locus-tag class description ABO_0001 PF11638 DnaA N-terminal domain ABO_0001 PF08299 Bacterial dnaA protein helix-turn-helix ABO_0001 PF00308 Bacterial dnaA protein ABO_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABO_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABO_0002 PF02767 DNA polymerase III beta subunit, central domain ABO_0003 PF02463 RecF/RecN/SMC N terminal domain ABO_0004 PF00204 DNA gyrase B ABO_0004 PF00986 DNA gyrase B subunit, carboxyl terminus ABO_0004 PF18053 DNA gyrase B subunit insert domain ABO_0004 PF01751 Toprim domain ABO_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0005 PF00816 H-NS histone family ABO_0008 PF02092 Glycyl-tRNA synthetase beta subunit ABO_0008 PF05746 DALR anticodon binding domain ABO_0009 PF02091 Glycyl-tRNA synthetase alpha subunit ABO_0010 PF03352 Methyladenine glycosylase ABO_0013 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABO_0013 PF01926 50S ribosome-binding GTPase ABO_0014 PF01047 MarR family ABO_0015 PF04632 Fusaric acid resistance protein family ABO_0017 PF13533 Biotin-lipoyl like ABO_0019 PF02311 AraC-like ligand binding domain ABO_0019 PF12833 Helix-turn-helix domain ABO_0020 PF00171 Aldehyde dehydrogenase family ABO_0021 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_0021 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_0021 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_0022 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABO_0022 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABO_0023 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ABO_0024 PF07043 Protein of unknown function (DUF1328) ABO_0025 PF02678 Pirin ABO_0025 PF05726 Pirin C-terminal cupin domain ABO_0026 PF13409 Glutathione S-transferase, N-terminal domain ABO_0027 PF02525 Flavodoxin-like fold ABO_0028 PF03466 LysR substrate binding domain ABO_0028 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_0030 PF00512 His Kinase A (phospho-acceptor) domain ABO_0030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0030 PF08521 Two-component sensor kinase N-terminal ABO_0031 PF00072 Response regulator receiver domain ABO_0031 PF00486 Transcriptional regulatory protein, C terminal ABO_0032 PF08534 Redoxin ABO_0033 PF13098 Thioredoxin-like domain ABO_0034 PF01979 Amidohydrolase family ABO_0035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABO_0035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABO_0036 PF00156 Phosphoribosyl transferase domain ABO_0037 PF01292 Prokaryotic cytochrome b561 ABO_0038 PF04264 YceI-like domain ABO_0042 PF01636 Phosphotransferase enzyme family ABO_0043 PF07859 alpha/beta hydrolase fold ABO_0044 PF08534 Redoxin ABO_0048 PF04461 Protein of unknown function (DUF520) ABO_0051 PF00117 Glutamine amidotransferase class-I ABO_0051 PF00958 GMP synthase C terminal domain ABO_0051 PF02540 NAD synthase ABO_0053 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_0055 PF07690 Major Facilitator Superfamily ABO_0057 PF04286 Protein of unknown function (DUF445) ABO_0059 PF00472 RF-1 domain ABO_0061 PF00550 Phosphopantetheine attachment site ABO_0061 PF08659 KR domain ABO_0061 PF08240 Alcohol dehydrogenase GroES-like domain ABO_0061 PF16197 Ketoacyl-synthetase C-terminal extension ABO_0061 PF00698 Acyl transferase domain ABO_0061 PF14765 Polyketide synthase dehydratase ABO_0061 PF00109 Beta-ketoacyl synthase, N-terminal domain ABO_0061 PF02801 Beta-ketoacyl synthase, C-terminal domain ABO_0063 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ABO_0063 PF18381 YcaO cyclodehydratase C-terminal domain ABO_0064 PF01814 Hemerythrin HHE cation binding domain ABO_0066 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABO_0067 PF01565 FAD binding domain ABO_0067 PF02913 FAD linked oxidases, C-terminal domain ABO_0068 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABO_0068 PF01842 ACT domain ABO_0068 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABO_0075 PF02254 TrkA-N domain ABO_0075 PF00999 Sodium/hydrogen exchanger family ABO_0076 PF07715 TonB-dependent Receptor Plug Domain ABO_0076 PF00593 TonB dependent receptor ABO_0079 PF13302 Acetyltransferase (GNAT) domain ABO_0081 PF01467 Cytidylyltransferase-like ABO_0083 PF13333 Integrase core domain ABO_0083 PF13276 HTH-like domain ABO_0083 PF00665 Integrase core domain ABO_0085 PF05199 GMC oxidoreductase ABO_0085 PF00732 GMC oxidoreductase ABO_0087 PF00171 Aldehyde dehydrogenase family ABO_0088 PF00440 Bacterial regulatory proteins, tetR family ABO_0089 PF00561 alpha/beta hydrolase fold ABO_0090 PF04452 RNA methyltransferase ABO_0092 PF00892 EamA-like transporter family ABO_0095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABO_0096 PF01145 SPFH domain / Band 7 family ABO_0098 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABO_0099 PF01292 Prokaryotic cytochrome b561 ABO_0101 PF12706 Beta-lactamase superfamily domain ABO_0103 PF01339 CheB methylesterase ABO_0103 PF00072 Response regulator receiver domain ABO_0104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0104 PF01627 Hpt domain ABO_0104 PF00072 Response regulator receiver domain ABO_0104 PF01584 CheW-like domain ABO_0105 PF03705 CheR methyltransferase, all-alpha domain ABO_0105 PF01739 CheR methyltransferase, SAM binding domain ABO_0106 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABO_0106 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABO_0107 PF01584 CheW-like domain ABO_0108 PF00072 Response regulator receiver domain ABO_0109 PF00072 Response regulator receiver domain ABO_0110 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABO_0110 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABO_0112 PF02622 Uncharacterized ACR, COG1678 ABO_0113 PF03652 Holliday junction resolvase ABO_0114 PF04116 Fatty acid hydroxylase superfamily ABO_0116 PF00756 Putative esterase ABO_0117 PF08240 Alcohol dehydrogenase GroES-like domain ABO_0117 PF00107 Zinc-binding dehydrogenase ABO_0118 PF03466 LysR substrate binding domain ABO_0118 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_0119 PF13419 Haloacid dehalogenase-like hydrolase ABO_0120 PF01425 Amidase ABO_0122 PF00487 Fatty acid desaturase ABO_0124 PF02753 Pili assembly chaperone PapD, C-terminal domain ABO_0124 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABO_0125 PF00577 Outer membrane usher protein ABO_0125 PF13953 PapC C-terminal domain ABO_0125 PF13954 PapC N-terminal domain ABO_0127 PF02386 Cation transport protein ABO_0128 PF02080 TrkA-C domain ABO_0128 PF02254 TrkA-N domain ABO_0129 PF01189 16S rRNA methyltransferase RsmB/F ABO_0129 PF01029 NusB family ABO_0130 PF02911 Formyl transferase, C-terminal domain ABO_0130 PF00551 Formyl transferase ABO_0131 PF01327 Polypeptide deformylase ABO_0133 PF02481 DNA recombination-mediator protein A ABO_0133 PF17782 DprA winged helix domain ABO_0134 PF01300 Telomere recombination ABO_0135 PF01218 Coproporphyrinogen III oxidase ABO_0136 PF08501 Shikimate dehydrogenase substrate binding domain ABO_0136 PF01488 Shikimate / quinate 5-dehydrogenase ABO_0136 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABO_0139 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_0140 PF01432 Peptidase family M3 ABO_0144 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_0144 PF12833 Helix-turn-helix domain ABO_0145 PF00175 Oxidoreductase NAD-binding domain ABO_0145 PF00970 Oxidoreductase FAD-binding domain ABO_0147 PF02654 Cobalamin-5-phosphate synthase ABO_0148 PF00378 Enoyl-CoA hydratase/isomerase ABO_0148 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABO_0148 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABO_0153 PF00313 'Cold-shock' DNA-binding domain ABO_0155 PF01297 Zinc-uptake complex component A periplasmic ABO_0156 PF00005 ABC transporter ABO_0157 PF00950 ABC 3 transport family ABO_0158 PF01554 MatE ABO_0159 PF00990 Diguanylate cyclase, GGDEF domain ABO_0159 PF17155 Gammaproteobacterial periplasmic sensor domain ABO_0162 PF18113 Rubredoxin binding C-terminal domain ABO_0162 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_0163 PF00301 Rubredoxin ABO_0164 PF04345 Chorismate lyase ABO_0165 PF01040 UbiA prenyltransferase family ABO_0166 PF00486 Transcriptional regulatory protein, C terminal ABO_0166 PF00072 Response regulator receiver domain ABO_0167 PF11808 Phosphate regulon sensor protein PhoR ABO_0167 PF00512 His Kinase A (phospho-acceptor) domain ABO_0167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0167 PF00989 PAS fold ABO_0168 PF00271 Helicase conserved C-terminal domain ABO_0168 PF17191 RecG wedge domain ABO_0168 PF00270 DEAD/DEAH box helicase ABO_0169 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_0169 PF03466 LysR substrate binding domain ABO_0171 PF00731 AIR carboxylase ABO_0172 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABO_0172 PF02222 ATP-grasp domain ABO_0175 PF01042 Endoribonuclease L-PSP ABO_0176 PF04607 Region found in RelA / SpoT proteins ABO_0176 PF13291 ACT domain ABO_0176 PF02824 TGS domain ABO_0177 PF01192 RNA polymerase Rpb6 ABO_0178 PF00625 Guanylate kinase ABO_0179 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABO_0180 PF00920 Dehydratase family ABO_0184 PF13193 AMP-binding enzyme C-terminal domain ABO_0184 PF00501 AMP-binding enzyme ABO_0185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_0185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_0185 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_0187 PF00732 GMC oxidoreductase ABO_0187 PF05199 GMC oxidoreductase ABO_0189 PF00106 short chain dehydrogenase ABO_0190 PF00743 Flavin-binding monooxygenase-like ABO_0192 PF13205 Bacterial Ig-like domain ABO_0193 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ABO_0194 PF00743 Flavin-binding monooxygenase-like ABO_0195 PF07859 alpha/beta hydrolase fold ABO_0196 PF00106 short chain dehydrogenase ABO_0198 PF17932 Tetracyclin repressor-like, C-terminal domain ABO_0198 PF00440 Bacterial regulatory proteins, tetR family ABO_0199 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_0199 PF12833 Helix-turn-helix domain ABO_0200 PF00111 2Fe-2S iron-sulfur cluster binding domain ABO_0201 PF00067 Cytochrome P450 ABO_0202 PF00732 GMC oxidoreductase ABO_0202 PF05199 GMC oxidoreductase ABO_0203 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_0203 PF14759 Reductase C-terminal ABO_0205 PF08340 Domain of unknown function (DUF1732) ABO_0205 PF03755 YicC-like family, N-terminal region ABO_0206 PF01138 3' exoribonuclease family, domain 1 ABO_0206 PF03725 3' exoribonuclease family, domain 2 ABO_0207 PF00156 Phosphoribosyl transferase domain ABO_0209 PF00440 Bacterial regulatory proteins, tetR family ABO_0210 PF00696 Amino acid kinase family ABO_0211 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABO_0211 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABO_0211 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABO_0211 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABO_0212 PF00692 dUTPase ABO_0213 PF02441 Flavoprotein ABO_0213 PF04127 DNA / pantothenate metabolism flavoprotein ABO_0214 PF04002 RadC-like JAB domain ABO_0215 PF00830 Ribosomal L28 family ABO_0216 PF00471 Ribosomal protein L33 ABO_0219 PF04972 BON domain ABO_0219 PF13629 Pilus formation protein N terminal region ABO_0219 PF00263 Bacterial type II and III secretion system protein ABO_0221 PF00437 Type II/IV secretion system protein ABO_0232 PF02028 BCCT, betaine/carnitine/choline family transporter ABO_0238 PF03600 Citrate transporter ABO_0244 PF13411 MerR HTH family regulatory protein ABO_0246 PF12843 Putative quorum-sensing-regulated virulence factor ABO_0248 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_0249 PF02687 FtsX-like permease family ABO_0249 PF00005 ABC transporter ABO_0249 PF12704 MacB-like periplasmic core domain ABO_0250 PF02321 Outer membrane efflux protein ABO_0251 PF00850 Histone deacetylase domain ABO_0253 PF02803 Thiolase, C-terminal domain ABO_0253 PF00108 Thiolase, N-terminal domain ABO_0254 PF00005 ABC transporter ABO_0254 PF12848 ABC transporter ABO_0256 PF00202 Aminotransferase class-III ABO_0256 PF04055 Radical SAM superfamily ABO_0256 PF06968 Biotin and Thiamin Synthesis associated domain ABO_0258 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABO_0258 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABO_0259 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ABO_0260 PF04172 LrgB-like family ABO_0261 PF03788 LrgA family ABO_0262 PF02600 Disulfide bond formation protein DsbB ABO_0263 PF04262 Glutamate-cysteine ligase ABO_0264 PF17674 HHH domain ABO_0264 PF09371 Tex-like protein N-terminal domain ABO_0264 PF16921 Tex protein YqgF-like domain ABO_0264 PF00575 S1 RNA binding domain ABO_0265 PF00072 Response regulator receiver domain ABO_0266 PF00873 AcrB/AcrD/AcrF family ABO_0267 PF00529 HlyD membrane-fusion protein of T1SS ABO_0267 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_0268 PF00072 Response regulator receiver domain ABO_0268 PF00486 Transcriptional regulatory protein, C terminal ABO_0269 PF00512 His Kinase A (phospho-acceptor) domain ABO_0269 PF00672 HAMP domain ABO_0269 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0271 PF02254 TrkA-N domain ABO_0271 PF02080 TrkA-C domain ABO_0272 PF02386 Cation transport protein ABO_0273 PF03631 Virulence factor BrkB ABO_0274 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_0275 PF01293 Phosphoenolpyruvate carboxykinase ABO_0276 PF01430 Hsp33 protein ABO_0277 PF01479 S4 domain ABO_0278 PF13419 Haloacid dehalogenase-like hydrolase ABO_0279 PF00293 NUDIX domain ABO_0280 PF00459 Inositol monophosphatase family ABO_0281 PF12146 Serine aminopeptidase, S33 ABO_0282 PF00743 Flavin-binding monooxygenase-like ABO_0283 PF03060 Nitronate monooxygenase ABO_0286 PF00106 short chain dehydrogenase ABO_0288 PF00743 Flavin-binding monooxygenase-like ABO_0291 PF00005 ABC transporter ABO_0291 PF12848 ABC transporter ABO_0294 PF00762 Ferrochelatase ABO_0296 PF00180 Isocitrate/isopropylmalate dehydrogenase ABO_0296 PF18324 Hypothetical protein TT1725 ABO_0297 PF00005 ABC transporter ABO_0298 PF01061 ABC-2 type transporter ABO_0299 PF01062 Bestrophin, RFP-TM, chloride channel ABO_0300 PF03435 Saccharopine dehydrogenase NADP binding domain ABO_0301 PF02810 SEC-C motif ABO_0302 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABO_0302 PF01243 Pyridoxamine 5'-phosphate oxidase ABO_0305 PF01668 SmpB protein ABO_0306 PF00209 Sodium:neurotransmitter symporter family ABO_0307 PF03658 RnfH family Ubiquitin ABO_0308 PF04355 SmpA / OmlA family ABO_0309 PF01475 Ferric uptake regulator family ABO_0310 PF02463 RecF/RecN/SMC N terminal domain ABO_0312 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ABO_0312 PF01628 HrcA protein C terminal domain ABO_0313 PF01025 GrpE ABO_0314 PF00012 Hsp70 protein ABO_0315 PF00226 DnaJ domain ABO_0315 PF01556 DnaJ C terminal