locus-tag class description JYG33_00010 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_00020 PF02803 Thiolase, C-terminal domain JYG33_00020 PF00108 Thiolase, N-terminal domain JYG33_00025 PF00501 AMP-binding enzyme JYG33_00025 PF13193 AMP-binding enzyme C-terminal domain JYG33_00040 PF01132 Elongation factor P (EF-P) OB domain JYG33_00040 PF08207 Elongation factor P (EF-P) KOW-like domain JYG33_00040 PF09285 Elongation factor P, C-terminal JYG33_00055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_00055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_00065 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_00070 PF00330 Aconitase family (aconitate hydratase) JYG33_00070 PF06434 Aconitate hydratase 2 N-terminus JYG33_00070 PF11791 Aconitate B N-terminal domain JYG33_00085 PF00285 Citrate synthase, C-terminal domain JYG33_00095 PF02954 Bacterial regulatory protein, Fis family JYG33_00095 PF06506 Propionate catabolism activator JYG33_00095 PF00158 Sigma-54 interaction domain JYG33_00100 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JYG33_00100 PF00056 lactate/malate dehydrogenase, NAD binding domain JYG33_00105 PF00392 Bacterial regulatory proteins, gntR family JYG33_00105 PF07702 UTRA domain JYG33_00110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JYG33_00120 PF00890 FAD binding domain JYG33_00120 PF02910 Fumarate reductase flavoprotein C-term JYG33_00125 PF13085 2Fe-2S iron-sulfur cluster binding domain JYG33_00130 PF03937 Flavinator of succinate dehydrogenase JYG33_00135 PF00285 Citrate synthase, C-terminal domain JYG33_00150 PF12833 Helix-turn-helix domain JYG33_00155 PF01515 Phosphate acetyl/butaryl transferase JYG33_00155 PF00390 Malic enzyme, N-terminal domain JYG33_00155 PF03949 Malic enzyme, NAD binding domain JYG33_00160 PF02779 Transketolase, pyrimidine binding domain JYG33_00160 PF00676 Dehydrogenase E1 component JYG33_00160 PF16870 2-oxoglutarate dehydrogenase C-terminal JYG33_00160 PF16078 2-oxoglutarate dehydrogenase N-terminus JYG33_00165 PF02817 e3 binding domain JYG33_00165 PF00364 Biotin-requiring enzyme JYG33_00165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYG33_00170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYG33_00170 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_00175 PF03969 AFG1-like ATPase JYG33_00180 PF00579 tRNA synthetases class I (W and Y) JYG33_00185 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_00195 PF09371 Tex-like protein N-terminal domain JYG33_00195 PF17674 HHH domain JYG33_00195 PF16921 Tex protein YqgF-like domain JYG33_00195 PF00575 S1 RNA binding domain JYG33_00200 PF13307 Helicase C-terminal domain JYG33_00200 PF04851 Type III restriction enzyme, res subunit JYG33_00210 PF01638 HxlR-like helix-turn-helix JYG33_00220 PF06249 Ethanolamine utilisation protein EutQ JYG33_00230 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_00240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_00245 PF00440 Bacterial regulatory proteins, tetR family JYG33_00245 PF08361 MAATS-type transcriptional repressor, C-terminal region JYG33_00250 PF13525 Outer membrane lipoprotein JYG33_00255 PF00849 RNA pseudouridylate synthase JYG33_00255 PF01479 S4 domain JYG33_00260 PF02578 Multi-copper polyphenol oxidoreductase laccase JYG33_00265 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JYG33_00270 PF00106 short chain dehydrogenase JYG33_00275 PF05233 PHB accumulation regulatory domain JYG33_00275 PF07879 PHB/PHA accumulation regulator DNA-binding domain JYG33_00300 PF04079 Segregation and condensation complex subunit ScpB JYG33_00305 PF01479 S4 domain JYG33_00305 PF00849 RNA pseudouridylate synthase JYG33_00310 PF02576 RimP N-terminal domain JYG33_00310 PF17384 RimP C-terminal SH3 domain JYG33_00315 PF13184 NusA-like KH domain JYG33_00315 PF08529 NusA N-terminal domain JYG33_00320 PF00009 Elongation factor Tu GTP binding domain JYG33_00320 PF11987 Translation-initiation factor 2 JYG33_00320 PF04760 Translation initiation factor IF-2, N-terminal region JYG33_00320 PF08364 Bacterial translation initiation factor IF-2 associated region JYG33_00325 PF02033 Ribosome-binding factor A JYG33_00330 PF01509 TruB family pseudouridylate synthase (N terminal domain) JYG33_00330 PF16198 tRNA pseudouridylate synthase B C-terminal domain JYG33_00335 PF00679 Elongation factor G C-terminus JYG33_00335 PF00009 Elongation factor Tu GTP binding domain JYG33_00335 PF03144 Elongation factor Tu domain 2 JYG33_00340 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_00350 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_00355 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_00360 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_00365 PF03641 Possible lysine decarboxylase JYG33_00370 PF01367 5'-3' exonuclease, C-terminal SAM fold JYG33_00370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYG33_00370 PF00476 DNA polymerase family A JYG33_00370 PF01612 3'-5' exonuclease JYG33_00375 PF02690 Na+/Pi-cotransporter JYG33_00390 PF00583 Acetyltransferase (GNAT) family JYG33_00400 PF01435 Peptidase family M48 JYG33_00410 PF00581 Rhodanese-like domain JYG33_00415 PF02609 Exonuclease VII small subunit JYG33_00420 PF00348 Polyprenyl synthetase JYG33_00425 PF02780 Transketolase, C-terminal domain JYG33_00425 PF02779 Transketolase, pyrimidine binding domain JYG33_00425 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JYG33_00430 PF02649 Type I GTP cyclohydrolase folE2 JYG33_00435 PF01250 Ribosomal protein S6 JYG33_00445 PF01084 Ribosomal protein S18 JYG33_00450 PF01281 Ribosomal protein L9, N-terminal domain JYG33_00450 PF03948 Ribosomal protein L9, C-terminal domain JYG33_00455 PF03796 DnaB-like helicase C terminal domain JYG33_00455 PF00772 DnaB-like helicase N terminal domain JYG33_00460 PF13593 SBF-like CPA transporter family (DUF4137) JYG33_00465 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JYG33_00470 PF13638 PIN domain JYG33_00470 PF02562 PhoH-like protein JYG33_00475 PF00578 AhpC/TSA family JYG33_00480 PF04430 Protein of unknown function (DUF498/DUF598) JYG33_00485 PF00155 Aminotransferase class I and II JYG33_00490 PF01842 ACT domain JYG33_00490 PF00742 Homoserine dehydrogenase JYG33_00490 PF03447 Homoserine dehydrogenase, NAD binding domain JYG33_00495 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_00495 PF14821 Threonine synthase N terminus JYG33_00500 PF13302 Acetyltransferase (GNAT) domain JYG33_00505 PF01593 Flavin containing amine oxidoreductase JYG33_00520 PF01168 Alanine racemase, N-terminal domain JYG33_00520 PF00842 Alanine racemase, C-terminal domain JYG33_00530 PF18073 Rubredoxin metal binding domain JYG33_00545 PF13416 Bacterial extracellular solute-binding protein JYG33_00550 PF08402 TOBE domain JYG33_00550 PF00005 ABC transporter JYG33_00555 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_00560 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_00570 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JYG33_00575 PF01895 PhoU domain JYG33_00580 PF00360 Phytochrome region JYG33_00580 PF00990 Diguanylate cyclase, GGDEF domain JYG33_00580 PF01590 GAF domain JYG33_00580 PF00563 EAL domain JYG33_00585 PF04362 Bacterial Fe(2+) trafficking JYG33_00590 PF00696 Amino acid kinase family JYG33_00590 PF00583 Acetyltransferase (GNAT) family JYG33_00595 PF00271 Helicase conserved C-terminal domain JYG33_00595 PF04408 Helicase associated domain (HA2) JYG33_00595 PF11898 Domain of unknown function (DUF3418) JYG33_00595 PF00270 DEAD/DEAH box helicase JYG33_00595 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JYG33_00600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYG33_00600 PF14579 Helix-hairpin-helix motif JYG33_00600 PF02811 PHP domain JYG33_00600 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYG33_00600 PF01336 OB-fold nucleic acid binding domain JYG33_00605 PF13439 Glycosyltransferase Family 4 JYG33_00605 PF00534 Glycosyl transferases group 1 JYG33_00610 PF01522 Polysaccharide deacetylase JYG33_00615 PF00535 Glycosyl transferase family 2 JYG33_00625 PF13439 Glycosyltransferase Family 4 JYG33_00625 PF00534 Glycosyl transferases group 1 JYG33_00635 PF03692 Putative zinc- or iron-chelating domain JYG33_00650 PF00664 ABC transporter transmembrane region JYG33_00650 PF00005 ABC transporter JYG33_00665 PF10150 Ribonuclease E/G family JYG33_00665 PF00575 S1 RNA binding domain JYG33_00705 PF07729 FCD domain JYG33_00705 PF00392 Bacterial regulatory proteins, gntR family JYG33_00710 PF02913 FAD linked oxidases, C-terminal domain JYG33_00710 PF01565 FAD binding domain JYG33_00715 PF01565 FAD binding domain JYG33_00720 PF02754 Cysteine-rich domain JYG33_00720 PF13183 4Fe-4S dicluster domain JYG33_00730 PF03006 Haemolysin-III related JYG33_00750 PF01594 AI-2E family transporter JYG33_00755 PF02690 Na+/Pi-cotransporter JYG33_00770 PF13609 Gram-negative porin JYG33_00780 PF00892 EamA-like transporter family JYG33_00790 PF03466 LysR substrate binding domain JYG33_00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_00795 PF03601 Conserved hypothetical protein 698 JYG33_00800 PF04247 Invasion gene expression up-regulator, SirB JYG33_00805 PF00753 Metallo-beta-lactamase superfamily JYG33_00815 PF04143 Sulphur transport JYG33_00825 PF13411 MerR HTH family regulatory protein JYG33_00830 PF00403 Heavy-metal-associated domain JYG33_00835 PF01740 STAS domain JYG33_00835 PF00916 Sulfate permease family JYG33_00840 PF03781 Sulfatase-modifying factor enzyme 1 JYG33_00845 PF00884 Sulfatase JYG33_00850 PF05154 TM2 domain JYG33_00855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYG33_00855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYG33_00860 PF01266 FAD dependent oxidoreductase JYG33_00860 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JYG33_00865 PF00877 NlpC/P60 family JYG33_00870 PF05247 Flagellar transcriptional activator (FlhD) JYG33_00875 PF05280 Flagellar transcriptional activator (FlhC) JYG33_00880 PF01618 MotA/TolQ/ExbB proton channel family JYG33_00885 PF13677 Membrane MotB of proton-channel complex MotA/MotB JYG33_00885 PF00691 OmpA family JYG33_00890 PF01584 CheW-like domain JYG33_00890 PF02895 Signal transducing histidine kinase, homodimeric domain JYG33_00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_00890 PF01627 Hpt domain JYG33_00890 PF09078 CheY binding JYG33_00895 PF01584 CheW-like domain JYG33_00900 PF00672 HAMP domain JYG33_00900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_00900 PF02203 Tar ligand binding domain homologue JYG33_00905 PF03705 CheR methyltransferase, all-alpha domain JYG33_00905 PF01739 CheR methyltransferase, SAM binding domain JYG33_00910 PF01339 CheB methylesterase JYG33_00910 PF00072 Response regulator receiver domain JYG33_00915 PF00072 Response regulator receiver domain JYG33_00920 PF04344 Chemotaxis phosphatase, CheZ JYG33_00925 PF01312 FlhB HrpN YscU SpaS Family JYG33_00930 PF00771 FHIPEP family JYG33_00935 PF00448 SRP54-type protein, GTPase domain JYG33_00945 PF04316 Anti-sigma-28 factor, FlgM JYG33_00955 PF00460 Flagella basal body rod protein JYG33_00960 PF00460 Flagella basal body rod protein JYG33_00960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYG33_00965 PF03963 Flagellar hook capping protein - N-terminal region JYG33_00965 PF13860 FlgD Ig-like domain JYG33_00965 PF13861 FlgD Tudor-like domain JYG33_00970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYG33_00970 PF00460 Flagella basal body rod protein JYG33_00970 PF07559 Flagellar basal body protein FlaE JYG33_00975 PF00460 Flagella basal body rod protein JYG33_00975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYG33_00980 PF00460 Flagella basal body rod protein JYG33_00980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYG33_00985 PF02107 Flagellar L-ring protein JYG33_00990 PF02119 Flagellar P-ring protein JYG33_00995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYG33_00995 PF10135 Rod binding protein JYG33_01000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYG33_01000 PF00460 Flagella basal body rod protein JYG33_01005 PF08884 Flagellin D3 domain JYG33_01005 PF00700 Bacterial flagellin C-terminal helical region JYG33_01005 PF00669 Bacterial flagellin N-terminal helical region JYG33_01010 PF00672 HAMP domain JYG33_01010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_01010 PF02203 Tar ligand binding domain homologue JYG33_01020 PF00672 HAMP domain JYG33_01020 PF02203 Tar ligand binding domain homologue JYG33_01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_01030 PF02811 PHP domain JYG33_01030 PF14579 Helix-hairpin-helix motif JYG33_01030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYG33_01030 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYG33_01030 PF00929 Exonuclease JYG33_01035 PF01311 Bacterial export proteins, family 1 JYG33_01040 PF01313 Bacterial export proteins, family 3 JYG33_01045 PF00813 FliP family JYG33_01050 PF04347 Flagellar biosynthesis protein, FliO JYG33_01055 PF16973 Flagellar motor switch protein FliN N-terminal JYG33_01055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JYG33_01060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JYG33_01060 PF02154 Flagellar motor switch protein FliM JYG33_01065 PF03748 Flagellar basal body-associated protein FliL JYG33_01080 PF18269 T3SS EscN ATPase C-terminal domain JYG33_01080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYG33_01090 PF14841 FliG middle domain JYG33_01090 PF01706 FliG C-terminal domain JYG33_01090 PF14842 FliG N-terminal domain JYG33_01095 PF01514 Secretory protein of YscJ/FliF family JYG33_01095 PF08345 Flagellar M-ring protein C-terminal JYG33_01100 PF02049 Flagellar hook-basal body complex protein FliE JYG33_01105 PF01312 FlhB HrpN YscU SpaS Family JYG33_01120 PF02561 Flagellar protein FliS JYG33_01125 PF07195 Flagellar hook-associated protein 2 C-terminus JYG33_01125 PF02465 Flagellar hook-associated protein 2 N-terminus JYG33_01125 PF07196 Flagellin hook IN motif JYG33_01130 PF03646 FlaG protein JYG33_01135 PF04542 Sigma-70 region 2 JYG33_01135 PF04539 Sigma-70 region 3 JYG33_01135 PF04545 Sigma-70, region 4 JYG33_01145 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JYG33_01155 PF00700 Bacterial flagellin C-terminal helical region JYG33_01155 PF08884 Flagellin D3 domain JYG33_01155 PF00669 Bacterial flagellin N-terminal helical region JYG33_01190 PF00005 ABC transporter JYG33_01200 PF03781 Sulfatase-modifying factor enzyme 1 JYG33_01220 PF04286 Protein of unknown function (DUF445) JYG33_01225 PF08447 PAS fold JYG33_01225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_01230 PF08447 PAS fold JYG33_01230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_01240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JYG33_01240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JYG33_01245 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_01265 PF13614 AAA domain JYG33_01285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYG33_01290 PF00005 ABC transporter JYG33_01295 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_01305 PF03466 LysR substrate binding domain JYG33_01305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_01310 PF00990 Diguanylate cyclase, GGDEF domain JYG33_01310 PF17158 Membrane-associated sensor, integral membrane domain JYG33_01315 PF08274 PhnA Zinc-Ribbon JYG33_01315 PF03831 PhnA domain JYG33_01335 PF07715 TonB-dependent Receptor Plug Domain JYG33_01340 PF03150 Di-haem cytochrome c peroxidase JYG33_01350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_01380 PF07715 TonB-dependent Receptor Plug Domain JYG33_01380 PF07660 Secretin and TonB N terminus short domain JYG33_01380 PF00593 TonB dependent receptor JYG33_01385 PF00324 Amino acid permease JYG33_01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_01405 PF03466 LysR substrate binding domain JYG33_01410 PF07007 Lysozyme inhibitor LprI JYG33_01415 PF00230 Major intrinsic protein JYG33_01455 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_01455 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding JYG33_01455 PF10518 TAT (twin-arginine translocation) pathway signal sequence JYG33_01480 PF00313 'Cold-shock' DNA-binding domain JYG33_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_01485 PF08521 Two-component sensor kinase N-terminal JYG33_01485 PF00512 His Kinase A (phospho-acceptor) domain JYG33_01490 PF00486 Transcriptional regulatory protein, C terminal JYG33_01490 PF00072 Response regulator receiver domain JYG33_01495 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYG33_01505 PF00034 Cytochrome c JYG33_01510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_01515 PF00149 Calcineurin-like phosphoesterase JYG33_01520 PF07715 TonB-dependent Receptor Plug Domain JYG33_01520 PF00593 TonB dependent receptor JYG33_01550 PF01914 MarC family integral membrane protein JYG33_01565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYG33_01565 PF00529 HlyD membrane-fusion protein of T1SS JYG33_01570 PF12805 FUSC-like inner membrane protein yccS JYG33_01575 PF00860 Permease family JYG33_01595 PF02630 SCO1/SenC JYG33_01605 PF01645 Conserved region in glutamate synthase JYG33_01615 PF12802 MarR family JYG33_01620 PF00330 Aconitase family (aconitate hydratase) JYG33_01620 PF00694 Aconitase C-terminal domain JYG33_01630 PF04303 PrpF protein JYG33_01645 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYG33_01645 PF00355 Rieske [2Fe-2S] domain JYG33_01650 PF00866 Ring hydroxylating beta subunit JYG33_01665 PF01593 Flavin containing amine oxidoreductase JYG33_01670 PF12794 Mechanosensitive ion channel inner membrane domain 1 JYG33_01670 PF00924 Mechanosensitive ion channel JYG33_01670 PF12795 Mechanosensitive ion channel porin domain JYG33_01675 PF00924 Mechanosensitive ion channel JYG33_01675 PF12795 Mechanosensitive ion channel porin domain JYG33_01675 PF12794 Mechanosensitive ion channel inner membrane domain 1 JYG33_01680 PF08946 Osmosensory transporter coiled coil JYG33_01680 PF00083 Sugar (and other) transporter JYG33_01695 PF01381 Helix-turn-helix JYG33_01700 PF00072 Response regulator receiver domain JYG33_01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_01705 PF00512 His Kinase A (phospho-acceptor) domain JYG33_01705 PF00072 Response regulator receiver domain JYG33_01705 PF01627 Hpt domain JYG33_01710 PF00571 CBS domain JYG33_01710 PF01769 Divalent cation transporter JYG33_01710 PF03448 MgtE intracellular N domain JYG33_01720 PF06965 Na+/H+ antiporter 1 JYG33_01725 PF02580 D-Tyr-tRNA(Tyr) deacylase JYG33_01730 PF00893 Small Multidrug Resistance protein JYG33_01740 PF00583 Acetyltransferase (GNAT) family JYG33_01750 PF01435 Peptidase family M48 JYG33_01770 PF01726 LexA DNA binding domain JYG33_01770 PF00717 Peptidase S24-like JYG33_01890 PF00959 Phage lysozyme JYG33_01945 PF00990 Diguanylate cyclase, GGDEF domain JYG33_01960 PF01037 Lrp/AsnC ligand binding domain JYG33_01960 PF13404 AsnC-type helix-turn-helix domain JYG33_01965 PF01053 Cys/Met metabolism PLP-dependent enzyme JYG33_01975 PF00293 NUDIX domain JYG33_01980 PF04304 Protein of unknown function (DUF454) JYG33_01990 PF00764 Arginosuccinate synthase JYG33_01995 PF00958 GMP synthase C terminal domain JYG33_01995 PF00117 Glutamine amidotransferase class-I JYG33_01995 PF02540 NAD synthase JYG33_02005 PF03814 Potassium-transporting ATPase A subunit JYG33_02010 PF02669 K+-transporting ATPase, c chain JYG33_02020 PF13493 Domain of unknown function (DUF4118) JYG33_02020 PF13492 GAF domain JYG33_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_02020 PF00512 His Kinase A (phospho-acceptor) domain JYG33_02020 PF02702 Osmosensitive K+ channel His kinase sensor domain JYG33_02025 PF00072 Response regulator receiver domain JYG33_02025 PF00486 Transcriptional regulatory protein, C terminal JYG33_02030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYG33_02030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYG33_02040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYG33_02040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYG33_02045 PF01649 Ribosomal protein S20 JYG33_02050 PF03023 Lipid II flippase MurJ JYG33_02055 PF00106 short chain dehydrogenase JYG33_02060 PF05191 Adenylate kinase, active site lid JYG33_02065 PF02348 Cytidylyltransferase JYG33_02070 PF03966 Trm112p-like protein JYG33_02075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JYG33_02080 PF02472 Biopolymer transport protein ExbD/TolR JYG33_02085 PF01618 MotA/TolQ/ExbB proton channel family JYG33_02090 PF13742 OB-fold nucleic acid binding domain JYG33_02090 PF02601 Exonuclease VII, large subunit JYG33_02095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JYG33_02095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JYG33_02100 PF00210 Ferritin-like domain JYG33_02110 PF01569 PAP2 superfamily JYG33_02125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JYG33_02125 PF12833 Helix-turn-helix domain JYG33_02130 PF02803 Thiolase, C-terminal domain JYG33_02130 PF00108 Thiolase, N-terminal domain JYG33_02140 PF00313 'Cold-shock' DNA-binding domain JYG33_02145 PF02617 ATP-dependent Clp protease adaptor protein ClpS JYG33_02150 PF17871 AAA lid domain JYG33_02150 PF07724 AAA domain (Cdc48 subfamily) JYG33_02150 PF10431 C-terminal, D2-small domain, of ClpB protein JYG33_02150 PF02861 Clp amino terminal domain, pathogenicity island component JYG33_02150 PF00004 ATPase family associated with various cellular activities (AAA) JYG33_02155 PF04403 Paraquat-inducible protein A JYG33_02160 PF02470 MlaD protein JYG33_02170 PF00171 Aldehyde dehydrogenase family JYG33_02170 PF01619 Proline dehydrogenase JYG33_02170 PF14850 DNA-binding domain of Proline dehydrogenase JYG33_02170 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JYG33_02175 PF13458 Periplasmic binding protein JYG33_02180 PF02653 Branched-chain amino acid transport system / permease component JYG33_02185 PF02653 Branched-chain amino acid transport system / permease component JYG33_02185 PF11862 Domain of unknown function (DUF3382) JYG33_02190 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_02190 PF00005 ABC transporter JYG33_02195 PF00005 ABC transporter JYG33_02215 PF05971 RNA methyltransferase JYG33_02220 PF00692 dUTPase JYG33_02225 PF04127 DNA / pantothenate metabolism flavoprotein JYG33_02225 PF02441 Flavoprotein JYG33_02230 PF01252 Signal peptidase (SPase) II JYG33_02235 PF06827 Zinc finger found in FPG and IleRS JYG33_02235 PF00133 tRNA synthetases class I (I, L, M and V) JYG33_02235 PF08264 Anticodon-binding domain of tRNA JYG33_02240 PF01687 Riboflavin kinase JYG33_02240 PF06574 FAD synthetase JYG33_02245 PF00551 Formyl transferase JYG33_02250 PF01189 16S rRNA methyltransferase RsmB/F JYG33_02250 PF01029 NusB family JYG33_02260 PF00580 UvrD/REP helicase N-terminal domain JYG33_02260 PF13361 UvrD-like helicase C-terminal domain JYG33_02285 PF07690 Major Facilitator Superfamily JYG33_02295 PF12848 ABC transporter JYG33_02295 PF00005 ABC transporter JYG33_02300 PF05175 Methyltransferase small domain JYG33_02305 PF01546 Peptidase family M20/M25/M40 JYG33_02305 PF07687 Peptidase dimerisation domain JYG33_02310 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_02310 PF14602 Hexapeptide repeat of succinyl-transferase JYG33_02310 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JYG33_02320 PF02311 AraC-like ligand binding domain JYG33_02320 PF12833 Helix-turn-helix domain JYG33_02330 PF03600 Citrate transporter JYG33_02330 PF02080 TrkA-C domain JYG33_02370 PF00376 MerR family regulatory protein JYG33_02370 PF09278 MerR, DNA binding JYG33_02375 PF07690 Major Facilitator Superfamily JYG33_02380 PF00313 'Cold-shock' DNA-binding domain JYG33_02390 PF02515 CoA-transferase family III JYG33_02395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYG33_02395 PF05698 Bacterial trigger factor protein (TF) C-terminus JYG33_02395 PF05697 Bacterial trigger factor protein (TF) JYG33_02400 PF00574 Clp protease JYG33_02405 PF07724 AAA domain (Cdc48 subfamily) JYG33_02405 PF10431 C-terminal, D2-small domain, of ClpB protein