inositol monophosphatase, SuhB MID00_03405 IPR000760 Inositol monophosphatase-like MID00_03405 IPR020583 Inositol monophosphatase, metal-binding site MID00_03405 IPR033942 Inositol monophosphatase MID00_03410 IPR000873 AMP-dependent synthetase/ligase MID00_03410 IPR042099 AMP-dependent synthetase-like superfamily MID00_03410 IPR025110 AMP-binding enzyme, C-terminal domain MID00_03410 IPR020845 AMP-binding, conserved site MID00_03415 IPR017439 Amidohydrolase MID00_03415 IPR036264 Bacterial exopeptidase dimerisation domain MID00_03415 IPR002933 Peptidase M20 MID00_03415 IPR011650 Peptidase M20, dimerisation domain MID00_03420 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase MID00_03420 IPR006683 Thioesterase domain MID00_03420 IPR029069 HotDog domain superfamily MID00_03420 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain MID00_03425 IPR000644 CBS domain MID00_03425 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily MID00_03425 IPR006667 SLC41 divalent cation transporters, integral membrane domain MID00_03425 IPR038076 MgtE, N-terminal domain superfamily MID00_03425 IPR006669 Magnesium transporter MgtE MID00_03425 IPR038048 Magnesium transporter MgtE, transmembrane domain MID00_03425 IPR006668 Magnesium transporter, MgtE intracellular domain MID00_03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03435 IPR004027 SEC-C motif MID00_03435 IPR000185 Protein translocase subunit SecA MID00_03435 IPR020937 SecA conserved site MID00_03435 IPR011115 SecA DEAD-like, N-terminal MID00_03435 IPR014018 SecA motor DEAD MID00_03435 IPR011130 SecA, preprotein cross-linking domain MID00_03435 IPR011116 SecA Wing/Scaffold MID00_03435 IPR036266 SecA, Wing/Scaffold superfamily MID00_03435 IPR036670 SecA, preprotein cross-linking domain superfamily MID00_03440 IPR008258 Transglycosylase SLT domain 1 MID00_03440 IPR010090 Phage tail tape measure protein MID00_03440 IPR000189 Prokaryotic transglycosylase, active site MID00_03440 IPR023346 Lysozyme-like domain superfamily MID00_03440 IPR016047 Peptidase M23 MID00_03440 IPR011055 Duplicated hybrid motif MID00_03450 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_03450 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase MID00_03450 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal MID00_03450 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal MID00_03455 IPR024757 Cell division protein FtsZ, C-terminal MID00_03455 IPR000158 Cell division protein FtsZ MID00_03455 IPR020805 Cell division protein FtsZ, conserved site MID00_03455 IPR008280 Tubulin/FtsZ, C-terminal MID00_03455 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain MID00_03455 IPR036525 Tubulin/FtsZ, GTPase domain superfamily MID00_03455 IPR003008 Tubulin/FtsZ, GTPase domain MID00_03460 IPR003494 SHS2 domain inserted in FtsA MID00_03460 IPR020823 Cell division protein FtsA MID00_03465 IPR013685 POTRA domain, FtsQ-type MID00_03465 IPR034746 POTRA domain MID00_03465 IPR005548 Cell division protein FtsQ/DivIB MID00_03465 IPR026579 Cell division protein FtsQ MID00_03470 IPR011761 ATP-grasp fold MID00_03470 IPR013815 ATP-grasp fold, subdomain 1 MID00_03470 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site MID00_03470 IPR005905 D-alanine--D-alanine ligase MID00_03470 IPR011095 D-alanine--D-alanine ligase, C-terminal MID00_03470 IPR011127 D-alanine--D-alanine ligase, N-terminal domain MID00_03470 IPR016185 Pre-ATP-grasp domain superfamily MID00_03475 IPR036565 Mur-like, catalytic domain superfamily MID00_03475 IPR004101 Mur ligase, C-terminal MID00_03475 IPR036615 Mur ligase, C-terminal domain superfamily MID00_03475 IPR013221 Mur ligase, central MID00_03475 IPR000713 Mur ligase, N-terminal catalytic domain MID00_03475 IPR005758 UDP-N-acetylmuramate--L-alanine ligase MID00_03480 IPR004276 Glycosyltransferase family 28, N-terminal domain MID00_03480 IPR006009 N-acetylglucosaminyltransferase, MurG MID00_03480 IPR007235 Glycosyl transferase, family 28, C-terminal MID00_03485 IPR013437 Probable peptidoglycan glycosyltransferase FtsW MID00_03485 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA MID00_03490 IPR018109 Folylpolyglutamate synthetase, conserved site MID00_03490 IPR036565 Mur-like, catalytic domain superfamily MID00_03490 IPR004101 Mur ligase, C-terminal MID00_03490 IPR036615 Mur ligase, C-terminal domain superfamily MID00_03490 IPR013221 Mur ligase, central MID00_03490 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase MID00_03495 IPR000715 Glycosyl transferase, family 4 MID00_03495 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase MID00_03495 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site MID00_03500 IPR013221 Mur ligase, central MID00_03500 IPR004101 Mur ligase, C-terminal MID00_03500 IPR036615 Mur ligase, C-terminal domain superfamily MID00_03500 IPR036565 Mur-like, catalytic domain superfamily MID00_03500 IPR000713 Mur ligase, N-terminal catalytic domain MID00_03500 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase MID00_03500 IPR035911 MurE/MurF, N-terminal MID00_03505 IPR012338 Beta-lactamase/transpeptidase-like MID00_03505 IPR037532 Peptidoglycan D,D-transpeptidase FtsI MID00_03505 IPR005311 Penicillin-binding protein, dimerisation domain MID00_03505 IPR036138 Penicillin-binding protein, dimerisation domain superfamily MID00_03505 IPR001460 Penicillin-binding protein, transpeptidase MID00_03510 IPR011922 Cell division protein FtsL MID00_03515 IPR002903 Ribosomal RNA small subunit methyltransferase H MID00_03515 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily MID00_03515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_03520 IPR020603 MraZ domain MID00_03520 IPR007159 SpoVT-AbrB domain MID00_03520 IPR038619 MraZ superfamily MID00_03520 IPR037914 SpoVT-AbrB domain superfamily MID00_03520 IPR035644 MraZ, C-terminal MID00_03520 IPR003444 Transcriptional regulator MraZ MID00_03520 IPR035642 MraZ, N-terminal MID00_03530 IPR032781 ABC-transporter extension domain MID00_03530 IPR032524 ABC transporter Uup, C-terminal MID00_03530 IPR003593 AAA+ ATPase domain MID00_03530 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily MID00_03530 IPR017871 ABC transporter, conserved site MID00_03530 IPR003439 ABC transporter-like MID00_03530 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03535 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_03535 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_03535 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_03535 IPR012675 Beta-grasp domain superfamily MID00_03540 IPR033909 Ribonucleotide reductase small subunit MID00_03540 IPR030475 Ribonucleotide reductase small subunit, acitve site MID00_03540 IPR000358 Ribonucleotide reductase small subunit family MID00_03540 IPR009078 Ferritin-like superfamily MID00_03540 IPR012348 Ribonucleotide reductase-like MID00_03545 IPR005144 ATP-cone domain MID00_03545 IPR013346 Ribonucleotide reductase, class I , alpha subunit MID00_03545 IPR000788 Ribonucleotide reductase large subunit, C-terminal MID00_03545 IPR013509 Ribonucleotide reductase large subunit, N-terminal MID00_03545 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal MID00_03545 IPR039718 Ribonucleoside-diphosphate reductase large subunit MID00_03550 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain MID00_03550 IPR018982 RQC domain MID00_03550 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03550 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03550 IPR010997 HRDC-like superfamily MID00_03550 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial MID00_03550 IPR004589 DNA helicase, ATP-dependent, RecQ type MID00_03550 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_03550 IPR002121 HRDC domain MID00_03550 IPR001650 Helicase, C-terminal MID00_03550 IPR011545 DEAD/DEAH box helicase domain MID00_03560 IPR023790 Chloride channel, voltage-gated, ClcB MID00_03560 IPR014743 Chloride channel, core MID00_03560 IPR001807 Chloride channel, voltage gated MID00_03565 IPR003317 Cytochrome ubiquinol oxidase subunit 2 MID00_03570 IPR002585 Cytochrome ubiquinol oxidase subunit 1 MID00_03575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_03575 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily MID00_03575 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal MID00_03575 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain MID00_03575 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain MID00_03575 IPR000924 Glutamyl/glutaminyl-tRNA synthetase MID00_03575 IPR004514 Glutamine-tRNA synthetase MID00_03575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_03575 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily MID00_03575 IPR022861 Glutamine-tRNA ligase, bacterial MID00_03580 IPR005526 Septum formation inhibitor MinC, C-terminal MID00_03580 IPR007874 Septum formation inhibitor MinC, N-terminal MID00_03580 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal MID00_03580 IPR013033 Septum formation inhibitor MinC MID00_03580 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily MID00_03580 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily MID00_03585 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain MID00_03585 IPR010223 ATP binding protein MinD, bacterial-type MID00_03585 IPR025501 ATP binding protein MinD MID00_03585 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03590 IPR005527 Cell division topological specificity factor MinE MID00_03590 IPR036707 Cell division topological specificity factor MinE superfamily MID00_03610 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03610 IPR017871 ABC transporter, conserved site MID00_03610 IPR003439 ABC transporter-like MID00_03610 IPR032781 ABC-transporter extension domain MID00_03610 IPR003593 AAA+ ATPase domain MID00_03610 IPR022374 Energy-dependent translational throttle protein EttA MID00_03620 IPR001173 Glycosyltransferase 2-like MID00_03620 IPR029044 Nucleotide-diphospho-sugar transferases MID00_03625 IPR003593 AAA+ ATPase domain MID00_03625 IPR003439 ABC transporter-like MID00_03625 IPR041552 UvrA DNA-binding domain MID00_03625 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03625 IPR004602 UvrABC system subunit A MID00_03625 IPR041102 UvrA, interaction domain MID00_03625 IPR017871 ABC transporter, conserved site MID00_03630 IPR005801 ADC synthase MID00_03630 IPR019999 Anthranilate synthase component I-like MID00_03630 IPR006805 Anthranilate synthase component I, N-terminal MID00_03630 IPR015890 Chorismate-utilising enzyme, C-terminal MID00_03630 IPR005802 Aminodeoxychorismate synthase, component I MID00_03640 IPR000594 THIF-type NAD/FAD binding fold MID00_03640 IPR035985 Ubiquitin-activating enzyme MID00_03650 IPR012349 FMN-binding split barrel MID00_03650 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site MID00_03650 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative MID00_03650 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal MID00_03650 IPR000659 Pyridoxamine 5'-phosphate oxidase MID00_03655 IPR002563 Flavin reductase like domain MID00_03655 IPR012349 FMN-binding split barrel MID00_03655 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03655 IPR036390 Winged helix DNA-binding domain superfamily MID00_03660 IPR006076 FAD dependent oxidoreductase MID00_03660 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_03660 IPR030862 L-2-hydroxyglutarate dehydrogenase MID00_03665 IPR004810 Formyltetrahydrofolate deformylase MID00_03665 IPR002912 ACT domain MID00_03665 IPR002376 Formyl transferase, N-terminal MID00_03665 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain MID00_03665 IPR036477 Formyl transferase, N-terminal domain superfamily MID00_03670 IPR000101 Gamma-glutamyltranspeptidase MID00_03670 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_03675 IPR036390 Winged helix DNA-binding domain superfamily MID00_03675 IPR005119 LysR, substrate-binding MID00_03675 IPR000847 Transcription regulator HTH, LysR MID00_03675 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 MID00_03675 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03680 IPR006089 Acyl-CoA dehydrogenase, conserved site MID00_03680 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_03680 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_03680 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_03680 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_03680 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_03680 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_03685 IPR002539 MaoC-like dehydratase domain MID00_03685 IPR029069 HotDog domain superfamily MID00_03685 IPR011966 Phenylacetic acid degradation protein PaaN MID00_03685 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_03685 IPR015590 Aldehyde dehydrogenase domain MID00_03685 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_03685 IPR016161 Aldehyde/histidinol dehydrogenase MID00_03690 IPR000073 Alpha/beta hydrolase fold-1 MID00_03690 IPR000639 Epoxide hydrolase-like MID00_03690 IPR029058 Alpha/Beta hydrolase fold MID00_03695 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily MID00_03695 IPR005145 Putative GTP-binding controlling metal-binding domain MID00_03695 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily MID00_03695 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 MID00_03695 IPR006070 YrdC-like domain MID00_03700 IPR011054 Rudiment single hybrid motif MID00_03700 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain MID00_03700 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type MID00_03700 IPR016185 Pre-ATP-grasp domain superfamily MID00_03700 IPR013815 ATP-grasp fold, subdomain 1 MID00_03700 IPR011761 ATP-grasp fold MID00_03700 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit MID00_03705 IPR035893 PurE domain superfamily MID00_03705 IPR000031 PurE domain MID00_03705 IPR024694 PurE, prokaryotic type MID00_03705 IPR033747 Class I PurE MID00_03710 IPR028923 SAICAR synthetase/ADE2, N-terminal MID00_03710 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase MID00_03710 IPR018236 SAICAR synthetase, conserved site MID00_03715 IPR013785 Aldolase-type TIM barrel MID00_03715 IPR000771 Fructose-bisphosphate aldolase, class-II MID00_03715 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype MID00_03720 IPR036425 MoaB/Mog-like domain superfamily MID00_03720 IPR001453 MoaB/Mog domain MID00_03720 IPR008284 Molybdenum cofactor biosynthesis, conserved site MID00_03725 IPR036291 NAD(P)-binding domain superfamily MID00_03725 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_03725 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_03730 IPR016161 Aldehyde/histidinol dehydrogenase MID00_03730 IPR015590 Aldehyde dehydrogenase domain MID00_03730 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_03730 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_03730 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_03740 IPR036043 Phosphoglycerate kinase superfamily MID00_03740 IPR015824 Phosphoglycerate kinase, N-terminal MID00_03740 IPR015911 Phosphoglycerate kinase, conserved site MID00_03740 IPR001576 Phosphoglycerate kinase MID00_03745 IPR036291 NAD(P)-binding domain superfamily MID00_03745 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I MID00_03745 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain MID00_03745 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain MID00_03745 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site MID00_03745 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family MID00_03750 IPR029061 Thiamin diphosphate-binding fold MID00_03750 IPR005475 Transketolase-like, pyrimidine-binding domain MID00_03750 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II MID00_03750 IPR005478 Transketolase, bacterial-like MID00_03750 IPR020826 Transketolase binding site MID00_03750 IPR033248 Transketolase, C-terminal domain MID00_03750 IPR033247 Transketolase family MID00_03750 IPR005474 Transketolase, N-terminal MID00_03755 IPR029028 Alpha/beta knot methyltransferases MID00_03755 IPR006700 Ribosomal RNA small subunit methyltransferase E MID00_03755 IPR015947 PUA-like superfamily MID00_03755 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MID00_03760 IPR035905 Barstar-like superfamily MID00_03760 IPR000468 Barstar (barnase inhibitor) MID00_03770 IPR002505 Phosphate acetyl/butaryl transferase MID00_03770 IPR042113 Phosphate acetyltransferase, domain 1 MID00_03770 IPR036291 NAD(P)-binding domain superfamily MID00_03770 IPR012188 NAD(P)-dependent malic enzyme MID00_03770 IPR012302 Malic enzyme, NAD-binding MID00_03770 IPR037062 Malic enzyme, N-terminal domain superfamily MID00_03770 IPR012301 Malic enzyme, N-terminal domain MID00_03770 IPR015884 Malic enzyme, conserved site MID00_03770 IPR042112 Phosphate acetyltransferase, domain 2 MID00_03780 IPR015424 Pyridoxal phosphate-dependent transferase MID00_03780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_03780 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site MID00_03780 IPR004839 Aminotransferase, class I/classII MID00_03785 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A MID00_03785 IPR023346 Lysozyme-like domain superfamily MID00_03785 IPR000189 Prokaryotic transglycosylase, active site MID00_03785 IPR008258 Transglycosylase SLT domain 1 MID00_03790 IPR023677 UbiD decarboxylyase, bacteria MID00_03790 IPR002830 UbiD decarboxylyase family MID00_03795 IPR004361 Glyoxalase I MID00_03795 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MID00_03795 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MID00_03795 IPR037523 Vicinal oxygen chelate (VOC) domain MID00_03795 IPR018146 Glyoxalase I, conserved site MID00_03800 IPR036390 Winged helix DNA-binding domain superfamily MID00_03800 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03800 IPR005119 LysR, substrate-binding MID00_03800 IPR000847 Transcription regulator HTH, LysR MID00_03805 IPR004736 MFS transporter, metabolite:H symporter MID00_03805 IPR015041 Osmosensory transporter coiled coil MID00_03805 IPR036259 MFS transporter superfamily MID00_03805 IPR036292 Proline/betaine transporter ProP, C-terminal MID00_03805 IPR005829 Sugar transporter, conserved site MID00_03805 IPR020846 Major facilitator superfamily domain MID00_03805 IPR005828 Major facilitator, sugar transporter-like MID00_03815 IPR023631 Amidase signature domain MID00_03815 IPR000120 Amidase MID00_03815 IPR020556 Amidase, conserved site MID00_03815 IPR036928 Amidase signature (AS) superfamily MID00_03815 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit MID00_03830 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase MID00_03830 IPR036291 NAD(P)-binding domain superfamily MID00_03835 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_03835 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_03835 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_03835 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_03835 IPR000951 Phthalate dioxygenase reductase MID00_03835 IPR017938 Riboflavin synthase-like beta-barrel MID00_03835 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_03835 IPR012675 Beta-grasp domain superfamily MID00_03835 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_03845 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_03845 IPR036390 Winged helix DNA-binding domain superfamily MID00_03845 IPR000847 Transcription regulator HTH, LysR MID00_03845 IPR011781 D-serine deaminase transcriptional activator MID00_03845 IPR005119 LysR, substrate-binding MID00_03860 IPR010279 Inner membrane protein YqjD/ElaB MID00_03870 IPR005765 Uracil phosphoribosyl transferase MID00_03870 IPR000836 Phosphoribosyltransferase domain MID00_03870 IPR034332 Uracil phosphoribosyltransferase, bacterial-type MID00_03870 IPR029057 Phosphoribosyltransferase-like MID00_03875 IPR012338 Beta-lactamase/transpeptidase-like MID00_03875 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C MID00_03880 IPR042119 QueA, domain 2 MID00_03880 IPR042118 QueA, domain 1 MID00_03880 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily MID00_03880 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA MID00_03885 IPR004803 tRNA-guanine transglycosylase MID00_03885 IPR036511 Queuine tRNA-ribosyltransferase-like MID00_03885 IPR002616 tRNA-guanine(15) transglycosylase-like MID00_03890 IPR003849 Preprotein translocase YajC MID00_03895 IPR005791 Protein translocase subunit SecD MID00_03895 IPR027398 SecD export protein N-terminal TM domain MID00_03895 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial MID00_03895 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MID00_03895 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site MID00_03900 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site MID00_03900 IPR005665 Protein-export membrane protein SecF, bacterial MID00_03900 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial MID00_03900 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MID00_03905 IPR036005 Creatinase/aminopeptidase-like MID00_03905 IPR000994 Peptidase M24 MID00_03905 IPR001714 Peptidase M24, methionine aminopeptidase MID00_03905 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 MID00_03915 IPR006638 Elp3/MiaB/NifB MID00_03915 IPR005839 Methylthiotransferase MID00_03915 IPR020612 Methylthiotransferase, conserved site MID00_03915 IPR013848 Methylthiotransferase, N-terminal MID00_03915 IPR038135 Methylthiotransferase, N-terminal domain superfamily MID00_03915 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB MID00_03915 IPR007197 Radical SAM MID00_03915 IPR023404 Radical SAM, alpha/beta horseshoe MID00_03915 IPR002792 TRAM domain MID00_03920 IPR003714 PhoH-like protein MID00_03920 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_03925 IPR023091 Metalloprotease catalytic domain superfamily, predicted MID00_03925 IPR002036 Endoribonuclease YbeY MID00_03925 IPR020549 Endoribonuclease YbeY, conserved site MID00_03930 IPR000644 CBS domain MID00_03930 IPR036318 FAD-binding, type PCMH-like superfamily MID00_03930 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_03930 IPR005170 Transporter-associated domain MID00_03935 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_03935 IPR003010 Carbon-nitrogen hydrolase MID00_03935 IPR004563 Apolipoprotein N-acyltransferase MID00_03940 IPR001633 EAL domain MID00_03940 IPR035919 EAL domain superfamily MID00_03940 IPR000160 GGDEF domain MID00_03940 IPR005330 MHYT domain MID00_03940 IPR029787 Nucleotide cyclase MID00_03975 IPR036259 MFS transporter superfamily MID00_03975 IPR020846 Major facilitator superfamily domain MID00_03975 IPR011701 Major facilitator superfamily MID00_03985 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_03985 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG MID00_03990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_03990 IPR001036 Acriflavin resistance protein MID00_03990 IPR022831 Multidrug resistance protein MdtB MID00_04000 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site MID00_04000 IPR029069 HotDog domain superfamily MID00_04005 IPR013785 Aldolase-type TIM barrel MID00_04005 IPR010722 Biotin and thiamin synthesis-associated domain MID00_04005 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB MID00_04005 IPR024177 Biotin synthase MID00_04005 IPR006638 Elp3/MiaB/NifB MID00_04005 IPR007197 Radical SAM MID00_04025 IPR013740 Redoxin MID00_04025 IPR013766 Thioredoxin domain MID00_04025 IPR036249 Thioredoxin-like superfamily MID00_04025 IPR037944 Peroxiredoxin-5-like MID00_04030 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_04030 IPR004681 TRAP transporter large membrane protein DctM MID00_04035 IPR007387 TRAP transporter, small membrane protein DctQ MID00_04040 IPR004682 TRAP transporter solute receptor, DctP family MID00_04040 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_04040 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_04045 IPR003594 Histidine kinase/HSP90-like ATPase MID00_04045 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_04045 IPR005467 Histidine kinase domain MID00_04045 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_04045 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_04045 IPR001610 PAC motif MID00_04045 IPR000014 PAS domain MID00_04045 IPR000700 PAS-associated, C-terminal MID00_04045 IPR035965 PAS domain superfamily MID00_04045 IPR013767 PAS fold MID00_04045 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_04050 IPR011006 CheY-like superfamily MID00_04050 IPR001789 Signal transduction response regulator, receiver domain MID00_04050 IPR000792 Transcription regulator LuxR, C-terminal MID00_04050 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04055 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain MID00_04055 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily MID00_04055 IPR023045 Molybdenum cofactor biosynthesis C MID00_04065 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily MID00_04065 IPR003448 Molybdopterin biosynthesis MoaE MID00_04070 IPR012245 Molybdenum cofactor biosynthesis protein MoaB MID00_04070 IPR036425 MoaB/Mog-like domain superfamily MID00_04070 IPR001453 MoaB/Mog domain MID00_04070 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria MID00_04070 IPR008284 Molybdenum cofactor biosynthesis, conserved site MID00_04075 IPR036135 MoeA, N-terminal and linker domain superfamily MID00_04075 IPR005110 MoeA, N-terminal and linker domain MID00_04075 IPR005111 MoeA, C-terminal, domain IV MID00_04075 IPR038987 Molybdopterin biosynthesis protein MoeA-like MID00_04075 IPR036688 MoeA, C-terminal, domain IV superfamily MID00_04075 IPR001453 MoaB/Mog domain MID00_04075 IPR036425 MoaB/Mog-like domain superfamily MID00_04075 IPR008284 Molybdenum cofactor biosynthesis, conserved site MID00_04085 IPR025877 MobA-like NTP transferase MID00_04085 IPR013482 Molybdenum cofactor guanylyltransferase MID00_04085 IPR029044 Nucleotide-diphospho-sugar transferases MID00_04090 IPR007197 Radical SAM MID00_04090 IPR010505 Molybdenum cofactor synthesis C-terminal MID00_04090 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site MID00_04090 IPR006638 Elp3/MiaB/NifB MID00_04090 IPR013785 Aldolase-type TIM barrel MID00_04090 IPR013483 Molybdenum cofactor biosynthesis protein A MID00_04095 IPR024370 PBP domain MID00_04095 IPR009061 Putative DNA-binding domain superfamily MID00_04095 IPR041657 Helix-turn-helix domain, group 17 MID00_04095 IPR010093 SinI-like, DNA-binding domain MID00_04105 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain MID00_04105 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily MID00_04105 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily MID00_04105 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain MID00_04105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_04105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_04105 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site MID00_04110 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding MID00_04110 IPR006478 Formate dehydrogenase, alpha subunit MID00_04110 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain MID00_04110 IPR006657 Molybdopterin dinucleotide-binding domain MID00_04110 IPR041924 Formate dehydrogenase H, N-terminal MID00_04110 IPR006656 Molybdopterin oxidoreductase MID00_04110 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_04110 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_04110 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_04110 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_04110 IPR009010 Aspartate decarboxylase-like domain superfamily MID00_04115 IPR016193 Cytidine deaminase-like MID00_04115 IPR003786 Sulfur carrier protein FdhD MID00_04125 IPR006015 Universal stress protein A family MID00_04125 IPR006016 UspA MID00_04135 IPR016181 Acyl-CoA N-acyltransferase MID00_04135 IPR000182 GNAT domain MID00_04155 IPR001173 Glycosyltransferase 2-like MID00_04155 IPR029044 Nucleotide-diphospho-sugar transferases MID00_04160 IPR001486 Truncated hemoglobin MID00_04160 IPR009050 Globin-like superfamily MID00_04160 IPR012292 Globin/Protoglobin MID00_04165 IPR030489 Transcription regulator Rrf2-type, conserved site MID00_04165 IPR000944 Transcription regulator Rrf2-type MID00_04165 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04165 IPR036390 Winged helix DNA-binding domain superfamily MID00_04170 IPR036291 NAD(P)-binding domain superfamily MID00_04170 IPR002912 ACT domain MID00_04170 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MID00_04170 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site MID00_04170 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 MID00_04170 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain MID00_04175 IPR004852 Di-haem cytochrome c peroxidase MID00_04175 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase MID00_04175 IPR009056 Cytochrome c-like domain MID00_04175 IPR036909 Cytochrome c-like domain superfamily MID00_04180 IPR003593 AAA+ ATPase domain MID00_04180 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_04180 IPR003439 ABC transporter-like MID00_04180 IPR017871 ABC transporter, conserved site MID00_04180 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04185 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04185 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_04185 IPR017871 ABC transporter, conserved site MID00_04185 IPR003439 ABC transporter-like MID00_04185 IPR003593 AAA+ ATPase domain MID00_04190 IPR001851 ABC transporter, permease MID00_04190 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal MID00_04195 IPR001851 ABC transporter, permease MID00_04215 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding MID00_04215 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain MID00_04215 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain MID00_04215 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily MID00_04215 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04215 IPR035451 Ada-like domain superfamily MID00_04215 IPR018060 DNA binding HTH domain, AraC-type MID00_04215 IPR009057 Homeobox-like domain superfamily MID00_04215 IPR016221 Bifunctional regulatory protein Ada MID00_04215 IPR004026 Ada DNA repair, metal-binding MID00_04215 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site MID00_04215 IPR018062 HTH domain AraC-type, conserved site MID00_04220 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_04220 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_04220 IPR036291 NAD(P)-binding domain superfamily MID00_04225 IPR003834 Cytochrome C biogenesis protein, transmembrane domain MID00_04230 IPR013026 Tetratricopeptide repeat-containing domain MID00_04230 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_04230 IPR019734 Tetratricopeptide repeat MID00_04230 IPR017560 Cytochrome c-type biogenesis protein CcmI MID00_04235 IPR005616 CcmH/CycL/Ccl2/NrfF family MID00_04235 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily MID00_04240 IPR036249 Thioredoxin-like superfamily MID00_04240 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE MID00_04240 IPR017937 Thioredoxin, conserved site MID00_04240 IPR013740 Redoxin MID00_04240 IPR013766 Thioredoxin domain MID00_04245 IPR002541 Cytochrome c assembly protein MID00_04245 IPR003567 Cytochrome c-type biogenesis protein MID00_04245 IPR003568 Cytochrome c-type biogenesis protein CcmF MID00_04245 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal MID00_04250 IPR004329 CcmE/CycJ protein MID00_04250 IPR036127 CcmE-like superfamily MID00_04260 IPR003557 Cytochrome c-type biogenesis protein CcmC MID00_04260 IPR002541 Cytochrome c assembly protein MID00_04265 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria MID00_04265 IPR003544 Cytochrome c-type biogenesis protein CcmB MID00_04270 IPR005895 ABC transporter, haem export, CcmA MID00_04270 IPR017871 ABC transporter, conserved site MID00_04270 IPR003439 ABC transporter-like MID00_04270 IPR003593 AAA+ ATPase domain MID00_04270 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04280 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain MID00_04280 IPR036390 Winged helix DNA-binding domain superfamily MID00_04280 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04280 IPR005119 LysR, substrate-binding MID00_04280 IPR000847 Transcription regulator HTH, LysR MID00_04285 IPR036874 Carbonic anhydrase superfamily MID00_04285 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site MID00_04285 IPR001765 Carbonic anhydrase MID00_04290 IPR036709 Autotransporter beta-domain superfamily MID00_04290 IPR036514 SGNH hydrolase superfamily MID00_04290 IPR006315 Outer membrane autotransporter barrel MID00_04290 IPR008265 Lipase, GDSL, active site MID00_04290 IPR017186 Lipase, autotransporter EstA MID00_04290 IPR001087 GDSL lipase/esterase MID00_04290 IPR005546 Autotransporter beta-domain MID00_04300 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04300 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily MID00_04300 IPR003439 ABC transporter-like MID00_04300 IPR032524 ABC transporter Uup, C-terminal MID00_04300 IPR003593 AAA+ ATPase domain MID00_04300 IPR017871 ABC transporter, conserved site MID00_04300 IPR032781 ABC-transporter extension domain MID00_04305 IPR002934 Polymerase, nucleotidyl transferase domain MID00_04305 IPR025184 Domain of unknown function DUF4111 MID00_04305 IPR024172 Streptomycin 3''-adenylyltransferase MID00_04310 IPR024172 Streptomycin 3''-adenylyltransferase MID00_04310 IPR002934 Polymerase, nucleotidyl transferase domain MID00_04310 IPR025184 Domain of unknown function DUF4111 MID00_04330 IPR031167 OBG-type guanine nucleotide-binding (G) domain MID00_04330 IPR006073 GTP binding domain MID00_04330 IPR013029 YchF, C-terminal domain MID00_04330 IPR041706 YchF, N-terminal MID00_04330 IPR012676 TGS-like MID00_04330 IPR004095 TGS MID00_04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04330 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 MID00_04330 IPR012675 Beta-grasp domain superfamily MID00_04330 IPR023192 TGS-like domain superfamily MID00_04340 IPR001328 Peptidyl-tRNA hydrolase MID00_04340 IPR018171 Peptidyl-tRNA hydrolase, conserved site MID00_04340 IPR036416 Peptidyl-tRNA hydrolase superfamily MID00_04345 IPR020055 Ribosomal protein L25, short-form MID00_04345 IPR029751 Ribosomal protein L25 MID00_04345 IPR020057 Ribosomal protein L25, beta domain MID00_04345 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily MID00_04345 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal MID00_04345 IPR001021 Ribosomal protein L25, long-form MID00_04345 IPR037121 Ribosomal protein L25, C-terminal MID00_04350 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type MID00_04350 IPR005946 Ribose-phosphate pyrophosphokinase MID00_04350 IPR029057 Phosphoribosyltransferase-like MID00_04350 IPR000836 Phosphoribosyltransferase domain MID00_04350 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site MID00_04350 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain MID00_04360 IPR013750 GHMP kinase, C-terminal domain MID00_04360 IPR036554 GHMP kinase, C-terminal domain superfamily MID00_04360 IPR006204 GHMP kinase N-terminal domain MID00_04360 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase MID00_04360 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_04360 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_04365 IPR029046 Lipoprotein localisation LolA/LolB/LppX MID00_04365 IPR004565 Outer membrane lipoprotein LolB MID00_04375 IPR010663 Zinc finger, FPG/IleRS-type MID00_04375 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type MID00_04375 IPR010979 Ribosomal protein S13-like, H2TH MID00_04375 IPR035937 MutM-like, N-terminal MID00_04375 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain MID00_04375 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding MID00_04375 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site MID00_04375 IPR020629 Formamidopyrimidine-DNA glycosylase MID00_04385 IPR002938 FAD-binding domain MID00_04385 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_04395 IPR022950 Homogentisate 1,2-dioxygenase, bacterial MID00_04395 IPR011051 RmlC-like cupin domain superfamily MID00_04395 IPR005708 Homogentisate 1,2-dioxygenase MID00_04395 IPR014710 RmlC-like jelly roll fold MID00_04400 IPR011234 Fumarylacetoacetase-like, C-terminal MID00_04400 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily MID00_04410 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 MID00_04410 IPR016166 FAD-binding domain, PCMH-type MID00_04410 IPR036318 FAD-binding, type PCMH-like superfamily MID00_04410 IPR016164 FAD-linked oxidase-like, C-terminal MID00_04410 IPR004113 FAD-linked oxidase, C-terminal MID00_04410 IPR004490 Glycolate oxidase subunit GlcD MID00_04410 IPR006094 FAD linked oxidase, N-terminal MID00_04415 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I MID00_04415 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III MID00_04415 IPR005843 Alpha-D-phosphohexomutase, C-terminal MID00_04415 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily MID00_04415 IPR016066 Alpha-D-phosphohexomutase, conserved site MID00_04415 IPR005841 Alpha-D-phosphohexomutase superfamily MID00_04415 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III MID00_04415 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II MID00_04420 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MID00_04420 IPR001296 Glycosyl transferase, family 1 MID00_04425 IPR001296 Glycosyl transferase, family 1 MID00_04425 IPR031358 Stealth protein CR1, conserved region 1 MID00_04425 IPR031356 Stealth protein CR4, conserved region 4 MID00_04425 IPR031357 Stealth protein CR3, conserved region 3 MID00_04425 IPR021520 Stealth protein CR2, conserved region 2 MID00_04430 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MID00_04430 IPR001296 Glycosyl transferase, family 1 MID00_04440 IPR036291 NAD(P)-binding domain superfamily MID00_04440 IPR001509 NAD-dependent epimerase/dehydratase MID00_04445 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal MID00_04445 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal MID00_04445 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase MID00_04445 IPR036291 NAD(P)-binding domain superfamily MID00_04445 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily MID00_04445 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_04445 IPR017476 UDP-glucose/GDP-mannose dehydrogenase MID00_04445 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation MID00_04450 IPR000715 Glycosyl transferase, family 4 MID00_04455 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04455 IPR037416 Nodulation protein D, PBP2 MID00_04455 IPR036390 Winged helix DNA-binding domain superfamily MID00_04455 IPR000847 Transcription regulator HTH, LysR MID00_04455 IPR005119 LysR, substrate-binding MID00_04460 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 MID00_04460 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase MID00_04460 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily MID00_04460 IPR002042 Uricase MID00_04460 IPR019842 Uricase, conserved site MID00_04465 IPR011051 RmlC-like cupin domain superfamily MID00_04465 IPR007247 Ureidoglycolate lyase MID00_04465 IPR023525 Ureidoglycolate lyase, bacterial MID00_04465 IPR024060 Ureidoglycolate lyase domain superfamily MID00_04470 IPR001303 Class II aldolase/adducin N-terminal MID00_04470 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MID00_04475 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type MID00_04475 IPR004370 4-oxalocrotonate tautomerase MID00_04475 IPR014347 Tautomerase/MIF superfamily MID00_04480 IPR006042 Xanthine/uracil permease MID00_04480 IPR017588 Uric acid permease UacT-like MID00_04480 IPR006043 Xanthine/uracil/vitamin C permease MID00_04490 IPR036390 Winged helix DNA-binding domain superfamily MID00_04490 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04490 IPR000847 Transcription regulator HTH, LysR MID00_04490 IPR005119 LysR, substrate-binding MID00_04495 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding MID00_04495 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain MID00_04495 IPR012000 Thiamine pyrophosphate enzyme, central domain MID00_04495 IPR029061 Thiamin diphosphate-binding fold MID00_04495 IPR006397 Glyoxylate carboligase MID00_04495 IPR029035 DHS-like NAD/FAD-binding domain superfamily MID00_04500 IPR013022 Xylose isomerase-like, TIM barrel domain MID00_04500 IPR036237 Xylose isomerase-like superfamily MID00_04500 IPR017643 Hydroxypyruvate isomerase MID00_04500 IPR026040 Hydroxypyruvate isomerase-like MID00_04505 IPR006398 2-hydroxy-3-oxopropionate reductase MID00_04505 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain MID00_04505 IPR036291 NAD(P)-binding domain superfamily MID00_04505 IPR015815 3-hydroxyisobutyrate dehydrogenase-related MID00_04505 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding MID00_04505 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site MID00_04505 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_04505 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_04510 IPR038614 Glycerate kinase, N-terminal domain superfamily MID00_04510 IPR039760 MOFRL domain-containing protein MID00_04510 IPR025286 MOFRL-associated domain MID00_04510 IPR007835 MOFRL domain MID00_04510 IPR037035 Glycerate kinase-like, C-terminal domain superfamily MID00_04515 IPR005624 Haem-degrading MID00_04515 IPR038084 GlcG-like domain superfamily MID00_04520 IPR036918 Pyruvate kinase, C-terminal domain superfamily MID00_04520 IPR015795 Pyruvate kinase, C-terminal MID00_04520 IPR015793 Pyruvate kinase, barrel MID00_04520 IPR018209 Pyruvate kinase, active site MID00_04520 IPR040442 Pyruvate kinase-like domain superfamily MID00_04520 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_04520 IPR001697 Pyruvate kinase MID00_04520 IPR015806 Pyruvate kinase, insert domain superfamily MID00_04520 IPR011037 Pyruvate kinase-like, insert domain superfamily MID00_04525 IPR011566 Ubiquinone biosynthesis protein Coq7 MID00_04525 IPR009078 Ferritin-like superfamily MID00_04550 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site MID00_04550 IPR004677 Cytochrome c oxidase cbb3-type, subunit I MID00_04550 IPR036927 Cytochrome c oxidase-like, subunit I superfamily MID00_04550 IPR023616 Cytochrome c oxidase-like, subunit I domain MID00_04550 IPR000883 Cytochrome c oxidase subunit I MID00_04555 IPR036102 OsmC/Ohr superfamily MID00_04555 IPR003718 OsmC/Ohr family MID00_04555 IPR015946 K homology domain-like, alpha/beta MID00_04560 IPR000398 Thymidylate synthase MID00_04560 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily MID00_04560 IPR020940 Thymidylate synthase, active site MID00_04560 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain MID00_04565 IPR017925 Dihydrofolate reductase conserved site MID00_04565 IPR001796 Dihydrofolate reductase domain MID00_04565 IPR012259 Dihydrofolate reductase MID00_04565 IPR024072 Dihydrofolate reductase-like domain superfamily MID00_04570 IPR011053 Single hybrid motif MID00_04570 IPR002930 Glycine cleavage system H-protein MID00_04570 IPR033753 Glycine cleavage system H-protein/Simiate MID00_04570 IPR000089 Biotin/lipoyl attachment MID00_04570 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site MID00_04570 IPR017453 Glycine cleavage system H-protein, subgroup MID00_04575 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like MID00_04575 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_04575 IPR023166 HI0933-like insert domain superfamily MID00_04580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_04580 IPR015424 Pyridoxal phosphate-dependent transferase MID00_04580 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily MID00_04580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_04580 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal MID00_04580 IPR000310 Orn/Lys/Arg decarboxylase, major domain MID00_04580 IPR011193 Ornithine/lysine/arginine decarboxylase MID00_04580 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal MID00_04585 IPR029054 dUTPase-like MID00_04585 IPR011962 dCTP deaminase MID00_04585 IPR036157 dUTPase-like superfamily MID00_04585 IPR033704 dUTPase, trimeric MID00_04600 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 MID00_04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04600 IPR000808 Mrp, conserved site MID00_04600 IPR019591 Mrp/NBP35 ATP-binding protein MID00_04610 IPR014758 Methionyl-tRNA synthetase MID00_04610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_04610 IPR012340 Nucleic acid-binding, OB-fold MID00_04610 IPR002547 tRNA-binding domain MID00_04610 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding MID00_04610 IPR029038 Methionyl-tRNA synthetase, Zn-domain MID00_04610 IPR015413 Methionyl/Leucyl tRNA synthetase MID00_04610 IPR023458 Methionine-tRNA ligase, type 1 MID00_04610 IPR033911 Methioninyl-tRNA synthetase core domain MID00_04610 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain MID00_04610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_04610 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal MID00_04615 IPR027469 Cation efflux transmembrane domain superfamily MID00_04615 IPR036837 Cation efflux protein, cytoplasmic domain superfamily MID00_04615 IPR027470 Cation efflux protein, cytoplasmic domain MID00_04615 IPR002524 Cation efflux protein MID00_04620 IPR000847 Transcription regulator HTH, LysR MID00_04620 IPR036390 Winged helix DNA-binding domain superfamily MID00_04620 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04620 IPR005119 LysR, substrate-binding MID00_04625 IPR008579 Domain of unknown function DUF861, cupin-3 MID00_04625 IPR014710 RmlC-like jelly roll fold MID00_04625 IPR013096 Cupin 2, conserved barrel MID00_04625 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein MID00_04625 IPR011051 RmlC-like cupin domain superfamily MID00_04630 IPR016192 APOBEC/CMP deaminase, zinc-binding MID00_04630 IPR016193 Cytidine deaminase-like MID00_04630 IPR002125 Cytidine and deoxycytidylate deaminase domain MID00_04635 IPR015943 WD40/YVTN repeat-like-containing domain superfamily MID00_04635 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily MID00_04650 IPR001303 Class II aldolase/adducin N-terminal MID00_04650 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MID00_04655 IPR004736 MFS transporter, metabolite:H symporter MID00_04655 IPR011701 Major facilitator superfamily MID00_04655 IPR005829 Sugar transporter, conserved site MID00_04655 IPR020846 Major facilitator superfamily domain MID00_04655 IPR036259 MFS transporter superfamily MID00_04655 IPR005828 Major facilitator, sugar transporter-like MID00_04660 IPR001853 DSBA-like thioredoxin domain MID00_04660 IPR014440 HCCA isomerase/glutathione S-transferase kappa MID00_04660 IPR036249 Thioredoxin-like superfamily MID00_04665 IPR000160 GGDEF domain MID00_04665 IPR001789 Signal transduction response regulator, receiver domain MID00_04665 IPR011006 CheY-like superfamily MID00_04665 IPR029787 Nucleotide cyclase MID00_04670 IPR004713 Calcium/proton exchanger MID00_04670 IPR004837 Sodium/calcium exchanger membrane region MID00_04680 IPR005119 LysR, substrate-binding MID00_04680 IPR000847 Transcription regulator HTH, LysR MID00_04680 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04680 IPR036390 Winged helix DNA-binding domain superfamily MID00_04700 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like MID00_04700 IPR009057 Homeobox-like domain superfamily MID00_04700 IPR018060 DNA binding HTH domain, AraC-type MID00_04700 IPR018062 HTH domain AraC-type, conserved site MID00_04700 IPR020449 Transcription regulator HTH, AraC- type MID00_04705 IPR036736 ACP-like superfamily MID00_04705 IPR016291 Isochorismatase MID00_04705 IPR000868 Isochorismatase-like MID00_04705 IPR036380 Isochorismatase-like superfamily MID00_04705 IPR009081 Phosphopantetheine binding ACP domain MID00_04720 IPR005119 LysR, substrate-binding MID00_04720 IPR000847 Transcription regulator HTH, LysR MID00_04720 IPR036390 Winged helix DNA-binding domain superfamily MID00_04720 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04725 IPR001763 Rhodanese-like domain MID00_04725 IPR023695 Thiosulfate sulfurtransferase, bacterial MID00_04725 IPR036873 Rhodanese-like domain superfamily MID00_04730 IPR010130 Type I secretion outer membrane protein, TolC MID00_04730 IPR003423 Outer membrane efflux protein MID00_04735 IPR013766 Thioredoxin domain MID00_04735 IPR017937 Thioredoxin, conserved site MID00_04735 IPR036249 Thioredoxin-like superfamily MID00_04735 IPR005746 Thioredoxin MID00_04745 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_04745 IPR001036 Acriflavin resistance protein MID00_04750 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB MID00_04750 IPR006143 RND efflux pump, membrane fusion protein MID00_04750 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_04755 IPR011991 ArsR-like helix-turn-helix domain MID00_04755 IPR018334 ArsR-type transcription regulator, HTH motif MID00_04755 IPR036390 Winged helix DNA-binding domain superfamily MID00_04755 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04755 IPR001845 HTH ArsR-type DNA-binding domain MID00_04760 IPR022915 Peroxiredoxin, TDXH subfamily MID00_04760 IPR036249 Thioredoxin-like superfamily MID00_04760 IPR019479 Peroxiredoxin, C-terminal MID00_04760 IPR024706 Peroxiredoxin, AhpC-type MID00_04760 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_04760 IPR013766 Thioredoxin domain MID00_04765 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_04765 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_04765 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit MID00_04765 IPR014349 Rieske iron-sulphur protein MID00_04765 IPR005805 Rieske iron-sulphur protein, C-terminal MID00_04765 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal MID00_04790 IPR004537 Tellurite resistance methyltransferase, TehB MID00_04790 IPR015985 Tellurite resistance methyltransferase TehB-like domain MID00_04790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_04800 IPR001845 HTH ArsR-type DNA-binding domain MID00_04800 IPR036390 Winged helix DNA-binding domain superfamily MID00_04800 IPR011991 ArsR-like helix-turn-helix domain MID00_04800 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04805 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_04805 IPR001279 Metallo-beta-lactamase MID00_04810 IPR017871 ABC transporter, conserved site MID00_04810 IPR039421 Type I protein exporter MID00_04810 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04810 IPR003593 AAA+ ATPase domain MID00_04810 IPR003439 ABC transporter-like MID00_04810 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_04810 IPR011527 ABC transporter type 1, transmembrane domain MID00_04810 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD MID00_04815 IPR003593 AAA+ ATPase domain MID00_04815 IPR011527 ABC transporter type 1, transmembrane domain MID00_04815 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_04815 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC MID00_04815 IPR003439 ABC transporter-like MID00_04815 IPR017871 ABC transporter, conserved site MID00_04815 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04820 IPR002585 Cytochrome ubiquinol oxidase subunit 1 MID00_04825 IPR003317 Cytochrome ubiquinol oxidase subunit 2 MID00_04830 IPR011724 Cyd operon protein YbgT MID00_04830 IPR012994 Membrane bound YbgT-like MID00_04835 IPR011701 Major facilitator superfamily MID00_04835 IPR036259 MFS transporter superfamily MID00_04835 IPR020846 Major facilitator superfamily domain MID00_04845 IPR011547 SLC26A/SulP transporter domain MID00_04845 IPR001902 SLC26A/SulP transporter MID00_04845 IPR002645 STAS domain MID00_04845 IPR036513 STAS domain superfamily MID00_04850 IPR036390 Winged helix DNA-binding domain superfamily MID00_04850 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04850 IPR011991 ArsR-like helix-turn-helix domain MID00_04850 IPR001845 HTH ArsR-type DNA-binding domain MID00_04865 IPR029032 AhpD-like MID00_04865 IPR003779 Carboxymuconolactone decarboxylase-like MID00_04865 IPR004675 Alkylhydroperoxidase AhpD core MID00_04875 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site MID00_04875 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MID00_04875 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I MID00_04875 IPR006258 Dihydrolipoamide dehydrogenase MID00_04875 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_04875 IPR023753 FAD/NAD(P)-binding domain MID00_04875 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_04890 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04890 IPR036390 Winged helix DNA-binding domain superfamily MID00_04890 IPR005119 LysR, substrate-binding MID00_04890 IPR000847 Transcription regulator HTH, LysR MID00_04895 IPR011283 Acetoacetyl-CoA reductase MID00_04895 IPR036291 NAD(P)-binding domain superfamily MID00_04895 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_04895 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_04905 IPR029058 Alpha/Beta hydrolase fold MID00_04905 IPR000073 Alpha/beta hydrolase fold-1 MID00_04905 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I MID00_04905 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain MID00_04910 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_04910 IPR001647 DNA-binding HTH domain, TetR-type MID00_04910 IPR023769 Nucleoid occlusion factor SlmA MID00_04910 IPR009057 Homeobox-like domain superfamily MID00_04920 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_04920 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG MID00_04925 IPR003593 AAA+ ATPase domain MID00_04925 IPR003439 ABC transporter-like MID00_04925 IPR017871 ABC transporter, conserved site MID00_04925 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_04930 IPR000412 ABC-2 transporter MID00_04935 IPR000412 ABC-2 transporter MID00_04940 IPR003423 Outer membrane efflux protein MID00_04940 IPR010131 RND efflux system, outer membrane lipoprotein, NodT MID00_04950 IPR022712 Beta-Casp domain MID00_04950 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_04950 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain MID00_04950 IPR001279 Metallo-beta-lactamase MID00_04955 IPR021826 Domain of unknown function DUF3412 MID00_04955 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily MID00_04955 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal MID00_04955 IPR031100 LOG family MID00_04975 IPR036390 Winged helix DNA-binding domain superfamily MID00_04975 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_04975 IPR005119 LysR, substrate-binding MID00_04975 IPR000847 Transcription regulator HTH, LysR MID00_04990 IPR025669 AAA domain MID00_04990 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05035 IPR006171 TOPRIM domain MID00_05035 IPR023405 DNA topoisomerase, type IA, core domain MID00_05035 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MID00_05035 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MID00_05035 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MID00_05035 IPR003602 DNA topoisomerase, type IA, DNA-binding domain MID00_05035 IPR013497 DNA topoisomerase, type IA, central MID00_05035 IPR023406 DNA topoisomerase, type IA, active site MID00_05035 IPR003601 DNA topoisomerase, type IA, domain 2 MID00_05035 IPR000380 DNA topoisomerase, type IA MID00_05035 IPR005738 DNA topoisomerase III MID00_05035 IPR034144 DNA topoisomerase 3-like, TOPRIM domain MID00_05145 IPR010093 SinI-like, DNA-binding domain MID00_05145 IPR041657 Helix-turn-helix domain, group 17 MID00_05145 IPR009061 Putative DNA-binding domain superfamily MID00_05200 IPR037518 MPN domain MID00_05200 IPR025657 RadC-like JAB domain MID00_05200 IPR010994 RuvA domain 2-like MID00_05200 IPR020891 Uncharacterised protein family UPF0758, conserved site MID00_05200 IPR001405 Uncharacterised protein family UPF0758 MID00_05275 IPR004107 Integrase, SAM-like, N-terminal MID00_05275 IPR002104 Integrase, catalytic domain MID00_05275 IPR038488 Integrase, DNA-binding domain superfamily MID00_05275 IPR025166 Integrase, DNA-binding domain MID00_05275 IPR010998 Integrase/recombinase, N-terminal MID00_05275 IPR013762 Integrase-like, catalytic domain superfamily MID00_05275 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_05285 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type MID00_05285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_05290 IPR000073 Alpha/beta hydrolase fold-1 MID00_05290 IPR005944 Proline iminopeptidase MID00_05290 IPR029058 Alpha/Beta hydrolase fold MID00_05290 IPR002410 Peptidase S33 MID00_05295 IPR008867 Thiazole synthase MID00_05295 IPR003749 Sulfur carrier ThiS/MoaD-like MID00_05295 IPR013785 Aldolase-type TIM barrel MID00_05295 IPR010035 ThiS, thiamine-biosynthesis MID00_05295 IPR012675 Beta-grasp domain superfamily MID00_05295 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MID00_05295 IPR033983 Thiazole synthase ThiG MID00_05300 IPR018392 LysM domain MID00_05300 IPR036779 LysM domain superfamily MID00_05300 IPR014004 Transport-associated and nodulation domain, bacteria MID00_05300 IPR007055 BON domain MID00_05305 IPR003593 AAA+ ATPase domain MID00_05305 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05305 IPR004780 Signal recognition particle protein MID00_05305 IPR013822 Signal recognition particle SRP54, helical bundle MID00_05305 IPR004125 Signal recognition particle, SRP54 subunit, M-domain MID00_05305 IPR022941 Signal recognition particle, SRP54 subunit MID00_05305 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain MID00_05305 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily MID00_05305 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily MID00_05320 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily MID00_05320 IPR002502 N-acetylmuramoyl-L-alanine amidase domain MID00_05325 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site MID00_05325 IPR037396 FMN hydroxy acid dehydrogenase domain MID00_05325 IPR000262 FMN-dependent dehydrogenase MID00_05325 IPR013785 Aldolase-type TIM barrel MID00_05325 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent MID00_05330 IPR006620 Prolyl 4-hydroxylase, alpha subunit MID00_05330 IPR041097 PKHD-type hydroxylase C-terminal domain MID00_05330 IPR023550 PKHD-type hydroxylase MID00_05330 IPR005123 Oxoglutarate/iron-dependent dioxygenase MID00_05335 IPR010105 TonB-dependent siderophore receptor MID00_05335 IPR030148 Catecholate siderophore receptor Fiu MID00_05335 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_05335 IPR012910 TonB-dependent receptor, plug domain MID00_05335 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_05335 IPR039423 TonB-dependent receptor-like MID00_05335 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_05340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_05340 IPR020575 Heat shock protein Hsp90, N-terminal MID00_05340 IPR019805 Heat shock protein Hsp90, conserved site MID00_05340 IPR037196 HSP90, C-terminal domain MID00_05340 IPR001404 Heat shock protein Hsp90 family MID00_05340 IPR003594 Histidine kinase/HSP90-like ATPase MID00_05340 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_05350 IPR014910 Putative monooxygenase YdhR MID00_05350 IPR011008 Dimeric alpha-beta barrel MID00_05365 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05365 IPR000847 Transcription regulator HTH, LysR MID00_05365 IPR005119 LysR, substrate-binding MID00_05365 IPR036390 Winged helix DNA-binding domain superfamily MID00_05370 IPR005064 Bordetella uptake gene MID00_05370 IPR042100 Bordetella uptake gene, domain 1 MID00_05375 IPR000120 Amidase MID00_05375 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit MID00_05375 IPR036928 Amidase signature (AS) superfamily MID00_05375 IPR023631 Amidase signature domain MID00_05375 IPR020556 Amidase, conserved site MID00_05385 IPR001647 DNA-binding HTH domain, TetR-type MID00_05385 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_05385 IPR009057 Homeobox-like domain superfamily MID00_05390 IPR036259 MFS transporter superfamily MID00_05390 IPR020846 Major facilitator superfamily domain MID00_05390 IPR011701 Major facilitator superfamily MID00_05390 IPR004638 Drug resistance transporter EmrB-like MID00_05395 IPR002942 RNA-binding S4 domain MID00_05395 IPR036986 RNA-binding S4 domain superfamily MID00_05395 IPR025708 Heat shock protein 15 MID00_05400 IPR036849 Enolase-like, C-terminal domain superfamily MID00_05400 IPR034618 D-galactarolactone cycloisomerase MID00_05400 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site MID00_05400 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal MID00_05400 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain MID00_05400 IPR029017 Enolase-like, N-terminal MID00_05400 IPR029065 Enolase C-terminal domain-like MID00_05405 IPR005064 Bordetella uptake gene MID00_05405 IPR042100 Bordetella uptake gene, domain 1 MID00_05410 IPR003607 HD/PDEase domain MID00_05410 IPR006674 HD domain MID00_05420 IPR003791 Protein of unknown function UPF0178 MID00_05430 IPR023059 Foldase protein PrsA MID00_05430 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type MID00_05430 IPR037041 Trigger factor, C-terminal domain superfamily MID00_05430 IPR008880 Trigger factor, C-terminal MID00_05430 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site MID00_05430 IPR027304 Trigger factor/SurA domain superfamily MID00_05435 IPR022301 Integral membrane protein YjbE MID00_05435 IPR005496 Integral membrane protein TerC MID00_05450 IPR012910 TonB-dependent receptor, plug domain MID00_05450 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_05450 IPR011662 Secretin/TonB, short N-terminal domain MID00_05450 IPR039423 TonB-dependent receptor-like MID00_05450 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_05450 IPR010916 TonB box, conserved site MID00_05450 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_05450 IPR010105 TonB-dependent siderophore receptor MID00_05450 IPR010917 TonB-dependent receptor, conserved site MID00_05460 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_05460 IPR035906 MetI-like superfamily MID00_05465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_05465 IPR035906 MetI-like superfamily MID00_05470 IPR006059 Bacterial extracellular solute-binding protein MID00_05470 IPR006061 Solute-binding family 1, conserved site MID00_05475 IPR013611 Transport-associated OB, type 2 MID00_05475 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05475 IPR008995 Molybdate/tungstate binding, C-terminal MID00_05475 IPR017871 ABC transporter, conserved site MID00_05475 IPR003439 ABC transporter-like MID00_05475 IPR003593 AAA+ ATPase domain MID00_05480 IPR036390 Winged helix DNA-binding domain superfamily MID00_05480 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05480 IPR018356 Transcription regulator, HTH DeoR-type, conserved site MID00_05480 IPR037171 NagB/RpiA transferase-like MID00_05480 IPR014036 DeoR C-terminal sensor domain MID00_05480 IPR001034 DeoR-type HTH domain MID00_05485 IPR042100 Bordetella uptake gene, domain 1 MID00_05485 IPR005064 Bordetella uptake gene MID00_05495 IPR002823 Protein of unknown function DUF112, transmembrane MID00_05500 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_05500 IPR036249 Thioredoxin-like superfamily MID00_05500 IPR013766 Thioredoxin domain MID00_05500 IPR024706 Peroxiredoxin, AhpC-type MID00_05515 IPR004840 Amino acid permease, conserved site MID00_05515 IPR004841 Amino acid permease/ SLC12A domain MID00_05520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_05520 IPR000192 Aminotransferase class V domain MID00_05520 IPR010111 Kynureninase MID00_05520 IPR015424 Pyridoxal phosphate-dependent transferase MID00_05520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_05525 IPR011991 ArsR-like helix-turn-helix domain MID00_05525 IPR000485 AsnC-type HTH domain MID00_05525 IPR036390 Winged helix DNA-binding domain superfamily MID00_05525 IPR019885 Transcription regulator HTH, AsnC-type, conserved site MID00_05525 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MID00_05525 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05525 IPR011008 Dimeric alpha-beta barrel MID00_05525 IPR019888 Transcription regulator AsnC-type MID00_05530 IPR036390 Winged helix DNA-binding domain superfamily MID00_05530 IPR028082 Periplasmic binding protein-like I MID00_05530 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain MID00_05530 IPR000524 Transcription regulator HTH, GntR MID00_05530 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05545 IPR003804 L-lactate permease MID00_05550 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_05550 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05550 IPR036390 Winged helix DNA-binding domain superfamily MID00_05550 IPR011711 GntR, C-terminal MID00_05550 IPR000524 Transcription regulator HTH, GntR MID00_05555 IPR020920 L-lactate dehydrogenase, bacterial MID00_05555 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site MID00_05555 IPR037396 FMN hydroxy acid dehydrogenase domain MID00_05555 IPR000262 FMN-dependent dehydrogenase MID00_05555 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent MID00_05555 IPR013785 Aldolase-type TIM barrel MID00_05560 IPR006094 FAD linked oxidase, N-terminal MID00_05560 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 MID00_05560 IPR012256 D-lactate dehydrogenase MID00_05560 IPR016166 FAD-binding domain, PCMH-type MID00_05560 IPR036318 FAD-binding, type PCMH-like superfamily MID00_05560 IPR016167 FAD-binding, type PCMH, subdomain 1 MID00_05560 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_05560 IPR016164 FAD-linked oxidase-like, C-terminal MID00_05560 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 MID00_05560 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal MID00_05565 IPR017938 Riboflavin synthase-like beta-barrel MID00_05565 IPR003593 AAA+ ATPase domain MID00_05565 IPR011527 ABC transporter type 1, transmembrane domain MID00_05565 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_05565 IPR003439 ABC transporter-like MID00_05565 IPR017871 ABC transporter, conserved