domain ABO_0315 PF00684 DnaJ central domain ABO_0316 PF05173 Dihydrodipicolinate reductase, C-terminus ABO_0316 PF01113 Dihydrodipicolinate reductase, N-terminus ABO_0317 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABO_0317 PF00117 Glutamine amidotransferase class-I ABO_0318 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABO_0318 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABO_0318 PF02142 MGS-like domain ABO_0319 PF03449 Transcription elongation factor, N-terminal ABO_0319 PF01272 Transcription elongation factor, GreA/GreB, C-term ABO_0320 PF01985 CRS1 / YhbY (CRM) domain ABO_0321 PF01728 FtsJ-like methyltransferase ABO_0322 PF17862 AAA+ lid domain ABO_0322 PF06480 FtsH Extracellular ABO_0322 PF00004 ATPase family associated with various cellular activities (AAA) ABO_0322 PF01434 Peptidase family M41 ABO_0323 PF00809 Pterin binding enzyme ABO_0324 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABO_0324 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABO_0324 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABO_0324 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABO_0325 PF00121 Triosephosphate isomerase ABO_0326 PF03840 Preprotein translocase SecG subunit ABO_0327 PF17384 RimP C-terminal SH3 domain ABO_0327 PF02576 RimP N-terminal domain ABO_0328 PF08529 NusA N-terminal domain ABO_0328 PF13184 NusA-like KH domain ABO_0329 PF08364 Bacterial translation initiation factor IF-2 associated region ABO_0329 PF00009 Elongation factor Tu GTP binding domain ABO_0329 PF04760 Translation initiation factor IF-2, N-terminal region ABO_0329 PF11987 Translation-initiation factor 2 ABO_0330 PF02033 Ribosome-binding factor A ABO_0331 PF09157 Pseudouridine synthase II TruB, C-terminal ABO_0331 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABO_0331 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABO_0332 PF00312 Ribosomal protein S15 ABO_0333 PF01138 3' exoribonuclease family, domain 1 ABO_0333 PF03725 3' exoribonuclease family, domain 2 ABO_0333 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABO_0333 PF00575 S1 RNA binding domain ABO_0333 PF00013 KH domain ABO_0334 PF00501 AMP-binding enzyme ABO_0334 PF16177 Acetyl-coenzyme A synthetase N-terminus ABO_0334 PF13193 AMP-binding enzyme C-terminal domain ABO_0335 PF02261 Aspartate decarboxylase ABO_0336 PF02569 Pantoate-beta-alanine ligase ABO_0337 PF02548 Ketopantoate hydroxymethyltransferase ABO_0338 PF01712 Deoxynucleoside kinase ABO_0339 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABO_0340 PF01743 Poly A polymerase head domain ABO_0340 PF12627 Probable RNA and SrmB- binding site of polymerase A ABO_0340 PF12626 Polymerase A arginine-rich C-terminus ABO_0341 PF00072 Response regulator receiver domain ABO_0341 PF00158 Sigma-54 interaction domain ABO_0341 PF02954 Bacterial regulatory protein, Fis family ABO_0342 PF00512 His Kinase A (phospho-acceptor) domain ABO_0342 PF00989 PAS fold ABO_0342 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0344 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABO_0345 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABO_0347 PF03749 Sugar fermentation stimulation protein RE domain ABO_0347 PF17746 SfsA N-terminal OB domain ABO_0348 PF01636 Phosphotransferase enzyme family ABO_0350 PF00294 pfkB family carbohydrate kinase ABO_0351 PF00912 Transglycosylase ABO_0351 PF00905 Penicillin binding protein transpeptidase domain ABO_0351 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ABO_0351 PF14814 Bifunctional transglycosylase second domain ABO_0353 PF04073 Aminoacyl-tRNA editing domain ABO_0354 PF00202 Aminotransferase class-III ABO_0355 PF02581 Thiamine monophosphate synthase ABO_0356 PF08543 Phosphomethylpyrimidine kinase ABO_0356 PF03070 TENA/THI-4/PQQC family ABO_0356 PF02581 Thiamine monophosphate synthase ABO_0358 PF00654 Voltage gated chloride channel ABO_0359 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABO_0359 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABO_0362 PF01521 Iron-sulphur cluster biosynthesis ABO_0363 PF01569 PAP2 superfamily ABO_0364 PF03702 Anhydro-N-acetylmuramic acid kinase ABO_0365 PF04225 Opacity-associated protein A LysM-like domain ABO_0365 PF01551 Peptidase family M23 ABO_0366 PF00579 tRNA synthetases class I (W and Y) ABO_0367 PF00501 AMP-binding enzyme ABO_0368 PF08279 HTH domain ABO_0368 PF03099 Biotin/lipoate A/B protein ligase family ABO_0368 PF02237 Biotin protein ligase C terminal domain ABO_0369 PF03309 Type III pantothenate kinase ABO_0371 PF03144 Elongation factor Tu domain 2 ABO_0371 PF00009 Elongation factor Tu GTP binding domain ABO_0371 PF03143 Elongation factor Tu C-terminal domain ABO_0372 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABO_0373 PF00467 KOW motif ABO_0373 PF02357 Transcription termination factor nusG ABO_0374 PF00298 Ribosomal protein L11, RNA binding domain ABO_0374 PF03946 Ribosomal protein L11, N-terminal domain ABO_0375 PF00687 Ribosomal protein L1p/L10e family ABO_0376 PF00466 Ribosomal protein L10 ABO_0377 PF00542 Ribosomal protein L7/L12 C-terminal domain ABO_0377 PF16320 Ribosomal protein L7/L12 dimerisation domain ABO_0378 PF04560 RNA polymerase Rpb2, domain 7 ABO_0378 PF00562 RNA polymerase Rpb2, domain 6 ABO_0378 PF04563 RNA polymerase beta subunit ABO_0378 PF10385 RNA polymerase beta subunit external 1 domain ABO_0378 PF04565 RNA polymerase Rpb2, domain 3 ABO_0378 PF04561 RNA polymerase Rpb2, domain 2 ABO_0379 PF04998 RNA polymerase Rpb1, domain 5 ABO_0379 PF04983 RNA polymerase Rpb1, domain 3 ABO_0379 PF00623 RNA polymerase Rpb1, domain 2 ABO_0379 PF04997 RNA polymerase Rpb1, domain 1 ABO_0379 PF05000 RNA polymerase Rpb1, domain 4 ABO_0380 PF00164 Ribosomal protein S12/S23 ABO_0381 PF00177 Ribosomal protein S7p/S5e ABO_0382 PF03764 Elongation factor G, domain IV ABO_0382 PF03144 Elongation factor Tu domain 2 ABO_0382 PF14492 Elongation Factor G, domain II ABO_0382 PF00679 Elongation factor G C-terminus ABO_0382 PF00009 Elongation factor Tu GTP binding domain ABO_0383 PF03143 Elongation factor Tu C-terminal domain ABO_0383 PF00009 Elongation factor Tu GTP binding domain ABO_0383 PF03144 Elongation factor Tu domain 2 ABO_0384 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABO_0384 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABO_0384 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABO_0386 PF07238 PilZ domain ABO_0389 PF03062 MBOAT, membrane-bound O-acyltransferase family ABO_0390 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX ABO_0392 PF16824 C-terminal carbohydrate-binding module ABO_0392 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX ABO_0395 PF01050 Mannose-6-phosphate isomerase ABO_0395 PF00483 Nucleotidyl transferase ABO_0396 PF00338 Ribosomal protein S10p/S20e ABO_0397 PF00297 Ribosomal protein L3 ABO_0398 PF00573 Ribosomal protein L4/L1 family ABO_0399 PF00276 Ribosomal protein L23 ABO_0400 PF03947 Ribosomal Proteins L2, C-terminal domain ABO_0400 PF00181 Ribosomal Proteins L2, RNA binding domain ABO_0401 PF00203 Ribosomal protein S19 ABO_0402 PF00237 Ribosomal protein L22p/L17e ABO_0403 PF07650 KH domain ABO_0403 PF00189 Ribosomal protein S3, C-terminal domain ABO_0404 PF00252 Ribosomal protein L16p/L10e ABO_0405 PF00831 Ribosomal L29 protein ABO_0406 PF00366 Ribosomal protein S17 ABO_0407 PF00238 Ribosomal protein L14p/L23e ABO_0408 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABO_0409 PF00673 ribosomal L5P family C-terminus ABO_0409 PF00281 Ribosomal protein L5 ABO_0410 PF00253 Ribosomal protein S14p/S29e ABO_0411 PF00410 Ribosomal protein S8 ABO_0412 PF00347 Ribosomal protein L6 ABO_0413 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABO_0414 PF03719 Ribosomal protein S5, C-terminal domain ABO_0414 PF00333 Ribosomal protein S5, N-terminal domain ABO_0415 PF00327 Ribosomal protein L30p/L7e ABO_0416 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABO_0417 PF00344 SecY translocase ABO_0418 PF00444 Ribosomal protein L36 ABO_0419 PF00416 Ribosomal protein S13/S18 ABO_0420 PF00411 Ribosomal protein S11 ABO_0421 PF01479 S4 domain ABO_0421 PF00163 Ribosomal protein S4/S9 N-terminal domain ABO_0422 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABO_0422 PF01000 RNA polymerase Rpb3/RpoA insert domain ABO_0422 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABO_0423 PF01196 Ribosomal protein L17 ABO_0427 PF17760 UvrA interaction domain ABO_0427 PF17755 UvrA DNA-binding domain ABO_0428 PF00196 Bacterial regulatory proteins, luxR family ABO_0429 PF07690 Major Facilitator Superfamily ABO_0430 PF00436 Single-strand binding protein family ABO_0432 PF11356 Type II secretion system protein C ABO_0433 PF00263 Bacterial type II and III secretion system protein ABO_0433 PF03958 Bacterial type II/III secretion system short domain ABO_0435 PF00211 Adenylate and Guanylate cyclase catalytic domain ABO_0435 PF00072 Response regulator receiver domain ABO_0436 PF00561 alpha/beta hydrolase fold ABO_0437 PF03814 Potassium-transporting ATPase A subunit ABO_0440 PF00004 ATPase family associated with various cellular activities (AAA) ABO_0440 PF01434 Peptidase family M41 ABO_0440 PF17862 AAA+ lid domain ABO_0442 PF17149 Periplasmic sensor domain found in signal transduction proteins ABO_0442 PF00672 HAMP domain ABO_0442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0442 PF00512 His Kinase A (phospho-acceptor) domain ABO_0442 PF01627 Hpt domain ABO_0442 PF00072 Response regulator receiver domain ABO_0444 PF03109 ABC1 family ABO_0446 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_0446 PF12833 Helix-turn-helix domain ABO_0451 PF00348 Polyprenyl synthetase ABO_0452 PF00829 Ribosomal prokaryotic L21 protein ABO_0453 PF01016 Ribosomal L27 protein ABO_0454 PF01018 GTP1/OBG ABO_0454 PF01926 50S ribosome-binding GTPase ABO_0455 PF01472 PUA domain ABO_0455 PF00696 Amino acid kinase family ABO_0456 PF01649 Ribosomal protein S20 ABO_0457 PF03023 Lipid II flippase MurJ ABO_0458 PF01687 Riboflavin kinase ABO_0458 PF06574 FAD synthetase ABO_0459 PF08264 Anticodon-binding domain of tRNA ABO_0459 PF00133 tRNA synthetases class I (I, L, M and V) ABO_0459 PF06827 Zinc finger found in FPG and IleRS ABO_0460 PF01252 Signal peptidase (SPase) II ABO_0461 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABO_0462 PF02401 LytB protein ABO_0463 PF00114 Pilin (bacterial filament) ABO_0463 PF07963 Prokaryotic N-terminal methylation motif ABO_0470 PF01266 FAD dependent oxidoreductase ABO_0471 PF00072 Response regulator receiver domain ABO_0471 PF02954 Bacterial regulatory protein, Fis family ABO_0471 PF00158 Sigma-54 interaction domain ABO_0472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0472 PF00512 His Kinase A (phospho-acceptor) domain ABO_0474 PF00795 Carbon-nitrogen hydrolase ABO_0474 PF02540 NAD synthase ABO_0475 PF13525 Outer membrane lipoprotein ABO_0476 PF00849 RNA pseudouridylate synthase ABO_0476 PF01479 S4 domain ABO_0479 PF02861 Clp amino terminal domain, pathogenicity island component ABO_0479 PF10431 C-terminal, D2-small domain, of ClpB protein ABO_0479 PF17871 AAA lid domain ABO_0479 PF07724 AAA domain (Cdc48 subfamily) ABO_0479 PF00004 ATPase family associated with various cellular activities (AAA) ABO_0481 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABO_0481 PF00205 Thiamine pyrophosphate enzyme, central domain ABO_0481 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABO_0482 PF10369 Small subunit of acetolactate synthase ABO_0484 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_0484 PF03466 LysR substrate binding domain ABO_0485 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABO_0485 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABO_0486 PF01066 CDP-alcohol phosphatidyltransferase ABO_0488 PF00781 Diacylglycerol kinase catalytic domain ABO_0492 PF10458 Valyl tRNA synthetase tRNA binding arm ABO_0492 PF08264 Anticodon-binding domain of tRNA ABO_0492 PF00133 tRNA synthetases class I (I, L, M and V) ABO_0494 PF04364 DNA polymerase III chi subunit, HolC ABO_0495 PF02789 Cytosol aminopeptidase family, N-terminal domain ABO_0495 PF00883 Cytosol aminopeptidase family, catalytic domain ABO_0496 PF03739 Lipopolysaccharide export system permease LptF/LptG ABO_0497 PF03739 Lipopolysaccharide export system permease LptF/LptG ABO_0500 PF02547 Queuosine biosynthesis protein ABO_0501 PF01702 Queuine tRNA-ribosyltransferase ABO_0502 PF02699 Preprotein translocase subunit ABO_0503 PF02355 Protein export membrane protein ABO_0503 PF07549 SecD/SecF GG Motif ABO_0503 PF13721 SecD export protein N-terminal TM region ABO_0504 PF07549 SecD/SecF GG Motif ABO_0504 PF02355 Protein export membrane protein ABO_0506 PF00155 Aminotransferase class I and II ABO_0507 PF01425 Amidase ABO_0508 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABO_0509 PF00202 Aminotransferase class-III ABO_0510 PF00180 Isocitrate/isopropylmalate dehydrogenase ABO_0511 PF00171 Aldehyde dehydrogenase family ABO_0512 PF00459 Inositol monophosphatase family ABO_0513 PF00588 SpoU rRNA Methylase family ABO_0514 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_0515 PF01926 50S ribosome-binding GTPase ABO_0515 PF06071 Protein of unknown function (DUF933) ABO_0516 PF01195 Peptidyl-tRNA hydrolase ABO_0517 PF14693 Ribosomal protein TL5, C-terminal domain ABO_0517 PF01386 Ribosomal L25p family ABO_0518 PF14572 Phosphoribosyl synthetase-associated domain ABO_0518 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABO_0519 PF00288 GHMP kinases N terminal domain ABO_0519 PF08544 GHMP kinases C terminal ABO_0520 PF03550 Outer membrane lipoprotein LolB ABO_0522 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABO_0522 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABO_0522 PF01488 Shikimate / quinate 5-dehydrogenase ABO_0523 PF03462 PCRF domain ABO_0523 PF00472 RF-1 domain ABO_0524 PF13847 Methyltransferase domain ABO_0524 PF17827 PrmC N-terminal domain ABO_0525 PF00899 ThiF family ABO_0526 PF00378 Enoyl-CoA hydratase/isomerase ABO_0527 PF02637 GatB domain ABO_0527 PF02934 GatB/GatE catalytic domain ABO_0528 PF01425 Amidase ABO_0529 PF02686 Glu-tRNAGln amidotransferase C subunit ABO_0531 PF04085 rod shape-determining protein MreC ABO_0532 PF04093 rod shape-determining protein MreD ABO_0533 PF02545 Maf-like protein ABO_0535 PF00795 Carbon-nitrogen hydrolase ABO_0536 PF01523 Putative modulator of DNA gyrase ABO_0537 PF00005 ABC transporter ABO_0537 PF00027 Cyclic nucleotide-binding domain ABO_0539 PF04751 Protein of unknown function (DUF615) ABO_0540 PF01523 Putative modulator of DNA gyrase ABO_0541 PF01769 Divalent cation transporter ABO_0541 PF00571 CBS domain ABO_0541 PF03448 MgtE intracellular N domain ABO_0542 PF09312 SurA N-terminal domain ABO_0543 PF02665 Nitrate reductase gamma subunit ABO_0544 PF02613 Nitrate reductase delta subunit