JYG33_02405 PF06689 ClpX C4-type zinc finger JYG33_02410 PF02190 ATP-dependent protease La (LON) substrate-binding domain JYG33_02410 PF05362 Lon protease (S16) C-terminal proteolytic domain JYG33_02410 PF00004 ATPase family associated with various cellular activities (AAA) JYG33_02415 PF01726 LexA DNA binding domain JYG33_02415 PF00717 Peptidase S24-like JYG33_02420 PF13302 Acetyltransferase (GNAT) domain JYG33_02425 PF00155 Aminotransferase class I and II JYG33_02430 PF00271 Helicase conserved C-terminal domain JYG33_02430 PF04851 Type III restriction enzyme, res subunit JYG33_02430 PF02151 UvrB/uvrC motif JYG33_02430 PF12344 Ultra-violet resistance protein B JYG33_02430 PF17757 UvrB interaction domain JYG33_02435 PF01451 Low molecular weight phosphotyrosine protein phosphatase JYG33_02440 PF02082 Transcriptional regulator JYG33_02445 PF00266 Aminotransferase class-V JYG33_02450 PF01592 NifU-like N terminal domain JYG33_02455 PF01521 Iron-sulphur cluster biosynthesis JYG33_02460 PF02142 MGS-like domain JYG33_02465 PF00152 tRNA synthetases class II (D, K and N) JYG33_02465 PF01336 OB-fold nucleic acid binding domain JYG33_02470 PF00106 short chain dehydrogenase JYG33_02480 PF02203 Tar ligand binding domain homologue JYG33_02480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_02480 PF00672 HAMP domain JYG33_02485 PF01176 Translation initiation factor 1A / IF-1 JYG33_02490 PF00892 EamA-like transporter family JYG33_02495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_02495 PF08447 PAS fold JYG33_02495 PF13426 PAS domain JYG33_02500 PF01758 Sodium Bile acid symporter family JYG33_02510 PF01368 DHH family JYG33_02510 PF02272 DHHA1 domain JYG33_02510 PF17768 RecJ OB domain JYG33_02520 PF12704 MacB-like periplasmic core domain JYG33_02520 PF02687 FtsX-like permease family JYG33_02525 PF00005 ABC transporter JYG33_02530 PF01026 TatD related DNase JYG33_02535 PF03772 Competence protein JYG33_02535 PF00753 Metallo-beta-lactamase superfamily JYG33_02545 PF02811 PHP domain JYG33_02550 PF03449 Transcription elongation factor, N-terminal JYG33_02550 PF01272 Transcription elongation factor, GreA/GreB, C-term JYG33_02555 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JYG33_02555 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JYG33_02555 PF02769 AIR synthase related protein, C-terminal domain JYG33_02560 PF00571 CBS domain JYG33_02560 PF00478 IMP dehydrogenase / GMP reductase domain JYG33_02580 PF02540 NAD synthase JYG33_02580 PF00958 GMP synthase C terminal domain JYG33_02580 PF00117 Glutamine amidotransferase class-I JYG33_02585 PF03328 HpcH/HpaI aldolase/citrate lyase family JYG33_02590 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYG33_02595 PF01613 Flavin reductase like domain JYG33_02610 PF03466 LysR substrate binding domain JYG33_02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_02615 PF01717 Cobalamin-independent synthase, Catalytic domain JYG33_02615 PF08267 Cobalamin-independent synthase, N-terminal domain JYG33_02625 PF01717 Cobalamin-independent synthase, Catalytic domain JYG33_02645 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_02645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYG33_02645 PF18158 Adaptive response protein AidB N-terminal domain JYG33_02655 PF13280 WYL domain JYG33_02655 PF08279 HTH domain JYG33_02660 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYG33_02660 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYG33_02665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_02665 PF03466 LysR substrate binding domain JYG33_02670 PF07690 Major Facilitator Superfamily JYG33_02675 PF01965 DJ-1/PfpI family JYG33_02680 PF07969 Amidohydrolase family JYG33_02690 PF07690 Major Facilitator Superfamily JYG33_02695 PF01970 Tripartite tricarboxylate transporter TctA family JYG33_02705 PF13426 PAS domain JYG33_02705 PF08448 PAS fold JYG33_02705 PF00512 His Kinase A (phospho-acceptor) domain JYG33_02705 PF00072 Response regulator receiver domain JYG33_02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_02710 PF00072 Response regulator receiver domain JYG33_02710 PF00486 Transcriptional regulatory protein, C terminal JYG33_02735 PF07715 TonB-dependent Receptor Plug Domain JYG33_02735 PF00593 TonB dependent receptor JYG33_02750 PF08543 Phosphomethylpyrimidine kinase JYG33_02785 PF05425 Copper resistance protein D JYG33_02785 PF13115 YtkA-like JYG33_02785 PF04234 CopC domain JYG33_02800 PF02798 Glutathione S-transferase, N-terminal domain JYG33_02805 PF00574 Clp protease JYG33_02830 PF00891 O-methyltransferase domain JYG33_02840 PF00581 Rhodanese-like domain JYG33_02840 PF00899 ThiF family JYG33_02845 PF14464 Prokaryotic homologs of the JAB domain JYG33_02850 PF02597 ThiS family JYG33_02855 PF02515 CoA-transferase family III JYG33_02860 PF00501 AMP-binding enzyme JYG33_02860 PF13193 AMP-binding enzyme C-terminal domain JYG33_02890 PF01022 Bacterial regulatory protein, arsR family JYG33_02910 PF02311 AraC-like ligand binding domain JYG33_02910 PF12833 Helix-turn-helix domain JYG33_02915 PF08502 LeuA allosteric (dimerisation) domain JYG33_02915 PF00682 HMGL-like JYG33_02930 PF03466 LysR substrate binding domain JYG33_02930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_02935 PF13378 Enolase C-terminal domain-like JYG33_02935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYG33_02940 PF00775 Dioxygenase JYG33_02940 PF04444 Catechol dioxygenase N terminus JYG33_02945 PF01144 Coenzyme A transferase JYG33_02950 PF01144 Coenzyme A transferase JYG33_02955 PF12146 Serine aminopeptidase, S33 JYG33_02960 PF02426 Muconolactone delta-isomerase JYG33_02965 PF03594 Benzoate membrane transport protein JYG33_02970 PF01926 50S ribosome-binding GTPase JYG33_02975 PF01926 50S ribosome-binding GTPase JYG33_02980 PF02535 ZIP Zinc transporter JYG33_02985 PF00005 ABC transporter JYG33_02990 PF00850 Histone deacetylase domain JYG33_02995 PF00196 Bacterial regulatory proteins, luxR family JYG33_02995 PF00072 Response regulator receiver domain JYG33_03000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JYG33_03000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JYG33_03025 PF12802 MarR family JYG33_03030 PF01494 FAD binding domain JYG33_03035 PF07690 Major Facilitator Superfamily JYG33_03045 PF01168 Alanine racemase, N-terminal domain JYG33_03050 PF00392 Bacterial regulatory proteins, gntR family JYG33_03050 PF00155 Aminotransferase class I and II JYG33_03055 PF00892 EamA-like transporter family JYG33_03065 PF08774 VRR-NUC domain JYG33_03065 PF18081 Fanconi anemia-associated nuclease SAP domain JYG33_03075 PF08402 TOBE domain JYG33_03075 PF00005 ABC transporter JYG33_03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_03090 PF00512 His Kinase A (phospho-acceptor) domain JYG33_03095 PF00486 Transcriptional regulatory protein, C terminal JYG33_03095 PF00072 Response regulator receiver domain JYG33_03100 PF00890 FAD binding domain JYG33_03100 PF02910 Fumarate reductase flavoprotein C-term JYG33_03105 PF02445 Quinolinate synthetase A protein JYG33_03110 PF00248 Aldo/keto reductase family JYG33_03115 PF07969 Amidohydrolase family JYG33_03130 PF13356 Arm DNA-binding domain JYG33_03130 PF00589 Phage integrase family JYG33_03150 PF00145 C-5 cytosine-specific DNA methylase JYG33_03155 PF04381 Putative exonuclease, RdgC JYG33_03165 PF00436 Single-strand binding protein family JYG33_03190 PF00313 'Cold-shock' DNA-binding domain JYG33_03285 PF03592 Terminase small subunit JYG33_03285 PF10668 Phage terminase small subunit JYG33_03425 PF02586 SOS response associated peptidase (SRAP) JYG33_03455 PF07411 Domain of unknown function (DUF1508) JYG33_03480 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_03485 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_03490 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_03495 PF00005 ABC transporter JYG33_03515 PF02954 Bacterial regulatory protein, Fis family JYG33_03515 PF00158 Sigma-54 interaction domain JYG33_03515 PF02830 V4R domain JYG33_03515 PF06505 Activator of aromatic catabolism JYG33_03520 PF06099 Phenol hydroxylase subunit JYG33_03525 PF02332 Methane/Phenol/Toluene Hydroxylase JYG33_03530 PF02406 MmoB/DmpM family JYG33_03535 PF04945 YHS domain JYG33_03535 PF02332 Methane/Phenol/Toluene Hydroxylase JYG33_03540 PF04663 Phenol hydroxylase conserved region JYG33_03545 PF00970 Oxidoreductase FAD-binding domain JYG33_03545 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_03545 PF00175 Oxidoreductase NAD-binding domain JYG33_03550 PF03466 LysR substrate binding domain JYG33_03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_03555 PF00355 Rieske [2Fe-2S] domain JYG33_03555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYG33_03560 PF00866 Ring hydroxylating beta subunit JYG33_03565 PF00970 Oxidoreductase FAD-binding domain JYG33_03565 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_03565 PF00175 Oxidoreductase NAD-binding domain JYG33_03570 PF00106 short chain dehydrogenase JYG33_03575 PF07690 Major Facilitator Superfamily JYG33_03580 PF01810 LysE type translocator JYG33_03595 PF00356 Bacterial regulatory proteins, lacI family JYG33_03605 PF01979 Amidohydrolase family JYG33_03610 PF00860 Permease family JYG33_03630 PF01145 SPFH domain / Band 7 family JYG33_03630 PF16200 C-terminal region of band_7 JYG33_03635 PF01957 NfeD-like C-terminal, partner-binding JYG33_03640 PF13649 Methyltransferase domain JYG33_03650 PF03891 Domain of unknown function (DUF333) JYG33_03660 PF00294 pfkB family carbohydrate kinase JYG33_03675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYG33_03675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYG33_03675 PF02824 TGS domain JYG33_03675 PF03129 Anticodon binding domain JYG33_03680 PF05198 Translation initiation factor IF-3, N-terminal domain JYG33_03680 PF00707 Translation initiation factor IF-3, C-terminal domain JYG33_03685 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JYG33_03685 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JYG33_03695 PF00381 PTS HPr component phosphorylation site JYG33_03700 PF00391 PEP-utilising enzyme, mobile domain JYG33_03700 PF02896 PEP-utilising enzyme, TIM barrel domain JYG33_03700 PF05524 PEP-utilising enzyme, N-terminal JYG33_03725 PF01078 Magnesium chelatase, subunit ChlI JYG33_03725 PF13335 Magnesium chelatase, subunit ChlI C-terminal JYG33_03740 PF01632 Ribosomal protein L35 JYG33_03745 PF00453 Ribosomal protein L20 JYG33_03750 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JYG33_03750 PF01409 tRNA synthetases class II core domain (F) JYG33_03755 PF03147 Ferredoxin-fold anticodon binding domain JYG33_03755 PF03484 tRNA synthetase B5 domain JYG33_03755 PF03483 B3/4 domain JYG33_03755 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JYG33_03755 PF01588 Putative tRNA binding domain JYG33_03760 PF00216 Bacterial DNA-binding protein JYG33_03770 PF04305 Protein of unknown function (DUF455) JYG33_03780 PF00664 ABC transporter transmembrane region JYG33_03780 PF00005 ABC transporter JYG33_03785 PF02082 Transcriptional regulator JYG33_03790 PF01458 Uncharacterized protein family (UPF0051) JYG33_03795 PF00005 ABC transporter JYG33_03800 PF01458 Uncharacterized protein family (UPF0051) JYG33_03805 PF00266 Aminotransferase class-V JYG33_03810 PF01592 NifU-like N terminal domain JYG33_03815 PF01883 Iron-sulfur cluster assembly protein JYG33_03830 PF01418 Helix-turn-helix domain, rpiR family JYG33_03830 PF01380 SIS domain JYG33_03835 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_03840 PF07687 Peptidase dimerisation domain JYG33_03840 PF01546 Peptidase family M20/M25/M40 JYG33_03845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYG33_03850 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_03855 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_03860 PF00005 ABC transporter JYG33_03860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYG33_03865 PF00795 Carbon-nitrogen hydrolase JYG33_03870 PF07687 Peptidase dimerisation domain JYG33_03870 PF01546 Peptidase family M20/M25/M40 JYG33_03875 PF07364 Metallopeptidase family M81 JYG33_03875 PF07171 MlrC C-terminus JYG33_03920 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_03925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_03930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_03930 PF00034 Cytochrome c JYG33_03935 PF00144 Beta-lactamase JYG33_03940 PF01266 FAD dependent oxidoreductase JYG33_03960 PF03781 Sulfatase-modifying factor enzyme 1 JYG33_03975 PF02386 Cation transport protein JYG33_03980 PF02254 TrkA-N domain JYG33_03980 PF02080 TrkA-C domain JYG33_03985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYG33_03995 PF09424 Yqey-like protein JYG33_04000 PF14579 Helix-hairpin-helix motif JYG33_04000 PF02811 PHP domain JYG33_04000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYG33_04000 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYG33_04030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JYG33_04035 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_04040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_04040 PF03466 LysR substrate binding domain JYG33_04045 PF00768 D-alanyl-D-alanine carboxypeptidase JYG33_04055 PF01618 MotA/TolQ/ExbB proton channel family JYG33_04060 PF13677 Membrane MotB of proton-channel complex MotA/MotB JYG33_04060 PF00691 OmpA family JYG33_04075 PF00296 Luciferase-like monooxygenase JYG33_04080 PF00106 short chain dehydrogenase JYG33_04090 PF00677 Lumazine binding domain JYG33_04100 PF01568 Molydopterin dinucleotide binding domain JYG33_04100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYG33_04100 PF00384 Molybdopterin oxidoreductase JYG33_04105 PF03916 Polysulphide reductase, NrfD JYG33_04110 PF13247 4Fe-4S dicluster domain JYG33_04115 PF07715 TonB-dependent Receptor Plug Domain JYG33_04115 PF00593 TonB dependent receptor JYG33_04125 PF03069 Acetamidase/Formamidase family JYG33_04130 PF01979 Amidohydrolase family JYG33_04135 PF00860 Permease family JYG33_04140 PF00011 Hsp20/alpha crystallin family JYG33_04145 PF03364 Polyketide cyclase / dehydrase and lipid transport JYG33_04145 PF00891 O-methyltransferase domain JYG33_04150 PF01546 Peptidase family M20/M25/M40 JYG33_04150 PF07687 Peptidase dimerisation domain JYG33_04155 PF01546 Peptidase family M20/M25/M40 JYG33_04155 PF07687 Peptidase dimerisation domain JYG33_04165 PF07690 Major Facilitator Superfamily JYG33_04185 PF01494 FAD binding domain JYG33_04190 PF01047 MarR family JYG33_04195 PF09297 NADH pyrophosphatase zinc ribbon domain JYG33_04195 PF00293 NUDIX domain JYG33_04200 PF08340 Domain of unknown function (DUF1732) JYG33_04200 PF03755 YicC-like family, N-terminal region JYG33_04205 PF00149 Calcineurin-like phosphoesterase JYG33_04210 PF13175 AAA ATPase domain JYG33_04215 PF03725 3' exoribonuclease family, domain 2 JYG33_04215 PF01138 3' exoribonuclease family, domain 1 JYG33_04220 PF01725 Ham1 family JYG33_04225 PF04055 Radical SAM superfamily JYG33_04225 PF06969 HemN C-terminal domain JYG33_04230 PF03951 Glutamine synthetase, beta-Grasp domain JYG33_04230 PF00120 Glutamine synthetase, catalytic domain JYG33_04235 PF13673 Acetyltransferase (GNAT) domain JYG33_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_04240 PF03466 LysR substrate binding domain JYG33_04250 PF00005 ABC transporter JYG33_04250 PF08402 TOBE domain JYG33_04255 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_04260 PF13416 Bacterial extracellular solute-binding protein JYG33_04265 PF00175 Oxidoreductase NAD-binding domain JYG33_04265 PF00970 Oxidoreductase FAD-binding domain JYG33_04270 PF01042 Endoribonuclease L-PSP JYG33_04275 PF00270 DEAD/DEAH box helicase JYG33_04275 PF00271 Helicase conserved C-terminal domain JYG33_04275 PF17191 RecG wedge domain JYG33_04280 PF03466 LysR substrate binding domain JYG33_04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_04285 PF00210 Ferritin-like domain JYG33_04290 PF13458 Periplasmic binding protein JYG33_04295 PF17912 MalK OB fold domain JYG33_04295 PF00005 ABC transporter JYG33_04300 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_04305 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_04310 PF13416 Bacterial extracellular solute-binding protein JYG33_04315 PF03807 NADP oxidoreductase coenzyme F420-dependent JYG33_04315 PF14748 Pyrroline-5-carboxylate reductase dimerisation JYG33_04320 PF13458 Periplasmic binding protein JYG33_04325 PF02653 Branched-chain amino acid transport system / permease component JYG33_04330 PF11862 Domain of unknown function (DUF3382) JYG33_04330 PF02653 Branched-chain amino acid transport system / permease component JYG33_04335 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_04335 PF00005 ABC transporter JYG33_04340 PF00005 ABC transporter JYG33_04355 PF00043 Glutathione S-transferase, C-terminal domain JYG33_04355 PF02798 Glutathione S-transferase, N-terminal domain JYG33_04360 PF00326 Prolyl oligopeptidase family JYG33_04365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYG33_04365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYG33_04375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYG33_04375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYG33_04380 PF10415 Fumarase C C-terminus JYG33_04380 PF00206 Lyase JYG33_04385 PF07995 Glucose / Sorbosone dehydrogenase JYG33_04390 PF08241 Methyltransferase domain JYG33_04395 PF00582 Universal stress protein family JYG33_04400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_04405 PF07690 Major Facilitator Superfamily JYG33_04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_04415 PF03466 LysR substrate binding domain JYG33_04425 PF00403 Heavy-metal-associated domain JYG33_04430 PF03466 LysR substrate binding domain JYG33_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_04435 PF10415 Fumarase C C-terminus JYG33_04435 PF00206 Lyase JYG33_04445 PF00083 Sugar (and other) transporter JYG33_04450 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ JYG33_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_04465 PF03466 LysR substrate binding domain JYG33_04470 PF02899 Phage integrase, N-terminal SAM-like domain JYG33_04470 PF00589 Phage integrase family JYG33_04480 PF07732 Multicopper oxidase JYG33_04480 PF07731 Multicopper oxidase JYG33_04480 PF00394 Multicopper oxidase JYG33_04485 PF02222 ATP-grasp domain JYG33_04495 PF03976 Polyphosphate kinase 2 (PPK2) JYG33_04505 PF04463 Protein of unknown function (DUF523) JYG33_04510 PF03466 LysR substrate binding domain JYG33_04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_04515 PF02567 Phenazine biosynthesis-like protein JYG33_04520 PF01042 Endoribonuclease L-PSP JYG33_04540 PF00583 Acetyltransferase (GNAT) family JYG33_04560 PF01292 Prokaryotic cytochrome b561 JYG33_04570 PF04264 YceI-like domain JYG33_04575 PF03960 ArsC family JYG33_04580 PF02798 Glutathione S-transferase, N-terminal domain JYG33_04580 PF00043 Glutathione S-transferase, C-terminal domain JYG33_04590 PF03358 NADPH-dependent FMN reductase JYG33_04595 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_04605 PF01026 TatD related DNase JYG33_04610 PF09115 DNA polymerase III, delta subunit, C terminal JYG33_04620 PF02618 YceG-like family JYG33_04625 PF01571 Aminomethyltransferase folate-binding domain JYG33_04630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYG33_04630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYG33_04640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYG33_04640 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_04640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_04645 PF03658 RnfH family Ubiquitin JYG33_04650 PF03364 Polyketide cyclase / dehydrase and lipid transport JYG33_04655 PF01668 SmpB protein JYG33_04660 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_04665 PF00440 Bacterial regulatory proteins, tetR family JYG33_04670 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JYG33_04670 PF02896 PEP-utilising enzyme, TIM barrel domain JYG33_04670 PF00391 PEP-utilising enzyme, mobile domain JYG33_04675 PF03618 Kinase/pyrophosphorylase JYG33_04690 PF01425 Amidase JYG33_04695 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYG33_04695 PF00588 SpoU rRNA Methylase family JYG33_04700 PF01351 Ribonuclease HII JYG33_04705 PF02684 Lipid-A-disaccharide synthetase JYG33_04710 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JYG33_04710 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_04715 PF07977 FabA-like domain JYG33_04720 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_04720 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JYG33_04725 PF03938 Outer membrane protein (OmpH-like) JYG33_04730 PF01103 Surface antigen JYG33_04730 PF07244 Surface antigen variable number repeat JYG33_04735 PF02163 Peptidase family M50 JYG33_04735 PF13180 PDZ domain JYG33_04735 PF17820 PDZ domain JYG33_04740 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JYG33_04740 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JYG33_04740 PF13288 DXP reductoisomerase C-terminal domain JYG33_04750 PF01255 Putative undecaprenyl diphosphate synthase JYG33_04755 PF01765 Ribosome recycling factor JYG33_04760 PF00696 Amino acid kinase family JYG33_04765 PF00889 Elongation factor TS JYG33_04770 PF00318 Ribosomal protein S2 JYG33_04775 PF00557 Metallopeptidase family M24 JYG33_04780 PF01966 HD domain JYG33_04780 PF01909 Nucleotidyltransferase domain JYG33_04780 PF08335 GlnD PII-uridylyltransferase JYG33_04785 PF01914 MarC family integral membrane protein JYG33_04795 PF00144 Beta-lactamase JYG33_04800 PF00156 Phosphoribosyl transferase domain JYG33_04805 PF02674 Colicin V production protein JYG33_04815 PF02875 Mur ligase family, glutamate ligase domain JYG33_04815 PF08245 Mur ligase middle domain JYG33_04820 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_04820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYG33_04825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYG33_04825 PF00364 Biotin-requiring enzyme JYG33_04825 PF02817 e3 binding domain JYG33_04830 PF17831 Pyruvate dehydrogenase E1 component middle domain JYG33_04830 PF00456 Transketolase, thiamine diphosphate binding domain JYG33_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_04835 PF00989 PAS fold JYG33_04835 PF00512 His Kinase A (phospho-acceptor) domain JYG33_04840 PF00072 Response regulator receiver domain JYG33_04840 PF00196 Bacterial regulatory proteins, luxR family JYG33_04845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JYG33_04845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JYG33_04850 PF01432 Peptidase family M3 JYG33_04855 PF02630 SCO1/SenC JYG33_04860 PF02627 Carboxymuconolactone decarboxylase family JYG33_04865 PF02525 Flavodoxin-like fold JYG33_04875 PF00155 Aminotransferase class I and II JYG33_04875 PF00392 Bacterial regulatory proteins, gntR family JYG33_04880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_04880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYG33_04885 PF09278 MerR, DNA binding JYG33_04885 PF00376 MerR family regulatory protein JYG33_04890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_04895 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JYG33_04900 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_04905 PF01220 Dehydroquinase class II JYG33_04920 PF12697 Alpha/beta hydrolase family JYG33_04925 PF02515 CoA-transferase family III JYG33_04935 PF02803 Thiolase, C-terminal domain JYG33_04935 PF00108 Thiolase, N-terminal domain JYG33_04955 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JYG33_04960 PF02321 Outer membrane efflux protein JYG33_04965 PF00873 AcrB/AcrD/AcrF family JYG33_04970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYG33_04970 PF00529 HlyD membrane-fusion protein of T1SS JYG33_04975 PF09383 NIL domain JYG33_04975 PF00005 ABC transporter JYG33_04995 PF02803 Thiolase, C-terminal domain JYG33_04995 PF00108 Thiolase, N-terminal domain JYG33_05000 PF02803 Thiolase, C-terminal domain JYG33_05000 PF00108 Thiolase, N-terminal domain JYG33_05005 PF00582 Universal stress protein family