site MID00_05565 IPR007037 Siderophore-interacting protein, C-terminal domain MID00_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05565 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_05565 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_05565 IPR013113 FAD-binding 9, siderophore-interacting MID00_05570 IPR017871 ABC transporter, conserved site MID00_05570 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05570 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_05570 IPR011527 ABC transporter type 1, transmembrane domain MID00_05570 IPR003593 AAA+ ATPase domain MID00_05570 IPR003439 ABC transporter-like MID00_05575 IPR037294 ABC transporter, BtuC-like MID00_05575 IPR000522 ABC transporter, permease protein, BtuC-like MID00_05580 IPR037294 ABC transporter, BtuC-like MID00_05580 IPR000522 ABC transporter, permease protein, BtuC-like MID00_05585 IPR003593 AAA+ ATPase domain MID00_05585 IPR017871 ABC transporter, conserved site MID00_05585 IPR003439 ABC transporter-like MID00_05585 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05590 IPR002491 ABC transporter periplasmic binding domain MID00_05590 IPR033870 FatB domain MID00_05595 IPR010105 TonB-dependent siderophore receptor MID00_05595 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_05595 IPR030149 TonB-dependent siderophore receptor FcuA/FatA MID00_05595 IPR010917 TonB-dependent receptor, conserved site MID00_05595 IPR012910 TonB-dependent receptor, plug domain MID00_05595 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_05595 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_05595 IPR010916 TonB box, conserved site MID00_05595 IPR039423 TonB-dependent receptor-like MID00_05605 IPR011789 Cu(I)-responsive transcriptional regulator MID00_05605 IPR000551 MerR-type HTH domain MID00_05605 IPR009061 Putative DNA-binding domain superfamily MID00_05605 IPR015358 Transcription regulator MerR, DNA binding MID00_05610 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_05610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_05610 IPR012675 Beta-grasp domain superfamily MID00_05610 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_05610 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_05610 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase MID00_05610 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_05610 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_05610 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_05610 IPR017938 Riboflavin synthase-like beta-barrel MID00_05615 IPR006143 RND efflux pump, membrane fusion protein MID00_05615 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_05620 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_05620 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 MID00_05620 IPR001036 Acriflavin resistance protein MID00_05625 IPR003423 Outer membrane efflux protein MID00_05625 IPR010131 RND efflux system, outer membrane lipoprotein, NodT MID00_05630 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05630 IPR036390 Winged helix DNA-binding domain superfamily MID00_05630 IPR000835 MarR-type HTH domain MID00_05630 IPR023187 Transcriptional regulator MarR-type, conserved site MID00_05640 IPR017850 Alkaline-phosphatase-like, core domain superfamily MID00_05640 IPR032506 Domain of unknown function DUF4976 MID00_05640 IPR000917 Sulfatase, N-terminal MID00_05650 IPR010287 Domain of unknown function DUF892 MID00_05650 IPR012347 Ferritin-like MID00_05650 IPR009078 Ferritin-like superfamily MID00_05660 IPR005119 LysR, substrate-binding MID00_05660 IPR000847 Transcription regulator HTH, LysR MID00_05660 IPR036390 Winged helix DNA-binding domain superfamily MID00_05660 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05665 IPR020846 Major facilitator superfamily domain MID00_05665 IPR036259 MFS transporter superfamily MID00_05665 IPR011701 Major facilitator superfamily MID00_05670 IPR018170 Aldo/keto reductase, conserved site MID00_05670 IPR020471 Aldo/keto reductase MID00_05670 IPR023210 NADP-dependent oxidoreductase domain MID00_05670 IPR036812 NADP-dependent oxidoreductase domain superfamily MID00_05675 IPR001702 Porin, Gram-negative type MID00_05675 IPR023614 Porin domain superfamily MID00_05675 IPR033900 Porin domain, Gram-negative type MID00_05675 IPR002299 Porin, Neisseria sp. type MID00_05700 IPR021810 Protein of unknown function DUF3387 MID00_05700 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_05700 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal MID00_05700 IPR004473 Restriction endonuclease, type I, HsdR MID00_05700 IPR040980 SWI2/SNF2 ATPase MID00_05700 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05705 IPR000055 Restriction endonuclease, type I, HsdS MID00_05710 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain MID00_05710 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily MID00_05710 IPR003356 DNA methylase, adenine-specific MID00_05710 IPR004546 Restriction endonuclease, type I, HsdM MID00_05710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_05710 IPR002052 DNA methylase, N-6 adenine-specific, conserved site MID00_05740 IPR020891 Uncharacterised protein family UPF0758, conserved site MID00_05740 IPR025657 RadC-like JAB domain MID00_05740 IPR037518 MPN domain MID00_05740 IPR001405 Uncharacterised protein family UPF0758 MID00_05745 IPR011604 Exonuclease, phage-type/RecB, C-terminal MID00_05745 IPR017482 Putative phage-type endonuclease MID00_05745 IPR011335 Restriction endonuclease type II-like MID00_05745 IPR019080 YqaJ viral recombinase MID00_05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05760 IPR029464 Type I restriction enzyme R protein, N-terminal domain MID00_05760 IPR001650 Helicase, C-terminal MID00_05760 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_05760 IPR006935 Helicase/UvrB, N-terminal MID00_05760 IPR013670 EcoEI R protein C-terminal domain MID00_05770 IPR010998 Integrase/recombinase, N-terminal MID00_05770 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_05770 IPR013762 Integrase-like, catalytic domain superfamily MID00_05770 IPR002104 Integrase, catalytic domain MID00_05770 IPR025166 Integrase, DNA-binding domain MID00_05770 IPR038488 Integrase, DNA-binding domain superfamily MID00_05780 IPR002549 Transmembrane protein TqsA-like MID00_05790 IPR005064 Bordetella uptake gene MID00_05790 IPR042100 Bordetella uptake gene, domain 1 MID00_05795 IPR003673 CoA-transferase family III MID00_05795 IPR023606 CoA-transferase family III domain superfamily MID00_05800 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_05800 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_05800 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_05800 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_05800 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_05800 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_05810 IPR022926 NH(3)-dependent NAD(+) synthetase MID00_05810 IPR022310 NAD/GMP synthase MID00_05810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_05810 IPR003694 NAD(+) synthetase MID00_05820 IPR023631 Amidase signature domain MID00_05820 IPR036928 Amidase signature (AS) superfamily MID00_05820 IPR000120 Amidase MID00_05820 IPR020556 Amidase, conserved site MID00_05825 IPR007387 TRAP transporter, small membrane protein DctQ MID00_05825 IPR004681 TRAP transporter large membrane protein DctM MID00_05825 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_05835 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_05835 IPR004682 TRAP transporter solute receptor, DctP family MID00_05835 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_05845 IPR042096 Dihydroxy-acid dehydratase, C-terminal MID00_05845 IPR037237 IlvD/EDD, N-terminal domain MID00_05845 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site MID00_05845 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase MID00_05845 IPR004404 Dihydroxy-acid dehydratase MID00_05850 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type MID00_05850 IPR033129 Phosphoenolpyruvate carboxylase, His active site MID00_05850 IPR021135 Phosphoenolpyruvate carboxylase MID00_05850 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site MID00_05850 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_05855 IPR002781 Transmembrane protein TauE-like MID00_05860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_05860 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily MID00_05860 IPR002903 Ribosomal RNA small subunit methyltransferase H MID00_05875 IPR002646 Poly A polymerase, head domain MID00_05875 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain MID00_05875 IPR012006 tRNA nucleotidyltransferase, proteobacteria MID00_05880 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily MID00_05880 IPR012289 Lytic transglycosylase, superhelical linker MID00_05880 IPR000189 Prokaryotic transglycosylase, active site MID00_05880 IPR008258 Transglycosylase SLT domain 1 MID00_05880 IPR023346 Lysozyme-like domain superfamily MID00_05880 IPR008939 Lytic transglycosylase, superhelical U-shaped MID00_05890 IPR003171 Methylenetetrahydrofolate reductase MID00_05890 IPR004620 5,10-methylenetetrahydrofolate reductase MID00_05890 IPR029041 FAD-linked oxidoreductase-like MID00_05895 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV MID00_05900 IPR042172 Adenosylhomocysteinase-like superfamily MID00_05900 IPR000043 Adenosylhomocysteinase-like MID00_05900 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MID00_05900 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site MID00_05900 IPR036291 NAD(P)-binding domain superfamily MID00_05905 IPR022629 S-adenosylmethionine synthetase, central domain MID00_05905 IPR002133 S-adenosylmethionine synthetase MID00_05905 IPR022636 S-adenosylmethionine synthetase superfamily MID00_05905 IPR022628 S-adenosylmethionine synthetase, N-terminal MID00_05905 IPR022631 S-adenosylmethionine synthetase, conserved site MID00_05905 IPR022630 S-adenosylmethionine synthetase, C-terminal MID00_05915 IPR004960 Bacterial lipid A biosynthesis acyltransferase MID00_05915 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase MID00_05920 IPR001653 Diaminopimelate epimerase, DapF MID00_05920 IPR018510 Diaminopimelate epimerase, active site MID00_05930 IPR002104 Integrase, catalytic domain MID00_05930 IPR013762 Integrase-like, catalytic domain superfamily MID00_05930 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_05930 IPR011931 Tyrosine recombinase XerC MID00_05930 IPR023009 Tyrosine recombinase XerC/XerD MID00_05930 IPR010998 Integrase/recombinase, N-terminal MID00_05930 IPR004107 Integrase, SAM-like, N-terminal MID00_05935 IPR006129 Adhesin B MID00_05935 IPR006128 Adhesion lipoprotein MID00_05935 IPR006127 Periplasmic solute binding protein, ZnuA-like MID00_05940 IPR037294 ABC transporter, BtuC-like MID00_05940 IPR001626 ABC transporter, TroCD-like MID00_05945 IPR017871 ABC transporter, conserved site MID00_05945 IPR003439 ABC transporter-like MID00_05945 IPR003593 AAA+ ATPase domain MID00_05945 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05950 IPR002481 Ferric-uptake regulator MID00_05950 IPR036390 Winged helix DNA-binding domain superfamily MID00_05950 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_05955 IPR036627 CobW-like, C-terminal domain superfamily MID00_05955 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MID00_05955 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05955 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MID00_05960 IPR012784 RNA polymerase-binding transcription factor DksA MID00_05960 IPR037187 DksA, N-terminal domain superfamily MID00_05960 IPR000962 Zinc finger, DksA/TraR C4-type MID00_05960 IPR020458 Zinc finger, DksA/TraR C4-type conserved site MID00_05965 IPR001353 Proteasome, subunit alpha/beta MID00_05965 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_05965 IPR022281 ATP-dependent protease, HslV subunit MID00_05965 IPR023333 Proteasome B-type subunit MID00_05970 IPR003593 AAA+ ATPase domain MID00_05970 IPR003959 ATPase, AAA-type, core MID00_05970 IPR019489 Clp ATPase, C-terminal MID00_05970 IPR004491 Heat shock protein HslU MID00_05970 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_05985 IPR016030 Cobalamin adenosyltransferase-like MID00_05985 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type MID00_05985 IPR036451 Cobalamin adenosyltransferase-like superfamily MID00_06000 IPR005814 Aminotransferase class-III MID00_06000 IPR015424 Pyridoxal phosphate-dependent transferase MID00_06000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_06000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_06010 IPR036390 Winged helix DNA-binding domain superfamily MID00_06010 IPR005119 LysR, substrate-binding MID00_06010 IPR000847 Transcription regulator HTH, LysR MID00_06010 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06015 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria MID00_06015 IPR003156 DHHA1 domain MID00_06015 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily MID00_06015 IPR009000 Translation protein, beta-barrel domain superfamily MID00_06015 IPR012947 Threonyl/alanyl tRNA synthetase, SAD MID00_06015 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal MID00_06015 IPR002318 Alanine-tRNA ligase, class IIc MID00_06015 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain MID00_06015 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily MID00_06025 IPR001123 Amino acid exporter protein, LeuE-type MID00_06025 IPR004778 Homoserine/Threonine efflux protein MID00_06050 IPR024973 ESPR domain MID00_06050 IPR028230 Trimeric autotransporter adhesin, tryptophan-ring motif MID00_06050 IPR008635 Coiled stalk of trimeric autotransporter adhesin MID00_06050 IPR037174 Trimeric adhesin MID00_06050 IPR005594 YadA-like, C-terminal MID00_06055 IPR018060 DNA binding HTH domain, AraC-type MID00_06055 IPR018062 HTH domain AraC-type, conserved site MID00_06055 IPR009057 Homeobox-like domain superfamily MID00_06065 IPR035959 RutC-like superfamily MID00_06065 IPR019897 RidA, conserved site MID00_06065 IPR006056 RidA family MID00_06065 IPR006175 YjgF/YER057c/UK114 family MID00_06070 IPR006056 RidA family MID00_06070 IPR019897 RidA, conserved site MID00_06070 IPR035959 RutC-like superfamily MID00_06070 IPR006175 YjgF/YER057c/UK114 family MID00_06080 IPR007300 CidB/LrgB family MID00_06080 IPR005261 Conserved hypothetical protein CHP00659 MID00_06085 IPR005115 Uncharacterised domain UPF0126 MID00_06090 IPR036259 MFS transporter superfamily MID00_06090 IPR020846 Major facilitator superfamily domain MID00_06090 IPR011701 Major facilitator superfamily MID00_06090 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 MID00_06100 IPR008220 Homoserine/serine acetyltransferase MetX-like MID00_06100 IPR000073 Alpha/beta hydrolase fold-1 MID00_06100 IPR029058 Alpha/Beta hydrolase fold MID00_06115 IPR006334 Glutamate--cysteine ligase, monofunctional MID00_06115 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain MID00_06115 IPR007370 Glutamate--cysteine ligase MID00_06120 IPR012910 TonB-dependent receptor, plug domain MID00_06120 IPR039426 Vitamin B12 transporter BtuB-like MID00_06120 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_06120 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_06135 IPR036909 Cytochrome c-like domain superfamily MID00_06135 IPR009056 Cytochrome c-like domain MID00_06135 IPR002323 Cytochrome c, class IE MID00_06145 IPR036259 MFS transporter superfamily MID00_06145 IPR020846 Major facilitator superfamily domain MID00_06145 IPR011701 Major facilitator superfamily MID00_06145 IPR000849 Sugar phosphate transporter MID00_06155 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_06155 IPR012675 Beta-grasp domain superfamily MID00_06155 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_06155 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_06155 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_06155 IPR000951 Phthalate dioxygenase reductase MID00_06155 IPR017938 Riboflavin synthase-like beta-barrel MID00_06155 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_06155 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_06160 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_06160 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_06175 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_06175 IPR011264 Betaine aldehyde dehydrogenase MID00_06175 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_06175 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_06175 IPR016161 Aldehyde/histidinol dehydrogenase MID00_06175 IPR015590 Aldehyde dehydrogenase domain MID00_06175 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_06180 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding MID00_06180 IPR002811 Aspartate dehydrogenase MID00_06180 IPR020626 L-aspartate dehydrogenase, prokaryotic MID00_06180 IPR011182 L-aspartate dehydrogenase MID00_06180 IPR036291 NAD(P)-binding domain superfamily MID00_06185 IPR012000 Thiamine pyrophosphate enzyme, central domain MID00_06185 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain MID00_06185 IPR029035 DHS-like NAD/FAD-binding domain superfamily MID00_06185 IPR029061 Thiamin diphosphate-binding fold MID00_06185 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding MID00_06190 IPR036291 NAD(P)-binding domain superfamily MID00_06190 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_06190 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_06195 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06195 IPR005471 Transcription regulator IclR, N-terminal MID00_06195 IPR014757 Transcription regulator IclR, C-terminal MID00_06195 IPR036390 Winged helix DNA-binding domain superfamily MID00_06195 IPR029016 GAF-like domain superfamily MID00_06210 IPR036291 NAD(P)-binding domain superfamily MID00_06210 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_06210 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_06215 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal MID00_06215 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site MID00_06215 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding MID00_06215 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC MID00_06215 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain MID00_06215 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_06215 IPR036291 NAD(P)-binding domain superfamily MID00_06220 IPR003673 CoA-transferase family III MID00_06220 IPR023606 CoA-transferase family III domain superfamily MID00_06230 IPR001753 Enoyl-CoA hydratase/isomerase MID00_06230 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_06230 IPR029045 ClpP/crotonase-like domain superfamily MID00_06235 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily MID00_06235 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_06235 IPR002489 Glutamate synthase, alpha subunit, C-terminal MID00_06235 IPR017932 Glutamine amidotransferase type 2 domain MID00_06235 IPR013785 Aldolase-type TIM barrel MID00_06235 IPR006982 Glutamate synthase, central-N MID00_06235 IPR002932 Glutamate synthase domain MID00_06240 IPR009051 Alpha-helical ferredoxin MID00_06240 IPR028261 Dihydroprymidine dehydrogenase domain II MID00_06240 IPR023753 FAD/NAD(P)-binding domain MID00_06240 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 MID00_06240 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_06250 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06250 IPR013986 DExx box DNA helicase domain superfamily MID00_06250 IPR000212 DNA helicase, UvrD/REP type MID00_06250 IPR005752 ATP-dependent DNA helicase Rep MID00_06250 IPR014016 UvrD-like helicase, ATP-binding domain MID00_06250 IPR034739 UvrD/AddA helicase, N-terminal MID00_06250 IPR014017 UvrD-like DNA helicase, C-terminal MID00_06255 IPR041222 Primosomal protein N', 3' DNA-binding domain MID00_06255 IPR005259 Primosomal protein N' MID00_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06255 IPR001650 Helicase, C-terminal MID00_06255 IPR041236 Primosomal protein N, C-terminal domain MID00_06255 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain MID00_06255 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_06255 IPR011545 DEAD/DEAH box helicase domain MID00_06255 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily MID00_06260 IPR038071 UROD/MetE-like superfamily MID00_06260 IPR006361 Uroporphyrinogen decarboxylase HemE MID00_06260 IPR000257 Uroporphyrinogen decarboxylase (URO-D) MID00_06270 IPR020449 Transcription regulator HTH, AraC- type MID00_06270 IPR018060 DNA binding HTH domain, AraC-type MID00_06270 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal MID00_06270 IPR009057 Homeobox-like domain superfamily MID00_06280 IPR016008 Amine dehydrogenase light chain MID00_06280 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily MID00_06280 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain MID00_06280 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_06285 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_06285 IPR013478 Methylamine dehydrogenase accessory protein MauD MID00_06285 IPR036249 Thioredoxin-like superfamily MID00_06285 IPR013766 Thioredoxin domain MID00_06295 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like MID00_06295 IPR015943 WD40/YVTN repeat-like-containing domain superfamily MID00_06295 IPR009451 Amine dehydrogenase heavy chain MID00_06305 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_06305 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_06305 IPR015590 Aldehyde dehydrogenase domain MID00_06305 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_06305 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_06305 IPR016161 Aldehyde/histidinol dehydrogenase MID00_06310 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site MID00_06310 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding MID00_06310 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain MID00_06310 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain MID00_06310 IPR023546 Methylated-DNA--protein-cysteine methyltransferase MID00_06310 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily MID00_06310 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06320 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA MID00_06320 IPR013785 Aldolase-type TIM barrel MID00_06320 IPR002220 DapA-like MID00_06320 IPR020625 Schiff base-forming aldolase, active site MID00_06325 IPR035906 MetI-like superfamily MID00_06325 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_06325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_06330 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_06330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_06330 IPR035906 MetI-like superfamily MID00_06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06335 IPR003593 AAA+ ATPase domain MID00_06335 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type MID00_06335 IPR003439 ABC transporter-like MID00_06335 IPR017871 ABC transporter, conserved site MID00_06340 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_06340 IPR018313 Solute-binding protein family 3, conserved site MID00_06345 IPR036390 Winged helix DNA-binding domain superfamily MID00_06345 IPR005119 LysR, substrate-binding MID00_06345 IPR037414 Transcriptional activator protein LysR, PBP2 domain MID00_06345 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06345 IPR000847 Transcription regulator HTH, LysR MID00_06355 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06355 IPR015859 ABC transporter, taurine import, TauD MID00_06355 IPR017871 ABC transporter, conserved site MID00_06355 IPR003439 ABC transporter-like MID00_06355 IPR003593 AAA+ ATPase domain MID00_06360 IPR035906 MetI-like superfamily MID00_06360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_06365 IPR006680 Amidohydrolase-related MID00_06365 IPR023512 Deaminase MtaD/DadD MID00_06365 IPR032466 Metal-dependent hydrolase MID00_06365 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_06370 IPR017593 Allantoinase MID00_06370 IPR006680 Amidohydrolase-related MID00_06370 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_06370 IPR032466 Metal-dependent hydrolase MID00_06375 IPR010158 Amidase, carbamoylase-type MID00_06375 IPR036264 Bacterial exopeptidase dimerisation domain MID00_06375 IPR002933 Peptidase M20 MID00_06380 IPR012349 FMN-binding split barrel MID00_06380 IPR002563 Flavin reductase like domain MID00_06395 IPR002575 Aminoglycoside phosphotransferase MID00_06395 IPR024165 Aminoglycoside 3-phosphotransferase MID00_06395 IPR011009 Protein kinase-like domain superfamily MID00_06400 IPR000182 GNAT domain MID00_06400 IPR016181 Acyl-CoA N-acyltransferase MID00_06405 IPR007344 GrpB/Dephospho-CoA kinase MID00_06415 IPR007349 Domain of unknown function DUF418 MID00_06425 IPR000847 Transcription regulator HTH, LysR MID00_06425 IPR005119 LysR, substrate-binding MID00_06425 IPR036390 Winged helix DNA-binding domain superfamily MID00_06425 IPR037416 Nodulation protein D, PBP2 MID00_06425 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06430 IPR005785 Branched-chain amino acid aminotransferase I MID00_06430 IPR033939 Branched-chain aminotransferase MID00_06430 IPR036038 Aminotransferase-like, PLP-dependent enzymes MID00_06430 IPR001544 Aminotransferase class IV MID00_06430 IPR018300 Aminotransferase, class IV, conserved site MID00_06440 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MID00_06440 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal MID00_06440 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 MID00_06440 IPR016039 Thiolase-like MID00_06455 IPR012093 Pirin MID00_06455 IPR008778 Pirin, C-terminal domain MID00_06455 IPR003829 Pirin, N-terminal domain MID00_06455 IPR014710 RmlC-like jelly roll fold MID00_06455 IPR011051 RmlC-like cupin domain superfamily MID00_06465 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_06465 IPR005496 Integral membrane protein TerC MID00_06465 IPR005170 Transporter-associated domain MID00_06465 IPR000644 CBS domain MID00_06465 IPR036318 FAD-binding, type PCMH-like superfamily MID00_06475 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06475 IPR036390 Winged helix DNA-binding domain superfamily MID00_06475 IPR037416 Nodulation protein D, PBP2 MID00_06475 IPR005119 LysR, substrate-binding MID00_06475 IPR000847 Transcription regulator HTH, LysR MID00_06485 IPR004812 Drug resistance transporter Bcr/CmlA subfamily MID00_06485 IPR011701 Major facilitator superfamily MID00_06485 IPR020846 Major facilitator superfamily domain MID00_06485 IPR036259 MFS transporter superfamily MID00_06485 IPR004734 Multidrug resistance protein MID00_06490 IPR014014 RNA helicase, DEAD-box type, Q motif MID00_06490 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_06490 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MID00_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06490 IPR011545 DEAD/DEAH box helicase domain MID00_06490 IPR001650 Helicase, C-terminal MID00_06490 IPR023554 ATP-dependent RNA helicase RhlB type MID00_06500 IPR037294 ABC transporter, BtuC-like MID00_06500 IPR000522 ABC transporter, permease protein, BtuC-like MID00_06505 IPR003593 AAA+ ATPase domain MID00_06505 IPR015863 ABC transporter, hemin import, HmuV MID00_06505 IPR017871 ABC transporter, conserved site MID00_06505 IPR003439 ABC transporter-like MID00_06505 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06525 IPR022694 3-hydroxyacyl-CoA dehydrogenase MID00_06525 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding MID00_06525 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal MID00_06525 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_06525 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_06525 IPR036291 NAD(P)-binding domain superfamily MID00_06525 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site MID00_06535 IPR003439 ABC transporter-like MID00_06535 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06535 IPR003593 AAA+ ATPase domain MID00_06540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_06540 IPR035906 MetI-like superfamily MID00_06555 IPR028081 Leucine-binding protein domain MID00_06555 IPR028082 Periplasmic binding protein-like I MID00_06555 IPR000709 Leu/Ile/Val-binding protein MID00_06570 IPR003593 AAA+ ATPase domain MID00_06570 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06570 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_06570 IPR003439 ABC transporter-like MID00_06570 IPR017871 ABC transporter, conserved site MID00_06575 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06575 IPR017871 ABC transporter, conserved site MID00_06575 IPR003593 AAA+ ATPase domain MID00_06575 IPR003439 ABC transporter-like MID00_06575 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_06585 IPR020845 AMP-binding, conserved site MID00_06585 IPR011963 2,3-dihydroxybenzoate-AMP ligase MID00_06585 IPR000873 AMP-dependent synthetase/ligase MID00_06585 IPR025110 AMP-binding enzyme, C-terminal domain MID00_06590 IPR009081 Phosphopantetheine binding ACP domain MID00_06590 IPR036380 Isochorismatase-like superfamily MID00_06590 IPR000868 Isochorismatase-like MID00_06590 IPR016291 Isochorismatase MID00_06590 IPR036736 ACP-like superfamily MID00_06595 IPR001031 Thioesterase MID00_06595 IPR009081 Phosphopantetheine binding ACP domain MID00_06595 IPR001242 Condensation domain MID00_06595 IPR020802 Polyketide synthase, thioesterase domain MID00_06595 IPR029058 Alpha/Beta hydrolase fold MID00_06595 IPR036736 ACP-like superfamily MID00_06595 IPR025110 AMP-binding enzyme, C-terminal domain MID00_06595 IPR020845 AMP-binding, conserved site MID00_06595 IPR000873 AMP-dependent synthetase/ligase MID00_06595 IPR042099 AMP-dependent synthetase-like superfamily MID00_06595 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily MID00_06595 IPR020806 Polyketide synthase, phosphopantetheine-binding domain MID00_06595 IPR010071 Amino acid adenylation domain MID00_06600 IPR036259 MFS transporter superfamily MID00_06600 IPR010290 Transmembrane secretion effector MID00_06600 IPR020846 Major facilitator superfamily domain MID00_06600 IPR023722 Enterobactin exporter, EntS MID00_06610 IPR005801 ADC synthase MID00_06610 IPR004561 Isochorismate synthase MID00_06610 IPR015890 Chorismate-utilising enzyme, C-terminal MID00_06615 IPR009081 Phosphopantetheine binding ACP domain MID00_06615 IPR000868 Isochorismatase-like MID00_06615 IPR016291 Isochorismatase MID00_06615 IPR036736 ACP-like superfamily MID00_06615 IPR036380 Isochorismatase-like superfamily MID00_06620 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_06620 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_06620 IPR036291 NAD(P)-binding domain superfamily MID00_06620 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase MID00_06630 IPR004090 Chemotaxis methyl-accepting receptor MID00_06630 IPR003660 HAMP domain MID00_06630 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain MID00_06630 IPR033480 Single Cache domain 2 MID00_06640 IPR036249 Thioredoxin-like superfamily MID00_06640 IPR012336 Thioredoxin-like fold MID00_06640 IPR017937 Thioredoxin, conserved site MID00_06640 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal MID00_06640 IPR033954 Disulphide bond isomerase, DsbC/G MID00_06645 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site MID00_06645 IPR002938 FAD-binding domain MID00_06645 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_06645 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 MID00_06650 IPR036908 RlpA-like domain superfamily MID00_06650 IPR005300 Lytic transglycosylase MltA, domain B MID00_06650 IPR034654 MltA, 3D domain MID00_06650 IPR026044 Membrane-bound lytic murein transglycosylase A MID00_06650 IPR010611 3D domain MID00_06655 IPR023065 Uncharacterised protein family ApaG MID00_06655 IPR036767 ApaG domain superfamily MID00_06655 IPR007474 ApaG domain MID00_06660 IPR000056 Ribulose-phosphate 3-epimerase-like MID00_06660 IPR026019 Ribulose-phosphate 3-epimerase MID00_06660 IPR013785 Aldolase-type TIM barrel MID00_06660 IPR011060 Ribulose-phosphate binding barrel MID00_06670 IPR036412 HAD-like superfamily MID00_06670 IPR006439 HAD hydrolase, subfamily IA MID00_06670 IPR041492 Haloacid dehalogenase-like hydrolase MID00_06670 IPR023214 HAD superfamily MID00_06670 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MID00_06670 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic MID00_06670 IPR037512 Phosphoglycolate phosphatase, prokaryotic MID00_06675 IPR006805 Anthranilate synthase component I, N-terminal MID00_06675 IPR005801 ADC synthase MID00_06675 IPR019999 Anthranilate synthase component I-like MID00_06675 IPR005256 Anthranilate synthase component I, PabB-like MID00_06675 IPR015890 Chorismate-utilising enzyme, C-terminal MID00_06680 IPR029062 Class I glutamine amidotransferase-like MID00_06680 IPR017926 Glutamine amidotransferase MID00_06680 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain MID00_06685 IPR000312 Glycosyl transferase, family 3 MID00_06685 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily MID00_06685 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily MID00_06685 IPR005940 Anthranilate phosphoribosyl transferase MID00_06685 IPR017459 Glycosyl transferase family 3, N-terminal domain MID00_06690 IPR001468 Indole-3-glycerol phosphate synthase, conserved site MID00_06690 IPR013785 Aldolase-type TIM barrel MID00_06690 IPR011060 Ribulose-phosphate binding barrel MID00_06690 IPR013798 Indole-3-glycerol phosphate synthase MID00_06715 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 MID00_06715 IPR003033 SCP2 sterol-binding domain MID00_06715 IPR036527 SCP2 sterol-binding domain superfamily MID00_06715 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT MID00_06725 IPR001539 Peptidase U32 MID00_06725 IPR036206 Thiamin phosphate synthase superfamily MID00_06770 IPR002043 Uracil-DNA glycosylase family 1 MID00_06770 IPR005122 Uracil-DNA glycosylase-like MID00_06770 IPR036895 Uracil-DNA glycosylase-like domain superfamily MID00_06770 IPR018085 Uracil-DNA glycosylase, active site MID00_06780 IPR013785 Aldolase-type TIM barrel MID00_06780 IPR006638 Elp3/MiaB/NifB MID00_06780 IPR031691 Lipoyl synthase, N-terminal MID00_06780 IPR003698 Lipoyl synthase MID00_06780 IPR007197 Radical SAM MID00_06785 IPR029045 ClpP/crotonase-like domain superfamily MID00_06785 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_06785 IPR001753 Enoyl-CoA hydratase/isomerase MID00_06785 IPR014748 Enoyl-CoA hydratase, C-terminal MID00_06790 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain MID00_06790 IPR000544 Octanoyltransferase MID00_06790 IPR020605 Octanoyltransferase, conserved site MID00_06795 IPR007454 Uncharacterised protein family UPF0250 MID00_06795 IPR027471 YbeD-like domain superfamily MID00_06800 IPR001544 Aminotransferase class IV MID00_06800 IPR018300 Aminotransferase, class IV, conserved site MID00_06800 IPR036038 Aminotransferase-like, PLP-dependent enzymes MID00_06800 IPR005784 D-amino acid aminotransferase MID00_06805 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A MID00_06805 IPR015956 Penicillin-binding protein, C-terminal domain superfamily MID00_06805 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal MID00_06805 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal MID00_06805 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily MID00_06805 IPR012338 Beta-lactamase/transpeptidase-like MID00_06815 IPR004408 Biotin--acetyl-CoA-carboxylase ligase MID00_06815 IPR004409 Biotin operon repressor, helix-turn-helix domain MID00_06815 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain MID00_06815 IPR003142 Biotin protein ligase, C-terminal MID00_06815 IPR030855 Bifunctional ligase/repressor BirA MID00_06815 IPR008988 Transcriptional repressor, C-terminal MID00_06820 IPR004619 Type III pantothenate kinase MID00_06825 IPR029044 Nucleotide-diphospho-sugar transferases MID00_06825 IPR005835 Nucleotidyl transferase domain MID00_06825 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type MID00_06830 IPR002059 Cold-shock protein, DNA-binding MID00_06830 IPR019844 Cold-shock (CSD) domain MID00_06830 IPR011129 Cold shock domain MID00_06830 IPR012156 Cold shock, CspA MID00_06830 IPR012340 Nucleic acid-binding, OB-fold MID00_06835 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily MID00_06835 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal MID00_06835 IPR001296 Glycosyl transferase, family 1 MID00_06835 IPR039901 3-deoxy-D-manno-octulosonic acid transferase MID00_06840 IPR011908 Lipopolysaccharide heptosyltransferase I MID00_06840 IPR002201 Glycosyl transferase, family 9 MID00_06845 IPR005119 LysR, substrate-binding MID00_06845 IPR000847 Transcription regulator HTH, LysR MID00_06845 IPR036390 Winged helix DNA-binding domain superfamily MID00_06845 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06850 IPR016938 Uncharacterised protein family UPF0317 MID00_06850 IPR038021 Putative hydro-lyase MID00_06850 IPR009906 D-glutamate cyclase MID00_06865 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_06865 IPR004681 TRAP transporter large membrane protein DctM MID00_06875 IPR036928 Amidase signature (AS) superfamily MID00_06875 IPR023631 Amidase signature domain MID00_06875 IPR000120 Amidase MID00_06880 IPR000620 EamA domain MID00_06885 IPR036477 Formyl transferase, N-terminal domain superfamily MID00_06885 IPR005794 Methionyl-tRNA formyltransferase MID00_06885 IPR005793 Formyl transferase, C-terminal MID00_06885 IPR037022 Formyl transferase, C-terminal domain superfamily MID00_06885 IPR002376 Formyl transferase, N-terminal MID00_06885 IPR011034 Formyl transferase-like, C-terminal domain superfamily MID00_06885 IPR001555 Phosphoribosylglycinamide formyltransferase, active site MID00_06885 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain MID00_06890 IPR023635 Peptide deformylase MID00_06890 IPR036821 Peptide deformylase superfamily MID00_06895 IPR003488 DNA recombination-mediator protein A MID00_06895 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_06895 IPR041614 DprA, winged helix domain MID00_06900 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site MID00_06900 IPR013785 Aldolase-type TIM barrel MID00_06900 IPR000891 Pyruvate carboxyltransferase MID00_06910 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter MID00_06910 IPR018313 Solute-binding protein family 3, conserved site MID00_06910 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_06920 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06920 IPR017871 ABC transporter, conserved site MID00_06920 IPR003439 ABC transporter-like MID00_06920 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_06920 IPR003593 AAA+ ATPase domain MID00_06935 IPR001851 ABC transporter, permease MID00_06940 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06940 IPR003593 AAA+ ATPase domain MID00_06940 IPR003439 ABC transporter-like MID00_06940 IPR017871 ABC transporter, conserved site MID00_06940 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_06945 IPR020845 AMP-binding, conserved site MID00_06945 IPR000873 AMP-dependent synthetase/ligase MID00_06945 IPR042099 AMP-dependent synthetase-like superfamily MID00_06955 IPR005064 Bordetella uptake gene MID00_06955 IPR042100 Bordetella uptake gene, domain 1 MID00_06960 IPR001608 Alanine racemase, N-terminal MID00_06960 IPR011078 Pyridoxal phosphate homeostasis protein MID00_06960 IPR029066 PLP-binding barrel MID00_06965 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase MID00_06965 IPR033524 Leu/Phe/Val dehydrogenases active site MID00_06965 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal MID00_06965 IPR033922 NAD(P) binding domain of glutamate dehydrogenase MID00_06965 IPR036291 NAD(P)-binding domain superfamily MID00_06965 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain MID00_06965 IPR014362 Glutamate dehydrogenase MID00_06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_06970 IPR017871 ABC transporter, conserved site MID00_06970 IPR003439 ABC transporter-like MID00_06970 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type MID00_06970 IPR003593 AAA+ ATPase domain MID00_06975 IPR018313 Solute-binding protein family 3, conserved site MID00_06975 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_06975 IPR001320 Ionotropic glutamate receptor MID00_06975 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter MID00_06980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_06980 IPR035906 MetI-like superfamily MID00_06980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_06985 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_06985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_06985 IPR035906 MetI-like superfamily MID00_06990 IPR027473 L-asparaginase, C-terminal MID00_06990 IPR040919 Asparaginase/glutaminase, C-terminal MID00_06990 IPR027475 Asparaginase/glutaminase, active site 2 MID00_06990 IPR020827 Asparaginase/glutaminase, active site 1 MID00_06990 IPR006034 Asparaginase/glutaminase-like MID00_06990 IPR004550 L-asparaginase, type II MID00_06990 IPR036152 Asparaginase/glutaminase-like superfamily MID00_06990 IPR027474 L-asparaginase, N-terminal MID00_06990 IPR037152 L-asparaginase, N-terminal domain superfamily MID00_06995 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site MID00_06995 IPR006225 Pseudouridine synthase, RluC/RluD MID00_06995 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_06995 IPR006145 Pseudouridine synthase, RsuA/RluA MID00_06995 IPR002942 RNA-binding S4 domain MID00_07005 IPR011852 TRAP transporter solute receptor, TAXI family MID00_07015 IPR020456 Acylphosphatase MID00_07015 IPR001792 Acylphosphatase-like domain MID00_07015 IPR036046 Acylphosphatase-like domain superfamily MID00_07015 IPR017968 Acylphosphatase, conserved site MID00_07020 IPR029787 Nucleotide cyclase MID00_07020 IPR005330 MHYT domain MID00_07020 IPR000160 GGDEF domain MID00_07020 IPR035919 EAL domain superfamily MID00_07020 IPR001633 EAL domain MID00_07030 IPR001387 Cro/C1-type helix-turn-helix domain MID00_07030 IPR010982 Lambda repressor-like, DNA-binding domain superfamily MID00_07030 IPR013430 Toxin-antitoxin system, antidote protein, HigA MID00_07035 IPR003798 DNA recombination RmuC MID00_07045 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_07045 IPR006076 FAD dependent oxidoreductase MID00_07045 IPR023080 D-amino acid dehydrogenase DadA MID00_07050 IPR037414 Transcriptional activator protein LysR, PBP2 domain MID00_07050 IPR005119 LysR, substrate-binding MID00_07050 IPR000847 Transcription regulator HTH, LysR MID00_07050 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07050 IPR036390 Winged helix DNA-binding domain superfamily MID00_07055 IPR011711 GntR, C-terminal MID00_07055 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_07055 IPR000524 Transcription regulator HTH, GntR MID00_07055 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07055 IPR036390 Winged helix DNA-binding domain superfamily MID00_07060 IPR005064 Bordetella uptake gene MID00_07060 IPR042100 Bordetella uptake gene, domain 1 MID00_07065 IPR025110 AMP-binding enzyme, C-terminal domain MID00_07065 IPR020845 AMP-binding, conserved site MID00_07065 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC MID00_07065 IPR000873 AMP-dependent synthetase/ligase MID00_07065 IPR042099 AMP-dependent synthetase-like superfamily MID00_07075 IPR004681 TRAP transporter large membrane protein DctM MID00_07075 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_07085 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_07085 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_07090 IPR041492 Haloacid dehalogenase-like hydrolase MID00_07090 IPR006439 HAD hydrolase, subfamily IA MID00_07090 IPR036412 HAD-like superfamily MID00_07090 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MID00_07090 IPR023214 HAD superfamily MID00_07110 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07110 IPR003593 AAA+ ATPase domain MID00_07110 IPR003439 ABC transporter-like MID00_07110 IPR017871 ABC transporter, conserved site MID00_07110 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl MID00_07115 IPR003453 ABC transport permease subunit MlaE, Proteobacteria MID00_07115 IPR030802 ABC transporter permease MalE MID00_07125 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_07125 IPR004681 TRAP transporter large membrane protein DctM MID00_07145 IPR036390 Winged helix DNA-binding domain superfamily MID00_07145 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07145 IPR000847 Transcription regulator HTH, LysR MID00_07145 IPR020890 Transcription regulator HTH, HdfR MID00_07145 IPR005119 LysR, substrate-binding MID00_07155 IPR036390 Winged helix DNA-binding domain superfamily MID00_07155 IPR000847 Transcription regulator HTH, LysR MID00_07155 IPR005119 LysR, substrate-binding MID00_07155 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07160 IPR000120 Amidase MID00_07160 IPR020556 Amidase, conserved site MID00_07160 IPR023631 Amidase signature domain MID00_07160 IPR036928 Amidase signature (AS) superfamily MID00_07160 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit MID00_07175 IPR031168 TrmE-type guanine nucleotide-binding domain MID00_07175 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07175 IPR025867 MnmE, helical domain MID00_07175 IPR027368 tRNA modification GTPase MnmE domain 2 MID00_07175 IPR004520 tRNA modification GTPase MnmE MID00_07175 IPR006073 GTP binding domain MID00_07175 IPR018948 GTP-binding protein TrmE, N-terminal MID00_07175 IPR005225 Small GTP-binding protein domain MID00_07175 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 MID00_07190 IPR007621 TPM domain MID00_07200 IPR001650 Helicase, C-terminal MID00_07200 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MID00_07200 IPR028622 ATP-dependent RNA helicase RhlE MID00_07200 IPR011545 DEAD/DEAH box helicase domain MID00_07200 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_07200 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07200 IPR014014 RNA helicase, DEAD-box type, Q motif MID00_07205 IPR001123 Amino acid exporter protein, LeuE-type MID00_07210 IPR004548 Peptide chain release factor 3 MID00_07210 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07210 IPR031157 Tr-type G domain, conserved site MID00_07210 IPR009000 Translation protein, beta-barrel domain superfamily MID00_07210 IPR000795 Transcription factor, GTP-binding domain MID00_07210 IPR005225 Small GTP-binding protein domain MID00_07210 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_07210 IPR035647 EF-G domain III/V-like MID00_07210 IPR032090 Peptide chain release factor 3, C-terminal MID00_07210 IPR041732 Peptide chain release factor 3, GTP-binding domain MID00_07210 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily MID00_07220 IPR009078 Ferritin-like superfamily MID00_07220 IPR008331 Ferritin/DPS protein domain MID00_07220 IPR009040 Ferritin-like diiron domain MID00_07220 IPR012347 Ferritin-like MID00_07220 IPR002024 Bacterioferritin MID00_07230 IPR036390 Winged helix DNA-binding domain superfamily MID00_07230 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain MID00_07230 IPR005119 LysR, substrate-binding MID00_07230 IPR000847 Transcription regulator HTH, LysR MID00_07230 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07235 IPR000868 Isochorismatase-like MID00_07235 IPR036380 Isochorismatase-like superfamily MID00_07240 IPR026289 Solute binding protein, TakP-like MID00_07240 IPR041722 Alpha-keto acid binding periplasmic protein MID00_07240 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_07240 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_07250 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_07250 IPR004681 TRAP transporter large membrane protein DctM MID00_07250 IPR007387 TRAP transporter, small membrane protein DctQ MID00_07255 IPR023606 CoA-transferase family III domain superfamily MID00_07255 IPR003673 CoA-transferase family III MID00_07260 IPR000891 Pyruvate carboxyltransferase MID00_07260 IPR013785 Aldolase-type TIM barrel MID00_07265 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain MID00_07265 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 MID00_07265 IPR004430 3-isopropylmalate dehydratase, large subunit MID00_07265 IPR036008 Aconitase, iron-sulfur domain MID00_07265 IPR033941 3-Isopropylmalate dehydratase, catalytic domain MID00_07265 IPR018136 Aconitase family, 4Fe-4S cluster binding site MID00_07270 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain MID00_07270 IPR033940 3-isopropylmalate dehydratase, swivel domain MID00_07270 IPR004431 3-isopropylmalate dehydratase, small subunit MID00_07270 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MID00_07275 IPR000394 RNA polymerase sigma factor 54 MID00_07275 IPR007046 RNA polymerase sigma factor 54, core-binding domain MID00_07275 IPR007634 RNA polymerase sigma factor 54, DNA-binding MID00_07275 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily MID00_07290 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site MID00_07290 IPR039371 LeuA, N-terminal catalytic TIM barrel domain MID00_07290 IPR013785 Aldolase-type TIM barrel MID00_07290 IPR005668 2-isopropylmalate synthase MID00_07290 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily MID00_07290 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain MID00_07290 IPR000891 Pyruvate carboxyltransferase MID00_07315 IPR008909 DALR anticodon binding MID00_07315 IPR035684 Arginyl-tRNA synthetase, catalytic core domain MID00_07315 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily MID00_07315 IPR005148 Arginyl tRNA synthetase N-terminal domain MID00_07315 IPR001278 Arginine-tRNA ligase MID00_07315 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_07315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_07315 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding MID00_07325 IPR017937 Thioredoxin, conserved site MID00_07325 IPR036249 Thioredoxin-like superfamily MID00_07325 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL MID00_07325 IPR001853 DSBA-like thioredoxin domain MID00_07325 IPR013766 Thioredoxin domain MID00_07335 IPR005119 LysR, substrate-binding MID00_07335 IPR000847 Transcription regulator HTH, LysR MID00_07335 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07335 IPR036390 Winged helix DNA-binding domain superfamily MID00_07340 IPR015424 Pyridoxal phosphate-dependent transferase MID00_07340 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme MID00_07340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_07340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_07340 IPR006233 Cystathionine beta-lyase, bacterial MID00_07350 IPR011789 Cu(I)-responsive transcriptional regulator MID00_07350 IPR009061 Putative DNA-binding domain superfamily MID00_07350 IPR000551 MerR-type HTH domain MID00_07350 IPR015358 Transcription regulator MerR, DNA binding MID00_07355 IPR006089 Acyl-CoA dehydrogenase, conserved site MID00_07355 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_07355 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_07355 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_07355 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_07355 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_07355 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_07360 IPR010452 Isocitrate dehydrogenase kinasephosphatase MID00_07365 IPR020617 Thiolase, C-terminal MID00_07365 IPR020615 Thiolase, acyl-enzyme intermediate active site MID00_07365 IPR016039 Thiolase-like MID00_07365 IPR002155 Thiolase MID00_07365 IPR020616 Thiolase, N-terminal MID00_07365 IPR020613 Thiolase, conserved site MID00_07365 IPR020610 Thiolase, active site MID00_07370 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal MID00_07370 IPR029045 ClpP/crotonase-like domain superfamily MID00_07370 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal MID00_07370 IPR034733 Acetyl-CoA carboxylase MID00_07375 IPR011054 Rudiment single hybrid motif MID00_07375 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain MID00_07375 IPR016185 Pre-ATP-grasp domain superfamily MID00_07375 IPR011764 Biotin carboxylation domain MID00_07375 IPR011053 Single hybrid motif MID00_07375 IPR000089 Biotin/lipoyl attachment MID00_07375 IPR001882 Biotin-binding site MID00_07375 IPR005482 Biotin carboxylase, C-terminal MID00_07375 IPR011761 ATP-grasp fold MID00_07375 IPR005481 Biotin carboxylase-like, N-terminal domain MID00_07380 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain MID00_07380 IPR000924 Glutamyl/glutaminyl-tRNA synthetase MID00_07380 IPR022380 Glutamyl-Q tRNA(Asp) synthetase MID00_07380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_07385 IPR007456 Smg MID00_07395 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MID00_07395 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MID00_07395 IPR013497 DNA topoisomerase, type IA, central MID00_07395 IPR023406 DNA topoisomerase, type IA, active site MID00_07395 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MID00_07395 IPR000380 DNA topoisomerase, type IA MID00_07395 IPR003601 DNA topoisomerase, type IA, domain 2 MID00_07395 IPR023405 DNA topoisomerase, type IA, core domain MID00_07395 IPR003602 DNA topoisomerase, type IA, DNA-binding domain MID00_07395 IPR005738 DNA topoisomerase III MID00_07395 IPR006171 TOPRIM domain MID00_07395 IPR034144 DNA topoisomerase 3-like, TOPRIM domain MID00_07405 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_07405 IPR004681 TRAP transporter large membrane protein DctM MID00_07415 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_07415 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_07415 IPR004682 TRAP transporter solute receptor, DctP family MID00_07420 IPR012000 Thiamine pyrophosphate enzyme, central domain MID00_07420 IPR029061 Thiamin diphosphate-binding fold MID00_07420 IPR029035 DHS-like NAD/FAD-binding domain superfamily MID00_07420 IPR012846 Acetolactate synthase, large subunit, biosynthetic MID00_07420 IPR039368 Acetolactate synthase large subunit, TPP binding domain MID00_07420 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain MID00_07420 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding MID00_07420 IPR000399 TPP-binding enzyme, conserved site MID00_07435 IPR004681 TRAP transporter large membrane protein DctM MID00_07435 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_07440 IPR004682 TRAP transporter solute receptor, DctP family MID00_07440 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_07440 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_07450 IPR035994 Nucleoside phosphorylase superfamily MID00_07450 IPR000845 Nucleoside phosphorylase domain MID00_07450 IPR011271 AMP nucleosidase MID00_07450 IPR018953 AMP nucleoside phosphorylase, N-terminal MID00_07450 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily MID00_07455 IPR011076 Malate synthase-like superfamily MID00_07455 IPR023310 Malate synthase G, beta sub-domain MID00_07455 IPR001465 Malate synthase MID00_07455 IPR006253 Malate synthase G MID00_07465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_07465 IPR035906 MetI-like superfamily MID00_07465 IPR011867 Molybdate ABC transporter, permease protein MID00_07470 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal MID00_07470 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal MID00_07470 IPR013785 Aldolase-type TIM barrel MID00_07470 IPR006242 Putative pyrophosphorylase ModD MID00_07470 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD MID00_07470 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily MID00_07470 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal MID00_07480 IPR020449 Transcription regulator HTH, AraC- type MID00_07480 IPR009057 Homeobox-like domain superfamily MID00_07480 IPR018060 DNA binding HTH domain, AraC-type MID00_07480 IPR018062 HTH domain AraC-type, conserved site MID00_07480 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like MID00_07490 IPR005025 NADPH-dependent FMN reductase-like MID00_07490 IPR029039 Flavoprotein-like superfamily MID00_07490 IPR019912 FMN reductase, MsuE-like MID00_07495 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent MID00_07495 IPR011251 Luciferase-like domain MID00_07495 IPR036661 Luciferase-like domain superfamily MID00_07515 IPR006120 Resolvase, HTH domain MID00_07515 IPR006119 Resolvase, N-terminal catalytic domain MID00_07515 IPR006118 Recombinase, conserved site MID00_07515 IPR009057 Homeobox-like domain superfamily MID00_07515 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily MID00_07525 IPR004872 Lipoprotein NlpA family MID00_07530 IPR011251 Luciferase-like domain MID00_07530 IPR036661 Luciferase-like domain superfamily MID00_07530 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A MID00_07535 IPR004872 Lipoprotein NlpA family MID00_07540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_07540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_07540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_07540 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain MID00_07540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_07540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_07545 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain MID00_07545 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_07545 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_07545 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_07545 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_07550 IPR035906 MetI-like superfamily MID00_07550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_07555 IPR003593 AAA+ ATPase domain MID00_07555 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07555 IPR018449 NIL domain MID00_07555 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain MID00_07555 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal MID00_07555 IPR017871 ABC transporter, conserved site MID00_07555 IPR003439 ABC transporter-like MID00_07555 IPR026253 Methionine import ATP-binding protein MetN MID00_07560 IPR004872 Lipoprotein NlpA family MID00_07565 IPR004872 Lipoprotein NlpA family MID00_07570 IPR004636 Acetylornithine/Succinylornithine transaminase family MID00_07570 IPR005814 Aminotransferase class-III MID00_07570 IPR015424 Pyridoxal phosphate-dependent transferase MID00_07570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_07570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_07575 IPR001126 UmuC domain MID00_07575 IPR022880 DNA polymerase IV MID00_07575 IPR017961 DNA polymerase, Y-family, little finger domain MID00_07575 IPR036775 DNA polymerase, Y-family, little finger domain superfamily MID00_07580 IPR030678 Peptide/nickel binding protein, MppA-type MID00_07580 IPR039424 Solute-binding protein family 5 MID00_07580 IPR000914 Solute-binding protein family 5 domain MID00_07585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_07585 IPR035906 MetI-like superfamily MID00_07590 IPR025966 Oligopeptide transport permease C-like, N-terminal domain MID00_07590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_07590 IPR035906 MetI-like superfamily MID00_07595 IPR003593 AAA+ ATPase domain MID00_07595 IPR003439 ABC transporter-like MID00_07595 IPR017871 ABC transporter, conserved site MID00_07595 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal MID00_07595 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07600 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal MID00_07600 IPR017871 ABC transporter, conserved site MID00_07600 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07600 IPR003593 AAA+ ATPase domain MID00_07600 IPR003439 ABC transporter-like MID00_07605 IPR039425 RNA polymerase sigma-70 like MID00_07605 IPR014284 RNA polymerase sigma-70 like domain MID00_07605 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site MID00_07605 IPR007627 RNA polymerase sigma-70 region 2 MID00_07605 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 MID00_07605 IPR013325 RNA polymerase sigma factor, region 2 MID00_07605 IPR013324 RNA polymerase sigma factor, region 3/4-like MID00_07605 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07615 IPR010105 TonB-dependent siderophore receptor MID00_07615 IPR010917 TonB-dependent receptor, conserved site MID00_07615 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_07615 IPR012910 TonB-dependent receptor, plug domain MID00_07615 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_07615 IPR039423 TonB-dependent receptor-like MID00_07615 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_07620 IPR009010 Aspartate decarboxylase-like domain superfamily MID00_07620 IPR003190 Aspartate decarboxylase MID00_07630 IPR003439 ABC transporter-like MID00_07630 IPR003593 AAA+ ATPase domain MID00_07630 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type MID00_07630 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07630 IPR017871 ABC transporter, conserved site MID00_07635 IPR002563 Flavin reductase like domain MID00_07635 IPR012349 FMN-binding split barrel MID00_07640 IPR037923 Transcription regulator HTH-like MID00_07640 IPR018060 DNA binding HTH domain, AraC-type MID00_07640 IPR018062 HTH domain AraC-type, conserved site MID00_07640 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like MID00_07640 IPR009057 Homeobox-like domain superfamily MID00_07650 IPR036390 Winged helix DNA-binding domain superfamily MID00_07650 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07650 IPR012349 FMN-binding split barrel MID00_07650 IPR002563 Flavin reductase like domain MID00_07660 IPR036291 NAD(P)-binding domain superfamily MID00_07660 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_07660 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_07680 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_07680 IPR004681 TRAP transporter large membrane protein DctM MID00_07705 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_07705 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_07705 IPR036291 NAD(P)-binding domain superfamily MID00_07705 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase MID00_07720 IPR042099 AMP-dependent synthetase-like superfamily MID00_07720 IPR020845 AMP-binding, conserved site MID00_07720 IPR025110 AMP-binding enzyme, C-terminal domain MID00_07720 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC MID00_07720 IPR000873 AMP-dependent synthetase/ligase MID00_07725 IPR032710 NTF2-like domain superfamily MID00_07725 IPR017641 Benzoate 1,2-dioxygenase, small subunit MID00_07725 IPR000391 Ring-hydroxylating dioxygenase beta subunit MID00_07730 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_07730 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_07730 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit MID00_07730 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain MID00_07730 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site MID00_07730 IPR017639 Benzoate 1,2-dioxygenase, large subunit MID00_07735 IPR012675 Beta-grasp domain superfamily MID00_07735 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_07735 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_07735 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_07735 IPR017938 Riboflavin synthase-like beta-barrel MID00_07735 IPR000951 Phthalate dioxygenase reductase MID00_07735 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_07735 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_07735 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_07735 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_07735 IPR039003 Carnitine monooxygenase reductase subunit MID00_07740 IPR007325 Kynurenine formamidase/cyclase-like MID00_07740 IPR037175 Kynurenine formamidase superfamily MID00_07745 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_07745 IPR000132 Nitrilase/cyanide hydratase, conserved site MID00_07745 IPR003010 Carbon-nitrogen hydrolase MID00_07750 IPR011234 Fumarylacetoacetase-like, C-terminal MID00_07750 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily MID00_07755 IPR014710 RmlC-like jelly roll fold MID00_07755 IPR011051 RmlC-like cupin domain superfamily MID00_07755 IPR013096 Cupin 2, conserved barrel MID00_07760 IPR002938 FAD-binding domain MID00_07760 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_07765 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site MID00_07765 IPR029069 HotDog domain superfamily MID00_07770 IPR023187 Transcriptional regulator MarR-type, conserved site MID00_07770 IPR036390 Winged helix DNA-binding domain superfamily MID00_07770 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07770 IPR000835 MarR-type HTH domain MID00_07785 IPR000835 MarR-type HTH domain MID00_07785 IPR036390 Winged helix DNA-binding domain superfamily MID00_07785 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07785 IPR023187 Transcriptional regulator MarR-type, conserved site MID00_07785 IPR012712 HTH-type transcriptional regulator HpaR/FarR MID00_07795 IPR000917 Sulfatase, N-terminal MID00_07795 IPR032506 Domain of unknown function DUF4976 MID00_07795 IPR017850 Alkaline-phosphatase-like, core domain superfamily MID00_07820 IPR005064 Bordetella uptake gene MID00_07820 IPR042100 Bordetella uptake gene, domain 1 MID00_07825 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MID00_07825 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07825 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MID00_07825 IPR036627 CobW-like, C-terminal domain superfamily MID00_07830 IPR039556 ICL/PEPM domain MID00_07830 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_07830 IPR012649 Phosphonopyruvate hydrolase MID00_07830 IPR040442 Pyruvate kinase-like domain superfamily MID00_07835 IPR004839 Aminotransferase, class I/classII MID00_07835 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site MID00_07835 IPR015424 Pyridoxal phosphate-dependent transferase MID00_07835 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_07835 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_07845 IPR013611 Transport-associated OB, type 2 MID00_07845 