ABO_0545 PF13247 4Fe-4S dicluster domain ABO_0545 PF14711 Respiratory nitrate reductase beta C-terminal ABO_0546 PF00384 Molybdopterin oxidoreductase ABO_0546 PF01568 Molydopterin dinucleotide binding domain ABO_0546 PF14710 Respiratory nitrate reductase alpha N-terminal ABO_0547 PF07690 Major Facilitator Superfamily ABO_0548 PF00381 PTS HPr component phosphorylation site ABO_0549 PF03668 P-loop ATPase protein family ABO_0550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABO_0551 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABO_0552 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABO_0552 PF04963 Sigma-54 factor, core binding domain ABO_0552 PF04552 Sigma-54, DNA binding domain ABO_0553 PF00005 ABC transporter ABO_0553 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABO_0557 PF01380 SIS domain ABO_0557 PF00571 CBS domain ABO_0560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABO_0561 PF01634 ATP phosphoribosyltransferase ABO_0562 PF00815 Histidinol dehydrogenase ABO_0563 PF00155 Aminotransferase class I and II ABO_0565 PF13180 PDZ domain ABO_0565 PF17820 PDZ domain ABO_0566 PF01784 NIF3 (NGG1p interacting factor 3) ABO_0567 PF00781 Diacylglycerol kinase catalytic domain ABO_0569 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ABO_0570 PF03969 AFG1-like ATPase ABO_0571 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_0571 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_0571 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_0575 PF00248 Aldo/keto reductase family ABO_0576 PF00572 Ribosomal protein L13 ABO_0577 PF00380 Ribosomal protein S9/S16 ABO_0578 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ABO_0578 PF00355 Rieske [2Fe-2S] domain ABO_0579 PF00032 Cytochrome b(C-terminal)/b6/petD ABO_0579 PF00033 Cytochrome b/b6/petB ABO_0580 PF02167 Cytochrome C1 family ABO_0581 PF00043 Glutathione S-transferase, C-terminal domain ABO_0581 PF02798 Glutathione S-transferase, N-terminal domain ABO_0582 PF04386 Stringent starvation protein B ABO_0583 PF04972 BON domain ABO_0584 PF13580 SIS domain ABO_0585 PF02021 Uncharacterised protein family UPF0102 ABO_0586 PF04348 LppC putative lipoprotein ABO_0587 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABO_0588 PF00258 Flavodoxin ABO_0588 PF01613 Flavin reductase like domain ABO_0589 PF02381 MraZ protein, putative antitoxin-like ABO_0590 PF01795 MraW methylase family ABO_0592 PF00905 Penicillin binding protein transpeptidase domain ABO_0592 PF03717 Penicillin-binding Protein dimerisation domain ABO_0593 PF08245 Mur ligase middle domain ABO_0593 PF02875 Mur ligase family, glutamate ligase domain ABO_0593 PF01225 Mur ligase family, catalytic domain ABO_0594 PF08245 Mur ligase middle domain ABO_0594 PF01225 Mur ligase family, catalytic domain ABO_0594 PF02875 Mur ligase family, glutamate ligase domain ABO_0595 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ABO_0595 PF00953 Glycosyl transferase family 4 ABO_0596 PF08245 Mur ligase middle domain ABO_0596 PF02875 Mur ligase family, glutamate ligase domain ABO_0597 PF01098 Cell cycle protein ABO_0598 PF03033 Glycosyltransferase family 28 N-terminal domain ABO_0598 PF04101 Glycosyltransferase family 28 C-terminal domain ABO_0599 PF02875 Mur ligase family, glutamate ligase domain ABO_0599 PF08245 Mur ligase middle domain ABO_0599 PF01225 Mur ligase family, catalytic domain ABO_0600 PF07478 D-ala D-ala ligase C-terminus ABO_0600 PF01820 D-ala D-ala ligase N-terminus ABO_0601 PF03799 Cell division protein FtsQ ABO_0601 PF08478 POTRA domain, FtsQ-type ABO_0602 PF02491 SHS2 domain inserted in FTSA ABO_0603 PF12327 FtsZ family, C-terminal domain ABO_0603 PF00091 Tubulin/FtsZ family, GTPase domain ABO_0604 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABO_0606 PF01476 LysM domain ABO_0606 PF08525 Opacity-associated protein A N-terminal motif ABO_0606 PF01551 Peptidase family M23 ABO_0607 PF01043 SecA preprotein cross-linking domain ABO_0607 PF07516 SecA Wing and Scaffold domain ABO_0607 PF02810 SEC-C motif ABO_0607 PF07517 SecA DEAD-like domain ABO_0608 PF01960 ArgJ family ABO_0609 PF00293 NUDIX domain ABO_0610 PF03884 DNA gyrase inhibitor YacG ABO_0611 PF01121 Dephospho-CoA kinase ABO_0612 PF01478 Type IV leader peptidase family ABO_0612 PF06750 Bacterial Peptidase A24 N-terminal domain ABO_0613 PF00482 Type II secretion system (T2SS), protein F ABO_0614 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABO_0614 PF00437 Type II/IV secretion system protein ABO_0615 PF00114 Pilin (bacterial filament) ABO_0615 PF07963 Prokaryotic N-terminal methylation motif ABO_0617 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABO_0617 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABO_0618 PF01235 Sodium:alanine symporter family ABO_0620 PF01510 N-acetylmuramoyl-L-alanine amidase ABO_0622 PF17831 Pyruvate dehydrogenase E1 component middle domain ABO_0622 PF00456 Transketolase, thiamine diphosphate binding domain ABO_0623 PF02817 e3 binding domain ABO_0623 PF00364 Biotin-requiring enzyme ABO_0623 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABO_0625 PF00486 Transcriptional regulatory protein, C terminal ABO_0625 PF00072 Response regulator receiver domain ABO_0626 PF00672 HAMP domain ABO_0626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0626 PF00512 His Kinase A (phospho-acceptor) domain ABO_0627 PF01923 Cobalamin adenosyltransferase ABO_0628 PF00593 TonB dependent receptor ABO_0628 PF07715 TonB-dependent Receptor Plug Domain ABO_0629 PF02558 Ketopantoate reductase PanE/ApbA ABO_0629 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABO_0630 PF07690 Major Facilitator Superfamily ABO_0631 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABO_0633 PF00166 Chaperonin 10 Kd subunit ABO_0634 PF00118 TCP-1/cpn60 chaperonin family ABO_0635 PF01348 Type II intron maturase ABO_0635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ABO_0638 PF00682 HMGL-like ABO_0638 PF08502 LeuA allosteric (dimerisation) domain ABO_0643 PF16658 Class II release factor RF3, C-terminal domain ABO_0643 PF03144 Elongation factor Tu domain 2 ABO_0643 PF00009 Elongation factor Tu GTP binding domain ABO_0644 PF04237 YjbR ABO_0647 PF00109 Beta-ketoacyl synthase, N-terminal domain ABO_0647 PF02801 Beta-ketoacyl synthase, C-terminal domain ABO_0648 PF02803 Thiolase, C-terminal domain ABO_0648 PF00108 Thiolase, N-terminal domain ABO_0649 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABO_0649 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABO_0654 PF10017 Histidine-specific methyltransferase, SAM-dependent ABO_0655 PF12867 DinB superfamily ABO_0655 PF03781 Sulfatase-modifying factor enzyme 1 ABO_0656 PF00106 short chain dehydrogenase ABO_0657 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ABO_0657 PF03641 Possible lysine decarboxylase ABO_0657 PF11892 Domain of unknown function (DUF3412) ABO_0659 PF00817 impB/mucB/samB family ABO_0659 PF11798 IMS family HHH motif ABO_0660 PF01494 FAD binding domain ABO_0661 PF13847 Methyltransferase domain ABO_0662 PF01638 HxlR-like helix-turn-helix ABO_0665 PF12833 Helix-turn-helix domain ABO_0665 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_0666 PF03176 MMPL family ABO_0668 PF12697 Alpha/beta hydrolase family ABO_0670 PF00175 Oxidoreductase NAD-binding domain ABO_0670 PF00111 2Fe-2S iron-sulfur cluster binding domain ABO_0670 PF00970 Oxidoreductase FAD-binding domain ABO_0671 PF11723 Homotrimeric ring hydroxylase ABO_0671 PF00355 Rieske [2Fe-2S] domain ABO_0672 PF00355 Rieske [2Fe-2S] domain ABO_0672 PF11723 Homotrimeric ring hydroxylase ABO_0675 PF00440 Bacterial regulatory proteins, tetR family ABO_0675 PF18665 Tetracyclin repressor-like, C-terminal domain ABO_0676 PF00296 Luciferase-like monooxygenase ABO_0677 PF01757 Acyltransferase family ABO_0680 PF00311 Phosphoenolpyruvate carboxylase ABO_0684 PF01132 Elongation factor P (EF-P) OB domain ABO_0684 PF08207 Elongation factor P (EF-P) KOW-like domain ABO_0684 PF09285 Elongation factor P, C-terminal ABO_0686 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ABO_0686 PF01694 Rhomboid family ABO_0690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABO_0694 PF00694 Aconitase C-terminal domain ABO_0694 PF00330 Aconitase family (aconitate hydratase) ABO_0695 PF01863 Protein of unknown function DUF45 ABO_0697 PF00999 Sodium/hydrogen exchanger family ABO_0697 PF02080 TrkA-C domain ABO_0697 PF02254 TrkA-N domain ABO_0703 PF00171 Aldehyde dehydrogenase family ABO_0704 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABO_0704 PF00205 Thiamine pyrophosphate enzyme, central domain ABO_0704 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABO_0705 PF07969 Amidohydrolase family ABO_0708 PF00578 AhpC/TSA family ABO_0708 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABO_0710 PF00268 Ribonucleotide reductase, small chain ABO_0711 PF03477 ATP cone domain ABO_0711 PF00317 Ribonucleotide reductase, all-alpha domain ABO_0711 PF02867 Ribonucleotide reductase, barrel domain ABO_0712 PF00072 Response regulator receiver domain ABO_0712 PF00486 Transcriptional regulatory protein, C terminal ABO_0713 PF00512 His Kinase A (phospho-acceptor) domain ABO_0713 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0713 PF00672 HAMP domain ABO_0714 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABO_0714 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABO_0715 PF00990 Diguanylate cyclase, GGDEF domain ABO_0715 PF03707 Bacterial signalling protein N terminal repeat ABO_0715 PF00563 EAL domain ABO_0716 PF00072 Response regulator receiver domain ABO_0716 PF00990 Diguanylate cyclase, GGDEF domain ABO_0717 PF00005 ABC transporter ABO_0717 PF08402 TOBE domain ABO_0718 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABO_0718 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABO_0719 PF00202 Aminotransferase class-III ABO_0720 PF02538 Hydantoinase B/oxoprolinase ABO_0722 PF00462 Glutaredoxin ABO_0723 PF00578 AhpC/TSA family ABO_0723 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABO_0724 PF00929 Exonuclease ABO_0725 PF00764 Arginosuccinate synthase ABO_0726 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABO_0727 PF18030 RimK PreATP-grasp domain ABO_0727 PF08443 RimK-like ATP-grasp domain ABO_0728 PF08443 RimK-like ATP-grasp domain ABO_0728 PF18030 RimK PreATP-grasp domain ABO_0730 PF01747 ATP-sulfurylase ABO_0730 PF14306 PUA-like domain ABO_0734 PF00271 Helicase conserved C-terminal domain ABO_0734 PF00270 DEAD/DEAH box helicase ABO_0735 PF00271 Helicase conserved C-terminal domain ABO_0735 PF09382 RQC domain ABO_0735 PF16124 RecQ zinc-binding ABO_0735 PF00570 HRDC domain ABO_0735 PF00270 DEAD/DEAH box helicase ABO_0737 PF13614 AAA domain ABO_0739 PF03129 Anticodon binding domain ABO_0739 PF04073 Aminoacyl-tRNA editing domain ABO_0739 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABO_0741 PF04357 TamB, inner membrane protein subunit of TAM complex ABO_0742 PF01103 Surface antigen ABO_0742 PF17243 POTRA domain TamA domain 1 ABO_0742 PF07244 Surface antigen variable number repeat ABO_0743 PF00072 Response regulator receiver domain ABO_0745 PF01209 ubiE/COQ5 methyltransferase family ABO_0748 PF00216 Bacterial DNA-binding protein ABO_0749 PF02938 GAD domain ABO_0749 PF00152 tRNA synthetases class II (D, K and N) ABO_0749 PF01336 OB-fold nucleic acid binding domain ABO_0750 PF01709 Transcriptional regulator ABO_0751 PF02075 Crossover junction endodeoxyribonuclease RuvC ABO_0752 PF07499 RuvA, C-terminal domain ABO_0752 PF01330 RuvA N terminal domain ABO_0753 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABO_0753 PF05491 RuvB C-terminal winged helix domain ABO_0753 PF17864 RuvB AAA lid domain ABO_0754 PF03061 Thioesterase superfamily ABO_0755 PF01618 MotA/TolQ/ExbB proton channel family ABO_0756 PF02472 Biopolymer transport protein ExbD/TolR ABO_0758 PF04052 TolB amino-terminal domain ABO_0758 PF07676 WD40-like Beta Propeller Repeat ABO_0759 PF00691 OmpA family ABO_0761 PF04055 Radical SAM superfamily ABO_0762 PF06508 Queuosine biosynthesis protein QueC ABO_0765 PF13411 MerR HTH family regulatory protein ABO_0766 PF03441 FAD binding domain of DNA photolyase ABO_0766 PF00875 DNA photolyase ABO_0767 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABO_0767 PF01266 FAD dependent oxidoreductase ABO_0770 PF02445 Quinolinate synthetase A protein ABO_0771 PF13181 Tetratricopeptide repeat ABO_0771 PF01435 Peptidase family M48 ABO_0772 PF01206 Sulfurtransferase TusA ABO_0773 PF01594 AI-2E family transporter ABO_0774 PF00578 AhpC/TSA family ABO_0775 PF01842 ACT domain ABO_0776 PF00701 Dihydrodipicolinate synthetase family ABO_0778 PF00753 Metallo-beta-lactamase superfamily ABO_0779 PF01259 SAICAR synthetase ABO_0784 PF01464 Transglycosylase SLT domain ABO_0784 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABO_0785 PF02769 AIR synthase related protein, C-terminal domain ABO_0785 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABO_0785 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABO_0787 PF01784 NIF3 (NGG1p interacting factor 3) ABO_0788 PF09297 NADH pyrophosphatase zinc ribbon domain ABO_0788 PF00293 NUDIX domain ABO_0789 PF00196 Bacterial regulatory proteins, luxR family ABO_0791 PF00293 NUDIX domain ABO_0792 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_0794 PF01734 Patatin-like phospholipase ABO_0795 PF03471 Transporter associated domain ABO_0795 PF00571 CBS domain ABO_0795 PF01595 Cyclin M transmembrane N-terminal domain ABO_0797 PF00448 SRP54-type protein, GTPase domain ABO_0797 PF02881 SRP54-type protein, helical bundle domain ABO_0797 PF02978 Signal peptide binding domain ABO_0798 PF00886 Ribosomal protein S16 ABO_0799 PF05239 PRC-barrel domain ABO_0799 PF01782 RimM N-terminal domain ABO_0800 PF01746 tRNA (Guanine-1)-methyltransferase ABO_0801 PF01245 Ribosomal protein L19 ABO_0802 PF04226 Transglycosylase associated protein ABO_0803 PF00589 Phage integrase family ABO_0803 PF02899 Phage integrase, N-terminal SAM-like domain ABO_0804 PF13098 Thioredoxin-like domain ABO_0804 PF10411 Disulfide bond isomerase protein N-terminus ABO_0805 PF00155 Aminotransferase class I and II ABO_0806 PF00742 Homoserine dehydrogenase ABO_0806 PF03447 Homoserine dehydrogenase, NAD binding domain ABO_0806 PF01842 ACT domain ABO_0807 PF00291 Pyridoxal-phosphate dependent enzyme ABO_0808 PF02028 BCCT, betaine/carnitine/choline family transporter ABO_0812 PF02515 CoA-transferase family III ABO_0813 PF12105 SpoU, rRNA methylase, C-terminal ABO_0813 PF00588 SpoU rRNA Methylase family ABO_0815 PF00595 PDZ domain ABO_0815 PF13180 PDZ domain ABO_0817 PF08659 KR domain ABO_0817 PF00109 Beta-ketoacyl synthase, N-terminal domain ABO_0817 PF00550 Phosphopantetheine attachment site ABO_0817 PF14765 Polyketide synthase dehydratase ABO_0817 PF16197 Ketoacyl-synthetase C-terminal