JYG33_05020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_05020 PF03466 LysR substrate binding domain JYG33_05025 PF01276 Orn/Lys/Arg decarboxylase, major domain JYG33_05025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JYG33_05025 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JYG33_05050 PF00625 Guanylate kinase JYG33_05055 PF01192 RNA polymerase Rpb6 JYG33_05060 PF02824 TGS domain JYG33_05060 PF13291 ACT domain JYG33_05060 PF04607 Region found in RelA / SpoT proteins JYG33_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_05065 PF03466 LysR substrate binding domain JYG33_05070 PF03466 LysR substrate binding domain JYG33_05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_05075 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYG33_05095 PF03591 AzlC protein JYG33_05100 PF01476 LysM domain JYG33_05100 PF08525 Opacity-associated protein A N-terminal motif JYG33_05100 PF01551 Peptidase family M23 JYG33_05105 PF00639 PPIC-type PPIASE domain JYG33_05105 PF09312 SurA N-terminal domain JYG33_05110 PF03009 Glycerophosphoryl diester phosphodiesterase family JYG33_05115 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JYG33_05120 PF01479 S4 domain JYG33_05120 PF00849 RNA pseudouridylate synthase JYG33_05125 PF04345 Chorismate lyase JYG33_05130 PF07690 Major Facilitator Superfamily JYG33_05135 PF00248 Aldo/keto reductase family JYG33_05140 PF00543 Nitrogen regulatory protein P-II JYG33_05145 PF00924 Mechanosensitive ion channel JYG33_05150 PF14698 Argininosuccinate lyase C-terminal JYG33_05150 PF00206 Lyase JYG33_05160 PF01804 Penicillin amidase JYG33_05165 PF01266 FAD dependent oxidoreductase JYG33_05175 PF05958 tRNA (Uracil-5-)-methyltransferase JYG33_05180 PF01551 Peptidase family M23 JYG33_05180 PF01476 LysM domain JYG33_05190 PF01975 Survival protein SurE JYG33_05195 PF02660 Glycerol-3-phosphate acyltransferase JYG33_05200 PF00814 Glycoprotease family JYG33_05205 PF00860 Permease family JYG33_05210 PF00085 Thioredoxin JYG33_05225 PF01205 Uncharacterized protein family UPF0029 JYG33_05230 PF00005 ABC transporter JYG33_05230 PF12848 ABC transporter JYG33_05235 PF02016 LD-carboxypeptidase N-terminal domain JYG33_05235 PF17676 LD-carboxypeptidase C-terminal domain JYG33_05240 PF14437 MafB19-like deaminase JYG33_05245 PF00005 ABC transporter JYG33_05250 PF01061 ABC-2 type transporter JYG33_05260 PF04461 Protein of unknown function (DUF520) JYG33_05265 PF00501 AMP-binding enzyme JYG33_05265 PF13193 AMP-binding enzyme C-terminal domain JYG33_05270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JYG33_05275 PF00117 Glutamine amidotransferase class-I JYG33_05275 PF00958 GMP synthase C terminal domain JYG33_05275 PF02540 NAD synthase JYG33_05280 PF12833 Helix-turn-helix domain JYG33_05285 PF13593 SBF-like CPA transporter family (DUF4137) JYG33_05295 PF08534 Redoxin JYG33_05300 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JYG33_05305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_05315 PF01416 tRNA pseudouridine synthase JYG33_05325 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYG33_05325 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYG33_05330 PF00180 Isocitrate/isopropylmalate dehydrogenase JYG33_05335 PF00694 Aconitase C-terminal domain JYG33_05340 PF00330 Aconitase family (aconitate hydratase) JYG33_05345 PF00155 Aminotransferase class I and II JYG33_05345 PF00392 Bacterial regulatory proteins, gntR family JYG33_05350 PF02627 Carboxymuconolactone decarboxylase family JYG33_05360 PF00072 Response regulator receiver domain JYG33_05360 PF00196 Bacterial regulatory proteins, luxR family JYG33_05365 PF00072 Response regulator receiver domain JYG33_05365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_05365 PF13426 PAS domain JYG33_05365 PF00512 His Kinase A (phospho-acceptor) domain JYG33_05365 PF08448 PAS fold JYG33_05375 PF01264 Chorismate synthase JYG33_05380 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JYG33_05390 PF03631 Virulence factor BrkB JYG33_05400 PF01207 Dihydrouridine synthase (Dus) JYG33_05405 PF01636 Phosphotransferase enzyme family JYG33_05415 PF02321 Outer membrane efflux protein JYG33_05420 PF02687 FtsX-like permease family JYG33_05420 PF12704 MacB-like periplasmic core domain JYG33_05420 PF00005 ABC transporter JYG33_05425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYG33_05435 PF07715 TonB-dependent Receptor Plug Domain JYG33_05435 PF07660 Secretin and TonB N terminus short domain JYG33_05435 PF00593 TonB dependent receptor JYG33_05460 PF00437 Type II/IV secretion system protein JYG33_05465 PF04972 BON domain JYG33_05465 PF13629 Pilus formation protein N terminal region JYG33_05465 PF00263 Bacterial type II and III secretion system protein JYG33_05500 PF07715 TonB-dependent Receptor Plug Domain JYG33_05500 PF07660 Secretin and TonB N terminus short domain JYG33_05500 PF00593 TonB dependent receptor JYG33_05505 PF16220 Domain of unknown function (DUF4880) JYG33_05505 PF04773 FecR protein JYG33_05510 PF04542 Sigma-70 region 2 JYG33_05510 PF08281 Sigma-70, region 4 JYG33_05520 PF07715 TonB-dependent Receptor Plug Domain JYG33_05520 PF00593 TonB dependent receptor JYG33_05525 PF16220 Domain of unknown function (DUF4880) JYG33_05525 PF04773 FecR protein JYG33_05535 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYG33_05540 PF00719 Inorganic pyrophosphatase JYG33_05550 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JYG33_05560 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JYG33_05560 PF03900 Porphobilinogen deaminase, C-terminal domain JYG33_05565 PF03741 Integral membrane protein TerC family JYG33_05570 PF02629 CoA binding domain JYG33_05570 PF00549 CoA-ligase JYG33_05575 PF08442 ATP-grasp domain JYG33_05575 PF00549 CoA-ligase JYG33_05585 PF08267 Cobalamin-independent synthase, N-terminal domain JYG33_05585 PF01717 Cobalamin-independent synthase, Catalytic domain JYG33_05590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_05590 PF03466 LysR substrate binding domain JYG33_05595 PF02631 RecX family JYG33_05600 PF00154 recA bacterial DNA recombination protein JYG33_05605 PF00072 Response regulator receiver domain JYG33_05605 PF00486 Transcriptional regulatory protein, C terminal JYG33_05610 PF00512 His Kinase A (phospho-acceptor) domain JYG33_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_05615 PF08946 Osmosensory transporter coiled coil JYG33_05615 PF00083 Sugar (and other) transporter JYG33_05620 PF04381 Putative exonuclease, RdgC JYG33_05630 PF13193 AMP-binding enzyme C-terminal domain JYG33_05630 PF00501 AMP-binding enzyme JYG33_05635 PF00378 Enoyl-CoA hydratase/isomerase JYG33_05640 PF04341 Protein of unknown function, DUF485 JYG33_05645 PF00474 Sodium:solute symporter family JYG33_05650 PF00171 Aldehyde dehydrogenase family JYG33_05655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYG33_05655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYG33_05670 PF00912 Transglycosylase JYG33_05670 PF00905 Penicillin binding protein transpeptidase domain JYG33_05675 PF00207 Alpha-2-macroglobulin family JYG33_05675 PF07703 Alpha-2-macroglobulin bait region domain JYG33_05675 PF01835 MG2 domain JYG33_05685 PF03060 Nitronate monooxygenase JYG33_05690 PF06969 HemN C-terminal domain JYG33_05690 PF04055 Radical SAM superfamily JYG33_05695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JYG33_05695 PF13244 Domain of unknown function (DUF4040) JYG33_05695 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JYG33_05695 PF00361 Proton-conducting membrane transporter JYG33_05700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JYG33_05705 PF00361 Proton-conducting membrane transporter JYG33_05715 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JYG33_05730 PF07690 Major Facilitator Superfamily JYG33_05730 PF00083 Sugar (and other) transporter JYG33_05740 PF00037 4Fe-4S binding domain JYG33_05740 PF11953 Domain of unknown function (DUF3470) JYG33_05755 PF02705 K+ potassium transporter JYG33_05760 PF00512 His Kinase A (phospho-acceptor) domain JYG33_05760 PF08521 Two-component sensor kinase N-terminal JYG33_05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_05765 PF00072 Response regulator receiver domain JYG33_05765 PF00486 Transcriptional regulatory protein, C terminal JYG33_05770 PF02472 Biopolymer transport protein ExbD/TolR JYG33_05775 PF01618 MotA/TolQ/ExbB proton channel family JYG33_05785 PF00005 ABC transporter JYG33_05785 PF12857 TOBE-like domain JYG33_05790 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_05795 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_05810 PF12706 Beta-lactamase superfamily domain JYG33_05815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_05815 PF03466 LysR substrate binding domain JYG33_05830 PF00216 Bacterial DNA-binding protein JYG33_05835 PF14824 Sirohaem biosynthesis protein central JYG33_05835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYG33_05835 PF10414 Sirohaem synthase dimerisation region JYG33_05840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_05850 PF17805 AsnC-like ligand binding domain JYG33_05850 PF13404 AsnC-type helix-turn-helix domain JYG33_05855 PF17805 AsnC-like ligand binding domain JYG33_05855 PF13404 AsnC-type helix-turn-helix domain JYG33_05860 PF17805 AsnC-like ligand binding domain JYG33_05865 PF04055 Radical SAM superfamily JYG33_05865 PF13186 Iron-sulfur cluster-binding domain JYG33_05870 PF14824 Sirohaem biosynthesis protein central JYG33_05870 PF10414 Sirohaem synthase dimerisation region JYG33_05870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYG33_05875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_05880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_05885 PF00155 Aminotransferase class I and II JYG33_05885 PF00392 Bacterial regulatory proteins, gntR family JYG33_05890 PF01053 Cys/Met metabolism PLP-dependent enzyme JYG33_05895 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYG33_05895 PF00588 SpoU rRNA Methylase family JYG33_05900 PF08206 Ribonuclease B OB domain JYG33_05900 PF17876 Cold shock domain JYG33_05900 PF00575 S1 RNA binding domain JYG33_05900 PF00773 RNB domain JYG33_05900 PF08461 Ribonuclease R winged-helix domain JYG33_05915 PF07690 Major Facilitator Superfamily JYG33_05925 PF03466 LysR substrate binding domain JYG33_05925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_05940 PF04954 Siderophore-interacting protein JYG33_05940 PF08021 Siderophore-interacting FAD-binding domain JYG33_05960 PF18417 L-lysine epsilon oxidase C-terminal domain JYG33_05960 PF17990 L-Lysine epsilon oxidase N-terminal JYG33_05965 PF06750 Bacterial Peptidase A24 N-terminal domain JYG33_05965 PF01478 Type IV leader peptidase family JYG33_05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_05975 PF03466 LysR substrate binding domain JYG33_05980 PF00005 ABC transporter JYG33_05980 PF08402 TOBE domain JYG33_05990 PF13419 Haloacid dehalogenase-like hydrolase JYG33_06000 PF01266 FAD dependent oxidoreductase JYG33_06005 PF01381 Helix-turn-helix JYG33_06020 PF01738 Dienelactone hydrolase family JYG33_06025 PF12843 Putative quorum-sensing-regulated virulence factor JYG33_06030 PF02798 Glutathione S-transferase, N-terminal domain JYG33_06040 PF05726 Pirin C-terminal cupin domain JYG33_06040 PF02678 Pirin JYG33_06050 PF00795 Carbon-nitrogen hydrolase JYG33_06055 PF07690 Major Facilitator Superfamily JYG33_06060 PF07690 Major Facilitator Superfamily JYG33_06065 PF02311 AraC-like ligand binding domain JYG33_06065 PF12833 Helix-turn-helix domain JYG33_06070 PF03594 Benzoate membrane transport protein JYG33_06080 PF03746 LamB/YcsF family JYG33_06085 PF03466 LysR substrate binding domain JYG33_06085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06090 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_06090 PF01799 [2Fe-2S] binding domain JYG33_06095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYG33_06095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYG33_06105 PF01979 Amidohydrolase family JYG33_06110 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JYG33_06115 PF00486 Transcriptional regulatory protein, C terminal JYG33_06115 PF00072 Response regulator receiver domain JYG33_06120 PF00512 His Kinase A (phospho-acceptor) domain JYG33_06120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_06120 PF00672 HAMP domain JYG33_06125 PF02423 Ornithine cyclodeaminase/mu-crystallin family JYG33_06130 PF00384 Molybdopterin oxidoreductase JYG33_06130 PF01568 Molydopterin dinucleotide binding domain JYG33_06135 PF02667 Short chain fatty acid transporter JYG33_06140 PF03466 LysR substrate binding domain JYG33_06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06145 PF04539 Sigma-70 region 3 JYG33_06145 PF04542 Sigma-70 region 2 JYG33_06145 PF00140 Sigma-70 factor, region 1.2 JYG33_06145 PF03979 Sigma-70 factor, region 1.1 JYG33_06145 PF04545 Sigma-70, region 4 JYG33_06145 PF04546 Sigma-70, non-essential region JYG33_06150 PF08275 DNA primase catalytic core, N-terminal domain JYG33_06150 PF01807 CHC2 zinc finger JYG33_06150 PF10410 DnaB-helicase binding domain of primase JYG33_06150 PF08278 DNA primase DnaG DnaB-binding JYG33_06155 PF01165 Ribosomal protein S21 JYG33_06160 PF00156 Phosphoribosyl transferase domain JYG33_06165 PF00709 Adenylosuccinate synthetase JYG33_06170 PF13393 Histidyl-tRNA synthetase JYG33_06175 PF01145 SPFH domain / Band 7 family JYG33_06180 PF01145 SPFH domain / Band 7 family JYG33_06180 PF12221 Bacterial membrane protein N terminal JYG33_06185 PF01926 50S ribosome-binding GTPase JYG33_06185 PF13167 GTP-binding GTPase N-terminal JYG33_06185 PF16360 GTP-binding GTPase Middle Region JYG33_06190 PF17209 Hfq protein JYG33_06195 PF00155 Aminotransferase class I and II JYG33_06200 PF01926 50S ribosome-binding GTPase JYG33_06200 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JYG33_06205 PF13360 PQQ-like domain JYG33_06210 PF09976 Tetratricopeptide repeat-like domain JYG33_06215 PF13393 Histidyl-tRNA synthetase JYG33_06215 PF03129 Anticodon binding domain JYG33_06220 PF04551 GcpE protein JYG33_06230 PF04055 Radical SAM superfamily JYG33_06235 PF00334 Nucleoside diphosphate kinase JYG33_06240 PF08264 Anticodon-binding domain of tRNA JYG33_06240 PF10458 Valyl tRNA synthetase tRNA binding arm JYG33_06240 PF00133 tRNA synthetases class I (I, L, M and V) JYG33_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06250 PF03466 LysR substrate binding domain JYG33_06255 PF00892 EamA-like transporter family JYG33_06260 PF01746 tRNA (Guanine-1)-methyltransferase JYG33_06265 PF01782 RimM N-terminal domain JYG33_06270 PF00886 Ribosomal protein S16 JYG33_06275 PF01206 Sulfurtransferase TusA JYG33_06280 PF01411 tRNA synthetases class II (A) JYG33_06280 PF02272 DHHA1 domain JYG33_06280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYG33_06295 PF00576 HIUase/Transthyretin family JYG33_06325 PF13416 Bacterial extracellular solute-binding protein JYG33_06330 PF01266 FAD dependent oxidoreductase JYG33_06335 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_06335 PF00175 Oxidoreductase NAD-binding domain JYG33_06335 PF00970 Oxidoreductase FAD-binding domain JYG33_06340 PF00521 DNA gyrase/topoisomerase IV, subunit A JYG33_06345 PF00986 DNA gyrase B subunit, carboxyl terminus JYG33_06345 PF01751 Toprim domain JYG33_06345 PF00204 DNA gyrase B JYG33_06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_06350 PF00085 Thioredoxin JYG33_06355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYG33_06355 PF07498 Rho termination factor, N-terminal domain JYG33_06355 PF07497 Rho termination factor, RNA-binding domain JYG33_06360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYG33_06360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYG33_06370 PF00866 Ring hydroxylating beta subunit JYG33_06375 PF00355 Rieske [2Fe-2S] domain JYG33_06375 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYG33_06380 PF00005 ABC transporter JYG33_06380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYG33_06385 PF12911 N-terminal TM domain of oligopeptide transport permease C JYG33_06385 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_06390 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_06395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYG33_06405 PF07729 FCD domain JYG33_06405 PF00392 Bacterial regulatory proteins, gntR family JYG33_06420 PF08335 GlnD PII-uridylyltransferase JYG33_06420 PF03710 Glutamate-ammonia ligase adenylyltransferase JYG33_06425 PF02677 Epoxyqueuosine reductase QueH JYG33_06430 PF00004 ATPase family associated with various cellular activities (AAA) JYG33_06430 PF07724 AAA domain (Cdc48 subfamily) JYG33_06430 PF17871 AAA lid domain JYG33_06430 PF02861 Clp amino terminal domain, pathogenicity island component JYG33_06430 PF10431 C-terminal, D2-small domain, of ClpB protein JYG33_06435 PF13545 Crp-like helix-turn-helix domain JYG33_06435 PF00027 Cyclic nucleotide-binding domain JYG33_06450 PF13746 4Fe-4S dicluster domain JYG33_06450 PF12801 4Fe-4S binding domain JYG33_06450 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JYG33_06455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_06455 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JYG33_06470 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYG33_06480 PF00403 Heavy-metal-associated domain JYG33_06485 PF00463 Isocitrate lyase family JYG33_06490 PF14489 QueF-like protein JYG33_06490 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JYG33_06500 PF01066 CDP-alcohol phosphatidyltransferase JYG33_06505 PF01541 GIY-YIG catalytic domain JYG33_06505 PF02151 UvrB/uvrC motif JYG33_06505 PF08459 UvrC Helix-hairpin-helix N-terminal JYG33_06510 PF00933 Glycosyl hydrolase family 3 N terminal domain JYG33_06515 PF01648 4'-phosphopantetheinyl transferase superfamily JYG33_06520 PF00501 AMP-binding enzyme JYG33_06520 PF14535 AMP-binding enzyme C-terminal domain JYG33_06525 PF03061 Thioesterase superfamily JYG33_06530 PF00378 Enoyl-CoA hydratase/isomerase JYG33_06535 PF00171 Aldehyde dehydrogenase family JYG33_06540 PF00970 Oxidoreductase FAD-binding domain JYG33_06540 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_06540 PF00175 Oxidoreductase NAD-binding domain JYG33_06545 PF01883 Iron-sulfur cluster assembly protein JYG33_06550 PF05138 Phenylacetic acid catabolic protein JYG33_06555 PF06243 Phenylacetic acid degradation B JYG33_06560 PF05138 Phenylacetic acid catabolic protein JYG33_06565 PF00929 Exonuclease JYG33_06570 PF16491 CAAX prenyl protease N-terminal, five membrane helices JYG33_06570 PF01435 Peptidase family M48 JYG33_06575 PF03193 RsgA GTPase JYG33_06585 PF01245 Ribosomal protein L19 JYG33_06595 PF03099 Biotin/lipoate A/B protein ligase family JYG33_06595 PF10437 Bacterial lipoate protein ligase C-terminus JYG33_06605 PF10417 C-terminal domain of 1-Cys peroxiredoxin JYG33_06605 PF00578 AhpC/TSA family JYG33_06610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYG33_06610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_06610 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_06610 PF12806 Acetyl-CoA dehydrogenase C-terminal like JYG33_06615 PF00766 Electron transfer flavoprotein FAD-binding domain JYG33_06615 PF01012 Electron transfer flavoprotein domain JYG33_06620 PF01012 Electron transfer flavoprotein domain JYG33_06625 PF00850 Histone deacetylase domain JYG33_06630 PF13406 Transglycosylase SLT domain JYG33_06635 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_06645 PF01370 NAD dependent epimerase/dehydratase family JYG33_06650 PF00294 pfkB family carbohydrate kinase JYG33_06655 PF18073 Rubredoxin metal binding domain JYG33_06665 PF00216 Bacterial DNA-binding protein JYG33_06670 PF00575 S1 RNA binding domain JYG33_06675 PF02224 Cytidylate kinase JYG33_06680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYG33_06685 PF02153 Prephenate dehydrogenase JYG33_06690 PF01817 Chorismate mutase type II JYG33_06690 PF01842 ACT domain JYG33_06690 PF00800 Prephenate dehydratase JYG33_06695 PF00266 Aminotransferase class-V JYG33_06700 PF00521 DNA gyrase/topoisomerase IV, subunit A JYG33_06700 PF03989 DNA gyrase C-terminal domain, beta-propeller JYG33_06705 PF00691 OmpA family JYG33_06715 PF13419 Haloacid dehalogenase-like hydrolase JYG33_06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06720 PF03466 LysR substrate binding domain JYG33_06725 PF07690 Major Facilitator Superfamily JYG33_06730 PF11953 Domain of unknown function (DUF3470) JYG33_06730 PF00037 4Fe-4S binding domain JYG33_06750 PF00149 Calcineurin-like phosphoesterase JYG33_06755 PF08713 DNA alkylation repair enzyme JYG33_06765 PF00155 Aminotransferase class I and II JYG33_06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06770 PF03466 LysR substrate binding domain JYG33_06775 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYG33_06775 PF02558 Ketopantoate reductase PanE/ApbA JYG33_06780 PF07690 Major Facilitator Superfamily JYG33_06785 PF00440 Bacterial regulatory proteins, tetR family JYG33_06795 PF00005 ABC transporter JYG33_06795 PF16326 ABC transporter C-terminal domain JYG33_06795 PF12848 ABC transporter JYG33_06805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYG33_06815 PF01810 LysE type translocator JYG33_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06820 PF03466 LysR substrate binding domain JYG33_06825 PF00392 Bacterial regulatory proteins, gntR family JYG33_06825 PF00155 Aminotransferase class I and II JYG33_06840 PF14497 Glutathione S-transferase, C-terminal domain JYG33_06840 PF02798 Glutathione S-transferase, N-terminal domain JYG33_06850 PF00375 Sodium:dicarboxylate symporter family JYG33_06855 PF01810 LysE type translocator JYG33_06875 PF00474 Sodium:solute symporter family JYG33_06880 PF00196 Bacterial regulatory proteins, luxR family JYG33_06880 PF00072 Response regulator receiver domain JYG33_06885 PF00672 HAMP domain JYG33_06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_06885 PF00512 His Kinase A (phospho-acceptor) domain JYG33_06885 PF01627 Hpt domain JYG33_06885 PF00072 Response regulator receiver domain JYG33_06895 PF01747 ATP-sulfurylase JYG33_06895 PF14306 PUA-like domain JYG33_06900 PF07690 Major Facilitator Superfamily JYG33_06905 PF00144 Beta-lactamase JYG33_06910 PF03466 LysR substrate binding domain JYG33_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06915 PF17284 Spermidine synthase tetramerisation domain JYG33_06920 PF00512 His Kinase A (phospho-acceptor) domain JYG33_06920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_06925 PF00072 Response regulator receiver domain JYG33_06925 PF00990 Diguanylate cyclase, GGDEF domain JYG33_06930 PF08447 PAS fold JYG33_06930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_06935 PF01169 Uncharacterized protein family UPF0016 JYG33_06945 PF03466 LysR substrate binding domain JYG33_06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_06950 PF02525 Flavodoxin-like fold JYG33_06955 PF00925 GTP cyclohydrolase II JYG33_06970 PF03109 ABC1 family JYG33_06975 PF04228 Putative neutral zinc metallopeptidase JYG33_06995 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYG33_07000 PF01047 MarR family JYG33_07005 PF00543 Nitrogen regulatory protein P-II JYG33_07010 PF00909 Ammonium Transporter Family JYG33_07015 PF01322 Cytochrome C' JYG33_07020 PF08328 Adenylosuccinate lyase C-terminal JYG33_07020 PF00206 Lyase JYG33_07025 PF00043 Glutathione S-transferase, C-terminal domain JYG33_07025 PF13417 Glutathione S-transferase, N-terminal domain JYG33_07035 PF07859 alpha/beta hydrolase fold JYG33_07040 PF01925 Sulfite exporter TauE/SafE JYG33_07050 PF01565 FAD binding domain JYG33_07050 PF02913 FAD linked oxidases, C-terminal domain JYG33_07055 PF00793 DAHP synthetase I family JYG33_07060 PF04328 Selenoprotein, putative JYG33_07065 PF13722 5TM C-terminal transporter carbon starvation CstA JYG33_07065 PF02554 Carbon starvation protein CstA JYG33_07070 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_07075 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_07080 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_07085 