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07845 IPR015853 ABC transporter, ferric cation import, FbpC MID00_07845 IPR017871 ABC transporter, conserved site MID00_07845 IPR003593 AAA+ ATPase domain MID00_07845 IPR008995 Molybdate/tungstate binding, C-terminal MID00_07845 IPR003439 ABC transporter-like MID00_07855 IPR036390 Winged helix DNA-binding domain superfamily MID00_07855 IPR005119 LysR, substrate-binding MID00_07855 IPR000847 Transcription regulator HTH, LysR MID00_07855 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07855 IPR020890 Transcription regulator HTH, HdfR MID00_07860 IPR000620 EamA domain MID00_07870 IPR005064 Bordetella uptake gene MID00_07870 IPR042100 Bordetella uptake gene, domain 1 MID00_07875 IPR026286 Maleate isomerase/Arylmalonate decarboxylase MID00_07875 IPR011060 Ribulose-phosphate binding barrel MID00_07880 IPR029045 ClpP/crotonase-like domain superfamily MID00_07880 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_07880 IPR001753 Enoyl-CoA hydratase/isomerase MID00_07885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_07885 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07885 IPR000524 Transcription regulator HTH, GntR MID00_07885 IPR004839 Aminotransferase, class I/classII MID00_07885 IPR015424 Pyridoxal phosphate-dependent transferase MID00_07885 IPR036390 Winged helix DNA-binding domain superfamily MID00_07885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_07890 IPR000089 Biotin/lipoyl attachment MID00_07890 IPR000073 Alpha/beta hydrolase fold-1 MID00_07890 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site MID00_07890 IPR029058 Alpha/Beta hydrolase fold MID00_07890 IPR011053 Single hybrid motif MID00_07900 IPR020845 AMP-binding, conserved site MID00_07900 IPR025110 AMP-binding enzyme, C-terminal domain MID00_07900 IPR000873 AMP-dependent synthetase/ligase MID00_07905 IPR003593 AAA+ ATPase domain MID00_07905 IPR017871 ABC transporter, conserved site MID00_07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07905 IPR003439 ABC transporter-like MID00_07905 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_07910 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal MID00_07910 IPR001851 ABC transporter, permease MID00_07915 IPR001851 ABC transporter, permease MID00_07925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_07925 IPR015424 Pyridoxal phosphate-dependent transferase MID00_07925 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site MID00_07925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_07925 IPR004839 Aminotransferase, class I/classII MID00_07930 IPR002933 Peptidase M20 MID00_07930 IPR010169 Acetylornithine deacetylase ArgE MID00_07930 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site MID00_07930 IPR011650 Peptidase M20, dimerisation domain MID00_07930 IPR036264 Bacterial exopeptidase dimerisation domain MID00_07935 IPR036259 MFS transporter superfamily MID00_07935 IPR020846 Major facilitator superfamily domain MID00_07935 IPR011701 Major facilitator superfamily MID00_07940 IPR002299 Porin, Neisseria sp. type MID00_07940 IPR001702 Porin, Gram-negative type MID00_07940 IPR023614 Porin domain superfamily MID00_07940 IPR033900 Porin domain, Gram-negative type MID00_07945 IPR011711 GntR, C-terminal MID00_07945 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_07945 IPR000524 Transcription regulator HTH, GntR MID00_07945 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_07945 IPR036390 Winged helix DNA-binding domain superfamily MID00_07960 IPR036986 RNA-binding S4 domain superfamily MID00_07960 IPR002942 RNA-binding S4 domain MID00_07960 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site MID00_07960 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F MID00_07960 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_07960 IPR006145 Pseudouridine synthase, RsuA/RluA MID00_07960 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain MID00_07965 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 MID00_07965 IPR001241 DNA topoisomerase, type IIA MID00_07965 IPR018522 DNA topoisomerase, type IIA, conserved site MID00_07965 IPR006171 TOPRIM domain MID00_07965 IPR034160 DNA gyrase subunit B, TOPRIM domain MID00_07965 IPR002288 DNA gyrase B subunit, C-terminal MID00_07965 IPR011557 DNA gyrase, subunit B MID00_07965 IPR041423 DNA gyrase subunit B insert domain MID00_07965 IPR003594 Histidine kinase/HSP90-like ATPase MID00_07965 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_07965 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_07965 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_07965 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal MID00_07965 IPR013760 DNA topoisomerase, type IIA-like domain superfamily MID00_07970 IPR001001 DNA polymerase III, beta sliding clamp MID00_07970 IPR022637 DNA polymerase III, beta sliding clamp, central MID00_07970 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal MID00_07970 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal MID00_07975 IPR010921 Trp repressor/replication initiator MID00_07975 IPR003593 AAA+ ATPase domain MID00_07975 IPR038454 DnaA, N-terminal domain superfamily MID00_07975 IPR018312 Chromosomal replication control, initiator DnaA, conserved site MID00_07975 IPR013317 Chromosomal replication initiator protein DnaA MID00_07975 IPR020591 Chromosomal replication control, initiator DnaA-like MID00_07975 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_07975 IPR001957 Chromosomal replication control, initiator DnaA MID00_07975 IPR024633 DnaA N-terminal domain MID00_07975 IPR013159 Chromosomal replication initiator, DnaA C-terminal MID00_07980 IPR020939 Ribosomal protein L34, conserved site MID00_07980 IPR000271 Ribosomal protein L34 MID00_07985 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_07985 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_07985 IPR000100 Ribonuclease P MID00_07985 IPR020539 Ribonuclease P, conserved site MID00_07990 IPR002696 Putative membrane protein insertion efficiency factor MID00_07995 IPR019998 Membrane insertase YidC MID00_07995 IPR028055 Membrane insertase YidC/Oxa1, C-terminal MID00_07995 IPR028053 Membrane insertase YidC, N-terminal MID00_07995 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 MID00_07995 IPR038210 Membrane insertase YidC, periplasmic domain MID00_07995 IPR038221 YidC, periplasmic domain superfamily MID00_08000 IPR040333 Catalase, clade 3 MID00_08000 IPR018028 Catalase, mono-functional, haem-containing MID00_08000 IPR024708 Catalase active site MID00_08000 IPR002226 Catalase haem-binding site MID00_08000 IPR011614 Catalase core domain MID00_08000 IPR037060 Catalase core domain superfamily MID00_08000 IPR020835 Catalase superfamily MID00_08000 IPR010582 Catalase immune-responsive domain MID00_08000 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 MID00_08015 IPR023401 Ornithine cyclodeaminase, N-terminal MID00_08015 IPR003462 Ornithine cyclodeaminase/mu-crystallin MID00_08015 IPR036291 NAD(P)-binding domain superfamily MID00_08020 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_08020 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_08025 IPR010169 Acetylornithine deacetylase ArgE MID00_08025 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site MID00_08025 IPR036264 Bacterial exopeptidase dimerisation domain MID00_08025 IPR002933 Peptidase M20 MID00_08025 IPR011650 Peptidase M20, dimerisation domain MID00_08030 IPR010982 Lambda repressor-like, DNA-binding domain superfamily MID00_08030 IPR014710 RmlC-like jelly roll fold MID00_08030 IPR011051 RmlC-like cupin domain superfamily MID00_08030 IPR001387 Cro/C1-type helix-turn-helix domain MID00_08030 IPR013096 Cupin 2, conserved barrel MID00_08035 IPR027368 tRNA modification GTPase MnmE domain 2 MID00_08035 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 MID00_08035 IPR005225 Small GTP-binding protein domain MID00_08035 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08035 IPR025867 MnmE, helical domain MID00_08035 IPR004520 tRNA modification GTPase MnmE MID00_08035 IPR006073 GTP binding domain MID00_08035 IPR018948 GTP-binding protein TrmE, N-terminal MID00_08035 IPR031168 TrmE-type guanine nucleotide-binding domain MID00_08070 IPR003719 Phenazine biosynthesis PhzF protein MID00_08080 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_08080 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site MID00_08080 IPR005789 Threonine dehydratase, catabolic MID00_08080 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_08080 IPR002912 ACT domain MID00_08090 IPR033177 Phosphatidylserine decarboxylase MID00_08090 IPR003817 Phosphatidylserine decarboxylase-related MID00_08090 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 MID00_08095 IPR012292 Globin/Protoglobin MID00_08095 IPR039435 Diguanylate cyclase DosC, globin sensor domain MID00_08095 IPR000160 GGDEF domain MID00_08095 IPR009050 Globin-like superfamily MID00_08095 IPR029787 Nucleotide cyclase MID00_08100 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type MID00_08100 IPR029052 Metallo-dependent phosphatase-like MID00_08100 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase MID00_08100 IPR041780 PrpE-like, metallophosphatase domain MID00_08100 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE MID00_08110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_08110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_08110 IPR015424 Pyridoxal phosphate-dependent transferase MID00_08110 IPR004839 Aminotransferase, class I/classII MID00_08115 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_08115 IPR026904 GidA associated domain 3 MID00_08115 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG MID00_08115 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related MID00_08115 IPR020595 MnmG-related, conserved site MID00_08120 IPR003682 rRNA small subunit methyltransferase G MID00_08120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_08125 IPR025669 AAA domain MID00_08125 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08130 IPR036086 ParB/Sulfiredoxin superfamily MID00_08130 IPR004437 ParB/RepB/Spo0J partition protein MID00_08130 IPR041468 ParB/Spo0J, HTH domain MID00_08130 IPR003115 ParB/Sulfiredoxin MID00_08155 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal MID00_08155 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle MID00_08155 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MID00_08155 IPR009000 Translation protein, beta-barrel domain superfamily MID00_08155 IPR005225 Small GTP-binding protein domain MID00_08155 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08155 IPR031157 Tr-type G domain, conserved site MID00_08155 IPR033720 Elongation factor Tu, domain 2 MID00_08155 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_08155 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain MID00_08155 IPR000795 Transcription factor, GTP-binding domain MID00_08170 IPR008991 Translation protein SH3-like domain superfamily MID00_08170 IPR006645 NusG, N-terminal MID00_08170 IPR001062 Transcription antitermination protein, NusG MID00_08170 IPR014722 Ribosomal protein L2, domain 2 MID00_08170 IPR036735 NusG, N-terminal domain superfamily MID00_08170 IPR005824 KOW MID00_08170 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site MID00_08175 IPR020784 Ribosomal protein L11, N-terminal MID00_08175 IPR020785 Ribosomal protein L11, conserved site MID00_08175 IPR036769 Ribosomal protein L11, C-terminal domain superfamily MID00_08175 IPR020783 Ribosomal protein L11, C-terminal MID00_08175 IPR006519 Ribosomal protein L11, bacterial-type MID00_08175 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily MID00_08175 IPR000911 Ribosomal protein L11/L12 MID00_08180 IPR005878 Ribosomal protein L1, bacterial-type MID00_08180 IPR002143 Ribosomal protein L1 MID00_08180 IPR023674 Ribosomal protein L1-like MID00_08180 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein MID00_08180 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich MID00_08180 IPR023673 Ribosomal protein L1, conserved site MID00_08185 IPR022973 Ribosomal protein L10 MID00_08185 IPR002363 Ribosomal protein L10, eubacterial, conserved site MID00_08185 IPR001790 Ribosomal protein L10P MID00_08190 IPR013823 Ribosomal protein L7/L12, C-terminal MID00_08190 IPR000206 Ribosomal protein L7/L12 MID00_08190 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MID00_08190 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily MID00_08190 IPR008932 Ribosomal protein L7/L12, oligomerisation MID00_08195 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain MID00_08195 IPR015712 DNA-directed RNA polymerase, subunit 2 MID00_08195 IPR037034 RNA polymerase Rpb2, domain 2 superfamily MID00_08195 IPR007644 RNA polymerase, beta subunit, protrusion MID00_08195 IPR007645 RNA polymerase Rpb2, domain 3 MID00_08195 IPR007642 RNA polymerase Rpb2, domain 2 MID00_08195 IPR014724 RNA polymerase Rpb2, OB-fold MID00_08195 IPR007641 RNA polymerase Rpb2, domain 7 MID00_08195 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain MID00_08195 IPR007121 RNA polymerase, beta subunit, conserved site MID00_08195 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type MID00_08195 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily MID00_08200 IPR012754 DNA-directed RNA polymerase, subunit beta-prime MID00_08200 IPR000722 RNA polymerase, alpha subunit MID00_08200 IPR006592 RNA polymerase, N-terminal MID00_08200 IPR007080 RNA polymerase Rpb1, domain 1 MID00_08200 IPR007066 RNA polymerase Rpb1, domain 3 MID00_08200 IPR042102 RNA polymerase Rpb1, domain 3 superfamily MID00_08200 IPR007083 RNA polymerase Rpb1, domain 4 MID00_08200 IPR007081 RNA polymerase Rpb1, domain 5 MID00_08200 IPR038120 RNA polymerase Rpb1, funnel domain superfamily MID00_08205 IPR008972 Cupredoxin MID00_08205 IPR028871 Blue (type 1) copper protein, binding site MID00_08205 IPR000923 Blue (type 1) copper domain MID00_08205 IPR014068 Azurin MID00_08220 IPR006290 Heavy metal sensor kinase MID00_08220 IPR003660 HAMP domain MID00_08220 IPR003594 Histidine kinase/HSP90-like ATPase MID00_08220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_08220 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_08220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_08220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_08220 IPR005467 Histidine kinase domain MID00_08230 IPR016032 Signal transduction response regulator, C-terminal effector MID00_08230 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_08230 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_08230 IPR039420 Transcriptional regulatory protein WalR-like MID00_08230 IPR001789 Signal transduction response regulator, receiver domain MID00_08230 IPR011006 CheY-like superfamily MID00_08235 IPR005679 Ribosomal protein S12, bacterial-type MID00_08235 IPR006032 Ribosomal protein S12/S23 MID00_08235 IPR012340 Nucleic acid-binding, OB-fold MID00_08240 IPR005717 Ribosomal protein S7, bacterial/organellar-type MID00_08240 IPR036823 Ribosomal protein S7 domain superfamily MID00_08240 IPR023798 Ribosomal protein S7 domain MID00_08240 IPR000235 Ribosomal protein S5/S7 MID00_08240 IPR020606 Ribosomal protein S7, conserved site MID00_08245 IPR041095 Elongation Factor G, domain II MID00_08245 IPR009022 Elongation factor G, domain III MID00_08245 IPR035647 EF-G domain III/V-like MID00_08245 IPR035649 EFG, domain V MID00_08245 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_08245 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_08245 IPR031157 Tr-type G domain, conserved site MID00_08245 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08245 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_08245 IPR005225 Small GTP-binding protein domain MID00_08245 IPR000795 Transcription factor, GTP-binding domain MID00_08245 IPR009000 Translation protein, beta-barrel domain superfamily MID00_08245 IPR004540 Translation elongation factor EFG/EF2 MID00_08245 IPR005517 Translation elongation factor EFG/EF2, domain IV MID00_08245 IPR000640 Elongation factor EFG, domain V-like MID00_08250 IPR009000 Translation protein, beta-barrel domain superfamily MID00_08250 IPR000795 Transcription factor, GTP-binding domain MID00_08250 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MID00_08250 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal MID00_08250 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08250 IPR031157 Tr-type G domain, conserved site MID00_08250 IPR033720 Elongation factor Tu, domain 2 MID00_08250 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_08250 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle MID00_08250 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain MID00_08250 IPR005225 Small GTP-binding protein domain MID00_08255 IPR027486 Ribosomal protein S10 domain MID00_08255 IPR036838 Ribosomal protein S10 domain superfamily MID00_08255 IPR018268 Ribosomal protein S10, conserved site MID00_08255 IPR001848 Ribosomal protein S10 MID00_08260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_08260 IPR035906 MetI-like superfamily MID00_08265 IPR000644 CBS domain MID00_08265 IPR003593 AAA+ ATPase domain MID00_08265 IPR003439 ABC transporter-like MID00_08265 IPR017871 ABC transporter, conserved site MID00_08265 IPR005892 Glycine betaine transport ATP-binding subunit MID00_08265 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08270 IPR009000 Translation protein, beta-barrel domain superfamily MID00_08270 IPR019927 Ribosomal protein L3, bacterial/organelle-type MID00_08270 IPR019926 Ribosomal protein L3, conserved site MID00_08270 IPR000597 Ribosomal protein L3 MID00_08275 IPR023574 Ribosomal protein L4 domain superfamily MID00_08275 IPR002136 Ribosomal protein L4/L1e MID00_08275 IPR013005 50S ribosomal protein uL4 MID00_08280 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily MID00_08280 IPR012678 Ribosomal protein L23/L15e core domain superfamily MID00_08280 IPR013025 Ribosomal protein L25/L23 MID00_08285 IPR022671 Ribosomal protein L2, conserved site MID00_08285 IPR022669 Ribosomal protein L2, C-terminal MID00_08285 IPR005880 Ribosomal protein L2, bacterial/organellar-type MID00_08285 IPR008991 Translation protein SH3-like domain superfamily MID00_08285 IPR002171 Ribosomal protein L2 MID00_08285 IPR014726 Ribosomal protein L2, domain 3 MID00_08285 IPR014722 Ribosomal protein L2, domain 2 MID00_08285 IPR022666 Ribosomal Proteins L2, RNA binding domain MID00_08285 IPR012340 Nucleic acid-binding, OB-fold MID00_08290 IPR023575 Ribosomal protein S19, superfamily MID00_08290 IPR020934 Ribosomal protein S19 conserved site MID00_08290 IPR005732 Ribosomal protein S19, bacterial-type MID00_08290 IPR002222 Ribosomal protein S19/S15 MID00_08295 IPR018260 Ribosomal protein L22/L17, conserved site MID00_08295 IPR001063 Ribosomal protein L22/L17 MID00_08295 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type MID00_08295 IPR036394 Ribosomal protein L22/L17 superfamily MID00_08300 IPR005704 Ribosomal protein S3, bacterial-type MID00_08300 IPR009019 K homology domain superfamily, prokaryotic type MID00_08300 IPR015946 K homology domain-like, alpha/beta MID00_08300 IPR004087 K Homology domain MID00_08300 IPR036419 Ribosomal protein S3, C-terminal domain superfamily MID00_08300 IPR018280 Ribosomal protein S3, conserved site MID00_08300 IPR001351 Ribosomal protein S3, C-terminal MID00_08300 IPR004044 K Homology domain, type 2 MID00_08305 IPR020798 Ribosomal protein L16, conserved site MID00_08305 IPR000114 Ribosomal protein L16 MID00_08305 IPR036920 Ribosomal protein L10e/L16 superfamily MID00_08305 IPR016180 Ribosomal protein L10e/L16 MID00_08310 IPR001854 Ribosomal protein L29/L35 MID00_08310 IPR036049 Ribosomal protein L29/L35 superfamily MID00_08310 IPR018254 Ribosomal protein L29, conserved site MID00_08315 IPR019984 30S ribosomal protein S17 MID00_08315 IPR019979 Ribosomal protein S17, conserved site MID00_08315 IPR012340 Nucleic acid-binding, OB-fold MID00_08315 IPR000266 Ribosomal protein S17/S11 MID00_08320 IPR032783 AraC-type transcription regulator, ligand-binding domain MID00_08320 IPR009057 Homeobox-like domain superfamily MID00_08320 IPR018060 DNA binding HTH domain, AraC-type MID00_08320 IPR018062 HTH domain AraC-type, conserved site MID00_08330 IPR006089 Acyl-CoA dehydrogenase, conserved site MID00_08330 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_08330 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_08330 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_08330 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_08330 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_08330 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_08335 IPR017871 ABC transporter, conserved site MID00_08335 IPR003593 AAA+ ATPase domain MID00_08335 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB MID00_08335 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08335 IPR003439 ABC transporter-like MID00_08345 IPR035906 MetI-like superfamily MID00_08345 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_08345 IPR005889 Nitrate transport permease MID00_08350 IPR006366 Uroporphyrin-III C-methyltransferase MID00_08350 IPR000878 Tetrapyrrole methylase MID00_08350 IPR019478 Sirohaem synthase, dimerisation domain MID00_08350 IPR035996 Tetrapyrrole methylase superfamily MID00_08350 IPR014777 Tetrapyrrole methylase, subdomain 1 MID00_08350 IPR014776 Tetrapyrrole methylase, subdomain 2 MID00_08350 IPR036291 NAD(P)-binding domain superfamily MID00_08350 IPR006367 Sirohaem synthase, N-terminal MID00_08350 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site MID00_08350 IPR012409 Sirohaem synthase MID00_08350 IPR028281 Siroheme synthase, central domain MID00_08355 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site MID00_08355 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily MID00_08355 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain MID00_08355 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain MID00_08355 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit MID00_08360 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_08360 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain MID00_08360 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding MID00_08360 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria MID00_08360 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_08360 IPR001094 Flavodoxin-like MID00_08360 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase MID00_08360 IPR008254 Flavodoxin/nitric oxide synthase MID00_08360 IPR017938 Riboflavin synthase-like beta-barrel MID00_08360 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_08360 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily MID00_08360 IPR029039 Flavoprotein-like superfamily MID00_08365 IPR020845 AMP-binding, conserved site MID00_08365 IPR000873 AMP-dependent synthetase/ligase MID00_08365 IPR025110 AMP-binding enzyme, C-terminal domain MID00_08365 IPR042099 AMP-dependent synthetase-like superfamily MID00_08380 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) MID00_08380 IPR042117 OMPP1/FadL/TodX superfamily MID00_08385 IPR029045 ClpP/crotonase-like domain superfamily MID00_08385 IPR012802 Fatty oxidation complex, alpha subunit FadJ MID00_08385 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_08385 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_08385 IPR001753 Enoyl-CoA hydratase/isomerase MID00_08385 IPR036291 NAD(P)-binding domain superfamily MID00_08385 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal MID00_08385 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding MID00_08385 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site MID00_08390 IPR016039 Thiolase-like MID00_08390 IPR020610 Thiolase, active site MID00_08390 IPR012805 Acetyl-CoA C-acyltransferase FadA MID00_08390 IPR020617 Thiolase, C-terminal MID00_08390 IPR020616 Thiolase, N-terminal MID00_08390 IPR020613 Thiolase, conserved site MID00_08390 IPR020615 Thiolase, acyl-enzyme intermediate active site MID00_08390 IPR002155 Thiolase MID00_08395 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_08395 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_08395 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_08395 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_08395 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type MID00_08395 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_08395 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_08405 IPR016161 Aldehyde/histidinol dehydrogenase MID00_08405 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_08405 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_08405 IPR015590 Aldehyde dehydrogenase domain MID00_08410 IPR003423 Outer membrane efflux protein MID00_08410 IPR010130 Type I secretion outer membrane protein, TolC MID00_08420 IPR003593 AAA+ ATPase domain MID00_08420 IPR011527 ABC transporter type 1, transmembrane domain MID00_08420 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_08420 IPR017871 ABC transporter, conserved site MID00_08420 IPR010132 ATPase, type I secretion system, HlyB MID00_08420 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08420 IPR005074 Peptidase C39, bacteriocin processing MID00_08420 IPR039395 Peptidase C39-like A MID00_08420 IPR039421 Type I protein exporter MID00_08420 IPR003439 ABC transporter-like MID00_08425 IPR006144 Secretion protein HlyD, conserved site MID00_08425 IPR010129 Type I secretion membrane fusion protein, HlyD family MID00_08455 IPR019972 Ribosomal protein L14P, conserved site MID00_08455 IPR036853 Ribosomal protein L14 superfamily MID00_08455 IPR000218 Ribosomal protein L14P MID00_08455 IPR005745 Ribosomal protein L14P, bacterial-type MID00_08460 IPR041988 Ribosomal Protein L26/L24, KOW domain MID00_08460 IPR008991 Translation protein SH3-like domain superfamily MID00_08460 IPR005825 Ribosomal protein L24/L26, conserved site MID00_08460 IPR014722 Ribosomal protein L2, domain 2 MID00_08460 IPR003256 Ribosomal protein L24 MID00_08465 IPR022803 Ribosomal protein L5 domain superfamily MID00_08465 IPR020929 Ribosomal protein L5, conserved site MID00_08465 IPR031309 Ribosomal protein L5, C-terminal MID00_08465 IPR020930 Ribosomal protein L5, bacterial-type MID00_08465 IPR002132 Ribosomal protein L5 MID00_08465 IPR031310 Ribosomal protein L5, N-terminal MID00_08470 IPR001209 Ribosomal protein S14 MID00_08470 IPR023036 Ribosomal protein S14, bacterial/plastid MID00_08475 IPR035987 Ribosomal protein S8 superfamily MID00_08475 IPR000630 Ribosomal protein S8 MID00_08480 IPR002358 Ribosomal protein L6, conserved site MID00_08480 IPR019906 Ribosomal protein L6, bacterial-type MID00_08480 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily MID00_08480 IPR020040 Ribosomal protein L6, alpha-beta domain MID00_08480 IPR000702 Ribosomal protein L6 MID00_08485 IPR005484 Ribosomal protein L18 MID00_08485 IPR004389 Ribosomal protein L18, bacterial-type MID00_08490 IPR018192 Ribosomal protein S5, N-terminal, conserved site MID00_08490 IPR000851 Ribosomal protein S5 MID00_08490 IPR005712 Ribosomal protein S5, bacterial-type MID00_08490 IPR005324 Ribosomal protein S5, C-terminal MID00_08490 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_08490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_08490 IPR013810 Ribosomal protein S5, N-terminal MID00_08495 IPR005996 Ribosomal protein L30, bacterial-type MID00_08495 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily MID00_08495 IPR018038 Ribosomal protein L30, conserved site MID00_08495 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain MID00_08500 IPR036227 Ribosomal L18e/L15P superfamily MID00_08500 IPR030878 Ribosomal protein L15 MID00_08500 IPR005749 Ribosomal protein L15, bacterial-type MID00_08500 IPR021131 Ribosomal protein L18e/L15P MID00_08505 IPR002208 SecY/SEC61-alpha family MID00_08505 IPR030659 SecY conserved site MID00_08505 IPR023201 SecY domain superfamily MID00_08505 IPR026593 Protein translocase subunit SecY MID00_08510 IPR012340 Nucleic acid-binding, OB-fold MID00_08510 IPR006196 RNA-binding domain, S1, IF1 type MID00_08510 IPR022967 RNA-binding domain, S1 MID00_08510 IPR004368 Translation initiation factor IF-1 MID00_08515 IPR000473 Ribosomal protein L36 MID00_08515 IPR035977 Ribosomal protein L36 superfamily MID00_08520 IPR010979 Ribosomal protein S13-like, H2TH MID00_08520 IPR001892 Ribosomal protein S13 MID00_08520 IPR019980 Ribosomal protein S13, bacterial-type MID00_08520 IPR018269 Ribosomal protein S13, conserved site MID00_08520 IPR027437 30s ribosomal protein S13, C-terminal MID00_08525 IPR018102 Ribosomal S11, conserved site MID00_08525 IPR036967 Ribosomal protein S11 superfamily MID00_08525 IPR001971 Ribosomal protein S11 MID00_08525 IPR019981 Ribosomal protein S11, bacterial-type MID00_08530 IPR036986 RNA-binding S4 domain superfamily MID00_08530 IPR002942 RNA-binding S4 domain MID00_08530 IPR018079 Ribosomal protein S4, conserved site MID00_08530 IPR001912 Ribosomal protein S4/S9, N-terminal MID00_08530 IPR022801 Ribosomal protein S4/S9 MID00_08530 IPR005709 Ribosomal protein S4, bacterial-type MID00_08535 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type MID00_08535 IPR011773 DNA-directed RNA polymerase, alpha subunit MID00_08535 IPR036603 RNA polymerase, RBP11-like subunit MID00_08535 IPR011260 RNA polymerase, alpha subunit, C-terminal MID00_08535 IPR036643 DNA-directed RNA polymerase, insert domain superfamily MID00_08535 IPR011262 DNA-directed RNA polymerase, insert domain MID00_08540 IPR036373 Ribosomal protein L17 superfamily MID00_08540 IPR000456 Ribosomal protein L17 MID00_08545 IPR019914 Pyrimidine monooxygenase RutA MID00_08545 IPR036661 Luciferase-like domain superfamily MID00_08545 IPR011251 Luciferase-like domain MID00_08555 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like MID00_08555 IPR009057 Homeobox-like domain superfamily MID00_08555 IPR018060 DNA binding HTH domain, AraC-type MID00_08555 IPR018062 HTH domain AraC-type, conserved site MID00_08560 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria MID00_08560 IPR004323 Divalent ion tolerance protein, CutA MID00_08560 IPR011322 Nitrogen regulatory PII-like, alpha/beta MID00_08560 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MID00_08565 IPR013766 Thioredoxin domain MID00_08565 IPR017937 Thioredoxin, conserved site MID00_08565 IPR036249 Thioredoxin-like superfamily MID00_08565 IPR022910 Thiol:disulphide interchange protein DsbD MID00_08565 IPR035671 DsbD gamma MID00_08565 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain MID00_08565 IPR003834 Cytochrome C biogenesis protein, transmembrane domain MID00_08565 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily MID00_08570 IPR013785 Aldolase-type TIM barrel MID00_08570 IPR001731 Delta-aminolevulinic acid dehydratase MID00_08570 IPR030656 Delta-aminolevulinic acid dehydratase, active site MID00_08575 IPR006073 GTP binding domain MID00_08575 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC MID00_08575 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08575 IPR030393 EngB-type guanine nucleotide-binding (G) domain MID00_08580 IPR009056 Cytochrome c-like domain MID00_08580 IPR036909 Cytochrome c-like domain superfamily MID00_08580 IPR008168 Cytochrome c, class IC MID00_08580 IPR024167 Cytochrome c4-like MID00_08585 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB MID00_08585 IPR007816 ResB-like domain MID00_08590 IPR017562 Cytochrome c-type biogenesis protein CcsA MID00_08590 IPR002541 Cytochrome c assembly protein MID00_08595 IPR013656 PAS fold-4 MID00_08595 IPR035965 PAS domain superfamily MID00_08595 IPR000014 PAS domain MID00_08595 IPR029787 Nucleotide cyclase MID00_08595 IPR000160 GGDEF domain MID00_08595 IPR001633 EAL domain MID00_08595 IPR035919 EAL domain superfamily MID00_08600 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal MID00_08600 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site MID00_08600 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal MID00_08600 IPR029066 PLP-binding barrel MID00_08600 IPR002986 Diaminopimelate decarboxylase, LysA MID00_08600 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal MID00_08600 IPR000183 Ornithine/DAP/Arg decarboxylase MID00_08610 IPR001460 Penicillin-binding protein, transpeptidase MID00_08610 IPR012338 Beta-lactamase/transpeptidase-like MID00_08610 IPR001264 Glycosyl transferase, family 51 MID00_08610 IPR023346 Lysozyme-like domain superfamily MID00_08610 IPR036950 Penicillin binding protein transglycosylase domain MID00_08610 IPR031376 Penicillin-binding protein, OB-like domain MID00_08615 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08615 IPR031322 Shikimate kinase/gluconokinase MID00_08615 IPR000623 Shikimate kinase/Threonine synthase-like 1 MID00_08615 IPR023000 Shikimate kinase, conserved site MID00_08620 IPR016037 3-dehydroquinate synthase AroB MID00_08620 IPR030963 3-dehydroquinate synthase family MID00_08620 IPR030960 3-dehydroquinate synthase domain MID00_08625 IPR006261 dNTP triphosphohydrolase MID00_08625 IPR023023 dNTP triphosphohydrolase, type 2 MID00_08625 IPR003607 HD/PDEase domain MID00_08625 IPR006674 HD domain MID00_08625 IPR026875 Phosphohydrolase-associated domain MID00_08630 IPR041102 UvrA, interaction domain MID00_08630 IPR041552 UvrA DNA-binding domain MID00_08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_08630 IPR017871 ABC transporter, conserved site MID00_08630 IPR003439 ABC transporter-like MID00_08630 IPR004602 UvrABC system subunit A MID00_08635 IPR011701 Major facilitator superfamily MID00_08635 IPR036259 MFS transporter superfamily MID00_08635 IPR020846 Major facilitator superfamily domain MID00_08640 IPR012340 Nucleic acid-binding, OB-fold MID00_08640 IPR000424 Primosome PriB/single-strand DNA-binding MID00_08640 IPR011344 Single-stranded DNA-binding protein MID00_08645 IPR036390 Winged helix DNA-binding domain superfamily MID00_08645 IPR011711 GntR, C-terminal MID00_08645 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_08645 IPR000524 Transcription regulator HTH, GntR MID00_08645 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_08650 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily MID00_08650 IPR011234 Fumarylacetoacetase-like, C-terminal MID00_08655 IPR005064 Bordetella uptake gene MID00_08655 IPR042100 Bordetella uptake gene, domain 1 MID00_08660 IPR006056 RidA family MID00_08660 IPR019897 RidA, conserved site MID00_08660 IPR035959 RutC-like superfamily MID00_08660 IPR006175 YjgF/YER057c/UK114 family MID00_08665 IPR011701 Major facilitator superfamily MID00_08665 IPR020846 Major facilitator superfamily domain MID00_08665 IPR036259 MFS transporter superfamily MID00_08675 IPR012347 Ferritin-like MID00_08675 IPR008331 Ferritin/DPS protein domain MID00_08675 IPR002024 Bacterioferritin MID00_08675 IPR009040 Ferritin-like diiron domain MID00_08675 IPR009078 Ferritin-like superfamily MID00_08680 IPR020846 Major facilitator superfamily domain MID00_08680 IPR011701 Major facilitator superfamily MID00_08680 IPR004812 Drug resistance transporter Bcr/CmlA subfamily MID00_08680 IPR036259 MFS transporter superfamily MID00_08680 IPR004734 Multidrug resistance protein MID00_08690 IPR000485 AsnC-type HTH domain MID00_08690 IPR011711 GntR, C-terminal MID00_08690 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_08690 IPR000524 Transcription regulator HTH, GntR MID00_08690 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_08690 IPR036390 Winged helix DNA-binding domain superfamily MID00_08705 IPR000101 Gamma-glutamyltranspeptidase MID00_08705 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_08715 IPR015590 Aldehyde dehydrogenase domain MID00_08715 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_08715 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_08715 IPR016161 Aldehyde/histidinol dehydrogenase MID00_08715 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_08715 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_08720 IPR038084 GlcG-like domain superfamily MID00_08720 IPR005624 Haem-degrading MID00_08725 IPR017938 Riboflavin synthase-like beta-barrel MID00_08725 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_08725 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_08725 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_08725 IPR012675 Beta-grasp domain superfamily MID00_08725 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_08725 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_08725 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_08725 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_08745 IPR017938 Riboflavin synthase-like beta-barrel MID00_08745 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_08745 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_08745 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F MID00_08745 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_08745 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_08745 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_08745 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_08745 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase MID00_08745 IPR012675 Beta-grasp domain superfamily MID00_08750 IPR036291 NAD(P)-binding domain superfamily MID00_08750 IPR003462 Ornithine cyclodeaminase/mu-crystallin MID00_08750 IPR023401 Ornithine cyclodeaminase, N-terminal MID00_08770 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain MID00_08770 IPR022712 Beta-Casp domain MID00_08770 IPR001279 Metallo-beta-lactamase MID00_08770 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_08775 IPR029021 Protein-tyrosine phosphatase-like MID00_08775 IPR026893 Tyrosine/serine-protein phosphatase IphP-type MID00_08775 IPR016130 Protein-tyrosine phosphatase, active site MID00_08775 IPR000387 Tyrosine specific protein phosphatases domain MID00_08780 IPR015424 Pyridoxal phosphate-dependent transferase MID00_08780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_08780 IPR004839 Aminotransferase, class I/classII MID00_08780 IPR000796 Aspartate/other aminotransferase MID00_08780 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site MID00_08780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_08785 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 MID00_08785 IPR005119 LysR, substrate-binding MID00_08785 IPR036390 Winged helix DNA-binding domain superfamily MID00_08785 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_08785 IPR000847 Transcription regulator HTH, LysR MID00_08790 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_08790 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_08790 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site MID00_08795 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_08795 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_08795 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_08795 IPR000971 Globin MID00_08795 IPR012292 Globin/Protoglobin MID00_08795 IPR023950 Flavohemoprotein MID00_08795 IPR009050 Globin-like superfamily MID00_08795 IPR017938 Riboflavin synthase-like beta-barrel MID00_08795 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_08800 IPR004812 Drug resistance transporter Bcr/CmlA subfamily MID00_08800 IPR011701 Major facilitator superfamily MID00_08800 IPR020846 Major facilitator superfamily domain MID00_08800 IPR036259 MFS transporter superfamily MID00_08805 IPR011789 Cu(I)-responsive transcriptional regulator MID00_08805 IPR009061 Putative DNA-binding domain superfamily MID00_08805 IPR000551 MerR-type HTH domain MID00_08815 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_08815 IPR036390 Winged helix DNA-binding domain superfamily MID00_08815 IPR000847 Transcription regulator HTH, LysR MID00_08815 IPR005119 LysR, substrate-binding MID00_08820 IPR036259 MFS transporter superfamily MID00_08820 IPR011701 Major facilitator superfamily MID00_08820 IPR020846 Major facilitator superfamily domain MID00_08835 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MID00_08835 IPR010248 Histidine utilization repressor MID00_08835 IPR000524 Transcription regulator HTH, GntR MID00_08835 IPR011663 UbiC transcription regulator-associated MID00_08835 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_08835 IPR036390 Winged helix DNA-binding domain superfamily MID00_08840 IPR023637 Urocanase MID00_08840 IPR035401 Urocanase, C-terminal domain MID00_08840 IPR038364 Urocanase, central domain superfamily MID00_08840 IPR023636 Urocanase conserved site MID00_08840 IPR035085 Urocanase, Rossmann-like domain MID00_08840 IPR036190 Urocanase superfamily MID00_08840 IPR035400 Urocanase, N-terminal domain MID00_08845 IPR024083 Fumarase/histidase, N-terminal MID00_08845 IPR001106 Aromatic amino acid lyase MID00_08845 IPR022313 Phenylalanine/histidine ammonia-lyases, active site MID00_08845 IPR008948 L-Aspartase-like MID00_08845 IPR005921 Histidine ammonia-lyase MID00_08855 IPR001525 C-5 cytosine methyltransferase MID00_08855 IPR018117 DNA methylase, C-5 cytosine-specific, active site MID00_08855 IPR001387 Cro/C1-type helix-turn-helix domain MID00_08855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_08855 IPR010982 Lambda repressor-like, DNA-binding domain superfamily MID00_08855 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site MID00_08865 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_08865 IPR005920 Imidazolonepropionase MID00_08865 IPR006680 Amidohydrolase-related MID00_08865 IPR032466 Metal-dependent hydrolase MID00_08875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_08875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_08875 IPR015424 Pyridoxal phosphate-dependent transferase MID00_08875 IPR004839 Aminotransferase, class I/classII MID00_08880 IPR000537 UbiA prenyltransferase family MID00_08880 IPR030470 UbiA prenyltransferase conserved site MID00_08880 IPR006370 4-hydroxybenzoate polyprenyltransferase-like MID00_08880 IPR039653 Prenyltransferase MID00_08900 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb MID00_08900 IPR004524 Aspartate-tRNA ligase, type 1 MID00_08900 IPR029351 GAD domain MID00_08900 IPR012340 Nucleic acid-binding, OB-fold MID00_08900 IPR006195 Aminoacyl-tRNA synthetase, class II MID00_08900 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type MID00_08900 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) MID00_08900 IPR004115 GAD-like domain superfamily MID00_08905 IPR036691 Endonuclease/exonuclease/phosphatase superfamily MID00_08905 IPR005135 Endonuclease/exonuclease/phosphatase MID00_08910 IPR030872 Cardiolipin synthase B MID00_08910 IPR025202 Phospholipase D-like domain MID00_08910 IPR001736 Phospholipase D/Transphosphatidylase MID00_08915 IPR036291 NAD(P)-binding domain superfamily MID00_08915 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site MID00_08915 IPR014183 Alcohol dehydrogenase class III MID00_08915 IPR013149 Alcohol dehydrogenase, C-terminal MID00_08915 IPR011032 GroES-like superfamily MID00_08915 IPR013154 Alcohol dehydrogenase, N-terminal MID00_08920 IPR029058 Alpha/Beta hydrolase fold MID00_08920 IPR000801 Putative esterase MID00_08920 IPR014186 S-formylglutathione hydrolase MID00_08925 IPR013324 RNA polymerase sigma factor, region 3/4-like MID00_08925 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria MID00_08925 IPR013325 RNA polymerase sigma factor, region 2 MID00_08925 IPR007630 RNA polymerase sigma-70 region 4 MID00_08925 IPR007627 RNA polymerase sigma-70 region 2 MID00_08925 IPR000943 RNA polymerase sigma-70 MID00_08925 IPR014284 RNA polymerase sigma-70 like domain MID00_08925 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_08925 IPR009042 RNA polymerase sigma-70 region 1.2 MID00_08930 IPR010105 TonB-dependent siderophore receptor MID00_08930 IPR012910 TonB-dependent receptor, plug domain MID00_08930 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_08930 IPR039426 Vitamin B12 transporter BtuB-like MID00_08930 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_08930 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_08930 IPR010917 TonB-dependent receptor, conserved site MID00_08940 IPR018422 Cation/H+ exchanger, CPA1 family MID00_08940 IPR006153 Cation/H+ exchanger MID00_08940 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria MID00_08940 IPR038770 Sodium/solute symporter superfamily MID00_08945 IPR000537 UbiA prenyltransferase family MID00_08945 IPR030470 UbiA prenyltransferase conserved site MID00_08945 IPR006369 Protohaem IX farnesyltransferase MID00_08950 IPR003780 COX15/CtaA family MID00_08950 IPR023755 Heme A synthase, type 1 MID00_08970 IPR024791 Cytochrome c oxidase subunit III MID00_08970 IPR033945 Cytochrome c oxidase subunit III domain MID00_08970 IPR000298 Cytochrome c oxidase subunit III-like MID00_08970 IPR035973 Cytochrome c oxidase subunit III-like superfamily MID00_08970 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle MID00_08985 IPR014241 Cytochrome c oxidase, subunit I bacterial type MID00_08985 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site MID00_08985 IPR000883 Cytochrome c oxidase subunit I MID00_08985 IPR036927 Cytochrome c oxidase-like, subunit I superfamily MID00_08985 IPR023616 Cytochrome c oxidase-like, subunit I domain MID00_08985 IPR033944 Cytochrome c oxidase subunit I domain MID00_08990 IPR001505 Copper centre Cu(A) MID00_08990 IPR008972 Cupredoxin MID00_08990 IPR014222 Cytochrome c oxidase, subunit II MID00_08990 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain MID00_08990 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily MID00_08990 IPR002429 Cytochrome c oxidase subunit II-like C-terminal MID00_09005 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase MID00_09005 IPR038009 GlmU, C-terminal LbH domain MID00_09005 IPR001451 Hexapeptide repeat MID00_09005 IPR025877 MobA-like NTP transferase MID00_09005 IPR029044 Nucleotide-diphospho-sugar transferases MID00_09005 IPR011004 Trimeric LpxA-like superfamily MID00_09005 IPR018357 Hexapeptide transferase, conserved site MID00_09010 IPR001296 Glycosyl transferase, family 1 MID00_09010 IPR000368 Sucrose synthase MID00_09010 IPR012820 Sucrose synthase, plant/cyanobacteria MID00_09015 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MID00_09015 IPR011008 Dimeric alpha-beta barrel MID00_09015 IPR019888 Transcription regulator AsnC-type MID00_09015 IPR019885 Transcription regulator HTH, AsnC-type, conserved site MID00_09015 IPR000485 AsnC-type HTH domain MID00_09015 IPR036390 Winged helix DNA-binding domain superfamily MID00_09015 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09015 IPR011991 ArsR-like helix-turn-helix domain MID00_09020 IPR001347 Sugar isomerase (SIS) MID00_09020 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising MID00_09020 IPR035490 GlmS/FrlB, SIS domain 2 MID00_09020 IPR035466 GlmS/AgaS, SIS domain 1 MID00_09020 IPR017932 Glutamine amidotransferase type 2 domain MID00_09020 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_09025 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09025 IPR013324 RNA polymerase sigma factor, region 3/4-like MID00_09025 IPR013325 RNA polymerase sigma factor, region 2 MID00_09025 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 MID00_09025 IPR007627 RNA polymerase sigma-70 region 2 MID00_09025 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site MID00_09025 IPR014284 RNA polymerase sigma-70 like domain MID00_09025 IPR039425 RNA polymerase sigma-70 like MID00_09035 IPR010105 TonB-dependent siderophore receptor MID00_09035 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_09035 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_09035 IPR039423 TonB-dependent receptor-like MID00_09035 IPR010917 TonB-dependent receptor, conserved site MID00_09035 IPR011662 Secretin/TonB, short N-terminal domain MID00_09035 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_09035 IPR012910 TonB-dependent receptor, plug domain MID00_09050 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA MID00_09050 IPR018211 Alcohol dehydrogenase, iron-type, conserved site MID00_09050 IPR039697 Iron-type alcohol dehydrogenase-like MID00_09060 IPR005119 LysR, substrate-binding MID00_09060 IPR000847 Transcription regulator HTH, LysR MID00_09060 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09060 IPR036390 Winged helix DNA-binding domain superfamily MID00_09065 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MID00_09065 IPR023214 HAD superfamily MID00_09065 IPR006323 Phosphonoacetaldehyde hydrolase MID00_09065 IPR006439 HAD hydrolase, subfamily IA MID00_09065 IPR036412 HAD-like superfamily MID00_09065 IPR041492 Haloacid dehalogenase-like hydrolase MID00_09095 IPR025944 Sigma-54 interaction domain, conserved site MID00_09095 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_09095 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_09095 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09095 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_09095 IPR009057 Homeobox-like domain superfamily MID00_09095 IPR029016 GAF-like domain superfamily MID00_09095 IPR003018 GAF domain MID00_09095 IPR003593 AAA+ ATPase domain MID00_09095 IPR002197 DNA binding HTH domain, Fis-type MID00_09100 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_09100 IPR020946 Flavin monooxygenase-like MID00_09105 IPR007055 BON domain MID00_09105 IPR014004 Transport-associated and nodulation domain, bacteria MID00_09110 IPR008462 CsbD-like domain MID00_09110 IPR026042 Stress response protein YjbJ MID00_09110 IPR036629 YjbJ superfamily MID00_09115 IPR005119 LysR, substrate-binding MID00_09115 IPR000847 Transcription regulator HTH, LysR MID00_09115 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09115 IPR036390 Winged helix DNA-binding domain superfamily MID00_09120 IPR003829 Pirin, N-terminal domain MID00_09120 IPR014710 RmlC-like jelly roll fold MID00_09120 IPR011051 RmlC-like cupin domain superfamily MID00_09120 IPR008778 Pirin, C-terminal domain MID00_09120 IPR012093 Pirin MID00_09125 IPR036380 Isochorismatase-like superfamily MID00_09125 IPR000868 Isochorismatase-like MID00_09130 IPR012093 Pirin MID00_09130 IPR008778 Pirin, C-terminal domain MID00_09130 IPR003829 Pirin, N-terminal domain MID00_09130 IPR014710 RmlC-like jelly roll fold MID00_09130 IPR011051 RmlC-like cupin domain superfamily MID00_09135 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase MID00_09135 IPR036291 NAD(P)-binding domain superfamily MID00_09135 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_09135 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_09140 IPR036259 MFS transporter superfamily MID00_09140 IPR005829 Sugar transporter, conserved site MID00_09140 IPR036292 Proline/betaine transporter ProP, C-terminal MID00_09140 IPR020846 Major facilitator superfamily domain MID00_09140 IPR015041 Osmosensory transporter coiled coil MID00_09140 IPR004736 MFS transporter, metabolite:H symporter MID00_09140 IPR005828 Major facilitator, sugar transporter-like MID00_09145 IPR005119 LysR, substrate-binding MID00_09145 IPR000847 Transcription regulator HTH, LysR MID00_09145 IPR036390 Winged helix DNA-binding domain superfamily MID00_09145 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09150 IPR023100 D-aminoacylase, insert domain superfamily MID00_09150 IPR032466 Metal-dependent hydrolase MID00_09150 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_09150 IPR013108 Amidohydrolase 3 MID00_09160 IPR023650 Beta-lactamase, class-A active site MID00_09160 IPR012338 Beta-lactamase/transpeptidase-like MID00_09160 IPR000871 Beta-lactamase, class-A MID00_09165 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_09165 IPR001110 Uncharacterised protein family UPF0012, conserved site MID00_09165 IPR003010 Carbon-nitrogen hydrolase MID00_09175 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted MID00_09175 IPR025714 Methyltransferase domain MID00_09175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_09180 IPR029787 Nucleotide cyclase MID00_09180 IPR000160 GGDEF domain MID00_09180 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region MID00_09185 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MID00_09185 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain MID00_09185 IPR006249 Aconitase/Iron-responsive element-binding protein 2 MID00_09185 IPR018136 Aconitase family, 4Fe-4S cluster binding site MID00_09185 IPR036008 Aconitase, iron-sulfur domain MID00_09185 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain MID00_09190 IPR020846 Major facilitator superfamily domain MID00_09190 IPR036259 MFS transporter superfamily MID00_09190 IPR011701 Major facilitator superfamily MID00_09195 IPR036812 NADP-dependent oxidoreductase domain superfamily MID00_09195 IPR023210 NADP-dependent oxidoreductase domain MID00_09195 IPR020471 Aldo/keto reductase MID00_09195 IPR018170 Aldo/keto reductase, conserved site MID00_09200 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_09200 IPR040442 Pyruvate kinase-like domain superfamily MID00_09200 IPR003700 Ketopantoate hydroxymethyltransferase MID00_09205 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain MID00_09205 IPR000847 Transcription regulator HTH, LysR MID00_09205 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09205 IPR036390 Winged helix DNA-binding domain superfamily MID00_09205 IPR005119 LysR, substrate-binding MID00_09220 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like MID00_09220 IPR017485 Tryptophan 2,3-dioxygenase, bacterial MID00_09220 IPR004981 Tryptophan 2,3-dioxygenase MID00_09230 IPR011008 Dimeric alpha-beta barrel MID00_09230 IPR036390 Winged helix DNA-binding domain superfamily MID00_09230 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09230 IPR019885 Transcription regulator HTH, AsnC-type, conserved site MID00_09230 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MID00_09230 IPR019888 Transcription regulator AsnC-type MID00_09230 IPR011991 ArsR-like helix-turn-helix domain MID00_09230 IPR000485 AsnC-type HTH domain MID00_09235 IPR036390 Winged helix DNA-binding domain superfamily MID00_09235 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09235 IPR000524 Transcription regulator HTH, GntR MID00_09235 IPR008920 Transcription regulator FadR/GntR, C-terminal MID00_09235 IPR011711 GntR, C-terminal MID00_09240 IPR042096 Dihydroxy-acid dehydratase, C-terminal MID00_09240 IPR004404 Dihydroxy-acid dehydratase MID00_09240 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase MID00_09240 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site MID00_09240 IPR037237 IlvD/EDD, N-terminal domain MID00_09245 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site MID00_09245 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain MID00_09245 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_09245 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding MID00_09245 IPR015815 3-hydroxyisobutyrate dehydrogenase-related MID00_09245 IPR036291 NAD(P)-binding domain superfamily MID00_09245 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_09255 IPR036291 NAD(P)-binding domain superfamily MID00_09255 IPR001509 NAD-dependent epimerase/dehydratase MID00_09260 IPR026289 Solute binding protein, TakP-like MID00_09260 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_09260 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_09260 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_09260 IPR041721 Lactate-binding periplasmic protein TTHA0766 MID00_09270 IPR004681 TRAP transporter large membrane protein DctM MID00_09270 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_09280 IPR036291 NAD(P)-binding domain superfamily MID00_09280 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain MID00_09280 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MID00_09285 IPR000262 FMN-dependent dehydrogenase MID00_09285 IPR037396 FMN hydroxy acid dehydrogenase domain MID00_09285 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site MID00_09285 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent MID00_09285 IPR013785 Aldolase-type TIM barrel MID00_09300 IPR005669 Thiosulphate/Sulfate-binding protein MID00_09300 IPR034408 Sulphate/thiosulphate-binding site MID00_09300 IPR000957 Sulphate/thiosulphate-binding, conserved site MID00_09305 IPR011865 Sulphate ABC transporter, permease protein CysT MID00_09305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_09305 IPR035906 MetI-like superfamily MID00_09305 IPR005667 Sulphate ABC transporter permease protein 2 MID00_09310 IPR011866 Sulphate ABC transporter, permease protein CysW MID00_09310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_09310 IPR005667 Sulphate ABC transporter permease protein 2 MID00_09310 IPR035906 MetI-like superfamily MID00_09315 IPR007481 Stringent starvation protein B MID00_09315 IPR036760 SspB-like superfamily MID00_09320 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_09320 IPR036249 Thioredoxin-like superfamily MID00_09320 IPR010987 Glutathione S-transferase, C-terminal-like MID00_09320 IPR034341 Stringent starvation protein A, N-terminal MID00_09320 IPR004046 Glutathione S-transferase, C-terminal MID00_09320 IPR004045 Glutathione S-transferase, N-terminal MID00_09320 IPR040079 Glutathione Transferase family MID00_09325 IPR002326 Cytochrome c1 MID00_09325 IPR036909 Cytochrome c-like domain superfamily MID00_09325 IPR009056 Cytochrome c-like domain MID00_09330 IPR016174 Di-haem cytochrome, transmembrane MID00_09330 IPR005798 Cytochrome b/b6, C-terminal MID00_09330 IPR036150 Cytochrome b/b6, C-terminal domain superfamily MID00_09330 IPR005797 Cytochrome b/b6, N-terminal MID00_09330 IPR027387 Cytochrome b/b6-like domain superfamily MID00_09330 IPR030689 Cytochrome b MID00_09335 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit MID00_09335 IPR005805 Rieske iron-sulphur protein, C-terminal MID00_09335 IPR014349 Rieske iron-sulphur protein MID00_09335 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_09335 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_09335 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal MID00_09340 IPR036019 Gated mechanosensitive channel MID00_09340 IPR001185 Large-conductance mechanosensitive channel MID00_09340 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L MID00_09345 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MID00_09345 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily MID00_09350 IPR001478 PDZ domain MID00_09350 IPR036034 PDZ superfamily MID00_09350 IPR011782 Peptidase S1C, Do MID00_09350 IPR009003 Peptidase S1, PA clan MID00_09350 IPR001940 Peptidase S1C MID00_09355 IPR019820 Sec-independent periplasmic protein translocase, conserved site MID00_09355 IPR002033 Sec-independent periplasmic protein translocase TatC MID00_09360 IPR003369 Sec-independent protein translocase protein TatA/B/E MID00_09360 IPR018448 Twin-arginine translocation protein TatB MID00_09365 IPR003369 Sec-independent protein translocase protein TatA/B/E MID00_09365 IPR006312 Sec-independent protein translocase protein TatA/E MID00_09370 IPR019808 Histidine triad, conserved site MID00_09370 IPR001310 Histidine triad (HIT) protein MID00_09370 IPR011146 HIT-like domain MID00_09370 IPR036265 HIT-like superfamily MID00_09375 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase MID00_09375 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like MID00_09380 IPR026660 Phosphoribosyl-AMP cyclohydrolase MID00_09380 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily MID00_09380 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain MID00_09385 IPR011060 Ribulose-phosphate binding barrel MID00_09385 IPR004651 Histidine biosynthesis, HisF MID00_09385 IPR013785 Aldolase-type TIM barrel MID00_09385 IPR006062 Histidine biosynthesis MID00_09390 IPR013785 Aldolase-type TIM barrel MID00_09390 IPR006062 Histidine biosynthesis MID00_09390 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA MID00_09390 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase MID00_09390 IPR011060 Ribulose-phosphate binding barrel MID00_09395 IPR029062 Class I glutamine amidotransferase-like MID00_09395 IPR017926 Glutamine amidotransferase MID00_09395 IPR010139 Imidazole glycerol phosphate synthase, subunit H MID00_09400 IPR000807 Imidazoleglycerol-phosphate dehydratase MID00_09400 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site MID00_09400 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_09400 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily MID00_09405 IPR016161 Aldehyde/histidinol dehydrogenase MID00_09405 IPR001692 Histidinol dehydrogenase, conserved site MID00_09405 IPR022695 Histidinol dehydrogenase, monofunctional MID00_09405 IPR012131 Histidinol dehydrogenase MID00_09410 IPR001348 ATP phosphoribosyltransferase HisG MID00_09410 IPR024893 ATP phosphoribosyltransferase HisG, short form MID00_09410 IPR018198 ATP phosphoribosyltransferase, conserved site MID00_09410 IPR013820 ATP phosphoribosyltransferase, catalytic domain MID00_09415 IPR001986 Enolpyruvate transferase domain MID00_09415 IPR036968 Enolpyruvate transferase domain superfamily MID00_09415 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MID00_09415 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta MID00_09425 IPR013525 ABC-2 type transporter MID00_09425 IPR000412 ABC-2 transporter MID00_09430 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09430 IPR017871 ABC transporter, conserved site MID00_09430 IPR003439 ABC transporter-like MID00_09430 IPR003593 AAA+ ATPase domain MID00_09445 IPR003399 Mce/MlaD MID00_09445 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD MID00_09450 IPR030802 ABC transporter permease MalE MID00_09450 IPR003453 ABC transport permease subunit MlaE, Proteobacteria MID00_09455 IPR003593 AAA+ ATPase domain MID00_09455 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl MID00_09455 IPR017871 ABC transporter, conserved site MID00_09455 IPR003439 ABC transporter-like MID00_09455 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09470 IPR036291 NAD(P)-binding domain superfamily MID00_09470 IPR001753 Enoyl-CoA hydratase/isomerase MID00_09470 IPR029045 ClpP/crotonase-like domain superfamily MID00_09470 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_09470 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_09470 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding MID00_09470 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal MID00_09475 IPR020613 Thiolase, conserved site MID00_09475 IPR002155 Thiolase MID00_09475 IPR016039 Thiolase-like MID00_09475 IPR020615 Thiolase, acyl-enzyme intermediate active site MID00_09475 IPR020610 Thiolase, active site MID00_09475 IPR020617 Thiolase, C-terminal MID00_09475 IPR020616 Thiolase, N-terminal MID00_09485 IPR037026 Vgr protein, OB-fold domain superfamily MID00_09485 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset MID00_09485 IPR010609 Gp5, C-terminal MID00_09485 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein MID00_09485 IPR006531 Gp5 N-terminal MID00_09520 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 MID00_09525 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath MID00_09535 IPR007048 IraD/Gp25-like MID00_09535 IPR017737 Type VI secretion system-related protein MID00_09540 IPR010272 Type VI secretion system, TssF-like MID00_09565 IPR010263 Type VI secretion protein, VC_A0114 MID00_09570 IPR039567 Glycine zipper domain MID00_09570 IPR006664 Outer membrane protein, bacterial MID00_09570 IPR006665 OmpA-like domain MID00_09570 IPR006690 Outer membrane protein, OmpA-like, conserved site MID00_09570 IPR036737 OmpA-like domain superfamily MID00_09575 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09575 IPR010623 Type VI secretion system IcmF, C-terminal MID00_09575 IPR025743 IcmF-related, N-terminal domain MID00_09575 IPR017731 Type VI secretion system, IcmF MID00_09575 IPR009612 IcmF-related MID00_09590 IPR000620 EamA domain MID00_09595 IPR036390 Winged helix DNA-binding domain superfamily MID00_09595 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09595 IPR004839 Aminotransferase, class I/classII MID00_09595 IPR015424 Pyridoxal phosphate-dependent transferase MID00_09595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_09595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_09595 IPR000524 Transcription regulator HTH, GntR MID00_09600 IPR000620 EamA domain MID00_09605 IPR006043 Xanthine/uracil/vitamin C permease MID00_09605 IPR006042 Xanthine/uracil permease MID00_09605 IPR017588 Uric acid permease UacT-like MID00_09610 IPR016039 Thiolase-like MID00_09610 IPR006162 Phosphopantetheine attachment site MID00_09610 IPR009081 Phosphopantetheine binding ACP domain MID00_09610 IPR020806 Polyketide synthase, phosphopantetheine-binding domain MID00_09610 IPR013968 Polyketide synthase, ketoreductase domain MID00_09610 IPR020843 Polyketide synthase, enoylreductase domain MID00_09610 IPR042104 Polyketide synthase, dehydratase domain superfamily MID00_09610 IPR020807 Polyketide synthase, dehydratase domain MID00_09610 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MID00_09610 IPR032821 Ketoacyl-synthetase, C-terminal extension MID00_09610 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding MID00_09610 IPR014030 Beta-ketoacyl synthase, N-terminal MID00_09610 IPR001227 Acyl transferase domain superfamily MID00_09610 IPR036736 ACP-like superfamily MID00_09610 IPR014043 Acyl transferase MID00_09610 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MID00_09610 IPR036291 NAD(P)-binding domain superfamily MID00_09610 IPR011032 GroES-like superfamily MID00_09610 IPR018201 Beta-ketoacyl synthase, active site MID00_09610 IPR014031 Beta-ketoacyl synthase, C-terminal MID00_09610 IPR013154 Alcohol dehydrogenase, N-terminal MID00_09615 IPR036291 NAD(P)-binding domain superfamily MID00_09615 IPR006162 Phosphopantetheine attachment site MID00_09615 IPR016039 Thiolase-like MID00_09615 IPR020843 Polyketide synthase, enoylreductase domain MID00_09615 IPR042104 Polyketide synthase, dehydratase domain superfamily MID00_09615 IPR020807 Polyketide synthase, dehydratase domain MID00_09615 