extension ABO_0817 PF02801 Beta-ketoacyl synthase, C-terminal domain ABO_0817 PF08240 Alcohol dehydrogenase GroES-like domain ABO_0817 PF00698 Acyl transferase domain ABO_0817 PF08990 Erythronolide synthase docking ABO_0820 PF02222 ATP-grasp domain ABO_0821 PF14437 MafB19-like deaminase ABO_0822 PF00691 OmpA family ABO_0822 PF05736 OprF membrane domain ABO_0823 PF00563 EAL domain ABO_0823 PF00990 Diguanylate cyclase, GGDEF domain ABO_0829 PF00512 His Kinase A (phospho-acceptor) domain ABO_0829 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0829 PF00672 HAMP domain ABO_0831 PF00486 Transcriptional regulatory protein, C terminal ABO_0831 PF00072 Response regulator receiver domain ABO_0832 PF12833 Helix-turn-helix domain ABO_0832 PF01965 DJ-1/PfpI family ABO_0833 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_0833 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_0833 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABO_0833 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_0834 PF00109 Beta-ketoacyl synthase, N-terminal domain ABO_0834 PF02801 Beta-ketoacyl synthase, C-terminal domain ABO_0835 PF07977 FabA-like domain ABO_0836 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ABO_0836 PF01578 Cytochrome C assembly protein ABO_0837 PF08534 Redoxin ABO_0838 PF03918 Cytochrome C biogenesis protein ABO_0840 PF05191 Adenylate kinase, active site lid ABO_0842 PF00210 Ferritin-like domain ABO_0843 PF04277 Oxaloacetate decarboxylase, gamma chain ABO_0844 PF00364 Biotin-requiring enzyme ABO_0844 PF02436 Conserved carboxylase domain ABO_0844 PF00682 HMGL-like ABO_0845 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ABO_0850 PF06779 Uncharacterised MFS-type transporter YbfB ABO_0851 PF00005 ABC transporter ABO_0852 PF00528 Binding-protein-dependent transport system inner membrane component ABO_0853 PF00005 ABC transporter ABO_0855 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_0855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABO_0855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABO_0855 PF04324 BFD-like [2Fe-2S] binding domain ABO_0855 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABO_0859 PF03861 ANTAR domain ABO_0859 PF08376 Nitrate and nitrite sensing ABO_0860 PF00005 ABC transporter ABO_0861 PF08267 Cobalamin-independent synthase, N-terminal domain ABO_0861 PF01717 Cobalamin-independent synthase, Catalytic domain ABO_0862 PF03466 LysR substrate binding domain ABO_0862 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_0864 PF07308 Protein of unknown function (DUF1456) ABO_0870 PF00005 ABC transporter ABO_0871 PF03379 CcmB protein ABO_0872 PF01578 Cytochrome C assembly protein ABO_0873 PF04995 Heme exporter protein D (CcmD) ABO_0874 PF03100 CcmE ABO_0875 PF18030 RimK PreATP-grasp domain ABO_0875 PF08443 RimK-like ATP-grasp domain ABO_0876 PF02798 Glutathione S-transferase, N-terminal domain ABO_0878 PF00005 ABC transporter ABO_0879 PF01061 ABC-2 type transporter ABO_0880 PF14489 QueF-like protein ABO_0880 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABO_0881 PF03806 AbgT putative transporter family ABO_0884 PF00881 Nitroreductase family ABO_0885 PF00211 Adenylate and Guanylate cyclase catalytic domain ABO_0886 PF05199 GMC oxidoreductase ABO_0886 PF00732 GMC oxidoreductase ABO_0895 PF17102 Stealth protein CR3, conserved region 3 ABO_0895 PF11380 Stealth protein CR2, conserved region 2 ABO_0895 PF17101 Stealth protein CR1, conserved region 1 ABO_0895 PF17103 Stealth protein CR4, conserved region 4 ABO_0895 PF00534 Glycosyl transferases group 1 ABO_0900 PF00912 Transglycosylase ABO_0900 PF06832 Penicillin-Binding Protein C-terminus Family ABO_0900 PF00905 Penicillin binding protein transpeptidase domain ABO_0901 PF01568 Molydopterin dinucleotide binding domain ABO_0901 PF00384 Molybdopterin oxidoreductase ABO_0901 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABO_0904 PF14052 Capsule assembly protein Wzi ABO_0905 PF02563 Polysaccharide biosynthesis/export protein ABO_0905 PF10531 SLBB domain ABO_0905 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABO_0906 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABO_0907 PF13614 AAA domain ABO_0907 PF13807 G-rich domain on putative tyrosine kinase ABO_0907 PF02706 Chain length determinant protein ABO_0908 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABO_0908 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABO_0908 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABO_0909 PF01370 NAD dependent epimerase/dehydratase family ABO_0910 PF16363 GDP-mannose 4,6 dehydratase ABO_0911 PF04321 RmlD substrate binding domain ABO_0913 PF00483 Nucleotidyl transferase ABO_0914 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABO_0917 PF01757 Acyltransferase family ABO_0918 PF02709 N-terminal domain of galactosyltransferase ABO_0918 PF00535 Glycosyl transferase family 2 ABO_0919 PF13439 Glycosyltransferase Family 4 ABO_0919 PF00534 Glycosyl transferases group 1 ABO_0920 PF13439 Glycosyltransferase Family 4 ABO_0920 PF00534 Glycosyl transferases group 1 ABO_0921 PF00534 Glycosyl transferases group 1 ABO_0921 PF13439 Glycosyltransferase Family 4 ABO_0924 PF13477 Glycosyl transferase 4-like ABO_0924 PF00534 Glycosyl transferases group 1 ABO_0925 PF02397 Bacterial sugar transferase ABO_0927 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABO_0928 PF02719 Polysaccharide biosynthesis protein ABO_0929 PF02080 TrkA-C domain ABO_0929 PF03600 Citrate transporter ABO_0931 PF10996 Beta-Casp domain ABO_0931 PF00753 Metallo-beta-lactamase superfamily ABO_0931 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABO_0932 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABO_0932 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABO_0932 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABO_0934 PF00483 Nucleotidyl transferase ABO_0935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABO_0935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABO_0935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABO_0936 PF00342 Phosphoglucose isomerase ABO_0937 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABO_0937 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABO_0937 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABO_0937 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABO_0938 PF16363 GDP-mannose 4,6 dehydratase ABO_0941 PF00535 Glycosyl transferase family 2 ABO_0943 PF02397 Bacterial sugar transferase ABO_0944 PF00155 Aminotransferase class I and II ABO_0945 PF12344 Ultra-violet resistance protein B ABO_0945 PF04851 Type III restriction enzyme, res subunit ABO_0945 PF02151 UvrB/uvrC motif ABO_0945 PF00271 Helicase conserved C-terminal domain ABO_0945 PF17757 UvrB interaction domain ABO_0947 PF02463 RecF/RecN/SMC N terminal domain ABO_0948 PF04354 ZipA, C-terminal FtsZ-binding domain ABO_0949 PF12826 Helix-hairpin-helix motif ABO_0949 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABO_0949 PF00533 BRCA1 C Terminus (BRCT) domain ABO_0949 PF01653 NAD-dependent DNA ligase adenylation domain ABO_0949 PF03120 NAD-dependent DNA ligase OB-fold domain ABO_0953 PF00793 DAHP synthetase I family ABO_0954 PF00106 short chain dehydrogenase ABO_0955 PF01575 MaoC like domain ABO_0957 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_0957 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_0957 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_0962 PF00171 Aldehyde dehydrogenase family ABO_0963 PF02321 Outer membrane efflux protein ABO_0964 PF00873 AcrB/AcrD/AcrF family ABO_0965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_0965 PF00529 HlyD membrane-fusion protein of T1SS ABO_0966 PF00440 Bacterial regulatory proteins, tetR family ABO_0966 PF08361 MAATS-type transcriptional repressor, C-terminal region ABO_0967 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABO_0967 PF02558 Ketopantoate reductase PanE/ApbA ABO_0969 PF01124 MAPEG family ABO_0970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABO_0970 PF01266 FAD dependent oxidoreductase ABO_0972 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABO_0972 PF00672 HAMP domain ABO_0972 PF00072 Response regulator receiver domain ABO_0972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_0972 PF00512 His Kinase A (phospho-acceptor) domain ABO_0972 PF01627 Hpt domain ABO_0973 PF13649 Methyltransferase domain ABO_0974 PF08003 Protein of unknown function (DUF1698) ABO_0980 PF08659 KR domain ABO_0980 PF02801 Beta-ketoacyl synthase, C-terminal domain ABO_0980 PF00550 Phosphopantetheine attachment site ABO_0980 PF14765 Polyketide synthase dehydratase ABO_0980 PF16197 Ketoacyl-synthetase C-terminal extension ABO_0980 PF00107 Zinc-binding dehydrogenase ABO_0980 PF00109 Beta-ketoacyl synthase, N-terminal domain ABO_0980 PF08240 Alcohol dehydrogenase GroES-like domain ABO_0980 PF00698 Acyl transferase domain ABO_0983 PF00108 Thiolase, N-terminal domain ABO_0983 PF02803 Thiolase, C-terminal domain ABO_0984 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_0984 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_0984 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_0985 PF00501 AMP-binding enzyme ABO_0985 PF13193 AMP-binding enzyme C-terminal domain ABO_0986 PF00364 Biotin-requiring enzyme ABO_0986 PF02785 Biotin carboxylase C-terminal domain ABO_0986 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABO_0986 PF00289 Biotin carboxylase, N-terminal domain ABO_0988 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_0988 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_0988 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_0989 PF01039 Carboxyl transferase domain ABO_0992 PF17932 Tetracyclin repressor-like, C-terminal domain ABO_0992 PF00440 Bacterial regulatory proteins, tetR family ABO_0994 PF00027 Cyclic nucleotide-binding domain ABO_0994 PF07885 Ion channel ABO_0995 PF01513 ATP-NAD kinase ABO_0997 PF12262 Bacterial virulence factor lipase N-terminal ABO_0998 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABO_0998 PF01433 Peptidase family M1 domain ABO_0998 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABO_1000 PF07044 Protein of unknown function (DUF1329) ABO_1003 PF01180 Dihydroorotate dehydrogenase ABO_1004 PF04957 Ribosome modulation factor ABO_1005 PF01170 Putative RNA methylase family UPF0020 ABO_1005 PF10672 S-adenosylmethionine-dependent methyltransferase ABO_1007 PF01026 TatD related DNase ABO_1009 PF00717 Peptidase S24-like ABO_1009 PF01726 LexA DNA binding domain ABO_1011 PF00582 Universal stress protein family ABO_1012 PF01396 Topoisomerase DNA binding C4 zinc finger ABO_1012 PF01751 Toprim domain ABO_1012 PF08272 Topoisomerase I zinc-ribbon-like ABO_1012 PF01131 DNA topoisomerase ABO_1017 PF03734 L,D-transpeptidase catalytic domain ABO_1017 PF17969 L,D-transpeptidase C-terminal domain ABO_1018 PF00933 Glycosyl hydrolase family 3 N terminal domain ABO_1019 PF00924 Mechanosensitive ion channel ABO_1020 PF11734 TilS substrate C-terminal domain ABO_1020 PF00156 Phosphoribosyl transferase domain ABO_1020 PF01171 PP-loop family ABO_1021 PF01048 Phosphorylase superfamily ABO_1022 PF01595 Cyclin M transmembrane N-terminal domain ABO_1022 PF00571 CBS domain ABO_1023 PF00291 Pyridoxal-phosphate dependent enzyme ABO_1026 PF00106 short chain dehydrogenase ABO_1028 PF02559 CarD-like/TRCF domain ABO_1028 PF00271 Helicase conserved C-terminal domain ABO_1028 PF17757 UvrB interaction domain ABO_1028 PF03461 TRCF domain ABO_1028 PF00270 DEAD/DEAH box helicase ABO_1030 PF03167 Uracil DNA glycosylase superfamily ABO_1031 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABO_1031 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABO_1032 PF11973 NQRA C-terminal domain ABO_1032 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ABO_1033 PF03116 NQR2, RnfD, RnfE family ABO_1034 PF04205 FMN-binding domain ABO_1035 PF02508 Rnf-Nqr subunit, membrane protein ABO_1036 PF02508 Rnf-Nqr subunit, membrane protein ABO_1037 PF00970 Oxidoreductase FAD-binding domain ABO_1037 PF00111 2Fe-2S iron-sulfur cluster binding domain ABO_1037 PF00175 Oxidoreductase NAD-binding domain ABO_1038 PF02424 ApbE family ABO_1042 PF03009 Glycerophosphoryl diester phosphodiesterase family ABO_1044 PF13579 Glycosyl transferase 4-like domain ABO_1044 PF00534 Glycosyl transferases group 1 ABO_1046 PF00795 Carbon-nitrogen hydrolase ABO_1047 PF04371 Porphyromonas-type peptidyl-arginine deiminase ABO_1049 PF12704 MacB-like periplasmic core domain ABO_1049 PF02687 FtsX-like permease family ABO_1050 PF00005 ABC transporter ABO_1052 PF03772 Competence protein ABO_1052 PF00753 Metallo-beta-lactamase superfamily ABO_1053 PF01618 MotA/TolQ/ExbB proton channel family ABO_1054 PF02472 Biopolymer transport protein ExbD/TolR ABO_1055 PF00005 ABC transporter ABO_1055 PF00664 ABC transporter transmembrane region ABO_1056 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABO_1057 PF02348 Cytidylyltransferase ABO_1058 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABO_1059 PF01565 FAD binding domain ABO_1059 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABO_1060 PF00575 S1 RNA binding domain ABO_1060 PF10150 Ribonuclease E/G family ABO_1060 PF12111 Polyribonucleotide phosphorylase C terminal ABO_1061 PF00849 RNA pseudouridylate synthase ABO_1061 PF01479 S4 domain ABO_1062 PF13419 Haloacid dehalogenase-like hydrolase ABO_1063 PF06965 Na+/H+ antiporter 1 ABO_1063 PF01343 Peptidase family S49 ABO_1064 PF02545 Maf-like protein ABO_1065 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABO_1066 PF01783 Ribosomal L32p protein family ABO_1067 PF02504 Fatty acid synthesis protein ABO_1068 PF00698 Acyl transferase domain ABO_1070 PF00550 Phosphopantetheine attachment site ABO_1071 PF02801 Beta-ketoacyl synthase, C-terminal domain ABO_1071 PF00109 Beta-ketoacyl synthase, N-terminal domain ABO_1073 PF02618 YceG-like family ABO_1074 PF02223 Thymidylate kinase ABO_1075 PF09115 DNA polymerase III, delta subunit, C terminal ABO_1077 PF01026 TatD related DNase ABO_1078 PF02646 RmuC family ABO_1081 PF00266 Aminotransferase class-V ABO_1082 PF00440 Bacterial regulatory proteins, tetR family ABO_1084 PF00069 Protein kinase domain ABO_1084 PF03793 PASTA domain ABO_1085 PF07690 Major Facilitator Superfamily ABO_1086 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABO_1086 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABO_1086 PF04324 BFD-like [2Fe-2S] binding domain ABO_1086 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABO_1086 PF13806 Rieske-like [2Fe-2S] domain ABO_1086 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1087 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABO_1087 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABO_1087 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABO_1087 PF04324 