PF00005 ABC transporter JYG33_07095 PF05721 Phytanoyl-CoA dioxygenase (PhyH) JYG33_07100 PF06339 Ectoine synthase JYG33_07105 PF00202 Aminotransferase class-III JYG33_07110 PF00583 Acetyltransferase (GNAT) family JYG33_07115 PF01047 MarR family JYG33_07120 PF00892 EamA-like transporter family JYG33_07125 PF01523 Putative modulator of DNA gyrase JYG33_07130 PF00816 H-NS histone family JYG33_07140 PF11940 Domain of unknown function (DUF3458) Ig-like fold JYG33_07140 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JYG33_07140 PF01433 Peptidase family M1 domain JYG33_07145 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JYG33_07150 PF08240 Alcohol dehydrogenase GroES-like domain JYG33_07150 PF00107 Zinc-binding dehydrogenase JYG33_07160 PF00180 Isocitrate/isopropylmalate dehydrogenase JYG33_07165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYG33_07170 PF05872 Bacterial protein of unknown function (DUF853) JYG33_07175 PF01709 Transcriptional regulator JYG33_07180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JYG33_07180 PF02843 Phosphoribosylglycinamide synthetase, C domain JYG33_07180 PF02844 Phosphoribosylglycinamide synthetase, N domain JYG33_07185 PF01218 Coproporphyrinogen III oxidase JYG33_07190 PF01467 Cytidylyltransferase-like JYG33_07200 PF02590 Predicted SPOUT methyltransferase JYG33_07205 PF02545 Maf-like protein JYG33_07210 PF13098 Thioredoxin-like domain JYG33_07230 PF06097 Bacterial protein of unknown function (DUF945) JYG33_07235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYG33_07235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYG33_07240 PF14497 Glutathione S-transferase, C-terminal domain JYG33_07240 PF02798 Glutathione S-transferase, N-terminal domain JYG33_07245 PF02401 LytB protein JYG33_07250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYG33_07255 PF04002 RadC-like JAB domain JYG33_07260 PF01380 SIS domain JYG33_07260 PF01418 Helix-turn-helix domain, rpiR family JYG33_07265 PF00083 Sugar (and other) transporter JYG33_07275 PF07690 Major Facilitator Superfamily JYG33_07280 PF01197 Ribosomal protein L31 JYG33_07290 PF01554 MatE JYG33_07295 PF00571 CBS domain JYG33_07295 PF00005 ABC transporter JYG33_07300 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_07320 PF07690 Major Facilitator Superfamily JYG33_07325 PF00830 Ribosomal L28 family JYG33_07330 PF00471 Ribosomal protein L33 JYG33_07335 PF05163 DinB family JYG33_07350 PF08264 Anticodon-binding domain of tRNA JYG33_07350 PF00133 tRNA synthetases class I (I, L, M and V) JYG33_07350 PF13603 Leucyl-tRNA synthetase, Domain 2 JYG33_07350 PF09334 tRNA synthetases class I (M) JYG33_07360 PF06144 DNA polymerase III, delta subunit JYG33_07360 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JYG33_07365 PF00171 Aldehyde dehydrogenase family JYG33_07370 PF03653 Uncharacterised protein family (UPF0093) JYG33_07375 PF02926 THUMP domain JYG33_07375 PF01170 Putative RNA methylase family UPF0020 JYG33_07385 PF01430 Hsp33 protein JYG33_07395 PF04977 Septum formation initiator JYG33_07400 PF03952 Enolase, N-terminal domain JYG33_07400 PF00113 Enolase, C-terminal TIM barrel domain JYG33_07410 PF07690 Major Facilitator Superfamily JYG33_07425 PF00793 DAHP synthetase I family JYG33_07430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYG33_07435 PF00117 Glutamine amidotransferase class-I JYG33_07435 PF06418 CTP synthase N-terminus JYG33_07440 PF00557 Metallopeptidase family M24 JYG33_07440 PF01321 Creatinase/Prolidase N-terminal domain JYG33_07445 PF01144 Coenzyme A transferase JYG33_07450 PF01144 Coenzyme A transferase JYG33_07465 PF00892 EamA-like transporter family JYG33_07470 PF13193 AMP-binding enzyme C-terminal domain JYG33_07470 PF00501 AMP-binding enzyme JYG33_07470 PF16177 Acetyl-coenzyme A synthetase N-terminus JYG33_07480 PF00877 NlpC/P60 family JYG33_07490 PF03466 LysR substrate binding domain JYG33_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_07495 PF00171 Aldehyde dehydrogenase family JYG33_07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_07500 PF03466 LysR substrate binding domain JYG33_07510 PF00883 Cytosol aminopeptidase family, catalytic domain JYG33_07510 PF02789 Cytosol aminopeptidase family, N-terminal domain JYG33_07520 PF01027 Inhibitor of apoptosis-promoting Bax1 JYG33_07525 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_07540 PF11967 Recombination protein O N terminal JYG33_07540 PF02565 Recombination protein O C terminal JYG33_07545 PF01926 50S ribosome-binding GTPase JYG33_07545 PF07650 KH domain JYG33_07550 PF14622 Ribonuclease-III-like JYG33_07550 PF00035 Double-stranded RNA binding motif JYG33_07555 PF10502 Signal peptidase, peptidase S26 JYG33_07560 PF00679 Elongation factor G C-terminus JYG33_07560 PF06421 GTP-binding protein LepA C-terminus JYG33_07560 PF00009 Elongation factor Tu GTP binding domain JYG33_07560 PF03144 Elongation factor Tu domain 2 JYG33_07565 PF13180 PDZ domain JYG33_07580 PF04542 Sigma-70 region 2 JYG33_07580 PF08281 Sigma-70, region 4 JYG33_07590 PF02801 Beta-ketoacyl synthase, C-terminal domain JYG33_07590 PF00109 Beta-ketoacyl synthase, N-terminal domain JYG33_07595 PF00550 Phosphopantetheine attachment site JYG33_07605 PF00698 Acyl transferase domain JYG33_07610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYG33_07610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYG33_07615 PF02504 Fatty acid synthesis protein JYG33_07620 PF01783 Ribosomal L32p protein family JYG33_07625 PF02620 Large ribosomal RNA subunit accumulation protein YceD JYG33_07630 PF02545 Maf-like protein JYG33_07635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYG33_07640 PF01510 N-acetylmuramoyl-L-alanine amidase JYG33_07645 PF01794 Ferric reductase like transmembrane component JYG33_07650 PF00174 Oxidoreductase molybdopterin binding domain JYG33_07655 PF13419 Haloacid dehalogenase-like hydrolase JYG33_07660 PF00849 RNA pseudouridylate synthase JYG33_07660 PF01479 S4 domain JYG33_07665 PF12111 Polyribonucleotide phosphorylase C terminal JYG33_07665 PF10150 Ribonuclease E/G family JYG33_07665 PF00575 S1 RNA binding domain JYG33_07670 PF01039 Carboxyl transferase domain JYG33_07670 PF17848 Acetyl-coA carboxylase zinc finger domain JYG33_07675 PF00290 Tryptophan synthase alpha chain JYG33_07680 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_07685 PF04607 Region found in RelA / SpoT proteins JYG33_07685 PF13291 ACT domain JYG33_07685 PF02824 TGS domain JYG33_07695 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JYG33_07695 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JYG33_07700 PF11953 Domain of unknown function (DUF3470) JYG33_07700 PF00037 4Fe-4S binding domain JYG33_07710 PF04060 Putative Fe-S cluster JYG33_07715 PF00730 HhH-GPD superfamily base excision DNA repair protein JYG33_07715 PF00633 Helix-hairpin-helix motif JYG33_07715 PF10576 Iron-sulfur binding domain of endonuclease III JYG33_07720 PF00005 ABC transporter JYG33_07725 PF03922 OmpW family JYG33_07730 PF00005 ABC transporter JYG33_07735 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_07735 PF00005 ABC transporter JYG33_07750 PF01641 SelR domain JYG33_07755 PF04279 Intracellular septation protein A JYG33_07770 PF12826 Helix-hairpin-helix motif JYG33_07770 PF00533 BRCA1 C Terminus (BRCT) domain JYG33_07770 PF01653 NAD-dependent DNA ligase adenylation domain JYG33_07770 PF03120 NAD-dependent DNA ligase OB-fold domain JYG33_07770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JYG33_07780 PF02463 RecF/RecN/SMC N terminal domain JYG33_07780 PF06470 SMC proteins Flexible Hinge Domain JYG33_07785 PF07690 Major Facilitator Superfamily JYG33_07790 PF03167 Uracil DNA glycosylase superfamily JYG33_07795 PF00814 Glycoprotease family JYG33_07800 PF00072 Response regulator receiver domain JYG33_07800 PF00486 Transcriptional regulatory protein, C terminal JYG33_07805 PF00672 HAMP domain JYG33_07805 PF00512 His Kinase A (phospho-acceptor) domain JYG33_07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_07810 PF02542 YgbB family JYG33_07815 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JYG33_07820 PF02559 CarD-like/TRCF domain JYG33_07820 PF17757 UvrB interaction domain JYG33_07820 PF00271 Helicase conserved C-terminal domain JYG33_07820 PF03461 TRCF domain JYG33_07820 PF00270 DEAD/DEAH box helicase JYG33_07830 PF03060 Nitronate monooxygenase JYG33_07840 PF00361 Proton-conducting membrane transporter JYG33_07845 PF00361 Proton-conducting membrane transporter JYG33_07845 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus JYG33_07850 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JYG33_07850 PF00361 Proton-conducting membrane transporter JYG33_07855 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JYG33_07860 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JYG33_07865 PF12838 4Fe-4S dicluster domain JYG33_07870 PF00146 NADH dehydrogenase JYG33_07875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JYG33_07875 PF00384 Molybdopterin oxidoreductase JYG33_07875 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JYG33_07880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYG33_07880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYG33_07880 PF10531 SLBB domain JYG33_07890 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JYG33_07895 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JYG33_07900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JYG33_07905 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JYG33_07910 PF13609 Gram-negative porin JYG33_07920 PF03840 Preprotein translocase SecG subunit JYG33_07925 PF00121 Triosephosphate isomerase JYG33_07930 PF08240 Alcohol dehydrogenase GroES-like domain JYG33_07930 PF00107 Zinc-binding dehydrogenase JYG33_07945 PF00575 S1 RNA binding domain JYG33_07945 PF01138 3' exoribonuclease family, domain 1 JYG33_07945 PF03725 3' exoribonuclease family, domain 2 JYG33_07945 PF00013 KH domain JYG33_07945 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JYG33_07950 PF00312 Ribosomal protein S15 JYG33_07955 PF01066 CDP-alcohol phosphatidyltransferase JYG33_07960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JYG33_07960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JYG33_07965 PF10369 Small subunit of acetolactate synthase JYG33_07970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYG33_07970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYG33_07970 PF00205 Thiamine pyrophosphate enzyme, central domain JYG33_07975 PF12805 FUSC-like inner membrane protein yccS JYG33_07980 PF03883 Peroxide stress protein YaaA JYG33_08005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYG33_08005 PF02403 Seryl-tRNA synthetase N-terminal domain JYG33_08010 PF00004 ATPase family associated with various cellular activities (AAA) JYG33_08010 PF16193 AAA C-terminal domain JYG33_08010 PF12002 MgsA AAA+ ATPase C terminal JYG33_08015 PF03548 Outer membrane lipoprotein carrier protein LolA JYG33_08020 PF09397 Ftsk gamma domain JYG33_08020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JYG33_08020 PF17854 FtsK alpha domain JYG33_08020 PF01580 FtsK/SpoIIIE family JYG33_08025 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_08045 PF07690 Major Facilitator Superfamily JYG33_08065 PF00135 Carboxylesterase family JYG33_08070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_08070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JYG33_08075 PF00180 Isocitrate/isopropylmalate dehydrogenase JYG33_08090 PF00034 Cytochrome c JYG33_08095 PF17862 AAA+ lid domain JYG33_08095 PF01434 Peptidase family M41 JYG33_08095 PF00004 ATPase family associated with various cellular activities (AAA) JYG33_08115 PF00072 Response regulator receiver domain JYG33_08115 PF00158 Sigma-54 interaction domain JYG33_08115 PF02954 Bacterial regulatory protein, Fis family JYG33_08145 PF00437 Type II/IV secretion system protein JYG33_08155 PF13629 Pilus formation protein N terminal region JYG33_08155 PF04972 BON domain JYG33_08155 PF00263 Bacterial type II and III secretion system protein JYG33_08185 PF08479 POTRA domain, ShlB-type JYG33_08185 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JYG33_08215 PF00675 Insulinase (Peptidase family M16) JYG33_08215 PF05193 Peptidase M16 inactive domain JYG33_08220 PF00226 DnaJ domain JYG33_08220 PF01556 DnaJ C terminal domain JYG33_08220 PF00684 DnaJ central domain JYG33_08225 PF00012 Hsp70 protein JYG33_08230 PF01025 GrpE JYG33_08235 PF00762 Ferrochelatase JYG33_08240 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JYG33_08240 PF01628 HrcA protein C terminal domain JYG33_08245 PF01513 ATP-NAD kinase JYG33_08250 PF02463 RecF/RecN/SMC N terminal domain JYG33_08255 PF01475 Ferric uptake regulator family JYG33_08260 PF04355 SmpA / OmlA family JYG33_08265 PF05173 Dihydrodipicolinate reductase, C-terminus JYG33_08265 PF01113 Dihydrodipicolinate reductase, N-terminus JYG33_08280 PF00561 alpha/beta hydrolase fold JYG33_08285 PF00465 Iron-containing alcohol dehydrogenase JYG33_08290 PF07690 Major Facilitator Superfamily JYG33_08295 PF00375 Sodium:dicarboxylate symporter family JYG33_08305 PF01565 FAD binding domain JYG33_08305 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JYG33_08325 PF00732 GMC oxidoreductase JYG33_08325 PF05199 GMC oxidoreductase JYG33_08340 PF02321 Outer membrane efflux protein JYG33_08345 PF13533 Biotin-lipoyl like JYG33_08365 PF07690 Major Facilitator Superfamily JYG33_08380 PF07715 TonB-dependent Receptor Plug Domain JYG33_08380 PF07660 Secretin and TonB N terminus short domain JYG33_08380 PF00593 TonB dependent receptor JYG33_08385 PF07690 Major Facilitator Superfamily JYG33_08395 PF00756 Putative esterase JYG33_08420 PF00465 Iron-containing alcohol dehydrogenase JYG33_08425 PF00005 ABC transporter JYG33_08430 PF00005 ABC transporter JYG33_08440 PF02653 Branched-chain amino acid transport system / permease component JYG33_08450 PF00171 Aldehyde dehydrogenase family JYG33_08455 PF09339 IclR helix-turn-helix domain JYG33_08455 PF01614 Bacterial transcriptional regulator JYG33_08460 PF07690 Major Facilitator Superfamily JYG33_08465 PF00376 MerR family regulatory protein JYG33_08465 PF09278 MerR, DNA binding JYG33_08470 PF03880 DbpA RNA binding domain JYG33_08470 PF00271 Helicase conserved C-terminal domain JYG33_08470 PF00270 DEAD/DEAH box helicase JYG33_08485 PF03466 LysR substrate binding domain JYG33_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_08490 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYG33_08490 PF00355 Rieske [2Fe-2S] domain JYG33_08495 PF00866 Ring hydroxylating beta subunit JYG33_08500 PF00355 Rieske [2Fe-2S] domain JYG33_08505 PF00106 short chain dehydrogenase JYG33_08510 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_08510 PF14759 Reductase C-terminal JYG33_08515 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYG33_08520 PF12697 Alpha/beta hydrolase family JYG33_08525 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYG33_08530 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation JYG33_08530 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYG33_08535 PF07836 DmpG-like communication domain JYG33_08535 PF00682 HMGL-like JYG33_08540 PF07690 Major Facilitator Superfamily JYG33_08555 PF02753 Pili assembly chaperone PapD, C-terminal domain JYG33_08555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYG33_08560 PF13953 PapC C-terminal domain JYG33_08560 PF13954 PapC N-terminal domain JYG33_08560 PF00577 Outer membrane usher protein JYG33_08565 PF00072 Response regulator receiver domain JYG33_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_08565 PF00512 His Kinase A (phospho-acceptor) domain JYG33_08565 PF09456 RcsC Alpha-Beta-Loop (ABL) JYG33_08570 PF00072 Response regulator receiver domain JYG33_08570 PF09456 RcsC Alpha-Beta-Loop (ABL) JYG33_08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_08570 PF00512 His Kinase A (phospho-acceptor) domain JYG33_08575 PF00196 Bacterial regulatory proteins, luxR family JYG33_08575 PF00072 Response regulator receiver domain JYG33_08580 PF00563 EAL domain JYG33_08580 PF01590 GAF domain JYG33_08580 PF00990 Diguanylate cyclase, GGDEF domain JYG33_08580 PF00989 PAS fold JYG33_08595 PF01425 Amidase JYG33_08600 PF00392 Bacterial regulatory proteins, gntR family JYG33_08600 PF00155 Aminotransferase class I and II JYG33_08605 PF07690 Major Facilitator Superfamily JYG33_08625 PF11339 Protein of unknown function (DUF3141) JYG33_08630 PF02803 Thiolase, C-terminal domain JYG33_08630 PF00108 Thiolase, N-terminal domain JYG33_08635 PF00106 short chain dehydrogenase JYG33_08650 PF00005 ABC transporter JYG33_08655 PF13533 Biotin-lipoyl like JYG33_08660 PF02321 Outer membrane efflux protein JYG33_08665 PF00561 alpha/beta hydrolase fold JYG33_08665 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JYG33_08675 PF02592 Putative vitamin uptake transporter JYG33_08680 PF06508 Queuosine biosynthesis protein QueC JYG33_08695 PF00464 Serine hydroxymethyltransferase JYG33_08700 PF00266 Aminotransferase class-V JYG33_08705 PF00392 Bacterial regulatory proteins, gntR family JYG33_08705 PF00155 Aminotransferase class I and II JYG33_08710 PF00464 Serine hydroxymethyltransferase JYG33_08725 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JYG33_08725 PF00117 Glutamine amidotransferase class-I JYG33_08730 PF08543 Phosphomethylpyrimidine kinase JYG33_08735 PF02028 BCCT, betaine/carnitine/choline family transporter JYG33_08740 PF00376 MerR family regulatory protein JYG33_08740 PF09278 MerR, DNA binding JYG33_08745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYG33_08745 PF00529 HlyD membrane-fusion protein of T1SS JYG33_08750 PF00873 AcrB/AcrD/AcrF family JYG33_08775 PF02293 AmiS/UreI family transporter JYG33_08795 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYG33_08800 PF00155 Aminotransferase class I and II JYG33_08800 PF00392 Bacterial regulatory proteins, gntR family JYG33_08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_08810 PF03466 LysR substrate binding domain JYG33_08815 PF00202 Aminotransferase class-III JYG33_08820 PF01177 Asp/Glu/Hydantoin racemase JYG33_08835 PF05506 Domain of unknown function (DUF756) JYG33_08835 PF04185 Phosphoesterase family JYG33_08850 PF00691 OmpA family JYG33_08850 PF01389 OmpA-like transmembrane domain JYG33_08855 PF13018 Extended Signal Peptide of Type V secretion system JYG33_08855 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin JYG33_08855 PF03895 YadA-like membrane anchor domain JYG33_08855 PF05662 Coiled stalk of trimeric autotransporter adhesin JYG33_08865 PF02796 Helix-turn-helix domain of resolvase JYG33_08865 PF00239 Resolvase, N terminal domain JYG33_08870 PF00482 Type II secretion system (T2SS), protein F JYG33_08875 PF00437 Type II/IV secretion system protein JYG33_08880 PF00263 Bacterial type II and III secretion system protein JYG33_08880 PF03958 Bacterial type II/III secretion system short domain JYG33_08905 PF07963 Prokaryotic N-terminal methylation motif JYG33_08905 PF11612 Type II secretion system (T2SS), protein J JYG33_08915 PF12019 Type II transport protein GspH JYG33_08915 PF07963 Prokaryotic N-terminal methylation motif JYG33_08920 PF07963 Prokaryotic N-terminal methylation motif JYG33_08920 PF08334 Type II secretion system (T2SS), protein G JYG33_08930 PF00478 IMP dehydrogenase / GMP reductase domain JYG33_08930 PF00571 CBS domain JYG33_08935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYG33_08945 PF10415 Fumarase C C-terminus JYG33_08945 PF00206 Lyase JYG33_08950 PF01047 MarR family JYG33_08965 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JYG33_08970 PF04377 Arginine-tRNA-protein transferase, C terminus JYG33_08970 PF04376 Arginine-tRNA-protein transferase, N terminus JYG33_08975 PF01180 Dihydroorotate dehydrogenase JYG33_08985 PF09339 IclR helix-turn-helix domain JYG33_08985 PF01614 Bacterial transcriptional regulator JYG33_09005 PF00271 Helicase conserved C-terminal domain JYG33_09005 PF00270 DEAD/DEAH box helicase JYG33_09025 PF00561 alpha/beta hydrolase fold JYG33_09030 PF01435 Peptidase family M48 JYG33_09050 PF01494 FAD binding domain JYG33_09055 PF01207 Dihydrouridine synthase (Dus) JYG33_09060 PF02954 Bacterial regulatory protein, Fis family JYG33_09065 PF01808 AICARFT/IMPCHase bienzyme JYG33_09065 PF02142 MGS-like domain JYG33_09070 PF02075 Crossover junction endodeoxyribonuclease RuvC JYG33_09075 PF07499 RuvA, C-terminal domain JYG33_09075 PF01330 RuvA N terminal domain JYG33_09080 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_09085 PF05496 Holliday junction DNA helicase RuvB P-loop domain JYG33_09085 PF05491 RuvB C-terminal winged helix domain JYG33_09085 PF17864 RuvB AAA lid domain JYG33_09095 PF01979 Amidohydrolase family JYG33_09105 PF00875 DNA photolyase JYG33_09105 PF03441 FAD binding domain of DNA photolyase JYG33_09145 PF00581 Rhodanese-like domain JYG33_09150 PF04143 Sulphur transport JYG33_09165 PF01625 Peptide methionine sulfoxide reductase JYG33_09170 PF00034 Cytochrome c JYG33_09175 PF01790 Prolipoprotein diacylglyceryl transferase JYG33_09200 PF01970 Tripartite tricarboxylate transporter TctA family JYG33_09205 PF01266 FAD dependent oxidoreductase JYG33_09210 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_09215 PF08402 TOBE domain JYG33_09215 PF00005 ABC transporter JYG33_09225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYG33_09225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYG33_09230 PF00512 His Kinase A (phospho-acceptor) domain JYG33_09230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_09235 PF00486 Transcriptional regulatory protein, C terminal JYG33_09235 PF00072 Response regulator receiver domain JYG33_09240 PF00293 NUDIX domain JYG33_09245 PF04073 Aminoacyl-tRNA editing domain JYG33_09245 PF03129 Anticodon binding domain JYG33_09245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYG33_09250 PF03061 Thioesterase superfamily JYG33_09255 PF01618 MotA/TolQ/ExbB proton channel family JYG33_09260 PF02472 Biopolymer transport protein ExbD/TolR JYG33_09270 PF07676 WD40-like Beta Propeller Repeat JYG33_09270 PF04052 TolB amino-terminal domain JYG33_09275 PF00691 OmpA family JYG33_09285 PF00561 alpha/beta hydrolase fold JYG33_09300 PF01554 MatE JYG33_09305 PF02608 ABC transporter substrate-binding protein PnrA-like JYG33_09310 PF02653 Branched-chain amino acid transport system / permease component JYG33_09315 PF02653 Branched-chain amino acid transport system / permease component JYG33_09320 PF00005 ABC transporter JYG33_09330 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain JYG33_09330 PF01113 Dihydrodipicolinate reductase, N-terminus JYG33_09335 PF01810 LysE type translocator JYG33_09340 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JYG33_09340 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JYG33_09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_09345 PF03466 LysR substrate binding domain JYG33_09350 PF13192 Thioredoxin domain JYG33_09350 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_09355 PF10417 C-terminal domain of 1-Cys peroxiredoxin JYG33_09355 PF00578 AhpC/TSA family JYG33_09360 PF00155 Aminotransferase class I and II JYG33_09360 PF00392 Bacterial regulatory proteins, gntR family JYG33_09365 PF00892 EamA-like transporter family JYG33_09370 PF01507 Phosphoadenosine phosphosulfate reductase family JYG33_09375 PF01507 Phosphoadenosine phosphosulfate reductase family JYG33_09380 PF00009 Elongation factor Tu GTP binding domain JYG33_09385 PF00871 Acetokinase family JYG33_09390 PF01515 Phosphate acetyl/butaryl transferase JYG33_09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_09400 PF03466 LysR substrate binding domain JYG33_09405 PF02678 Pirin JYG33_09405 PF17954 Quercetinase C-terminal cupin domain JYG33_09410 PF17158 Membrane-associated sensor, integral membrane domain JYG33_09410 PF00990 Diguanylate cyclase, GGDEF domain JYG33_09415 PF01425 Amidase JYG33_09440 PF00166 Chaperonin 10 Kd subunit JYG33_09445 PF00118 TCP-1/cpn60 chaperonin family JYG33_09450 PF01219 