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MID00_09615 IPR032821 Ketoacyl-synthetase, C-terminal extension MID00_09615 IPR009081 Phosphopantetheine binding ACP domain MID00_09615 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding MID00_09615 IPR014031 Beta-ketoacyl synthase, C-terminal MID00_09615 IPR020806 Polyketide synthase, phosphopantetheine-binding domain MID00_09615 IPR036736 ACP-like superfamily MID00_09615 IPR014043 Acyl transferase MID00_09615 IPR014030 Beta-ketoacyl synthase, N-terminal MID00_09615 IPR013968 Polyketide synthase, ketoreductase domain MID00_09615 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MID00_09615 IPR013154 Alcohol dehydrogenase, N-terminal MID00_09615 IPR011032 GroES-like superfamily MID00_09615 IPR018201 Beta-ketoacyl synthase, active site MID00_09620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_09620 IPR015424 Pyridoxal phosphate-dependent transferase MID00_09620 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type MID00_09620 IPR004839 Aminotransferase, class I/classII MID00_09620 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site MID00_09620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_09620 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type MID00_09625 IPR003715 Polysaccharide export protein MID00_09630 IPR013525 ABC-2 type transporter MID00_09630 IPR000412 ABC-2 transporter MID00_09635 IPR003593 AAA+ ATPase domain MID00_09635 IPR003439 ABC transporter-like MID00_09635 IPR017871 ABC transporter, conserved site MID00_09635 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09640 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD MID00_09650 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain MID00_09650 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like MID00_09655 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC MID00_09655 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase MID00_09655 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal MID00_09655 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation MID00_09655 IPR017476 UDP-glucose/GDP-mannose dehydrogenase MID00_09655 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal MID00_09655 IPR036291 NAD(P)-binding domain superfamily MID00_09655 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_09655 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily MID00_09660 IPR001296 Glycosyl transferase, family 1 MID00_09680 IPR001296 Glycosyl transferase, family 1 MID00_09680 IPR011835 Bacterial/plant glycogen synthase MID00_09680 IPR013534 Starch synthase, catalytic domain MID00_09690 IPR029044 Nucleotide-diphospho-sugar transferases MID00_09695 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_09695 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_09695 IPR036291 NAD(P)-binding domain superfamily MID00_09715 IPR001672 Phosphoglucose isomerase (PGI) MID00_09715 IPR023096 Phosphoglucose isomerase, C-terminal MID00_09715 IPR018189 Phosphoglucose isomerase, conserved site MID00_09715 IPR035476 Phosphoglucose isomerase, SIS domain 1 MID00_09715 IPR035482 Phosphoglucose isomerase, SIS domain 2 MID00_09730 IPR032688 ABC-2 family transporter protein MID00_09735 IPR003439 ABC transporter-like MID00_09735 IPR003593 AAA+ ATPase domain MID00_09735 IPR017871 ABC transporter, conserved site MID00_09735 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09740 IPR022441 Parallel beta-helix repeat-2 MID00_09740 IPR011050 Pectin lyase fold/virulence factor MID00_09740 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain MID00_09740 IPR026464 Nitrous oxide reductase family maturation protein NosD MID00_09740 IPR006626 Parallel beta-helix repeat MID00_09740 IPR006633 Carbohydrate-binding/sugar hydrolysis domain MID00_09740 IPR012334 Pectin lyase fold MID00_09745 IPR023644 Nitrous-oxide reductase MID00_09745 IPR041114 Nitrous oxide reductase, propeller repeat 1 MID00_09745 IPR011045 Nitrous oxide reductase, N-terminal MID00_09745 IPR028096 EfeO-type cupredoxin-like domain MID00_09745 IPR008972 Cupredoxin MID00_09745 IPR002429 Cytochrome c oxidase subunit II-like C-terminal MID00_09745 IPR041142 Nitrous oxide reductase, propeller repeat 2 MID00_09745 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_09745 IPR015943 WD40/YVTN repeat-like-containing domain superfamily MID00_09750 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_09750 IPR011399 Nitrous oxide reductase expression regulator NosR MID00_09750 IPR007329 FMN-binding MID00_09755 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase MID00_09755 IPR036873 Rhodanese-like domain superfamily MID00_09755 IPR001763 Rhodanese-like domain MID00_09755 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09760 IPR010918 PurM-like, C-terminal domain MID00_09760 IPR036676 PurM-like, C-terminal domain superfamily MID00_09760 IPR023061 Selenophosphate synthetase, class I MID00_09760 IPR004536 Selenophosphate synthetase MID00_09760 IPR036921 PurM-like, N-terminal domain superfamily MID00_09760 IPR016188 PurM-like, N-terminal domain MID00_09770 IPR039426 Vitamin B12 transporter BtuB-like MID00_09770 IPR012910 TonB-dependent receptor, plug domain MID00_09770 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_09770 IPR010916 TonB box, conserved site MID00_09770 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_09770 IPR010917 TonB-dependent receptor, conserved site MID00_09770 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_09775 IPR010105 TonB-dependent siderophore receptor MID00_09775 IPR010917 TonB-dependent receptor, conserved site MID00_09775 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_09775 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_09775 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_09775 IPR012910 TonB-dependent receptor, plug domain MID00_09775 IPR039426 Vitamin B12 transporter BtuB-like MID00_09780 IPR042100 Bordetella uptake gene, domain 1 MID00_09780 IPR005064 Bordetella uptake gene MID00_09790 IPR036409 Class II aldolase/adducin N-terminal domain superfamily MID00_09790 IPR001303 Class II aldolase/adducin N-terminal MID00_09790 IPR004782 L-fucose phosphate aldolase MID00_09795 IPR010982 Lambda repressor-like, DNA-binding domain superfamily MID00_09795 IPR001387 Cro/C1-type helix-turn-helix domain MID00_09805 IPR015190 Translation elongation factor SelB, winged helix, type 2 MID00_09805 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_09805 IPR000795 Transcription factor, GTP-binding domain MID00_09805 IPR004535 Translation elongation factor, selenocysteine-specific MID00_09805 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_09805 IPR015191 Translation elongation factor SelB, winged helix, type 3 MID00_09805 IPR031157 Tr-type G domain, conserved site MID00_09805 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MID00_09805 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09805 IPR036390 Winged helix DNA-binding domain superfamily MID00_09805 IPR009000 Translation protein, beta-barrel domain superfamily MID00_09810 IPR018319 L-seryl-tRNA selenium transferase-like MID00_09810 IPR015424 Pyridoxal phosphate-dependent transferase MID00_09810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_09810 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain MID00_09810 IPR004534 L-seryl-tRNA(Sec) selenium transferase MID00_09815 IPR024064 FdhE-like superfamily MID00_09815 IPR006452 Formate dehydrogenase accessory protein MID00_09820 IPR006471 Formate dehydrogenase, gamma subunit MID00_09820 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase MID00_09820 IPR016174 Di-haem cytochrome, transmembrane MID00_09825 IPR038384 Formate dehydrogenase, C-terminal domain superfamily MID00_09825 IPR015246 Formate dehydrogenase, transmembrane MID00_09825 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_09825 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_09825 IPR014603 Formate dehydrogenase iron-sulphur subunit MID00_09825 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria MID00_09840 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_09840 IPR000132 Nitrilase/cyanide hydratase, conserved site MID00_09840 IPR003010 Carbon-nitrogen hydrolase MID00_09845 IPR036259 MFS transporter superfamily MID00_09845 IPR005829 Sugar transporter, conserved site MID00_09845 IPR036292 Proline/betaine transporter ProP, C-terminal MID00_09845 IPR015041 Osmosensory transporter coiled coil MID00_09845 IPR004736 MFS transporter, metabolite:H symporter MID00_09845 IPR005828 Major facilitator, sugar transporter-like MID00_09845 IPR020846 Major facilitator superfamily domain MID00_09850 IPR000847 Transcription regulator HTH, LysR MID00_09850 IPR036390 Winged helix DNA-binding domain superfamily MID00_09850 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09850 IPR005119 LysR, substrate-binding MID00_09855 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_09855 IPR039420 Transcriptional regulatory protein WalR-like MID00_09855 IPR001789 Signal transduction response regulator, receiver domain MID00_09855 IPR016032 Signal transduction response regulator, C-terminal effector MID00_09855 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_09855 IPR011006 CheY-like superfamily MID00_09860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_09860 IPR006290 Heavy metal sensor kinase MID00_09860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_09860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_09860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_09860 IPR005467 Histidine kinase domain MID00_09860 IPR003594 Histidine kinase/HSP90-like ATPase MID00_09860 IPR003660 HAMP domain MID00_09875 IPR002823 Protein of unknown function DUF112, transmembrane MID00_09880 IPR017516 AbrB duplication MID00_09880 IPR007820 AbrB family MID00_09890 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MID00_09890 IPR018152 Superoxide dismutase, copper/zinc, binding site MID00_09890 IPR001424 Superoxide dismutase, copper/zinc binding domain MID00_09890 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily MID00_09895 IPR004498 Ribosomal protein L11 methyltransferase MID00_09895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_09900 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site MID00_09900 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal MID00_09900 IPR011530 Ribosomal RNA adenine dimethylase MID00_09900 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm MID00_09900 IPR023165 rRNA adenine dimethylase-like MID00_09900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_09915 IPR002898 MotA/TolQ/ExbB proton channel MID00_09915 IPR014163 Tol-Pal system, TolQ MID00_09920 IPR003400 Biopolymer transport protein ExbD/TolR MID00_09945 IPR027304 Trigger factor/SurA domain superfamily MID00_09945 IPR023059 Foldase protein PrsA MID00_09945 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type MID00_09985 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase MID00_09985 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain MID00_09985 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase MID00_09985 IPR036291 NAD(P)-binding domain superfamily MID00_09985 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily MID00_09985 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily MID00_09985 IPR018214 Glutamyl-tRNA reductase, conserved site MID00_09985 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal MID00_09990 IPR004373 Peptide chain release factor 1 MID00_09990 IPR000352 Peptide chain release factor class I MID00_09990 IPR005139 Peptide chain release factor MID00_09995 IPR040758 Release factor glutamine methyltransferase, N-terminal domain MID00_09995 IPR007848 Methyltransferase small domain MID00_09995 IPR004556 Methyltransferase HemK-like MID00_09995 IPR002052 DNA methylase, N-6 adenine-specific, conserved site MID00_09995 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific MID00_09995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_10000 IPR036249 Thioredoxin-like superfamily MID00_10000 IPR004480 Monothiol glutaredoxin-related MID00_10000 IPR014434 Monothiol glutaredoxin MID00_10000 IPR033658 Glutaredoxin, PICOT-like MID00_10000 IPR002109 Glutaredoxin MID00_10005 IPR003382 Flavoprotein MID00_10005 IPR004507 Flavin prenyltransferase UbiX-like MID00_10005 IPR036551 Flavin prenyltransferase-like MID00_10010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_10010 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal MID00_10010 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase MID00_10025 IPR014748 Enoyl-CoA hydratase, C-terminal MID00_10025 IPR001753 Enoyl-CoA hydratase/isomerase MID00_10025 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_10025 IPR029045 ClpP/crotonase-like domain superfamily MID00_10035 IPR000568 ATP synthase, F0 complex, subunit A MID00_10035 IPR023011 ATP synthase, F0 complex, subunit A, active site MID00_10035 IPR035908 ATP synthase, F0 complex, subunit A superfamily MID00_10040 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast MID00_10040 IPR000454 ATP synthase, F0 complex, subunit C MID00_10040 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site MID00_10040 IPR038662 F1F0 ATP synthase subunit C superfamily MID00_10040 IPR002379 V-ATPase proteolipid subunit C-like domain MID00_10040 IPR035921 F/V-ATP synthase subunit C superfamily MID00_10045 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily MID00_10045 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast MID00_10045 IPR005864 ATP synthase, F0 complex, subunit b, bacterial MID00_10050 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily MID00_10050 IPR000711 ATPase, OSCP/delta subunit MID00_10055 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain MID00_10055 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily MID00_10055 IPR000793 ATP synthase, alpha subunit, C-terminal MID00_10055 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily MID00_10055 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain MID00_10055 IPR005294 ATP synthase, F1 complex, alpha subunit MID00_10055 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site MID00_10055 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain MID00_10055 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily MID00_10055 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10060 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site MID00_10060 IPR000131 ATP synthase, F1 complex, gamma subunit MID00_10060 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily MID00_10065 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal MID00_10065 IPR003593 AAA+ ATPase domain MID00_10065 IPR005722 ATP synthase, F1 complex, beta subunit MID00_10065 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site MID00_10065 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain MID00_10065 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily MID00_10065 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain MID00_10065 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10070 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit MID00_10070 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily MID00_10070 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal MID00_10070 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal MID00_10075 IPR029903 RmlD-like substrate binding domain MID00_10075 IPR036291 NAD(P)-binding domain superfamily MID00_10075 IPR005913 dTDP-4-dehydrorhamnose reductase family MID00_10080 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related MID00_10080 IPR014710 RmlC-like jelly roll fold MID00_10080 IPR011051 RmlC-like cupin domain superfamily MID00_10085 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form MID00_10085 IPR005835 Nucleotidyl transferase domain MID00_10085 IPR029044 Nucleotide-diphospho-sugar transferases MID00_10090 IPR016040 NAD(P)-binding domain MID00_10090 IPR005888 dTDP-glucose 4,6-dehydratase MID00_10090 IPR036291 NAD(P)-binding domain superfamily MID00_10100 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain MID00_10100 IPR002797 Polysaccharide biosynthesis protein MID00_10115 IPR001173 Glycosyltransferase 2-like MID00_10115 IPR029044 Nucleotide-diphospho-sugar transferases MID00_10120 IPR003362 Bacterial sugar transferase MID00_10120 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase MID00_10120 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP MID00_10135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_10135 IPR035906 MetI-like superfamily MID00_10140 IPR015859 ABC transporter, taurine import, TauD MID00_10140 IPR003439 ABC transporter-like MID00_10140 IPR017871 ABC transporter, conserved site MID00_10140 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10140 IPR003593 AAA+ ATPase domain MID00_10145 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_10145 IPR040442 Pyruvate kinase-like domain superfamily MID00_10145 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales MID00_10145 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase MID00_10145 IPR005000 HpcH/HpaI aldolase/citrate lyase domain MID00_10150 IPR005119 LysR, substrate-binding MID00_10150 IPR000847 Transcription regulator HTH, LysR MID00_10150 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_10150 IPR036390 Winged helix DNA-binding domain superfamily MID00_10155 IPR028615 Maleate isomerase MID00_10155 IPR026286 Maleate isomerase/Arylmalonate decarboxylase MID00_10160 IPR016040 NAD(P)-binding domain MID00_10160 IPR036291 NAD(P)-binding domain superfamily MID00_10160 IPR005886 UDP-glucose 4-epimerase MID00_10165 IPR001451 Hexapeptide repeat MID00_10165 IPR011004 Trimeric LpxA-like superfamily MID00_10170 IPR041582 RimO, TRAM domain MID00_10170 IPR007197 Radical SAM MID00_10170 IPR023404 Radical SAM, alpha/beta horseshoe MID00_10170 IPR005840 Ribosomal protein S12 methylthiotransferase RimO MID00_10170 IPR002792 TRAM domain MID00_10170 IPR038135 Methylthiotransferase, N-terminal domain superfamily MID00_10170 IPR020612 Methylthiotransferase, conserved site MID00_10170 IPR005839 Methylthiotransferase MID00_10170 IPR006638 Elp3/MiaB/NifB MID00_10170 IPR013848 Methylthiotransferase, N-terminal MID00_10175 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae MID00_10175 IPR006027 NusB/RsmB/TIM44 MID00_10175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_10175 IPR004573 rRNA small subunit methyltransferase B MID00_10175 IPR023267 RNA (C5-cytosine) methyltransferase MID00_10175 IPR035926 NusB-like superfamily MID00_10175 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type MID00_10175 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site MID00_10185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_10185 IPR003660 HAMP domain MID00_10185 IPR003594 Histidine kinase/HSP90-like ATPase MID00_10185 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator MID00_10185 IPR005467 Histidine kinase domain MID00_10185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_10190 IPR001789 Signal transduction response regulator, receiver domain MID00_10190 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10190 IPR002197 DNA binding HTH domain, Fis-type MID00_10190 IPR009057 Homeobox-like domain superfamily MID00_10190 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_10190 IPR003593 AAA+ ATPase domain MID00_10190 IPR011006 CheY-like superfamily MID00_10190 IPR025944 Sigma-54 interaction domain, conserved site MID00_10190 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_10190 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_10195 IPR034964 Lumazine synthase MID00_10195 IPR002180 Lumazine/riboflavin synthase MID00_10195 IPR036467 Lumazine/riboflavin synthase superfamily MID00_10200 IPR003594 Histidine kinase/HSP90-like ATPase MID00_10200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_10200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_10200 IPR005467 Histidine kinase domain MID00_10200 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_10200 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_10205 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_10205 IPR039420 Transcriptional regulatory protein WalR-like MID00_10205 IPR001789 Signal transduction response regulator, receiver domain MID00_10205 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_10205 IPR011006 CheY-like superfamily MID00_10210 IPR039426 Vitamin B12 transporter BtuB-like MID00_10210 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_10210 IPR010916 TonB box, conserved site MID00_10210 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_10210 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_10210 IPR012910 TonB-dependent receptor, plug domain MID00_10210 IPR010917 TonB-dependent receptor, conserved site MID00_10215 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC MID00_10215 IPR013216 Methyltransferase type 11 MID00_10215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_10220 IPR005222 Competence protein ComF MID00_10220 IPR000836 Phosphoribosyltransferase domain MID00_10220 IPR029057 Phosphoribosyltransferase-like MID00_10225 IPR029028 Alpha/beta knot methyltransferases MID00_10225 IPR001537 tRNA/rRNA methyltransferase, SpoU type MID00_10225 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase MID00_10225 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MID00_10230 IPR005064 Bordetella uptake gene MID00_10230 IPR042100 Bordetella uptake gene, domain 1 MID00_10235 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_10235 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent MID00_10235 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal MID00_10235 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal MID00_10235 IPR036291 NAD(P)-binding domain superfamily MID00_10235 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_10240 IPR035958 SecB-like superfamily MID00_10240 IPR003708 Bacterial protein export chaperone SecB MID00_10245 IPR011767 Glutaredoxin active site MID00_10245 IPR036249 Thioredoxin-like superfamily MID00_10245 IPR011900 Glutaredoxin, GrxC MID00_10245 IPR002109 Glutaredoxin MID00_10245 IPR014025 Glutaredoxin subgroup MID00_10250 IPR036873 Rhodanese-like domain superfamily MID00_10250 IPR001763 Rhodanese-like domain MID00_10255 IPR005952 Phosphoglycerate mutase 1 MID00_10255 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site MID00_10255 IPR029033 Histidine phosphatase superfamily MID00_10255 IPR013078 Histidine phosphatase superfamily, clade-1 MID00_10260 IPR011055 Duplicated hybrid motif MID00_10260 IPR016047 Peptidase M23 MID00_10265 IPR005151 Tail specific protease MID00_10265 IPR004447 C-terminal-processing peptidase S41A MID00_10265 IPR036034 PDZ superfamily MID00_10265 IPR001478 PDZ domain MID00_10265 IPR029045 ClpP/crotonase-like domain superfamily MID00_10270 IPR000594 THIF-type NAD/FAD binding fold MID00_10270 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF MID00_10270 IPR035985 Ubiquitin-activating enzyme MID00_10275 IPR018060 DNA binding HTH domain, AraC-type MID00_10275 IPR020449 Transcription regulator HTH, AraC- type MID00_10275 IPR009057 Homeobox-like domain superfamily MID00_10280 IPR015590 Aldehyde dehydrogenase domain MID00_10280 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_10280 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_10280 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_10280 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_10280 IPR016161 Aldehyde/histidinol dehydrogenase MID00_10290 IPR001057 Glutamate/acetylglutamate kinase MID00_10290 IPR001048 Aspartate/glutamate/uridylate kinase MID00_10290 IPR037528 Acetylglutamate kinase ArgB MID00_10290 IPR004662 Acetylglutamate kinase family MID00_10290 IPR036393 Acetylglutamate kinase-like superfamily MID00_10290 IPR041727 N-Acetyl-L-glutamate kinase, cyclic MID00_10295 IPR013766 Thioredoxin domain MID00_10295 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_10295 IPR023555 Thiol-disulphide oxidoreductase ResA MID00_10295 IPR036249 Thioredoxin-like superfamily MID00_10305 IPR004515 Phosphoheptose isomerase MID00_10305 IPR001347 Sugar isomerase (SIS) MID00_10305 IPR035461 GmhA/DiaA MID00_10310 IPR011335 Restriction endonuclease type II-like MID00_10310 IPR011856 tRNA endonuclease-like domain superfamily MID00_10310 IPR003509 Uncharacterised protein family UPF0102 MID00_10315 IPR000878 Tetrapyrrole methylase MID00_10315 IPR035996 Tetrapyrrole methylase superfamily MID00_10315 IPR014777 Tetrapyrrole methylase, subdomain 1 MID00_10315 IPR014776 Tetrapyrrole methylase, subdomain 2 MID00_10315 IPR018063 SAM-dependent methyltransferase RsmI, conserved site MID00_10315 IPR008189 rRNA small subunit methyltransferase I MID00_10320 IPR034718 Endolytic peptidoglycan transglycosylase RlpA MID00_10320 IPR009009 RlpA-like protein, double-psi beta-barrel domain MID00_10320 IPR036908 RlpA-like domain superfamily MID00_10320 IPR012997 Rare lipoprotein A MID00_10320 IPR007730 Sporulation-like domain MID00_10320 IPR036680 Sporulation-like domain superfamily MID00_10325 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10325 IPR005337 RapZ-like family MID00_10330 IPR003755 HPr(Ser) kinase/phosphorylase MID00_10330 IPR011104 HPr kinase/phosphorylase, C-terminal MID00_10330 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal MID00_10330 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily MID00_10335 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN MID00_10335 IPR016152 Phosphotransferase/anion transporter MID00_10335 IPR002178 PTS EIIA type-2 domain MID00_10340 IPR036567 Ribosome hibernation promotion factor-like MID00_10340 IPR003489 Ribosome hibernation promoting factor/RaiA MID00_10345 IPR003593 AAA+ ATPase domain MID00_10345 IPR003439 ABC transporter-like MID00_10345 IPR017871 ABC transporter, conserved site MID00_10345 IPR030921 LPS export ABC transporter, ATP-binding protein LptB MID00_10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10360 IPR036412 HAD-like superfamily MID00_10360 IPR010023 KdsC family MID00_10360 IPR023214 HAD superfamily MID00_10365 IPR035474 KpsF-like, SIS domain MID00_10365 IPR001347 Sugar isomerase (SIS) MID00_10365 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type MID00_10365 IPR000644 CBS domain MID00_10375 IPR002585 Cytochrome ubiquinol oxidase subunit 1 MID00_10380 IPR003317 Cytochrome ubiquinol oxidase subunit 2 MID00_10385 IPR012994 Membrane bound YbgT-like MID00_10385 IPR011724 Cyd operon protein YbgT MID00_10390 IPR011527 ABC transporter type 1, transmembrane domain MID00_10390 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_10390 IPR003439 ABC transporter-like MID00_10390 IPR017871 ABC transporter, conserved site MID00_10390 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD MID00_10390 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10390 IPR039421 Type I protein exporter MID00_10390 IPR003593 AAA+ ATPase domain MID00_10395 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC MID00_10395 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10395 IPR011527 ABC transporter type 1, transmembrane domain MID00_10395 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_10395 IPR003439 ABC transporter-like MID00_10395 IPR003593 AAA+ ATPase domain MID00_10395 IPR017871 ABC transporter, conserved site MID00_10400 IPR000836 Phosphoribosyltransferase domain MID00_10400 IPR029057 Phosphoribosyltransferase-like MID00_10400 IPR005764 Adenine phosphoribosyl transferase MID00_10405 IPR036852 Peptidase S8/S53 domain superfamily MID00_10405 IPR015500 Peptidase S8, subtilisin-related MID00_10405 IPR034061 Autotransporter serine protease peptidase domain MID00_10405 IPR000209 Peptidase S8/S53 domain MID00_10405 IPR036709 Autotransporter beta-domain superfamily MID00_10405 IPR023828 Peptidase S8, subtilisin, Ser-active site MID00_10405 IPR005546 Autotransporter beta-domain MID00_10410 IPR015500 Peptidase S8, subtilisin-related MID00_10410 IPR023828 Peptidase S8, subtilisin, Ser-active site MID00_10410 IPR036852 Peptidase S8/S53 domain superfamily MID00_10410 IPR036709 Autotransporter beta-domain superfamily MID00_10410 IPR005546 Autotransporter beta-domain MID00_10410 IPR000209 Peptidase S8/S53 domain MID00_10410 IPR034061 Autotransporter serine protease peptidase domain MID00_10425 IPR032816 SNARE associated Golgi protein MID00_10430 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_10430 IPR001721 Threonine dehydratase, ACT-like domain MID00_10430 IPR038110 Threonine dehydratase, ACT-like domain superfamily MID00_10430 IPR005787 Threonine dehydratase, biosynthetic MID00_10430 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site MID00_10430 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_10435 IPR003778 Carboxyltransferase domain, subdomain A and B MID00_10435 IPR029000 Cyclophilin-like domain superfamily MID00_10440 IPR010016 KipI family MID00_10440 IPR003833 Carboxyltransferase domain, subdomain C and D MID00_10440 IPR029000 Cyclophilin-like domain superfamily MID00_10450 IPR021766 Phosphate regulon sensor protein PhoR MID00_10450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_10450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_10450 IPR005467 Histidine kinase domain MID00_10450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_10450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_10450 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR MID00_10450 IPR003594 Histidine kinase/HSP90-like ATPase MID00_10450 IPR035965 PAS domain superfamily MID00_10450 IPR013767 PAS fold MID00_10450 IPR000014 PAS domain MID00_10455 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_10455 IPR011006 CheY-like superfamily MID00_10455 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB MID00_10455 IPR001789 Signal transduction response regulator, receiver domain MID00_10455 IPR039420 Transcriptional regulatory protein WalR-like MID00_10455 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_10460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_10460 IPR004033 UbiE/COQ5 methyltransferase MID00_10460 IPR023576 UbiE/COQ5 methyltransferase, conserved site MID00_10475 IPR010232 Probable protein kinase UbiB MID00_10475 IPR004147 UbiB domain MID00_10475 IPR011009 Protein kinase-like domain superfamily MID00_10475 IPR000719 Protein kinase domain MID00_10485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_10485 IPR004821 Cytidyltransferase-like domain MID00_10485 IPR011914 RfaE bifunctional protein, domain II MID00_10490 IPR003423 Outer membrane efflux protein MID00_10490 IPR010130 Type I secretion outer membrane protein, TolC MID00_10495 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase MID00_10495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_10500 IPR035994 Nucleoside phosphorylase superfamily MID00_10500 IPR000845 Nucleoside phosphorylase domain MID00_10500 IPR010049 MTA/SAH nucleosidase MID00_10505 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase MID00_10505 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase MID00_10505 IPR029056 Ribokinase-like MID00_10510 IPR033983 Thiazole synthase ThiG MID00_10510 IPR008867 Thiazole synthase MID00_10510 IPR013785 Aldolase-type TIM barrel MID00_10525 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB MID00_10525 IPR004488 Magnesium/cobalt transport protein CorA MID00_10535 IPR004488 Magnesium/cobalt transport protein CorA MID00_10535 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB MID00_10545 IPR033900 Porin domain, Gram-negative type MID00_10545 IPR023614 Porin domain superfamily MID00_10545 IPR002299 Porin, Neisseria sp. type MID00_10545 IPR001702 Porin, Gram-negative type MID00_10555 IPR007627 RNA polymerase sigma-70 region 2 MID00_10555 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 MID00_10555 IPR013325 RNA polymerase sigma factor, region 2 MID00_10555 IPR013324 RNA polymerase sigma factor, region 3/4-like MID00_10555 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_10555 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site MID00_10555 IPR014284 RNA polymerase sigma-70 like domain MID00_10555 IPR039425 RNA polymerase sigma-70 like MID00_10565 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_10565 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_10565 IPR010105 TonB-dependent siderophore receptor MID00_10565 IPR011662 Secretin/TonB, short N-terminal domain MID00_10565 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_10565 IPR012910 TonB-dependent receptor, plug domain MID00_10565 IPR039423 TonB-dependent receptor-like MID00_10565 IPR010917 TonB-dependent receptor, conserved site MID00_10570 IPR002491 ABC transporter periplasmic binding domain MID00_10570 IPR023544 ABC transporter, vitamin B12-binding protein MID00_10575 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_10575 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_10575 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_10575 IPR012910 TonB-dependent receptor, plug domain MID00_10575 IPR039426 Vitamin B12 transporter BtuB-like MID00_10575 IPR010101 TonB-dependent vitamin B12 transporter BtuB MID00_10580 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily MID00_10580 IPR004223 Vitamin B12-dependent methionine synthase, activation domain MID00_10580 IPR000489 Pterin-binding domain MID00_10580 IPR011822 Cobalamin-dependent methionine synthase MID00_10580 IPR033706 Methionine synthase, B12-binding domain MID00_10580 IPR036594 Methionine synthase domain MID00_10580 IPR003726 Homocysteine-binding domain MID00_10580 IPR011005 Dihydropteroate synthase-like MID00_10580 IPR036724 Cobalamin-binding domain superfamily MID00_10580 IPR006158 Cobalamin (vitamin B12)-binding domain MID00_10580 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain MID00_10580 IPR036589 Homocysteine-binding domain superfamily MID00_10605 IPR013785 Aldolase-type TIM barrel MID00_10605 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_10605 IPR023753 FAD/NAD(P)-binding domain MID00_10605 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal MID00_10605 IPR037348 Trimethylamine dehydrogenase/Dimethylamine dehydrogenase, FMN-binding domain MID00_10610 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily MID00_10610 IPR017459 Glycosyl transferase family 3, N-terminal domain MID00_10610 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily MID00_10610 IPR005940 Anthranilate phosphoribosyl transferase MID00_10610 IPR000312 Glycosyl transferase, family 3 MID00_10615 IPR013785 Aldolase-type TIM barrel MID00_10615 IPR013798 Indole-3-glycerol phosphate synthase MID00_10615 IPR001468 Indole-3-glycerol phosphate synthase, conserved site MID00_10615 IPR011060 Ribulose-phosphate binding barrel MID00_10620 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal MID00_10620 IPR002986 Diaminopimelate decarboxylase, LysA MID00_10620 IPR029066 PLP-binding barrel MID00_10620 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal MID00_10620 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site MID00_10620 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal MID00_10620 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site MID00_10620 IPR000183 Ornithine/DAP/Arg decarboxylase MID00_10625 IPR012349 FMN-binding split barrel MID00_10625 IPR000659 Pyridoxamine 5'-phosphate oxidase MID00_10625 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative MID00_10625 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site MID00_10625 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal MID00_10630 IPR036259 MFS transporter superfamily MID00_10630 IPR020846 Major facilitator superfamily domain MID00_10630 IPR004638 Drug resistance transporter EmrB-like MID00_10630 IPR011701 Major facilitator superfamily MID00_10640 IPR003768 Segregation and condensation protein A MID00_10645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_10645 IPR003721 Pantoate-beta-alanine ligase MID00_10645 IPR004821 Cytidyltransferase-like domain MID00_10645 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain MID00_10650 IPR011006 CheY-like superfamily MID00_10650 IPR016032 Signal transduction response regulator, C-terminal effector MID00_10650 IPR001789 Signal transduction response regulator, receiver domain MID00_10650 IPR000792 Transcription regulator LuxR, C-terminal MID00_10650 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_10660 IPR001977 Dephospho-CoA kinase MID00_10660 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10665 IPR009777 Cell division protein ZapD MID00_10665 IPR027462 Z ring-associated protein D, C-terminal MID00_10665 IPR036268 ZapD domain superfamily MID00_10670 IPR006143 RND efflux pump, membrane fusion protein MID00_10670 IPR039562 Membrane fusion protein, biotin-lipoyl like domain MID00_10670 IPR022824 Multidrug resistance protein MdtA MID00_10675 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_10675 IPR001036 Acriflavin resistance protein MID00_10675 IPR022831 Multidrug resistance protein MdtB MID00_10680 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_10680 IPR001036 Acriflavin resistance protein MID00_10680 IPR023931 Multidrug resistance protein MdtC MID00_10685 IPR003423 Outer membrane efflux protein MID00_10685 IPR010131 RND efflux system, outer membrane lipoprotein, NodT MID00_10690 IPR030374 Polyamine biosynthesis domain MID00_10690 IPR001045 Spermidine/spermine synthases MID00_10690 IPR037163 Spermidine synthase, tetramerisation domain superfamily MID00_10690 IPR035246 Spermidine synthase, tetramerisation domain MID00_10690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_10690 IPR030373 Polyamine biosynthesis domain, conserved site MID00_10695 IPR000086 NUDIX hydrolase domain MID00_10695 IPR015797 NUDIX hydrolase-like domain superfamily MID00_10695 IPR020084 NUDIX hydrolase, conserved site MID00_10695 IPR020476 NUDIX hydrolase MID00_10705 IPR033749 Polyprenyl synthetase, conserved site MID00_10705 IPR000092 Polyprenyl synthetase MID00_10705 IPR008949 Isoprenoid synthase domain superfamily MID00_10710 IPR004445 Sodium/glutamate symport carrier protein GltS MID00_10715 IPR013549 Domain of unknown function DUF1731 MID00_10715 IPR001509 NAD-dependent epimerase/dehydratase MID00_10715 IPR036291 NAD(P)-binding domain superfamily MID00_10715 IPR010099 Epimerase family protein SDR39U1 MID00_10725 IPR007357 Deoxyribodipyrimidine photolyase-related protein MID00_10725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_10725 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily MID00_10730 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_10730 IPR036291 NAD(P)-binding domain superfamily MID00_10730 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_10750 IPR003333 Mycolic acid cyclopropane synthase MID00_10750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_10760 IPR002937 Amine oxidase MID00_10760 IPR014105 Carotenoid/retinoid oxidoreductase MID00_10760 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_10765 IPR009057 Homeobox-like domain superfamily MID00_10765 IPR001647 DNA-binding HTH domain, TetR-type MID00_10785 IPR003593 AAA+ ATPase domain MID00_10785 IPR003018 GAF domain MID00_10785 IPR029016 GAF-like domain superfamily MID00_10785 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_10785 IPR002197 DNA binding HTH domain, Fis-type MID00_10785 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10785 IPR009057 Homeobox-like domain superfamily MID00_10785 IPR025944 Sigma-54 interaction domain, conserved site MID00_10785 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_10785 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_10790 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site MID00_10790 IPR000883 Cytochrome c oxidase subunit I MID00_10790 IPR036927 Cytochrome c oxidase-like, subunit I superfamily MID00_10790 IPR023616 Cytochrome c oxidase-like, subunit I domain MID00_10795 IPR029045 ClpP/crotonase-like domain superfamily MID00_10795 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_10795 IPR001753 Enoyl-CoA hydratase/isomerase MID00_10800 IPR003781 CoA-binding MID00_10800 IPR011761 ATP-grasp fold MID00_10800 IPR036291 NAD(P)-binding domain superfamily MID00_10800 IPR013815 ATP-grasp fold, subdomain 1 MID00_10800 IPR016102 Succinyl-CoA synthetase-like MID00_10800 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain MID00_10805 IPR011701 Major facilitator superfamily MID00_10805 IPR020846 Major facilitator superfamily domain MID00_10805 IPR036259 MFS transporter superfamily MID00_10805 IPR004638 Drug resistance transporter EmrB-like MID00_10810 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_10810 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_10810 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_10810 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_10810 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_10810 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_10810 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain MID00_10815 IPR000835 MarR-type HTH domain MID00_10815 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_10815 IPR036390 Winged helix DNA-binding domain superfamily MID00_10820 IPR001287 Nitrite reductase, copper-type MID00_10820 IPR008972 Cupredoxin MID00_10820 IPR001117 Multicopper oxidase, type 1 MID00_10820 IPR011707 Multicopper oxidase, type 3 MID00_10835 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type MID00_10835 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B MID00_10840 IPR032808 DoxX family MID00_10845 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_10845 IPR000847 Transcription regulator HTH, LysR MID00_10845 IPR005119 LysR, substrate-binding MID00_10845 IPR036390 Winged helix DNA-binding domain superfamily MID00_10850 IPR023031 Orotate phosphoribosyltransferase MID00_10850 IPR004467 Orotate phosphoribosyl transferase domain MID00_10850 IPR000836 Phosphoribosyltransferase domain MID00_10850 IPR029057 Phosphoribosyltransferase-like MID00_10855 IPR018027 Asn/Gln amidotransferase MID00_10855 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like MID00_10855 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit MID00_10855 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 MID00_10855 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 MID00_10855 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site MID00_10855 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain MID00_10855 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E MID00_10855 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic MID00_10860 IPR000120 Amidase MID00_10860 IPR020556 Amidase, conserved site MID00_10860 IPR023631 Amidase signature domain MID00_10860 IPR036928 Amidase signature (AS) superfamily MID00_10860 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit MID00_10865 IPR003837 Glu-tRNAGln amidotransferase C subunit MID00_10865 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C MID00_10870 IPR004753 Cell shape determining protein MreB MID00_10875 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 MID00_10875 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 MID00_10875 IPR007221 Rod shape-determining protein MreC MID00_10885 IPR036138 Penicillin-binding protein, dimerisation domain superfamily MID00_10885 IPR001460 Penicillin-binding protein, transpeptidase MID00_10885 IPR017790 Penicillin-binding protein 2 MID00_10885 IPR012338 Beta-lactamase/transpeptidase-like MID00_10885 IPR005311 Penicillin-binding protein, dimerisation domain MID00_10890 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site MID00_10890 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB MID00_10890 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA MID00_10895 IPR005760 A/G-specific adenine glycosylase MutY MID00_10895 IPR011257 DNA glycosylase MID00_10895 IPR000445 Helix-hairpin-helix motif MID00_10895 IPR003265 HhH-GPD domain MID00_10895 IPR004036 Endonuclease III-like, conserved site-2 MID00_10895 IPR004035 Endonuclease III, iron-sulphur binding site MID00_10895 IPR029119 MutY, C-terminal MID00_10895 IPR015797 NUDIX hydrolase-like domain superfamily MID00_10895 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif MID00_10895 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal MID00_10900 IPR004513 Cell division protein FtsX MID00_10900 IPR040690 FtsX, extracellular domain MID00_10905 IPR003593 AAA+ ATPase domain MID00_10905 IPR017871 ABC transporter, conserved site MID00_10905 IPR005286 Cell division protein FtsE, ATP-binding MID00_10905 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10905 IPR003439 ABC transporter-like MID00_10910 IPR018313 Solute-binding protein family 3, conserved site MID00_10910 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_10915 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_10915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_10915 IPR035906 MetI-like superfamily MID00_10920 IPR035906 MetI-like superfamily MID00_10920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_10920 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_10925 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type MID00_10925 IPR003439 ABC transporter-like MID00_10925 IPR003593 AAA+ ATPase domain MID00_10925 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10925 IPR017871 ABC transporter, conserved site MID00_10930 IPR005064 Bordetella uptake gene MID00_10930 IPR042100 Bordetella uptake gene, domain 1 MID00_10935 IPR006690 Outer membrane protein, OmpA-like, conserved site MID00_10935 IPR036737 OmpA-like domain superfamily MID00_10935 IPR008722 Outer membrane porin F, N-terminal MID00_10935 IPR028974 TSP type-3 repeat MID00_10935 IPR006664 Outer membrane protein, bacterial MID00_10935 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel MID00_10935 IPR006665 OmpA-like domain MID00_10940 IPR025747 ThiC-associated domain MID00_10940 IPR038521 ThiC/Bza superfamily MID00_10940 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B MID00_10940 IPR037509 Phosphomethylpyrimidine synthase MID00_10960 IPR023080 D-amino acid dehydrogenase DadA MID00_10960 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_10960 IPR006076 FAD dependent oxidoreductase MID00_10965 IPR001048 Aspartate/glutamate/uridylate kinase MID00_10965 IPR036974 PUA domain superfamily MID00_10965 IPR015947 PUA-like superfamily MID00_10965 IPR002478 PUA domain MID00_10965 IPR036393 Acetylglutamate kinase-like superfamily MID00_10965 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase MID00_10965 IPR011529 Glutamate 5-kinase MID00_10965 IPR001057 Glutamate/acetylglutamate kinase MID00_10965 IPR019797 Glutamate 5-kinase, conserved site MID00_10965 IPR041739 Glutamate-5-kinase domain MID00_10970 IPR031167 OBG-type guanine nucleotide-binding (G) domain MID00_10970 IPR035101 GTP-binding protein, Obg-type MID00_10970 IPR014100 GTP-binding protein Obg/CgtA MID00_10970 IPR006074 GTP1/OBG, conserved site MID00_10970 IPR006169 GTP1/OBG domain MID00_10970 IPR036726 GTP1/OBG domain superfamily MID00_10970 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_10970 IPR006073 GTP binding domain MID00_10975 IPR001684 Ribosomal protein L27 MID00_10975 IPR018261 Ribosomal protein L27, conserved site MID00_10980 IPR018258 Ribosomal protein L21, conserved site MID00_10980 IPR001787 Ribosomal protein L21 MID00_10980 IPR028909 Ribosomal protein L21-like MID00_10980 IPR036164 L21-like superfamily MID00_10985 IPR026042 Stress response protein YjbJ MID00_10985 IPR036629 YjbJ superfamily MID00_10985 IPR008462 CsbD-like domain MID00_10995 IPR042195 ArgJ beta chain, C-terminal domain MID00_10995 IPR016117 ArgJ-like domain superfamily MID00_10995 IPR002813 Arginine biosynthesis protein ArgJ MID00_11005 IPR011957 Benzoate-CoA ligase family MID00_11005 IPR000873 AMP-dependent synthetase/ligase MID00_11005 IPR025110 AMP-binding enzyme, C-terminal domain MID00_11010 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase MID00_11010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_11010 IPR015424 Pyridoxal phosphate-dependent transferase MID00_11010 IPR005814 Aminotransferase class-III MID00_11010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_11015 IPR022998 Thiamine phosphate synthase/TenI MID00_11015 IPR034291 Thiamine phosphate synthase MID00_11015 IPR036206 Thiamin phosphate synthase superfamily MID00_11015 IPR013785 Aldolase-type TIM barrel MID00_11025 IPR018527 Rubredoxin, iron-binding site MID00_11025 IPR024935 Rubredoxin domain MID00_11025 IPR024934 Rubredoxin-like domain MID00_11025 IPR024922 Rubredoxin MID00_11030 IPR003774 Protein of unknown function UPF0301 MID00_11035 IPR037027 YqgF/RNase H-like domain superfamily MID00_11035 IPR006641 YqgF/RNase H-like domain MID00_11035 IPR005227 Putative pre-16S rRNA nuclease MID00_11035 IPR012337 Ribonuclease H-like superfamily MID00_11040 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase MID00_11040 IPR002123 Phospholipid/glycerol acyltransferase MID00_11045 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) MID00_11045 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type MID00_11045 IPR029052 Metallo-dependent phosphatase-like MID00_11055 IPR011812 Biosynthetic peptidoglycan transglycosylase MID00_11055 IPR023346 Lysozyme-like domain superfamily MID00_11055 IPR001264 Glycosyl transferase, family 51 MID00_11055 IPR036950 Penicillin binding protein transglycosylase domain MID00_11060 IPR041121 SDH, C-terminal MID00_11060 IPR011342 Shikimate dehydrogenase MID00_11060 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal MID00_11060 IPR022893 Shikimate dehydrogenase family MID00_11060 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase MID00_11060 IPR036291 NAD(P)-binding domain superfamily MID00_11075 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA MID00_11075 IPR029058 Alpha/Beta hydrolase fold MID00_11080 IPR004101 Mur ligase, C-terminal MID00_11080 IPR013221 Mur ligase, central MID00_11080 IPR005757 Murein peptide ligase MID00_11080 IPR000713 Mur ligase, N-terminal catalytic domain MID00_11080 IPR036615 Mur ligase, C-terminal domain superfamily MID00_11080 IPR036565 Mur-like, catalytic domain superfamily MID00_11085 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_11085 IPR023555 Thiol-disulphide oxidoreductase ResA MID00_11085 IPR036249 Thioredoxin-like superfamily MID00_11085 IPR013766 Thioredoxin domain MID00_11090 IPR001874 Dehydroquinase, class II MID00_11090 IPR018509 Dehydroquinase, class II, conserved site MID00_11090 IPR036441 Dehydroquinase, class II superfamily MID00_11095 IPR011053 Single hybrid motif MID00_11095 IPR001882 Biotin-binding site MID00_11095 IPR001249 Acetyl-CoA biotin carboxyl carrier MID00_11095 IPR000089 Biotin/lipoyl attachment MID00_11100 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase MID00_11100 IPR011054 Rudiment single hybrid motif MID00_11100 IPR011761 ATP-grasp fold MID00_11100 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain MID00_11100 IPR013815 ATP-grasp fold, subdomain 1 MID00_11100 IPR005482 Biotin carboxylase, C-terminal MID00_11100 IPR005481 Biotin carboxylase-like, N-terminal domain MID00_11100 IPR011764 Biotin carboxylation domain MID00_11100 IPR016185 Pre-ATP-grasp domain superfamily MID00_11105 IPR004498 Ribosomal protein L11 methyltransferase MID00_11105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_11115 IPR011611 Carbohydrate kinase PfkB MID00_11115 IPR029056 Ribokinase-like MID00_11115 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site MID00_11120 IPR008816 Glycine zipper 2TM domain MID00_11125 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain MID00_11125 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily MID00_11125 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11125 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding MID00_11125 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain MID00_11125 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site MID00_11125 IPR018062 HTH domain AraC-type, conserved site MID00_11125 IPR004026 Ada DNA repair, metal-binding MID00_11125 IPR016221 Bifunctional regulatory protein Ada MID00_11125 IPR035451 Ada-like domain superfamily MID00_11125 IPR009057 Homeobox-like domain superfamily MID00_11125 IPR018060 DNA binding HTH domain, AraC-type MID00_11130 IPR003425 CCB3/YggT MID00_11145 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11145 IPR000485 AsnC-type HTH domain MID00_11145 IPR011991 ArsR-like helix-turn-helix domain MID00_11145 IPR036390 Winged helix DNA-binding domain superfamily MID00_11145 IPR011008 Dimeric alpha-beta barrel MID00_11145 IPR019888 Transcription regulator AsnC-type MID00_11145 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MID00_11155 IPR038590 YaeQ superfamily MID00_11155 IPR009822 YaeQ MID00_11155 IPR011335 Restriction endonuclease type II-like MID00_11160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_11160 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 MID00_11160 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding MID00_11160 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial MID00_11160 IPR000924 Glutamyl/glutaminyl-tRNA synthetase MID00_11160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_11160 IPR033910 Glutamyl-tRNA synthetase MID00_11160 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain MID00_11165 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11165 IPR000792 Transcription regulator LuxR, C-terminal MID00_11165 IPR011006 CheY-like superfamily MID00_11165 IPR001789 Signal transduction response regulator, receiver domain MID00_11170 IPR011006 CheY-like superfamily MID00_11170 IPR003594 Histidine kinase/HSP90-like ATPase MID00_11170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_11170 IPR005467 Histidine kinase domain MID00_11170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_11170 IPR001789 Signal transduction response regulator, receiver domain MID00_11170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_11170 IPR013656 PAS fold-4 MID00_11170 IPR035965 PAS domain superfamily MID00_11170 IPR000700 PAS-associated, C-terminal MID00_11170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_11170 IPR001610 PAC motif MID00_11170 IPR000014 PAS domain MID00_11175 IPR001757 P-type ATPase MID00_11175 IPR006068 Cation-transporting P-type ATPase, C-terminal MID00_11175 IPR004014 Cation-transporting P-type ATPase, N-terminal MID00_11175 IPR023299 P-type ATPase, cytoplasmic domain N MID00_11175 IPR018303 P-type ATPase, phosphorylation site MID00_11175 IPR023298 P-type ATPase, transmembrane domain superfamily MID00_11175 IPR008250 P-type ATPase, A domain superfamily MID00_11175 IPR036412 HAD-like superfamily MID00_11175 IPR023214 HAD superfamily MID00_11175 IPR006415 P-type ATPase, subfamily IIIB MID00_11185 IPR000182 GNAT domain MID00_11185 IPR016181 Acyl-CoA N-acyltransferase MID00_11200 IPR023153 PSPTO4464-like domain superfamily MID00_11200 IPR006839 Ribosome-associated, YjgA MID00_11205 IPR002510 Metalloprotease TldD/PmbA MID00_11205 IPR035068 Metalloprotease TldD/PmbA, N-terminal MID00_11205 IPR036059 Metalloprotease TldD/PmbA superfamily MID00_11210 IPR026289 Solute binding protein, TakP-like MID00_11210 IPR041722 Alpha-keto acid binding periplasmic protein MID00_11210 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_11210 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_11210 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_11215 IPR036899 Ribosomal protein L13 superfamily MID00_11215 IPR005823 Ribosomal protein L13, bacterial-type MID00_11215 IPR005822 Ribosomal protein L13 MID00_11220 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_11220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_11220 IPR000754 Ribosomal protein S9 MID00_11220 IPR020574 Ribosomal protein S9, conserved site MID00_11220 IPR023035 Ribosomal protein S9, bacterial/plastid MID00_11225 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 MID00_11225 IPR036291 NAD(P)-binding domain superfamily MID00_11225 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site MID00_11225 IPR000534 Semialdehyde dehydrogenase, NAD-binding MID00_11225 IPR012280 Semialdehyde dehydrogenase, dimerisation domain MID00_11235 IPR023063 FeS cluster insertion protein ErpA MID00_11235 IPR035903 HesB-like domain superfamily MID00_11235 IPR016092 FeS cluster insertion protein MID00_11235 IPR017870 FeS cluster insertion, C-terminal, conserved site MID00_11235 IPR000361 FeS cluster biogenesis MID00_11240 IPR005338 Anhydro-N-acetylmuramic acid kinase MID00_11245 IPR011055 Duplicated hybrid motif MID00_11245 IPR007340 Opacity-associated protein A MID00_11245 IPR016047 Peptidase M23 MID00_11250 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_11250 IPR002305 Aminoacyl-tRNA synthetase, class Ic MID00_11250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_11250 IPR002942 RNA-binding S4 domain MID00_11250 IPR036986 RNA-binding S4 domain superfamily MID00_11250 IPR024088 Tyrosine-tRNA ligase, bacterial-type MID00_11250 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 MID00_11250 IPR002307 Tyrosine-tRNA ligase MID00_11255 IPR008914 Phosphatidylethanolamine-binding protein MID00_11255 IPR005247 YbhB/YbcL MID00_11255 IPR036610 PEBP-like superfamily MID00_11260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_11260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_11260 IPR001085 Serine hydroxymethyltransferase MID00_11260 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site MID00_11260 IPR039429 Serine hydroxymethyltransferase-like domain MID00_11260 IPR015424 Pyridoxal phosphate-dependent transferase MID00_11265 IPR005144 ATP-cone domain MID00_11265 IPR003796 Ribonucleotide reductase regulator NrdR-like MID00_11270 IPR011549 Riboflavin-specific deaminase, C-terminal MID00_11270 IPR016192 APOBEC/CMP deaminase, zinc-binding MID00_11270 IPR002125 Cytidine and deoxycytidylate deaminase domain MID00_11270 IPR016193 Cytidine deaminase-like MID00_11270 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal MID00_11270 IPR024072 Dihydrofolate reductase-like domain superfamily MID00_11270 IPR004794 Riboflavin biosynthesis protein RibD MID00_11280 IPR029062 Class I glutamine amidotransferase-like MID00_11280 IPR002818 DJ-1/PfpI MID00_11280 IPR009057 Homeobox-like domain superfamily MID00_11280 IPR018060 DNA binding HTH domain, AraC-type MID00_11280 IPR018062 HTH domain AraC-type, conserved site MID00_11295 IPR006234 O-succinylhomoserine sulfhydrylase MID00_11295 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme MID00_11295 IPR015424 Pyridoxal phosphate-dependent transferase MID00_11295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_11295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_11310 IPR013727 Two-component sensor kinase, N-terminal MID00_11310 IPR003660 HAMP domain MID00_11310 IPR003594 Histidine kinase/HSP90-like ATPase MID00_11310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_11310 IPR005467 Histidine kinase domain MID00_11310 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_11310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_11310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_11315 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11315 IPR011006 CheY-like superfamily MID00_11315 IPR039420 Transcriptional regulatory protein WalR-like MID00_11315 IPR001789 Signal transduction response regulator, receiver domain MID00_11315 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_11320 IPR005025 NADPH-dependent FMN reductase-like MID00_11320 IPR014063 Arsenate resistance ArsH MID00_11320 IPR029039 Flavoprotein-like superfamily MID00_11325 IPR006660 Arsenate reductase-like MID00_11325 IPR036249 Thioredoxin-like superfamily MID00_11325 IPR006659 Arsenate reductase MID00_11330 IPR000802 Arsenical pump membrane protein, ArsB MID00_11340 IPR005119 LysR, substrate-binding MID00_11340 IPR000847 Transcription regulator HTH, LysR MID00_11340 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11340 IPR036390 Winged helix DNA-binding domain superfamily MID00_11340 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 MID00_11355 IPR025110 AMP-binding enzyme, C-terminal domain MID00_11355 IPR020845 AMP-binding, conserved site MID00_11355 IPR000873 AMP-dependent synthetase/ligase MID00_11355 IPR042099 AMP-dependent synthetase-like superfamily MID00_11360 IPR005119 LysR, substrate-binding MID00_11360 IPR000847 Transcription regulator HTH, LysR MID00_11360 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11360 IPR036390 Winged helix DNA-binding domain superfamily MID00_11365 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein MID00_11370 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11370 IPR012693 ABC transporter, phosphonate import, PhnC MID00_11370 IPR003593 AAA+ ATPase domain MID00_11370 IPR003439 ABC transporter-like MID00_11370 IPR017871 ABC transporter, conserved site MID00_11375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_11375 IPR035906 MetI-like superfamily MID00_11375 IPR005769 ABC transporter, permease PhnE/PtxC MID00_11380 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA MID00_11380 IPR018211 Alcohol dehydrogenase, iron-type, conserved site MID00_11380 IPR039697 Iron-type alcohol dehydrogenase-like MID00_11385 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MID00_11385 IPR023214 HAD superfamily MID00_11385 IPR006323 Phosphonoacetaldehyde hydrolase MID00_11385 IPR006439 HAD hydrolase, subfamily IA MID00_11385 IPR036412 HAD-like superfamily MID00_11385 IPR041492 Haloacid dehalogenase-like hydrolase MID00_11390 IPR005119 LysR, substrate-binding MID00_11390 IPR036390 Winged helix DNA-binding domain superfamily MID00_11390 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11390 IPR000847 Transcription regulator HTH, LysR MID00_11395 IPR017850 Alkaline-phosphatase-like, core domain superfamily MID00_11395 IPR017767 Bacterial phospholipase C, phosphocholine-specific MID00_11395 IPR007312 Phosphoesterase MID00_11395 IPR008475 Bacterial phospholipase C, C-terminal domain MID00_11395 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_11415 IPR017871 ABC transporter, conserved site MID00_11415 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11415 IPR003593 AAA+ ATPase domain MID00_11415 IPR003439 ABC transporter-like MID00_11415 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_11420 IPR017871 ABC transporter, conserved site MID00_11420 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_11420 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11420 IPR003593 AAA+ ATPase domain MID00_11420 IPR003439 ABC transporter-like MID00_11430 IPR001851 ABC transporter, permease MID00_11435 IPR028082 Periplasmic binding protein-like I MID00_11435 IPR028081 Leucine-binding protein domain MID00_11450 IPR036390 Winged helix DNA-binding domain superfamily MID00_11450 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11450 IPR000847 Transcription regulator HTH, LysR MID00_11450 IPR005119 LysR, substrate-binding MID00_11455 IPR013785 Aldolase-type TIM barrel MID00_11455 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal MID00_11460 IPR020843 Polyketide synthase, enoylreductase domain MID00_11460 IPR036291 NAD(P)-binding domain superfamily MID00_11460 IPR011032 GroES-like superfamily MID00_11460 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 MID00_11460 IPR013154 Alcohol dehydrogenase, N-terminal MID00_11460 IPR013149 Alcohol dehydrogenase, C-terminal MID00_11460 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site MID00_11480 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_11480 IPR029045 ClpP/crotonase-like domain superfamily MID00_11480 IPR014748 Enoyl-CoA hydratase, C-terminal MID00_11480 IPR001753 Enoyl-CoA hydratase/isomerase MID00_11485 IPR023606 CoA-transferase family III domain superfamily MID00_11485 IPR003673 CoA-transferase family III MID00_11490 IPR013149 Alcohol dehydrogenase, C-terminal MID00_11490 IPR013154 Alcohol dehydrogenase, N-terminal MID00_11490 IPR011032 GroES-like superfamily MID00_11490 IPR036291 NAD(P)-binding domain superfamily MID00_11490 IPR020843 Polyketide synthase, enoylreductase domain MID00_11490 IPR014188 Acrylyl-CoA reductase AcuI MID00_11495 IPR005064 Bordetella uptake gene MID00_11495 IPR042100 Bordetella uptake gene, domain 1 MID00_11500 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain MID00_11500 IPR016102 Succinyl-CoA synthetase-like MID00_11500 IPR011761 ATP-grasp fold MID00_11500 IPR013815 ATP-grasp fold, subdomain 1 MID00_11500 IPR003781 CoA-binding MID00_11500 IPR036291 NAD(P)-binding domain superfamily MID00_11505 IPR014748 Enoyl-CoA hydratase, C-terminal MID00_11505 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_11505 IPR001753 Enoyl-CoA hydratase/isomerase MID00_11505 IPR029045 ClpP/crotonase-like domain superfamily MID00_11510 IPR010300 Cysteine dioxygenase type I MID00_11510 IPR014710 RmlC-like jelly roll fold MID00_11510 IPR011051 RmlC-like cupin domain superfamily MID00_11525 IPR036412 HAD-like superfamily MID00_11525 IPR003337 Trehalose-phosphatase MID00_11525 IPR023214 HAD superfamily MID00_11525 IPR006379 HAD-superfamily hydrolase, subfamily IIB MID00_11530 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_11530 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_11530 IPR036291 NAD(P)-binding domain superfamily MID00_11545 IPR001830 Glycosyl transferase, family 20 MID00_11545 IPR012766 Alpha,alpha-trehalose-phosphate synthase MID00_11550 IPR007046 RNA polymerase sigma factor 54, core-binding domain MID00_11550 IPR000394 RNA polymerase sigma factor 54 MID00_11550 IPR007634 RNA polymerase sigma factor 54, DNA-binding MID00_11550 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily MID00_11560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_11560 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_11560 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11560 IPR002197 DNA binding HTH domain, Fis-type MID00_11560 IPR025944 Sigma-54 interaction domain, conserved site MID00_11560 IPR003593 AAA+ ATPase domain MID00_11560 IPR003018 GAF domain MID00_11560 IPR029016 GAF-like