BFD-like [2Fe-2S] binding domain ABO_1087 PF13806 Rieske-like [2Fe-2S] domain ABO_1087 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1088 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABO_1088 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABO_1088 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABO_1088 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1088 PF04324 BFD-like [2Fe-2S] binding domain ABO_1089 PF01568 Molydopterin dinucleotide binding domain ABO_1089 PF04324 BFD-like [2Fe-2S] binding domain ABO_1089 PF00384 Molybdopterin oxidoreductase ABO_1089 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABO_1091 PF00027 Cyclic nucleotide-binding domain ABO_1091 PF00520 Ion transport protein ABO_1092 PF00793 DAHP synthetase I family ABO_1093 PF02146 Sir2 family ABO_1095 PF00795 Carbon-nitrogen hydrolase ABO_1095 PF00583 Acetyltransferase (GNAT) family ABO_1097 PF00743 Flavin-binding monooxygenase-like ABO_1098 PF00849 RNA pseudouridylate synthase ABO_1098 PF01479 S4 domain ABO_1099 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_1099 PF03466 LysR substrate binding domain ABO_1101 PF01012 Electron transfer flavoprotein domain ABO_1102 PF01012 Electron transfer flavoprotein domain ABO_1102 PF00766 Electron transfer flavoprotein FAD-binding domain ABO_1103 PF00106 short chain dehydrogenase ABO_1106 PF14403 Circularly permuted ATP-grasp type 2 ABO_1107 PF14403 Circularly permuted ATP-grasp type 2 ABO_1107 PF04168 A predicted alpha-helical domain with a conserved ER motif. ABO_1108 PF08379 Bacterial transglutaminase-like N-terminal region ABO_1108 PF01841 Transglutaminase-like superfamily ABO_1110 PF00884 Sulfatase ABO_1118 PF03776 Septum formation topological specificity factor MinE ABO_1119 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABO_1120 PF03775 Septum formation inhibitor MinC, C-terminal domain ABO_1120 PF05209 Septum formation inhibitor MinC, N-terminal domain ABO_1121 PF09317 Domain of unknown function (DUF1974) ABO_1121 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_1121 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_1121 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_1122 PF00085 Thioredoxin ABO_1123 PF00543 Nitrogen regulatory protein P-II ABO_1124 PF00909 Ammonium Transporter Family ABO_1126 PF12804 MobA-like NTP transferase domain ABO_1127 PF06733 DEAD_2 ABO_1127 PF13307 Helicase C-terminal domain ABO_1128 PF00814 Glycoprotease family ABO_1130 PF02673 Bacitracin resistance protein BacA ABO_1131 PF04445 Putative SAM-dependent methyltransferase ABO_1132 PF01553 Acyltransferase ABO_1134 PF00171 Aldehyde dehydrogenase family ABO_1136 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_1136 PF00529 HlyD membrane-fusion protein of T1SS ABO_1137 PF07687 Peptidase dimerisation domain ABO_1137 PF01546 Peptidase family M20/M25/M40 ABO_1138 PF14602 Hexapeptide repeat of succinyl-transferase ABO_1138 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ABO_1139 PF03960 ArsC family ABO_1140 PF00155 Aminotransferase class I and II ABO_1141 PF01909 Nucleotidyltransferase domain ABO_1141 PF01842 ACT domain ABO_1141 PF08335 GlnD PII-uridylyltransferase ABO_1141 PF01966 HD domain ABO_1142 PF00557 Metallopeptidase family M24 ABO_1143 PF00318 Ribosomal protein S2 ABO_1144 PF00889 Elongation factor TS ABO_1145 PF00696 Amino acid kinase family ABO_1146 PF01765 Ribosome recycling factor ABO_1147 PF01255 Putative undecaprenyl diphosphate synthase ABO_1149 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABO_1149 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABO_1149 PF13288 DXP reductoisomerase C-terminal domain ABO_1150 PF13180 PDZ domain ABO_1150 PF02163 Peptidase family M50 ABO_1150 PF17820 PDZ domain ABO_1151 PF07244 Surface antigen variable number repeat ABO_1151 PF01103 Surface antigen ABO_1153 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABO_1153 PF14602 Hexapeptide repeat of succinyl-transferase ABO_1153 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_1154 PF07977 FabA-like domain ABO_1155 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABO_1155 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_1156 PF02684 Lipid-A-disaccharide synthetase ABO_1157 PF01351 Ribonuclease HII ABO_1158 PF14579 Helix-hairpin-helix motif ABO_1158 PF02811 PHP domain ABO_1158 PF01336 OB-fold nucleic acid binding domain ABO_1158 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABO_1158 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABO_1159 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABO_1160 PF01171 PP-loop family ABO_1160 PF11734 TilS substrate C-terminal domain ABO_1160 PF09179 TilS substrate binding domain ABO_1161 PF00270 DEAD/DEAH box helicase ABO_1161 PF00570 HRDC domain ABO_1161 PF00271 Helicase conserved C-terminal domain ABO_1161 PF09382 RQC domain ABO_1161 PF16124 RecQ zinc-binding ABO_1162 PF06418 CTP synthase N-terminus ABO_1162 PF00117 Glutamine amidotransferase class-I ABO_1163 PF00793 DAHP synthetase I family ABO_1164 PF00113 Enolase, C-terminal TIM barrel domain ABO_1164 PF03952 Enolase, N-terminal domain ABO_1165 PF04977 Septum formation initiator ABO_1166 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABO_1167 PF02542 YgbB family ABO_1168 PF01142 tRNA pseudouridine synthase D (TruD) ABO_1171 PF01476 LysM domain ABO_1171 PF01551 Peptidase family M23 ABO_1172 PF01545 Cation efflux family ABO_1172 PF16916 Dimerisation domain of Zinc Transporter ABO_1174 PF00732 GMC oxidoreductase ABO_1174 PF05199 GMC oxidoreductase ABO_1175 PF00465 Iron-containing alcohol dehydrogenase ABO_1176 PF03061 Thioesterase superfamily ABO_1177 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABO_1177 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABO_1180 PF01435 Peptidase family M48 ABO_1181 PF17785 PUA-like domain ABO_1181 PF10672 S-adenosylmethionine-dependent methyltransferase ABO_1183 PF00155 Aminotransferase class I and II ABO_1185 PF03239 Iron permease FTR1 family ABO_1186 PF01544 CorA-like Mg2+ transporter protein ABO_1188 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABO_1188 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABO_1190 PF01521 Iron-sulphur cluster biosynthesis ABO_1190 PF01106 NifU-like domain ABO_1191 PF01435 Peptidase family M48 ABO_1192 PF03109 ABC1 family ABO_1194 PF00849 RNA pseudouridylate synthase ABO_1195 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABO_1195 PF05362 Lon protease (S16) C-terminal proteolytic domain ABO_1195 PF00004 ATPase family associated with various cellular activities (AAA) ABO_1197 PF00561 alpha/beta hydrolase fold ABO_1197 PF00364 Biotin-requiring enzyme ABO_1200 PF01161 Phosphatidylethanolamine-binding protein ABO_1201 PF00330 Aconitase family (aconitate hydratase) ABO_1201 PF06434 Aconitate hydratase 2 N-terminus ABO_1201 PF11791 Aconitate B N-terminal domain ABO_1203 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABO_1204 PF00149 Calcineurin-like phosphoesterase ABO_1205 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABO_1206 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABO_1207 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABO_1207 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABO_1208 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABO_1208 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABO_1209 PF05698 Bacterial trigger factor protein (TF) C-terminus ABO_1209 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABO_1209 PF05697 Bacterial trigger factor protein (TF) ABO_1210 PF00574 Clp protease ABO_1211 PF06689 ClpX C4-type zinc finger ABO_1211 PF10431 C-terminal, D2-small domain, of ClpB protein ABO_1211 PF07724 AAA domain (Cdc48 subfamily) ABO_1212 PF05362 Lon protease (S16) C-terminal proteolytic domain ABO_1212 PF00004 ATPase family associated with various cellular activities (AAA) ABO_1212 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABO_1213 PF00216 Bacterial DNA-binding protein ABO_1214 PF13145 PPIC-type PPIASE domain ABO_1216 PF00005 ABC transporter ABO_1216 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABO_1217 PF12911 N-terminal TM domain of oligopeptide transport permease C ABO_1217 PF00528 Binding-protein-dependent transport system inner membrane component ABO_1218 PF00528 Binding-protein-dependent transport system inner membrane component ABO_1219 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABO_1220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABO_1221 PF01464 Transglycosylase SLT domain ABO_1221 PF01476 LysM domain ABO_1222 PF00753 Metallo-beta-lactamase superfamily ABO_1222 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABO_1224 PF00075 RNase H ABO_1225 PF00929 Exonuclease ABO_1226 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ABO_1228 PF00293 NUDIX domain ABO_1228 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ABO_1228 PF09297 NADH pyrophosphatase zinc ribbon domain ABO_1230 PF08496 Peptidase family S49 N-terminal ABO_1230 PF01343 Peptidase family S49 ABO_1231 PF08240 Alcohol dehydrogenase GroES-like domain ABO_1231 PF00107 Zinc-binding dehydrogenase ABO_1232 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABO_1232 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABO_1233 PF01261 Xylose isomerase-like TIM barrel ABO_1234 PF00226 DnaJ domain ABO_1234 PF05099 Tellurite resistance protein TerB ABO_1236 PF00501 AMP-binding enzyme ABO_1236 PF13193 AMP-binding enzyme C-terminal domain ABO_1237 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABO_1237 PF02785 Biotin carboxylase C-terminal domain ABO_1237 PF00364 Biotin-requiring enzyme ABO_1237 PF00289 Biotin carboxylase, N-terminal domain ABO_1238 PF00378 Enoyl-CoA hydratase/isomerase ABO_1239 PF01039 Carboxyl transferase domain ABO_1240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_1240 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_1240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_1241 PF00376 MerR family regulatory protein ABO_1241 PF09278 MerR, DNA binding ABO_1243 PF00072 Response regulator receiver domain ABO_1243 PF00672 HAMP domain ABO_1243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1243 PF00512 His Kinase A (phospho-acceptor) domain ABO_1243 PF01627 Hpt domain ABO_1243 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABO_1244 PF13460 NAD(P)H-binding ABO_1245 PF03737 Aldolase/RraA ABO_1248 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABO_1248 PF00056 lactate/malate dehydrogenase, NAD binding domain ABO_1249 PF01494 FAD binding domain ABO_1250 PF12833 Helix-turn-helix domain ABO_1250 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_1251 PF00135 Carboxylesterase family ABO_1252 PF01722 BolA-like protein ABO_1255 PF00528 Binding-protein-dependent transport system inner membrane component ABO_1256 PF03459 TOBE domain ABO_1256 PF00005 ABC transporter ABO_1259 PF00732 GMC oxidoreductase ABO_1259 PF05199 GMC oxidoreductase ABO_1262 PF05230 MASE2 domain ABO_1262 PF00990 Diguanylate cyclase, GGDEF domain ABO_1263 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_1263 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_1263 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_1264 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_1264 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_1264 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_1265 PF00106 short chain dehydrogenase ABO_1266 PF01171 PP-loop family ABO_1267 PF01274 Malate synthase ABO_1269 PF02390 Putative methyltransferase ABO_1272 PF08007 Cupin superfamily protein ABO_1273 PF08328 Adenylosuccinate lyase C-terminal ABO_1273 PF00206 Lyase ABO_1274 PF04356 Protein of unknown function (DUF489) ABO_1276 PF00293 NUDIX domain ABO_1277 PF01967 MoaC family ABO_1278 PF02597 ThiS family ABO_1279 PF02391 MoaE protein ABO_1280 PF00849 RNA pseudouridylate synthase ABO_1281 PF03971 Monomeric isocitrate dehydrogenase ABO_1282 PF00180 Isocitrate/isopropylmalate dehydrogenase ABO_1283 PF00313 'Cold-shock' DNA-binding domain ABO_1284 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABO_1285 PF00004 ATPase family associated with various cellular activities (AAA) ABO_1285 PF07724 AAA domain (Cdc48 subfamily) ABO_1285 PF17871 AAA lid domain ABO_1285 PF02861 Clp amino terminal domain, pathogenicity island component ABO_1285 PF10431 C-terminal, D2-small domain, of ClpB protein ABO_1286 PF01176 Translation initiation factor 1A / IF-1 ABO_1287 PF04377 Arginine-tRNA-protein transferase, C terminus ABO_1287 PF04376 Arginine-tRNA-protein transferase, N terminus ABO_1288 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABO_1289 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1290 PF09397 Ftsk gamma domain ABO_1290 PF01580 FtsK/SpoIIIE family ABO_1290 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABO_1290 PF17854 FtsK alpha domain ABO_1291 PF03548 Outer membrane lipoprotein carrier protein LolA ABO_1292 PF16193 AAA C-terminal domain ABO_1292 PF00004 ATPase family associated with various cellular activities (AAA) ABO_1292 PF12002 MgsA AAA+ ATPase C terminal ABO_1293 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABO_1294 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABO_1294 PF02403 Seryl-tRNA synthetase N-terminal domain ABO_1295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABO_1295 PF10414 Sirohaem synthase dimerisation region ABO_1295 PF14824 Sirohaem biosynthesis protein central ABO_1296 PF02885 Glycosyl transferase family, helical bundle domain ABO_1296 PF00591 Glycosyl transferase family, a/b domain ABO_1299 PF02635 DsrE/DsrF-like family ABO_1300 PF01027 Inhibitor of apoptosis-promoting Bax1 ABO_1301 PF02374 Anion-transporting ATPase ABO_1303 PF13722 5TM C-terminal transporter carbon starvation CstA ABO_1303 PF02554 Carbon starvation protein CstA ABO_1304 PF00196 Bacterial regulatory proteins, luxR family ABO_1304 PF00072 Response regulator receiver domain ABO_1305 PF02151 UvrB/uvrC motif ABO_1305 PF08459 UvrC Helix-hairpin-helix N-terminal ABO_1305 PF01541 GIY-YIG catalytic domain ABO_1305 PF12826 Helix-hairpin-helix motif ABO_1306 PF01066 CDP-alcohol phosphatidyltransferase ABO_1307 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1307 PF00512 His Kinase A (phospho-acceptor) domain ABO_1307 PF09308 LuxQ, periplasmic ABO_1307 PF00072 Response regulator receiver domain ABO_1308 PF03705 CheR methyltransferase, all-alpha domain ABO_1308 PF01739 CheR methyltransferase, SAM binding domain ABO_1309 PF00072 Response regulator receiver domain ABO_1310 PF01339 CheB methylesterase ABO_1311 PF00072 Response regulator receiver domain ABO_1312 PF00437 Type II/IV secretion system protein ABO_1313 PF00482 Type II secretion system (T2SS), protein F ABO_1314 PF07963 Prokaryotic N-terminal methylation motif ABO_1314 PF08334 Type II secretion system (T2SS), protein