Prokaryotic diacylglycerol kinase JYG33_09455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYG33_09465 PF02515 CoA-transferase family III JYG33_09470 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_09475 PF09339 IclR helix-turn-helix domain JYG33_09475 PF01614 Bacterial transcriptional regulator JYG33_09480 PF02464 Competence-damaged protein JYG33_09485 PF04608 Phosphatidylglycerophosphatase A JYG33_09490 PF00586 AIR synthase related protein, N-terminal domain JYG33_09490 PF02769 AIR synthase related protein, C-terminal domain JYG33_09495 PF01029 NusB family JYG33_09500 PF00885 6,7-dimethyl-8-ribityllumazine synthase JYG33_09505 PF00925 GTP cyclohydrolase II JYG33_09505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JYG33_09520 PF02881 SRP54-type protein, helical bundle domain JYG33_09520 PF00448 SRP54-type protein, GTPase domain JYG33_09530 PF01467 Cytidylyltransferase-like JYG33_09535 PF00037 4Fe-4S binding domain JYG33_09550 PF01053 Cys/Met metabolism PLP-dependent enzyme JYG33_09560 PF02423 Ornithine cyclodeaminase/mu-crystallin family JYG33_09565 PF07238 PilZ domain JYG33_09565 PF07317 Flagellar regulator YcgR JYG33_09590 PF00857 Isochorismatase family JYG33_09600 PF00561 alpha/beta hydrolase fold JYG33_09605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYG33_09605 PF00034 Cytochrome c JYG33_09605 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_09610 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_09610 PF01799 [2Fe-2S] binding domain JYG33_09615 PF00034 Cytochrome c JYG33_09615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_09615 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYG33_09625 PF00005 ABC transporter JYG33_09630 PF00005 ABC transporter JYG33_09630 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_09640 PF13458 Periplasmic binding protein JYG33_09645 PF01804 Penicillin amidase JYG33_09650 PF17158 Membrane-associated sensor, integral membrane domain JYG33_09650 PF00990 Diguanylate cyclase, GGDEF domain JYG33_09655 PF03466 LysR substrate binding domain JYG33_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_09660 PF00884 Sulfatase JYG33_09660 PF16347 Domain of unknown function (DUF4976) JYG33_09665 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_09675 PF00753 Metallo-beta-lactamase superfamily JYG33_09675 PF12706 Beta-lactamase superfamily domain JYG33_09680 PF00392 Bacterial regulatory proteins, gntR family JYG33_09680 PF07702 UTRA domain JYG33_09690 PF13091 PLD-like domain JYG33_09700 PF01256 Carbohydrate kinase JYG33_09700 PF03853 YjeF-related protein N-terminus JYG33_09705 PF02625 XdhC and CoxI family JYG33_09705 PF13478 XdhC Rossmann domain JYG33_09710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_09720 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_09725 PF00005 ABC transporter JYG33_09735 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_09735 PF01799 [2Fe-2S] binding domain JYG33_09740 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYG33_09740 PF00941 FAD binding domain in molybdopterin dehydrogenase JYG33_09745 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYG33_09745 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYG33_09750 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_09755 PF00355 Rieske [2Fe-2S] domain JYG33_09760 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_09760 PF14759 Reductase C-terminal JYG33_09765 PF00355 Rieske [2Fe-2S] domain JYG33_09765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYG33_09775 PF00857 Isochorismatase family JYG33_09785 PF00561 alpha/beta hydrolase fold JYG33_09795 PF01047 MarR family JYG33_09800 PF00005 ABC transporter JYG33_09805 PF01032 FecCD transport family JYG33_09815 PF07715 TonB-dependent Receptor Plug Domain JYG33_09815 PF00593 TonB dependent receptor JYG33_09820 PF02667 Short chain fatty acid transporter JYG33_09830 PF01979 Amidohydrolase family JYG33_09835 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_09845 PF00929 Exonuclease JYG33_09850 PF00873 AcrB/AcrD/AcrF family JYG33_09855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYG33_09860 PF00075 RNase H JYG33_09865 PF08241 Methyltransferase domain JYG33_09870 PF00753 Metallo-beta-lactamase superfamily JYG33_09870 PF16123 Hydroxyacylglutathione hydrolase C-terminus JYG33_09875 PF01476 LysM domain JYG33_09875 PF01464 Transglycosylase SLT domain JYG33_09885 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_09890 PF09084 NMT1/THI5 like JYG33_09895 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYG33_09895 PF00941 FAD binding domain in molybdopterin dehydrogenase JYG33_09900 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_09900 PF01799 [2Fe-2S] binding domain JYG33_09905 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYG33_09905 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYG33_09915 PF01047 MarR family JYG33_09920 PF00072 Response regulator receiver domain JYG33_09920 PF02954 Bacterial regulatory protein, Fis family JYG33_09920 PF00158 Sigma-54 interaction domain JYG33_09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_09925 PF00512 His Kinase A (phospho-acceptor) domain JYG33_09930 PF00375 Sodium:dicarboxylate symporter family JYG33_09940 PF17773 UPF0176 acylphosphatase like domain JYG33_09940 PF00581 Rhodanese-like domain JYG33_09960 PF04073 Aminoacyl-tRNA editing domain JYG33_09965 PF05995 Cysteine dioxygenase type I JYG33_09970 PF00378 Enoyl-CoA hydratase/isomerase JYG33_09975 PF13380 CoA binding domain JYG33_09975 PF13607 Succinyl-CoA ligase like flavodoxin domain JYG33_09980 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_09985 PF00107 Zinc-binding dehydrogenase JYG33_09985 PF08240 Alcohol dehydrogenase GroES-like domain JYG33_09990 PF02515 CoA-transferase family III JYG33_09995 PF00378 Enoyl-CoA hydratase/isomerase JYG33_10015 PF08240 Alcohol dehydrogenase GroES-like domain JYG33_10015 PF00107 Zinc-binding dehydrogenase JYG33_10020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYG33_10025 PF03466 LysR substrate binding domain JYG33_10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_10040 PF04185 Phosphoesterase family JYG33_10040 PF05506 Domain of unknown function (DUF756) JYG33_10045 PF03466 LysR substrate binding domain JYG33_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_10050 PF13419 Haloacid dehalogenase-like hydrolase JYG33_10055 PF00465 Iron-containing alcohol dehydrogenase JYG33_10060 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_10065 PF00005 ABC transporter JYG33_10075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_10075 PF03466 LysR substrate binding domain JYG33_10080 PF00501 AMP-binding enzyme JYG33_10080 PF13193 AMP-binding enzyme C-terminal domain JYG33_10090 PF01810 LysE type translocator JYG33_10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_10095 PF03466 LysR substrate binding domain JYG33_10105 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_10110 PF08240 Alcohol dehydrogenase GroES-like domain JYG33_10110 PF00107 Zinc-binding dehydrogenase JYG33_10115 PF04444 Catechol dioxygenase N terminus JYG33_10115 PF00775 Dioxygenase JYG33_10120 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_10130 PF03466 LysR substrate binding domain JYG33_10140 PF02040 Arsenical pump membrane protein JYG33_10145 PF03960 ArsC family JYG33_10150 PF03358 NADPH-dependent FMN reductase JYG33_10155 PF00072 Response regulator receiver domain JYG33_10155 PF00486 Transcriptional regulatory protein, C terminal JYG33_10160 PF08521 Two-component sensor kinase N-terminal JYG33_10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_10160 PF00512 His Kinase A (phospho-acceptor) domain JYG33_10175 PF01053 Cys/Met metabolism PLP-dependent enzyme JYG33_10190 PF00583 Acetyltransferase (GNAT) family JYG33_10195 PF12833 Helix-turn-helix domain JYG33_10195 PF01965 DJ-1/PfpI family JYG33_10205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYG33_10205 PF01872 RibD C-terminal domain JYG33_10210 PF03477 ATP cone domain JYG33_10215 PF00464 Serine hydroxymethyltransferase JYG33_10220 PF01161 Phosphatidylethanolamine-binding protein JYG33_10225 PF01479 S4 domain JYG33_10225 PF00579 tRNA synthetases class I (W and Y) JYG33_10230 PF04225 Opacity-associated protein A LysM-like domain JYG33_10230 PF01551 Peptidase family M23 JYG33_10235 PF03702 Anhydro-N-acetylmuramic acid kinase JYG33_10240 PF01521 Iron-sulphur cluster biosynthesis JYG33_10250 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYG33_10250 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYG33_10255 PF00380 Ribosomal protein S9/S16 JYG33_10260 PF00572 Ribosomal protein L13 JYG33_10265 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_10270 PF01523 Putative modulator of DNA gyrase JYG33_10275 PF04751 Protein of unknown function (DUF615) JYG33_10285 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JYG33_10285 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JYG33_10295 PF00689 Cation transporting ATPase, C-terminus JYG33_10295 PF00690 Cation transporter/ATPase, N-terminus JYG33_10300 PF00072 Response regulator receiver domain JYG33_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_10300 PF00512 His Kinase A (phospho-acceptor) domain JYG33_10300 PF13426 PAS domain JYG33_10300 PF08448 PAS fold JYG33_10305 PF00196 Bacterial regulatory proteins, luxR family JYG33_10305 PF00072 Response regulator receiver domain JYG33_10310 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYG33_10315 PF01979 Amidohydrolase family JYG33_10320 PF00860 Permease family JYG33_10325 PF12697 Alpha/beta hydrolase family JYG33_10330 PF00355 Rieske [2Fe-2S] domain JYG33_10340 PF00970 Oxidoreductase FAD-binding domain JYG33_10340 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_10345 PF03466 LysR substrate binding domain JYG33_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_10350 PF07152 YaeQ protein JYG33_10360 PF01037 Lrp/AsnC ligand binding domain JYG33_10375 PF02325 YGGT family JYG33_10385 PF02805 Metal binding domain of Ada JYG33_10385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYG33_10385 PF12833 Helix-turn-helix domain JYG33_10385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYG33_10390 PF05433 Glycine zipper 2TM domain JYG33_10395 PF00294 pfkB family carbohydrate kinase JYG33_10410 PF00289 Biotin carboxylase, N-terminal domain JYG33_10410 PF02785 Biotin carboxylase C-terminal domain JYG33_10410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYG33_10415 PF00364 Biotin-requiring enzyme JYG33_10420 PF01220 Dehydroquinase class II JYG33_10425 PF00578 AhpC/TSA family JYG33_10430 PF01225 Mur ligase family, catalytic domain JYG33_10430 PF02875 Mur ligase family, glutamate ligase domain JYG33_10430 PF08245 Mur ligase middle domain JYG33_10435 PF05728 Uncharacterised protein family (UPF0227) JYG33_10450 PF08501 Shikimate dehydrogenase substrate binding domain JYG33_10450 PF01488 Shikimate / quinate 5-dehydrogenase JYG33_10450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYG33_10455 PF00912 Transglycosylase JYG33_10465 PF00149 Calcineurin-like phosphoesterase JYG33_10470 PF01553 Acyltransferase JYG33_10475 PF03652 Holliday junction resolvase JYG33_10480 PF02622 Uncharacterized ACR, COG1678 JYG33_10485 PF00301 Rubredoxin JYG33_10495 PF02581 Thiamine monophosphate synthase JYG33_10500 PF00202 Aminotransferase class-III JYG33_10505 PF13193 AMP-binding enzyme C-terminal domain JYG33_10505 PF00501 AMP-binding enzyme JYG33_10515 PF01960 ArgJ family JYG33_10525 PF05532 CsbD-like JYG33_10530 PF00829 Ribosomal prokaryotic L21 protein JYG33_10535 PF01016 Ribosomal L27 protein JYG33_10540 PF01018 GTP1/OBG JYG33_10540 PF01926 50S ribosome-binding GTPase JYG33_10545 PF00696 Amino acid kinase family JYG33_10545 PF01472 PUA domain JYG33_10550 PF01266 FAD dependent oxidoreductase JYG33_10570 PF13667 ThiC-associated domain JYG33_10570 PF01964 Radical SAM ThiC family JYG33_10575 PF00691 OmpA family JYG33_10575 PF05736 OprF membrane domain JYG33_10580 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_10585 PF00005 ABC transporter JYG33_10590 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_10595 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_10600 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_10605 PF00005 ABC transporter JYG33_10610 PF18075 FtsX extracellular domain JYG33_10615 PF00730 HhH-GPD superfamily base excision DNA repair protein JYG33_10615 PF00633 Helix-hairpin-helix motif JYG33_10615 PF14815 NUDIX domain JYG33_10620 PF01098 Cell cycle protein JYG33_10625 PF03717 Penicillin-binding Protein dimerisation domain JYG33_10625 PF00905 Penicillin binding protein transpeptidase domain JYG33_10635 PF04085 rod shape-determining protein MreC JYG33_10645 PF02686 Glu-tRNAGln amidotransferase C subunit JYG33_10650 PF01425 Amidase JYG33_10655 PF02934 GatB/GatE catalytic domain JYG33_10655 PF02637 GatB domain JYG33_10660 PF00156 Phosphoribosyl transferase domain JYG33_10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_10665 PF03466 LysR substrate binding domain JYG33_10670 PF07681 DoxX JYG33_10675 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYG33_10690 PF07732 Multicopper oxidase JYG33_10690 PF00394 Multicopper oxidase JYG33_10695 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYG33_10700 PF00158 Sigma-54 interaction domain JYG33_10700 PF02954 Bacterial regulatory protein, Fis family JYG33_10715 PF03616 Sodium/glutamate symporter JYG33_10720 PF00348 Polyprenyl synthetase JYG33_10730 PF00293 NUDIX domain JYG33_10735 PF17284 Spermidine synthase tetramerisation domain JYG33_10740 PF02321 Outer membrane efflux protein JYG33_10745 PF00873 AcrB/AcrD/AcrF family JYG33_10750 PF00873 AcrB/AcrD/AcrF family JYG33_10755 PF13533 Biotin-lipoyl like JYG33_10760 PF07072 Cell division protein JYG33_10765 PF01121 Dephospho-CoA kinase JYG33_10775 PF00196 Bacterial regulatory proteins, luxR family JYG33_10775 PF00072 Response regulator receiver domain JYG33_10780 PF02569 Pantoate-beta-alanine ligase JYG33_10785 PF02616 Segregation and condensation protein ScpA JYG33_10795 PF07690 Major Facilitator Superfamily JYG33_10805 PF02310 B12 binding domain JYG33_10805 PF02607 B12 binding domain JYG33_10805 PF02965 Vitamin B12 dependent methionine synthase, activation domain JYG33_10805 PF00809 Pterin binding enzyme JYG33_10805 PF02574 Homocysteine S-methyltransferase JYG33_10810 PF07715 TonB-dependent Receptor Plug Domain JYG33_10810 PF00593 TonB dependent receptor JYG33_10815 PF01497 Periplasmic binding protein JYG33_10820 PF07715 TonB-dependent Receptor Plug Domain JYG33_10820 PF07660 Secretin and TonB N terminus short domain JYG33_10820 PF00593 TonB dependent receptor JYG33_10830 PF08281 Sigma-70, region 4 JYG33_10830 PF04542 Sigma-70 region 2 JYG33_10840 PF13609 Gram-negative porin JYG33_10850 PF01544 CorA-like Mg2+ transporter protein JYG33_10860 PF01544 CorA-like Mg2+ transporter protein JYG33_10880 PF05690 Thiazole biosynthesis protein ThiG JYG33_10885 PF08543 Phosphomethylpyrimidine kinase JYG33_10890 PF01048 Phosphorylase superfamily JYG33_10900 PF02321 Outer membrane efflux protein JYG33_10905 PF01467 Cytidylyltransferase-like JYG33_10915 PF03109 ABC1 family JYG33_10930 PF01209 ubiE/COQ5 methyltransferase family JYG33_10935 PF00486 Transcriptional regulatory protein, C terminal JYG33_10935 PF00072 Response regulator receiver domain JYG33_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_10940 PF00512 His Kinase A (phospho-acceptor) domain JYG33_10940 PF00989 PAS fold JYG33_10940 PF11808 Phosphate regulon sensor protein PhoR JYG33_10950 PF02682 Carboxyltransferase domain, subdomain C and D JYG33_10955 PF02626 Carboxyltransferase domain, subdomain A and B JYG33_10960 PF00585 C-terminal regulatory domain of Threonine dehydratase JYG33_10960 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_10965 PF09335 SNARE associated Golgi protein JYG33_10980 PF03797 Autotransporter beta-domain JYG33_10980 PF00082 Subtilase family JYG33_10985 PF00156 Phosphoribosyl transferase domain JYG33_10990 PF00664 ABC transporter transmembrane region JYG33_10990 PF00005 ABC transporter JYG33_10995 PF00664 ABC transporter transmembrane region JYG33_10995 PF00005 ABC transporter JYG33_11000 PF08173 Membrane bound YbgT-like protein JYG33_11005 PF02322 Cytochrome bd terminal oxidase subunit II JYG33_11010 PF01654 Cytochrome bd terminal oxidase subunit I JYG33_11020 PF00571 CBS domain JYG33_11020 PF01380 SIS domain JYG33_11040 PF00005 ABC transporter JYG33_11045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JYG33_11050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYG33_11055 PF02603 HPr Serine kinase N terminus JYG33_11055 PF07475 HPr Serine kinase C-terminal domain JYG33_11060 PF03668 P-loop ATPase protein family JYG33_11065 PF03330 Lytic transglycolase JYG33_11065 PF05036 Sporulation related domain JYG33_11070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYG33_11075 PF02021 Uncharacterised protein family UPF0102 JYG33_11080 PF13580 SIS domain JYG33_11090 PF00578 AhpC/TSA family JYG33_11095 PF00696 Amino acid kinase family JYG33_11105 PF00171 Aldehyde dehydrogenase family JYG33_11110 PF12833 Helix-turn-helix domain JYG33_11115 PF00899 ThiF family JYG33_11120 PF13180 PDZ domain JYG33_11120 PF03572 Peptidase family S41 JYG33_11125 PF01551 Peptidase family M23 JYG33_11130 PF00300 Histidine phosphatase superfamily (branch 1) JYG33_11135 PF00581 Rhodanese-like domain JYG33_11140 PF00462 Glutaredoxin JYG33_11145 PF02556 Preprotein translocase subunit SecB JYG33_11150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JYG33_11150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JYG33_11155 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_11160 PF00588 SpoU rRNA Methylase family JYG33_11165 PF00156 Phosphoribosyl transferase domain JYG33_11170 PF08241 Methyltransferase domain JYG33_11175 PF00593 TonB dependent receptor JYG33_11175 PF07715 TonB-dependent Receptor Plug Domain JYG33_11180 PF00072 Response regulator receiver domain JYG33_11180 PF00486 Transcriptional regulatory protein, C terminal JYG33_11185 PF00672 HAMP domain JYG33_11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_11185 PF00512 His Kinase A (phospho-acceptor) domain JYG33_11190 PF00885 6,7-dimethyl-8-ribityllumazine synthase JYG33_11195 PF02954 Bacterial regulatory protein, Fis family JYG33_11195 PF00072 Response regulator receiver domain JYG33_11195 PF00072 Response regulator receiver domain JYG33_11195 PF00158 Sigma-54 interaction domain JYG33_11195 PF00158 Sigma-54 interaction domain JYG33_11195 PF02954 Bacterial regulatory protein, Fis family JYG33_11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_11200 PF00672 HAMP domain JYG33_11210 PF01189 16S rRNA methyltransferase RsmB/F JYG33_11210 PF01029 NusB family JYG33_11215 PF00919 Uncharacterized protein family UPF0004 JYG33_11215 PF18693 TRAM domain JYG33_11215 PF04055 Radical SAM superfamily JYG33_11225 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_11230 PF17645 Arylmalonate decarboxylase JYG33_11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_11235 PF03466 LysR substrate binding domain JYG33_11240 PF03328 HpcH/HpaI aldolase/citrate lyase family JYG33_11250 PF00005 ABC transporter JYG33_11255 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_11275 PF01040 UbiA prenyltransferase family JYG33_11290 PF00005 ABC transporter JYG33_11305 PF02350 UDP-N-acetylglucosamine 2-epimerase JYG33_11310 PF00535 Glycosyl transferase family 2 JYG33_11320 PF02397 Bacterial sugar transferase JYG33_11325 PF04932 O-Antigen ligase JYG33_11330 PF14667 Polysaccharide biosynthesis C-terminal domain JYG33_11330 PF01943 Polysaccharide biosynthesis protein JYG33_11335 PF16363 GDP-mannose 4,6 dehydratase JYG33_11340 PF00483 Nucleotidyl transferase JYG33_11350 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JYG33_11355 PF04321 RmlD substrate binding domain JYG33_11360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JYG33_11365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYG33_11365 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYG33_11370 PF00231 ATP synthase JYG33_11375 PF00306 ATP synthase alpha/beta chain, C terminal domain JYG33_11375 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYG33_11375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYG33_11380 PF00213 ATP synthase delta (OSCP) subunit JYG33_11385 PF00430 ATP synthase B/B' CF(0) JYG33_11390 PF00137 ATP synthase subunit C JYG33_11395 PF00119 ATP synthase A chain JYG33_11405 PF00378 Enoyl-CoA hydratase/isomerase JYG33_11420 PF01171 PP-loop family JYG33_11425 PF02441 Flavoprotein JYG33_11430 PF00462 Glutaredoxin JYG33_11435 PF17827 PrmC N-terminal domain JYG33_11435 PF05175 Methyltransferase small domain JYG33_11440 PF03462 PCRF domain JYG33_11440 PF00472 RF-1 domain JYG33_11445 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JYG33_11445 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JYG33_11445 PF01488 Shikimate / quinate 5-dehydrogenase JYG33_11465 PF07660 Secretin and TonB N terminus short domain JYG33_11465 PF00593 TonB dependent receptor JYG33_11465 PF07715 TonB-dependent Receptor Plug Domain JYG33_11520 PF02472 Biopolymer transport protein ExbD/TolR JYG33_11525 PF01618 MotA/TolQ/ExbB proton channel family JYG33_11540 PF13847 Methyltransferase domain JYG33_11550 PF07715 TonB-dependent Receptor Plug Domain JYG33_11550 PF00593 TonB dependent receptor JYG33_11550 PF07660 Secretin and TonB N terminus short domain JYG33_11570 PF00474 Sodium:solute symporter family JYG33_11575 PF00795 Carbon-nitrogen hydrolase JYG33_11580 PF03466 LysR substrate binding domain JYG33_11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_11585 PF00080 Copper/zinc superoxide dismutase (SODC) JYG33_11595 PF05145 Transition state regulatory protein AbrB JYG33_11600 PF01970 Tripartite tricarboxylate transporter TctA family JYG33_11615 PF00672 HAMP domain JYG33_11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_11615 PF00512 His Kinase A (phospho-acceptor) domain JYG33_11620 PF00072 Response regulator receiver domain JYG33_11620 PF00486 Transcriptional regulatory protein, C terminal JYG33_11625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_11625 PF03466 LysR substrate binding domain JYG33_11630 PF08946 Osmosensory transporter coiled coil JYG33_11630 PF00083 Sugar (and other) transporter JYG33_11635 PF00795 Carbon-nitrogen hydrolase JYG33_11655 PF00005 ABC transporter JYG33_11685 PF13247 4Fe-4S dicluster domain JYG33_11685 PF09163 Formate dehydrogenase N, transmembrane JYG33_11690 PF01292 Prokaryotic cytochrome b561 JYG33_11695 PF04216 Protein involved in formate dehydrogenase formation JYG33_11700 PF03841 L-seryl-tRNA selenium transferase JYG33_11700 PF12390 Selenocysteine synthase N terminal JYG33_11705 PF00009 Elongation factor Tu GTP binding domain JYG33_11705 PF09107 Elongation factor SelB, winged helix JYG33_11705 PF09106 Elongation factor SelB, winged helix JYG33_11705 PF03144 Elongation factor Tu domain 2 JYG33_11715 PF01381 Helix-turn-helix JYG33_11720 PF00596 Class II Aldolase and Adducin N-terminal domain JYG33_11730 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_11735 PF00593 TonB dependent receptor JYG33_11735 PF07715 TonB-dependent Receptor Plug Domain JYG33_11740 PF07715 TonB-dependent Receptor Plug Domain JYG33_11740 PF00593 TonB dependent receptor JYG33_11750 PF00586 AIR synthase related protein, N-terminal domain JYG33_11750 PF02769 AIR synthase related protein, C-terminal domain JYG33_11760 PF12801 4Fe-4S binding domain JYG33_11760 PF04205 FMN-binding domain JYG33_11765 PF18764 Nitrous oxide reductase propeller repeat JYG33_11765 PF13473 Cupredoxin-like domain JYG33_11765 PF18793 Nitrous oxide reductase propeller repeat 2 JYG33_11770 PF05048 Periplasmic copper-binding protein (NosD) JYG33_11775 PF00005 ABC transporter JYG33_11780 PF12679 ABC-2 family transporter protein JYG33_11795 PF00342 Phosphoglucose isomerase JYG33_11815 PF00106 short chain dehydrogenase