domain superfamily MID00_11560 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_11560 IPR009057 Homeobox-like domain superfamily MID00_11565 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily MID00_11565 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain MID00_11590 IPR036873 Rhodanese-like domain superfamily MID00_11590 IPR020936 Uncharacterised protein family UPF0176 MID00_11590 IPR040503 UPF0176, acylphosphatase-like domain MID00_11590 IPR001763 Rhodanese-like domain MID00_11600 IPR036458 Sodium:dicarboxylate symporter superfamily MID00_11600 IPR023954 C4-dicarboxylate transport protein MID00_11600 IPR001991 Sodium:dicarboxylate symporter MID00_11600 IPR018107 Sodium:dicarboxylate symporter, conserved site MID00_11605 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) MID00_11605 IPR003594 Histidine kinase/HSP90-like ATPase MID00_11605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_11605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_11605 IPR005467 Histidine kinase domain MID00_11605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_11605 IPR029151 Periplasmic sensor-like domain superfamily MID00_11605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_11605 IPR033479 Double Cache domain 1 MID00_11610 IPR025944 Sigma-54 interaction domain, conserved site MID00_11610 IPR003593 AAA+ ATPase domain MID00_11610 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_11610 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_11610 IPR001789 Signal transduction response regulator, receiver domain MID00_11610 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11610 IPR002197 DNA binding HTH domain, Fis-type MID00_11610 IPR009057 Homeobox-like domain superfamily MID00_11610 IPR011006 CheY-like superfamily MID00_11610 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_11615 IPR036291 NAD(P)-binding domain superfamily MID00_11615 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_11615 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) MID00_11620 IPR008258 Transglycosylase SLT domain 1 MID00_11620 IPR018392 LysM domain MID00_11620 IPR000189 Prokaryotic transglycosylase, active site MID00_11620 IPR036779 LysM domain superfamily MID00_11620 IPR023346 Lysozyme-like domain superfamily MID00_11625 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain MID00_11625 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain MID00_11625 IPR017782 Hydroxyacylglutathione hydrolase MID00_11625 IPR001279 Metallo-beta-lactamase MID00_11625 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_11630 IPR026669 Arsenite methyltransferase-like MID00_11630 IPR013216 Methyltransferase type 11 MID00_11630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_11635 IPR022892 Ribonuclease HI MID00_11635 IPR036397 Ribonuclease H superfamily MID00_11635 IPR012337 Ribonuclease H-like superfamily MID00_11635 IPR002156 Ribonuclease H domain MID00_11640 IPR022824 Multidrug resistance protein MdtA MID00_11640 IPR006143 RND efflux pump, membrane fusion protein MID00_11640 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_11645 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_11645 IPR001036 Acriflavin resistance protein MID00_11650 IPR036397 Ribonuclease H superfamily MID00_11650 IPR012337 Ribonuclease H-like superfamily MID00_11650 IPR006309 DNA polymerase 3, epsilon subunit MID00_11650 IPR013520 Exonuclease, RNase T/DNA polymerase III MID00_11650 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain MID00_11660 IPR006161 Conserved hypothetical protein CHP00336 MID00_11660 IPR006160 Short chain fatty acid transporter AtoE MID00_11665 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_11665 IPR010916 TonB box, conserved site MID00_11665 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_11665 IPR012910 TonB-dependent receptor, plug domain MID00_11665 IPR039426 Vitamin B12 transporter BtuB-like MID00_11665 IPR010101 TonB-dependent vitamin B12 transporter BtuB MID00_11665 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_11675 IPR037294 ABC transporter, BtuC-like MID00_11675 IPR000522 ABC transporter, permease protein, BtuC-like MID00_11680 IPR003439 ABC transporter-like MID00_11680 IPR017871 ABC transporter, conserved site MID00_11680 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11680 IPR003593 AAA+ ATPase domain MID00_11685 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11685 IPR036390 Winged helix DNA-binding domain superfamily MID00_11685 IPR000835 MarR-type HTH domain MID00_11685 IPR023187 Transcriptional regulator MarR-type, conserved site MID00_11695 IPR000073 Alpha/beta hydrolase fold-1 MID00_11695 IPR029058 Alpha/Beta hydrolase fold MID00_11705 IPR000868 Isochorismatase-like MID00_11705 IPR036380 Isochorismatase-like superfamily MID00_11715 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit MID00_11715 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain MID00_11715 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_11715 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_11715 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site MID00_11720 IPR028202 Reductase, C-terminal MID00_11720 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_11720 IPR023753 FAD/NAD(P)-binding domain MID00_11720 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_11725 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_11725 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_11730 IPR038404 TRAP transporter solute receptor DctP superfamily MID00_11730 IPR041722 Alpha-keto acid binding periplasmic protein MID00_11730 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_11730 IPR026289 Solute binding protein, TakP-like MID00_11730 IPR018389 TRAP transporter solute receptor DctP/TeaA MID00_11735 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding MID00_11735 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily MID00_11735 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead MID00_11735 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily MID00_11740 IPR005107 CO dehydrogenase flavoprotein, C-terminal MID00_11740 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily MID00_11740 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_11740 IPR002346 Molybdopterin dehydrogenase, FAD-binding MID00_11740 IPR036318 FAD-binding, type PCMH-like superfamily MID00_11740 IPR016167 FAD-binding, type PCMH, subdomain 1 MID00_11740 IPR016166 FAD-binding domain, PCMH-type MID00_11745 IPR012675 Beta-grasp domain superfamily MID00_11745 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_11745 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_11745 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_11745 IPR036884 [2Fe-2S]-binding domain superfamily MID00_11745 IPR002888 [2Fe-2S]-binding MID00_11755 IPR003593 AAA+ ATPase domain MID00_11755 IPR003439 ABC transporter-like MID00_11755 IPR017871 ABC transporter, conserved site MID00_11755 IPR015859 ABC transporter, taurine import, TauD MID00_11755 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11760 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_11760 IPR035906 MetI-like superfamily MID00_11770 IPR004681 TRAP transporter large membrane protein DctM MID00_11770 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_11775 IPR027051 XdhC Rossmann domain MID00_11775 IPR003777 XdhC- CoxI MID00_11775 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family MID00_11780 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr MID00_11780 IPR036652 YjeF N-terminal domain superfamily MID00_11780 IPR004443 YjeF N-terminal domain MID00_11780 IPR029056 Ribokinase-like MID00_11780 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase MID00_11780 IPR017953 Carbohydrate kinase, predicted, conserved site MID00_11790 IPR001736 Phospholipase D/Transphosphatidylase MID00_11790 IPR025202 Phospholipase D-like domain MID00_11790 IPR030871 Cardiolipin synthase C MID00_11800 IPR011663 UbiC transcription regulator-associated MID00_11800 IPR000524 Transcription regulator HTH, GntR MID00_11800 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MID00_11800 IPR036390 Winged helix DNA-binding domain superfamily MID00_11800 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11805 IPR001279 Metallo-beta-lactamase MID00_11805 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_11805 IPR013471 Ribonuclease Z/BN MID00_11820 IPR005064 Bordetella uptake gene MID00_11820 IPR042100 Bordetella uptake gene, domain 1 MID00_11825 IPR032506 Domain of unknown function DUF4976 MID00_11825 IPR017850 Alkaline-phosphatase-like, core domain superfamily MID00_11825 IPR000917 Sulfatase, N-terminal MID00_11825 IPR024607 Sulfatase, conserved site MID00_11830 IPR036390 Winged helix DNA-binding domain superfamily MID00_11830 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_11830 IPR000847 Transcription regulator HTH, LysR MID00_11830 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain MID00_11830 IPR005119 LysR, substrate-binding MID00_11835 IPR029787 Nucleotide cyclase MID00_11835 IPR033424 Membrane-associated sensor domain MID00_11835 IPR000160 GGDEF domain MID00_11840 IPR033813 Penicillin G acylase, C-terminal MID00_11840 IPR023343 Penicillin amidase type, domain 1 MID00_11840 IPR014395 Penicillin/GL-7-ACA/AHL acylase MID00_11840 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase MID00_11840 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_11850 IPR028082 Periplasmic binding protein-like I MID00_11850 IPR000709 Leu/Ile/Val-binding protein MID00_11850 IPR028081 Leucine-binding protein domain MID00_11860 IPR003593 AAA+ ATPase domain MID00_11860 IPR017871 ABC transporter, conserved site MID00_11860 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11860 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_11860 IPR003439 ABC transporter-like MID00_11865 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_11865 IPR003439 ABC transporter-like MID00_11865 IPR017871 ABC transporter, conserved site MID00_11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11865 IPR003593 AAA+ ATPase domain MID00_11875 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding MID00_11875 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily MID00_11875 IPR009056 Cytochrome c-like domain MID00_11875 IPR036909 Cytochrome c-like domain superfamily MID00_11875 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily MID00_11875 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead MID00_11880 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_11880 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_11880 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_11880 IPR012675 Beta-grasp domain superfamily MID00_11880 IPR036884 [2Fe-2S]-binding domain superfamily MID00_11880 IPR002888 [2Fe-2S]-binding MID00_11885 IPR036909 Cytochrome c-like domain superfamily MID00_11885 IPR009056 Cytochrome c-like domain MID00_11885 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily MID00_11885 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding MID00_11885 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily MID00_11885 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead MID00_11890 IPR000073 Alpha/beta hydrolase fold-1 MID00_11890 IPR029058 Alpha/Beta hydrolase fold MID00_11900 IPR036380 Isochorismatase-like superfamily MID00_11900 IPR000868 Isochorismatase-like MID00_11920 IPR025877 MobA-like NTP transferase MID00_11920 IPR029044 Nucleotide-diphospho-sugar transferases MID00_11925 IPR009875 PilZ domain MID00_11925 IPR023787 Type III secretion system flagellar brake protein YcgR MID00_11925 IPR012349 FMN-binding split barrel MID00_11925 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal MID00_11930 IPR023401 Ornithine cyclodeaminase, N-terminal MID00_11930 IPR003462 Ornithine cyclodeaminase/mu-crystallin MID00_11930 IPR036291 NAD(P)-binding domain superfamily MID00_11940 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase MID00_11940 IPR015424 Pyridoxal phosphate-dependent transferase MID00_11940 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_11940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_11940 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme MID00_11955 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_11955 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_11960 IPR004821 Cytidyltransferase-like domain MID00_11960 IPR001980 Phosphopantetheine adenylyltransferase MID00_11960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_11965 IPR002052 DNA methylase, N-6 adenine-specific, conserved site MID00_11965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_11965 IPR004398 RNA methyltransferase, RsmD MID00_11970 IPR004390 Signal-recognition particle receptor FtsY MID00_11970 IPR036225 SRP/SRP receptor, N-terminal MID00_11970 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_11970 IPR003593 AAA+ ATPase domain MID00_11970 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain MID00_11970 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily MID00_11970 IPR013822 Signal recognition particle SRP54, helical bundle MID00_11985 IPR036144 RibA-like superfamily MID00_11985 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily MID00_11985 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB MID00_11985 IPR032677 GTP cyclohydrolase II MID00_11990 IPR036467 Lumazine/riboflavin synthase superfamily MID00_11990 IPR034964 Lumazine synthase MID00_11990 IPR002180 Lumazine/riboflavin synthase MID00_11995 IPR006027 NusB/RsmB/TIM44 MID00_11995 IPR011605 NusB antitermination factor MID00_11995 IPR035926 NusB-like superfamily MID00_12000 IPR006283 Thiamine-monophosphate kinase MID00_12000 IPR036921 PurM-like, N-terminal domain superfamily MID00_12000 IPR016188 PurM-like, N-terminal domain MID00_12000 IPR036676 PurM-like, C-terminal domain superfamily MID00_12000 IPR010918 PurM-like, C-terminal domain MID00_12005 IPR007686 YutG/PgpA domain MID00_12005 IPR036681 PgpA-like superfamily MID00_12005 IPR026037 Phosphatidylglycerophosphatase A MID00_12010 IPR036653 CinA-like, C-terminal MID00_12010 IPR008136 CinA, C-terminal MID00_12015 IPR036390 Winged helix DNA-binding domain superfamily MID00_12015 IPR005471 Transcription regulator IclR, N-terminal MID00_12015 IPR014757 Transcription regulator IclR, C-terminal MID00_12015 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR MID00_12015 IPR029016 GAF-like domain superfamily MID00_12015 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12020 IPR042100 Bordetella uptake gene, domain 1 MID00_12020 IPR005064 Bordetella uptake gene MID00_12025 IPR023606 CoA-transferase family III domain superfamily MID00_12025 IPR003673 CoA-transferase family III MID00_12030 IPR001754 Orotidine 5'-phosphate decarboxylase domain MID00_12030 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 MID00_12030 IPR018089 Orotidine 5'-phosphate decarboxylase, active site MID00_12030 IPR013785 Aldolase-type TIM barrel MID00_12030 IPR011060 Ribulose-phosphate binding barrel MID00_12035 IPR036945 Diacylglycerol kinase (DAGK) superfamily MID00_12035 IPR033718 Diacylglycerol kinase, prokaryotic MID00_12035 IPR000829 DAGK family MID00_12040 IPR027409 GroEL-like apical domain superfamily MID00_12040 IPR027413 GroEL-like equatorial domain superfamily MID00_12040 IPR027410 TCP-1-like chaperonin intermediate domain superfamily MID00_12040 IPR002423 Chaperonin Cpn60/TCP-1 family MID00_12040 IPR001844 Chaperonin Cpn60 MID00_12040 IPR018370 Chaperonin Cpn60, conserved site MID00_12045 IPR020818 GroES chaperonin family MID00_12045 IPR037124 GroES chaperonin superfamily MID00_12045 IPR018369 Chaperonin GroES, conserved site MID00_12045 IPR011032 GroES-like superfamily MID00_12060 IPR036928 Amidase signature (AS) superfamily MID00_12060 IPR023631 Amidase signature domain MID00_12060 IPR020556 Amidase, conserved site MID00_12060 IPR000120 Amidase MID00_12065 IPR033424 Membrane-associated sensor domain MID00_12065 IPR029787 Nucleotide cyclase MID00_12065 IPR000160 GGDEF domain MID00_12075 IPR012093 Pirin MID00_12075 IPR003829 Pirin, N-terminal domain MID00_12075 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain MID00_12075 IPR014710 RmlC-like jelly roll fold MID00_12075 IPR011051 RmlC-like cupin domain superfamily MID00_12080 IPR036390 Winged helix DNA-binding domain superfamily MID00_12080 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12080 IPR005119 LysR, substrate-binding MID00_12080 IPR000847 Transcription regulator HTH, LysR MID00_12090 IPR002505 Phosphate acetyl/butaryl transferase MID00_12090 IPR012147 Phosphate acetyl/butyryltransferase MID00_12095 IPR004372 Acetate/propionate kinase MID00_12095 IPR000890 Aliphatic acid kinase, short-chain MID00_12095 IPR023865 Aliphatic acid kinase, short-chain, conserved site MID00_12100 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12100 IPR036390 Winged helix DNA-binding domain superfamily MID00_12100 IPR000847 Transcription regulator HTH, LysR MID00_12100 IPR005119 LysR, substrate-binding MID00_12105 IPR009770 Domain of unknown function DUF1338 MID00_12110 IPR006076 FAD dependent oxidoreductase MID00_12110 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_12115 IPR010102 Succinate semialdehyde dehydrogenase MID00_12115 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent MID00_12115 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_12115 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_12115 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_12115 IPR016161 Aldehyde/histidinol dehydrogenase MID00_12115 IPR015590 Aldehyde dehydrogenase domain MID00_12120 IPR004841 Amino acid permease/ SLC12A domain MID00_12120 IPR011265 GABA permease MID00_12120 IPR004840 Amino acid permease, conserved site MID00_12125 IPR002891 Adenylyl-sulfate kinase MID00_12125 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain MID00_12125 IPR031157 Tr-type G domain, conserved site MID00_12125 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_12125 IPR011779 Sulphate adenylyltransferase, large subunit MID00_12125 IPR000795 Transcription factor, GTP-binding domain MID00_12125 IPR009000 Translation protein, beta-barrel domain superfamily MID00_12125 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MID00_12130 IPR011784 Sulphate adenylyltransferase, small subunit MID00_12130 IPR002500 Phosphoadenosine phosphosulphate reductase MID00_12130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_12135 IPR002500 Phosphoadenosine phosphosulphate reductase MID00_12135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_12135 IPR011798 Adenosine 5'-phosphosulphate reductase MID00_12135 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase MID00_12140 IPR000620 EamA domain MID00_12145 IPR004839 Aminotransferase, class I/classII MID00_12145 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_12145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12150 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_12150 IPR036249 Thioredoxin-like superfamily MID00_12150 IPR017559 Alkyl hydroperoxide reductase subunit C MID00_12150 IPR024706 Peroxiredoxin, AhpC-type MID00_12150 IPR019479 Peroxiredoxin, C-terminal MID00_12150 IPR013766 Thioredoxin domain MID00_12155 IPR012081 Alkyl hydroperoxide reductase subunit F MID00_12155 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_12155 IPR023753 FAD/NAD(P)-binding domain MID00_12155 IPR002109 Glutaredoxin MID00_12155 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site MID00_12155 IPR012336 Thioredoxin-like fold MID00_12155 IPR036249 Thioredoxin-like superfamily MID00_12160 IPR005119 LysR, substrate-binding MID00_12160 IPR000847 Transcription regulator HTH, LysR MID00_12160 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12160 IPR036390 Winged helix DNA-binding domain superfamily MID00_12165 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain MID00_12165 IPR017821 Succinate CoA transferase MID00_12165 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily MID00_12165 IPR003702 Acetyl-CoA hydrolase/transferase MID00_12165 IPR037171 NagB/RpiA transferase-like MID00_12170 IPR004778 Homoserine/Threonine efflux protein MID00_12170 IPR001123 Amino acid exporter protein, LeuE-type MID00_12175 IPR036291 NAD(P)-binding domain superfamily MID00_12175 IPR010190 Diaminopimelate dehydrogenase, Ddh MID00_12175 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal MID00_12175 IPR000846 Dihydrodipicolinate reductase, N-terminal MID00_12185 IPR003439 ABC transporter-like MID00_12185 IPR017871 ABC transporter, conserved site MID00_12185 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_12185 IPR003593 AAA+ ATPase domain MID00_12190 IPR002229 Blood group Rhesus C/E/D polypeptide MID00_12190 IPR001851 ABC transporter, permease MID00_12195 IPR001851 ABC transporter, permease MID00_12200 IPR003760 ABC transporter substrate-binding protein PnrA-like MID00_12205 IPR002528 Multi antimicrobial extrusion protein MID00_12220 IPR000073 Alpha/beta hydrolase fold-1 MID00_12220 IPR000639 Epoxide hydrolase-like MID00_12220 IPR029058 Alpha/Beta hydrolase fold MID00_12230 IPR006690 Outer membrane protein, OmpA-like, conserved site MID00_12230 IPR006664 Outer membrane protein, bacterial MID00_12230 IPR006665 OmpA-like domain MID00_12230 IPR036737 OmpA-like domain superfamily MID00_12230 IPR039001 Peptidoglycan-associated lipoprotein MID00_12230 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal MID00_12235 IPR007195 TolB, N-terminal MID00_12235 IPR036752 TolB, N-terminal domain superfamily MID00_12235 IPR011659 WD40-like Beta Propeller MID00_12235 IPR011042 Six-bladed beta-propeller, TolB-like MID00_12235 IPR014167 Tol-Pal system protein TolB MID00_12245 IPR003400 Biopolymer transport protein ExbD/TolR MID00_12245 IPR014168 Tol-Pal system protein TolR MID00_12250 IPR002898 MotA/TolQ/ExbB proton channel MID00_12250 IPR014163 Tol-Pal system, TolQ MID00_12255 IPR006683 Thioesterase domain MID00_12255 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase MID00_12255 IPR029069 HotDog domain superfamily MID00_12255 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site MID00_12255 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family MID00_12260 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain MID00_12260 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily MID00_12260 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type MID00_12260 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 MID00_12260 IPR002316 Proline-tRNA ligase, class IIa MID00_12260 IPR036621 Anticodon-binding domain superfamily MID00_12260 IPR004154 Anticodon-binding MID00_12260 IPR006195 Aminoacyl-tRNA synthetase, class II MID00_12260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) MID00_12260 IPR033730 Prokaryote proline-tRNA ligase core domain MID00_12265 IPR000086 NUDIX hydrolase domain MID00_12265 IPR020476 NUDIX hydrolase MID00_12265 IPR015797 NUDIX hydrolase-like domain superfamily MID00_12265 IPR022927 RNA pyrophosphohydrolase RppH MID00_12265 IPR020084 NUDIX hydrolase, conserved site MID00_12270 IPR039420 Transcriptional regulatory protein WalR-like MID00_12270 IPR001789 Signal transduction response regulator, receiver domain MID00_12270 IPR016032 Signal transduction response regulator, C-terminal effector MID00_12270 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_12270 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12270 IPR011006 CheY-like superfamily MID00_12275 IPR005467 Histidine kinase domain MID00_12275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_12275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_12275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_12275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_12275 IPR003594 Histidine kinase/HSP90-like ATPase MID00_12280 IPR036291 NAD(P)-binding domain superfamily MID00_12280 IPR015815 3-hydroxyisobutyrate dehydrogenase-related MID00_12280 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding MID00_12280 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_12280 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_12280 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site MID00_12280 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain MID00_12285 IPR026045 Ferric binding protein MID00_12285 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_12290 IPR003593 AAA+ ATPase domain MID00_12290 IPR017871 ABC transporter, conserved site MID00_12290 IPR015853 ABC transporter, ferric cation import, FbpC MID00_12290 IPR008995 Molybdate/tungstate binding, C-terminal MID00_12290 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_12290 IPR013611 Transport-associated OB, type 2 MID00_12290 IPR003439 ABC transporter-like MID00_12295 IPR035906 MetI-like superfamily MID00_12295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_12300 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 MID00_12300 IPR006076 FAD dependent oxidoreductase MID00_12300 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_12300 IPR032503 FAD dependent oxidoreductase, central domain MID00_12300 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain MID00_12300 IPR006222 Aminomethyltransferase, folate-binding domain MID00_12300 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal MID00_12305 IPR002823 Protein of unknown function DUF112, transmembrane MID00_12330 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt MID00_12335 IPR002324 Cytochrome c, class ID MID00_12335 IPR036909 Cytochrome c-like domain superfamily MID00_12335 IPR009056 Cytochrome c-like domain MID00_12340 IPR002569 Peptide methionine sulphoxide reductase MsrA MID00_12340 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily MID00_12355 IPR007272 Sulphur transport domain MID00_12360 IPR036873 Rhodanese-like domain superfamily MID00_12360 IPR001763 Rhodanese-like domain MID00_12360 IPR001307 Thiosulphate sulfurtransferase, conserved site MID00_12405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_12405 IPR006050 DNA photolyase, N-terminal MID00_12405 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal MID00_12405 IPR002081 Cryptochrome/DNA photolyase class 1 MID00_12405 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain MID00_12405 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily MID00_12405 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily MID00_12405 IPR019947 DNA photolyase class 1, 8-HDF type MID00_12415 IPR004721 Dihydroorotase homodimeric type MID00_12415 IPR002195 Dihydroorotase, conserved site MID00_12415 IPR032466 Metal-dependent hydrolase MID00_12415 IPR006680 Amidohydrolase-related MID00_12425 IPR036390 Winged helix DNA-binding domain superfamily MID00_12425 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_12425 IPR003593 AAA+ ATPase domain MID00_12425 IPR041445 RuvB, AAA lid domain MID00_12425 IPR004605 DNA helicase, Holliday junction RuvB-type MID00_12425 IPR008824 RuvB-like P-loop domain MID00_12425 IPR008823 RuvB C-terminal winged helix domain MID00_12425 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12430 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_12430 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site MID00_12430 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_12435 IPR011114 Holliday junction DNA helicase RuvA, C-terminal MID00_12435 IPR010994 RuvA domain 2-like MID00_12435 IPR000085 Bacterial DNA recombination protein RuvA MID00_12435 IPR012340 Nucleic acid-binding, OB-fold MID00_12435 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 MID00_12435 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial MID00_12435 IPR036267 RuvA, C-terminal domain superfamily MID00_12440 IPR012337 Ribonuclease H-like superfamily MID00_12440 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site MID00_12440 IPR002176 Crossover junction endodeoxyribonuclease RuvC MID00_12440 IPR036397 Ribonuclease H superfamily MID00_12445 IPR002695 Bifunctional purine biosynthesis protein PurH-like MID00_12445 IPR036914 Methylglyoxal synthase-like domain superfamily MID00_12445 IPR016193 Cytidine deaminase-like MID00_12445 IPR024051 AICAR transformylase, duplicated domain superfamily MID00_12445 IPR011607 Methylglyoxal synthase-like domain MID00_12450 IPR005412 DNA-binding protein Fis MID00_12450 IPR009057 Homeobox-like domain superfamily MID00_12450 IPR002197 DNA binding HTH domain, Fis-type MID00_12455 IPR013785 Aldolase-type TIM barrel MID00_12455 IPR035587 DUS-like, FMN-binding domain MID00_12455 IPR032887 tRNA-dihydrouridine synthase B MID00_12455 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal MID00_12455 IPR018517 tRNA-dihydrouridine synthase, conserved site MID00_12455 IPR001269 tRNA-dihydrouridine synthase MID00_12455 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 MID00_12460 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase MID00_12460 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 MID00_12460 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_12460 IPR002938 FAD-binding domain MID00_12460 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site MID00_12480 IPR030873 Beta-barrel assembly-enhancing protease MID00_12480 IPR001915 Peptidase M48 MID00_12480 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_12485 IPR029058 Alpha/Beta hydrolase fold MID00_12485 IPR000073 Alpha/beta hydrolase fold-1 MID00_12485 IPR000952 AB hydrolase 4, conserved site MID00_12485 IPR012020 AB hydrolase 4 family MID00_12505 IPR001650 Helicase, C-terminal MID00_12505 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_12505 IPR028622 ATP-dependent RNA helicase RhlE MID00_12505 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_12505 IPR011545 DEAD/DEAH box helicase domain MID00_12505 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MID00_12505 IPR014014 RNA helicase, DEAD-box type, Q motif MID00_12525 IPR005471 Transcription regulator IclR, N-terminal MID00_12525 IPR014757 Transcription regulator IclR, C-terminal MID00_12525 IPR029016 GAF-like domain superfamily MID00_12525 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12525 IPR036390 Winged helix DNA-binding domain superfamily MID00_12540 IPR013785 Aldolase-type TIM barrel MID00_12540 IPR005720 Dihydroorotate dehydrogenase domain MID00_12540 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 MID00_12540 IPR005719 Dihydroorotate dehydrogenase, class 2 MID00_12540 IPR001295 Dihydroorotate dehydrogenase, conserved site MID00_12545 IPR007471 N-end aminoacyl transferase, N-terminal MID00_12545 IPR030700 N-end rule aminoacyl transferase MID00_12545 IPR007472 N-end rule aminoacyl transferase, C-terminal MID00_12545 IPR017138 Aspartate/glutamate leucyltransferase MID00_12545 IPR016181 Acyl-CoA N-acyltransferase MID00_12550 IPR016181 Acyl-CoA N-acyltransferase MID00_12550 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase MID00_12550 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal MID00_12565 IPR000835 MarR-type HTH domain MID00_12565 IPR023187 Transcriptional regulator MarR-type, conserved site MID00_12565 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12565 IPR036390 Winged helix DNA-binding domain superfamily MID00_12570 IPR018951 Fumarase C, C-terminal MID00_12570 IPR024083 Fumarase/histidase, N-terminal MID00_12570 IPR004708 Aspartate ammonia-lyase MID00_12570 IPR020557 Fumarate lyase, conserved site MID00_12570 IPR000362 Fumarate lyase family MID00_12570 IPR008948 L-Aspartase-like MID00_12570 IPR022761 Fumarate lyase, N-terminal MID00_12580 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MID00_12580 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal MID00_12580 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal MID00_12580 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MID00_12580 IPR037523 Vicinal oxygen chelate (VOC) domain MID00_12580 IPR005956 4-hydroxyphenylpyruvate dioxygenase MID00_12585 IPR001093 IMP dehydrogenase/GMP reductase MID00_12585 IPR013785 Aldolase-type TIM barrel MID00_12585 IPR000644 CBS domain MID00_12585 IPR005990 Inosine-5'-monophosphate dehydrogenase MID00_12585 IPR015875 IMP dehydrogenase / GMP reductase, conserved site MID00_12595 IPR010054 General secretion pathway protein G MID00_12595 IPR013545 Type II secretion system protein G MID00_12595 IPR012902 Prokaryotic N-terminal methylation site MID00_12595 IPR000983 Bacterial general secretion pathway protein G-type pilin MID00_12610 IPR010055 Type II secretion system protein J MID00_12610 IPR012902 Prokaryotic N-terminal methylation site MID00_12635 IPR013356 Type II secretion system GspD MID00_12635 IPR004846 Type II/III secretion system MID00_12635 IPR038591 NolW-like superfamily MID00_12635 IPR001775 GspD/PilQ family MID00_12635 IPR005644 NolW-like MID00_12635 IPR004845 Type II secretion system GspD, conserved site MID00_12640 IPR001482 Type II/IV secretion system protein MID00_12640 IPR037257 General secretory system II, protein E, N-terminal superfamily MID00_12640 IPR013369 Type II secretion system GspE MID00_12640 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_12640 IPR003593 AAA+ ATPase domain MID00_12645 IPR003004 GspF/PilC family MID00_12645 IPR011850 General secretion pathway protein F MID00_12645 IPR001992 Type II secretion system conserved site MID00_12645 IPR018076 Type II secretion system F domain MID00_12645 IPR042094 Type II secretion system F domain superfamily MID00_12650 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily MID00_12650 IPR006119 Resolvase, N-terminal catalytic domain MID00_12650 IPR009057 Homeobox-like domain superfamily MID00_12650 IPR006118 Recombinase, conserved site MID00_12650 IPR006120 Resolvase, HTH domain MID00_12660 IPR008635 Coiled stalk of trimeric autotransporter adhesin MID00_12660 IPR028230 Trimeric autotransporter adhesin, tryptophan-ring motif MID00_12660 IPR037174 Trimeric adhesin MID00_12660 IPR005594 YadA-like, C-terminal MID00_12660 IPR024973 ESPR domain MID00_12665 IPR000498 Outer membrane protein OmpA-like, transmembrane domain MID00_12665 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel MID00_12665 IPR006664 Outer membrane protein, bacterial MID00_12665 IPR002368 Outer membrane protein, OmpA MID00_12665 IPR006665 OmpA-like domain MID00_12665 IPR006690 Outer membrane protein, OmpA-like, conserved site MID00_12665 IPR036737 OmpA-like domain superfamily MID00_12680 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_12680 IPR007312 Phosphoesterase MID00_12680 IPR017850 Alkaline-phosphatase-like, core domain superfamily MID00_12680 IPR017767 Bacterial phospholipase C, phosphocholine-specific MID00_12680 IPR008475 Bacterial phospholipase C, C-terminal domain MID00_12700 IPR004391 Glutamate racemase MID00_12700 IPR018187 Asp/Glu racemase, active site 1 MID00_12700 IPR001920 Asp/Glu racemase MID00_12700 IPR015942 Asp/Glu/hydantoin racemase MID00_12700 IPR033134 Asp/Glu racemase, active site 2 MID00_12705 IPR005814 Aminotransferase class-III MID00_12705 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_12705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12710 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12710 IPR000847 Transcription regulator HTH, LysR MID00_12710 IPR036390 Winged helix DNA-binding domain superfamily MID00_12710 IPR005119 LysR, substrate-binding MID00_12720 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12720 IPR000524 Transcription regulator HTH, GntR MID00_12720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12720 IPR004839 Aminotransferase, class I/classII MID00_12720 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_12720 IPR036390 Winged helix DNA-binding domain superfamily MID00_12725 IPR023616 Cytochrome c oxidase-like, subunit I domain MID00_12725 IPR004677 Cytochrome c oxidase cbb3-type, subunit I MID00_12725 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site MID00_12725 IPR000883 Cytochrome c oxidase subunit I MID00_12725 IPR036927 Cytochrome c oxidase-like, subunit I superfamily MID00_12745 IPR003211 AmiS/UreI transporter MID00_12745 IPR038523 AmiS/UreI transporter superfamily MID00_12750 IPR039570 AmiC, periplasmic binding domain MID00_12750 IPR000709 Leu/Ile/Val-binding protein MID00_12750 IPR028082 Periplasmic binding protein-like I MID00_12770 IPR001036 Acriflavin resistance protein MID00_12770 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_12780 IPR010211 Redox-sensitive transcriptional activator SoxR MID00_12780 IPR015358 Transcription regulator MerR, DNA binding MID00_12780 IPR000551 MerR-type HTH domain MID00_12780 IPR009061 Putative DNA-binding domain superfamily MID00_12785 IPR018093 BCCT transporter, conserved site MID00_12785 IPR000060 BCCT transporter family MID00_12790 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase MID00_12790 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase MID00_12790 IPR004625 Pyridoxine kinase MID00_12790 IPR029056 Ribokinase-like MID00_12795 IPR006274 Carbamoyl-phosphate synthase, small subunit MID00_12795 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain MID00_12795 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily MID00_12795 IPR029062 Class I glutamine amidotransferase-like MID00_12795 IPR017926 Glutamine amidotransferase MID00_12795 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain MID00_12810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_12810 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12810 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site MID00_12810 IPR039429 Serine hydroxymethyltransferase-like domain MID00_12810 IPR001085 Serine hydroxymethyltransferase MID00_12815 IPR004839 Aminotransferase, class I/classII MID00_12815 IPR000524 Transcription regulator HTH, GntR MID00_12815 IPR036390 Winged helix DNA-binding domain superfamily MID00_12815 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12815 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12820 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MID00_12820 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_12820 IPR022278 Phosphoserine aminotransferase MID00_12820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12820 IPR000192 Aminotransferase class V domain MID00_12825 IPR039429 Serine hydroxymethyltransferase-like domain MID00_12825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_12825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12825 IPR001085 Serine hydroxymethyltransferase MID00_12825 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site MID00_12825 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12840 IPR018317 Queuosine biosynthesis protein QueC MID00_12840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_12845 IPR003744 Queuosine precursor transporter MID00_12855 IPR000073 Alpha/beta hydrolase fold-1 MID00_12855 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I MID00_12855 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain MID00_12855 IPR029058 Alpha/Beta hydrolase fold MID00_12860 IPR003423 Outer membrane efflux protein MID00_12860 IPR010131 RND efflux system, outer membrane lipoprotein, NodT MID00_12865 IPR039562 Membrane fusion protein, biotin-lipoyl like domain MID00_12870 IPR003439 ABC transporter-like MID00_12870 IPR003593 AAA+ ATPase domain MID00_12870 IPR017871 ABC transporter, conserved site MID00_12870 IPR000412 ABC-2 transporter MID00_12870 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_12875 IPR000412 ABC-2 transporter MID00_12885 IPR011283 Acetoacetyl-CoA reductase MID00_12885 IPR036291 NAD(P)-binding domain superfamily MID00_12885 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_12885 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_12890 IPR020613 Thiolase, conserved site MID00_12890 IPR020617 Thiolase, C-terminal MID00_12890 IPR020616 Thiolase, N-terminal MID00_12890 IPR020610 Thiolase, active site MID00_12890 IPR020615 Thiolase, acyl-enzyme intermediate active site MID00_12890 IPR016039 Thiolase-like MID00_12890 IPR002155 Thiolase MID00_12895 IPR024501 Protein of unknown function DUF3141 MID00_12895 IPR029058 Alpha/Beta hydrolase fold MID00_12900 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_12900 IPR036291 NAD(P)-binding domain superfamily MID00_12900 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_12905 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_12905 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_12905 IPR036291 NAD(P)-binding domain superfamily MID00_12920 IPR036259 MFS transporter superfamily MID00_12920 IPR020846 Major facilitator superfamily domain MID00_12920 IPR011701 Major facilitator superfamily MID00_12925 IPR004839 Aminotransferase, class I/classII MID00_12925 IPR015424 Pyridoxal phosphate-dependent transferase MID00_12925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_12925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_12925 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12925 IPR036390 Winged helix DNA-binding domain superfamily MID00_12925 IPR000524 Transcription regulator HTH, GntR MID00_12930 IPR000120 Amidase MID00_12930 IPR036928 Amidase signature (AS) superfamily MID00_12930 IPR023631 Amidase signature domain MID00_12930 IPR020556 Amidase, conserved site MID00_12930 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit MID00_12950 IPR011006 CheY-like superfamily MID00_12950 IPR030864 Transcriptional regulatory protein RcsB MID00_12950 IPR016032 Signal transduction response regulator, C-terminal effector MID00_12950 IPR001789 Signal transduction response regulator, receiver domain MID00_12950 IPR000792 Transcription regulator LuxR, C-terminal MID00_12950 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_12955 IPR001789 Signal transduction response regulator, receiver domain MID00_12955 IPR011006 CheY-like superfamily MID00_12955 IPR003594 Histidine kinase/HSP90-like ATPase MID00_12955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_12955 IPR005467 Histidine kinase domain MID00_12955 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_12955 IPR030856 Sensor histidine kinase RcsC MID00_12955 IPR038388 RcsC, C-terminal domain superfamily MID00_12955 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal MID00_12955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_12955 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_12960 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_12960 IPR030856 Sensor histidine kinase RcsC MID00_12960 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal MID00_12960 IPR001789 Signal transduction response regulator, receiver domain MID00_12960 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_12960 IPR005467 Histidine kinase domain MID00_12960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_12960 IPR038388 RcsC, C-terminal domain superfamily MID00_12960 IPR011006 CheY-like superfamily MID00_12960 IPR003594 Histidine kinase/HSP90-like ATPase MID00_12960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_12965 IPR025949 PapC-like, C-terminal domain MID00_12965 IPR025885 PapC, N-terminal domain MID00_12965 IPR037224 PapC, N-terminal domain superfamily MID00_12965 IPR018030 Fimbrial membrane usher, conserved site MID00_12965 IPR000015 Outer membrane usher protein MID00_12965 IPR042186 Outer membrane usher protein FimD, plug domain MID00_12970 IPR013783 Immunoglobulin-like fold MID00_12970 IPR008962 PapD-like superfamily MID00_12970 IPR036316 Pili assembly chaperone, C-terminal domain superfamily MID00_12970 IPR016148 Pili assembly chaperone, C-terminal MID00_12970 IPR001829 Pili assembly chaperone, bacterial MID00_12970 IPR018046 Pili assembly chaperone, conserved site MID00_12970 IPR016147 Pili assembly chaperone, N-terminal MID00_12990 IPR020846 Major facilitator superfamily domain MID00_12990 IPR036259 MFS transporter superfamily MID00_12990 IPR005829 Sugar transporter, conserved site MID00_12990 IPR011701 Major facilitator superfamily MID00_12995 IPR017629 4-hydroxy-2-oxovalerate aldolase MID00_12995 IPR013785 Aldolase-type TIM barrel MID00_12995 IPR012425 DmpG-like communication MID00_12995 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain MID00_12995 IPR000891 Pyruvate carboxyltransferase MID00_13000 IPR015426 Acetaldehyde dehydrogenase, C-terminal MID00_13000 IPR036291 NAD(P)-binding domain superfamily MID00_13000 IPR000534 Semialdehyde dehydrogenase, NAD-binding MID00_13000 IPR003361 Acetaldehyde dehydrogenase MID00_13005 IPR023793 2-keto-4-pentenoate hydratase MID00_13005 IPR011234 Fumarylacetoacetase-like, C-terminal MID00_13005 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily MID00_13010 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase MID00_13010 IPR000639 Epoxide hydrolase-like MID00_13010 IPR000073 Alpha/beta hydrolase fold-1 MID00_13010 IPR029058 Alpha/Beta hydrolase fold MID00_13015 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B MID00_13015 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase MID00_13020 IPR028202 Reductase, C-terminal MID00_13020 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit MID00_13020 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_13020 IPR023753 FAD/NAD(P)-binding domain MID00_13020 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_13025 IPR023643 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase HcaB MID00_13025 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_13025 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_13025 IPR036291 NAD(P)-binding domain superfamily MID00_13030 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_13030 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_13030 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit MID00_13035 IPR000391 Ring-hydroxylating dioxygenase beta subunit MID00_13035 IPR032710 NTF2-like domain superfamily MID00_13035 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit MID00_13040 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit MID00_13040 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain MID00_13040 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site MID00_13040 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_13040 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit MID00_13040 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_13045 IPR036390 Winged helix DNA-binding domain superfamily MID00_13045 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_13045 IPR000847 Transcription regulator HTH, LysR MID00_13045 IPR005119 LysR, substrate-binding MID00_13055 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily MID00_13055 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MID00_13055 IPR001650 Helicase, C-terminal MID00_13055 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_13055 IPR028619 ATP-dependent RNA helicase DbpA MID00_13055 IPR011545 DEAD/DEAH box helicase domain MID00_13055 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain MID00_13055 IPR014014 RNA helicase, DEAD-box type, Q motif MID00_13055 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13060 IPR029016 GAF-like domain superfamily MID00_13060 IPR036390 Winged helix DNA-binding domain superfamily MID00_13060 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_13060 IPR005471 Transcription regulator IclR, N-terminal MID00_13060 IPR014757 Transcription regulator IclR, C-terminal MID00_13065 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_13065 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_13065 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_13065 IPR016161 Aldehyde/histidinol dehydrogenase MID00_13065 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_13065 IPR010102 Succinate semialdehyde dehydrogenase MID00_13065 IPR015590 Aldehyde dehydrogenase domain MID00_13075 IPR001851 ABC transporter, permease MID00_13085 IPR030921 LPS export ABC transporter, ATP-binding protein LptB MID00_13085 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13085 IPR017871 ABC transporter, conserved site MID00_13085 IPR003439 ABC transporter-like MID00_13085 IPR003593 AAA+ ATPase domain MID00_13090 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_13090 IPR003593 AAA+ ATPase domain MID00_13090 IPR003439 ABC transporter-like MID00_13090 IPR017871 ABC transporter, conserved site MID00_13090 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13095 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA MID00_13095 IPR018211 Alcohol dehydrogenase, iron-type, conserved site MID00_13095 IPR039697 Iron-type alcohol dehydrogenase-like MID00_13110 IPR025291 Protein of unknown function DUF4153 MID00_13115 IPR000801 Putative esterase MID00_13115 IPR029058 Alpha/Beta hydrolase fold MID00_13125 IPR004812 Drug resistance transporter Bcr/CmlA subfamily MID00_13125 IPR036259 MFS transporter superfamily MID00_13125 IPR020846 Major facilitator superfamily domain MID00_13125 IPR011701 Major facilitator superfamily MID00_13130 IPR010105 TonB-dependent siderophore receptor MID00_13130 IPR039423 TonB-dependent receptor-like MID00_13130 IPR011662 Secretin/TonB, short N-terminal domain MID00_13130 IPR010917 TonB-dependent receptor, conserved site MID00_13130 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_13130 IPR012910 TonB-dependent receptor, plug domain MID00_13130 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_13130 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_13155 IPR002912 ACT domain MID00_13155 IPR036412 HAD-like superfamily MID00_13155 IPR023190 Phosphoserine phosphatase, domain 2 MID00_13155 IPR023214 HAD superfamily MID00_13180 IPR039562 Membrane fusion protein, biotin-lipoyl like domain MID00_13185 IPR003423 Outer membrane efflux protein MID00_13185 IPR010131 RND efflux system, outer membrane lipoprotein, NodT MID00_13210 IPR025669 AAA domain MID00_13210 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13245 IPR000424 Primosome PriB/single-strand DNA-binding MID00_13245 IPR011344 Single-stranded DNA-binding protein MID00_13245 IPR012340 Nucleic acid-binding, OB-fold MID00_13250 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 MID00_13250 IPR023405 DNA topoisomerase, type IA, core domain MID00_13250 IPR003602 DNA topoisomerase, type IA, DNA-binding domain MID00_13250 IPR005738 DNA topoisomerase III MID00_13250 IPR003601 DNA topoisomerase, type IA, domain 2 MID00_13250 IPR034144 DNA topoisomerase 3-like, TOPRIM domain MID00_13250 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MID00_13250 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MID00_13250 IPR013497 DNA topoisomerase, type IA, central MID00_13250 IPR000380 DNA topoisomerase, type IA MID00_13250 IPR023406 DNA topoisomerase, type IA, active site MID00_13250 IPR006171 TOPRIM domain MID00_13255 IPR018117 DNA methylase, C-5 cytosine-specific, active site MID00_13255 IPR001525 C-5 cytosine methyltransferase MID00_13255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_13285 IPR004481 Sodium/potassium/calcium exchanger MID00_13285 IPR004837 Sodium/calcium exchanger membrane region MID00_13290 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB MID00_13290 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site MID00_13290 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA MID00_13460 IPR020891 Uncharacterised protein family UPF0758, conserved site MID00_13460 IPR037518 MPN domain MID00_13460 IPR025657 RadC-like JAB domain MID00_13460 IPR010994 RuvA domain 2-like MID00_13460 IPR001405 Uncharacterised protein family UPF0758 MID00_13510 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup MID00_13510 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit MID00_13510 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal MID00_13510 IPR025383 Domain of unknown function DUF4040 MID00_13510 IPR005663 Monovalent cation proton antiporter subunit A MID00_13515 IPR007182 Na+/H+ antiporter MnhB subunit-related protein MID00_13520 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like MID00_13520 IPR006673 Mnh complex subunit C1 MID00_13525 IPR003918 NADH:ubiquinone oxidoreductase MID00_13525 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit MID00_13530 IPR002758 Na+/H+ antiporter subunit E MID00_13540 IPR005133 Na+/H+ antiporter subunit G MID00_13545 IPR035965 PAS domain superfamily MID00_13545 IPR003660 HAMP domain MID00_13545 IPR003594 Histidine kinase/HSP90-like ATPase MID00_13545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_13545 IPR005467 Histidine kinase domain MID00_13545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_13545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_13545 IPR000014 PAS domain MID00_13545 IPR000700 PAS-associated, C-terminal MID00_13545 IPR013767 PAS fold MID00_13545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_13550 IPR009057 Homeobox-like domain superfamily MID00_13550 IPR025944 Sigma-54 interaction domain, conserved site MID00_13550 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_13550 IPR002197 DNA binding HTH domain, Fis-type MID00_13550 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_13550 IPR001789 Signal transduction response regulator, receiver domain MID00_13550 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13550 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_13550 IPR003593 AAA+ ATPase domain MID00_13550 IPR011006 CheY-like superfamily MID00_13555 IPR001872 Peptidase A8, signal peptidase II MID00_13560 IPR036390 Winged helix DNA-binding domain superfamily MID00_13560 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_13560 IPR000847 Transcription regulator HTH, LysR MID00_13560 IPR005119 LysR, substrate-binding MID00_13575 IPR002104 Integrase, catalytic domain MID00_13575 IPR038488 Integrase, DNA-binding domain superfamily MID00_13575 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_13575 IPR013762 Integrase-like, catalytic domain superfamily MID00_13575 IPR004107 Integrase, SAM-like, N-terminal MID00_13575 IPR010998 Integrase/recombinase, N-terminal MID00_13575 IPR025166 Integrase, DNA-binding domain MID00_13595 IPR016169 FAD-binding, type PCMH, subdomain 2 MID00_13595 IPR036318 FAD-binding, type PCMH-like superfamily MID00_13595 IPR016166 FAD-binding domain, PCMH-type MID00_13595 IPR016167 FAD-binding, type PCMH, subdomain 1 MID00_13595 IPR006094 FAD linked oxidase, N-terminal MID00_13595 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal MID00_13595 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily MID00_13595 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase MID00_13605 IPR020846 Major facilitator superfamily domain MID00_13605 IPR036259 MFS transporter superfamily MID00_13605 IPR005829 Sugar transporter, conserved site MID00_13605 IPR011701 Major facilitator superfamily MID00_13610 IPR039697 Iron-type alcohol dehydrogenase-like MID00_13610 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA MID00_13610 IPR018211 Alcohol dehydrogenase, iron-type, conserved site MID00_13615 IPR000639 Epoxide hydrolase-like MID00_13615 IPR000073 Alpha/beta hydrolase fold-1 MID00_13615 IPR029058 Alpha/Beta hydrolase fold MID00_13630 IPR000846 Dihydrodipicolinate reductase, N-terminal MID00_13630 IPR022664 Dihydrodipicolinate reductase, conserved site MID00_13630 IPR023940 Dihydrodipicolinate reductase MID00_13630 IPR036291 NAD(P)-binding domain superfamily MID00_13630 IPR022663 Dihydrodipicolinate reductase, C-terminal MID00_13635 IPR007450 Lipoprotein SmpA/OmlA MID00_13635 IPR026592 Outer membrane protein assembly factor BamE MID00_13635 IPR037873 BamE-like MID00_13640 IPR036390 Winged helix DNA-binding domain superfamily MID00_13640 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_13640 IPR002481 Ferric-uptake regulator MID00_13645 IPR003395 RecF/RecN/SMC, N-terminal MID00_13645 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13645 IPR004604 DNA recombination/repair protein RecN MID00_13650 IPR002504 NAD kinase MID00_13650 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal MID00_13650 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal MID00_13650 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily MID00_13655 IPR029016 GAF-like domain superfamily MID00_13655 IPR002571 Heat-inducible transcription repressor HrcA MID00_13655 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain MID00_13655 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal MID00_13655 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_13655 IPR036390 Winged helix DNA-binding domain superfamily MID00_13655 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily MID00_13660 IPR033659 Ferrochelatase, N-terminal MID00_13660 IPR033644 Ferrochelatase, C-terminal MID00_13660 IPR019772 Ferrochelatase, active site MID00_13660 IPR001015 Ferrochelatase MID00_13665 IPR013805 GrpE nucleotide exchange factor, coiled-coil MID00_13665 IPR009012 GrpE nucleotide exchange factor, head MID00_13665 IPR000740 GrpE nucleotide exchange factor MID00_13670 IPR013126 Heat shock protein 70 family MID00_13670 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily MID00_13670 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily MID00_13670 IPR012725 Chaperone DnaK MID00_13670 IPR018181 Heat shock protein 70, conserved site MID00_13675 IPR018253 DnaJ domain, conserved site MID00_13675 IPR036869 Chaperone J-domain superfamily MID00_13675 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily MID00_13675 IPR001305 Heat shock protein DnaJ, cysteine-rich domain MID00_13675 IPR008971 HSP40/DnaJ peptide-binding MID00_13675 IPR001623 DnaJ domain MID00_13675 IPR002939 Chaperone DnaJ, C-terminal MID00_13675 IPR012724 Chaperone DnaJ MID00_13680 IPR011765 Peptidase M16, N-terminal MID00_13680 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like MID00_13680 IPR007863 Peptidase M16, C-terminal MID00_13680 IPR001431 Peptidase M16, zinc-binding site MID00_13710 IPR013686 Polypeptide-transport-associated, ShlB-type MID00_13710 IPR005565 Haemolysin activator HlyB, C-terminal MID00_13710 IPR034746 POTRA domain MID00_13740 IPR007055 BON domain MID00_13740 IPR001775 GspD/PilQ family MID00_13740 IPR032789 Pilus formation protein, N-terminal MID00_13740 IPR004846 Type II/III secretion system MID00_13740 IPR014004 Transport-associated and nodulation domain, bacteria MID00_13750 IPR001482 Type II/IV secretion system protein MID00_13750 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13750 IPR022399 Helicase/secretion neighbourhood ATPase MID00_13780 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13780 IPR003593 AAA+ ATPase domain MID00_13780 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_13780 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_13780 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_13780 IPR001789 Signal transduction response regulator, receiver domain MID00_13780 IPR011006 CheY-like superfamily MID00_13780 IPR009057 Homeobox-like domain superfamily MID00_13780 IPR002197 DNA binding HTH domain, Fis-type MID00_13780 IPR025944 Sigma-54 interaction domain, conserved site MID00_13800 IPR003960 ATPase, AAA-type, conserved site MID00_13800 IPR037219 Peptidase M41-like MID00_13800 IPR000642 Peptidase M41 MID00_13800 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13800 IPR005936 Peptidase, FtsH MID00_13800 IPR003959 ATPase, AAA-type, core MID00_13800 IPR041569 AAA ATPase, AAA+ lid domain MID00_13800 IPR003593 AAA+ ATPase domain MID00_13805 IPR009056 Cytochrome c-like domain MID00_13805 IPR036909 Cytochrome c-like domain superfamily MID00_13805 IPR024167 Cytochrome c4-like MID00_13820 IPR024084 Isopropylmalate dehydrogenase-like domain MID00_13820 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic MID00_13820 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site MID00_13825 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain MID00_13825 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_13825 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_13825 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_13825 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_13830 IPR000997 Cholinesterase MID00_13830 IPR029058 Alpha/Beta hydrolase fold MID00_13830 IPR002018 Carboxylesterase, type B MID00_13830 IPR019826 Carboxylesterase type B, active site MID00_13830 IPR019819 Carboxylesterase type B, conserved site MID00_13850 IPR036259 MFS transporter superfamily MID00_13850 IPR020846 Major facilitator superfamily domain MID00_13850 IPR005829 Sugar transporter, conserved site MID00_13850 IPR011701 Major facilitator superfamily MID00_13860 IPR013026 Tetratricopeptide repeat-containing domain MID00_13860 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_13860 IPR019734 Tetratricopeptide repeat MID00_13870 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_13870 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site MID00_13870 IPR005982 Thioredoxin reductase MID00_13870 IPR023753 FAD/NAD(P)-binding domain MID00_13875 IPR002543 FtsK domain MID00_13875 IPR041027 FtsK alpha domain MID00_13875 IPR036390 Winged helix DNA-binding domain superfamily MID00_13875 IPR025199 DNA translocase FtsK, 4TM region MID00_13875 IPR018541 FtsK gamma domain MID00_13875 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_13875 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13880 IPR029046 Lipoprotein localisation LolA/LolB/LppX MID00_13880 IPR004564 Outer membrane lipoprotein carrier protein LolA-like MID00_13880 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria MID00_13885 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_13885 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal MID00_13885 IPR003959 ATPase, AAA-type, core MID00_13885 IPR032423 AAA C-terminal domain MID00_13885 IPR003593 AAA+ ATPase domain MID00_13885 IPR021886 MgsA AAA+ ATPase C-terminal MID00_13890 IPR006195 Aminoacyl-tRNA synthetase, class II MID00_13890 IPR002317 Serine-tRNA ligase, type1 MID00_13890 IPR015866 Serine-tRNA synthetase, type1, N-terminal MID00_13890 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily MID00_13890 IPR033729 Serine-tRNA ligase catalytic core domain MID00_13890 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm MID00_13890 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) MID00_13910 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_13910 IPR011294 3-hydroxybutyrate dehydrogenase MID00_13910 IPR036291 NAD(P)-binding domain superfamily MID00_13910 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_13915 IPR005583 Peroxide stress protein YaaA MID00_13920 IPR032692 Integral membrane protein YccS, N-terminal MID00_13925 IPR029035 DHS-like NAD/FAD-binding domain superfamily MID00_13925 IPR029061 Thiamin diphosphate-binding fold MID00_13925 IPR012000 Thiamine pyrophosphate enzyme, central domain MID00_13925 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain MID00_13925 IPR000399 TPP-binding enzyme, conserved site MID00_13925 IPR039368 Acetolactate synthase large subunit, TPP binding domain MID00_13925 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding MID00_13925 IPR012846 Acetolactate synthase, large subunit, biosynthetic MID00_13930 IPR039557 AHAS, ACT domain MID00_13930 IPR002912 ACT domain MID00_13930 IPR019455 Acetolactate synthase, small subunit, C-terminal MID00_13930 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal MID00_13930 IPR004789 Acetolactate synthase, small subunit MID00_13935 IPR013023 Ketol-acid reductoisomerase MID00_13935 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_13935 IPR013116 Ketol-acid reductoisomerase, N-terminal MID00_13935 IPR014359 Ketol-acid reductoisomerase, prokaryotic MID00_13935 IPR036291 NAD(P)-binding domain superfamily MID00_13935 IPR000506 Ketol-acid reductoisomerase, C-terminal MID00_13940 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase MID00_13940 IPR000462 CDP-alcohol phosphatidyltransferase MID00_13945 IPR005290 Ribosomal protein S15, bacterial-type MID00_13945 IPR000589 Ribosomal protein S15 MID00_13945 IPR009068 S15/NS1, RNA-binding MID00_13950 IPR001247 Exoribonuclease, phosphorolytic domain 1 MID00_13950 IPR015847 Exoribonuclease, phosphorolytic domain 2 MID00_13950 IPR022967 RNA-binding domain, S1 MID00_13950 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_13950 IPR036345 Exoribonuclease, PH domain 2 superfamily MID00_13950 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain MID00_13950 IPR027408 PNPase/RNase PH domain superfamily MID00_13950 IPR012162 Polyribonucleotide nucleotidyltransferase MID00_13950 IPR012340 Nucleic acid-binding, OB-fold MID00_13950 IPR036612 K Homology domain, type 1 superfamily MID00_13950 IPR004088 K Homology domain, type 1 MID00_13950 IPR004087 K Homology domain MID00_13950 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily MID00_13950 IPR003029 S1 domain MID00_13965 IPR013149 Alcohol dehydrogenase, C-terminal MID00_13965 IPR013154 Alcohol dehydrogenase, N-terminal MID00_13965 IPR011032 GroES-like superfamily MID00_13965 IPR036291 NAD(P)-binding domain superfamily MID00_13965 IPR020843 Polyketide synthase, enoylreductase domain MID00_13970 IPR020861 Triosephosphate isomerase, active site MID00_13970 IPR035990 Triosephosphate isomerase superfamily MID00_13970 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic MID00_13970 IPR013785 Aldolase-type TIM barrel MID00_13970 IPR000652 Triosephosphate isomerase MID00_13975 IPR004692 Preprotein translocase SecG subunit MID00_13985 IPR023614 Porin domain superfamily MID00_13985 IPR001702 Porin, Gram-negative type MID00_13985 IPR002299 Porin, Neisseria sp. type MID00_13985 IPR033900 Porin domain, Gram-negative type MID00_13990 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid MID00_13990 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 MID00_13990 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily MID00_13995 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit MID00_13995 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit MID00_14000 IPR010218 NADH dehydrogenase, subunit C MID00_14000 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit MID00_14000 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site MID00_14000 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily MID00_14005 IPR001135 NADH-quinone oxidoreductase, subunit D MID00_14005 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily MID00_14005 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site MID00_14005 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H MID00_14005 IPR029014 [NiFe]-hydrogenase, large subunit MID00_14010 IPR002023 NADH-quinone oxidoreductase subunit E-like MID00_14010 IPR042128 NuoE domain MID00_14010 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal MID00_14010 IPR036249 Thioredoxin-like superfamily MID00_14015 IPR011537 NADH ubiquinone oxidoreductase, F subunit MID00_14015 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain MID00_14015 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily MID00_14015 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain MID00_14015 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily MID00_14015 IPR019554 Soluble ligand binding domain MID00_14015 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site MID00_14020 IPR010228 NADH:ubiquinone oxidoreductase, subunit G MID00_14020 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding MID00_14020 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal MID00_14020 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site MID00_14020 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain MID00_14020 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_14020 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_14020 IPR006656 Molybdopterin oxidoreductase MID00_14025 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H MID00_14025 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site MID00_14030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_14030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_14030 IPR010226 NADH-quinone oxidoreductase, chain I MID00_14035 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 MID00_14035 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ MID00_14040 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like MID00_14040 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K MID00_14045 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 MID00_14045 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup MID00_14045 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit MID00_14045 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal MID00_14050 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal MID00_14050 IPR010227 NADH-quinone oxidoreductase, chain M/4 MID00_14050 IPR003918 NADH:ubiquinone oxidoreductase MID00_14050 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit MID00_14055 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 MID00_14055 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit MID00_14065 IPR013785 Aldolase-type TIM barrel MID00_14065 IPR004136 Nitronate monooxygenase MID00_14070 IPR036412 HAD-like superfamily MID00_14070 IPR023214 HAD superfamily MID00_14075 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14075 IPR004576 Transcription-repair coupling factor MID00_14075 IPR001650 Helicase, C-terminal MID00_14075 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_14075 IPR011545 DEAD/DEAH box helicase domain MID00_14075 IPR041471 UvrB, interaction domain MID00_14075 IPR036101 CarD-like/TRCF domain superfamily MID00_14075 IPR037235 TRCF-like, C-terminal domain MID00_14075 IPR003711 CarD-like/TRCF domain MID00_14075 IPR005118 Transcription-repair-coupling factor, C-terminal domain MID00_14080 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MID00_14080 IPR034683 Cytidylyltransferase IspD/TarI MID00_14080 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site MID00_14080 IPR029044 Nucleotide-diphospho-sugar transferases MID00_14085 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase MID00_14085 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily MID00_14085 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site MID00_14090 IPR005467 Histidine kinase domain MID00_14090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_14090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_14090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_14090 IPR003594 Histidine kinase/HSP90-like ATPase MID00_14090 IPR003660 HAMP domain MID00_14090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_14095 IPR011006 CheY-like superfamily MID00_14095 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14095 IPR039420 Transcriptional regulatory protein WalR-like MID00_14095 IPR001789 Signal transduction response regulator, receiver domain MID00_14095 IPR016032 Signal transduction response regulator, C-terminal effector MID00_14095 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_14100 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB MID00_14100 IPR000905 Gcp-like domain MID00_14105 IPR005122 Uracil-DNA glycosylase-like MID00_14105 IPR036895 Uracil-DNA glycosylase-like domain superfamily MID00_14105 IPR005273 Uracil-DNA glycosylase family 4 MID00_14110 IPR023727 Lysophospholipid transporter LplT MID00_14110 IPR036259 MFS transporter superfamily MID00_14110 IPR011701 Major facilitator superfamily MID00_14115 IPR036277 SMCs flexible hinge superfamily MID00_14115 IPR010935 SMCs flexible hinge MID00_14115 IPR003395 RecF/RecN/SMC, N-terminal MID00_14115 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14115 IPR011890 Structural maintenance of chromosomes protein, prokaryotic MID00_14115 IPR024704 Structural maintenance of chromosomes protein MID00_14125 IPR010994 RuvA domain 2-like MID00_14125 IPR013840 NAD-dependent DNA ligase, N-terminal MID00_14125 IPR013839 NAD-dependent DNA ligase, adenylation MID00_14125 IPR001679 NAD-dependent DNA ligase MID00_14125 IPR033136 NAD-dependent DNA ligase, conserved site MID00_14125 IPR018239 NAD-dependent DNA ligase, active site MID00_14125 IPR041663 DisA/LigA, helix-hairpin-helix motif MID00_14125 IPR036420 BRCT domain superfamily MID00_14125 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 MID00_14125 IPR001357 BRCT domain MID00_14125 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type MID00_14125 IPR004150 NAD-dependent DNA ligase, OB-fold MID00_14125 IPR012340 Nucleic acid-binding, OB-fold MID00_14130 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type MID00_14130 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site MID00_14140 IPR006008 Intracellular septation protein A MID00_14145 IPR028427 Peptide methionine sulfoxide reductase MID00_14145 IPR002579 Peptide methionine sulphoxide reductase MrsB MID00_14145 IPR011057 Mss4-like superfamily MID00_14160 IPR003593 AAA+ ATPase domain MID00_14160 IPR003439 ABC transporter-like MID00_14160 IPR017871 ABC transporter, conserved site MID00_14160 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14160 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_14165 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14165 IPR003439 ABC transporter-like MID00_14165 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_14165 IPR017871 ABC transporter, conserved site MID00_14165 IPR003593 AAA+ ATPase domain MID00_14170 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel MID00_14170 IPR005618 Outer membrane protein, OmpW MID00_14175 IPR003439 ABC transporter-like MID00_14175 IPR017871 ABC transporter, conserved site MID00_14175 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14175 IPR003593 AAA+ ATPase domain MID00_14180 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal MID00_14180 IPR011257 DNA glycosylase MID00_14180 IPR004036 Endonuclease III-like, conserved site-2 MID00_14180 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif MID00_14180 IPR004035 Endonuclease III, iron-sulphur binding site MID00_14180 IPR003265 HhH-GPD domain MID00_14180 IPR000445 Helix-hairpin-helix motif MID00_14180 IPR005759 Endonuclease III MID00_14185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_14185 IPR007202 4Fe-4S domain MID00_14185 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_14185 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB MID00_14185 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria MID00_14195 IPR000813 7Fe ferredoxin MID00_14195 IPR022569 Ferredoxin, C-terminal MID00_14195 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_14195 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_14200 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase MID00_14200 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain MID00_14200 IPR006406 Nicotinate phosphoribosyltransferase MID00_14200 IPR007229 Nicotinate phosphoribosyltransferase family MID00_14200 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal MID00_14210 IPR004095 TGS MID00_14210 IPR033655 RelA, TGS domain MID00_14210 IPR012676 TGS-like MID00_14210 IPR007685 RelA/SpoT MID00_14210 IPR003607 HD/PDEase domain MID00_14210 IPR012675 Beta-grasp domain superfamily MID00_14210 IPR002912 ACT domain MID00_14210 IPR004811 RelA/SpoT family MID00_14215 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_14215 IPR006653 Tryptophan synthase, beta chain, conserved site MID00_14215 IPR006654 Tryptophan synthase, beta chain MID00_14215 IPR023026 Tryptophan synthase beta chain/beta chain-like MID00_14215 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_14220 IPR013785 Aldolase-type TIM barrel MID00_14220 IPR011060 Ribulose-phosphate binding barrel MID00_14220 IPR018204 Tryptophan synthase, alpha chain, active site MID00_14220 IPR002028 Tryptophan synthase, alpha chain MID00_14225 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal MID00_14225 IPR029045 ClpP/crotonase-like domain superfamily MID00_14225 IPR041010 Acetyl-coA carboxylase zinc finger domain MID00_14225 IPR034733 Acetyl-CoA carboxylase MID00_14225 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit MID00_14230 IPR012340 Nucleic acid-binding, OB-fold MID00_14230 IPR021968 Polyribonucleotide phosphorylase C-terminal MID00_14230 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G MID00_14230 IPR028878 Ribonuclease E MID00_14230 IPR004659 Ribonuclease E/G MID00_14230 IPR022967 RNA-binding domain, S1 MID00_14230 IPR003029 S1 domain MID00_14235 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_14235 IPR006225 Pseudouridine synthase, RluC/RluD MID00_14235 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site MID00_14235 IPR006145 Pseudouridine synthase, RsuA/RluA MID00_14235 IPR002942 RNA-binding S4 domain MID00_14235 IPR036986 RNA-binding S4 domain superfamily MID00_14240 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MID00_14240 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic MID00_14240 IPR037512 Phosphoglycolate phosphatase, prokaryotic MID00_14240 IPR023214 HAD superfamily MID00_14240 IPR006439 HAD hydrolase, subfamily IA MID00_14240 IPR036412 HAD-like superfamily MID00_14240 IPR041492 Haloacid dehalogenase-like hydrolase MID00_14245 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP MID00_14245 IPR000572 Oxidoreductase, molybdopterin-binding domain MID00_14245 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily MID00_14245 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_14245 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal MID00_14250 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ MID00_14250 IPR013130 Ferric reductase transmembrane component-like domain MID00_14255 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily MID00_14255 IPR002502 N-acetylmuramoyl-L-alanine amidase domain MID00_14255 IPR036365 PGBD-like superfamily MID00_14255 IPR036366 PGBD superfamily MID00_14260 IPR008189 rRNA small subunit methyltransferase I MID00_14260 IPR000878 Tetrapyrrole methylase MID00_14260 IPR035996 Tetrapyrrole methylase superfamily MID00_14260 IPR014777 Tetrapyrrole methylase, subdomain 1 MID00_14260 IPR018063 SAM-dependent methyltransferase RsmI, conserved site MID00_14260 IPR014776 Tetrapyrrole methylase, subdomain 2 MID00_14265 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein MID00_14265 IPR029001 Inosine triphosphate pyrophosphatase-like MID00_14270 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria MID00_14270 IPR003772 Large ribosomal RNA subunit accumulation protein YceD MID00_14275 IPR011332 Zinc-binding ribosomal protein MID00_14275 IPR002677 Ribosomal protein L32p MID00_14280 IPR012281 Phospholipid biosynthesis protein, PlsX-like MID00_14280 IPR003664 Fatty acid synthesis PlsX protein MID00_14285 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MID00_14285 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal MID00_14285 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 MID00_14285 IPR016039 Thiolase-like MID00_14290 IPR001227 Acyl transferase domain superfamily MID00_14290 IPR014043 Acyl transferase MID00_14290 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MID00_14290 IPR024925 Malonyl CoA-acyl carrier protein transacylase MID00_14290 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type MID00_14290 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding MID00_14295 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_14295 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_14295 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase MID00_14295 IPR036291 NAD(P)-binding domain superfamily MID00_14300 IPR036736 ACP-like superfamily MID00_14300 IPR003231 Acyl carrier protein (ACP) MID00_14300 IPR009081 Phosphopantetheine binding ACP domain MID00_14300 IPR006162 Phosphopantetheine attachment site MID00_14305 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 MID00_14305 IPR000794 Beta-ketoacyl synthase MID00_14305 IPR018201 Beta-ketoacyl synthase, active site MID00_14305 IPR014031 Beta-ketoacyl synthase, C-terminal MID00_14305 IPR014030 Beta-ketoacyl synthase, N-terminal MID00_14305 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MID00_14305 IPR016039 Thiolase-like MID00_14315 IPR014286 RNA polymerase sigma-70 RpoE type MID00_14315 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14315 IPR013325 RNA polymerase sigma factor, region 2 MID00_14315 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 MID00_14315 IPR013324 RNA polymerase sigma factor, region 3/4-like MID00_14315 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site MID00_14315 IPR014284 RNA polymerase sigma-70 like domain MID00_14315 IPR007627 RNA polymerase sigma-70 region 2 MID00_14315 IPR039425 RNA polymerase sigma-70 like MID00_14330 IPR001478 PDZ domain MID00_14330 IPR036034 PDZ superfamily MID00_14330 IPR011782 Peptidase S1C, Do MID00_14330 IPR009003 Peptidase S1, PA clan MID00_14330 IPR001940 Peptidase S1C MID00_14335 IPR009000 Translation protein, beta-barrel domain superfamily MID00_14335 IPR000795 Transcription factor, GTP-binding domain MID00_14335 IPR005225 Small GTP-binding protein domain MID00_14335 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14335 IPR035654 Elongation factor 4, domain IV MID00_14335 IPR013842 GTP-binding protein LepA, C-terminal MID00_14335 IPR000640 Elongation factor EFG, domain V-like MID00_14335 IPR031157 Tr-type G domain, conserved site MID00_14335 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_14335 IPR035647 EF-G domain III/V-like MID00_14335 IPR006297 Elongation factor 4 MID00_14335 IPR038363 LepA, C-terminal domain superfamily MID00_14340 IPR019756 Peptidase S26A, signal peptidase I, serine active site MID00_14340 IPR019533 Peptidase S26 MID00_14340 IPR019757 Peptidase S26A, signal peptidase I, lysine active site MID00_14340 IPR036286 LexA/Signal peptidase-like superfamily MID00_14340 IPR000223 Peptidase S26A, signal peptidase I MID00_14340 IPR019758 Peptidase S26A, signal peptidase I, conserved site MID00_14345 IPR014720 Double-stranded RNA-binding domain MID00_14345 IPR011907 Ribonuclease III MID00_14345 IPR000999 Ribonuclease III domain MID00_14345 IPR036389 Ribonuclease III, endonuclease domain superfamily MID00_14350 IPR005225 Small GTP-binding protein domain MID00_14350 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14350 IPR009019 K homology domain superfamily, prokaryotic type MID00_14350 IPR004044 K Homology domain, type 2 MID00_14350 IPR006073 GTP binding domain MID00_14350 IPR005662 GTP-binding protein Era MID00_14350 IPR030388 Era-type guanine nucleotide-binding (G) domain MID00_14350 IPR015946 K homology domain-like, alpha/beta MID00_14355 IPR012340 Nucleic acid-binding, OB-fold MID00_14355 IPR037278 ARFGAP/RecO-like zinc finger MID00_14355 IPR022572 DNA replication/recombination mediator RecO, N-terminal MID00_14355 IPR003717 Recombination protein O, RecO MID00_14365 IPR004626 RarD protein MID00_14370 IPR011004 Trimeric LpxA-like superfamily MID00_14370 IPR042122 Serine acetyltransferase, N-terminal domain superfamily MID00_14370 IPR001451 Hexapeptide repeat MID00_14375 IPR006214 Bax inhibitor 1-related MID00_14385 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal MID00_14385 IPR023042 Peptidase M17, leucine aminopeptidase MID00_14385 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal MID00_14385 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B MID00_14395 IPR000847 Transcription regulator HTH, LysR MID00_14395 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14395 IPR036390 Winged helix DNA-binding domain superfamily MID00_14395 IPR005119 LysR, substrate-binding MID00_14400 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_14400 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_14400 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_14400 IPR016161 Aldehyde/histidinol dehydrogenase MID00_14400 IPR015590 Aldehyde dehydrogenase domain MID00_14400 IPR010061 Methylmalonate-semialdehyde dehydrogenase MID00_14405 IPR000847 Transcription regulator HTH, LysR MID00_14405 IPR005119 LysR, substrate-binding MID00_14405 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain MID00_14405 IPR036390 Winged helix DNA-binding domain superfamily MID00_14405 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14415 IPR038765 Papain-like cysteine peptidase superfamily MID00_14415 IPR000064 Endopeptidase, NLPC/P60 domain MID00_14425 IPR042099 AMP-dependent synthetase-like superfamily MID00_14425 IPR000873 AMP-dependent synthetase/ligase MID00_14425 IPR025110 AMP-binding enzyme, C-terminal domain MID00_14425 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain MID00_14425 IPR011904 Acetate-CoA ligase MID00_14425 IPR020845 AMP-binding, conserved site MID00_14430 IPR000620 EamA domain MID00_14435 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase MID00_14435 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_14435 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_14445 IPR037171 NagB/RpiA transferase-like MID00_14445 IPR004163 Coenzyme A transferase binding site MID00_14445 IPR004165 Coenzyme A transferase family I MID00_14445 IPR012792 3-oxoacid CoA-transferase, subunit A MID00_14450 IPR004164 Coenzyme A transferase active site MID00_14450 IPR004165 Coenzyme A transferase family I MID00_14450 IPR012791 3-oxoacid CoA-transferase, subunit B MID00_14450 IPR037171 NagB/RpiA transferase-like MID00_14455 IPR000994 Peptidase M24 MID00_14455 IPR036005 Creatinase/aminopeptidase-like MID00_14455 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site MID00_14455 IPR000587 Creatinase, N-terminal MID00_14455 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MID00_14460 IPR017456 CTP synthase, N-terminal MID00_14460 IPR004468 CTP synthase MID00_14460 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14460 IPR029062 Class I glutamine amidotransferase-like MID00_14460 IPR017926 Glutamine amidotransferase MID00_14460 IPR033828 CTP synthase GATase domain MID00_14465 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MID00_14465 IPR037523 Vicinal oxygen chelate (VOC) domain MID00_14465 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MID00_14470 IPR013785 Aldolase-type TIM barrel MID00_14470 IPR006218 DAHP synthetase I/KDSA MID00_14470 IPR006269 3-deoxy-8-phosphooctulonate synthase MID00_14485 IPR036259 MFS transporter superfamily MID00_14485 IPR020846 Major facilitator superfamily domain MID00_14485 IPR011701 Major facilitator superfamily MID00_14485 IPR004638 Drug resistance transporter EmrB-like MID00_14495 IPR000941 Enolase MID00_14495 IPR036849 Enolase-like, C-terminal domain superfamily MID00_14495 IPR020811 Enolase, N-terminal MID00_14495 IPR020809 Enolase, conserved site MID00_14495 IPR020810 Enolase, C-terminal TIM barrel domain MID00_14495 IPR029017 Enolase-like, N-terminal MID00_14500 IPR023081 Cell division protein FtsB MID00_14500 IPR007060 Septum formation initiator FtsL/DivIC MID00_14510 IPR000397 Heat shock protein Hsp33 MID00_14510 IPR016153 Heat shock protein Hsp33, N-terminal MID00_14510 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily MID00_14510 IPR016154 Heat shock protein Hsp33, C-terminal MID00_14520 IPR002052 DNA methylase, N-6 adenine-specific, conserved site MID00_14520 IPR000241 Putative RNA methylase domain MID00_14520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_14520 IPR004114 THUMP domain MID00_14525 IPR005265 Protoporphyrinogen oxidase HemJ-like MID00_14530 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_14530 IPR000965 GPR domain MID00_14530 IPR016161 Aldehyde/histidinol dehydrogenase MID00_14530 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_14530 IPR012134 Glutamate-5-semialdehyde dehydrogenase MID00_14530 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site MID00_14530 IPR015590 Aldehyde dehydrogenase domain MID00_14535 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14535 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal MID00_14535 IPR010372 DNA polymerase III delta, N-terminal MID00_14535 IPR005790 DNA polymerase III, delta subunit MID00_14535 IPR032780 DNA polymerase III subunit delta, C-terminal MID00_14545 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding MID00_14545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_14545 IPR015413 Methionyl/Leucyl tRNA synthetase MID00_14545 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain MID00_14545 IPR025709 Leucyl-tRNA synthetase, editing domain MID00_14545 IPR002302 Leucine-tRNA ligase MID00_14545 IPR002300 Aminoacyl-tRNA synthetase, class Ia MID00_14545 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_14545 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding MID00_14550 IPR038584 Ribosomal protein L33 superfamily MID00_14550 IPR001705 Ribosomal protein L33 MID00_14550 IPR011332 Zinc-binding ribosomal protein MID00_14555 IPR034704 L28p-like MID00_14555 IPR001383 Ribosomal protein L28 MID00_14555 IPR037147 Ribosomal protein L28/L24 superfamily MID00_14555 IPR026569 Ribosomal protein L28/L24 MID00_14560 IPR004734 Multidrug resistance protein MID00_14560 IPR036259 MFS transporter superfamily MID00_14560 IPR020846 Major facilitator superfamily domain MID00_14560 IPR011701 Major facilitator superfamily MID00_14560 IPR004812 Drug resistance transporter Bcr/CmlA subfamily MID00_14565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_14565 IPR003333 Mycolic acid cyclopropane synthase MID00_14575 IPR035906 MetI-like superfamily MID00_14575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14580 IPR005892 Glycine betaine transport ATP-binding subunit MID00_14580 IPR003439 ABC transporter-like MID00_14580 IPR017871 ABC transporter, conserved site MID00_14580 IPR000644 CBS domain MID00_14580 IPR003593 AAA+ ATPase domain MID00_14585 IPR002528 Multi antimicrobial extrusion protein MID00_14595 IPR034704 L28p-like MID00_14595 IPR002150 Ribosomal protein L31 MID00_14595 IPR027493 Ribosomal protein L31 type B MID00_14595 IPR042105 Ribosomal protein L31 superfamily MID00_14615 IPR020846 Major facilitator superfamily domain MID00_14615 IPR005828 Major facilitator, sugar transporter-like MID00_14615 IPR036259 MFS transporter superfamily MID00_14615 IPR005829 Sugar transporter, conserved site MID00_14620 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14620 IPR035472 RpiR-like, SIS domain MID00_14620 IPR000281 Helix-turn-helix protein RpiR MID00_14620 IPR009057 Homeobox-like domain superfamily MID00_14620 IPR001347 Sugar isomerase (SIS) MID00_14625 IPR001405 Uncharacterised protein family UPF0758 MID00_14625 IPR037518 MPN domain MID00_14625 IPR025657 RadC-like JAB domain MID00_14625 IPR010994 RuvA domain 2-like MID00_14630 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain MID00_14635 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase MID00_14640 IPR010987 Glutathione S-transferase, C-terminal-like MID00_14640 IPR040079 Glutathione Transferase family MID00_14640 IPR004045 Glutathione S-transferase, N-terminal MID00_14640 IPR004046 Glutathione S-transferase, C-terminal MID00_14640 IPR005955 Glutathione S-transferases, class Zeta MID00_14640 IPR034330 Glutathione S-transferases, class Zeta , C-terminal MID00_14640 IPR034333 Glutathione S-transferases, class Zeta , N-terminal MID00_14640 IPR036249 Thioredoxin-like superfamily MID00_14640 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_14645 IPR036291 NAD(P)-binding domain superfamily MID00_14645 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site MID00_14645 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_14645 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_14645 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding MID00_14645 IPR015815 3-hydroxyisobutyrate dehydrogenase-related MID00_14645 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain MID00_14655 IPR001950 SUI1 domain MID00_14655 IPR005872 Archaeal/bacterial translation initiation factor SUI1 MID00_14655 IPR036877 SUI1 domain superfamily MID00_14670 IPR033954 Disulphide bond isomerase, DsbC/G MID00_14670 IPR012336 Thioredoxin-like fold MID00_14670 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily MID00_14670 IPR036249 Thioredoxin-like superfamily MID00_14675 IPR029001 Inosine triphosphate pyrophosphatase-like MID00_14675 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein MID00_14680 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MID00_14680 IPR029028 Alpha/beta knot methyltransferases MID00_14680 IPR003742 RNA methyltransferase RlmH MID00_14685 IPR004394 Protein Iojap/ribosomal silencing factor RsfS MID00_14690 IPR004821 Cytidyltransferase-like domain MID00_14690 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase MID00_14690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_14695 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily MID00_14695 IPR001260 Coproporphyrinogen III oxidase, aerobic MID00_14695 IPR018375 Coproporphyrinogen III oxidase, conserved site MID00_14700 IPR016185 Pre-ATP-grasp domain superfamily MID00_14700 IPR013815 ATP-grasp fold, subdomain 1 MID00_14700 IPR011054 Rudiment single hybrid motif MID00_14700 IPR020560 Phosphoribosylglycinamide synthetase, C-domain MID00_14700 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily MID00_14700 IPR011761 ATP-grasp fold MID00_14700 IPR000115 Phosphoribosylglycinamide synthetase MID00_14700 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MID00_14700 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal MID00_14705 IPR017856 Integrase-like, N-terminal MID00_14705 IPR026564 Transcriptional regulator TACO1-like, domain 3 MID00_14705 IPR029072 YebC-like MID00_14705 IPR002876 Transcriptional regulator TACO1-like MID00_14710 IPR033186 Helicase HerA-like C-terminal MID00_14710 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14715 IPR023514 Glyoxylate/hydroxypyruvate reductase A MID00_14715 IPR036291 NAD(P)-binding domain superfamily MID00_14715 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain MID00_14715 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site MID00_14720 IPR024084 Isopropylmalate dehydrogenase-like domain MID00_14720 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site MID00_14720 IPR011829 Tartrate dehydrogenase MID00_14730 IPR036291 NAD(P)-binding domain superfamily MID00_14730 IPR020843 Polyketide synthase, enoylreductase domain MID00_14730 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site MID00_14730 IPR013154 Alcohol dehydrogenase, N-terminal MID00_14730 IPR013149 Alcohol dehydrogenase, C-terminal MID00_14730 IPR011032 GroES-like superfamily MID00_14735 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal MID00_14735 IPR028343 Fructose-1,6-bisphosphatase MID00_14735 IPR000146 Fructose-1,6-bisphosphatase class 1 MID00_14740 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold MID00_14740 IPR027268 Peptidase M4/M1, CTD superfamily MID00_14740 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily MID00_14740 IPR012779 Peptidase M1, alanyl aminopeptidase MID00_14740 IPR014782 Peptidase M1, membrane alanine aminopeptidase MID00_14740 IPR042097 Aminopeptidase N-like , N-terminal MID00_14740 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily MID00_14740 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase MID00_14740 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal MID00_14750 IPR027444 Histone-like protein H-NS, C-terminal domain MID00_14750 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily MID00_14750 IPR001801 Histone-like protein H-NS MID00_14755 IPR036059 Metalloprotease TldD/PmbA superfamily MID00_14755 IPR035068 Metalloprotease TldD/PmbA, N-terminal MID00_14755 IPR002510 Metalloprotease TldD/PmbA MID00_14755 IPR025502 TldD MID00_14760 IPR000620 EamA domain MID00_14765 IPR000835 MarR-type HTH domain MID00_14765 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14765 IPR036390 Winged helix DNA-binding domain superfamily MID00_14765 IPR023187 Transcriptional regulator MarR-type, conserved site MID00_14770 IPR016181 Acyl-CoA N-acyltransferase MID00_14770 IPR012772 L-2,4-diaminobutyric acid acetyltransferase MID00_14770 IPR000182 GNAT domain MID00_14775 IPR012773 Ectoine biosynthetic protein MID00_14775 IPR004637 2,4-diaminobutyrate 4-transaminase MID00_14775 IPR005814 Aminotransferase class-III MID00_14775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_14775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_14775 IPR015424 Pyridoxal phosphate-dependent transferase MID00_14780 IPR014710 RmlC-like jelly roll fold MID00_14780 IPR011051 RmlC-like cupin domain superfamily MID00_14780 IPR010462 Ectoine synthase MID00_14785 IPR012774 Ectoine dioxygenase MID00_14785 IPR008775 Phytanoyl-CoA dioxygenase MID00_14795 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type MID00_14795 IPR003439 ABC transporter-like MID00_14795 IPR017871 ABC transporter, conserved site MID00_14795 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein MID00_14795 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_14795 IPR003593 AAA+ ATPase domain MID00_14800 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_14800 IPR035906 MetI-like superfamily MID00_14800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_14800 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD MID00_14805 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC MID00_14805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_14805 IPR035906 MetI-like superfamily MID00_14805 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_14810 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB MID00_14810 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_14815 IPR025299 CstA, C-terminal domain MID00_14815 IPR003706 CstA, N-terminal domain MID00_14820 IPR007423 Selenoprotein, putative MID00_14825 IPR013785 Aldolase-type TIM barrel MID00_14825 IPR006218 DAHP synthetase I/KDSA MID00_14825 IPR006219 DHAP synthase, class 1 MID00_14830 IPR036318 FAD-binding, type PCMH-like superfamily MID00_14830 IPR016164 FAD-linked oxidase-like, C-terminal MID00_14830 IPR004113 FAD-linked oxidase, C-terminal MID00_14830 IPR004490 Glycolate oxidase subunit GlcD MID00_14830 IPR006094 FAD linked oxidase, N-terminal MID00_14830 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 MID00_14830 IPR016166 FAD-binding domain, PCMH-type MID00_14835 IPR004506 tRNA-specific 2-thiouridylase MID00_14835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_14835 IPR023382 Adenine nucleotide alpha hydrolase-like domains MID00_14840 IPR002781 Transmembrane protein TauE-like MID00_14845 IPR029058 Alpha/Beta hydrolase fold MID00_14845 IPR033140 Lipase, GDXG, putative serine active site MID00_14845 IPR013094 Alpha/beta hydrolase fold-3 MID00_14855 IPR034343 Uncharacterized GST-like protein YibF MID00_14855 IPR036249 Thioredoxin-like superfamily MID00_14855 IPR004046 Glutathione S-transferase, C-terminal MID00_14855 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_14855 IPR010987 Glutathione S-transferase, C-terminal-like MID00_14855 IPR004045 Glutathione S-transferase, N-terminal MID00_14860 IPR013539 Adenylosuccinate lyase PurB, C-terminal MID00_14860 IPR024083 Fumarase/histidase, N-terminal MID00_14860 IPR020557 Fumarate lyase, conserved site MID00_14860 IPR000362 Fumarate lyase family MID00_14860 IPR022761 Fumarate lyase, N-terminal MID00_14860 IPR008948 L-Aspartase-like MID00_14860 IPR004769 Adenylosuccinate lyase MID00_14865 IPR015984 Cytochrome c prime, subgroup MID00_14865 IPR010980 Cytochrome c/b562 MID00_14865 IPR002321 Cytochrome c, class II MID00_14865 IPR012127 Cytochrome c prime MID00_14870 IPR029020 Ammonium/urea transporter MID00_14870 IPR001905 Ammonium transporter MID00_14870 IPR024041 Ammonium transporter AmtB-like domain MID00_14870 IPR018047 Ammonium transporter, conserved site MID00_14875 IPR011322 Nitrogen regulatory PII-like, alpha/beta MID00_14875 IPR002187 Nitrogen regulatory protein PII MID00_14875 IPR017918 Nitrogen regulatory protein PII, conserved site MID00_14875 IPR002332 Nitrogen regulatory protein P-II, urydylation site MID00_14875 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MID00_14880 IPR000835 MarR-type HTH domain MID00_14880 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14880 IPR036390 Winged helix DNA-binding domain superfamily MID00_14885 IPR042098 Taurine dioxygenase TauD-like superfamily MID00_14885 IPR003819 TauD/TfdA-like domain MID00_14890 IPR036259 MFS transporter superfamily MID00_14890 IPR000849 Sugar phosphate transporter MID00_14890 IPR011701 Major facilitator superfamily MID00_14890 IPR020846 Major facilitator superfamily domain MID00_14900 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative MID00_14905 IPR011009 Protein kinase-like domain superfamily MID00_14905 IPR010232 Probable protein kinase UbiB MID00_14905 IPR004147 UbiB domain MID00_14920 IPR000926 GTP cyclohydrolase II, RibA MID00_14920 IPR032677 GTP cyclohydrolase II MID00_14920 IPR036144 RibA-like superfamily MID00_14925 IPR023048 NADH-azoreductase, FMN-dependent MID00_14925 IPR029039 Flavoprotein-like superfamily MID00_14925 IPR003680 Flavodoxin-like fold MID00_14930 IPR000847 Transcription regulator HTH, LysR MID00_14930 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_14930 IPR005119 LysR, substrate-binding MID00_14930 IPR036390 Winged helix DNA-binding domain superfamily MID00_14940 IPR001727 Gdt1 family MID00_14945 IPR001610 PAC motif MID00_14945 IPR000014 PAS domain MID00_14945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain MID00_14945 IPR035965 PAS domain superfamily MID00_14945 IPR003660 HAMP domain MID00_14945 IPR004090 Chemotaxis methyl-accepting receptor MID00_14945 IPR013655 PAS fold-3 MID00_14950 IPR001789 Signal transduction response regulator, receiver domain MID00_14950 IPR029787 Nucleotide cyclase MID00_14950 IPR000160 GGDEF domain MID00_14950 IPR011006 CheY-like superfamily MID00_14955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_14955 IPR003594 Histidine kinase/HSP90-like ATPase MID00_14955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_14955 IPR005467 Histidine kinase domain MID00_14955 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_14955 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_14960 IPR030374 Polyamine biosynthesis domain MID00_14960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_14960 IPR001045 Spermidine/spermine synthases MID00_14960 IPR035246 Spermidine synthase, tetramerisation domain MID00_14960 IPR037163 Spermidine synthase, tetramerisation domain superfamily MID00_14965 IPR015947 PUA-like superfamily MID00_14965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_14965 IPR020792 Sulphate adenylyltransferase, prokaryotic-type MID00_14965 IPR024951 Sulphate adenylyltransferase catalytic domain MID00_14965 IPR002650 Sulphate adenylyltransferase MID00_14965 IPR025980 ATP-sulfurylase PUA-like domain MID00_14970 IPR038188 TorS, sensor domain superfamily MID00_14970 IPR001789 Signal transduction response regulator, receiver domain MID00_14970 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain MID00_14970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_14970 IPR037952 Sensor histidine kinase TorS, sensor domain MID00_14970 IPR036641 HPT domain superfamily MID00_14970 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_14970 IPR011006 CheY-like superfamily MID00_14970 IPR003660 HAMP domain MID00_14970 IPR005467 Histidine kinase domain MID00_14970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_14970 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_14970 IPR003594 Histidine kinase/HSP90-like ATPase MID00_14975 IPR011006 CheY-like superfamily MID00_14975 IPR016032 Signal transduction response regulator, C-terminal effector MID00_14975 IPR000792 Transcription regulator LuxR, C-terminal MID00_14975 IPR001789 Signal transduction response regulator, receiver domain MID00_14980 IPR001734 Sodium/solute symporter MID00_14980 IPR038377 Sodium/glucose symporter superfamily MID00_14980 IPR018212 Sodium/solute symporter, conserved site MID00_14980 IPR014083 Cation/acetate symporter ActP MID00_15000 IPR004778 Homoserine/Threonine efflux protein MID00_15000 IPR001123 Amino acid exporter protein, LeuE-type MID00_15005 IPR023025 Serine/threonine transporter SstT MID00_15005 IPR001991 Sodium:dicarboxylate symporter MID00_15005 IPR036458 Sodium:dicarboxylate symporter superfamily MID00_15015 IPR004046 Glutathione S-transferase, C-terminal MID00_15015 IPR036249 Thioredoxin-like superfamily MID00_15015 IPR004045 Glutathione S-transferase, N-terminal MID00_15015 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_15015 IPR010987 Glutathione S-transferase, C-terminal-like MID00_15025 IPR015424 Pyridoxal phosphate-dependent transferase MID00_15025 IPR004839 Aminotransferase, class I/classII MID00_15025 IPR036390 Winged helix DNA-binding domain superfamily MID00_15025 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15025 IPR000524 Transcription regulator HTH, GntR MID00_15025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_15030 IPR005119 LysR, substrate-binding MID00_15030 IPR000847 Transcription regulator HTH, LysR MID00_15030 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15030 IPR036390 Winged helix DNA-binding domain superfamily MID00_15030 IPR017685 HTH-type transcriptional regulator ArgP MID00_15035 IPR001123 Amino acid exporter protein, LeuE-type MID00_15035 IPR004777 L-lysine exporter/arginine exporter MID00_15050 IPR003593 AAA+ ATPase domain MID00_15050 IPR032524 ABC transporter Uup, C-terminal MID00_15050 IPR003439 ABC transporter-like MID00_15050 IPR017871 ABC transporter, conserved site MID00_15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15050 IPR032781 ABC-transporter extension domain MID00_15050 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily MID00_15060 IPR009057 Homeobox-like domain superfamily MID00_15060 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MID00_15060 IPR001647 DNA-binding HTH domain, TetR-type MID00_15065 IPR035959 RutC-like superfamily MID00_15065 IPR006175 YjgF/YER057c/UK114 family MID00_15065 IPR038743 YjgH-like MID00_15070 IPR005119 LysR, substrate-binding MID00_15070 IPR000847 Transcription regulator HTH, LysR MID00_15070 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15070 IPR036390 Winged helix DNA-binding domain superfamily MID00_15075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_15075 IPR015424 Pyridoxal phosphate-dependent transferase MID00_15075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_15075 IPR004839 Aminotransferase, class I/classII MID00_15085 IPR016024 Armadillo-type fold MID00_15085 IPR014825 DNA alkylation repair enzyme MID00_15085 IPR021133 HEAT, type 2 MID00_15090 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type MID00_15090 IPR029052 Metallo-dependent phosphatase-like MID00_15095 IPR002226 Catalase haem-binding site MID00_15095 IPR041399 Large catalase, C-terminal domain MID00_15095 IPR020835 Catalase superfamily MID00_15095 IPR010582 Catalase immune-responsive domain MID00_15095 IPR029062 Class I glutamine amidotransferase-like MID00_15095 IPR037060 Catalase core domain superfamily MID00_15095 IPR024708 Catalase active site MID00_15095 IPR024712 Catalase, mono-functional, haem-containing, clade 2 MID00_15095 IPR018028 Catalase, mono-functional, haem-containing MID00_15095 IPR011614 Catalase core domain MID00_15115 IPR000813 7Fe ferredoxin MID00_15115 IPR022569 Ferredoxin, C-terminal MID00_15115 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_15115 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_15120 IPR011701 Major facilitator superfamily MID00_15120 IPR020846 Major facilitator superfamily domain MID00_15120 IPR036259 MFS transporter superfamily MID00_15125 IPR005119 LysR, substrate-binding MID00_15125 IPR000847 Transcription regulator HTH, LysR MID00_15125 IPR036390 Winged helix DNA-binding domain superfamily MID00_15125 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15130 IPR036412 HAD-like superfamily MID00_15130 IPR006439 HAD hydrolase, subfamily IA MID00_15130 IPR041492 Haloacid dehalogenase-like hydrolase MID00_15130 IPR023214 HAD superfamily MID00_15130 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MID00_15130 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic MID00_15130 IPR037512 Phosphoglycolate phosphatase, prokaryotic MID00_15135 IPR010233 Ubiquinone biosynthesis O-methyltransferase MID00_15135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_15140 IPR036737 OmpA-like domain superfamily MID00_15140 IPR006690 Outer membrane protein, OmpA-like, conserved site MID00_15140 IPR006665 OmpA-like domain MID00_15140 IPR006664 Outer membrane protein, bacterial MID00_15145 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal MID00_15145 IPR013760 DNA topoisomerase, type IIA-like domain superfamily MID00_15145 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal MID00_15145 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat MID00_15145 IPR005743 DNA gyrase, subunit A MID00_15145 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta MID00_15145 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily MID00_15150 IPR000192 Aminotransferase class V domain MID00_15150 IPR022278 Phosphoserine aminotransferase MID00_15150 IPR015424 Pyridoxal phosphate-dependent transferase MID00_15150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_15150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_15155 IPR018528 Prephenate dehydratase, conserved site MID00_15155 IPR002912 ACT domain MID00_15155 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase MID00_15155 IPR036263 Chorismate mutase type II superfamily MID00_15155 IPR036979 Chorismate mutase domain superfamily MID00_15155 IPR002701 Chorismate mutase II, prokaryotic-type MID00_15155 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain MID00_15155 IPR001086 Prephenate dehydratase MID00_15160 IPR003099 Prephenate dehydrogenase MID00_15160 IPR002912 ACT domain MID00_15160 IPR036291 NAD(P)-binding domain superfamily MID00_15160 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_15165 IPR001986 Enolpyruvate transferase domain MID00_15165 IPR036968 Enolpyruvate transferase domain superfamily MID00_15165 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase MID00_15165 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site MID00_15165 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta MID00_15170 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15170 IPR003136 Cytidylate kinase MID00_15170 IPR011994 Cytidylate kinase domain MID00_15175 IPR022967 RNA-binding domain, S1 MID00_15175 IPR000110 Ribosomal protein S1 MID00_15175 IPR003029 S1 domain MID00_15175 IPR012340 Nucleic acid-binding, OB-fold MID00_15180 IPR005685 Integration host factor, beta subunit MID00_15180 IPR000119 Histone-like DNA-binding protein MID00_15180 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily MID00_15190 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_15190 IPR013026 Tetratricopeptide repeat-containing domain MID00_15190 IPR019734 Tetratricopeptide repeat MID00_15190 IPR030865 Lipopolysaccharide assembly protein B MID00_15190 IPR041166 LapB, rubredoxin metal binding domain MID00_15195 IPR011611 Carbohydrate kinase PfkB MID00_15195 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site MID00_15195 IPR011913 RfaE bifunctional protein, domain I MID00_15195 IPR029056 Ribokinase-like MID00_15200 IPR036291 NAD(P)-binding domain superfamily MID00_15200 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase MID00_15200 IPR001509 NAD-dependent epimerase/dehydratase MID00_15205 IPR004013 PHP domain MID00_15205 IPR029460 DNA polymerase, helix-hairpin-helix motif MID00_15205 IPR040982 DNA polymerase III alpha subunit finger domain MID00_15205 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain MID00_15205 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain MID00_15205 IPR016195 Polymerase/histidinol phosphatase-like MID00_15205 IPR003141 Polymerase/histidinol phosphatase, N-terminal MID00_15205 IPR010994 RuvA domain 2-like MID00_15205 IPR004805 DNA polymerase III, alpha subunit MID00_15210 IPR005856 Cysteine synthase MID00_15210 IPR005858 Cysteine synthase CysM MID00_15210 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site MID00_15210 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_15210 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_15215 IPR031304 Transglycosylase SLT domain 2 MID00_15215 IPR023346 Lysozyme-like domain superfamily MID00_15215 IPR011757 Lytic transglycosylase MltB MID00_15220 IPR023696 Ureohydrolase domain superfamily MID00_15220 IPR037138 Histone deacetylase domain superfamily MID00_15220 IPR023801 Histone deacetylase domain MID00_15220 IPR000286 Histone deacetylase family MID00_15225 IPR012255 Electron transfer flavoprotein, beta subunit MID00_15225 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal MID00_15225 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site MID00_15225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_15225 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal MID00_15230 IPR029035 DHS-like NAD/FAD-binding domain superfamily MID00_15230 IPR001308 Electron transfer flavoprotein alpha subunit/FixB MID00_15230 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site MID00_15230 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal MID00_15230 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal MID00_15230 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal MID00_15230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_15235 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_15235 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_15235 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_15235 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_15235 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_15235 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_15235 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain MID00_15240 IPR019479 Peroxiredoxin, C-terminal MID00_15240 IPR013766 Thioredoxin domain MID00_15240 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant MID00_15240 IPR022915 Peroxiredoxin, TDXH subfamily MID00_15240 IPR024706 Peroxiredoxin, AhpC-type MID00_15240 IPR036249 Thioredoxin-like superfamily MID00_15250 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain MID00_15250 IPR019491 Lipoate protein ligase, C-terminal MID00_15250 IPR004562 Lipoyltransferase/lipoate-protein ligase MID00_15260 IPR038657 Ribosomal protein L19 superfamily MID00_15260 IPR001857 Ribosomal protein L19 MID00_15260 IPR018257 Ribosomal protein L19, conserved site MID00_15260 IPR008991 Translation protein SH3-like domain superfamily MID00_15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15270 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain MID00_15270 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal MID00_15270 IPR010914 RsgA GTPase domain MID00_15270 IPR004881 Ribosome biogenesis GTPase RsgA MID00_15270 IPR012340 Nucleic acid-binding, OB-fold MID00_15275 IPR001915 Peptidase M48 MID00_15275 IPR027057 CAAX prenyl protease 1 MID00_15275 IPR032456 CAAX prenyl protease 1, N-terminal MID00_15280 IPR013520 Exonuclease, RNase T/DNA polymerase III MID00_15280 IPR036397 Ribonuclease H superfamily MID00_15280 IPR012337 Ribonuclease H-like superfamily MID00_15280 IPR022894 Oligoribonuclease MID00_15285 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C MID00_15285 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A MID00_15285 IPR009078 Ferritin-like superfamily MID00_15285 IPR012347 Ferritin-like MID00_15290 IPR009359 Phenylacetic acid degradation B MID00_15290 IPR038693 Phenylacetyl-CoA epoxidase, subunit B MID00_15295 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C MID00_15295 IPR012347 Ferritin-like MID00_15295 IPR009078 Ferritin-like superfamily MID00_15295 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C MID00_15300 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit MID00_15300 IPR002744 MIP18 family-like MID00_15300 IPR034904 Fe-S cluster assembly domain superfamily MID00_15305 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_15305 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_15305 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit MID00_15305 IPR017938 Riboflavin synthase-like beta-barrel MID00_15305 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_15305 IPR012675 Beta-grasp domain superfamily MID00_15305 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_15305 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_15305 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_15305 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase MID00_15305 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_15310 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_15310 IPR016161 Aldehyde/histidinol dehydrogenase MID00_15310 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent MID00_15310 IPR015590 Aldehyde dehydrogenase domain MID00_15310 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_15310 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_15310 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_15315 IPR014748 Enoyl-CoA hydratase, C-terminal MID00_15315 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB MID00_15315 IPR001753 Enoyl-CoA hydratase/isomerase MID00_15315 IPR029045 ClpP/crotonase-like domain superfamily MID00_15320 IPR029069 HotDog domain superfamily MID00_15320 IPR011973 Phenylacetic acid degradation protein PaaD MID00_15320 IPR006683 Thioesterase domain MID00_15320 IPR003736 Phenylacetic acid degradation-related domain MID00_15325 IPR011880 Phenylacetate-CoA ligase MID00_15325 IPR042099 AMP-dependent synthetase-like superfamily MID00_15325 IPR028154 AMP-dependent ligase, C-terminal MID00_15325 IPR000873 AMP-dependent synthetase/ligase MID00_15330 IPR008278 4'-phosphopantetheinyl transferase domain MID00_15330 IPR037143 4'-phosphopantetheinyl transferase domain superfamily MID00_15330 IPR002582 Holo-[acyl carrier protein] synthase MID00_15330 IPR004568 Phosphopantetheine-protein transferase domain MID00_15335 IPR019800 Glycoside hydrolase, family 3, active site MID00_15335 IPR001764 Glycoside hydrolase, family 3, N-terminal MID00_15335 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily MID00_15335 IPR017853 Glycoside hydrolase superfamily MID00_15335 IPR022956 Beta-hexosaminidase, bacterial MID00_15340 IPR001943 UVR domain MID00_15340 IPR000305 GIY-YIG endonuclease MID00_15340 IPR035901 GIY-YIG endonuclease superfamily MID00_15340 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 MID00_15340 IPR010994 RuvA domain 2-like MID00_15340 IPR036876 UVR domain superfamily MID00_15340 IPR001162 UvrC family homology region MID00_15340 IPR038476 UvrC homology region 2 superfamily MID00_15340 IPR004791 UvrABC system, subunit C MID00_15345 IPR000462 CDP-alcohol phosphatidyltransferase MID00_15345 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial MID00_15345 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase MID00_15355 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF MID00_15355 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal MID00_15355 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 MID00_15360 IPR040442 Pyruvate kinase-like domain superfamily MID00_15360 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_15360 IPR006254 Isocitrate lyase MID00_15360 IPR039556 ICL/PEPM domain MID00_15360 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site MID00_15365 IPR006121 Heavy metal-associated domain, HMA MID00_15365 IPR001757 P-type ATPase MID00_15365 IPR027256 P-type ATPase, subfamily IB MID00_15365 IPR036163 Heavy metal-associated domain superfamily MID00_15365 IPR006122 Heavy metal-associated domain, copper ion-binding MID00_15365 IPR023299 P-type ATPase, cytoplasmic domain N MID00_15365 IPR023214 HAD superfamily MID00_15365 IPR036412 HAD-like superfamily MID00_15365 IPR008250 P-type ATPase, A domain superfamily MID00_15365 IPR023298 P-type ATPase, transmembrane domain superfamily MID00_15365 IPR018303 P-type ATPase, phosphorylation site MID00_15365 IPR017969 Heavy-metal-associated, conserved site MID00_15375 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site MID00_15375 IPR004677 Cytochrome c oxidase cbb3-type, subunit I MID00_15375 IPR036927 Cytochrome c oxidase-like, subunit I superfamily MID00_15375 IPR000883 Cytochrome c oxidase subunit I MID00_15375 IPR023616 Cytochrome c oxidase-like, subunit I domain MID00_15390 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal MID00_15390 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily MID00_15390 IPR009056 Cytochrome c-like domain MID00_15390 IPR036909 Cytochrome c-like domain superfamily MID00_15390 IPR008168 Cytochrome c, class IC MID00_15390 IPR004678 Cytochrome c oxidase cbb3-type, subunit III MID00_15395 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_15395 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_15395 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG MID00_15395 IPR032879 FixG, C-terminal immunoglobulin-like domain MID00_15395 IPR013783 Immunoglobulin-like fold MID00_15410 IPR036390 Winged helix DNA-binding domain superfamily MID00_15410 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15410 IPR014710 RmlC-like jelly roll fold MID00_15410 IPR012318 Crp-type HTH domain MID00_15410 IPR000595 Cyclic nucleotide-binding domain MID00_15410 IPR018335 Transcription regulator HTH, Crp-type, conserved site MID00_15410 IPR018490 Cyclic nucleotide-binding-like MID00_15415 IPR041546 ClpA/ClpB, AAA lid domain MID00_15415 IPR028299 ClpA/B, conserved site 2 MID00_15415 IPR018368 ClpA/B, conserved site 1 MID00_15415 IPR001270 ClpA/B family MID00_15415 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15415 IPR036628 Clp, N-terminal domain superfamily MID00_15415 IPR019489 Clp ATPase, C-terminal MID00_15415 IPR017730 Chaperonin ClpB MID00_15415 IPR003959 ATPase, AAA-type, core MID00_15415 IPR003593 AAA+ ATPase domain MID00_15415 IPR004176 Clp, N-terminal MID00_15420 IPR003828 Epoxyqueuosine reductase QueH MID00_15425 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme MID00_15425 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain MID00_15425 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase MID00_15435 IPR012338 Beta-lactamase/transpeptidase-like MID00_15435 IPR000871 Beta-lactamase, class-A MID00_15435 IPR023650 Beta-lactamase, class-A active site MID00_15440 IPR033922 NAD(P) binding domain of glutamate dehydrogenase MID00_15440 IPR014362 Glutamate dehydrogenase MID00_15440 IPR036291 NAD(P)-binding domain superfamily MID00_15440 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal MID00_15440 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain MID00_15440 IPR033524 Leu/Phe/Val dehydrogenases active site MID00_15440 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase MID00_15445 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain MID00_15445 IPR011129 Cold shock domain MID00_15445 IPR012340 Nucleic acid-binding, OB-fold MID00_15445 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15445 IPR041703 Transcription termination factor Rho, ATP binding domain MID00_15445 IPR036269 Rho termination factor, N-terminal domain superfamily MID00_15445 IPR011113 Rho termination factor, RNA-binding domain MID00_15445 IPR004665 Transcription termination factor Rho MID00_15445 IPR003593 AAA+ ATPase domain MID00_15445 IPR011112 Rho termination factor, N-terminal MID00_15450 IPR005746 Thioredoxin MID00_15450 IPR036249 Thioredoxin-like superfamily MID00_15450 IPR017937 Thioredoxin, conserved site MID00_15450 IPR013766 Thioredoxin domain MID00_15455 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative MID00_15455 IPR001241 DNA topoisomerase, type IIA MID00_15455 IPR013760 DNA topoisomerase, type IIA-like domain superfamily MID00_15455 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_15455 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 MID00_15455 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_15455 IPR003594 Histidine kinase/HSP90-like ATPase MID00_15455 IPR002288 DNA gyrase B subunit, C-terminal MID00_15455 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_15455 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal MID00_15455 IPR006171 TOPRIM domain MID00_15455 IPR018522 DNA topoisomerase, type IIA, conserved site MID00_15460 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative MID00_15460 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal MID00_15460 IPR013760 DNA topoisomerase, type IIA-like domain superfamily MID00_15460 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal MID00_15460 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta MID00_15460 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily MID00_15465 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_15465 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_15465 IPR012675 Beta-grasp domain superfamily MID00_15465 IPR017938 Riboflavin synthase-like beta-barrel MID00_15465 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_15465 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_15465 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_15465 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_15465 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_15470 IPR006076 FAD dependent oxidoreductase MID00_15470 IPR023080 D-amino acid dehydrogenase DadA MID00_15470 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_15475 IPR006061 Solute-binding family 1, conserved site MID00_15475 IPR006059 Bacterial extracellular solute-binding protein MID00_15510 IPR014306 Hydroxyisourate hydrolase MID00_15510 IPR023418 Transthyretin, thyroxine binding site MID00_15510 IPR023416 Transthyretin/hydroxyisourate hydrolase domain MID00_15510 IPR023419 Transthyretin, conserved site MID00_15510 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily MID00_15525 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria MID00_15525 IPR003156 DHHA1 domain MID00_15525 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily MID00_15525 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain MID00_15525 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily MID00_15525 IPR002318 Alanine-tRNA ligase, class IIc MID00_15525 IPR012947 Threonyl/alanyl tRNA synthetase, SAD MID00_15525 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal MID00_15525 IPR009000 Translation protein, beta-barrel domain superfamily MID00_15530 IPR036868 TusA-like domain superfamily MID00_15530 IPR001455 TusA-like domain MID00_15535 IPR023803 Ribosomal protein S16 domain superfamily MID00_15535 IPR000307 Ribosomal protein S16 MID00_15540 IPR011033 PRC-barrel-like superfamily MID00_15540 IPR002676 RimM, N-terminal MID00_15540 IPR036976 RimM, N-terminal domain superfamily MID00_15540 IPR009000 Translation protein, beta-barrel domain superfamily MID00_15540 IPR011961 16S rRNA processing protein RimM MID00_15545 IPR029028 Alpha/beta knot methyltransferases MID00_15545 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria MID00_15545 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal MID00_15545 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MID00_15545 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MID00_15555 IPR036390 Winged helix DNA-binding domain superfamily MID00_15555 IPR000847 Transcription regulator HTH, LysR MID00_15555 IPR005119 LysR, substrate-binding MID00_15555 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain MID00_15555 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15560 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm MID00_15560 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding MID00_15560 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily MID00_15560 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm MID00_15560 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain MID00_15560 IPR002303 Valine-tRNA ligase MID00_15560 IPR033705 Valyl tRNA synthetase, anticodon-binding domain MID00_15560 IPR002300 Aminoacyl-tRNA synthetase, class Ia MID00_15560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_15560 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding MID00_15560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_15565 IPR034907 Nucleoside diphosphate kinase-like domain MID00_15565 IPR001564 Nucleoside diphosphate kinase MID00_15565 IPR023005 Nucleoside diphosphate kinase, active site MID00_15565 IPR036850 Nucleoside diphosphate kinase-like domain superfamily MID00_15570 IPR013785 Aldolase-type TIM barrel MID00_15570 IPR040072 Methyltransferase (Class A) MID00_15570 IPR027492 Dual-specificity RNA methyltransferase RlmN MID00_15570 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr MID00_15570 IPR007197 Radical SAM MID00_15580 IPR011005 Dihydropteroate synthase-like MID00_15580 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial MID00_15580 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type MID00_15585 IPR006195 Aminoacyl-tRNA synthetase, class II MID00_15585 IPR004154 Anticodon-binding MID00_15585 IPR033656 Histidyl-anticodon-binding MID00_15585 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain MID00_15585 IPR015807 Histidine-tRNA ligase MID00_15585 IPR036621 Anticodon-binding domain superfamily MID00_15585 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit MID00_15590 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_15590 IPR018704 Tetratricopeptide repeat-like domain MID00_15590 IPR026039 Uncharacterised protein family UPF0070 MID00_15595 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MID00_15595 IPR017687 Outer membrane protein assembly factor BamB MID00_15595 IPR002372 Pyrrolo-quinoline quinone repeat MID00_15595 IPR015943 WD40/YVTN repeat-like-containing domain superfamily MID00_15595 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MID00_15600 IPR003593 AAA+ ATPase domain MID00_15600 IPR016484 GTP-binding protein EngA MID00_15600 IPR006073 GTP binding domain MID00_15600 IPR015946 K homology domain-like, alpha/beta MID00_15600 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15600 IPR005225 Small GTP-binding protein domain MID00_15600 IPR031166 EngA-type guanine nucleotide-binding (G) domain MID00_15600 IPR032859 GTPase Der, C-terminal KH-domain-like MID00_15605 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site MID00_15605 IPR004839 Aminotransferase, class I/classII MID00_15605 IPR005861 Histidinol-phosphate aminotransferase family MID00_15605 IPR015424 Pyridoxal phosphate-dependent transferase MID00_15605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_15605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_15610 IPR005001 RNA-binding protein Hfq MID00_15610 IPR010920 LSM domain superfamily MID00_15615 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15615 IPR035647 EF-G domain III/V-like MID00_15615 IPR030394 HflX-type guanine nucleotide-binding (G) domain MID00_15615 IPR032305 GTP-binding protein, middle domain MID00_15615 IPR006073 GTP binding domain MID00_15615 IPR016496 GTPase HflX MID00_15615 IPR025121 GTPase HflX, N-terminal MID00_15615 IPR042108 GTPase HflX, N-terminal domain superfamily MID00_15620 IPR036013 Band 7/SPFH domain superfamily MID00_15620 IPR010201 HflK MID00_15620 IPR020980 Menbrane protein HflK, N-terminal MID00_15620 IPR001972 Stomatin family MID00_15620 IPR001107 Band 7 domain MID00_15625 IPR001107 Band 7 domain MID00_15625 IPR036013 Band 7/SPFH domain superfamily MID00_15625 IPR010200 HflC MID00_15630 IPR004517 ATP phosphoribosyltransferase regulatory subunit MID00_15630 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain MID00_15630 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit MID00_15635 IPR018220 Adenylosuccinate synthase, GTP-binding site MID00_15635 IPR033128 Adenylosuccinate synthase, active site MID00_15635 IPR042109 Adenylosuccinate synthetase, domain 1 MID00_15635 IPR042110 Adenylosuccinate synthetase, domain 2 MID00_15635 IPR042111 Adenylosuccinate synthetase, domain 3 MID00_15635 IPR001114 Adenylosuccinate synthetase MID00_15635 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15640 IPR023747 Xanthine-guanine phosphoribosyltransferase MID00_15640 IPR029057 Phosphoribosyltransferase-like MID00_15640 IPR000836 Phosphoribosyltransferase domain MID00_15645 IPR038380 Ribosomal protein S21 superfamily MID00_15645 IPR018278 Ribosomal protein S21, conserved site MID00_15645 IPR001911 Ribosomal protein S21 MID00_15650 IPR013173 DNA primase DnaG, DnaB-binding domain