G ABO_1315 PF07963 Prokaryotic N-terminal methylation motif ABO_1315 PF12019 Type II transport protein GspH ABO_1316 PF02501 Type II secretion system (T2SS), protein I ABO_1316 PF07963 Prokaryotic N-terminal methylation motif ABO_1317 PF07963 Prokaryotic N-terminal methylation motif ABO_1317 PF11612 Type II secretion system (T2SS), protein J ABO_1320 PF04612 Type II secretion system (T2SS), protein M ABO_1324 PF02310 B12 binding domain ABO_1324 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABO_1324 PF00809 Pterin binding enzyme ABO_1324 PF02574 Homocysteine S-methyltransferase ABO_1324 PF02607 B12 binding domain ABO_1325 PF00924 Mechanosensitive ion channel ABO_1325 PF05552 Conserved TM helix ABO_1327 PF02233 NAD(P) transhydrogenase beta subunit ABO_1328 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ABO_1329 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABO_1329 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABO_1330 PF03109 ABC1 family ABO_1332 PF00595 PDZ domain ABO_1332 PF17804 Tail specific protease N-terminal domain ABO_1332 PF11818 C-terminal domain of tail specific protease (DUF3340) ABO_1332 PF03572 Peptidase family S41 ABO_1333 PF07670 Nucleoside recognition ABO_1335 PF01544 CorA-like Mg2+ transporter protein ABO_1338 PF03883 Peroxide stress protein YaaA ABO_1340 PF00582 Universal stress protein family ABO_1341 PF13545 Crp-like helix-turn-helix domain ABO_1341 PF00027 Cyclic nucleotide-binding domain ABO_1342 PF04055 Radical SAM superfamily ABO_1342 PF06969 HemN C-terminal domain ABO_1345 PF00403 Heavy-metal-associated domain ABO_1347 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ABO_1347 PF13746 4Fe-4S dicluster domain ABO_1347 PF12801 4Fe-4S binding domain ABO_1348 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABO_1348 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ABO_1351 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABO_1352 PF00107 Zinc-binding dehydrogenase ABO_1352 PF16197 Ketoacyl-synthetase C-terminal extension ABO_1352 PF02801 Beta-ketoacyl synthase, C-terminal domain ABO_1352 PF08240 Alcohol dehydrogenase GroES-like domain ABO_1352 PF00698 Acyl transferase domain ABO_1352 PF14765 Polyketide synthase dehydratase ABO_1352 PF00550 Phosphopantetheine attachment site ABO_1352 PF08659 KR domain ABO_1352 PF00109 Beta-ketoacyl synthase, N-terminal domain ABO_1353 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_1353 PF03466 LysR substrate binding domain ABO_1354 PF02899 Phage integrase, N-terminal SAM-like domain ABO_1354 PF00589 Phage integrase family ABO_1356 PF00873 AcrB/AcrD/AcrF family ABO_1357 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_1360 PF04945 YHS domain ABO_1363 PF07731 Multicopper oxidase ABO_1363 PF07732 Multicopper oxidase ABO_1363 PF00394 Multicopper oxidase ABO_1365 PF00486 Transcriptional regulatory protein, C terminal ABO_1365 PF00072 Response regulator receiver domain ABO_1366 PF09308 LuxQ, periplasmic ABO_1366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1366 PF00512 His Kinase A (phospho-acceptor) domain ABO_1366 PF00072 Response regulator receiver domain ABO_1367 PF13411 MerR HTH family regulatory protein ABO_1369 PF01252 Signal peptidase (SPase) II ABO_1370 PF01381 Helix-turn-helix ABO_1371 PF02810 SEC-C motif ABO_1371 PF05225 helix-turn-helix, Psq domain ABO_1373 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABO_1374 PF01545 Cation efflux family ABO_1377 PF00873 AcrB/AcrD/AcrF family ABO_1378 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_1378 PF00529 HlyD membrane-fusion protein of T1SS ABO_1380 PF12146 Serine aminopeptidase, S33 ABO_1382 PF00529 HlyD membrane-fusion protein of T1SS ABO_1382 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_1383 PF00873 AcrB/AcrD/AcrF family ABO_1385 PF10431 C-terminal, D2-small domain, of ClpB protein ABO_1385 PF02861 Clp amino terminal domain, pathogenicity island component ABO_1385 PF17871 AAA lid domain ABO_1385 PF00004 ATPase family associated with various cellular activities (AAA) ABO_1385 PF07724 AAA domain (Cdc48 subfamily) ABO_1386 PF04452 RNA methyltransferase ABO_1387 PF00849 RNA pseudouridylate synthase ABO_1387 PF01479 S4 domain ABO_1388 PF04079 Segregation and condensation complex subunit ScpB ABO_1389 PF02616 Segregation and condensation protein ScpA ABO_1390 PF00579 tRNA synthetases class I (W and Y) ABO_1391 PF01300 Telomere recombination ABO_1392 PF02811 PHP domain ABO_1393 PF04279 Intracellular septation protein A ABO_1394 PF03795 YCII-related domain ABO_1397 PF01553 Acyltransferase ABO_1400 PF13472 GDSL-like Lipase/Acylhydrolase family ABO_1401 PF00005 ABC transporter ABO_1403 PF07690 Major Facilitator Superfamily ABO_1405 PF13411 MerR HTH family regulatory protein ABO_1407 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABO_1407 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABO_1408 PF01266 FAD dependent oxidoreductase ABO_1408 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABO_1409 PF02913 FAD linked oxidases, C-terminal domain ABO_1409 PF01565 FAD binding domain ABO_1411 PF00691 OmpA family ABO_1411 PF13488 Glycine zipper ABO_1412 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABO_1412 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABO_1412 PF12833 Helix-turn-helix domain ABO_1412 PF02805 Metal binding domain of Ada ABO_1413 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain ABO_1413 PF00730 HhH-GPD superfamily base excision DNA repair protein ABO_1414 PF07690 Major Facilitator Superfamily ABO_1418 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ABO_1421 PF06803 Protein of unknown function (DUF1232) ABO_1422 PF13614 AAA domain ABO_1423 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABO_1423 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1424 PF01645 Conserved region in glutamate synthase ABO_1425 PF01464 Transglycosylase SLT domain ABO_1425 PF10145 Phage-related minor tail protein ABO_1425 PF01551 Peptidase family M23 ABO_1427 PF00391 PEP-utilising enzyme, mobile domain ABO_1427 PF02896 PEP-utilising enzyme, TIM barrel domain ABO_1427 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABO_1428 PF03618 Kinase/pyrophosphorylase ABO_1429 PF03972 MmgE/PrpD family ABO_1430 PF04303 PrpF protein ABO_1431 PF00694 Aconitase C-terminal domain ABO_1431 PF00330 Aconitase family (aconitate hydratase) ABO_1432 PF00285 Citrate synthase, C-terminal domain ABO_1434 PF00392 Bacterial regulatory proteins, gntR family ABO_1434 PF07729 FCD domain ABO_1435 PF00425 chorismate binding enzyme ABO_1435 PF04715 Anthranilate synthase component I, N terminal region ABO_1437 PF03466 LysR substrate binding domain ABO_1437 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_1444 PF01008 Initiation factor 2 subunit family ABO_1445 PF00596 Class II Aldolase and Adducin N-terminal domain ABO_1446 PF03079 ARD/ARD' family ABO_1448 PF05175 Methyltransferase small domain ABO_1449 PF00270 DEAD/DEAH box helicase ABO_1449 PF04408 Helicase associated domain (HA2) ABO_1449 PF08482 ATP-dependent helicase C-terminal ABO_1449 PF00271 Helicase conserved C-terminal domain ABO_1451 PF11992 Domain of unknown function (DUF3488) ABO_1451 PF13559 Domain of unknown function (DUF4129) ABO_1451 PF01841 Transglutaminase-like superfamily ABO_1453 PF07726 ATPase family associated with various cellular activities (AAA) ABO_1453 PF17863 AAA lid domain ABO_1454 PF01053 Cys/Met metabolism PLP-dependent enzyme ABO_1455 PF00156 Phosphoribosyl transferase domain ABO_1456 PF02674 Colicin V production protein ABO_1458 PF08245 Mur ligase middle domain ABO_1458 PF02875 Mur ligase family, glutamate ligase domain ABO_1459 PF01039 Carboxyl transferase domain ABO_1459 PF17848 Acetyl-coA carboxylase zinc finger domain ABO_1460 PF00290 Tryptophan synthase alpha chain ABO_1461 PF00291 Pyridoxal-phosphate dependent enzyme ABO_1462 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABO_1463 PF01416 tRNA pseudouridine synthase ABO_1465 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABO_1465 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABO_1466 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABO_1466 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABO_1467 PF00180 Isocitrate/isopropylmalate dehydrogenase ABO_1469 PF00694 Aconitase C-terminal domain ABO_1470 PF00330 Aconitase family (aconitate hydratase) ABO_1471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_1472 PF12832 MFS_1 like family ABO_1473 PF01264 Chorismate synthase ABO_1474 PF05175 Methyltransferase small domain ABO_1476 PF00672 HAMP domain ABO_1476 PF00909 Ammonium Transporter Family ABO_1478 PF00375 Sodium:dicarboxylate symporter family ABO_1479 PF00106 short chain dehydrogenase ABO_1481 PF00072 Response regulator receiver domain ABO_1481 PF00486 Transcriptional regulatory protein, C terminal ABO_1483 PF12697 Alpha/beta hydrolase family ABO_1485 PF03372 Endonuclease/Exonuclease/phosphatase family ABO_1487 PF00300 Histidine phosphatase superfamily (branch 1) ABO_1488 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABO_1488 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABO_1489 PF00183 Hsp90 protein ABO_1492 PF02629 CoA binding domain ABO_1492 PF00549 CoA-ligase ABO_1493 PF08442 ATP-grasp domain ABO_1493 PF00549 CoA-ligase ABO_1494 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABO_1494 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1495 PF00364 Biotin-requiring enzyme ABO_1495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABO_1495 PF02817 e3 binding domain ABO_1496 PF16870 2-oxoglutarate dehydrogenase C-terminal ABO_1496 PF16078 2-oxoglutarate dehydrogenase N-terminus ABO_1496 PF00676 Dehydrogenase E1 component ABO_1496 PF02779 Transketolase, pyrimidine binding domain ABO_1497 PF13085 2Fe-2S iron-sulfur cluster binding domain ABO_1498 PF00890 FAD binding domain ABO_1498 PF02910 Fumarate reductase flavoprotein C-term ABO_1499 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABO_1500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABO_1501 PF00285 Citrate synthase, C-terminal domain ABO_1503 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABO_1503 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABO_1507 PF07715 TonB-dependent Receptor Plug Domain ABO_1507 PF00593 TonB dependent receptor ABO_1509 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABO_1511 PF00582 Universal stress protein family ABO_1512 PF01740 STAS domain ABO_1512 PF00916 Sulfate permease family ABO_1513 PF01207 Dihydrouridine synthase (Dus) ABO_1514 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABO_1516 PF04333 MlaA lipoprotein ABO_1518 PF05114 Protein of unknown function (DUF692) ABO_1520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABO_1520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABO_1521 PF04408 Helicase associated domain (HA2) ABO_1521 PF11898 Domain of unknown function (DUF3418) ABO_1521 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABO_1521 PF00271 Helicase conserved C-terminal domain ABO_1521 PF00270 DEAD/DEAH box helicase ABO_1525 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABO_1525 PF01464 Transglycosylase SLT domain ABO_1527 PF05736 OprF membrane domain ABO_1527 PF00691 OmpA family ABO_1529 PF02515 CoA-transferase family III ABO_1530 PF01625 Peptide methionine sulfoxide reductase ABO_1531 PF01641 SelR domain ABO_1533 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_1533 PF12833 Helix-turn-helix domain ABO_1541 PF00561 alpha/beta hydrolase fold ABO_1542 PF00708 Acylphosphatase ABO_1543 PF03631 Virulence factor BrkB ABO_1544 PF03960 ArsC family ABO_1545 PF03358 NADPH-dependent FMN reductase ABO_1551 PF07726 ATPase family associated with various cellular activities (AAA) ABO_1551 PF17863 AAA lid domain ABO_1552 PF01882 Protein of unknown function DUF58 ABO_1553 PF04315 Elongation factor P hydroxylase ABO_1554 PF01554 MatE ABO_1560 PF01206 Sulfurtransferase TusA ABO_1561 PF07690 Major Facilitator Superfamily ABO_1562 PF01728 FtsJ-like methyltransferase ABO_1562 PF18125 RlmM ferredoxin-like domain ABO_1563 PF01842 ACT domain ABO_1563 PF00551 Formyl transferase ABO_1564 PF12833 Helix-turn-helix domain ABO_1564 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_1565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1565 PF00072 Response regulator receiver domain ABO_1566 PF00378 Enoyl-CoA hydratase/isomerase ABO_1566 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABO_1566 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABO_1567 PF00108 Thiolase, N-terminal domain ABO_1567 PF02803 Thiolase, C-terminal domain ABO_1569 PF01713 Smr domain ABO_1570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABO_1571 PF00308 Bacterial dnaA protein ABO_1573 PF00586 AIR synthase related protein, N-terminal domain ABO_1573 PF02769 AIR synthase related protein, C-terminal domain ABO_1574 PF00551 Formyl transferase ABO_1577 PF00692 dUTPase ABO_1578 PF10609 NUBPL iron-transfer P-loop NTPase ABO_1582 PF00817 impB/mucB/samB family ABO_1582 PF13438 Domain of unknown function (DUF4113) ABO_1582 PF11799 impB/mucB/samB family C-terminal domain ABO_1583 PF00717 Peptidase S24-like ABO_1586 PF08468 Methyltransferase small domain N-terminal ABO_1586 PF05175 Methyltransferase small domain ABO_1587 PF14718 Soluble lytic murein transglycosylase L domain ABO_1587 PF01464 Transglycosylase SLT domain ABO_1592 PF00440 Bacterial regulatory proteins, tetR family ABO_1594 PF04055 Radical SAM superfamily ABO_1595 PF05088 Bacterial NAD-glutamate dehydrogenase ABO_1598 PF00672 HAMP domain ABO_1598 PF00512 His Kinase A (phospho-acceptor) domain ABO_1598 PF01627 Hpt domain ABO_1598 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABO_1598 PF00072 Response regulator receiver domain ABO_1598 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1599 PF01588 Putative tRNA binding domain ABO_1599 PF09334 tRNA synthetases class I (M) ABO_1600 PF13545 Crp-like helix-turn-helix domain ABO_1600 PF00027 Cyclic nucleotide-binding domain ABO_1601 PF00596 Class II Aldolase and Adducin N-terminal domain ABO_1609 PF02508 Rnf-Nqr subunit, membrane protein ABO_1610 PF04060 Putative Fe-S cluster ABO_1611 PF12838 4Fe-4S dicluster domain ABO_1611 PF13375 RnfC Barrel sandwich hybrid domain ABO_1611 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABO_1611 PF10531 SLBB domain ABO_1612 PF03116 NQR2, RnfD, RnfE family ABO_1613 PF04205 FMN-binding domain ABO_1614 PF02508 Rnf-Nqr subunit, membrane protein ABO_1616 PF03616 Sodium/glutamate symporter ABO_1617 PF00730 HhH-GPD superfamily base excision DNA repair protein ABO_1617 PF10576 Iron-sulfur binding domain of endonuclease III ABO_1617 PF00633 Helix-hairpin-helix motif ABO_1618 PF01738 Dienelactone hydrolase family ABO_1619 PF01205 Uncharacterized protein family UPF0029 ABO_1619 PF09186 Domain