JYG33_11875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYG33_11875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYG33_11875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYG33_11880 PF02350 UDP-N-acetylglucosamine 2-epimerase JYG33_11895 PF00005 ABC transporter JYG33_11900 PF01061 ABC-2 type transporter JYG33_11905 PF02563 Polysaccharide biosynthesis/export protein JYG33_11910 PF00155 Aminotransferase class I and II JYG33_11915 PF02801 Beta-ketoacyl synthase, C-terminal domain JYG33_11915 PF16197 Ketoacyl-synthetase C-terminal extension JYG33_11915 PF00109 Beta-ketoacyl synthase, N-terminal domain JYG33_11915 PF14765 Polyketide synthase dehydratase JYG33_11915 PF00550 Phosphopantetheine attachment site JYG33_11915 PF08659 KR domain JYG33_11915 PF00698 Acyl transferase domain JYG33_11915 PF08240 Alcohol dehydrogenase GroES-like domain JYG33_11920 PF00860 Permease family JYG33_11925 PF00892 EamA-like transporter family JYG33_11930 PF00392 Bacterial regulatory proteins, gntR family JYG33_11930 PF00155 Aminotransferase class I and II JYG33_11935 PF00892 EamA-like transporter family JYG33_11950 PF02803 Thiolase, C-terminal domain JYG33_11950 PF00108 Thiolase, N-terminal domain JYG33_11955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYG33_11955 PF00378 Enoyl-CoA hydratase/isomerase JYG33_11955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYG33_11970 PF00005 ABC transporter JYG33_11975 PF02405 Permease MlaE JYG33_11980 PF02470 MlaD protein JYG33_11995 PF00005 ABC transporter JYG33_12000 PF01061 ABC-2 type transporter JYG33_12010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYG33_12015 PF01634 ATP phosphoribosyltransferase JYG33_12020 PF00815 Histidinol dehydrogenase JYG33_12025 PF00475 Imidazoleglycerol-phosphate dehydratase JYG33_12030 PF00117 Glutamine amidotransferase class-I JYG33_12035 PF00977 Histidine biosynthesis protein JYG33_12040 PF00977 Histidine biosynthesis protein JYG33_12045 PF01502 Phosphoribosyl-AMP cyclohydrolase JYG33_12050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JYG33_12055 PF01230 HIT domain JYG33_12060 PF02416 mttA/Hcf106 family JYG33_12065 PF02416 mttA/Hcf106 family JYG33_12070 PF00902 Sec-independent protein translocase protein (TatC) JYG33_12075 PF13180 PDZ domain JYG33_12080 PF01784 NIF3 (NGG1p interacting factor 3) JYG33_12085 PF01741 Large-conductance mechanosensitive channel, MscL JYG33_12090 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JYG33_12090 PF00355 Rieske [2Fe-2S] domain JYG33_12095 PF00032 Cytochrome b(C-terminal)/b6/petD JYG33_12095 PF00033 Cytochrome b/b6/petB JYG33_12100 PF02167 Cytochrome C1 family JYG33_12105 PF02798 Glutathione S-transferase, N-terminal domain JYG33_12105 PF00043 Glutathione S-transferase, C-terminal domain JYG33_12110 PF04386 Stringent starvation protein B JYG33_12115 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_12120 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_12140 PF01070 FMN-dependent dehydrogenase JYG33_12145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYG33_12145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYG33_12155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_12165 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_12170 PF01370 NAD dependent epimerase/dehydratase family JYG33_12175 PF01261 Xylose isomerase-like TIM barrel JYG33_12180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYG33_12180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYG33_12185 PF00920 Dehydratase family JYG33_12190 PF07729 FCD domain JYG33_12190 PF00392 Bacterial regulatory proteins, gntR family JYG33_12195 PF01037 Lrp/AsnC ligand binding domain JYG33_12195 PF13404 AsnC-type helix-turn-helix domain JYG33_12200 PF03301 Tryptophan 2,3-dioxygenase JYG33_12215 PF03466 LysR substrate binding domain JYG33_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_12220 PF02548 Ketopantoate hydroxymethyltransferase JYG33_12225 PF00248 Aldo/keto reductase family JYG33_12230 PF07690 Major Facilitator Superfamily JYG33_12235 PF00330 Aconitase family (aconitate hydratase) JYG33_12235 PF00694 Aconitase C-terminal domain JYG33_12240 PF00990 Diguanylate cyclase, GGDEF domain JYG33_12240 PF00072 Response regulator receiver domain JYG33_12245 PF13847 Methyltransferase domain JYG33_12255 PF00795 Carbon-nitrogen hydrolase JYG33_12270 PF07969 Amidohydrolase family JYG33_12275 PF03466 LysR substrate binding domain JYG33_12275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_12280 PF00083 Sugar (and other) transporter JYG33_12280 PF08946 Osmosensory transporter coiled coil JYG33_12290 PF05726 Pirin C-terminal cupin domain JYG33_12290 PF02678 Pirin JYG33_12295 PF00857 Isochorismatase family JYG33_12300 PF00857 Isochorismatase family JYG33_12305 PF02678 Pirin JYG33_12305 PF05726 Pirin C-terminal cupin domain JYG33_12310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_12310 PF03466 LysR substrate binding domain JYG33_12315 PF05532 CsbD-like JYG33_12320 PF04972 BON domain JYG33_12325 PF00743 Flavin-binding monooxygenase-like JYG33_12330 PF00158 Sigma-54 interaction domain JYG33_12330 PF02954 Bacterial regulatory protein, Fis family JYG33_12330 PF01590 GAF domain JYG33_12335 PF13419 Haloacid dehalogenase-like hydrolase JYG33_12340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_12340 PF03466 LysR substrate binding domain JYG33_12350 PF00465 Iron-containing alcohol dehydrogenase JYG33_12365 PF07715 TonB-dependent Receptor Plug Domain JYG33_12365 PF00593 TonB dependent receptor JYG33_12385 PF07715 TonB-dependent Receptor Plug Domain JYG33_12385 PF00593 TonB dependent receptor JYG33_12400 PF08281 Sigma-70, region 4 JYG33_12400 PF04542 Sigma-70 region 2 JYG33_12410 PF01380 SIS domain JYG33_12415 PF01037 Lrp/AsnC ligand binding domain JYG33_12425 PF12804 MobA-like NTP transferase domain JYG33_12425 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_12425 PF14602 Hexapeptide repeat of succinyl-transferase JYG33_12440 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JYG33_12440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JYG33_12445 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYG33_12455 PF00510 Cytochrome c oxidase subunit III JYG33_12475 PF02628 Cytochrome oxidase assembly protein JYG33_12480 PF01040 UbiA prenyltransferase family JYG33_12485 PF00999 Sodium/hydrogen exchanger family JYG33_12495 PF00593 TonB dependent receptor JYG33_12495 PF07715 TonB-dependent Receptor Plug Domain JYG33_12500 PF00140 Sigma-70 factor, region 1.2 JYG33_12500 PF04542 Sigma-70 region 2 JYG33_12500 PF04545 Sigma-70, region 4 JYG33_12505 PF00756 Putative esterase JYG33_12510 PF08240 Alcohol dehydrogenase GroES-like domain JYG33_12510 PF00107 Zinc-binding dehydrogenase JYG33_12515 PF13091 PLD-like domain JYG33_12520 PF03372 Endonuclease/Exonuclease/phosphatase family JYG33_12525 PF00152 tRNA synthetases class II (D, K and N) JYG33_12525 PF02938 GAD domain JYG33_12525 PF01336 OB-fold nucleic acid binding domain JYG33_12545 PF01040 UbiA prenyltransferase family JYG33_12550 PF00155 Aminotransferase class I and II JYG33_12560 PF01979 Amidohydrolase family JYG33_12565 PF01979 Amidohydrolase family JYG33_12570 PF01381 Helix-turn-helix JYG33_12570 PF00145 C-5 cytosine-specific DNA methylase JYG33_12575 PF00221 Aromatic amino acid lyase JYG33_12580 PF17392 Urocanase C-terminal domain JYG33_12580 PF17391 Urocanase N-terminal domain JYG33_12580 PF01175 Urocanase Rossmann-like domain JYG33_12585 PF00392 Bacterial regulatory proteins, gntR family JYG33_12585 PF07702 UTRA domain JYG33_12590 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JYG33_12605 PF07690 Major Facilitator Superfamily JYG33_12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_12610 PF03466 LysR substrate binding domain JYG33_12620 PF00085 Thioredoxin JYG33_12630 PF07690 Major Facilitator Superfamily JYG33_12640 PF13411 MerR HTH family regulatory protein JYG33_12645 PF07690 Major Facilitator Superfamily JYG33_12660 PF02798 Glutathione S-transferase, N-terminal domain JYG33_12660 PF00043 Glutathione S-transferase, C-terminal domain JYG33_12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_12665 PF03466 LysR substrate binding domain JYG33_12670 PF00970 Oxidoreductase FAD-binding domain JYG33_12670 PF00042 Globin JYG33_12670 PF00175 Oxidoreductase NAD-binding domain JYG33_12675 PF00355 Rieske [2Fe-2S] domain JYG33_12680 PF03466 LysR substrate binding domain JYG33_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_12685 PF00155 Aminotransferase class I and II JYG33_12690 PF13350 Tyrosine phosphatase family JYG33_12695 PF10996 Beta-Casp domain JYG33_12695 PF00753 Metallo-beta-lactamase superfamily JYG33_12695 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JYG33_12700 PF00440 Bacterial regulatory proteins, tetR family JYG33_12705 PF07690 Major Facilitator Superfamily JYG33_12710 PF00210 Ferritin-like domain JYG33_12720 PF07690 Major Facilitator Superfamily JYG33_12725 PF01042 Endoribonuclease L-PSP JYG33_12730 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_12735 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYG33_12740 PF07729 FCD domain JYG33_12740 PF00392 Bacterial regulatory proteins, gntR family JYG33_12745 PF00436 Single-strand binding protein family JYG33_12750 PF07690 Major Facilitator Superfamily JYG33_12755 PF17755 UvrA DNA-binding domain JYG33_12755 PF17760 UvrA interaction domain JYG33_12760 PF01966 HD domain JYG33_12760 PF13286 Phosphohydrolase-associated domain JYG33_12765 PF01761 3-dehydroquinate synthase JYG33_12770 PF01202 Shikimate kinase JYG33_12775 PF00905 Penicillin binding protein transpeptidase domain JYG33_12775 PF00912 Transglycosylase JYG33_12775 PF17092 Penicillin-binding protein OB-like domain JYG33_12785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JYG33_12785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JYG33_12790 PF08448 PAS fold JYG33_12790 PF00990 Diguanylate cyclase, GGDEF domain JYG33_12790 PF00563 EAL domain JYG33_12795 PF01578 Cytochrome C assembly protein JYG33_12800 PF05140 ResB-like family JYG33_12805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_12810 PF01926 50S ribosome-binding GTPase JYG33_12815 PF00490 Delta-aminolevulinic acid dehydratase JYG33_12820 PF02683 Cytochrome C biogenesis protein transmembrane region JYG33_12820 PF11412 Disulphide bond corrector protein DsbC JYG33_12825 PF03091 CutA1 divalent ion tolerance protein JYG33_12830 PF12833 Helix-turn-helix domain JYG33_12830 PF14525 AraC-binding-like domain JYG33_12840 PF00296 Luciferase-like monooxygenase JYG33_12845 PF01196 Ribosomal protein L17 JYG33_12850 PF01000 RNA polymerase Rpb3/RpoA insert domain JYG33_12850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JYG33_12850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JYG33_12855 PF00163 Ribosomal protein S4/S9 N-terminal domain JYG33_12855 PF01479 S4 domain JYG33_12860 PF00411 Ribosomal protein S11 JYG33_12865 PF00416 Ribosomal protein S13/S18 JYG33_12870 PF00444 Ribosomal protein L36 JYG33_12875 PF01176 Translation initiation factor 1A / IF-1 JYG33_12880 PF00344 SecY translocase JYG33_12885 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JYG33_12890 PF00327 Ribosomal protein L30p/L7e JYG33_12895 PF03719 Ribosomal protein S5, C-terminal domain JYG33_12895 PF00333 Ribosomal protein S5, N-terminal domain JYG33_12900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JYG33_12905 PF00347 Ribosomal protein L6 JYG33_12910 PF00410 Ribosomal protein S8 JYG33_12915 PF00253 Ribosomal protein S14p/S29e JYG33_12920 PF00281 Ribosomal protein L5 JYG33_12920 PF00673 ribosomal L5P family C-terminus JYG33_12925 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JYG33_12930 PF00238 Ribosomal protein L14p/L23e JYG33_12955 PF00529 HlyD membrane-fusion protein of T1SS JYG33_12960 PF03412 Peptidase C39 family JYG33_12960 PF00664 ABC transporter transmembrane region JYG33_12960 PF00005 ABC transporter JYG33_12970 PF02321 Outer membrane efflux protein JYG33_12975 PF00171 Aldehyde dehydrogenase family JYG33_12985 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_12985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_12985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYG33_12985 PF09317 Domain of unknown function (DUF1974) JYG33_12990 PF02803 Thiolase, C-terminal domain JYG33_12990 PF00108 Thiolase, N-terminal domain JYG33_12995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYG33_12995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYG33_12995 PF00378 Enoyl-CoA hydratase/isomerase JYG33_13000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JYG33_13015 PF13193 AMP-binding enzyme C-terminal domain JYG33_13015 PF00501 AMP-binding enzyme JYG33_13020 PF00258 Flavodoxin JYG33_13020 PF00175 Oxidoreductase NAD-binding domain JYG33_13020 PF00667 FAD binding domain JYG33_13025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYG33_13025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYG33_13030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYG33_13030 PF10414 Sirohaem synthase dimerisation region JYG33_13030 PF14824 Sirohaem biosynthesis protein central JYG33_13035 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_13045 PF00005 ABC transporter JYG33_13060 PF12852 Cupin JYG33_13060 PF12833 Helix-turn-helix domain JYG33_13065 PF00366 Ribosomal protein S17 JYG33_13070 PF00831 Ribosomal L29 protein JYG33_13075 PF00252 Ribosomal protein L16p/L10e JYG33_13080 PF07650 KH domain JYG33_13080 PF00189 Ribosomal protein S3, C-terminal domain JYG33_13085 PF00237 Ribosomal protein L22p/L17e JYG33_13090 PF00203 Ribosomal protein S19 JYG33_13095 PF00181 Ribosomal Proteins L2, RNA binding domain JYG33_13095 PF03947 Ribosomal Proteins L2, C-terminal domain JYG33_13100 PF00276 Ribosomal protein L23 JYG33_13105 PF00573 Ribosomal protein L4/L1 family JYG33_13110 PF00297 Ribosomal protein L3 JYG33_13115 PF00005 ABC transporter JYG33_13115 PF00571 CBS domain JYG33_13120 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_13125 PF00338 Ribosomal protein S10p/S20e JYG33_13130 PF03144 Elongation factor Tu domain 2 JYG33_13130 PF00009 Elongation factor Tu GTP binding domain JYG33_13130 PF03143 Elongation factor Tu C-terminal domain JYG33_13135 PF00679 Elongation factor G C-terminus JYG33_13135 PF14492 Elongation Factor G, domain II JYG33_13135 PF03764 Elongation factor G, domain IV JYG33_13135 PF00009 Elongation factor Tu GTP binding domain JYG33_13135 PF03144 Elongation factor Tu domain 2 JYG33_13140 PF00177 Ribosomal protein S7p/S5e JYG33_13145 PF00164 Ribosomal protein S12/S23 JYG33_13150 PF00072 Response regulator receiver domain JYG33_13150 PF00486 Transcriptional regulatory protein, C terminal JYG33_13160 PF00512 His Kinase A (phospho-acceptor) domain JYG33_13160 PF00672 HAMP domain JYG33_13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_13175 PF00127 Copper binding proteins, plastocyanin/azurin family JYG33_13180 PF05000 RNA polymerase Rpb1, domain 4 JYG33_13180 PF04997 RNA polymerase Rpb1, domain 1 JYG33_13180 PF00623 RNA polymerase Rpb1, domain 2 JYG33_13180 PF04983 RNA polymerase Rpb1, domain 3 JYG33_13180 PF04998 RNA polymerase Rpb1, domain 5 JYG33_13185 PF04560 RNA polymerase Rpb2, domain 7 JYG33_13185 PF00562 RNA polymerase Rpb2, domain 6 JYG33_13185 PF10385 RNA polymerase beta subunit external 1 domain JYG33_13185 PF04563 RNA polymerase beta subunit JYG33_13185 PF04561 RNA polymerase Rpb2, domain 2 JYG33_13185 PF04565 RNA polymerase Rpb2, domain 3 JYG33_13190 PF00542 Ribosomal protein L7/L12 C-terminal domain JYG33_13190 PF16320 Ribosomal protein L7/L12 dimerisation domain JYG33_13195 PF00466 Ribosomal protein L10 JYG33_13200 PF00687 Ribosomal protein L1p/L10e family JYG33_13205 PF00298 Ribosomal protein L11, RNA binding domain JYG33_13205 PF03946 Ribosomal protein L11, N-terminal domain JYG33_13210 PF02357 Transcription termination factor nusG JYG33_13210 PF00467 KOW motif JYG33_13225 PF00009 Elongation factor Tu GTP binding domain JYG33_13225 PF03143 Elongation factor Tu C-terminal domain JYG33_13225 PF03144 Elongation factor Tu domain 2 JYG33_13245 PF17762 HTH domain found in ParB protein JYG33_13245 PF02195 ParB-like nuclease domain JYG33_13250 PF13614 AAA domain JYG33_13255 PF02527 rRNA small subunit methyltransferase G JYG33_13260 PF01134 Glucose inhibited division protein A JYG33_13260 PF13932 GidA associated domain JYG33_13265 PF00155 Aminotransferase class I and II JYG33_13270 PF00149 Calcineurin-like phosphoesterase JYG33_13275 PF00990 Diguanylate cyclase, GGDEF domain JYG33_13280 PF02666 Phosphatidylserine decarboxylase JYG33_13290 PF13291 ACT domain JYG33_13290 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_13300 PF02567 Phenazine biosynthesis-like protein JYG33_13335 PF01926 50S ribosome-binding GTPase JYG33_13335 PF12631 MnmE helical domain JYG33_13335 PF10396 GTP-binding protein TrmE N-terminus JYG33_13340 PF07883 Cupin domain JYG33_13340 PF01381 Helix-turn-helix JYG33_13345 PF07687 Peptidase dimerisation domain JYG33_13345 PF01546 Peptidase family M20/M25/M40 JYG33_13350 PF00291 Pyridoxal-phosphate dependent enzyme JYG33_13355 PF02423 Ornithine cyclodeaminase/mu-crystallin family JYG33_13365 PF13458 Periplasmic binding protein JYG33_13370 PF02653 Branched-chain amino acid transport system / permease component JYG33_13380 PF00005 ABC transporter JYG33_13380 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_13385 PF00005 ABC transporter JYG33_13390 PF00561 alpha/beta hydrolase fold JYG33_13400 PF00857 Isochorismatase family JYG33_13405 PF01494 FAD binding domain JYG33_13435 PF00199 Catalase JYG33_13435 PF06628 Catalase-related immune-responsive JYG33_13440 PF00486 Transcriptional regulatory protein, C terminal JYG33_13440 PF00072 Response regulator receiver domain JYG33_13445 PF00672 HAMP domain JYG33_13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_13445 PF00512 His Kinase A (phospho-acceptor) domain JYG33_13460 PF00005 ABC transporter JYG33_13460 PF02687 FtsX-like permease family JYG33_13460 PF12704 MacB-like periplasmic core domain JYG33_13500 PF00202 Aminotransferase class-III JYG33_13505 PF02096 60Kd inner membrane protein JYG33_13505 PF14849 YidC periplasmic domain JYG33_13510 PF01809 Putative membrane protein insertion efficiency factor JYG33_13515 PF00825 Ribonuclease P JYG33_13520 PF00468 Ribosomal protein L34 JYG33_13525 PF00308 Bacterial dnaA protein JYG33_13525 PF08299 Bacterial dnaA protein helix-turn-helix JYG33_13525 PF11638 DnaA N-terminal domain JYG33_13530 PF00712 DNA polymerase III beta subunit, N-terminal domain JYG33_13530 PF02767 DNA polymerase III beta subunit, central domain JYG33_13530 PF02768 DNA polymerase III beta subunit, C-terminal domain JYG33_13535 PF01751 Toprim domain JYG33_13535 PF00204 DNA gyrase B JYG33_13535 PF00986 DNA gyrase B subunit, carboxyl terminus JYG33_13535 PF18053 DNA gyrase B subunit insert domain JYG33_13535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_13540 PF01479 S4 domain JYG33_13540 PF00849 RNA pseudouridylate synthase JYG33_13555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_13580 PF13609 Gram-negative porin JYG33_13585 PF00701 Dihydrodipicolinate synthetase family JYG33_13605 PF01266 FAD dependent oxidoreductase JYG33_13615 PF04324 BFD-like [2Fe-2S] binding domain JYG33_13615 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_13620 PF00392 Bacterial regulatory proteins, gntR family JYG33_13620 PF07729 FCD domain JYG33_13625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_13635 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_13640 PF00355 Rieske [2Fe-2S] domain JYG33_13645 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JYG33_13645 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JYG33_13650 PF03466 LysR substrate binding domain JYG33_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_13660 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_13665 PF07729 FCD domain JYG33_13665 PF00392 Bacterial regulatory proteins, gntR family JYG33_13670 PF13609 Gram-negative porin JYG33_13675 PF07690 Major Facilitator Superfamily JYG33_13680 PF07687 Peptidase dimerisation domain JYG33_13680 PF01546 Peptidase family M20/M25/M40 JYG33_13685 PF00155 Aminotransferase class I and II JYG33_13695 PF02653 Branched-chain amino acid transport system / permease component JYG33_13700 PF11862 Domain of unknown function (DUF3382) JYG33_13700 PF02653 Branched-chain amino acid transport system / permease component JYG33_13705 PF00005 ABC transporter JYG33_13710 PF00501 AMP-binding enzyme JYG33_13710 PF13193 AMP-binding enzyme C-terminal domain JYG33_13720 PF00561 alpha/beta hydrolase fold JYG33_13720 PF00364 Biotin-requiring enzyme JYG33_13725 PF00155 Aminotransferase class I and II JYG33_13725 PF00392 Bacterial regulatory proteins, gntR family JYG33_13730 PF00378 Enoyl-CoA hydratase/isomerase JYG33_13735 PF17645 Arylmalonate decarboxylase JYG33_13740 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_13750 PF00892 EamA-like transporter family JYG33_13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_13755 PF03466 LysR substrate binding domain JYG33_13765 PF00005 ABC transporter JYG33_13765 PF08402 TOBE domain JYG33_13775 PF00155 Aminotransferase class I and II JYG33_13785 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYG33_13785 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYG33_13790 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_13815 PF00884 Sulfatase JYG33_13815 PF16347 Domain of unknown function (DUF4976) JYG33_13825 PF01047 MarR family JYG33_13840 PF12802 MarR family JYG33_13850 PF01494 FAD binding domain JYG33_13855 PF07883 Cupin domain JYG33_13860 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYG33_13865 PF00795 Carbon-nitrogen hydrolase JYG33_13870 PF04199 Putative cyclase JYG33_13875 PF00175 Oxidoreductase NAD-binding domain JYG33_13875 PF00970 Oxidoreductase FAD-binding domain JYG33_13875 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_13880 PF00355 Rieske [2Fe-2S] domain JYG33_13880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYG33_13885 PF00866 Ring hydroxylating beta subunit JYG33_13890 PF13193 AMP-binding enzyme C-terminal domain JYG33_13890 PF00501 AMP-binding enzyme JYG33_13915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_13925 PF01243 Pyridoxamine 5'-phosphate oxidase JYG33_13925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JYG33_13950 PF01613 Flavin reductase like domain JYG33_13960 PF14525 AraC-binding-like domain JYG33_13960 PF12833 Helix-turn-helix domain JYG33_13970 PF00005 ABC transporter JYG33_13975 PF02261 Aspartate decarboxylase JYG33_13980 PF07715 TonB-dependent Receptor Plug Domain JYG33_13980 PF00593 TonB dependent receptor JYG33_13985 PF04773 FecR protein JYG33_13985 PF16220 Domain of unknown function (DUF4880) JYG33_13990 PF04542 Sigma-70 region 2 JYG33_13990 PF08281 Sigma-70, region 4 JYG33_13995 PF00005 ABC transporter JYG33_13995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYG33_14000 PF00005 ABC transporter JYG33_14000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYG33_14005 PF12911 N-terminal TM domain of oligopeptide transport permease C JYG33_14005 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_14010 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_14015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYG33_14020 PF00817 impB/mucB/samB family JYG33_14020 PF11799 impB/mucB/samB family C-terminal domain JYG33_14025 PF08281 Sigma-70, region 4 JYG33_14025 PF04542 Sigma-70 region 2 JYG33_14030 PF04773 FecR protein JYG33_14030 PF16220 Domain of unknown function (DUF4880) JYG33_14035 PF07715 TonB-dependent Receptor Plug Domain JYG33_14035 PF00593 TonB dependent receptor JYG33_14040 PF00144 Beta-lactamase JYG33_14040 PF11954 Domain of unknown function (DUF3471) JYG33_14045 PF00202 Aminotransferase class-III JYG33_14050 PF03180 NLPA lipoprotein JYG33_14055 PF03180 NLPA lipoprotein JYG33_14060 PF00005 ABC transporter JYG33_14060 PF09383 NIL domain JYG33_14065 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_14070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JYG33_14070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_14075 