MID00_15650 IPR036977 DNA Primase, CHC2-type zinc finger MID00_15650 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily MID00_15650 IPR030846 DNA primase DnaG, bacteria MID00_15650 IPR034151 Bacterial DnaG primase, TOPRIM domain MID00_15650 IPR013264 DNA primase, catalytic core, N-terminal MID00_15650 IPR019475 DNA primase, DnaB-helicase binding domain MID00_15650 IPR006295 DNA primase, DnaG MID00_15650 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal MID00_15650 IPR006171 TOPRIM domain MID00_15650 IPR002694 Zinc finger, CHC2-type MID00_15655 IPR000943 RNA polymerase sigma-70 MID00_15655 IPR014284 RNA polymerase sigma-70 like domain MID00_15655 IPR007627 RNA polymerase sigma-70 region 2 MID00_15655 IPR007624 RNA polymerase sigma-70 region 3 MID00_15655 IPR007630 RNA polymerase sigma-70 region 4 MID00_15655 IPR007631 RNA polymerase sigma factor 70, non-essential domain MID00_15655 IPR007127 RNA polymerase sigma factor 70, region 1.1 MID00_15655 IPR042189 Sigma-70 factor, region 1.1 superfamily MID00_15655 IPR009042 RNA polymerase sigma-70 region 1.2 MID00_15655 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15655 IPR028630 RNA polymerase sigma factor RpoD MID00_15655 IPR013325 RNA polymerase sigma factor, region 2 MID00_15655 IPR012760 RNA polymerase sigma factor RpoD, C-terminal MID00_15655 IPR013324 RNA polymerase sigma factor, region 3/4-like MID00_15660 IPR003660 HAMP domain MID00_15660 IPR003594 Histidine kinase/HSP90-like ATPase MID00_15660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_15660 IPR005467 Histidine kinase domain MID00_15660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_15660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_15660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_15665 IPR001789 Signal transduction response regulator, receiver domain MID00_15665 IPR039420 Transcriptional regulatory protein WalR-like MID00_15665 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15665 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_15665 IPR011006 CheY-like superfamily MID00_15670 IPR007269 Isoprenylcysteine carboxyl methyltransferase MID00_15675 IPR006680 Amidohydrolase-related MID00_15675 IPR014311 Guanine deaminase MID00_15675 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_15675 IPR032466 Metal-dependent hydrolase MID00_15685 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead MID00_15685 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding MID00_15685 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily MID00_15685 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily MID00_15690 IPR002888 [2Fe-2S]-binding MID00_15690 IPR036884 [2Fe-2S]-binding domain superfamily MID00_15690 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_15690 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_15690 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_15690 IPR012675 Beta-grasp domain superfamily MID00_15695 IPR036390 Winged helix DNA-binding domain superfamily MID00_15695 IPR000847 Transcription regulator HTH, LysR MID00_15695 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15695 IPR005119 LysR, substrate-binding MID00_15700 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel MID00_15700 IPR005501 LamB/YcsF/PxpA-like MID00_15710 IPR004711 Benzoate transporter MID00_15715 IPR011051 RmlC-like cupin domain superfamily MID00_15715 IPR014710 RmlC-like jelly roll fold MID00_15715 IPR018062 HTH domain AraC-type, conserved site MID00_15715 IPR009057 Homeobox-like domain superfamily MID00_15715 IPR003313 AraC-type arabinose-binding/dimerisation domain MID00_15715 IPR018060 DNA binding HTH domain, AraC-type MID00_15720 IPR004747 Cyanate transport system protein MID00_15720 IPR011701 Major facilitator superfamily MID00_15720 IPR020846 Major facilitator superfamily domain MID00_15720 IPR036259 MFS transporter superfamily MID00_15725 IPR036259 MFS transporter superfamily MID00_15725 IPR011701 Major facilitator superfamily MID00_15725 IPR020846 Major facilitator superfamily domain MID00_15730 IPR003010 Carbon-nitrogen hydrolase MID00_15730 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_15730 IPR001110 Uncharacterised protein family UPF0012, conserved site MID00_15740 IPR012093 Pirin MID00_15740 IPR008778 Pirin, C-terminal domain MID00_15740 IPR003829 Pirin, N-terminal domain MID00_15740 IPR014710 RmlC-like jelly roll fold MID00_15740 IPR011051 RmlC-like cupin domain superfamily MID00_15750 IPR010987 Glutathione S-transferase, C-terminal-like MID00_15750 IPR004045 Glutathione S-transferase, N-terminal MID00_15750 IPR040079 Glutathione Transferase family MID00_15750 IPR036249 Thioredoxin-like superfamily MID00_15750 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_15755 IPR024530 Putative quorum-sensing-regulated virulence factor MID00_15760 IPR029058 Alpha/Beta hydrolase fold MID00_15760 IPR002925 Dienelactone hydrolase MID00_15770 IPR000182 GNAT domain MID00_15770 IPR016181 Acyl-CoA N-acyltransferase MID00_15775 IPR006076 FAD dependent oxidoreductase MID00_15775 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_15780 IPR026045 Ferric binding protein MID00_15785 IPR036412 HAD-like superfamily MID00_15785 IPR006439 HAD hydrolase, subfamily IA MID00_15785 IPR023214 HAD superfamily MID00_15785 IPR023198 Phosphoglycolate phosphatase-like, domain 2 MID00_15785 IPR006323 Phosphonoacetaldehyde hydrolase MID00_15785 IPR041492 Haloacid dehalogenase-like hydrolase MID00_15790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_15790 IPR035906 MetI-like superfamily MID00_15795 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15795 IPR013611 Transport-associated OB, type 2 MID00_15795 IPR017871 ABC transporter, conserved site MID00_15795 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 MID00_15795 IPR003593 AAA+ ATPase domain MID00_15795 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal MID00_15795 IPR003439 ABC transporter-like MID00_15795 IPR008995 Molybdate/tungstate binding, C-terminal MID00_15800 IPR005119 LysR, substrate-binding MID00_15800 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15800 IPR036390 Winged helix DNA-binding domain superfamily MID00_15800 IPR000847 Transcription regulator HTH, LysR MID00_15810 IPR010627 Peptidase A24A, N-terminal MID00_15810 IPR014032 Peptidase A24A, prepilin type IV, bacterial MID00_15810 IPR000045 Prepilin type IV endopeptidase, peptidase domain MID00_15830 IPR039374 Siderophore-interacting protein MID00_15830 IPR013113 FAD-binding 9, siderophore-interacting MID00_15830 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_15830 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_15830 IPR017938 Riboflavin synthase-like beta-barrel MID00_15830 IPR007037 Siderophore-interacting protein, C-terminal domain MID00_15845 IPR005119 LysR, substrate-binding MID00_15845 IPR000847 Transcription regulator HTH, LysR MID00_15845 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15845 IPR036390 Winged helix DNA-binding domain superfamily MID00_15850 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site MID00_15850 IPR036264 Bacterial exopeptidase dimerisation domain MID00_15850 IPR017150 Peptidase M20, glutamate carboxypeptidase MID00_15850 IPR002933 Peptidase M20 MID00_15850 IPR011650 Peptidase M20, dimerisation domain MID00_15870 IPR022967 RNA-binding domain, S1 MID00_15870 IPR003029 S1 domain MID00_15870 IPR004476 Ribonuclease II/ribonuclease R MID00_15870 IPR022966 Ribonuclease II/R, conserved site MID00_15870 IPR001900 Ribonuclease II/R MID00_15870 IPR011805 Ribonuclease R MID00_15870 IPR013668 Ribonuclease R winged-helix domain MID00_15870 IPR011129 Cold shock domain MID00_15870 IPR040476 RNase II/RNase R, cold shock domain MID00_15870 IPR013223 Ribonuclease B, N-terminal OB domain MID00_15870 IPR012340 Nucleic acid-binding, OB-fold MID00_15875 IPR013123 RNA 2-O ribose methyltransferase, substrate binding MID00_15875 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB MID00_15875 IPR029028 Alpha/beta knot methyltransferases MID00_15875 IPR029064 50S ribosomal protein L30e-like MID00_15875 IPR004441 RNA methyltransferase TrmH family MID00_15875 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MID00_15875 IPR001537 tRNA/rRNA methyltransferase, SpoU type MID00_15880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_15880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_15880 IPR015424 Pyridoxal phosphate-dependent transferase MID00_15880 IPR006237 L-methionine gamma-lyase MID00_15880 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme MID00_15885 IPR036390 Winged helix DNA-binding domain superfamily MID00_15885 IPR015424 Pyridoxal phosphate-dependent transferase MID00_15885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_15885 IPR000524 Transcription regulator HTH, GntR MID00_15885 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15885 IPR004839 Aminotransferase, class I/classII MID00_15890 IPR036909 Cytochrome c-like domain superfamily MID00_15890 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily MID00_15890 IPR009056 Cytochrome c-like domain MID00_15890 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily MID00_15895 IPR024167 Cytochrome c4-like MID00_15895 IPR009056 Cytochrome c-like domain MID00_15895 IPR036909 Cytochrome c-like domain superfamily MID00_15895 IPR008168 Cytochrome c, class IC MID00_15900 IPR006366 Uroporphyrin-III C-methyltransferase MID00_15900 IPR000878 Tetrapyrrole methylase MID00_15900 IPR035996 Tetrapyrrole methylase superfamily MID00_15900 IPR036291 NAD(P)-binding domain superfamily MID00_15900 IPR014777 Tetrapyrrole methylase, subdomain 1 MID00_15900 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site MID00_15900 IPR006367 Sirohaem synthase, N-terminal MID00_15900 IPR019478 Sirohaem synthase, dimerisation domain MID00_15900 IPR028281 Siroheme synthase, central domain MID00_15900 IPR012409 Sirohaem synthase MID00_15900 IPR014776 Tetrapyrrole methylase, subdomain 2 MID00_15905 IPR034391 Cmo-like SPASM domain containing MID00_15905 IPR006638 Elp3/MiaB/NifB MID00_15905 IPR023885 4Fe4S-binding SPASM domain MID00_15905 IPR007197 Radical SAM MID00_15905 IPR030896 Heme b synthase MID00_15905 IPR013785 Aldolase-type TIM barrel MID00_15905 IPR017200 Coenzyme PQQ synthesis protein E MID00_15910 IPR040523 AsnC-like ligand binding domain MID00_15915 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15915 IPR000485 AsnC-type HTH domain MID00_15915 IPR040523 AsnC-like ligand binding domain MID00_15920 IPR036390 Winged helix DNA-binding domain superfamily MID00_15920 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_15920 IPR040523 AsnC-like ligand binding domain MID00_15920 IPR000485 AsnC-type HTH domain MID00_15925 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily MID00_15925 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily MID00_15930 IPR036909 Cytochrome c-like domain superfamily MID00_15930 IPR009056 Cytochrome c-like domain MID00_15935 IPR014777 Tetrapyrrole methylase, subdomain 1 MID00_15935 IPR035996 Tetrapyrrole methylase superfamily MID00_15935 IPR000878 Tetrapyrrole methylase MID00_15935 IPR036291 NAD(P)-binding domain superfamily MID00_15935 IPR012409 Sirohaem synthase MID00_15935 IPR014776 Tetrapyrrole methylase, subdomain 2 MID00_15935 IPR028281 Siroheme synthase, central domain MID00_15935 IPR006367 Sirohaem synthase, N-terminal MID00_15935 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site MID00_15935 IPR019478 Sirohaem synthase, dimerisation domain MID00_15935 IPR006366 Uroporphyrin-III C-methyltransferase MID00_15940 IPR000119 Histone-like DNA-binding protein MID00_15940 IPR020816 Histone-like DNA-binding protein, conserved site MID00_15940 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily MID00_15950 IPR012156 Cold shock, CspA MID00_15950 IPR011129 Cold shock domain MID00_15950 IPR019844 Cold-shock (CSD) domain MID00_15950 IPR002059 Cold-shock protein, DNA-binding MID00_15950 IPR012340 Nucleic acid-binding, OB-fold MID00_15970 IPR000957 Sulphate/thiosulphate-binding, conserved site MID00_15970 IPR005669 Thiosulphate/Sulfate-binding protein MID00_15970 IPR034408 Sulphate/thiosulphate-binding site MID00_15975 IPR005667 Sulphate ABC transporter permease protein 2 MID00_15975 IPR035906 MetI-like superfamily MID00_15975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_15975 IPR011865 Sulphate ABC transporter, permease protein CysT MID00_15980 IPR011866 Sulphate ABC transporter, permease protein CysW MID00_15980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_15980 IPR035906 MetI-like superfamily MID00_15980 IPR005667 Sulphate ABC transporter permease protein 2 MID00_15985 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal MID00_15985 IPR008995 Molybdate/tungstate binding, C-terminal MID00_15985 IPR003439 ABC transporter-like MID00_15985 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_15985 IPR005666 Sulphate transport system permease protein 1 MID00_15985 IPR024765 TOBE-like domain MID00_15985 IPR003593 AAA+ ATPase domain MID00_15985 IPR017871 ABC transporter, conserved site MID00_15995 IPR002898 MotA/TolQ/ExbB proton channel MID00_16000 IPR003400 Biopolymer transport protein ExbD/TolR MID00_16005 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_16005 IPR016032 Signal transduction response regulator, C-terminal effector MID00_16005 IPR001789 Signal transduction response regulator, receiver domain MID00_16005 IPR039420 Transcriptional regulatory protein WalR-like MID00_16005 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_16005 IPR011006 CheY-like superfamily MID00_16010 IPR005467 Histidine kinase domain MID00_16010 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_16010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_16010 IPR003594 Histidine kinase/HSP90-like ATPase MID00_16010 IPR013727 Two-component sensor kinase, N-terminal MID00_16010 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_16010 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_16015 IPR003855 Potassium transporter MID00_16015 IPR023051 Potassium uptake protein, low affinity, Kup MID00_16030 IPR007208 Na(+)/H(+) antiporter subunit F-like MID00_16040 IPR004775 Na(+)/H(+) antiporter subunit D1 MID00_16040 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit MID00_16045 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like MID00_16045 IPR006673 Mnh complex subunit C1 MID00_16050 IPR005281 Monovalent cation:proton antiporter, subunit B MID00_16050 IPR025383 Domain of unknown function DUF4040 MID00_16050 IPR007182 Na+/H+ antiporter MnhB subunit-related protein MID00_16050 IPR005663 Monovalent cation proton antiporter subunit A MID00_16050 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit MID00_16050 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal MID00_16055 IPR023404 Radical SAM, alpha/beta horseshoe MID00_16055 IPR007197 Radical SAM MID00_16055 IPR010723 HemN, C-terminal MID00_16055 IPR034505 Anaerobic coproporphyrinogen-III oxidase MID00_16055 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN MID00_16055 IPR006638 Elp3/MiaB/NifB MID00_16060 IPR013785 Aldolase-type TIM barrel MID00_16060 IPR004136 Nitronate monooxygenase MID00_16070 IPR011625 Alpha-2-macroglobulin, bait region domain MID00_16070 IPR001599 Alpha-2-macroglobulin MID00_16070 IPR002890 Macroglobulin domain MID00_16070 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid MID00_16075 IPR012338 Beta-lactamase/transpeptidase-like MID00_16075 IPR001264 Glycosyl transferase, family 51 MID00_16075 IPR023346 Lysozyme-like domain superfamily MID00_16075 IPR036950 Penicillin binding protein transglycosylase domain MID00_16075 IPR001460 Penicillin-binding protein, transpeptidase MID00_16090 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain MID00_16090 IPR002082 Aspartate carbamoyltransferase MID00_16090 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding MID00_16090 IPR006130 Aspartate/ornithine carbamoyltransferase MID00_16090 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily MID00_16095 IPR016161 Aldehyde/histidinol dehydrogenase MID00_16095 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_16095 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_16095 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_16095 IPR015590 Aldehyde dehydrogenase domain MID00_16095 IPR010061 Methylmalonate-semialdehyde dehydrogenase MID00_16100 IPR018212 Sodium/solute symporter, conserved site MID00_16100 IPR014083 Cation/acetate symporter ActP MID00_16100 IPR038377 Sodium/glucose symporter superfamily MID00_16100 IPR001734 Sodium/solute symporter MID00_16105 IPR007436 Protein of unknown function DUF485 MID00_16110 IPR029045 ClpP/crotonase-like domain superfamily MID00_16110 IPR001753 Enoyl-CoA hydratase/isomerase MID00_16110 IPR014748 Enoyl-CoA hydratase, C-terminal MID00_16110 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site MID00_16115 IPR025110 AMP-binding enzyme, C-terminal domain MID00_16115 IPR020845 AMP-binding, conserved site MID00_16115 IPR000873 AMP-dependent synthetase/ligase MID00_16115 IPR042099 AMP-dependent synthetase-like superfamily MID00_16125 IPR007476 Putative exonuclease, RdgC MID00_16130 IPR020846 Major facilitator superfamily domain MID00_16130 IPR005828 Major facilitator, sugar transporter-like MID00_16130 IPR036259 MFS transporter superfamily MID00_16130 IPR004736 MFS transporter, metabolite:H symporter MID00_16130 IPR005829 Sugar transporter, conserved site MID00_16130 IPR011701 Major facilitator superfamily MID00_16135 IPR003594 Histidine kinase/HSP90-like ATPase MID00_16135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_16135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_16135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_16135 IPR003660 HAMP domain MID00_16135 IPR005467 Histidine kinase domain MID00_16135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_16140 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_16140 IPR016032 Signal transduction response regulator, C-terminal effector MID00_16140 IPR001789 Signal transduction response regulator, receiver domain MID00_16140 IPR039420 Transcriptional regulatory protein WalR-like MID00_16140 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_16140 IPR011006 CheY-like superfamily MID00_16145 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain MID00_16145 IPR020584 DNA recombination/repair protein RecA, conserved site MID00_16145 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface MID00_16145 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_16145 IPR023400 DNA recombination and repair protein RecA, C-terminal MID00_16145 IPR003593 AAA+ ATPase domain MID00_16145 IPR013765 DNA recombination and repair protein RecA MID00_16150 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_16150 IPR003783 Regulatory protein RecX MID00_16155 IPR000847 Transcription regulator HTH, LysR MID00_16155 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_16155 IPR036390 Winged helix DNA-binding domain superfamily MID00_16155 IPR005119 LysR, substrate-binding MID00_16155 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain MID00_16160 IPR038071 UROD/MetE-like superfamily MID00_16160 IPR006276 Cobalamin-independent methionine synthase MID00_16160 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal MID00_16160 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal MID00_16170 IPR016102 Succinyl-CoA synthetase-like MID00_16170 IPR005811 ATP-citrate lyase/succinyl-CoA ligase MID00_16170 IPR005809 Succinate--CoA synthetase, beta subunit MID00_16170 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site MID00_16170 IPR013815 ATP-grasp fold, subdomain 1 MID00_16170 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type MID00_16170 IPR011761 ATP-grasp fold MID00_16175 IPR005810 Succinyl-CoA ligase, alpha subunit MID00_16175 IPR005811 ATP-citrate lyase/succinyl-CoA ligase MID00_16175 IPR036291 NAD(P)-binding domain superfamily MID00_16175 IPR016102 Succinyl-CoA synthetase-like MID00_16175 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site MID00_16175 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site MID00_16175 IPR003781 CoA-binding MID00_16180 IPR022301 Integral membrane protein YjbE MID00_16180 IPR005496 Integral membrane protein TerC MID00_16185 IPR022417 Porphobilinogen deaminase, N-terminal MID00_16185 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily MID00_16185 IPR000860 Porphobilinogen deaminase MID00_16185 IPR022418 Porphobilinogen deaminase, C-terminal MID00_16185 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site MID00_16195 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX MID00_16205 IPR036649 Inorganic pyrophosphatase superfamily MID00_16205 IPR008162 Inorganic pyrophosphatase MID00_16210 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily MID00_16210 IPR011234 Fumarylacetoacetase-like, C-terminal MID00_16275 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_16275 IPR040079 Glutathione Transferase family MID00_16275 IPR004045 Glutathione S-transferase, N-terminal MID00_16275 IPR036249 Thioredoxin-like superfamily MID00_16275 IPR010987 Glutathione S-transferase, C-terminal-like MID00_16280 IPR024172 Streptomycin 3''-adenylyltransferase MID00_16280 IPR025184 Domain of unknown function DUF4111 MID00_16280 IPR002934 Polymerase, nucleotidyl transferase domain MID00_16295 IPR001405 Uncharacterised protein family UPF0758 MID00_16295 IPR010994 RuvA domain 2-like MID00_16295 IPR037518 MPN domain MID00_16295 IPR020891 Uncharacterised protein family UPF0758, conserved site MID00_16295 IPR025657 RadC-like JAB domain MID00_16320 IPR002898 MotA/TolQ/ExbB proton channel MID00_16320 IPR014163 Tol-Pal system, TolQ MID00_16325 IPR003400 Biopolymer transport protein ExbD/TolR MID00_16350 IPR023034 Peptidyl-prolyl isomerase SurA MID00_16350 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type MID00_16350 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site MID00_16350 IPR015391 SurA N-terminal MID00_16350 IPR027304 Trigger factor/SurA domain superfamily MID00_16375 IPR026325 Protein of unknown function DUF932 MID00_16380 IPR004437 ParB/RepB/Spo0J partition protein MID00_16380 IPR003115 ParB/Sulfiredoxin MID00_16380 IPR036086 ParB/Sulfiredoxin superfamily MID00_16385 IPR004914 Antirestriction protein MID00_16385 IPR042297 Antirestriction domain superfamily MID00_16405 IPR007948 Protein of unknown function DUF736 MID00_16460 IPR022789 Antitoxin ParD MID00_16460 IPR038296 Antitoxin ParD superfamily MID00_16460 IPR010985 Ribbon-helix-helix MID00_16485 IPR000847 Transcription regulator HTH, LysR MID00_16485 IPR005119 LysR, substrate-binding MID00_16485 IPR036390 Winged helix DNA-binding domain superfamily MID00_16485 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_16490 IPR003688 Type IV secretion system protein TraG/VirD4 MID00_16490 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_16500 IPR014149 Conjugative transfer, TrbB MID00_16500 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_16500 IPR001482 Type II/IV secretion system protein MID00_16515 IPR003593 AAA+ ATPase domain MID00_16515 IPR004346 CagE, TrbE, VirB component of type IV transporter system MID00_16515 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain MID00_16515 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_16545 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI MID00_16545 IPR042217 Type IV secretion system, VirB10/TrbI MID00_16630 IPR014004 Transport-associated and nodulation domain, bacteria MID00_16630 IPR007055 BON domain MID00_16630 IPR001775 GspD/PilQ family MID00_16630 IPR032789 Pilus formation protein, N-terminal MID00_16630 IPR004846 Type II/III secretion system MID00_16635 IPR022399 Helicase/secretion neighbourhood ATPase MID00_16635 IPR001482 Type II/IV secretion system protein MID00_16635 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_16660 IPR002575 Aminoglycoside phosphotransferase MID00_16660 IPR005280 Homoserine kinase, type II MID00_16660 IPR011009 Protein kinase-like domain superfamily MID00_16665 IPR001269 tRNA-dihydrouridine synthase MID00_16665 IPR013785 Aldolase-type TIM barrel MID00_16665 IPR018517 tRNA-dihydrouridine synthase, conserved site MID00_16665 IPR035587 DUS-like, FMN-binding domain MID00_16665 IPR004653 tRNA-dihydrouridine(20/20a) synthase MID00_16675 IPR017039 Virulence factor BrkB MID00_16675 IPR023679 Uncharacterised protein family UPF0761, bacterial MID00_16685 IPR003846 Protein adenylyltransferase SelO MID00_16690 IPR035904 Chorismate synthase AroC superfamily MID00_16690 IPR000453 Chorismate synthase MID00_16690 IPR020541 Chorismate synthase, conserved site MID00_16700 IPR001789 Signal transduction response regulator, receiver domain MID00_16700 IPR013656 PAS fold-4 MID00_16700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_16700 IPR000700 PAS-associated, C-terminal MID00_16700 IPR035965 PAS domain superfamily MID00_16700 IPR003594 Histidine kinase/HSP90-like ATPase MID00_16700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_16700 IPR005467 Histidine kinase domain MID00_16700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_16700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_16700 IPR001610 PAC motif MID00_16700 IPR011006 CheY-like superfamily MID00_16700 IPR000014 PAS domain MID00_16705 IPR016032 Signal transduction response regulator, C-terminal effector MID00_16705 IPR001789 Signal transduction response regulator, receiver domain MID00_16705 IPR011006 CheY-like superfamily MID00_16705 IPR000792 Transcription regulator LuxR, C-terminal MID00_16705 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_16715 IPR004675 Alkylhydroperoxidase AhpD core MID00_16715 IPR029032 AhpD-like MID00_16715 IPR003779 Carboxymuconolactone decarboxylase-like MID00_16720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_16720 IPR000524 Transcription regulator HTH, GntR MID00_16720 IPR015424 Pyridoxal phosphate-dependent transferase MID00_16720 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_16720 IPR036390 Winged helix DNA-binding domain superfamily MID00_16720 IPR004839 Aminotransferase, class I/classII MID00_16725 IPR033941 3-Isopropylmalate dehydratase, catalytic domain MID00_16725 IPR036008 Aconitase, iron-sulfur domain MID00_16725 IPR004430 3-isopropylmalate dehydratase, large subunit MID00_16725 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 MID00_16725 IPR018136 Aconitase family, 4Fe-4S cluster binding site MID00_16725 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain MID00_16730 IPR004431 3-isopropylmalate dehydratase, small subunit MID00_16730 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain MID00_16730 IPR033940 3-isopropylmalate dehydratase, swivel domain MID00_16730 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MID00_16735 IPR004429 Isopropylmalate dehydrogenase MID00_16735 IPR024084 Isopropylmalate dehydrogenase-like domain MID00_16735 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site MID00_16740 IPR036291 NAD(P)-binding domain superfamily MID00_16740 IPR012080 Aspartate-semialdehyde dehydrogenase MID00_16740 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type MID00_16740 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site MID00_16740 IPR012280 Semialdehyde dehydrogenase, dimerisation domain MID00_16740 IPR000534 Semialdehyde dehydrogenase, NAD-binding MID00_16750 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain MID00_16750 IPR001406 Pseudouridine synthase I, TruA MID00_16750 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_16750 IPR020095 Pseudouridine synthase I, TruA, C-terminal MID00_16760 IPR004681 TRAP transporter large membrane protein DctM MID00_16760 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit MID00_16765 IPR013785 Aldolase-type TIM barrel MID00_16765 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) MID00_16765 IPR011060 Ribulose-phosphate binding barrel MID00_16770 IPR013766 Thioredoxin domain MID00_16770 IPR013740 Redoxin MID00_16770 IPR036249 Thioredoxin-like superfamily MID00_16770 IPR017937 Thioredoxin, conserved site MID00_16780 IPR016833 Putative sodium bile acid cotransporter MID00_16780 IPR038770 Sodium/solute symporter superfamily MID00_16785 IPR011051 RmlC-like cupin domain superfamily MID00_16785 IPR018060 DNA binding HTH domain, AraC-type MID00_16785 IPR018062 HTH domain AraC-type, conserved site MID00_16785 IPR009057 Homeobox-like domain superfamily MID00_16790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_16790 IPR022310 NAD/GMP synthase MID00_16790 IPR025777 GMP synthetase ATP pyrophosphatase domain MID00_16790 IPR022955 GMP synthase MID00_16790 IPR001674 GMP synthase, C-terminal MID00_16790 IPR017926 Glutamine amidotransferase MID00_16790 IPR029062 Class I glutamine amidotransferase-like MID00_16790 IPR004739 GMP synthase, glutamine amidotransferase MID00_16795 IPR003691 Putative fluoride ion transporter CrcB MID00_16800 IPR025110 AMP-binding enzyme, C-terminal domain MID00_16800 IPR020845 AMP-binding, conserved site MID00_16800 IPR000873 AMP-dependent synthetase/ligase MID00_16800 IPR042099 AMP-dependent synthetase-like superfamily MID00_16805 IPR007551 Protein of unknown function DUF520 MID00_16805 IPR035571 UPF0234-like, C-terminal MID00_16805 IPR035570 UPF0234, N-terminal MID00_16805 IPR036183 YajQ-like superfamily MID00_16815 IPR000412 ABC-2 transporter MID00_16815 IPR013525 ABC-2 type transporter MID00_16820 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_16820 IPR017871 ABC transporter, conserved site MID00_16820 IPR003439 ABC transporter-like MID00_16820 IPR003593 AAA+ ATPase domain MID00_16825 IPR016193 Cytidine deaminase-like MID00_16825 IPR028883 tRNA-specific adenosine deaminase MID00_16825 IPR016192 APOBEC/CMP deaminase, zinc-binding MID00_16825 IPR002125 Cytidine and deoxycytidylate deaminase domain MID00_16830 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily MID00_16830 IPR029062 Class I glutamine amidotransferase-like MID00_16830 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal MID00_16830 IPR040449 LD-carboxypeptidase, N-terminal MID00_16830 IPR040921 LD-carboxypeptidase, C-terminal MID00_16830 IPR003507 Peptidase family S66 MID00_16835 IPR032781 ABC-transporter extension domain MID00_16835 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_16835 IPR003593 AAA+ ATPase domain MID00_16835 IPR003439 ABC transporter-like MID00_16840 IPR035647 EF-G domain III/V-like MID00_16840 IPR001498 Impact, N-terminal MID00_16840 IPR036956 Impact, N-terminal domain superfamily MID00_16840 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_16840 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site MID00_16840 IPR023582 Impact family MID00_16855 IPR036249 Thioredoxin-like superfamily MID00_16855 IPR005746 Thioredoxin MID00_16855 IPR017937 Thioredoxin, conserved site MID00_16855 IPR013766 Thioredoxin domain MID00_16860 IPR026033 Azaguanine-like transporters MID00_16860 IPR006043 Xanthine/uracil/vitamin C permease MID00_16865 IPR017861 Kae1/TsaD family MID00_16865 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD MID00_16865 IPR000905 Gcp-like domain MID00_16870 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY MID00_16875 IPR030048 Survival protein SurE MID00_16875 IPR002828 Survival protein SurE-like phosphatase/nucleotidase MID00_16875 IPR036523 SurE-like phosphatase/nucleotidase superfamily MID00_16880 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase MID00_16880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_16885 IPR011055 Duplicated hybrid motif MID00_16885 IPR018392 LysM domain MID00_16885 IPR036779 LysM domain superfamily MID00_16885 IPR016047 Peptidase M23 MID00_16890 IPR030390 RNA methyltransferase TrmA, active site MID00_16890 IPR012340 Nucleic acid-binding, OB-fold MID00_16890 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD MID00_16890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_16890 IPR002792 TRAM domain MID00_16890 IPR010280 (Uracil-5)-methyltransferase family MID00_16890 IPR030391 RNA methyltransferase TrmA, conserved site MID00_16895 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MID00_16895 IPR009057 Homeobox-like domain superfamily MID00_16895 IPR001647 DNA-binding HTH domain, TetR-type MID00_16895 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_16895 IPR003012 Tetracycline transcriptional regulator, TetR MID00_16895 IPR004111 Tetracycline repressor TetR, C-terminal MID00_16900 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_16900 IPR006076 FAD dependent oxidoreductase MID00_16905 IPR023343 Penicillin amidase type, domain 1 MID00_16905 IPR014395 Penicillin/GL-7-ACA/AHL acylase MID00_16905 IPR033813 Penicillin G acylase, C-terminal MID00_16905 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase MID00_16905 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_16925 IPR002104 Integrase, catalytic domain MID00_16925 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_16925 IPR023009 Tyrosine recombinase XerC/XerD MID00_16925 IPR011931 Tyrosine recombinase XerC MID00_16925 IPR004107 Integrase, SAM-like, N-terminal MID00_16925 IPR010998 Integrase/recombinase, N-terminal MID00_16925 IPR013762 Integrase-like, catalytic domain superfamily MID00_16935 IPR009049 Argininosuccinate lyase MID00_16935 IPR024083 Fumarase/histidase, N-terminal MID00_16935 IPR020557 Fumarate lyase, conserved site MID00_16935 IPR000362 Fumarate lyase family MID00_16935 IPR022761 Fumarate lyase, N-terminal MID00_16935 IPR008948 L-Aspartase-like MID00_16935 IPR029419 Argininosuccinate lyase, C-terminal MID00_16940 IPR010920 LSM domain superfamily MID00_16940 IPR006685 Mechanosensitive ion channel MscS MID00_16940 IPR011066 Mechanosensitive ion channel MscS, C-terminal MID00_16940 IPR030192 Miniconductance mechanosensitive channel YbdG MID00_16945 IPR002332 Nitrogen regulatory protein P-II, urydylation site MID00_16945 IPR017918 Nitrogen regulatory protein PII, conserved site MID00_16945 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MID00_16945 IPR011322 Nitrogen regulatory PII-like, alpha/beta MID00_16945 IPR002187 Nitrogen regulatory protein PII MID00_16950 IPR020471 Aldo/keto reductase MID00_16950 IPR023210 NADP-dependent oxidoreductase domain MID00_16950 IPR036812 NADP-dependent oxidoreductase domain superfamily MID00_16955 IPR011701 Major facilitator superfamily MID00_16955 IPR020846 Major facilitator superfamily domain MID00_16955 IPR036259 MFS transporter superfamily MID00_16960 IPR007440 Chorismate--pyruvate lyase MID00_16960 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily MID00_16965 IPR036986 RNA-binding S4 domain superfamily MID00_16965 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site MID00_16965 IPR006145 Pseudouridine synthase, RsuA/RluA MID00_16965 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F MID00_16965 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain MID00_16965 IPR002942 RNA-binding S4 domain MID00_16965 IPR020103 Pseudouridine synthase, catalytic domain superfamily MID00_16970 IPR002052 DNA methylase, N-6 adenine-specific, conserved site MID00_16970 IPR007473 Ribosomal RNA large subunit methyltransferase J MID00_16970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_16975 IPR030395 Glycerophosphodiester phosphodiesterase domain MID00_16975 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily MID00_16980 IPR027304 Trigger factor/SurA domain superfamily MID00_16980 IPR023034 Peptidyl-prolyl isomerase SurA MID00_16980 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site MID00_16980 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type MID00_16980 IPR015391 SurA N-terminal MID00_16985 IPR018392 LysM domain MID00_16985 IPR013731 Opacity-associated protein A, N-terminal MID00_16985 IPR016047 Peptidase M23 MID00_16985 IPR011055 Duplicated hybrid motif MID00_16990 IPR004471 Branched-chain amino acid transport, AzlC MID00_16990 IPR011606 Branched-chain amino acid transport, permease MID00_17000 IPR033655 RelA, TGS domain MID00_17000 IPR012676 TGS-like MID00_17000 IPR012675 Beta-grasp domain superfamily MID00_17000 IPR007685 RelA/SpoT MID00_17000 IPR002912 ACT domain MID00_17000 IPR003607 HD/PDEase domain MID00_17000 IPR004811 RelA/SpoT family MID00_17000 IPR004095 TGS MID00_17005 IPR003716 DNA-directed RNA polymerase, omega subunit MID00_17005 IPR006110 RNA polymerase, subunit omega/K/RPB6 MID00_17005 IPR012293 RNA polymerase subunit, RPB6/omega MID00_17005 IPR036161 RPB6/omega subunit-like superfamily MID00_17010 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17010 IPR020590 Guanylate kinase, conserved site MID00_17010 IPR017665 Guanylate kinase MID00_17010 IPR008144 Guanylate kinase-like domain MID00_17010 IPR008145 Guanylate kinase/L-type calcium channel beta subunit MID00_17030 IPR011193 Ornithine/lysine/arginine decarboxylase MID00_17030 IPR000310 Orn/Lys/Arg decarboxylase, major domain MID00_17030 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal MID00_17030 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily MID00_17030 IPR015424 Pyridoxal phosphate-dependent transferase MID00_17030 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal MID00_17030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_17030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_17035 IPR036390 Winged helix DNA-binding domain superfamily MID00_17035 IPR000847 Transcription regulator HTH, LysR MID00_17035 IPR005119 LysR, substrate-binding MID00_17035 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_17035 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain MID00_17045 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site MID00_17045 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_17045 IPR040442 Pyruvate kinase-like domain superfamily MID00_17045 IPR039556 ICL/PEPM domain MID00_17045 IPR012695 2-methylisocitrate lyase MID00_17055 IPR020615 Thiolase, acyl-enzyme intermediate active site MID00_17055 IPR020610 Thiolase, active site MID00_17055 IPR020617 Thiolase, C-terminal MID00_17055 IPR020616 Thiolase, N-terminal MID00_17055 IPR016039 Thiolase-like MID00_17055 IPR002155 Thiolase MID00_17060 IPR002155 Thiolase MID00_17060 IPR016039 Thiolase-like MID00_17060 IPR020610 Thiolase, active site MID00_17060 IPR020617 Thiolase, C-terminal MID00_17060 IPR020616 Thiolase, N-terminal MID00_17060 IPR020615 Thiolase, acyl-enzyme intermediate active site MID00_17080 IPR003593 AAA+ ATPase domain MID00_17080 IPR003439 ABC transporter-like MID00_17080 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17080 IPR012693 ABC transporter, phosphonate import, PhnC MID00_17080 IPR017871 ABC transporter, conserved site MID00_17085 IPR006143 RND efflux pump, membrane fusion protein MID00_17085 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MID00_17090 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 MID00_17090 IPR001036 Acriflavin resistance protein MID00_17090 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MID00_17095 IPR010131 RND efflux system, outer membrane lipoprotein, NodT MID00_17095 IPR003423 Outer membrane efflux protein MID00_17100 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ MID00_17100 IPR013785 Aldolase-type TIM barrel MID00_17100 IPR036130 Pyridoxine 5'-phosphate synthase MID00_17110 IPR015358 Transcription regulator MerR, DNA binding MID00_17110 IPR000551 MerR-type HTH domain MID00_17110 IPR009061 Putative DNA-binding domain superfamily MID00_17110 IPR011789 Cu(I)-responsive transcriptional regulator MID00_17115 IPR023753 FAD/NAD(P)-binding domain MID00_17115 IPR006258 Dihydrolipoamide dehydrogenase MID00_17115 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I MID00_17115 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MID00_17115 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site MID00_17115 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_17115 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_17120 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_17120 IPR001845 HTH ArsR-type DNA-binding domain MID00_17120 IPR011991 ArsR-like helix-turn-helix domain MID00_17120 IPR036390 Winged helix DNA-binding domain superfamily MID00_17125 IPR005517 Translation elongation factor EFG/EF2, domain IV MID00_17125 IPR000795 Transcription factor, GTP-binding domain MID00_17125 IPR005225 Small GTP-binding protein domain MID00_17125 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_17125 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_17125 IPR009000 Translation protein, beta-barrel domain superfamily MID00_17125 IPR031157 Tr-type G domain, conserved site MID00_17125 IPR004161 Translation elongation factor EFTu-like, domain 2 MID00_17125 IPR000640 Elongation factor EFG, domain V-like MID00_17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17125 IPR035647 EF-G domain III/V-like MID00_17125 IPR035649 EFG, domain V MID00_17125 IPR004540 Translation elongation factor EFG/EF2 MID00_17125 IPR009022 Elongation factor G, domain III MID00_17125 IPR041095 Elongation Factor G, domain II MID00_17130 IPR036249 Thioredoxin-like superfamily MID00_17130 IPR003782 Copper chaperone SCO1/SenC MID00_17135 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 MID00_17135 IPR001567 Peptidase M3A/M3B catalytic domain MID00_17140 IPR036291 NAD(P)-binding domain superfamily MID00_17140 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase MID00_17140 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MID00_17140 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site MID00_17140 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MID00_17145 IPR011006 CheY-like superfamily MID00_17145 IPR016032 Signal transduction response regulator, C-terminal effector MID00_17145 IPR001789 Signal transduction response regulator, receiver domain MID00_17145 IPR000792 Transcription regulator LuxR, C-terminal MID00_17145 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_17150 IPR001610 PAC motif MID00_17150 IPR013767 PAS fold MID00_17150 IPR003594 Histidine kinase/HSP90-like ATPase MID00_17150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_17150 IPR005467 Histidine kinase domain MID00_17150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_17150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_17150 IPR000014 PAS domain MID00_17150 IPR000700 PAS-associated, C-terminal MID00_17150 IPR035965 PAS domain superfamily MID00_17150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_17155 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal MID00_17155 IPR004660 Pyruvate dehydrogenase E1 component MID00_17155 IPR041621 Pyruvate dehydrogenase E1 component, middle domain MID00_17155 IPR029061 Thiamin diphosphate-binding fold MID00_17155 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II MID00_17155 IPR005474 Transketolase, N-terminal MID00_17160 IPR011053 Single hybrid motif MID00_17160 IPR004167 Peripheral subunit-binding domain MID00_17160 IPR036625 E3-binding domain superfamily MID00_17160 IPR000089 Biotin/lipoyl attachment MID00_17160 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex MID00_17160 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily MID00_17160 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site MID00_17160 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain MID00_17165 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MID00_17165 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site MID00_17165 IPR006258 Dihydrolipoamide dehydrogenase MID00_17165 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily MID00_17165 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I MID00_17165 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_17165 IPR023753 FAD/NAD(P)-binding domain MID00_17170 IPR001645 Folylpolyglutamate synthetase MID00_17170 IPR018109 Folylpolyglutamate synthetase, conserved site MID00_17170 IPR036565 Mur-like, catalytic domain superfamily MID00_17170 IPR004101 Mur ligase, C-terminal MID00_17170 IPR036615 Mur ligase, C-terminal domain superfamily MID00_17170 IPR013221 Mur ligase, central MID00_17180 IPR003825 Colicin V production, CvpA MID00_17185 IPR035584 Amidophosphoribosyltransferase, N-terminal MID00_17185 IPR000836 Phosphoribosyltransferase domain MID00_17185 IPR005854 Amidophosphoribosyltransferase MID00_17185 IPR029057 Phosphoribosyltransferase-like MID00_17185 IPR029055 Nucleophile aminohydrolases, N-terminal MID00_17185 IPR017932 Glutamine amidotransferase type 2 domain MID00_17190 IPR001466 Beta-lactamase-related MID00_17190 IPR012338 Beta-lactamase/transpeptidase-like MID00_17190 IPR023650 Beta-lactamase, class-A active site MID00_17200 IPR002771 Multiple antibiotic resistance (MarC)-related MID00_17205 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme MID00_17205 IPR002934 Polymerase, nucleotidyl transferase domain MID00_17205 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase MID00_17205 IPR006674 HD domain MID00_17205 IPR003607 HD/PDEase domain MID00_17205 IPR002912 ACT domain MID00_17210 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 MID00_17210 IPR001714 Peptidase M24, methionine aminopeptidase MID00_17210 IPR000994 Peptidase M24 MID00_17210 IPR036005 Creatinase/aminopeptidase-like MID00_17215 IPR001865 Ribosomal protein S2 MID00_17215 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid MID00_17215 IPR018130 Ribosomal protein S2, conserved site MID00_17215 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily MID00_17220 IPR009060 UBA-like superfamily MID00_17220 IPR018101 Translation elongation factor Ts, conserved site MID00_17220 IPR001816 Translation elongation factor EFTs/EF1B MID00_17220 IPR036402 Elongation factor Ts, dimerisation domain superfamily MID00_17220 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation MID00_17225 IPR036393 Acetylglutamate kinase-like superfamily MID00_17225 IPR001048 Aspartate/glutamate/uridylate kinase MID00_17225 IPR011817 Uridylate kinase MID00_17225 IPR015963 Uridylate kinase, bacteria MID00_17230 IPR002661 Ribosome recycling factor MID00_17230 IPR023584 Ribosome recycling factor domain MID00_17230 IPR036191 RRF superfamily MID00_17235 IPR036424 Decaprenyl diphosphate synthase-like superfamily MID00_17235 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site MID00_17235 IPR001441 Decaprenyl diphosphate synthase-like MID00_17240 IPR000374 Phosphatidate cytidylyltransferase MID00_17245 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase MID00_17245 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal MID00_17245 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal MID00_17245 IPR026877 DXP reductoisomerase C-terminal domain MID00_17245 IPR036169 DXP reductoisomerase, C-terminal domain superfamily MID00_17245 IPR036291 NAD(P)-binding domain superfamily MID00_17250 IPR001478 PDZ domain MID00_17250 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase MID00_17250 IPR036034 PDZ superfamily MID00_17250 IPR041489 PDZ domain 6 MID00_17250 IPR008915 Peptidase M50 MID00_17255 IPR000184 Bacterial surface antigen (D15) MID00_17255 IPR010827 POTRA domain, BamA/TamA-like MID00_17255 IPR039910 Surface antigen D15-like MID00_17255 IPR023707 Outer membrane protein assembly factor BamA MID00_17255 IPR034746 POTRA domain MID00_17260 IPR005632 Chaperone protein Skp MID00_17260 IPR024930 Skp domain superfamily MID00_17265 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region MID00_17265 IPR011004 Trimeric LpxA-like superfamily MID00_17265 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD MID00_17265 IPR001451 Hexapeptide repeat MID00_17270 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ MID00_17270 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ MID00_17270 IPR029069 HotDog domain superfamily MID00_17275 IPR011004 Trimeric LpxA-like superfamily MID00_17275 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase MID00_17275 IPR001451 Hexapeptide repeat MID00_17275 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily MID00_17275 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal MID00_17280 IPR003835 Glycosyl transferase, family 19 MID00_17285 IPR001352 Ribonuclease HII/HIII MID00_17285 IPR022898 Ribonuclease HII MID00_17285 IPR012337 Ribonuclease H-like superfamily MID00_17285 IPR036397 Ribonuclease H superfamily MID00_17285 IPR024567 Ribonuclease HII/HIII domain MID00_17290 IPR029064 50S ribosomal protein L30e-like MID00_17290 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MID00_17290 IPR013123 RNA 2-O ribose methyltransferase, substrate binding MID00_17290 IPR001537 tRNA/rRNA methyltransferase, SpoU type MID00_17290 IPR029028 Alpha/beta knot methyltransferases MID00_17295 IPR036928 Amidase signature (AS) superfamily MID00_17295 IPR023631 Amidase signature domain MID00_17295 IPR020556 Amidase, conserved site MID00_17295 IPR000120 Amidase MID00_17300 IPR026530 Phosphoenolpyruvate synthase regulatory protein MID00_17300 IPR005177 Bifunctional kinase-pyrophosphorylase MID00_17305 IPR008279 PEP-utilising enzyme, mobile domain MID00_17305 IPR013815 ATP-grasp fold, subdomain 1 MID00_17305 IPR000121 PEP-utilising enzyme, C-terminal MID00_17305 IPR023151 PEP-utilising enzyme, conserved site MID00_17305 IPR036637 Phosphohistidine domain superfamily MID00_17305 IPR018274 PEP-utilising enzyme, active site MID00_17305 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding MID00_17305 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_17305 IPR006319 Phosphoenolpyruvate synthase MID00_17305 IPR040442 Pyruvate kinase-like domain superfamily MID00_17310 IPR009057 Homeobox-like domain superfamily MID00_17310 IPR001647 DNA-binding HTH domain, TetR-type MID00_17310 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_17315 IPR023753 FAD/NAD(P)-binding domain MID00_17315 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_17320 IPR023620 Small protein B MID00_17320 IPR000037 SsrA-binding protein MID00_17320 IPR020081 SsrA-binding protein, conserved site MID00_17325 IPR005031 Coenzyme Q-binding protein COQ10, START domain MID00_17325 IPR023393 START-like domain superfamily MID00_17330 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MID00_17330 IPR037021 RnfH superfamily MID00_17330 IPR005346 RnfH protein MID00_17335 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_17335 IPR006089 Acyl-CoA dehydrogenase, conserved site MID00_17335 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_17335 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_17335 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_17335 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_17335 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_17345 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain MID00_17345 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site MID00_17345 IPR036291 NAD(P)-binding domain superfamily MID00_17345 IPR011548 3-hydroxyisobutyrate dehydrogenase MID00_17345 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding MID00_17345 IPR013328 6-phosphogluconate dehydrogenase, domain 2 MID00_17345 IPR015815 3-hydroxyisobutyrate dehydrogenase-related MID00_17345 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_17350 IPR028896 Aminomethyltransferase-like MID00_17350 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal MID00_17350 IPR017703 YgfZ/GcvT conserved site MID00_17350 IPR006222 Aminomethyltransferase, folate-binding domain MID00_17355 IPR003770 Endolytic murein transglycosylase MID00_17365 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17365 IPR015199 DNA polymerase III, delta subunit, C-terminal MID00_17365 IPR004622 DNA polymerase III, delta prime subunit MID00_17365 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal MID00_17370 IPR018228 Deoxyribonuclease, TatD-related, conserved site MID00_17370 IPR001130 TatD family MID00_17370 IPR032466 Metal-dependent hydrolase MID00_17370 IPR015991 Uncharacterised hydrolase TatD-type MID00_17385 IPR005025 NADPH-dependent FMN reductase-like MID00_17385 IPR029039 Flavoprotein-like superfamily MID00_17400 IPR004046 Glutathione S-transferase, C-terminal MID00_17400 IPR004045 Glutathione S-transferase, N-terminal MID00_17400 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_17400 IPR036249 Thioredoxin-like superfamily MID00_17400 IPR010987 Glutathione S-transferase, C-terminal-like MID00_17405 IPR036249 Thioredoxin-like superfamily MID00_17405 IPR006660 Arsenate reductase-like MID00_17405 IPR006659 Arsenate reductase MID00_17410 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily MID00_17410 IPR023480 Uncharacterised protein family UPF0312/YceI MID00_17410 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MID00_17420 IPR016174 Di-haem cytochrome, transmembrane MID00_17420 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase MID00_17450 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_17450 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_17450 IPR036291 NAD(P)-binding domain superfamily MID00_17455 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain MID00_17455 IPR010223 ATP binding protein MinD, bacterial-type MID00_17455 IPR025501 ATP binding protein MinD MID00_17455 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17500 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_17500 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17500 IPR001650 Helicase, C-terminal MID00_17500 IPR000330 SNF2-related, N-terminal domain MID00_17500 IPR038718 SNF2-like, N-terminal domain superfamily MID00_17500 IPR022138 Helicase SWF/SNF-related MID00_17515 IPR008490 Transposase InsH, N-terminal MID00_17515 IPR002559 Transposase, IS4-like MID00_17525 IPR018636 Protein of unknown function DUF2058 MID00_17530 IPR029787 Nucleotide cyclase MID00_17530 IPR005330 MHYT domain MID00_17530 IPR000160 GGDEF domain MID00_17530 IPR035919 EAL domain superfamily MID00_17530 IPR001633 EAL domain MID00_17590 IPR037518 MPN domain MID00_17590 IPR025657 RadC-like JAB domain MID00_17590 IPR020891 Uncharacterised protein family UPF0758, conserved site MID00_17590 IPR001405 Uncharacterised protein family UPF0758 MID00_17620 IPR025188 Domain of unknown function DUF4113 MID00_17620 IPR036775 DNA polymerase, Y-family, little finger domain superfamily MID00_17620 IPR017961 DNA polymerase, Y-family, little finger domain MID00_17620 IPR024728 DNA polymerase type-Y, HhH motif MID00_17620 IPR001126 UmuC domain MID00_17625 IPR015927 Peptidase S24/S26A/S26B/S26C MID00_17625 IPR006197 Peptidase S24, LexA-like MID00_17625 IPR036286 LexA/Signal peptidase-like superfamily MID00_17625 IPR039418 LexA-like MID00_17630 IPR006118 Recombinase, conserved site MID00_17630 IPR006119 Resolvase, N-terminal catalytic domain MID00_17630 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily MID00_17630 IPR006120 Resolvase, HTH domain MID00_17645 IPR032874 DDE domain MID00_17645 IPR001584 Integrase, catalytic core MID00_17645 IPR012337 Ribonuclease H-like superfamily MID00_17645 IPR036397 Ribonuclease H superfamily MID00_17655 IPR016181 Acyl-CoA N-acyltransferase MID00_17660 IPR011005 Dihydropteroate synthase-like MID00_17660 IPR000489 Pterin-binding domain MID00_17660 IPR006390 Dihydropteroate synthase MID00_17665 IPR000390 Small multidrug resistance protein family MID00_17680 IPR032874 DDE domain MID00_17680 IPR001584 Integrase, catalytic core MID00_17680 IPR012337 Ribonuclease H-like superfamily MID00_17680 IPR036397 Ribonuclease H superfamily MID00_17685 IPR009057 Homeobox-like domain superfamily MID00_17685 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_17685 IPR003012 Tetracycline transcriptional regulator, TetR MID00_17685 IPR004111 Tetracycline repressor TetR, C-terminal MID00_17685 IPR001647 DNA-binding HTH domain, TetR-type MID00_17685 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MID00_17690 IPR020846 Major facilitator superfamily domain MID00_17690 IPR011701 Major facilitator superfamily MID00_17690 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG MID00_17690 IPR005829 Sugar transporter, conserved site MID00_17690 IPR036259 MFS transporter superfamily MID00_17700 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_17700 IPR013762 Integrase-like, catalytic domain superfamily MID00_17700 IPR002104 Integrase, catalytic domain MID00_17700 IPR016423 Resolvase, Rsv MID00_17705 IPR036397 Ribonuclease H superfamily MID00_17705 IPR012337 Ribonuclease H-like superfamily MID00_17705 IPR001584 Integrase, catalytic core MID00_17705 IPR032874 DDE domain MID00_17725 IPR036249 Thioredoxin-like superfamily MID00_17725 IPR012336 Thioredoxin-like fold MID00_17725 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal MID00_17725 IPR017937 Thioredoxin, conserved site MID00_17725 IPR033954 Disulphide bond isomerase, DsbC/G MID00_17740 IPR002145 Ribbon-helix-helix protein, CopG MID00_17740 IPR010985 Ribbon-helix-helix MID00_17750 IPR021558 Antitoxin MazE-like MID00_17755 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_17755 IPR001650 Helicase, C-terminal MID00_17755 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17755 IPR038718 SNF2-like, N-terminal domain superfamily MID00_17755 IPR000330 SNF2-related, N-terminal domain MID00_17770 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class MID00_17770 IPR041405 Type III R-M EcoP15I, C-terminal MID00_17770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_17770 IPR002052 DNA methylase, N-6 adenine-specific, conserved site MID00_17770 IPR002941 DNA methylase N-4/N-6 MID00_17780 IPR014883 VRR-NUC domain MID00_17780 IPR006935 Helicase/UvrB, N-terminal MID00_17780 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17900 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_17900 IPR022489 Polyphosphate:AMP phosphotransferase MID00_17900 IPR022488 Polyphosphate kinase-2-related MID00_17910 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type MID00_17910 IPR013815 ATP-grasp fold, subdomain 1 MID00_17910 IPR016185 Pre-ATP-grasp domain superfamily MID00_17910 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase MID00_17910 IPR011054 Rudiment single hybrid motif MID00_17910 IPR011761 ATP-grasp fold MID00_17915 IPR001117 Multicopper oxidase, type 1 MID00_17915 IPR011706 Multicopper oxidase, type 2 MID00_17915 IPR011707 Multicopper oxidase, type 3 MID00_17915 IPR002355 Multicopper oxidase, copper-binding site MID00_17915 IPR008972 Cupredoxin MID00_17915 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_17925 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_17925 IPR013762 Integrase-like, catalytic domain superfamily MID00_17925 IPR002104 Integrase, catalytic domain MID00_17925 IPR010998 Integrase/recombinase, N-terminal MID00_17925 IPR004107 Integrase, SAM-like, N-terminal MID00_17925 IPR011931 Tyrosine recombinase XerC MID00_17925 IPR023009 Tyrosine recombinase XerC/XerD MID00_17925 IPR011932 Tyrosine recombinase XerD MID00_17930 IPR005119 LysR, substrate-binding MID00_17930 IPR000847 Transcription regulator HTH, LysR MID00_17930 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_17930 IPR036390 Winged helix DNA-binding domain superfamily MID00_17945 IPR019884 YtoQ family protein MID00_17950 IPR023298 P-type ATPase, transmembrane domain superfamily MID00_17950 IPR006121 Heavy metal-associated domain, HMA MID00_17950 IPR036163 Heavy metal-associated domain superfamily MID00_17950 IPR027256 P-type ATPase, subfamily IB MID00_17950 IPR001757 P-type ATPase MID00_17950 IPR023214 HAD superfamily MID00_17950 IPR006122 Heavy metal-associated domain, copper ion-binding MID00_17950 IPR008250 P-type ATPase, A domain superfamily MID00_17950 IPR017969 Heavy-metal-associated, conserved site MID00_17950 IPR018303 P-type ATPase, phosphorylation site MID00_17950 IPR023299 P-type ATPase, cytoplasmic domain N MID00_17950 IPR036412 HAD-like superfamily MID00_17965 IPR000847 Transcription regulator HTH, LysR MID00_17965 IPR036390 Winged helix DNA-binding domain superfamily MID00_17965 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_17965 IPR005119 LysR, substrate-binding MID00_17975 IPR020846 Major facilitator superfamily domain MID00_17975 IPR004747 Cyanate transport system protein MID00_17975 IPR011701 Major facilitator superfamily MID00_17975 IPR036259 MFS transporter superfamily MID00_17980 IPR036909 Cytochrome c-like domain superfamily MID00_17980 IPR009056 Cytochrome c-like domain MID00_17980 IPR002324 Cytochrome c, class ID MID00_17985 IPR006016 UspA MID00_17985 IPR006015 Universal stress protein A family MID00_17985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_17990 IPR011042 Six-bladed beta-propeller, TolB-like MID00_17990 IPR012938 Glucose/Sorbosone dehydrogenase MID00_17990 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase MID00_17995 IPR024083 Fumarase/histidase, N-terminal MID00_17995 IPR008948 L-Aspartase-like MID00_17995 IPR005677 Fumarate hydratase, class II MID00_17995 IPR022761 Fumarate lyase, N-terminal MID00_17995 IPR018951 Fumarase C, C-terminal MID00_17995 IPR020557 Fumarate lyase, conserved site MID00_17995 IPR000362 Fumarate lyase family MID00_18000 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain MID00_18000 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site MID00_18000 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family MID00_18000 IPR006422 D-erythrose-4-phosphate dehydrogenase MID00_18000 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I MID00_18000 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain MID00_18000 IPR036291 NAD(P)-binding domain superfamily MID00_18005 IPR036291 NAD(P)-binding domain superfamily MID00_18005 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_18005 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_18010 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site MID00_18010 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MID00_18010 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain MID00_18010 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 MID00_18010 IPR036291 NAD(P)-binding domain superfamily MID00_18015 IPR011042 Six-bladed beta-propeller, TolB-like MID00_18015 IPR029058 Alpha/Beta hydrolase fold MID00_18015 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain MID00_18020 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_18020 IPR010987 Glutathione S-transferase, C-terminal-like MID00_18020 IPR004045 Glutathione S-transferase, N-terminal MID00_18020 IPR040079 Glutathione Transferase family MID00_18020 IPR036249 Thioredoxin-like superfamily MID00_18020 IPR004046 Glutathione S-transferase, C-terminal MID00_18025 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18025 IPR017871 ABC transporter, conserved site MID00_18025 IPR003439 ABC transporter-like MID00_18025 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_18025 IPR003593 AAA+ ATPase domain MID00_18030 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18030 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_18030 IPR017871 ABC transporter, conserved site MID00_18030 IPR003439 ABC transporter-like MID00_18030 IPR003593 AAA+ ATPase domain MID00_18035 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal MID00_18035 IPR001851 ABC transporter, permease MID00_18040 IPR001851 ABC transporter, permease MID00_18045 IPR000709 Leu/Ile/Val-binding protein MID00_18045 IPR028081 Leucine-binding protein domain MID00_18045 IPR028082 Periplasmic binding protein-like I MID00_18050 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal MID00_18050 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain MID00_18050 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily MID00_18050 IPR036291 NAD(P)-binding domain superfamily MID00_18050 IPR000304 Pyrroline-5-carboxylate reductase MID00_18055 IPR006061 Solute-binding family 1, conserved site MID00_18055 IPR006059 Bacterial extracellular solute-binding protein MID00_18060 IPR035906 MetI-like superfamily MID00_18060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_18065 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE MID00_18065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_18065 IPR035906 MetI-like superfamily MID00_18070 IPR003593 AAA+ ATPase domain MID00_18070 IPR017871 ABC transporter, conserved site MID00_18070 IPR008995 Molybdate/tungstate binding, C-terminal MID00_18070 IPR040582 MalK, OB fold domain MID00_18070 IPR003439 ABC transporter-like MID00_18070 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18070 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC MID00_18075 IPR028082 Periplasmic binding protein-like I MID00_18075 IPR028081 Leucine-binding protein domain MID00_18075 IPR000709 Leu/Ile/Val-binding protein MID00_18080 IPR008331 Ferritin/DPS protein domain MID00_18080 IPR009078 Ferritin-like superfamily MID00_18080 IPR002177 DNA-binding protein Dps MID00_18080 IPR012347 Ferritin-like MID00_18080 IPR023188 DNA-binding protein Dps, conserved site MID00_18085 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_18085 IPR000847 Transcription regulator HTH, LysR MID00_18085 IPR005119 LysR, substrate-binding MID00_18085 IPR036390 Winged helix DNA-binding domain superfamily MID00_18090 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18090 IPR012340 Nucleic acid-binding, OB-fold MID00_18090 IPR001650 Helicase, C-terminal MID00_18090 IPR004609 ATP-dependent DNA helicase RecG MID00_18090 IPR011545 DEAD/DEAH box helicase domain MID00_18090 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_18090 IPR033454 RecG, wedge domain MID00_18095 IPR006175 YjgF/YER057c/UK114 family MID00_18095 IPR006056 RidA family MID00_18095 IPR019897 RidA, conserved site MID00_18095 IPR035959 RutC-like superfamily MID00_18100 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase MID00_18100 IPR017938 Riboflavin synthase-like beta-barrel MID00_18100 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_18100 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_18100 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_18100 IPR033892 Ferredoxin--NADP reductase, bacteria MID00_18100 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_18105 IPR026045 Ferric binding protein MID00_18110 IPR005667 Sulphate ABC transporter permease protein 2 MID00_18110 