of unknown function (DUF1949) ABO_1621 PF00267 Gram-negative porin ABO_1622 PF03819 MazG nucleotide pyrophosphohydrolase domain ABO_1623 PF13291 ACT domain ABO_1623 PF04607 Region found in RelA / SpoT proteins ABO_1623 PF02824 TGS domain ABO_1624 PF05958 tRNA (Uracil-5-)-methyltransferase ABO_1626 PF00291 Pyridoxal-phosphate dependent enzyme ABO_1627 PF00672 HAMP domain ABO_1627 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1627 PF00072 Response regulator receiver domain ABO_1627 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABO_1627 PF00512 His Kinase A (phospho-acceptor) domain ABO_1627 PF01627 Hpt domain ABO_1628 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABO_1629 PF02565 Recombination protein O C terminal ABO_1629 PF11967 Recombination protein O N terminal ABO_1630 PF01926 50S ribosome-binding GTPase ABO_1630 PF07650 KH domain ABO_1631 PF00035 Double-stranded RNA binding motif ABO_1631 PF14622 Ribonuclease-III-like ABO_1633 PF10502 Signal peptidase, peptidase S26 ABO_1634 PF00679 Elongation factor G C-terminus ABO_1634 PF03144 Elongation factor Tu domain 2 ABO_1634 PF06421 GTP-binding protein LepA C-terminus ABO_1634 PF00009 Elongation factor Tu GTP binding domain ABO_1635 PF17820 PDZ domain ABO_1635 PF13180 PDZ domain ABO_1637 PF03888 MucB/RseB N-terminal domain ABO_1637 PF17188 MucB/RseB C-terminal domain ABO_1638 PF03873 Anti sigma-E protein RseA, C-terminal domain ABO_1638 PF03872 Anti sigma-E protein RseA, N-terminal domain ABO_1639 PF08281 Sigma-70, region 4 ABO_1639 PF04542 Sigma-70 region 2 ABO_1641 PF00890 FAD binding domain ABO_1641 PF02910 Fumarate reductase flavoprotein C-term ABO_1644 PF01571 Aminomethyltransferase folate-binding domain ABO_1645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABO_1645 PF00378 Enoyl-CoA hydratase/isomerase ABO_1645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABO_1646 PF03167 Uracil DNA glycosylase superfamily ABO_1647 PF00440 Bacterial regulatory proteins, tetR family ABO_1648 PF00152 tRNA synthetases class II (D, K and N) ABO_1648 PF01336 OB-fold nucleic acid binding domain ABO_1649 PF03462 PCRF domain ABO_1649 PF00472 RF-1 domain ABO_1651 PF17768 RecJ OB domain ABO_1651 PF02272 DHHA1 domain ABO_1651 PF01368 DHH family ABO_1652 PF00378 Enoyl-CoA hydratase/isomerase ABO_1652 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABO_1652 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABO_1653 PF00108 Thiolase, N-terminal domain ABO_1653 PF02803 Thiolase, C-terminal domain ABO_1659 PF00145 C-5 cytosine-specific DNA methylase ABO_1662 PF00226 DnaJ domain ABO_1662 PF01556 DnaJ C terminal domain ABO_1663 PF13193 AMP-binding enzyme C-terminal domain ABO_1663 PF00501 AMP-binding enzyme ABO_1665 PF00580 UvrD/REP helicase N-terminal domain ABO_1665 PF13361 UvrD-like helicase C-terminal domain ABO_1667 PF08241 Methyltransferase domain ABO_1671 PF00583 Acetyltransferase (GNAT) family ABO_1674 PF12704 MacB-like periplasmic core domain ABO_1674 PF02687 FtsX-like permease family ABO_1674 PF00005 ABC transporter ABO_1677 PF01475 Ferric uptake regulator family ABO_1679 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABO_1679 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABO_1680 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABO_1682 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_1683 PF01979 Amidohydrolase family ABO_1684 PF13419 Haloacid dehalogenase-like hydrolase ABO_1686 PF01507 Phosphoadenosine phosphosulfate reductase family ABO_1688 PF07715 TonB-dependent Receptor Plug Domain ABO_1688 PF00593 TonB dependent receptor ABO_1690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1690 PF00512 His Kinase A (phospho-acceptor) domain ABO_1690 PF16750 Sensor domain of 2-component histidine kinase ABO_1690 PF00672 HAMP domain ABO_1691 PF00072 Response regulator receiver domain ABO_1691 PF00486 Transcriptional regulatory protein, C terminal ABO_1695 PF03880 DbpA RNA binding domain ABO_1695 PF00271 Helicase conserved C-terminal domain ABO_1695 PF00270 DEAD/DEAH box helicase ABO_1696 PF07311 Dodecin ABO_1697 PF00881 Nitroreductase family ABO_1701 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_1701 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_1701 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_1702 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_1702 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_1702 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_1704 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1704 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABO_1705 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_1705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABO_1706 PF02909 Tetracyclin repressor-like, C-terminal domain ABO_1706 PF00440 Bacterial regulatory proteins, tetR family ABO_1707 PF12697 Alpha/beta hydrolase family ABO_1709 PF00486 Transcriptional regulatory protein, C terminal ABO_1709 PF00072 Response regulator receiver domain ABO_1712 PF02803 Thiolase, C-terminal domain ABO_1712 PF00108 Thiolase, N-terminal domain ABO_1715 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_1715 PF12833 Helix-turn-helix domain ABO_1716 PF00487 Fatty acid desaturase ABO_1717 PF00175 Oxidoreductase NAD-binding domain ABO_1717 PF00111 2Fe-2S iron-sulfur cluster binding domain ABO_1717 PF00970 Oxidoreductase FAD-binding domain ABO_1718 PF00440 Bacterial regulatory proteins, tetR family ABO_1722 PF00005 ABC transporter ABO_1722 PF03466 LysR substrate binding domain ABO_1723 PF00528 Binding-protein-dependent transport system inner membrane component ABO_1724 PF02567 Phenazine biosynthesis-like protein ABO_1725 PF00586 AIR synthase related protein, N-terminal domain ABO_1725 PF02769 AIR synthase related protein, C-terminal domain ABO_1728 PF00588 SpoU rRNA Methylase family ABO_1729 PF00924 Mechanosensitive ion channel ABO_1729 PF12794 Mechanosensitive ion channel inner membrane domain 1 ABO_1729 PF12795 Mechanosensitive ion channel porin domain ABO_1731 PF13193 AMP-binding enzyme C-terminal domain ABO_1731 PF00501 AMP-binding enzyme ABO_1731 PF16177 Acetyl-coenzyme A synthetase N-terminus ABO_1734 PF04013 Putative SAM-dependent RNA methyltransferase ABO_1741 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABO_1744 PF00216 Bacterial DNA-binding protein ABO_1745 PF00575 S1 RNA binding domain ABO_1746 PF02224 Cytidylate kinase ABO_1747 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABO_1748 PF00155 Aminotransferase class I and II ABO_1749 PF01817 Chorismate mutase type II ABO_1749 PF00800 Prephenate dehydratase ABO_1749 PF01842 ACT domain ABO_1750 PF00266 Aminotransferase class-V ABO_1751 PF03989 DNA gyrase C-terminal domain, beta-propeller ABO_1751 PF00521 DNA gyrase/topoisomerase IV, subunit A ABO_1752 PF01979 Amidohydrolase family ABO_1754 PF13419 Haloacid dehalogenase-like hydrolase ABO_1755 PF00106 short chain dehydrogenase ABO_1759 PF03109 ABC1 family ABO_1764 PF01230 HIT domain ABO_1766 PF03692 Putative zinc- or iron-chelating domain ABO_1767 PF05166 YcgL domain ABO_1768 PF01612 3'-5' exonuclease ABO_1768 PF00570 HRDC domain ABO_1769 PF00300 Histidine phosphatase superfamily (branch 1) ABO_1772 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_1772 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_1772 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_1773 PF13662 Toprim domain ABO_1773 PF02132 RecR protein ABO_1774 PF02575 YbaB/EbfC DNA-binding family ABO_1775 PF12169 DNA polymerase III subunits gamma and tau domain III ABO_1775 PF12170 DNA polymerase III tau subunit V interacting with alpha ABO_1775 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABO_1776 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABO_1776 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABO_1777 PF00011 Hsp20/alpha crystallin family ABO_1779 PF10722 Putative bacterial sensory transduction regulator ABO_1780 PF03551 Transcriptional regulator PadR-like family ABO_1780 PF10400 Virulence activator alpha C-term ABO_1782 PF01648 4'-phosphopantetheinyl transferase superfamily ABO_1782 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ABO_1783 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ABO_1783 PF03033 Glycosyltransferase family 28 N-terminal domain ABO_1784 PF13193 AMP-binding enzyme C-terminal domain ABO_1784 PF00501 AMP-binding enzyme ABO_1784 PF00668 Condensation domain ABO_1784 PF00550 Phosphopantetheine attachment site ABO_1784 PF00975 Thioesterase domain ABO_1786 PF13333 Integrase core domain ABO_1786 PF13276 HTH-like domain ABO_1786 PF00665 Integrase core domain ABO_1791 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABO_1791 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABO_1792 PF00893 Small Multidrug Resistance protein ABO_1793 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABO_1793 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABO_1794 PF01979 Amidohydrolase family ABO_1796 PF02599 Global regulator protein family ABO_1797 PF13840 ACT domain ABO_1797 PF01842 ACT domain ABO_1797 PF00696 Amino acid kinase family ABO_1798 PF01411 tRNA synthetases class II (A) ABO_1798 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABO_1798 PF02272 DHHA1 domain ABO_1799 PF01925 Sulfite exporter TauE/SafE ABO_1800 PF02631 RecX family ABO_1801 PF00154 recA bacterial DNA recombination protein ABO_1802 PF02464 Competence-damaged protein ABO_1803 PF01709 Transcriptional regulator ABO_1804 PF06974 Protein of unknown function (DUF1298) ABO_1804 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABO_1806 PF00501 AMP-binding enzyme ABO_1806 PF13193 AMP-binding enzyme C-terminal domain ABO_1808 PF01527 Transposase ABO_1809 PF05190 MutS family domain IV ABO_1809 PF05188 MutS domain II ABO_1809 PF05192 MutS domain III ABO_1809 PF00488 MutS domain V ABO_1809 PF01624 MutS domain I ABO_1810 PF11953 Domain of unknown function (DUF3470) ABO_1810 PF00037 4Fe-4S binding domain ABO_1813 PF00535 Glycosyl transferase family 2 ABO_1816 PF13396 Phospholipase_D-nuclease N-terminal ABO_1816 PF13091 PLD-like domain ABO_1818 PF17946 RecC C-terminal domain ABO_1819 PF00580 UvrD/REP helicase N-terminal domain ABO_1819 PF13361 UvrD-like helicase C-terminal domain ABO_1819 PF12705 PD-(D/E)XK nuclease superfamily ABO_1820 PF13538 UvrD-like helicase C-terminal domain ABO_1821 PF07027 Protein of unknown function (DUF1318) ABO_1822 PF13617 YnbE-like lipoprotein ABO_1824 PF01926 50S ribosome-binding GTPase ABO_1825 PF13195 Protein of unknown function (DUF4011) ABO_1825 PF13087 AAA domain ABO_1825 PF13086 AAA domain ABO_1825 PF13195 Protein of unknown function (DUF4011) ABO_1825 PF13087 AAA domain ABO_1825 PF13086 AAA domain ABO_1828 PF01119 DNA mismatch repair protein, C-terminal domain ABO_1828 PF08676 MutL C terminal dimerisation domain ABO_1829 PF01420 Type I restriction modification DNA specificity domain ABO_1830 PF12161 HsdM N-terminal domain ABO_1830 PF02384 N-6 DNA Methylase ABO_1831 PF02646 RmuC family ABO_1832 PF04851 Type III restriction enzyme, res subunit ABO_1832 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ABO_1832 PF00271 Helicase conserved C-terminal domain ABO_1832 PF08463 EcoEI R protein C-terminal ABO_1836 PF00216 Bacterial DNA-binding protein ABO_1837 PF03147 Ferredoxin-fold anticodon binding domain ABO_1837 PF03483 B3/4 domain ABO_1837 PF01588 Putative tRNA binding domain ABO_1837 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABO_1837 PF03484 tRNA synthetase B5 domain ABO_1838 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABO_1838 PF01409 tRNA synthetases class II core domain (F) ABO_1839 PF00453 Ribosomal protein L20 ABO_1840 PF01632 Ribosomal protein L35 ABO_1841 PF00707 Translation initiation factor IF-3, C-terminal domain ABO_1841 PF05198 Translation initiation factor IF-3, N-terminal domain ABO_1845 PF00199 Catalase ABO_1845 PF06628 Catalase-related immune-responsive ABO_1848 PF00005 ABC transporter ABO_1849 PF13533 Biotin-lipoyl like ABO_1850 PF02540 NAD synthase ABO_1850 PF00958 GMP synthase C terminal domain ABO_1850 PF00117 Glutamine amidotransferase class-I ABO_1851 PF00478 IMP dehydrogenase / GMP reductase domain ABO_1851 PF00571 CBS domain ABO_1852 PF02601 Exonuclease VII, large subunit ABO_1852 PF13742 OB-fold nucleic acid binding domain ABO_1853 PF00672 HAMP domain ABO_1853 PF00512 His Kinase A (phospho-acceptor) domain ABO_1853 PF00072 Response regulator receiver domain ABO_1853 PF01627 Hpt domain ABO_1853 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABO_1853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1856 PF01926 50S ribosome-binding GTPase ABO_1856 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABO_1857 PF01011 PQQ enzyme repeat ABO_1857 PF13360 PQQ-like domain ABO_1859 PF03129 Anticodon binding domain ABO_1859 PF13393 Histidyl-tRNA synthetase ABO_1860 PF04551 GcpE protein ABO_1861 PF13464 Domain of unknown function (DUF4115) ABO_1863 PF04055 Radical SAM superfamily ABO_1864 PF00334 Nucleoside diphosphate kinase ABO_1865 PF01458 Uncharacterized protein family (UPF0051) ABO_1866 PF00005 ABC transporter ABO_1867 PF01458 Uncharacterized protein family (UPF0051) ABO_1868 PF00266 Aminotransferase class-V ABO_1869 PF01521 Iron-sulphur cluster biosynthesis ABO_1871 PF02657 Fe-S metabolism associated domain ABO_1872 PF00266 Aminotransferase class-V ABO_1873 PF02082 Transcriptional regulator ABO_1877 PF01725 Ham1 family ABO_1881 PF04536 TPM domain ABO_1882 PF04011 LemA family ABO_1883 PF01541 GIY-YIG catalytic domain ABO_1886 PF01738 Dienelactone hydrolase family ABO_1889 PF00005 ABC transporter ABO_1889 PF08402 TOBE domain ABO_1891 PF09347 Domain of unknown function (DUF1989) ABO_1892 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABO_1892 PF00289 Biotin carboxylase, N-terminal domain ABO_1892 PF02785 Biotin carboxylase C-terminal domain ABO_1894 PF00271 Helicase conserved C-terminal domain ABO_1894 PF18337 RapA N-terminal Tudor like domain ABO_1894 PF12137 RNA polymerase recycling family C-terminal ABO_1894 PF00176 SNF2 family N-terminal domain ABO_1894 PF18339 RapA N-terminal Tudor like domain 1 ABO_1895 PF00561 alpha/beta hydrolase fold ABO_1897 PF00510 Cytochrome c oxidase subunit III ABO_1898 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ABO_1899 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABO_1900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABO_1900 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABO_1905 PF02628 Cytochrome oxidase assembly protein ABO_1906 PF01040 UbiA prenyltransferase family ABO_1908 PF04011 LemA family ABO_1909 PF01435 Peptidase family M48 ABO_1912 PF00313 'Cold-shock' DNA-binding domain ABO_1913 PF00474 Sodium:solute symporter family ABO_1918 PF00106 short chain dehydrogenase ABO_1920 PF00271 Helicase conserved C-terminal domain