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JYG33_14075 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_14075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_14080 PF03180 NLPA lipoprotein JYG33_14085 PF00296 Luciferase-like monooxygenase JYG33_14090 PF03180 NLPA lipoprotein JYG33_14105 PF00296 Luciferase-like monooxygenase JYG33_14110 PF03358 NADPH-dependent FMN reductase JYG33_14120 PF12833 Helix-turn-helix domain JYG33_14120 PF14525 AraC-binding-like domain JYG33_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_14130 PF03466 LysR substrate binding domain JYG33_14135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JYG33_14135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JYG33_14140 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_14155 PF01274 Malate synthase JYG33_14160 PF01048 Phosphorylase superfamily JYG33_14160 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JYG33_14170 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_14175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_14180 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JYG33_14190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYG33_14190 PF00205 Thiamine pyrophosphate enzyme, central domain JYG33_14190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYG33_14195 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_14205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_14215 PF01131 DNA topoisomerase JYG33_14215 PF01751 Toprim domain JYG33_14225 PF04361 Protein of unknown function (DUF494) JYG33_14230 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYG33_14235 PF00364 Biotin-requiring enzyme JYG33_14235 PF00289 Biotin carboxylase, N-terminal domain JYG33_14235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYG33_14235 PF02785 Biotin carboxylase C-terminal domain JYG33_14240 PF01039 Carboxyl transferase domain JYG33_14245 PF02803 Thiolase, C-terminal domain JYG33_14245 PF00108 Thiolase, N-terminal domain JYG33_14250 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JYG33_14255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_14255 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_14255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYG33_14260 PF09278 MerR, DNA binding JYG33_14260 PF00376 MerR family regulatory protein JYG33_14270 PF01053 Cys/Met metabolism PLP-dependent enzyme JYG33_14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_14275 PF03466 LysR substrate binding domain JYG33_14280 PF07690 Major Facilitator Superfamily JYG33_14285 PF01323 DSBA-like thioredoxin domain JYG33_14285 PF00085 Thioredoxin JYG33_14295 PF03485 Arginyl tRNA synthetase N terminal domain JYG33_14295 PF05746 DALR anticodon binding domain JYG33_14295 PF00750 tRNA synthetases class I (R) JYG33_14320 PF00682 HMGL-like JYG33_14320 PF08502 LeuA allosteric (dimerisation) domain JYG33_14335 PF04963 Sigma-54 factor, core binding domain JYG33_14335 PF04552 Sigma-54, DNA binding domain JYG33_14335 PF00309 Sigma-54 factor, Activator interacting domain (AID) JYG33_14340 PF00593 TonB dependent receptor JYG33_14340 PF07715 TonB-dependent Receptor Plug Domain JYG33_14345 PF00694 Aconitase C-terminal domain JYG33_14350 PF00330 Aconitase family (aconitate hydratase) JYG33_14355 PF00682 HMGL-like JYG33_14360 PF02515 CoA-transferase family III JYG33_14365 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JYG33_14365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_14375 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_14380 PF00857 Isochorismatase family JYG33_14385 PF03466 LysR substrate binding domain JYG33_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_14395 PF00210 Ferritin-like domain JYG33_14405 PF16658 Class II release factor RF3, C-terminal domain JYG33_14405 PF03144 Elongation factor Tu domain 2 JYG33_14405 PF00009 Elongation factor Tu GTP binding domain JYG33_14410 PF01810 LysE type translocator JYG33_14415 PF00271 Helicase conserved C-terminal domain JYG33_14415 PF00270 DEAD/DEAH box helicase JYG33_14425 PF04536 TPM domain JYG33_14440 PF10396 GTP-binding protein TrmE N-terminus JYG33_14440 PF01926 50S ribosome-binding GTPase JYG33_14440 PF12631 MnmE helical domain JYG33_14455 PF01425 Amidase JYG33_14460 PF03466 LysR substrate binding domain JYG33_14460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_14470 PF03466 LysR substrate binding domain JYG33_14490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_14500 PF02405 Permease MlaE JYG33_14505 PF00005 ABC transporter JYG33_14510 PF03886 ABC-type transport auxiliary lipoprotein component JYG33_14510 PF02470 MlaD protein JYG33_14525 PF13419 Haloacid dehalogenase-like hydrolase JYG33_14530 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_14540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_14555 PF00501 AMP-binding enzyme JYG33_14555 PF13193 AMP-binding enzyme C-terminal domain JYG33_14560 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_14565 PF00392 Bacterial regulatory proteins, gntR family JYG33_14565 PF07729 FCD domain JYG33_14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_14570 PF03466 LysR substrate binding domain JYG33_14575 PF01266 FAD dependent oxidoreductase JYG33_14585 PF02646 RmuC family JYG33_14590 PF00563 EAL domain JYG33_14590 PF00990 Diguanylate cyclase, GGDEF domain JYG33_14590 PF03707 Bacterial signalling protein N terminal repeat JYG33_14595 PF00708 Acylphosphatase JYG33_14605 PF16868 NMT1-like family JYG33_14615 PF00849 RNA pseudouridylate synthase JYG33_14620 PF00710 Asparaginase, N-terminal JYG33_14620 PF17763 Glutaminase/Asparaginase C-terminal domain JYG33_14625 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_14630 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_14635 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_14640 PF00005 ABC transporter JYG33_14645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYG33_14645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYG33_14650 PF01168 Alanine racemase, N-terminal domain JYG33_14655 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_14665 PF00501 AMP-binding enzyme JYG33_14670 PF00005 ABC transporter JYG33_14670 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_14675 PF02653 Branched-chain amino acid transport system / permease component JYG33_14690 PF00005 ABC transporter JYG33_14700 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_14710 PF00682 HMGL-like JYG33_14715 PF02481 DNA recombination-mediator protein A JYG33_14715 PF17782 DprA winged helix domain JYG33_14720 PF01327 Polypeptide deformylase JYG33_14725 PF02911 Formyl transferase, C-terminal domain JYG33_14725 PF00551 Formyl transferase JYG33_14730 PF00892 EamA-like transporter family JYG33_14735 PF01425 Amidase JYG33_14745 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_14760 PF07286 Protein of unknown function (DUF1445) JYG33_14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_14765 PF03466 LysR substrate binding domain JYG33_14770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYG33_14775 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JYG33_14775 PF00534 Glycosyl transferases group 1 JYG33_14780 PF00313 'Cold-shock' DNA-binding domain JYG33_14785 PF00483 Nucleotidyl transferase JYG33_14795 PF03309 Type III pantothenate kinase JYG33_14800 PF02237 Biotin protein ligase C terminal domain JYG33_14800 PF03099 Biotin/lipoate A/B protein ligase family JYG33_14810 PF00768 D-alanyl-D-alanine carboxypeptidase JYG33_14810 PF07943 Penicillin-binding protein 5, C-terminal domain JYG33_14815 PF01063 Amino-transferase class IV JYG33_14820 PF04359 Protein of unknown function (DUF493) JYG33_14825 PF03099 Biotin/lipoate A/B protein ligase family JYG33_14840 PF00593 TonB dependent receptor JYG33_14840 PF07660 Secretin and TonB N terminus short domain JYG33_14840 PF07715 TonB-dependent Receptor Plug Domain JYG33_14845 PF00378 Enoyl-CoA hydratase/isomerase JYG33_14850 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JYG33_14850 PF04055 Radical SAM superfamily JYG33_14860 PF03167 Uracil DNA glycosylase superfamily JYG33_14905 PF01136 Peptidase family U32 JYG33_14915 PF02036 SCP-2 sterol transfer family JYG33_14940 PF00218 Indole-3-glycerol phosphate synthase JYG33_14945 PF02885 Glycosyl transferase family, helical bundle domain JYG33_14945 PF00591 Glycosyl transferase family, a/b domain JYG33_14950 PF00117 Glutamine amidotransferase class-I JYG33_14955 PF04715 Anthranilate synthase component I, N terminal region JYG33_14955 PF00425 chorismate binding enzyme JYG33_14960 PF13419 Haloacid dehalogenase-like hydrolase JYG33_14970 PF00834 Ribulose-phosphate 3 epimerase family JYG33_14975 PF04379 ApaG domain JYG33_14980 PF03562 MltA specific insert domain JYG33_14980 PF06725 3D domain JYG33_14985 PF01494 FAD binding domain JYG33_14990 PF13098 Thioredoxin-like domain JYG33_14990 PF10411 Disulfide bond isomerase protein N-terminus JYG33_15000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYG33_15000 PF00672 HAMP domain JYG33_15000 PF17200 Single Cache domain 2 JYG33_15010 PF00106 short chain dehydrogenase JYG33_15015 PF00857 Isochorismatase family JYG33_15015 PF00550 Phosphopantetheine attachment site JYG33_15020 PF00425 chorismate binding enzyme JYG33_15030 PF05977 Transmembrane secretion effector JYG33_15035 PF00501 AMP-binding enzyme JYG33_15035 PF00668 Condensation domain JYG33_15035 PF00550 Phosphopantetheine attachment site JYG33_15035 PF00975 Thioesterase domain JYG33_15040 PF00550 Phosphopantetheine attachment site JYG33_15040 PF00857 Isochorismatase family JYG33_15045 PF00501 AMP-binding enzyme JYG33_15045 PF13193 AMP-binding enzyme C-terminal domain JYG33_15055 PF00005 ABC transporter JYG33_15060 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_15060 PF00005 ABC transporter JYG33_15075 PF13458 Periplasmic binding protein JYG33_15090 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_15095 PF00005 ABC transporter JYG33_15105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYG33_15105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYG33_15125 PF00005 ABC transporter JYG33_15130 PF01032 FecCD transport family JYG33_15135 PF00756 Putative esterase JYG33_15140 PF00270 DEAD/DEAH box helicase JYG33_15140 PF00271 Helicase conserved C-terminal domain JYG33_15145 PF07690 Major Facilitator Superfamily JYG33_15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_15155 PF03466 LysR substrate binding domain JYG33_15165 PF03741 Integral membrane protein TerC family JYG33_15165 PF03471 Transporter associated domain JYG33_15175 PF02678 Pirin JYG33_15175 PF05726 Pirin C-terminal cupin domain JYG33_15190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYG33_15190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYG33_15205 PF00171 Aldehyde dehydrogenase family JYG33_15210 PF00120 Glutamine synthetase, catalytic domain JYG33_15210 PF03951 Glutamine synthetase, beta-Grasp domain JYG33_15215 PF00732 GMC oxidoreductase JYG33_15215 PF05199 GMC oxidoreductase JYG33_15230 PF01063 Amino-transferase class IV JYG33_15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_15235 PF03466 LysR substrate binding domain JYG33_15245 PF04235 Protein of unknown function (DUF418) JYG33_15255 PF00005 ABC transporter JYG33_15255 PF00664 ABC transporter transmembrane region JYG33_15260 PF04229 GrpB protein JYG33_15265 PF13673 Acetyltransferase (GNAT) domain JYG33_15270 PF01636 Phosphotransferase enzyme family JYG33_15290 PF01613 Flavin reductase like domain JYG33_15295 PF01546 Peptidase family M20/M25/M40 JYG33_15300 PF01979 Amidohydrolase family JYG33_15305 PF01979 Amidohydrolase family JYG33_15310 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_15315 PF00005 ABC transporter JYG33_15325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_15325 PF03466 LysR substrate binding domain JYG33_15330 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_15335 PF00005 ABC transporter JYG33_15340 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_15345 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_15350 PF00701 Dihydrodipicolinate synthetase family JYG33_15355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYG33_15355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYG33_15360 PF00171 Aldehyde dehydrogenase family JYG33_15370 PF06433 Methylamine dehydrogenase heavy chain (MADH) JYG33_15380 PF00578 AhpC/TSA family JYG33_15385 PF02975 Methylamine dehydrogenase, L chain JYG33_15395 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JYG33_15395 PF12833 Helix-turn-helix domain JYG33_15405 PF01208 Uroporphyrinogen decarboxylase (URO-D) JYG33_15410 PF00270 DEAD/DEAH box helicase JYG33_15410 PF00271 Helicase conserved C-terminal domain JYG33_15410 PF17764 3′ DNA-binding domain (3′BD) JYG33_15410 PF18074 Primosomal protein N C-terminal domain JYG33_15410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JYG33_15415 PF00580 UvrD/REP helicase N-terminal domain JYG33_15415 PF13361 UvrD-like helicase C-terminal domain JYG33_15425 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYG33_15425 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JYG33_15430 PF01645 Conserved region in glutamate synthase JYG33_15430 PF01493 GXGXG motif JYG33_15430 PF04898 Glutamate synthase central domain JYG33_15430 PF00310 Glutamine amidotransferases class-II JYG33_15435 PF00378 Enoyl-CoA hydratase/isomerase JYG33_15445 PF02515 CoA-transferase family III JYG33_15450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYG33_15450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYG33_15450 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JYG33_15455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_15470 PF00593 TonB dependent receptor JYG33_15470 PF07715 TonB-dependent Receptor Plug Domain JYG33_15480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYG33_15480 PF12833 Helix-turn-helix domain JYG33_15480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYG33_15480 PF02805 Metal binding domain of Ada JYG33_15485 PF04262 Glutamate-cysteine ligase JYG33_15495 PF03472 Autoinducer binding domain JYG33_15495 PF00196 Bacterial regulatory proteins, luxR family JYG33_15500 PF00561 alpha/beta hydrolase fold JYG33_15510 PF07690 Major Facilitator Superfamily JYG33_15515 PF03458 UPF0126 domain JYG33_15520 PF04172 LrgB-like family JYG33_15530 PF01042 Endoribonuclease L-PSP JYG33_15535 PF01042 Endoribonuclease L-PSP JYG33_15550 PF05662 Coiled stalk of trimeric autotransporter adhesin JYG33_15550 PF03895 YadA-like membrane anchor domain JYG33_15550 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin JYG33_15550 PF13018 Extended Signal Peptide of Type V secretion system JYG33_15560 PF00072 Response regulator receiver domain JYG33_15560 PF00486 Transcriptional regulatory protein, C terminal JYG33_15570 PF01810 LysE type translocator JYG33_15580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYG33_15580 PF02272 DHHA1 domain JYG33_15580 PF01411 tRNA synthetases class II (A) JYG33_15585 PF03466 LysR substrate binding domain JYG33_15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_15595 PF00202 Aminotransferase class-III JYG33_15610 PF01923 Cobalamin adenosyltransferase JYG33_15625 PF00004 ATPase family associated with various cellular activities (AAA) JYG33_15625 PF07724 AAA domain (Cdc48 subfamily) JYG33_15630 PF00227 Proteasome subunit JYG33_15635 PF01258 Prokaryotic dksA/traR C4-type zinc finger JYG33_15640 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYG33_15640 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYG33_15645 PF01475 Ferric uptake regulator family JYG33_15655 PF00005 ABC transporter JYG33_15660 PF00950 ABC 3 transport family JYG33_15665 PF01297 Zinc-uptake complex component A periplasmic JYG33_15670 PF02899 Phage integrase, N-terminal SAM-like domain JYG33_15670 PF00589 Phage integrase family JYG33_15680 PF01678 Diaminopimelate epimerase JYG33_15685 PF03279 Bacterial lipid A biosynthesis acyltransferase JYG33_15695 PF02773 S-adenosylmethionine synthetase, C-terminal domain JYG33_15695 PF02772 S-adenosylmethionine synthetase, central domain JYG33_15695 PF00438 S-adenosylmethionine synthetase, N-terminal domain JYG33_15700 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JYG33_15700 PF05221 S-adenosyl-L-homocysteine hydrolase JYG33_15705 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JYG33_15710 PF02219 Methylenetetrahydrofolate reductase JYG33_15720 PF01464 Transglycosylase SLT domain JYG33_15720 PF14718 Soluble lytic murein transglycosylase L domain JYG33_15725 PF01743 Poly A polymerase head domain JYG33_15725 PF12627 Probable RNA and SrmB- binding site of polymerase A JYG33_15740 PF01795 MraW methylase family JYG33_15745 PF01925 Sulfite exporter TauE/SafE JYG33_15750 PF00311 Phosphoenolpyruvate carboxylase JYG33_15755 PF00920 Dehydratase family JYG33_15765 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_15775 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JYG33_15775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_15780 PF01425 Amidase JYG33_15790 PF02540 NAD synthase JYG33_15795 PF01594 AI-2E family transporter JYG33_15805 PF00589 Phage integrase family JYG33_15820 PF07996 Type IV secretion system proteins JYG33_15880 PF00248 Aldo/keto reductase family JYG33_15885 PF07690 Major Facilitator Superfamily JYG33_15890 PF03466 LysR substrate binding domain JYG33_15890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_15900 PF13350 Tyrosine phosphatase family JYG33_15905 PF16347 Domain of unknown function (DUF4976) JYG33_15905 PF00884 Sulfatase JYG33_15915 PF01047 MarR family JYG33_15920 PF02321 Outer membrane efflux protein JYG33_15925 PF00873 AcrB/AcrD/AcrF family JYG33_15930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYG33_15935 PF00175 Oxidoreductase NAD-binding domain JYG33_15935 PF00970 Oxidoreductase FAD-binding domain JYG33_15935 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_15940 PF00376 MerR family regulatory protein JYG33_15940 PF09278 MerR, DNA binding JYG33_15950 PF07715 TonB-dependent Receptor Plug Domain JYG33_15950 PF00593 TonB dependent receptor JYG33_15955 PF01497 Periplasmic binding protein JYG33_15960 PF00005 ABC transporter JYG33_15965 PF01032 FecCD transport family JYG33_15970 PF01032 FecCD transport family JYG33_15975 PF00005 ABC transporter JYG33_15980 PF00005 ABC transporter JYG33_15980 PF08021 Siderophore-interacting FAD-binding domain JYG33_15980 PF04954 Siderophore-interacting protein JYG33_15980 PF00664 ABC transporter transmembrane region JYG33_15985 PF01565 FAD binding domain JYG33_15985 PF09330 D-lactate dehydrogenase, membrane binding JYG33_15990 PF01070 FMN-dependent dehydrogenase JYG33_15995 PF00392 Bacterial regulatory proteins, gntR family JYG33_15995 PF07729 FCD domain JYG33_16000 PF02652 L-lactate permease JYG33_16015 PF00005 ABC transporter JYG33_16020 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_16030 PF07702 UTRA domain JYG33_16030 PF00392 Bacterial regulatory proteins, gntR family JYG33_16035 PF01037 Lrp/AsnC ligand binding domain JYG33_16040 PF00266 Aminotransferase class-V JYG33_16045 PF00324 Amino acid permease JYG33_16060 PF00578 AhpC/TSA family JYG33_16070 PF00455 DeoR C terminal sensor domain JYG33_16070 PF08220 DeoR-like helix-turn-helix domain JYG33_16075 PF08402 TOBE domain JYG33_16075 PF00005 ABC transporter JYG33_16080 PF13416 Bacterial extracellular solute-binding protein JYG33_16085 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_16090 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_16100 PF07715 TonB-dependent Receptor Plug Domain JYG33_16100 PF07660 Secretin and TonB N terminus short domain JYG33_16100 PF00593 TonB dependent receptor JYG33_16115 PF03741 Integral membrane protein TerC family JYG33_16120 PF05698 Bacterial trigger factor protein (TF) C-terminus JYG33_16130 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JYG33_16140 PF01966 HD domain JYG33_16145 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_16150 PF13378 Enolase C-terminal domain-like JYG33_16150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYG33_16155 PF01479 S4 domain JYG33_16160 PF07690 Major Facilitator Superfamily JYG33_16165 PF00440 Bacterial regulatory proteins, tetR family JYG33_16175 PF01425 Amidase JYG33_16180 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_16185 PF03466 LysR substrate binding domain JYG33_16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_16210 PF00183 Hsp90 protein JYG33_16215 PF07715 TonB-dependent Receptor Plug Domain JYG33_16215 PF00593 TonB dependent receptor JYG33_16220 PF18331 PKHD-type hydroxylase C-terminal domain JYG33_16220 PF13640 2OG-Fe(II) oxygenase superfamily JYG33_16225 PF01070 FMN-dependent dehydrogenase JYG33_16230 PF01510 N-acetylmuramoyl-L-alanine amidase JYG33_16245 PF02881 SRP54-type protein, helical bundle domain JYG33_16245 PF00448 SRP54-type protein, GTPase domain JYG33_16245 PF02978 Signal peptide binding domain JYG33_16250 PF04972 BON domain JYG33_16250 PF01476 LysM domain JYG33_16255 PF02597 ThiS family JYG33_16255 PF05690 Thiazole biosynthesis protein ThiG JYG33_16260 PF00561 alpha/beta hydrolase fold JYG33_16265 PF02390 Putative methyltransferase JYG33_16295 PF00857 Isochorismatase family JYG33_16300 PF12833 Helix-turn-helix domain JYG33_16300 PF14525 AraC-binding-like domain JYG33_16310 PF07715 TonB-dependent Receptor Plug Domain JYG33_16310 PF00593 TonB dependent receptor JYG33_16310 PF07660 Secretin and TonB N terminus short domain JYG33_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_16340 PF03466 LysR substrate binding domain JYG33_16345 PF01699 Sodium/calcium exchanger protein JYG33_16350 PF00990 Diguanylate cyclase, GGDEF domain JYG33_16350 PF00072 Response regulator receiver domain JYG33_16355 PF01323 DSBA-like thioredoxin domain JYG33_16360 PF07690 Major Facilitator Superfamily JYG33_16360 PF00083 Sugar (and other) transporter JYG33_16365 PF00596 Class II Aldolase and Adducin N-terminal domain JYG33_16380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYG33_16385 PF05899 Protein of unknown function (DUF861) JYG33_16385 PF07883 Cupin domain JYG33_16390 PF03466 LysR substrate binding domain JYG33_16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_16395 PF01545 Cation efflux family JYG33_16395 PF16916 Dimerisation domain of Zinc Transporter JYG33_16400 PF09334 tRNA synthetases class I (M) JYG33_16400 PF01588 Putative tRNA binding domain JYG33_16410 PF10609 NUBPL iron-transfer P-loop NTPase JYG33_16425 PF00692 dUTPase JYG33_16430 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JYG33_16430 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JYG33_16430 PF01276 Orn/Lys/Arg decarboxylase, major domain JYG33_16440 PF01597 Glycine cleavage H-protein JYG33_16445 PF00186 Dihydrofolate reductase JYG33_16450 PF00303 Thymidylate synthase JYG33_16455 PF02566 OsmC-like protein JYG33_16460 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYG33_16485 PF03232 Ubiquinone biosynthesis protein COQ7 JYG33_16495 PF00224 Pyruvate kinase, barrel domain JYG33_16495 PF02887 Pyruvate kinase, alpha/beta domain JYG33_16500 PF03928 Haem-degrading JYG33_16505 PF13660 Domain of unknown function (DUF4147) JYG33_16505 PF05161 MOFRL family JYG33_16510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYG33_16510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYG33_16515 PF01261 Xylose isomerase-like TIM barrel JYG33_16520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYG33_16520 PF00205 Thiamine pyrophosphate enzyme, central domain JYG33_16520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYG33_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_16525 PF03466 LysR substrate binding domain JYG33_16535 PF00860 Permease family JYG33_16540 PF01361 Tautomerase enzyme JYG33_16545 PF00596 Class II Aldolase and Adducin N-terminal domain JYG33_16550 PF04115 Ureidoglycolate lyase JYG33_16555 PF01014 Uricase JYG33_16555 PF09349 OHCU decarboxylase JYG33_16560 PF03466 LysR substrate binding domain