IPR035906 MetI-like superfamily MID00_18110 IPR011865 Sulphate ABC transporter, permease protein CysT MID00_18110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_18115 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18115 IPR008995 Molybdate/tungstate binding, C-terminal MID00_18115 IPR013611 Transport-associated OB, type 2 MID00_18115 IPR017871 ABC transporter, conserved site MID00_18115 IPR003439 ABC transporter-like MID00_18115 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit MID00_18115 IPR003593 AAA+ ATPase domain MID00_18130 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_18130 IPR005119 LysR, substrate-binding MID00_18130 IPR000847 Transcription regulator HTH, LysR MID00_18130 IPR036390 Winged helix DNA-binding domain superfamily MID00_18135 IPR016181 Acyl-CoA N-acyltransferase MID00_18135 IPR000182 GNAT domain MID00_18140 IPR001637 Glutamine synthetase class-I, adenylation site MID00_18140 IPR027302 Glutamine synthetase, N-terminal conserved site MID00_18140 IPR004809 Glutamine synthetase type I MID00_18140 IPR027303 Glutamine synthetase, glycine-rich site MID00_18140 IPR008146 Glutamine synthetase, catalytic domain MID00_18140 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain MID00_18140 IPR036651 Glutamine synthetase, N-terminal domain superfamily MID00_18140 IPR008147 Glutamine synthetase, beta-Grasp domain MID00_18145 IPR034505 Anaerobic coproporphyrinogen-III oxidase MID00_18145 IPR006638 Elp3/MiaB/NifB MID00_18145 IPR010723 HemN, C-terminal MID00_18145 IPR004559 Heme chaperone HemW-like MID00_18145 IPR007197 Radical SAM MID00_18145 IPR023404 Radical SAM, alpha/beta horseshoe MID00_18150 IPR029001 Inosine triphosphate pyrophosphatase-like MID00_18150 IPR002637 Ham1-like protein MID00_18150 IPR020922 dITP/XTP pyrophosphatase MID00_18155 IPR018336 Ribonuclease PH, conserved site MID00_18155 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_18155 IPR027408 PNPase/RNase PH domain superfamily MID00_18155 IPR002381 Ribonuclease PH, bacterial-type MID00_18155 IPR015847 Exoribonuclease, phosphorolytic domain 2 MID00_18155 IPR001247 Exoribonuclease, phosphorolytic domain 1 MID00_18155 IPR036345 Exoribonuclease, PH domain 2 superfamily MID00_18160 IPR041685 AAA domain, group 15 MID00_18160 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18165 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain MID00_18165 IPR004593 Nuclease SbcCD subunit D MID00_18165 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type MID00_18165 IPR029052 Metallo-dependent phosphatase-like MID00_18170 IPR005229 Conserved hypothetical protein CHP00255 MID00_18170 IPR013551 Domain of unknown function DUF1732 MID00_18170 IPR013527 YicC-like, N-terminal MID00_18175 IPR015376 Zinc ribbon, NADH pyrophosphatase MID00_18175 IPR015375 NADH pyrophosphatase-like, N-terminal MID00_18175 IPR022925 NADH pyrophosphatase NudC MID00_18175 IPR015797 NUDIX hydrolase-like domain superfamily MID00_18175 IPR000086 NUDIX hydrolase domain MID00_18185 IPR002938 FAD-binding domain MID00_18185 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_18205 IPR005829 Sugar transporter, conserved site MID00_18205 IPR036259 MFS transporter superfamily MID00_18205 IPR020846 Major facilitator superfamily domain MID00_18205 IPR011701 Major facilitator superfamily MID00_18205 IPR004812 Drug resistance transporter Bcr/CmlA subfamily MID00_18215 IPR017439 Amidohydrolase MID00_18215 IPR002933 Peptidase M20 MID00_18215 IPR011650 Peptidase M20, dimerisation domain MID00_18215 IPR036264 Bacterial exopeptidase dimerisation domain MID00_18220 IPR002068 Alpha crystallin/Hsp20 domain MID00_18220 IPR031107 Small heat shock protein HSP20 MID00_18220 IPR008978 HSP20-like chaperone MID00_18225 IPR006043 Xanthine/uracil/vitamin C permease MID00_18225 IPR017588 Uric acid permease UacT-like MID00_18225 IPR006042 Xanthine/uracil permease MID00_18230 IPR032466 Metal-dependent hydrolase MID00_18230 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_18230 IPR006680 Amidohydrolase-related MID00_18235 IPR004304 Acetamidase/Formamidase MID00_18245 IPR012910 TonB-dependent receptor, plug domain MID00_18245 IPR037066 TonB-dependent receptor, plug domain superfamily MID00_18245 IPR000531 TonB-dependent receptor-like, beta-barrel MID00_18245 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily MID00_18245 IPR010917 TonB-dependent receptor, conserved site MID00_18245 IPR039426 Vitamin B12 transporter BtuB-like MID00_18245 IPR010105 TonB-dependent siderophore receptor MID00_18250 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_18250 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MID00_18250 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MID00_18255 IPR005614 NrfD family MID00_18260 IPR006657 Molybdopterin dinucleotide-binding domain MID00_18260 IPR037946 Tetrathionate reductase subunit A, MopB domain MID00_18260 IPR009010 Aspartate decarboxylase-like domain superfamily MID00_18260 IPR006656 Molybdopterin oxidoreductase MID00_18260 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain MID00_18260 IPR041929 Tetrathionate reductase subunit A, N-terminal MID00_18265 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18265 IPR005337 RapZ-like family MID00_18270 IPR001783 Lumazine-binding protein MID00_18270 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily MID00_18270 IPR026017 Lumazine-binding domain MID00_18270 IPR017938 Riboflavin synthase-like beta-barrel MID00_18280 IPR036291 NAD(P)-binding domain superfamily MID00_18280 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_18280 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_18285 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A MID00_18285 IPR011251 Luciferase-like domain MID00_18285 IPR036661 Luciferase-like domain superfamily MID00_18290 IPR011283 Acetoacetyl-CoA reductase MID00_18290 IPR036291 NAD(P)-binding domain superfamily MID00_18290 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_18290 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_18300 IPR025713 Motility protein B, N-terminal domain MID00_18300 IPR006665 OmpA-like domain MID00_18300 IPR036737 OmpA-like domain superfamily MID00_18305 IPR000540 Flagellar motor protein MotA, conserved site MID00_18305 IPR002898 MotA/TolQ/ExbB proton channel MID00_18315 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A MID00_18315 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal MID00_18315 IPR012338 Beta-lactamase/transpeptidase-like MID00_18320 IPR036390 Winged helix DNA-binding domain superfamily MID00_18320 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_18320 IPR000847 Transcription regulator HTH, LysR MID00_18320 IPR005119 LysR, substrate-binding MID00_18325 IPR005064 Bordetella uptake gene MID00_18325 IPR042100 Bordetella uptake gene, domain 1 MID00_18360 IPR004805 DNA polymerase III, alpha subunit MID00_18360 IPR016195 Polymerase/histidinol phosphatase-like MID00_18360 IPR040982 DNA polymerase III alpha subunit finger domain MID00_18360 IPR004013 PHP domain MID00_18360 IPR003141 Polymerase/histidinol phosphatase, N-terminal MID00_18360 IPR023073 DNA polymerase, error-prone MID00_18360 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain MID00_18360 IPR029460 DNA polymerase, helix-hairpin-helix motif MID00_18365 IPR019004 Uncharacterised protein YqeY/Aim41 MID00_18365 IPR042184 YqeY/Aim41, N-terminal domain MID00_18365 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 MID00_18365 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like MID00_18375 IPR013785 Aldolase-type TIM barrel MID00_18375 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal MID00_18380 IPR036291 NAD(P)-binding domain superfamily MID00_18380 IPR006037 Regulator of K+ conductance, C-terminal MID00_18380 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily MID00_18380 IPR003148 Regulator of K+ conductance, N-terminal MID00_18385 IPR004772 TrkH potassium transport family MID00_18385 IPR003445 Cation transporter MID00_18400 IPR016187 C-type lectin fold MID00_18400 IPR005532 Sulfatase-modifying factor enzyme MID00_18400 IPR042095 Sulfatase-modifying factor enzyme superfamily MID00_18410 IPR038728 Uncharacterized membrane protein YkvI MID00_18415 IPR006076 FAD dependent oxidoreductase MID00_18415 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_18420 IPR011780 D-serine ammonia-lyase MID00_18420 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_18420 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site MID00_18420 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_18425 IPR041522 CdaR, GGDEF-like domain MID00_18425 IPR018060 DNA binding HTH domain, AraC-type MID00_18425 IPR009057 Homeobox-like domain superfamily MID00_18430 IPR013968 Polyketide synthase, ketoreductase domain MID00_18430 IPR042104 Polyketide synthase, dehydratase domain superfamily MID00_18430 IPR020843 Polyketide synthase, enoylreductase domain MID00_18430 IPR020806 Polyketide synthase, phosphopantetheine-binding domain MID00_18430 IPR016039 Thiolase-like MID00_18430 IPR009081 Phosphopantetheine binding ACP domain MID00_18430 IPR006162 Phosphopantetheine attachment site MID00_18430 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site MID00_18430 IPR020807 Polyketide synthase, dehydratase domain MID00_18430 IPR015083 Polyketide synthase, docking domain MID00_18430 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MID00_18430 IPR018201 Beta-ketoacyl synthase, active site MID00_18430 IPR036291 NAD(P)-binding domain superfamily MID00_18430 IPR032821 Ketoacyl-synthetase, C-terminal extension MID00_18430 IPR036736 ACP-like superfamily MID00_18430 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase MID00_18430 IPR013154 Alcohol dehydrogenase, N-terminal MID00_18430 IPR001227 Acyl transferase domain superfamily MID00_18430 IPR014031 Beta-ketoacyl synthase, C-terminal MID00_18430 IPR014030 Beta-ketoacyl synthase, N-terminal MID00_18430 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding MID00_18430 IPR011032 GroES-like superfamily MID00_18430 IPR014043 Acyl transferase MID00_18460 IPR016181 Acyl-CoA N-acyltransferase MID00_18460 IPR000182 GNAT domain MID00_18470 IPR009197 Microcystin LR degradation protein MlrC MID00_18470 IPR010799 Microcystin LR degradation protein MlrC, C-terminal MID00_18470 IPR015995 Microcystin LR degradation protein MlrC, N-terminal MID00_18475 IPR036264 Bacterial exopeptidase dimerisation domain MID00_18475 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site MID00_18475 IPR002933 Peptidase M20 MID00_18475 IPR011650 Peptidase M20, dimerisation domain MID00_18475 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria MID00_18480 IPR003010 Carbon-nitrogen hydrolase MID00_18480 IPR036526 Carbon-nitrogen hydrolase superfamily MID00_18485 IPR003593 AAA+ ATPase domain MID00_18485 IPR003439 ABC transporter-like MID00_18485 IPR017871 ABC transporter, conserved site MID00_18485 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal MID00_18485 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_18490 IPR035906 MetI-like superfamily MID00_18495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_18495 IPR035906 MetI-like superfamily MID00_18500 IPR000914 Solute-binding protein family 5 domain MID00_18500 IPR023765 Solute-binding protein family 5, conserved site MID00_18500 IPR006311 Twin-arginine translocation pathway, signal sequence MID00_18500 IPR030678 Peptide/nickel binding protein, MppA-type MID00_18500 IPR039424 Solute-binding protein family 5 MID00_18505 IPR010158 Amidase, carbamoylase-type MID00_18505 IPR036264 Bacterial exopeptidase dimerisation domain MID00_18505 IPR002933 Peptidase M20 MID00_18505 IPR011650 Peptidase M20, dimerisation domain MID00_18510 IPR001926 Pyridoxal-phosphate dependent enzyme MID00_18510 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme MID00_18510 IPR010081 Diaminopropionate ammonia-lyase MID00_18510 IPR019871 Diaminopropionate ammonia-lyase, subgroup MID00_18515 IPR009057 Homeobox-like domain superfamily MID00_18515 IPR000281 Helix-turn-helix protein RpiR MID00_18515 IPR035472 RpiR-like, SIS domain MID00_18515 IPR001347 Sugar isomerase (SIS) MID00_18515 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_18530 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA MID00_18530 IPR011990 Tetratricopeptide-like helical domain superfamily MID00_18530 IPR013026 Tetratricopeptide repeat-containing domain MID00_18530 IPR019734 Tetratricopeptide repeat MID00_18535 IPR002509 NodB homology domain MID00_18535 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel MID00_18535 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB MID00_18535 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal MID00_18540 IPR029044 Nucleotide-diphospho-sugar transferases MID00_18540 IPR001173 Glycosyltransferase 2-like MID00_18540 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA MID00_18555 IPR018893 Type VIII secretion system, CsgF MID00_18560 IPR005534 Curli production assembly/transport component CsgG MID00_18570 IPR011006 CheY-like superfamily MID00_18570 IPR000792 Transcription regulator LuxR, C-terminal MID00_18570 IPR016032 Signal transduction response regulator, C-terminal effector MID00_18570 IPR001789 Signal transduction response regulator, receiver domain MID00_18575 IPR034904 Fe-S cluster assembly domain superfamily MID00_18575 IPR002744 MIP18 family-like MID00_18580 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal MID00_18585 IPR000192 Aminotransferase class V domain MID00_18585 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MID00_18585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_18585 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_18585 IPR015424 Pyridoxal phosphate-dependent transferase MID00_18585 IPR010970 Cysteine desulfurase, SufS MID00_18590 IPR000825 SUF system FeS cluster assembly, SufBD MID00_18590 IPR037284 SUF system FeS cluster assembly, SufBD superfamily MID00_18590 IPR011542 SUF system FeS cluster assembly, SufD MID00_18595 IPR003593 AAA+ ATPase domain MID00_18595 IPR003439 ABC transporter-like MID00_18595 IPR017871 ABC transporter, conserved site MID00_18595 IPR010230 FeS cluster assembly SUF system, ATPase SufC MID00_18595 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18600 IPR010231 SUF system FeS cluster assembly, SufB MID00_18600 IPR000825 SUF system FeS cluster assembly, SufBD MID00_18600 IPR037284 SUF system FeS cluster assembly, SufBD superfamily MID00_18605 IPR030489 Transcription regulator Rrf2-type, conserved site MID00_18605 IPR010242 Transcription factor HTH, IscR MID00_18605 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_18605 IPR036390 Winged helix DNA-binding domain superfamily MID00_18605 IPR000944 Transcription regulator Rrf2-type MID00_18610 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18610 IPR003593 AAA+ ATPase domain MID00_18610 IPR011527 ABC transporter type 1, transmembrane domain MID00_18610 IPR036640 ABC transporter type 1, transmembrane domain superfamily MID00_18610 IPR003439 ABC transporter-like MID00_18610 IPR017871 ABC transporter, conserved site MID00_18610 IPR039421 Type I protein exporter MID00_18625 IPR011197 Uncharacterised conserved protein UCP012318 MID00_18625 IPR007402 Protein of unknown function DUF455 MID00_18625 IPR009078 Ferritin-like superfamily MID00_18635 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily MID00_18635 IPR000119 Histone-like DNA-binding protein MID00_18635 IPR020816 Histone-like DNA-binding protein, conserved site MID00_18635 IPR005684 Integration host factor, alpha subunit MID00_18640 IPR005147 tRNA synthetase, B5-domain MID00_18640 IPR009061 Putative DNA-binding domain superfamily MID00_18640 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain MID00_18640 IPR005121 Ferrodoxin-fold anticodon-binding domain MID00_18640 IPR002547 tRNA-binding domain MID00_18640 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 MID00_18640 IPR005146 B3/B4 tRNA-binding domain MID00_18640 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit MID00_18640 IPR012340 Nucleic acid-binding, OB-fold MID00_18640 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily MID00_18640 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain MID00_18645 IPR006195 Aminoacyl-tRNA synthetase, class II MID00_18645 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit MID00_18645 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal MID00_18645 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial MID00_18645 IPR002319 Phenylalanyl-tRNA synthetase MID00_18645 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm MID00_18650 IPR035566 Ribosomal protein L20, C-terminal MID00_18650 IPR005813 Ribosomal protein L20 MID00_18655 IPR018265 Ribosomal protein L35, conserved site MID00_18655 IPR001706 Ribosomal protein L35, non-mitochondrial MID00_18655 IPR037229 Ribosomal protein L35 superfamily MID00_18655 IPR021137 Ribosomal protein L35 MID00_18670 IPR003593 AAA+ ATPase domain MID00_18670 IPR004482 Mg chelatase-related protein MID00_18670 IPR025158 Mg chelatase-related protein, C-terminal domain MID00_18670 IPR000523 Magnesium chelatase ChlI domain MID00_18670 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18670 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_18670 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_18695 IPR008279 PEP-utilising enzyme, mobile domain MID00_18695 IPR040442 Pyruvate kinase-like domain superfamily MID00_18695 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily MID00_18695 IPR008731 Phosphotransferase system, enzyme I N-terminal MID00_18695 IPR006318 Phosphotransferase system, enzyme I-like MID00_18695 IPR036618 PtsI, HPr-binding domain superfamily MID00_18695 IPR036637 Phosphohistidine domain superfamily MID00_18695 IPR023151 PEP-utilising enzyme, conserved site MID00_18695 IPR000121 PEP-utilising enzyme, C-terminal MID00_18695 IPR024692 Phosphotransferase system, enzyme I MID00_18695 IPR018274 PEP-utilising enzyme, active site MID00_18700 IPR002114 Phosphotransferase system, HPr serine phosphorylation site MID00_18700 IPR035895 HPr-like superfamily MID00_18700 IPR000032 Phosphocarrier protein HPr-like MID00_18700 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site MID00_18710 IPR011761 ATP-grasp fold MID00_18710 IPR013815 ATP-grasp fold, subdomain 1 MID00_18710 IPR006284 Glutathione synthetase, prokaryotic MID00_18710 IPR004215 Prokaryotic glutathione synthetase, N-terminal MID00_18710 IPR016185 Pre-ATP-grasp domain superfamily MID00_18710 IPR004218 Prokaryotic glutathione synthetase, ATP-binding MID00_18715 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily MID00_18715 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily MID00_18715 IPR019813 Translation initiation factor 3, conserved site MID00_18715 IPR001288 Translation initiation factor 3 MID00_18715 IPR019815 Translation initiation factor 3, C-terminal MID00_18715 IPR019814 Translation initiation factor 3, N-terminal MID00_18720 IPR004095 TGS MID00_18720 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) MID00_18720 IPR033728 Threonine-tRNA ligase catalytic core domain MID00_18720 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily MID00_18720 IPR002320 Threonine-tRNA ligase, class IIa MID00_18720 IPR012676 TGS-like MID00_18720 IPR012947 Threonyl/alanyl tRNA synthetase, SAD MID00_18720 IPR036621 Anticodon-binding domain superfamily MID00_18720 IPR004154 Anticodon-binding MID00_18720 IPR006195 Aminoacyl-tRNA synthetase, class II MID00_18720 IPR012675 Beta-grasp domain superfamily MID00_18740 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site MID00_18740 IPR011611 Carbohydrate kinase PfkB MID00_18740 IPR002139 Ribokinase/fructokinase MID00_18740 IPR029056 Ribokinase-like MID00_18740 IPR030877 Sulfofructose kinase MID00_18750 IPR005590 Protein of unknown function DUF333 MID00_18765 IPR002810 NfeD-like, C-terminal domain MID00_18770 IPR036013 Band 7/SPFH domain superfamily MID00_18770 IPR001107 Band 7 domain MID00_18770 IPR032435 Band 7, C-terminal extension MID00_18770 IPR018080 Band 7/stomatin-like, conserved site MID00_18770 IPR001972 Stomatin family MID00_18790 IPR017588 Uric acid permease UacT-like MID00_18790 IPR006042 Xanthine/uracil permease MID00_18790 IPR006043 Xanthine/uracil/vitamin C permease MID00_18795 IPR006680 Amidohydrolase-related MID00_18795 IPR023512 Deaminase MtaD/DadD MID00_18795 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_18795 IPR032466 Metal-dependent hydrolase MID00_18805 IPR000843 LacI-type HTH domain MID00_18805 IPR010982 Lambda repressor-like, DNA-binding domain superfamily MID00_18805 IPR028082 Periplasmic binding protein-like I MID00_18815 IPR004778 Homoserine/Threonine efflux protein MID00_18815 IPR001123 Amino acid exporter protein, LeuE-type MID00_18820 IPR036259 MFS transporter superfamily MID00_18820 IPR020846 Major facilitator superfamily domain MID00_18820 IPR005829 Sugar transporter, conserved site MID00_18820 IPR011701 Major facilitator superfamily MID00_18820 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family MID00_18825 IPR036291 NAD(P)-binding domain superfamily MID00_18825 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_18825 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_18830 IPR017938 Riboflavin synthase-like beta-barrel MID00_18830 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_18830 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_18830 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase MID00_18830 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_18830 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_18830 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_18830 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_18830 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_18830 IPR012675 Beta-grasp domain superfamily MID00_18835 IPR032710 NTF2-like domain superfamily MID00_18835 IPR017641 Benzoate 1,2-dioxygenase, small subunit MID00_18835 IPR000391 Ring-hydroxylating dioxygenase beta subunit MID00_18840 IPR017941 Rieske [2Fe-2S] iron-sulphur domain MID00_18840 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily MID00_18840 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit MID00_18840 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain MID00_18840 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site MID00_18845 IPR036390 Winged helix DNA-binding domain superfamily MID00_18845 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_18845 IPR000847 Transcription regulator HTH, LysR MID00_18845 IPR005119 LysR, substrate-binding MID00_18850 IPR036010 2Fe-2S ferredoxin-like superfamily MID00_18850 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain MID00_18850 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site MID00_18850 IPR012675 Beta-grasp domain superfamily MID00_18850 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_18850 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_18850 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_18850 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_18850 IPR017938 Riboflavin synthase-like beta-barrel MID00_18855 IPR006756 Phenol hydroxylase MID00_18860 IPR007029 YHS domain MID00_18860 IPR012348 Ribonucleotide reductase-like MID00_18860 IPR009078 Ferritin-like superfamily MID00_18860 IPR003430 Methane/phenol/toluene hydroxylase MID00_18865 IPR003454 Monooxygenase component MmoB/DmpM MID00_18865 IPR036889 Monooxygenase component MmoB/DmpM superfamily MID00_18870 IPR009078 Ferritin-like superfamily MID00_18870 IPR012078 Methane/phenol monooxygenase, hydroxylase component MID00_18870 IPR003430 Methane/phenol/toluene hydroxylase MID00_18870 IPR012348 Ribonucleotide reductase-like MID00_18875 IPR010353 Phenol hydroxylase subunit MID00_18880 IPR002197 DNA binding HTH domain, Fis-type MID00_18880 IPR003593 AAA+ ATPase domain MID00_18880 IPR009057 Homeobox-like domain superfamily MID00_18880 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily MID00_18880 IPR025944 Sigma-54 interaction domain, conserved site MID00_18880 IPR002078 RNA polymerase sigma factor 54 interaction domain MID00_18880 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MID00_18880 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MID00_18880 IPR004096 4-vinyl reductase, 4VR MID00_18880 IPR010523 Activator of aromatic catabolism MID00_18880 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18900 IPR003593 AAA+ ATPase domain MID00_18900 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type MID00_18900 IPR003439 ABC transporter-like MID00_18900 IPR017871 ABC transporter, conserved site MID00_18900 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_18905 IPR035906 MetI-like superfamily MID00_18905 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_18905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_18910 IPR035906 MetI-like superfamily MID00_18910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_18910 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain MID00_18915 IPR001320 Ionotropic glutamate receptor MID00_18915 IPR018313 Solute-binding protein family 3, conserved site MID00_18915 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MID00_18940 IPR010879 Domain of unknown function DUF1508 MID00_18940 IPR036913 YegP-like superfamily MID00_18945 IPR004254 AdipoR/Haemolysin-III-related MID00_18945 IPR005744 Hly-III MID00_18960 IPR013108 Amidohydrolase 3 MID00_18960 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_18960 IPR032466 Metal-dependent hydrolase MID00_18960 IPR033932 YtcJ like MID00_18965 IPR023210 NADP-dependent oxidoreductase domain MID00_18965 IPR036812 NADP-dependent oxidoreductase domain superfamily MID00_18965 IPR020471 Aldo/keto reductase MID00_18970 IPR003473 Quinolinate synthetase A MID00_18970 IPR023513 Quinolinate synthase A, type 1 MID00_18970 IPR036094 Quinolinate synthetase A superfamily MID00_18975 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily MID00_18975 IPR005288 L-aspartate oxidase MID00_18975 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_18975 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily MID00_18975 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal MID00_18975 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain MID00_18980 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_18980 IPR006076 FAD dependent oxidoreductase MID00_18980 IPR023080 D-amino acid dehydrogenase DadA MID00_18990 IPR011856 tRNA endonuclease-like domain superfamily MID00_18990 IPR033315 Fanconi-associated nuclease 1-like MID00_18990 IPR014883 VRR-NUC domain MID00_18990 IPR040603 Fanconi-associated nuclease 1, SAP domain MID00_19000 IPR000620 EamA domain MID00_19000 IPR004779 Carboxylate/Amino Acid/Amine Transporter MID00_19005 IPR015424 Pyridoxal phosphate-dependent transferase MID00_19005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_19005 IPR000524 Transcription regulator HTH, GntR MID00_19005 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19005 IPR036390 Winged helix DNA-binding domain superfamily MID00_19005 IPR004839 Aminotransferase, class I/classII MID00_19005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_19010 IPR001608 Alanine racemase, N-terminal MID00_19010 IPR029066 PLP-binding barrel MID00_19010 IPR011078 Pyridoxal phosphate homeostasis protein MID00_19020 IPR020846 Major facilitator superfamily domain MID00_19020 IPR011701 Major facilitator superfamily MID00_19020 IPR036259 MFS transporter superfamily MID00_19025 IPR002938 FAD-binding domain MID00_19025 IPR036188 FAD/NAD(P)-binding domain superfamily MID00_19030 IPR000835 MarR-type HTH domain MID00_19030 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19030 IPR036390 Winged helix DNA-binding domain superfamily MID00_19055 IPR001189 Manganese/iron superoxide dismutase MID00_19055 IPR019833 Manganese/iron superoxide dismutase, binding site MID00_19055 IPR019832 Manganese/iron superoxide dismutase, C-terminal MID00_19055 IPR019831 Manganese/iron superoxide dismutase, N-terminal MID00_19055 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MID00_19055 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MID00_19060 IPR000792 Transcription regulator LuxR, C-terminal MID00_19060 IPR001789 Signal transduction response regulator, receiver domain MID00_19060 IPR011006 CheY-like superfamily MID00_19060 IPR016032 Signal transduction response regulator, C-terminal effector MID00_19065 IPR000286 Histone deacetylase family MID00_19065 IPR023801 Histone deacetylase domain MID00_19065 IPR037138 Histone deacetylase domain superfamily MID00_19065 IPR023696 Ureohydrolase domain superfamily MID00_19070 IPR003593 AAA+ ATPase domain MID00_19070 IPR017871 ABC transporter, conserved site MID00_19070 IPR012693 ABC transporter, phosphonate import, PhnC MID00_19070 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19070 IPR003439 ABC transporter-like MID00_19075 IPR003689 Zinc/iron permease MID00_19080 IPR006073 GTP binding domain MID00_19080 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19085 IPR006073 GTP binding domain MID00_19085 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19090 IPR004711 Benzoate transporter MID00_19095 IPR011008 Dimeric alpha-beta barrel MID00_19095 IPR026029 Muconolactone isomerase domain MID00_19095 IPR003464 Muconolactone delta-isomerase MID00_19100 IPR029058 Alpha/Beta hydrolase fold MID00_19100 IPR026968 3-oxoadipate enol-lactonase 1/2 MID00_19100 IPR022742 Serine aminopeptidase, S33 MID00_19100 IPR000073 Alpha/beta hydrolase fold-1 MID00_19105 IPR012791 3-oxoacid CoA-transferase, subunit B MID00_19105 IPR004165 Coenzyme A transferase family I MID00_19105 IPR004164 Coenzyme A transferase active site MID00_19105 IPR037171 NagB/RpiA transferase-like MID00_19110 IPR012792 3-oxoacid CoA-transferase, subunit A MID00_19110 IPR004165 Coenzyme A transferase family I MID00_19110 IPR004163 Coenzyme A transferase binding site MID00_19110 IPR037171 NagB/RpiA transferase-like MID00_19115 IPR007535 Catechol dioxygenase, N-terminal MID00_19115 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal MID00_19115 IPR015889 Intradiol ring-cleavage dioxygenase, core MID00_19115 IPR012801 Catechol 1,2-dioxygenase, proteobacteria MID00_19120 IPR029017 Enolase-like, N-terminal MID00_19120 IPR036849 Enolase-like, C-terminal domain superfamily MID00_19120 IPR013370 Muconate/chloromuconate cycloisomerase MID00_19120 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site MID00_19120 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal MID00_19120 IPR029065 Enolase C-terminal domain-like MID00_19120 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain MID00_19125 IPR036390 Winged helix DNA-binding domain superfamily MID00_19125 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19125 IPR000847 Transcription regulator HTH, LysR MID00_19125 IPR005119 LysR, substrate-binding MID00_19140 IPR000891 Pyruvate carboxyltransferase MID00_19140 IPR013785 Aldolase-type TIM barrel MID00_19140 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily MID00_19140 IPR005668 2-isopropylmalate synthase MID00_19140 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site MID00_19140 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain MID00_19140 IPR039371 LeuA, N-terminal catalytic TIM barrel domain MID00_19145 IPR023609 Transcription regulator HTH, RhaS MID00_19145 IPR020449 Transcription regulator HTH, AraC- type MID00_19145 IPR037923 Transcription regulator HTH-like MID00_19145 IPR018062 HTH domain AraC-type, conserved site MID00_19145 IPR018060 DNA binding HTH domain, AraC-type MID00_19145 IPR009057 Homeobox-like domain superfamily MID00_19145 IPR003313 AraC-type arabinose-binding/dimerisation domain MID00_19145 IPR014710 RmlC-like jelly roll fold MID00_19165 IPR001845 HTH ArsR-type DNA-binding domain MID00_19165 IPR036390 Winged helix DNA-binding domain superfamily MID00_19165 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19165 IPR011991 ArsR-like helix-turn-helix domain MID00_19170 IPR029032 AhpD-like MID00_19170 IPR004675 Alkylhydroperoxidase AhpD core MID00_19170 IPR003779 Carboxymuconolactone decarboxylase-like MID00_19190 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_19190 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal MID00_19190 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily MID00_19190 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_19190 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_19190 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_19190 IPR006089 Acyl-CoA dehydrogenase, conserved site MID00_19195 IPR025110 AMP-binding enzyme, C-terminal domain MID00_19195 IPR000873 AMP-dependent synthetase/ligase MID00_19195 IPR020845 AMP-binding, conserved site MID00_19200 IPR023606 CoA-transferase family III domain superfamily MID00_19200 IPR003673 CoA-transferase family III MID00_19205 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MID00_19205 IPR003749 Sulfur carrier ThiS/MoaD-like MID00_19205 IPR012675 Beta-grasp domain superfamily MID00_19210 IPR037518 MPN domain MID00_19210 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain MID00_19210 IPR028090 JAB domain, prokaryotic MID00_19215 IPR001763 Rhodanese-like domain MID00_19215 IPR035985 Ubiquitin-activating enzyme MID00_19215 IPR036873 Rhodanese-like domain superfamily MID00_19215 IPR000594 THIF-type NAD/FAD binding fold MID00_19225 IPR016461 O-methyltransferase COMT-type MID00_19225 IPR001077 O-methyltransferase domain MID00_19225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_19225 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19225 IPR036390 Winged helix DNA-binding domain superfamily MID00_19250 IPR001907 ATP-dependent Clp protease proteolytic subunit MID00_19250 IPR029045 ClpP/crotonase-like domain superfamily MID00_19250 IPR033135 ClpP, histidine active site MID00_19250 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MID00_19255 IPR010987 Glutathione S-transferase, C-terminal-like MID00_19255 IPR040079 Glutathione Transferase family MID00_19255 IPR036282 Glutathione S-transferase, C-terminal domain superfamily MID00_19255 IPR004045 Glutathione S-transferase, N-terminal MID00_19255 IPR036249 Thioredoxin-like superfamily MID00_19290 IPR005119 LysR, substrate-binding MID00_19290 IPR000847 Transcription regulator HTH, LysR MID00_19290 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19290 IPR036390 Winged helix DNA-binding domain superfamily MID00_19295 IPR004136 Nitronate monooxygenase MID00_19295 IPR013785 Aldolase-type TIM barrel MID00_19305 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain MID00_19305 IPR017938 Riboflavin synthase-like beta-barrel MID00_19305 IPR001433 Oxidoreductase FAD/NAD(P)-binding MID00_19305 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain MID00_19305 IPR017927 FAD-binding domain, ferredoxin reductase-type MID00_19305 IPR023950 Flavohemoprotein MID00_19305 IPR000971 Globin MID00_19305 IPR009050 Globin-like superfamily MID00_19305 IPR012292 Globin/Protoglobin MID00_19310 IPR014347 Tautomerase/MIF superfamily MID00_19310 IPR037479 Tautomerase, MSAD family MID00_19320 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase MID00_19320 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase MID00_19320 IPR029056 Ribokinase-like MID00_19325 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_19325 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response MID00_19325 IPR016032 Signal transduction response regulator, C-terminal effector MID00_19325 IPR001789 Signal transduction response regulator, receiver domain MID00_19325 IPR039420 Transcriptional regulatory protein WalR-like MID00_19325 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19325 IPR011006 CheY-like superfamily MID00_19330 IPR003594 Histidine kinase/HSP90-like ATPase MID00_19330 IPR001789 Signal transduction response regulator, receiver domain MID00_19330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_19330 IPR013656 PAS fold-4 MID00_19330 IPR035965 PAS domain superfamily MID00_19330 IPR000700 PAS-associated, C-terminal MID00_19330 IPR000014 PAS domain MID00_19330 IPR001610 PAC motif MID00_19330 IPR011006 CheY-like superfamily MID00_19330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_19330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_19330 IPR005467 Histidine kinase domain MID00_19330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_19340 IPR002823 Protein of unknown function DUF112, transmembrane MID00_19345 IPR006674 HD domain MID00_19345 IPR003607 HD/PDEase domain MID00_19350 IPR020846 Major facilitator superfamily domain MID00_19350 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG MID00_19350 IPR005829 Sugar transporter, conserved site MID00_19350 IPR011701 Major facilitator superfamily MID00_19350 IPR036259 MFS transporter superfamily MID00_19355 IPR036259 MFS transporter superfamily MID00_19355 IPR020846 Major facilitator superfamily domain MID00_19355 IPR011701 Major facilitator superfamily MID00_19355 IPR004638 Drug resistance transporter EmrB-like MID00_19355 IPR005829 Sugar transporter, conserved site MID00_19360 IPR036390 Winged helix DNA-binding domain superfamily MID00_19360 IPR000847 Transcription regulator HTH, LysR MID00_19360 IPR005119 LysR, substrate-binding MID00_19360 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19365 IPR026660 Phosphoribosyl-AMP cyclohydrolase MID00_19365 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain MID00_19365 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily MID00_19370 IPR036390 Winged helix DNA-binding domain superfamily MID00_19370 IPR002481 Ferric-uptake regulator MID00_19370 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19375 IPR006680 Amidohydrolase-related MID00_19375 IPR032466 Metal-dependent hydrolase MID00_19375 IPR004722 Dihydroorotase MID00_19375 IPR002195 Dihydroorotase, conserved site MID00_19375 IPR011059 Metal-dependent hydrolase, composite domain superfamily MID00_19380 IPR003808 Fe-S metabolism associated domain, SufE-like MID00_19380 IPR023939 Cysteine desulfuration protein SufE MID00_19385 IPR002696 Putative membrane protein insertion efficiency factor MID00_19390 IPR003801 GTP cyclohydrolase FolE2/MptA MID00_19390 IPR022838 GTP cyclohydrolase FolE2 MID00_19395 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MID00_19395 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19395 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MID00_19400 IPR026881 WYL domain MID00_19400 IPR001034 DeoR-type HTH domain MID00_19400 IPR013196 Helix-turn-helix, type 11 MID00_19400 IPR028349 Protein PafC MID00_19400 IPR036390 Winged helix DNA-binding domain superfamily MID00_19400 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19410 IPR034184 Putative acyl-CoA dehydrogenase AidB MID00_19410 IPR006089 Acyl-CoA dehydrogenase, conserved site MID00_19410 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain MID00_19410 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal MID00_19410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal MID00_19410 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily MID00_19410 IPR041504 Adaptive response protein AidB, N-terminal MID00_19420 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal MID00_19420 IPR038071 UROD/MetE-like superfamily MID00_19430 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal MID00_19430 IPR006276 Cobalamin-independent methionine synthase MID00_19430 IPR038071 UROD/MetE-like superfamily MID00_19430 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal MID00_19435 IPR036390 Winged helix DNA-binding domain superfamily MID00_19435 IPR000847 Transcription regulator HTH, LysR MID00_19435 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain MID00_19435 IPR005119 LysR, substrate-binding MID00_19435 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19445 IPR004739 GMP synthase, glutamine amidotransferase MID00_19445 IPR029062 Class I glutamine amidotransferase-like MID00_19445 IPR017926 Glutamine amidotransferase MID00_19445 IPR022955 GMP synthase MID00_19445 IPR022310 NAD/GMP synthase MID00_19445 IPR025777 GMP synthetase ATP pyrophosphatase domain MID00_19445 IPR001674 GMP synthase, C-terminal MID00_19445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_19465 IPR013785 Aldolase-type TIM barrel MID00_19465 IPR000644 CBS domain MID00_19465 IPR005990 Inosine-5'-monophosphate dehydrogenase MID00_19465 IPR015875 IMP dehydrogenase / GMP reductase, conserved site MID00_19465 IPR001093 IMP dehydrogenase/GMP reductase MID00_19470 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain MID00_19470 IPR029062 Class I glutamine amidotransferase-like MID00_19470 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal MID00_19470 IPR017926 Glutamine amidotransferase MID00_19470 IPR010073 Phosphoribosylformylglycinamidine synthase PurL MID00_19470 IPR010918 PurM-like, C-terminal domain MID00_19470 IPR036921 PurM-like, N-terminal domain superfamily MID00_19470 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily MID00_19470 IPR036676 PurM-like, C-terminal domain superfamily MID00_19475 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily MID00_19475 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal MID00_19475 IPR023459 Transcription elongation factor GreA/GreB family MID00_19475 IPR006358 Transcription elongation factor GreB MID00_19475 IPR028624 Transcription elongation factor GreA/GreB MID00_19475 IPR018151 Transcription elongation factor, GreA/GreB, conserved site MID00_19475 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily MID00_19475 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal MID00_19480 IPR004013 PHP domain MID00_19480 IPR003141 Polymerase/histidinol phosphatase, N-terminal MID00_19480 IPR016195 Polymerase/histidinol phosphatase-like MID00_19490 IPR035681 ComA-like, MBL domain MID00_19490 IPR004477 ComEC/Rec2-related protein MID00_19490 IPR004797 Competence protein ComEC/Rec2 MID00_19490 IPR001279 Metallo-beta-lactamase MID00_19490 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like MID00_19495 IPR001130 TatD family MID00_19495 IPR018228 Deoxyribonuclease, TatD-related, conserved site MID00_19495 IPR032466 Metal-dependent hydrolase MID00_19500 IPR003593 AAA+ ATPase domain MID00_19500 IPR003439 ABC transporter-like MID00_19500 IPR017871 ABC transporter, conserved site MID00_19500 IPR015854 ABC transporter, lipoprotein release, LolD MID00_19500 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19505 IPR003838 ABC transporter permease protein domain MID00_19505 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E MID00_19505 IPR025857 MacB-like periplasmic core domain MID00_19515 IPR041122 RecJ, OB domain MID00_19515 IPR004610 Bacterial RecJ exonuclease MID00_19515 IPR001667 DDH domain MID00_19515 IPR038763 DHH phosphoesterase superfamily MID00_19515 IPR003156 DHHA1 domain MID00_19525 IPR004710 Bile acid:sodium symporter MID00_19525 IPR038770 Sodium/solute symporter superfamily MID00_19525 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 MID00_19530 IPR000620 EamA domain MID00_19535 IPR012340 Nucleic acid-binding, OB-fold MID00_19535 IPR006196 RNA-binding domain, S1, IF1 type MID00_19535 IPR004368 Translation initiation factor IF-1 MID00_19540 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding MID00_19540 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily MID00_19540 IPR004090 Chemotaxis methyl-accepting receptor MID00_19540 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site MID00_19540 IPR003660 HAMP domain MID00_19540 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain MID00_19550 IPR036291 NAD(P)-binding domain superfamily MID00_19550 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_19550 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_19555 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) MID00_19555 IPR006195 Aminoacyl-tRNA synthetase, class II MID00_19555 IPR002313 Lysine-tRNA ligase, class II MID00_19555 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal MID00_19555 IPR012340 Nucleic acid-binding, OB-fold MID00_19555 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type MID00_19560 IPR005064 Bordetella uptake gene MID00_19560 IPR042100 Bordetella uptake gene, domain 1 MID00_19565 IPR004363 Methylglyoxal synthase MID00_19565 IPR011607 Methylglyoxal synthase-like domain MID00_19565 IPR036914 Methylglyoxal synthase-like domain superfamily MID00_19570 IPR011302 Iron-binding protein IscA, proteobacteria MID00_19570 IPR035903 HesB-like domain superfamily MID00_19570 IPR016092 FeS cluster insertion protein MID00_19570 IPR000361 FeS cluster biogenesis MID00_19570 IPR017870 FeS cluster insertion, C-terminal, conserved site MID00_19575 IPR011339 ISC system FeS cluster assembly, IscU scaffold MID00_19575 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal MID00_19580 IPR015424 Pyridoxal phosphate-dependent transferase MID00_19580 IPR000192 Aminotransferase class V domain MID00_19580 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MID00_19580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_19580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_19580 IPR010240 Cysteine desulfurase IscS MID00_19580 IPR016454 Cysteine desulfurase MID00_19585 IPR010242 Transcription factor HTH, IscR MID00_19585 IPR000944 Transcription regulator Rrf2-type MID00_19585 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19585 IPR036390 Winged helix DNA-binding domain superfamily MID00_19585 IPR030489 Transcription regulator Rrf2-type, conserved site MID00_19590 IPR023485 Phosphotyrosine protein phosphatase I MID00_19590 IPR036196 Phosphotyrosine protein phosphatase I superfamily MID00_19590 IPR017867 Protein-tyrosine phosphatase, low molecular weight MID00_19595 IPR006935 Helicase/UvrB, N-terminal MID00_19595 IPR014001 Helicase superfamily 1/2, ATP-binding domain MID00_19595 IPR001650 Helicase, C-terminal MID00_19595 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19595 IPR024759 UvrB, YAD/RRR-motif-containing domain MID00_19595 IPR004807 UvrABC system, subunit B MID00_19595 IPR041471 UvrB, interaction domain MID00_19595 IPR036876 UVR domain superfamily MID00_19595 IPR001943 UVR domain MID00_19600 IPR004839 Aminotransferase, class I/classII MID00_19600 IPR000796 Aspartate/other aminotransferase MID00_19600 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site MID00_19600 IPR015424 Pyridoxal phosphate-dependent transferase MID00_19600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_19600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_19605 IPR016181 Acyl-CoA N-acyltransferase MID00_19605 IPR000182 GNAT domain MID00_19610 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_19610 IPR039418 LexA-like MID00_19610 IPR036390 Winged helix DNA-binding domain superfamily MID00_19610 IPR006200 Transcription regulator LexA MID00_19610 IPR006199 LexA repressor, DNA-binding domain MID00_19610 IPR006197 Peptidase S24, LexA-like MID00_19610 IPR015927 Peptidase S24/S26A/S26B/S26C MID00_19610 IPR036286 LexA/Signal peptidase-like superfamily MID00_19615 IPR003959 ATPase, AAA-type, core MID00_19615 IPR003593 AAA+ ATPase domain MID00_19615 IPR020568 Ribosomal protein S5 domain 2-type fold MID00_19615 IPR015947 PUA-like superfamily MID00_19615 IPR008268 Peptidase S16, active site MID00_19615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MID00_19615 IPR003111 Lon, substrate-binding domain MID00_19615 IPR027065 Lon protease MID00_19615 IPR008269 Peptidase S16, Lon proteolytic domain MID00_19615 IPR004815 Lon protease, bacterial/eukaryotic-type MID00_19615 IPR027543 Lon protease, bacterial MID00_19615 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19620 IPR038366 Zinc finger, ClpX C4-type superfamily MID00_19620 IPR010603 Zinc finger, ClpX C4-type MID00_19620 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_19620 IPR019489 Clp ATPase, C-terminal MID00_19620 IPR003593 AAA+ ATPase domain MID00_19620 IPR004487 Clp protease, ATP-binding subunit ClpX MID00_19620 IPR003959 ATPase, AAA-type, core MID00_19625 IPR001907 ATP-dependent Clp protease proteolytic subunit MID00_19625 IPR029045 ClpP/crotonase-like domain superfamily MID00_19625 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MID00_19625 IPR033135 ClpP, histidine active site MID00_19630 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain MID00_19630 IPR008880 Trigger factor, C-terminal MID00_19630 IPR037041 Trigger factor, C-terminal domain superfamily MID00_19630 IPR008881 Trigger factor, ribosome-binding, bacterial MID00_19630 IPR036611 Trigger factor ribosome-binding domain superfamily MID00_19630 IPR005215 Trigger factor MID00_19630 IPR027304 Trigger factor/SurA domain superfamily MID00_19635 IPR023606 CoA-transferase family III domain superfamily MID00_19635 IPR003673 CoA-transferase family III MID00_19645 IPR002104 Integrase, catalytic domain MID00_19645 IPR013762 Integrase-like, catalytic domain superfamily MID00_19645 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_19645 IPR010998 Integrase/recombinase, N-terminal MID00_19670 IPR000726 Glycoside hydrolase, family 19, catalytic MID00_19670 IPR023346 Lysozyme-like domain superfamily MID00_19905 IPR019844 Cold-shock (CSD) domain MID00_19905 IPR012156 Cold shock, CspA MID00_19905 IPR002059 Cold-shock protein, DNA-binding MID00_19905 IPR011129 Cold shock domain MID00_19905 IPR012340 Nucleic acid-binding, OB-fold MID00_19925 IPR011344 Single-stranded DNA-binding protein MID00_19925 IPR000424 Primosome PriB/single-strand DNA-binding MID00_19925 IPR012340 Nucleic acid-binding, OB-fold MID00_19940 IPR007476 Putative exonuclease, RdgC MID00_19960 IPR008593 DNA N-6-adenine-methyltransferase MID00_19985 IPR036259 MFS transporter superfamily MID00_19985 IPR020846 Major facilitator superfamily domain MID00_19985 IPR011701 Major facilitator superfamily MID00_19990 IPR015358 Transcription regulator MerR, DNA binding MID00_19990 IPR010211 Redox-sensitive transcriptional activator SoxR MID00_19990 IPR000551 MerR-type HTH domain MID00_19990 IPR009061 Putative DNA-binding domain superfamily MID00_20030 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily MID00_20030 IPR006037 Regulator of K+ conductance, C-terminal MID00_20030 IPR031312 Sodium/sulphate symporter, conserved site MID00_20030 IPR004680 Citrate transporter-like domain MID00_20040 IPR011051 RmlC-like cupin domain superfamily MID00_20040 IPR014710 RmlC-like jelly roll fold MID00_20040 IPR018062 HTH domain AraC-type, conserved site MID00_20040 IPR018060 DNA binding HTH domain, AraC-type MID00_20040 IPR009057 Homeobox-like domain superfamily MID00_20040 IPR003313 AraC-type arabinose-binding/dimerisation domain MID00_20050 IPR001451 Hexapeptide repeat MID00_20050 IPR018357 Hexapeptide transferase, conserved site MID00_20050 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 MID00_20050 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily MID00_20050 IPR011004 Trimeric LpxA-like superfamily MID00_20050 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family MID00_20055 IPR036264 Bacterial exopeptidase dimerisation domain MID00_20055 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria MID00_20055 IPR002933 Peptidase M20 MID00_20055 IPR011650 Peptidase M20, dimerisation domain MID00_20060 IPR007848 Methyltransferase small domain MID00_20060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_20060 IPR004556 Methyltransferase HemK-like MID00_20060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site MID00_20060 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase MID00_20065 IPR003593 AAA+ ATPase domain MID00_20065 IPR032781 ABC-transporter extension domain MID00_20065 IPR003439 ABC transporter-like MID00_20065 IPR017871 ABC transporter, conserved site MID00_20065 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20090 IPR039562 Membrane fusion protein, biotin-lipoyl like domain MID00_20095 IPR003012 Tetracycline transcriptional regulator, TetR MID00_20095 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MID00_20095 IPR009057 Homeobox-like domain superfamily MID00_20095 IPR001647 DNA-binding HTH domain, TetR-type MID00_20095 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily MID00_20095 IPR004111 Tetracycline repressor TetR, C-terminal MID00_20120 IPR014017 UvrD-like DNA helicase, C-terminal MID00_20120 IPR034739 UvrD/AddA helicase, N-terminal MID00_20120 IPR014016 UvrD-like helicase, ATP-binding domain MID00_20120 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20120 IPR000212 DNA helicase, UvrD/REP type MID00_20120 IPR013986 DExx box DNA helicase domain superfamily MID00_20120 IPR005753 DNA helicase, ATP-dependent, UvrD type MID00_20130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_20130 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site MID00_20130 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type MID00_20130 IPR035926 NusB-like superfamily MID00_20130 IPR006027 NusB/RsmB/TIM44 MID00_20130 IPR023267 RNA (C5-cytosine) methyltransferase MID00_20130 IPR004573 rRNA small subunit methyltransferase B MID00_20135 IPR036477 Formyl transferase, N-terminal domain superfamily MID00_20135 IPR004607 Phosphoribosylglycinamide formyltransferase MID00_20135 IPR001555 Phosphoribosylglycinamide formyltransferase, active site MID00_20135 IPR002376 Formyl transferase, N-terminal MID00_20140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_20140 IPR023465 Riboflavin kinase domain superfamily MID00_20140 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic MID00_20140 IPR002606 Riboflavin kinase, bacterial MID00_20140 IPR023468 Riboflavin kinase MID00_20140 IPR015864 FAD synthetase MID00_20145 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain MID00_20145 IPR010663 Zinc finger, FPG/IleRS-type MID00_20145 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain MID00_20145 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding MID00_20145 IPR002300 Aminoacyl-tRNA synthetase, class Ia MID00_20145 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding MID00_20145 IPR023585 Isoleucine-tRNA ligase, type 1 MID00_20145 IPR002301 Isoleucine-tRNA ligase MID00_20145 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site MID00_20145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_20150 IPR001872 Peptidase A8, signal peptidase II MID00_20155 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal MID00_20155 IPR036551 Flavin prenyltransferase-like MID00_20155 IPR035929 CoaB-like superfamily MID00_20155 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC MID00_20155 IPR003382 Flavoprotein MID00_20160 IPR029054 dUTPase-like MID00_20160 IPR036157 dUTPase-like superfamily MID00_20160 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase MID00_20160 IPR033704 dUTPase, trimeric MID00_20165 IPR010286 METTL16/RlmF family MID00_20165 IPR016909 Ribosomal RNA large subunit methyltransferase F MID00_20165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MID00_20185 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20185 IPR003439 ABC transporter-like MID00_20185 IPR003593 AAA+ ATPase domain MID00_20185 IPR017871 ABC transporter, conserved site MID00_20185 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein MID00_20190 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20190 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MID00_20190 IPR003439 ABC transporter-like MID00_20190 IPR003593 AAA+ ATPase domain MID00_20190 IPR017871 ABC transporter, conserved site MID00_20195 IPR001851 ABC transporter, permease MID00_20195 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal MID00_20200 IPR001851 ABC transporter, permease MID00_20205 IPR028082 Periplasmic binding protein-like I MID00_20205 IPR000709 Leu/Ile/Val-binding protein MID00_20205 IPR028081 Leucine-binding protein domain MID00_20210 IPR013321 Arc-type ribbon-helix-helix MID00_20210 IPR002872 Proline dehydrogenase domain MID00_20210 IPR024082 Proline dehydrogenase PutA, domain II MID00_20210 IPR024089 Proline dehydrogenase PutA, domain I/II MID00_20210 IPR010985 Ribbon-helix-helix MID00_20210 IPR024090 Proline dehydrogenase PutA, domain I MID00_20210 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain MID00_20210 IPR029041 FAD-linked oxidoreductase-like MID00_20210 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 MID00_20210 IPR016163 Aldehyde dehydrogenase, C-terminal MID00_20210 IPR016160 Aldehyde dehydrogenase, cysteine active site MID00_20210 IPR029510 Aldehyde dehydrogenase, glutamic acid active site MID00_20210 IPR016162 Aldehyde dehydrogenase, N-terminal MID00_20210 IPR015590 Aldehyde dehydrogenase domain MID00_20210 IPR025703 Bifunctional protein PutA MID00_20210 IPR016161 Aldehyde/histidinol dehydrogenase MID00_20220 IPR003399 Mce/MlaD MID00_20225 IPR007498 Intermembrane transport protein PqiA-like MID00_20225 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type MID00_20230 IPR003593 AAA+ ATPase domain MID00_20230 IPR003959 ATPase, AAA-type, core MID00_20230 IPR019489 Clp ATPase, C-terminal MID00_20230 IPR036628 Clp, N-terminal domain superfamily MID00_20230 IPR004176 Clp, N-terminal MID00_20230 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA MID00_20230 IPR001270 ClpA/B family MID00_20230 IPR018368 ClpA/B, conserved site 1 MID00_20230 IPR028299 ClpA/B, conserved site 2 MID00_20230 IPR041546 ClpA/ClpB, AAA lid domain MID00_20230 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20235 IPR022935 ATP-dependent Clp protease adaptor protein ClpS MID00_20235 IPR003769 Adaptor protein ClpS, core MID00_20235 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MID00_20240 IPR012156 Cold shock, CspA MID00_20240 IPR011129 Cold shock domain MID00_20240 IPR012340 Nucleic acid-binding, OB-fold MID00_20240 IPR019844 Cold-shock (CSD) domain MID00_20240 IPR002059 Cold-shock protein, DNA-binding MID00_20250 IPR020616 Thiolase, N-terminal MID00_20250 IPR020613 Thiolase, conserved site MID00_20250 IPR020617 Thiolase, C-terminal MID00_20250 IPR020610 Thiolase, active site MID00_20250 IPR020615 Thiolase, acyl-enzyme intermediate active site MID00_20250 IPR016039 Thiolase-like MID00_20250 IPR002155 Thiolase MID00_20250 IPR012793 Beta-ketoadipyl CoA thiolase MID00_20255 IPR001011 Acid phosphatase, class A, bacterial MID00_20255 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MID00_20255 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily MID00_20255 IPR018296 Acid phosphatase, class A, bacterial, conserved site MID00_20260 IPR012347 Ferritin-like MID00_20260 IPR002024 Bacterioferritin MID00_20260 IPR008331 Ferritin/DPS protein domain MID00_20260 IPR009040 Ferritin-like diiron domain MID00_20260 IPR009078 Ferritin-like superfamily MID00_20265 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MID00_20265 IPR019831 Manganese/iron superoxide dismutase, N-terminal MID00_20265 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MID00_20265 IPR019832 Manganese/iron superoxide dismutase, C-terminal MID00_20265 IPR019833 Manganese/iron superoxide dismutase, binding site MID00_20265 IPR001189 Manganese/iron superoxide dismutase MID00_20270 IPR003753 Exonuclease VII, large subunit MID00_20270 IPR020579 Exonuclease VII, large subunit, C-terminal MID00_20270 IPR025824 OB-fold nucleic acid binding domain MID00_20275 IPR002898 MotA/TolQ/ExbB proton channel MID00_20280 IPR003400 Biopolymer transport protein ExbD/TolR MID00_20285 IPR003758 Tetraacyldisaccharide 4'-kinase MID00_20285 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20290 IPR005651 Trm112-like MID00_20295 IPR003329 Acylneuraminate cytidylyltransferase MID00_20295 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase MID00_20295 IPR029044 Nucleotide-diphospho-sugar transferases MID00_20300 IPR006259 Adenylate kinase subfamily MID00_20300 IPR000850 Adenylate kinase/UMP-CMP kinase MID00_20300 IPR007862 Adenylate kinase, active site lid domain MID00_20300 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20300 IPR033690 Adenylate kinase, conserved site MID00_20305 IPR036291 NAD(P)-binding domain superfamily MID00_20305 IPR020904 Short-chain dehydrogenase/reductase, conserved site MID00_20305 IPR002347 Short-chain dehydrogenase/reductase SDR MID00_20310 IPR004268 Peptidoglycan biosynthesis protein MurJ MID00_20315 IPR002583 Ribosomal protein S20 MID00_20315 IPR036510 Ribosomal protein S20 superfamily MID00_20320 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MID00_20320 IPR036291 NAD(P)-binding domain superfamily MID00_20320 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain MID00_20330 IPR002292 Ornithine/putrescine carbamoyltransferase MID00_20330 IPR024904 Ornithine carbamoyltransferase MID00_20330 IPR006130 Aspartate/ornithine carbamoyltransferase MID00_20330 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding MID00_20330 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily MID00_20330 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain MID00_20335 IPR001867 OmpR/PhoB-type DNA-binding domain MID00_20335 IPR001789 Signal transduction response regulator, receiver domain MID00_20335 IPR039420 Transcriptional regulatory protein WalR-like MID00_20335 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_20335 IPR011006 CheY-like superfamily MID00_20340 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal MID00_20340 IPR025201 Sensor protein KdpD, transmembrane domain MID00_20340 IPR038318 KdpD, transmembrane domain superfamily MID00_20340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily MID00_20340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain MID00_20340 IPR005467 Histidine kinase domain MID00_20340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily MID00_20340 IPR003594 Histidine kinase/HSP90-like ATPase MID00_20340 IPR029016 GAF-like domain superfamily MID00_20340 IPR003018 GAF domain MID00_20340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal MID00_20345 IPR023299 P-type ATPase, cytoplasmic domain N MID00_20345 IPR018303 P-type ATPase, phosphorylation site MID00_20345 IPR023298 P-type ATPase, transmembrane domain superfamily MID00_20345 IPR036412 HAD-like superfamily MID00_20345 IPR006391 P-type ATPase, B chain, subfamily IA MID00_20345 IPR001757 P-type ATPase MID00_20345 IPR023214 HAD superfamily MID00_20345 IPR008250 P-type ATPase, A domain superfamily MID00_20350 IPR003820 Potassium-transporting ATPase C chain MID00_20355 IPR004623 Potassium-transporting ATPase A chain MID00_20365 IPR029062 Class I glutamine amidotransferase-like MID00_20365 IPR017926 Glutamine amidotransferase MID00_20365 IPR001674 GMP synthase, C-terminal MID00_20365 IPR004739 GMP synthase, glutamine amidotransferase MID00_20365 IPR025777 GMP synthetase ATP pyrophosphatase domain MID00_20365 IPR022310 NAD/GMP synthase MID00_20365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_20365 IPR022955 GMP synthase MID00_20370 IPR000843 LacI-type HTH domain MID00_20370 IPR028082 Periplasmic binding protein-like I MID00_20370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily MID00_20370 IPR006377 Catabolite control protein A MID00_20375 IPR006059 Bacterial extracellular solute-binding protein MID00_20375 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter MID00_20385 IPR006469 NifC-like ABC-type porter MID00_20385 IPR011867 Molybdate ABC transporter, permease protein MID00_20385 IPR035906 MetI-like superfamily MID00_20385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like MID00_20390 IPR008995 Molybdate/tungstate binding, C-terminal MID00_20390 IPR017871 ABC transporter, conserved site MID00_20390 IPR003439 ABC transporter-like MID00_20390 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal MID00_20390 IPR005666 Sulphate transport system permease protein 1 MID00_20390 IPR013611 Transport-associated OB, type 2 MID00_20390 IPR027417 P-loop containing nucleoside triphosphate hydrolase MID00_20390 IPR003593 AAA+ ATPase domain MID00_20395 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA MID00_20395 IPR042281 GpdQ, beta-strand dimerisation domain MID00_20395 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type MID00_20395 IPR042283 GpdQ, catalytic alpha/beta sandwich domain MID00_20400 IPR023437 Argininosuccinate synthase, type 2 subfamily MID00_20400 IPR001518 Argininosuccinate synthase MID00_20400 IPR018223 Argininosuccinate synthase, conserved site MID00_20400 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body MID00_20400 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail MID00_20400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MID00_20410 IPR007401 Protein of unknown function DUF454 MID00_20415 IPR003561 Mutator MutT MID00_20415 IPR015797 NUDIX hydrolase-like domain superfamily MID00_20415 IPR020084 NUDIX hydrolase, conserved site MID00_20415 IPR000086 NUDIX hydrolase domain MID00_20415 IPR020476 NUDIX hydrolase MID00_20425 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme MID00_20425 IPR006233 Cystathionine beta-lyase, bacterial MID00_20425 IPR015424 Pyridoxal phosphate-dependent transferase MID00_20425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain MID00_20425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 MID00_20430 IPR036388 Winged helix-like DNA-binding domain superfamily MID00_20430 IPR019885 Transcription regulator HTH, AsnC-type, conserved site MID00_20430 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain MID00_20430 IPR036390 Winged helix DNA-binding domain superfamily MID00_20430 IPR011008 Dimeric alpha-beta barrel MID00_20430 IPR000485 AsnC-type HTH domain MID00_20430 IPR011991 ArsR-like helix-turn-helix domain MID00_20430 IPR019888 Transcription regulator AsnC-type MID00_20445 IPR000160 GGDEF domain MID00_20445 IPR029787 Nucleotide cyclase MID00_20495 IPR034690 Endolysin T4 type MID00_20495 IPR002196 Glycoside hydrolase, family 24 MID00_20495 IPR023346 Lysozyme-like domain superfamily MID00_20505 IPR010998 Integrase/recombinase, N-terminal MID00_20505 IPR011010 DNA breaking-rejoining enzyme, catalytic core MID00_20505 IPR013762 Integrase-like, catalytic domain superfamily MID00_20505 IPR002104 Integrase, catalytic domain