JYG33_16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_16565 PF00953 Glycosyl transferase family 4 JYG33_16570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYG33_16570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYG33_16570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYG33_16575 PF01370 NAD dependent epimerase/dehydratase family JYG33_16585 PF00534 Glycosyl transferases group 1 JYG33_16585 PF13439 Glycosyltransferase Family 4 JYG33_16590 PF17102 Stealth protein CR3, conserved region 3 JYG33_16590 PF11380 Stealth protein CR2, conserved region 2 JYG33_16590 PF17101 Stealth protein CR1, conserved region 1 JYG33_16590 PF00534 Glycosyl transferases group 1 JYG33_16590 PF17103 Stealth protein CR4, conserved region 4 JYG33_16595 PF13477 Glycosyl transferase 4-like JYG33_16595 PF00534 Glycosyl transferases group 1 JYG33_16600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYG33_16600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYG33_16600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYG33_16600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYG33_16605 PF01565 FAD binding domain JYG33_16605 PF02913 FAD linked oxidases, C-terminal domain JYG33_16615 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYG33_16620 PF04209 homogentisate 1,2-dioxygenase JYG33_16630 PF01494 FAD binding domain JYG33_16640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYG33_16640 PF06827 Zinc finger found in FPG and IleRS JYG33_16640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYG33_16650 PF03550 Outer membrane lipoprotein LolB JYG33_16655 PF08544 GHMP kinases C terminal JYG33_16655 PF00288 GHMP kinases N terminal domain JYG33_16665 PF14572 Phosphoribosyl synthetase-associated domain JYG33_16665 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JYG33_16670 PF01386 Ribosomal L25p family JYG33_16670 PF14693 Ribosomal protein TL5, C-terminal domain JYG33_16675 PF01195 Peptidyl-tRNA hydrolase JYG33_16685 PF01926 50S ribosome-binding GTPase JYG33_16685 PF06071 Protein of unknown function (DUF933) JYG33_16695 PF01909 Nucleotidyltransferase domain JYG33_16695 PF13427 Domain of unknown function (DUF4111) JYG33_16700 PF12848 ABC transporter JYG33_16700 PF16326 ABC transporter C-terminal domain JYG33_16700 PF00005 ABC transporter JYG33_16710 PF00657 GDSL-like Lipase/Acylhydrolase JYG33_16710 PF03797 Autotransporter beta-domain JYG33_16715 PF00484 Carbonic anhydrase JYG33_16720 PF03466 LysR substrate binding domain JYG33_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_16730 PF00005 ABC transporter JYG33_16735 PF03379 CcmB protein JYG33_16740 PF01578 Cytochrome C assembly protein JYG33_16750 PF03100 CcmE JYG33_16755 PF01578 Cytochrome C assembly protein JYG33_16755 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JYG33_16760 PF08534 Redoxin JYG33_16765 PF03918 Cytochrome C biogenesis protein JYG33_16775 PF02683 Cytochrome C biogenesis protein transmembrane region JYG33_16785 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYG33_16785 PF02805 Metal binding domain of Ada JYG33_16785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYG33_16785 PF12833 Helix-turn-helix domain JYG33_16805 PF02653 Branched-chain amino acid transport system / permease component JYG33_16810 PF11862 Domain of unknown function (DUF3382) JYG33_16810 PF02653 Branched-chain amino acid transport system / permease component JYG33_16815 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYG33_16815 PF00005 ABC transporter JYG33_16820 PF00005 ABC transporter JYG33_16825 PF03150 Di-haem cytochrome c peroxidase JYG33_16825 PF00034 Cytochrome c JYG33_16830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYG33_16830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYG33_16830 PF01842 ACT domain JYG33_16835 PF02082 Transcriptional regulator JYG33_16840 PF01152 Bacterial-like globin JYG33_16845 PF00535 Glycosyl transferase family 2 JYG33_16875 PF00582 Universal stress protein family JYG33_16885 PF02634 FdhD/NarQ family JYG33_16890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYG33_16890 PF00384 Molybdopterin oxidoreductase JYG33_16890 PF01568 Molydopterin dinucleotide binding domain JYG33_16890 PF12838 4Fe-4S dicluster domain JYG33_16890 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JYG33_16895 PF00037 4Fe-4S binding domain JYG33_16895 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYG33_16895 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYG33_16905 PF12728 Helix-turn-helix domain JYG33_16905 PF12727 PBP superfamily domain JYG33_16910 PF06463 Molybdenum Cofactor Synthesis C JYG33_16910 PF04055 Radical SAM superfamily JYG33_16915 PF12804 MobA-like NTP transferase domain JYG33_16920 PF03454 MoeA C-terminal region (domain IV) JYG33_16920 PF03453 MoeA N-terminal region (domain I and II) JYG33_16920 PF00994 Probable molybdopterin binding domain JYG33_16925 PF00994 Probable molybdopterin binding domain JYG33_16930 PF02391 MoaE protein JYG33_16940 PF01967 MoaC family JYG33_16945 PF00196 Bacterial regulatory proteins, luxR family JYG33_16945 PF00072 Response regulator receiver domain JYG33_16950 PF00512 His Kinase A (phospho-acceptor) domain JYG33_16950 PF00989 PAS fold JYG33_16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_16955 PF03480 Bacterial extracellular solute-binding protein, family 7 JYG33_16960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JYG33_16965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_16970 PF08534 Redoxin JYG33_16990 PF06968 Biotin and Thiamin Synthesis associated domain JYG33_16990 PF04055 Radical SAM superfamily JYG33_17005 PF00873 AcrB/AcrD/AcrF family JYG33_17050 PF00990 Diguanylate cyclase, GGDEF domain JYG33_17050 PF03707 Bacterial signalling protein N terminal repeat JYG33_17050 PF00563 EAL domain JYG33_17055 PF00795 Carbon-nitrogen hydrolase JYG33_17060 PF00571 CBS domain JYG33_17060 PF03471 Transporter associated domain JYG33_17065 PF02130 Uncharacterized protein family UPF0054 JYG33_17070 PF02562 PhoH-like protein JYG33_17075 PF04055 Radical SAM superfamily JYG33_17075 PF01938 TRAM domain JYG33_17075 PF00919 Uncharacterized protein family UPF0004 JYG33_17085 PF00557 Metallopeptidase family M24 JYG33_17090 PF02355 Protein export membrane protein JYG33_17090 PF07549 SecD/SecF GG Motif JYG33_17095 PF13721 SecD export protein N-terminal TM region JYG33_17095 PF07549 SecD/SecF GG Motif JYG33_17095 PF02355 Protein export membrane protein JYG33_17100 PF02699 Preprotein translocase subunit JYG33_17105 PF01702 Queuine tRNA-ribosyltransferase JYG33_17110 PF02547 Queuosine biosynthesis protein JYG33_17115 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JYG33_17130 PF05957 Bacterial protein of unknown function (DUF883) JYG33_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_17145 PF03466 LysR substrate binding domain JYG33_17155 PF00970 Oxidoreductase FAD-binding domain JYG33_17155 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_17160 PF01370 NAD dependent epimerase/dehydratase family JYG33_17175 PF01425 Amidase JYG33_17185 PF00083 Sugar (and other) transporter JYG33_17185 PF08946 Osmosensory transporter coiled coil JYG33_17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_17190 PF03466 LysR substrate binding domain JYG33_17195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYG33_17200 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYG33_17205 PF01464 Transglycosylase SLT domain JYG33_17210 PF00155 Aminotransferase class I and II JYG33_17220 PF00390 Malic enzyme, N-terminal domain JYG33_17220 PF03949 Malic enzyme, NAD binding domain JYG33_17220 PF01515 Phosphate acetyl/butaryl transferase JYG33_17230 PF01337 Barstar (barnase inhibitor) JYG33_17235 PF04452 RNA methyltransferase JYG33_17240 PF02779 Transketolase, pyrimidine binding domain JYG33_17240 PF02780 Transketolase, C-terminal domain JYG33_17240 PF00456 Transketolase, thiamine diphosphate binding domain JYG33_17245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYG33_17245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYG33_17250 PF00162 Phosphoglycerate kinase JYG33_17260 PF00171 Aldehyde dehydrogenase family JYG33_17270 PF00994 Probable molybdopterin binding domain JYG33_17275 PF01116 Fructose-bisphosphate aldolase class-II JYG33_17280 PF01259 SAICAR synthetase JYG33_17285 PF00731 AIR carboxylase JYG33_17290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JYG33_17290 PF02222 ATP-grasp domain JYG33_17295 PF03481 Putative GTP-binding controlling metal-binding JYG33_17295 PF01300 Telomere recombination JYG33_17300 PF12697 Alpha/beta hydrolase family JYG33_17305 PF01575 MaoC like domain JYG33_17305 PF00171 Aldehyde dehydrogenase family JYG33_17310 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_17310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYG33_17310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYG33_17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_17315 PF03466 LysR substrate binding domain JYG33_17325 PF00551 Formyl transferase JYG33_17330 PF01266 FAD dependent oxidoreductase JYG33_17335 PF01613 Flavin reductase like domain JYG33_17340 PF01243 Pyridoxamine 5'-phosphate oxidase JYG33_17340 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JYG33_17350 PF00899 ThiF family JYG33_17360 PF04715 Anthranilate synthase component I, N terminal region JYG33_17360 PF00425 chorismate binding enzyme JYG33_17365 PF00005 ABC transporter JYG33_17365 PF17755 UvrA DNA-binding domain JYG33_17365 PF17760 UvrA interaction domain JYG33_17370 PF00535 Glycosyl transferase family 2 JYG33_17380 PF00005 ABC transporter JYG33_17380 PF12848 ABC transporter JYG33_17395 PF03776 Septum formation topological specificity factor MinE JYG33_17400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYG33_17405 PF03775 Septum formation inhibitor MinC, C-terminal domain JYG33_17405 PF05209 Septum formation inhibitor MinC, N-terminal domain JYG33_17410 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYG33_17410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JYG33_17415 PF01654 Cytochrome bd terminal oxidase subunit I JYG33_17420 PF02322 Cytochrome bd terminal oxidase subunit II JYG33_17425 PF00654 Voltage gated chloride channel JYG33_17435 PF00570 HRDC domain JYG33_17435 PF09382 RQC domain JYG33_17435 PF16124 RecQ zinc-binding JYG33_17435 PF00271 Helicase conserved C-terminal domain JYG33_17435 PF00270 DEAD/DEAH box helicase JYG33_17440 PF00317 Ribonucleotide reductase, all-alpha domain JYG33_17440 PF02867 Ribonucleotide reductase, barrel domain JYG33_17440 PF03477 ATP cone domain JYG33_17445 PF00268 Ribonucleotide reductase, small chain JYG33_17450 PF00111 2Fe-2S iron-sulfur cluster binding domain JYG33_17455 PF12848 ABC transporter JYG33_17455 PF16326 ABC transporter C-terminal domain JYG33_17455 PF00005 ABC transporter JYG33_17465 PF02381 MraZ protein, putative antitoxin-like JYG33_17470 PF01795 MraW methylase family JYG33_17475 PF04999 Cell division protein FtsL JYG33_17480 PF03717 Penicillin-binding Protein dimerisation domain JYG33_17480 PF00905 Penicillin binding protein transpeptidase domain JYG33_17485 PF02875 Mur ligase family, glutamate ligase domain JYG33_17485 PF01225 Mur ligase family, catalytic domain JYG33_17485 PF08245 Mur ligase middle domain JYG33_17490 PF00953 Glycosyl transferase family 4 JYG33_17495 PF08245 Mur ligase middle domain JYG33_17495 PF02875 Mur ligase family, glutamate ligase domain JYG33_17500 PF01098 Cell cycle protein JYG33_17505 PF04101 Glycosyltransferase family 28 C-terminal domain JYG33_17505 PF03033 Glycosyltransferase family 28 N-terminal domain JYG33_17510 PF01225 Mur ligase family, catalytic domain JYG33_17510 PF08245 Mur ligase middle domain JYG33_17510 PF02875 Mur ligase family, glutamate ligase domain JYG33_17515 PF07478 D-ala D-ala ligase C-terminus JYG33_17515 PF01820 D-ala D-ala ligase N-terminus JYG33_17520 PF03799 Cell division protein FtsQ JYG33_17520 PF08478 POTRA domain, FtsQ-type JYG33_17525 PF02491 SHS2 domain inserted in FTSA JYG33_17530 PF12327 FtsZ family, C-terminal domain JYG33_17530 PF00091 Tubulin/FtsZ family, GTPase domain JYG33_17535 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JYG33_17545 PF08525 Opacity-associated protein A N-terminal motif JYG33_17545 PF01551 Peptidase family M23 JYG33_17545 PF01476 LysM domain JYG33_17550 PF07516 SecA Wing and Scaffold domain JYG33_17550 PF01043 SecA preprotein cross-linking domain JYG33_17550 PF02810 SEC-C motif JYG33_17550 PF07517 SecA DEAD-like domain JYG33_17560 PF00571 CBS domain JYG33_17560 PF01769 Divalent cation transporter JYG33_17560 PF03448 MgtE intracellular N domain JYG33_17565 PF03061 Thioesterase superfamily JYG33_17570 PF07687 Peptidase dimerisation domain JYG33_17570 PF01546 Peptidase family M20/M25/M40 JYG33_17575 PF00501 AMP-binding enzyme JYG33_17575 PF13193 AMP-binding enzyme C-terminal domain JYG33_17580 PF00459 Inositol monophosphatase family JYG33_17585 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JYG33_17585 PF01266 FAD dependent oxidoreductase JYG33_17605 PF00005 ABC transporter JYG33_17605 PF09383 NIL domain JYG33_17610 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_17615 PF03180 NLPA lipoprotein JYG33_17620 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYG33_17625 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_17630 PF00005 ABC transporter JYG33_17640 PF00483 Nucleotidyl transferase JYG33_17645 PF01636 Phosphotransferase enzyme family JYG33_17650 PF04453 LPS transport system D JYG33_17655 PF09312 SurA N-terminal domain JYG33_17655 PF00639 PPIC-type PPIASE domain JYG33_17660 PF00398 Ribosomal RNA adenine dimethylase JYG33_17665 PF07670 Nucleoside recognition JYG33_17670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYG33_17680 PF01553 Acyltransferase JYG33_17690 PF05746 DALR anticodon binding domain JYG33_17690 PF02092 Glycyl-tRNA synthetase beta subunit JYG33_17695 PF02091 Glycyl-tRNA synthetase alpha subunit JYG33_17705 PF00378 Enoyl-CoA hydratase/isomerase JYG33_17710 PF05683 Fumarase C-terminus JYG33_17710 PF05681 Fumarate hydratase (Fumerase) JYG33_17715 PF00440 Bacterial regulatory proteins, tetR family JYG33_17725 PF07690 Major Facilitator Superfamily JYG33_17740 PF03167 Uracil DNA glycosylase superfamily JYG33_17745 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JYG33_17750 PF12627 Probable RNA and SrmB- binding site of polymerase A JYG33_17750 PF12626 Polymerase A arginine-rich C-terminus JYG33_17750 PF01743 Poly A polymerase head domain JYG33_17760 PF08299 Bacterial dnaA protein helix-turn-helix JYG33_17760 PF00308 Bacterial dnaA protein JYG33_17765 PF02769 AIR synthase related protein, C-terminal domain JYG33_17765 PF00586 AIR synthase related protein, N-terminal domain JYG33_17775 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYG33_17785 PF01119 DNA mismatch repair protein, C-terminal domain JYG33_17785 PF08676 MutL C terminal dimerisation domain JYG33_17790 PF09335 SNARE associated Golgi protein JYG33_17795 PF01520 N-acetylmuramoyl-L-alanine amidase JYG33_17795 PF11741 AMIN domain JYG33_17800 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JYG33_17810 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_17815 PF00390 Malic enzyme, N-terminal domain JYG33_17815 PF03949 Malic enzyme, NAD binding domain JYG33_17815 PF01515 Phosphate acetyl/butaryl transferase JYG33_17820 PF03466 LysR substrate binding domain JYG33_17820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_17825 PF00171 Aldehyde dehydrogenase family JYG33_17830 PF00701 Dihydrodipicolinate synthetase family JYG33_17840 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYG33_17865 PF01638 HxlR-like helix-turn-helix JYG33_17870 PF13460 NAD(P)H-binding JYG33_17885 PF04073 Aminoacyl-tRNA editing domain JYG33_17890 PF02899 Phage integrase, N-terminal SAM-like domain JYG33_17890 PF00589 Phage integrase family JYG33_17900 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_17905 PF03459 TOBE domain JYG33_17905 PF00005 ABC transporter JYG33_17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_17910 PF03459 TOBE domain JYG33_17920 PF13361 UvrD-like helicase C-terminal domain JYG33_17920 PF00580 UvrD/REP helicase N-terminal domain JYG33_17920 PF12705 PD-(D/E)XK nuclease superfamily JYG33_17930 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JYG33_17930 PF12169 DNA polymerase III subunits gamma and tau domain III JYG33_17930 PF12170 DNA polymerase III tau subunit V interacting with alpha JYG33_17935 PF02575 YbaB/EbfC DNA-binding family JYG33_17940 PF13662 Toprim domain JYG33_17940 PF02132 RecR protein JYG33_17945 PF09084 NMT1/THI5 like JYG33_17950 PF00005 ABC transporter JYG33_17955 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_17960 PF08241 Methyltransferase domain JYG33_17965 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYG33_17970 PF00117 Glutamine amidotransferase class-I JYG33_17970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JYG33_17975 PF02142 MGS-like domain JYG33_17975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYG33_17975 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JYG33_17985 PF00106 short chain dehydrogenase JYG33_17990 PF00300 Histidine phosphatase superfamily (branch 1) JYG33_17995 PF00860 Permease family JYG33_18005 PF01272 Transcription elongation factor, GreA/GreB, C-term JYG33_18005 PF03449 Transcription elongation factor, N-terminal JYG33_18010 PF01985 CRS1 / YhbY (CRM) domain JYG33_18015 PF01728 FtsJ-like methyltransferase JYG33_18020 PF06480 FtsH Extracellular JYG33_18020 PF17862 AAA+ lid domain JYG33_18020 PF00004 ATPase family associated with various cellular activities (AAA) JYG33_18020 PF01434 Peptidase family M41 JYG33_18025 PF00809 Pterin binding enzyme JYG33_18030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYG33_18030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYG33_18030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYG33_18030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYG33_18040 PF02541 Ppx/GppA phosphatase family JYG33_18045 PF13090 Polyphosphate kinase C-terminal domain 2 JYG33_18045 PF13089 Polyphosphate kinase N-terminal domain JYG33_18045 PF17941 Polyphosphate kinase C-terminal domain 1 JYG33_18045 PF02503 Polyphosphate kinase middle domain JYG33_18050 PF12849 PBP superfamily domain JYG33_18055 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_18060 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_18065 PF00005 ABC transporter JYG33_18070 PF13193 AMP-binding enzyme C-terminal domain JYG33_18070 PF00501 AMP-binding enzyme JYG33_18085 PF00072 Response regulator receiver domain JYG33_18085 PF00486 Transcriptional regulatory protein, C terminal JYG33_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYG33_18105 PF03466 LysR substrate binding domain JYG33_18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_18120 PF01593 Flavin containing amine oxidoreductase JYG33_18125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYG33_18125 PF00034 Cytochrome c JYG33_18140 PF00884 Sulfatase JYG33_18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_18150 PF03466 LysR substrate binding domain JYG33_18170 PF00474 Sodium:solute symporter family JYG33_18175 PF08223 PaaX-like protein C-terminal domain JYG33_18175 PF07848 PaaX-like protein JYG33_18180 PF13396 Phospholipase_D-nuclease N-terminal JYG33_18180 PF13091 PLD-like domain JYG33_18195 PF01300 Telomere recombination JYG33_18200 PF02163 Peptidase family M50 JYG33_18205 PF00701 Dihydrodipicolinate synthetase family JYG33_18210 PF06804 NlpB/DapX lipoprotein JYG33_18230 PF00202 Aminotransferase class-III JYG33_18235 PF00155 Aminotransferase class I and II JYG33_18240 PF00067 Cytochrome P450 JYG33_18245 PF03594 Benzoate membrane transport protein JYG33_18250 PF08007 Cupin superfamily protein JYG33_18255 PF00488 MutS domain V JYG33_18255 PF05190 MutS family domain IV JYG33_18255 PF05192 MutS domain III JYG33_18255 PF05188 MutS domain II JYG33_18255 PF01624 MutS domain I JYG33_18270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYG33_18275 PF02687 FtsX-like permease family JYG33_18275 PF00005 ABC transporter JYG33_18275 PF12704 MacB-like periplasmic core domain JYG33_18280 PF02321 Outer membrane efflux protein JYG33_18285 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JYG33_18290 PF00005 ABC transporter JYG33_18290 PF00664 ABC transporter transmembrane region JYG33_18300 PF03401 Tripartite tricarboxylate transporter family receptor JYG33_18305 PF03466 LysR substrate binding domain JYG33_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_18310 PF00296 Luciferase-like monooxygenase JYG33_18320 PF05552 Conserved TM helix JYG33_18320 PF00924 Mechanosensitive ion channel JYG33_18325 PF03466 LysR substrate binding domain JYG33_18325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYG33_18330 PF14765 Polyketide synthase dehydratase JYG33_18330 PF00550 Phosphopantetheine attachment site JYG33_18330 PF08659 KR domain JYG33_18330 PF02801 Beta-ketoacyl synthase, C-terminal domain JYG33_18330 PF00109 Beta-ketoacyl synthase, N-terminal domain JYG33_18330 PF00698 Acyl transferase domain JYG33_18330 PF16197 Ketoacyl-synthetase C-terminal extension JYG33_18335 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JYG33_18350 PF01039 Carboxyl transferase domain JYG33_18355 PF06857 Malonate decarboxylase delta subunit (MdcD) JYG33_18360 PF16957 Malonate decarboxylase, alpha subunit, transporter JYG33_18365 PF01425 Amidase JYG33_18370 PF02667 Short chain fatty acid transporter JYG33_18380 PF00588 SpoU rRNA Methylase family JYG33_18385 PF00459 Inositol monophosphatase family JYG33_18390 PF03741 Integral membrane protein TerC family JYG33_18390 PF03471 Transporter associated domain JYG33_18395 PF02673 Bacitracin resistance protein BacA JYG33_18400 PF00149 Calcineurin-like phosphoesterase JYG33_18405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYG33_18415 PF01406 tRNA synthetases class I (C) catalytic domain JYG33_18415 PF09190 DALR domain JYG33_18425 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JYG33_18430 PF09179 TilS substrate binding domain JYG33_18430 PF01171 PP-loop family JYG33_18435 PF13840 ACT domain JYG33_18435 PF00696 Amino acid kinase family JYG33_18435 PF01842 ACT domain JYG33_18455 PF01145 SPFH domain / Band 7 family JYG33_18465 PF14525 AraC-binding-like domain JYG33_18470 PF00795 Carbon-nitrogen hydrolase JYG33_18480 PF00132 Bacterial transferase hexapeptide (six repeats) JYG33_18490 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_18495 PF08402 TOBE domain JYG33_18495 PF00005 ABC transporter JYG33_18500 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JYG33_18500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JYG33_18505 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JYG33_18510 PF02233 NAD(P) transhydrogenase beta subunit JYG33_18535 PF01070 FMN-dependent dehydrogenase JYG33_18540 PF13409 Glutathione S-transferase, N-terminal domain JYG33_18545 PF03358 NADPH-dependent FMN reductase JYG33_18560 PF02245 Methylpurine-DNA glycosylase (MPG) JYG33_18565 PF00962 Adenosine/AMP deaminase JYG33_18570 PF04241 Protein of unknown function (DUF423) JYG33_18575 PF01544 CorA-like Mg2+ transporter protein JYG33_18580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYG33_18580 PF18158 Adaptive response protein AidB N-terminal domain JYG33_18580 PF02770 Acyl-CoA dehydrogenase, middle domain JYG33_18590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYG33_18595 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_18600 PF00528 Binding-protein-dependent transport system inner membrane component JYG33_18600 PF12911 N-terminal TM domain of oligopeptide transport permease C JYG33_18605 PF00005 ABC transporter JYG33_18605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYG33_18615 PF01590 GAF domain JYG33_18615 PF02954 Bacterial regulatory protein, Fis family JYG33_18615 PF00158 Sigma-54 interaction domain JYG33_18620 PF00171 Aldehyde dehydrogenase family JYG33_18625 PF00465 Iron-containing alcohol dehydrogenase JYG33_18630 PF00069 Protein kinase domain