ABO_1920 PF00270 DEAD/DEAH box helicase ABO_1921 PF00581 Rhodanese-like domain ABO_1922 PF03922 OmpW family ABO_1924 PF13638 PIN domain ABO_1924 PF02562 PhoH-like protein ABO_1926 PF04191 Phospholipid methyltransferase ABO_1933 PF02630 SCO1/SenC ABO_1934 PF00919 Uncharacterized protein family UPF0004 ABO_1934 PF01938 TRAM domain ABO_1934 PF04055 Radical SAM superfamily ABO_1935 PF02562 PhoH-like protein ABO_1936 PF02130 Uncharacterized protein family UPF0054 ABO_1937 PF00571 CBS domain ABO_1937 PF03471 Transporter associated domain ABO_1940 PF00795 Carbon-nitrogen hydrolase ABO_1941 PF00753 Metallo-beta-lactamase superfamily ABO_1943 PF00916 Sulfate permease family ABO_1943 PF01740 STAS domain ABO_1944 PF00753 Metallo-beta-lactamase superfamily ABO_1944 PF04273 Putative phosphatase (DUF442) ABO_1945 PF01740 STAS domain ABO_1945 PF00916 Sulfate permease family ABO_1946 PF02698 DUF218 domain ABO_1947 PF13603 Leucyl-tRNA synthetase, Domain 2 ABO_1947 PF08264 Anticodon-binding domain of tRNA ABO_1947 PF00133 tRNA synthetases class I (I, L, M and V) ABO_1951 PF00171 Aldehyde dehydrogenase family ABO_1952 PF01467 Cytidylyltransferase-like ABO_1954 PF02590 Predicted SPOUT methyltransferase ABO_1955 PF00905 Penicillin binding protein transpeptidase domain ABO_1955 PF03717 Penicillin-binding Protein dimerisation domain ABO_1956 PF01098 Cell cycle protein ABO_1957 PF13406 Transglycosylase SLT domain ABO_1958 PF03330 Lytic transglycolase ABO_1958 PF05036 Sporulation related domain ABO_1959 PF00768 D-alanyl-D-alanine carboxypeptidase ABO_1959 PF07943 Penicillin-binding protein 5, C-terminal domain ABO_1960 PF01063 Amino-transferase class IV ABO_1961 PF04359 Protein of unknown function (DUF493) ABO_1963 PF03099 Biotin/lipoate A/B protein ligase family ABO_1964 PF04055 Radical SAM superfamily ABO_1964 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ABO_1966 PF04170 NlpE N-terminal domain ABO_1966 PF17185 NlpE C-terminal OB domain ABO_1967 PF01618 MotA/TolQ/ExbB proton channel family ABO_1972 PF02441 Flavoprotein ABO_1974 PF02875 Mur ligase family, glutamate ligase domain ABO_1974 PF08245 Mur ligase middle domain ABO_1974 PF01225 Mur ligase family, catalytic domain ABO_1975 PF00561 alpha/beta hydrolase fold ABO_1976 PF03280 Proteobacterial lipase chaperone protein ABO_1978 PF03069 Acetamidase/Formamidase family ABO_1979 PF10431 C-terminal, D2-small domain, of ClpB protein ABO_1979 PF07724 AAA domain (Cdc48 subfamily) ABO_1980 PF00795 Carbon-nitrogen hydrolase ABO_1981 PF00005 ABC transporter ABO_1982 PF00005 ABC transporter ABO_1983 PF02653 Branched-chain amino acid transport system / permease component ABO_1984 PF11862 Domain of unknown function (DUF3382) ABO_1984 PF02653 Branched-chain amino acid transport system / permease component ABO_1985 PF13458 Periplasmic binding protein ABO_1986 PF00512 His Kinase A (phospho-acceptor) domain ABO_1986 PF01627 Hpt domain ABO_1986 PF00072 Response regulator receiver domain ABO_1986 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABO_1986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_1987 PF00072 Response regulator receiver domain ABO_1987 PF00486 Transcriptional regulatory protein, C terminal ABO_1989 PF00365 Phosphofructokinase ABO_1990 PF00860 Permease family ABO_1994 PF00719 Inorganic pyrophosphatase ABO_1995 PF12833 Helix-turn-helix domain ABO_1995 PF02311 AraC-like ligand binding domain ABO_2000 PF08521 Two-component sensor kinase N-terminal ABO_2000 PF00512 His Kinase A (phospho-acceptor) domain ABO_2000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2001 PF00072 Response regulator receiver domain ABO_2001 PF00486 Transcriptional regulatory protein, C terminal ABO_2002 PF02424 ApbE family ABO_2006 PF00578 AhpC/TSA family ABO_2007 PF02683 Cytochrome C biogenesis protein transmembrane region ABO_2007 PF11412 Disulphide bond corrector protein DsbC ABO_2008 PF01220 Dehydroquinase class II ABO_2009 PF00364 Biotin-requiring enzyme ABO_2010 PF00289 Biotin carboxylase, N-terminal domain ABO_2010 PF02785 Biotin carboxylase C-terminal domain ABO_2010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABO_2013 PF01207 Dihydrouridine synthase (Dus) ABO_2014 PF02954 Bacterial regulatory protein, Fis family ABO_2015 PF01808 AICARFT/IMPCHase bienzyme ABO_2015 PF02142 MGS-like domain ABO_2016 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABO_2016 PF02844 Phosphoribosylglycinamide synthetase, N domain ABO_2016 PF02843 Phosphoribosylglycinamide synthetase, C domain ABO_2018 PF00672 HAMP domain ABO_2018 PF01627 Hpt domain ABO_2018 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABO_2018 PF00512 His Kinase A (phospho-acceptor) domain ABO_2018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2018 PF00072 Response regulator receiver domain ABO_2019 PF01434 Peptidase family M41 ABO_2019 PF17862 AAA+ lid domain ABO_2019 PF00004 ATPase family associated with various cellular activities (AAA) ABO_2020 PF03232 Ubiquinone biosynthesis protein COQ7 ABO_2021 PF02675 S-adenosylmethionine decarboxylase ABO_2022 PF02566 OsmC-like protein ABO_2023 PF00027 Cyclic nucleotide-binding domain ABO_2023 PF13545 Crp-like helix-turn-helix domain ABO_2024 PF00218 Indole-3-glycerol phosphate synthase ABO_2025 PF02885 Glycosyl transferase family, helical bundle domain ABO_2025 PF00591 Glycosyl transferase family, a/b domain ABO_2026 PF00117 Glutamine amidotransferase class-I ABO_2027 PF04715 Anthranilate synthase component I, N terminal region ABO_2027 PF00425 chorismate binding enzyme ABO_2031 PF00072 Response regulator receiver domain ABO_2032 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2032 PF00512 His Kinase A (phospho-acceptor) domain ABO_2034 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABO_2035 PF00510 Cytochrome c oxidase subunit III ABO_2036 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABO_2037 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABO_2037 PF06481 COX Aromatic Rich Motif ABO_2038 PF00083 Sugar (and other) transporter ABO_2038 PF07690 Major Facilitator Superfamily ABO_2039 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_2039 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABO_2040 PF01638 HxlR-like helix-turn-helix ABO_2041 PF00877 NlpC/P60 family ABO_2042 PF00834 Ribulose-phosphate 3 epimerase family ABO_2043 PF00483 Nucleotidyl transferase ABO_2044 PF01636 Phosphotransferase enzyme family ABO_2045 PF04453 LPS transport system D ABO_2045 PF03968 OstA-like protein ABO_2046 PF00639 PPIC-type PPIASE domain ABO_2046 PF09312 SurA N-terminal domain ABO_2047 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABO_2048 PF00398 Ribosomal RNA adenine dimethylase ABO_2049 PF04379 ApaG domain ABO_2050 PF00149 Calcineurin-like phosphoesterase ABO_2052 PF01966 HD domain ABO_2052 PF01743 Poly A polymerase head domain ABO_2052 PF12627 Probable RNA and SrmB- binding site of polymerase A ABO_2056 PF01227 GTP cyclohydrolase I ABO_2056 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABO_2057 PF02152 Dihydroneopterin aldolase ABO_2058 PF02660 Glycerol-3-phosphate acyltransferase ABO_2059 PF00814 Glycoprotease family ABO_2060 PF01165 Ribosomal protein S21 ABO_2061 PF09424 Yqey-like protein ABO_2062 PF01807 CHC2 zinc finger ABO_2062 PF08275 DNA primase catalytic core, N-terminal domain ABO_2062 PF13662 Toprim domain ABO_2062 PF08278 DNA primase DnaG DnaB-binding ABO_2062 PF10410 DnaB-helicase binding domain of primase ABO_2063 PF03979 Sigma-70 factor, region 1.1 ABO_2063 PF00140 Sigma-70 factor, region 1.2 ABO_2063 PF04542 Sigma-70 region 2 ABO_2063 PF04545 Sigma-70, region 4 ABO_2063 PF04546 Sigma-70, non-essential region ABO_2063 PF04539 Sigma-70 region 3 ABO_2064 PF00589 Phage integrase family ABO_2072 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ABO_2074 PF13614 AAA domain ABO_2075 PF08535 KorB domain ABO_2075 PF02195 ParB-like nuclease domain ABO_2075 PF06613 KorB C-terminal beta-barrel domain ABO_2076 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABO_2078 PF00912 Transglycosylase ABO_2078 PF00905 Penicillin binding protein transpeptidase domain ABO_2078 PF17092 Penicillin-binding protein OB-like domain ABO_2079 PF01555 DNA methylase ABO_2081 PF13333 Integrase core domain ABO_2081 PF13276 HTH-like domain ABO_2081 PF00665 Integrase core domain ABO_2082 PF01527 Transposase ABO_2084 PF00012 Hsp70 protein ABO_2086 PF00270 DEAD/DEAH box helicase ABO_2086 PF03880 DbpA RNA binding domain ABO_2086 PF00271 Helicase conserved C-terminal domain ABO_2087 PF01648 4'-phosphopantetheinyl transferase superfamily ABO_2087 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ABO_2089 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABO_2091 PF07715 TonB-dependent Receptor Plug Domain ABO_2091 PF00593 TonB dependent receptor ABO_2092 PF00550 Phosphopantetheine attachment site ABO_2092 PF00668 Condensation domain ABO_2092 PF13193 AMP-binding enzyme C-terminal domain ABO_2092 PF00501 AMP-binding enzyme ABO_2093 PF00501 AMP-binding enzyme ABO_2093 PF13193 AMP-binding enzyme C-terminal domain ABO_2093 PF00550 Phosphopantetheine attachment site ABO_2093 PF07993 Male sterility protein ABO_2093 PF00668 Condensation domain ABO_2094 PF03621 MbtH-like protein ABO_2095 PF00005 ABC transporter ABO_2098 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_2098 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_2098 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABO_2098 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_2099 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABO_2099 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABO_2100 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABO_2100 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABO_2101 PF04304 Protein of unknown function (DUF454) ABO_2102 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_2102 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_2102 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_2102 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABO_2103 PF03966 Trm112p-like protein ABO_2104 PF02253 Phospholipase A1 ABO_2107 PF00743 Flavin-binding monooxygenase-like ABO_2108 PF07859 alpha/beta hydrolase fold ABO_2109 PF00106 short chain dehydrogenase ABO_2112 PF00106 short chain dehydrogenase ABO_2113 PF04336 Acyl carrier protein phosphodiesterase ABO_2114 PF01230 HIT domain ABO_2116 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_2116 PF03466 LysR substrate binding domain ABO_2118 PF00360 Phytochrome region ABO_2118 PF00990 Diguanylate cyclase, GGDEF domain ABO_2118 PF00563 EAL domain ABO_2118 PF01590 GAF domain ABO_2119 PF00175 Oxidoreductase NAD-binding domain ABO_2119 PF00042 Globin ABO_2119 PF00970 Oxidoreductase FAD-binding domain ABO_2120 PF02082 Transcriptional regulator ABO_2123 PF03466 LysR substrate binding domain ABO_2123 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_2124 PF00667 FAD binding domain ABO_2124 PF00175 Oxidoreductase NAD-binding domain ABO_2124 PF00258 Flavodoxin ABO_2125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABO_2125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABO_2126 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABO_2126 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABO_2130 PF03060 Nitronate monooxygenase ABO_2132 PF00072 Response regulator receiver domain ABO_2133 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABO_2133 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABO_2133 PF02824 TGS domain ABO_2133 PF03129 Anticodon binding domain ABO_2134 PF01502 Phosphoribosyl-AMP cyclohydrolase ABO_2135 PF09190 DALR domain ABO_2135 PF01406 tRNA synthetases class I (C) catalytic domain ABO_2137 PF01809 Putative membrane protein insertion efficiency factor ABO_2138 PF00593 TonB dependent receptor ABO_2138 PF07715 TonB-dependent Receptor Plug Domain ABO_2142 PF00474 Sodium:solute symporter family ABO_2144 PF02649 Type I GTP cyclohydrolase folE2 ABO_2146 PF03480 Bacterial extracellular solute-binding protein, family 7 ABO_2147 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABO_2148 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABO_2150 PF00583 Acetyltransferase (GNAT) family ABO_2151 PF00202 Aminotransferase class-III ABO_2152 PF06339 Ectoine synthase ABO_2154 PF00196 Bacterial regulatory proteins, luxR family ABO_2154 PF00072 Response regulator receiver domain ABO_2155 PF00072 Response regulator receiver domain ABO_2155 PF09456 RcsC Alpha-Beta-Loop (ABL) ABO_2155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2155 PF00512 His Kinase A (phospho-acceptor) domain ABO_2156 PF14579 Helix-hairpin-helix motif ABO_2156 PF14480 DNA polymerase III polC-type N-terminus I ABO_2156 PF02811 PHP domain ABO_2156 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABO_2156 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABO_2156 PF00929 Exonuclease ABO_2156 PF01336 OB-fold nucleic acid binding domain ABO_2156 PF11490 DNA polymerase III polC-type N-terminus II ABO_2158 PF00474 Sodium:solute symporter family ABO_2162 PF01207 Dihydrouridine synthase (Dus) ABO_2164 PF02609 Exonuclease VII small subunit ABO_2165 PF00348 Polyprenyl synthetase ABO_2166 PF02779 Transketolase, pyrimidine binding domain ABO_2166 PF02780 Transketolase, C-terminal domain ABO_2166 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABO_2167 PF01590 GAF domain ABO_2167 PF00990 Diguanylate cyclase, GGDEF domain ABO_2167 PF00563 EAL domain ABO_2167 PF00360 Phytochrome region ABO_2168 PF04608 Phosphatidylglycerophosphatase A ABO_2169 PF00586 AIR synthase related protein, N-terminal domain ABO_2169 PF02769 AIR synthase related protein, C-terminal domain ABO_2170 PF01029 NusB family ABO_2171 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABO_2172 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABO_2172 PF00925 GTP cyclohydrolase II ABO_2173 PF00677 Lumazine binding domain ABO_2174 PF01872 RibD C-terminal domain ABO_2174 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABO_2175 PF03477 ATP cone domain ABO_2176 PF00464 Serine hydroxymethyltransferase ABO_2177 PF12848 ABC transporter ABO_2177 PF00005 ABC transporter ABO_2179 PF08281 Sigma-70, region 4 ABO_2179 PF04542 Sigma-70 region 2 ABO_2182 PF13847 Methyltransferase domain ABO_2183 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABO_2183 PF00403 Heavy-metal-associated domain ABO_2183 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_2185 PF18073 Rubredoxin metal binding domain ABO_2186 PF01168 Alanine racemase, N-terminal domain ABO_2186 PF00842 Alanine racemase, C-terminal domain ABO_2187 PF00772 DnaB-like helicase N terminal domain ABO_2187 PF03796 DnaB-like helicase C terminal domain ABO_2188 PF03948 Ribosomal protein L9, C-terminal domain ABO_2188 PF01281 Ribosomal protein L9, N-terminal domain ABO_2189 PF01084 Ribosomal protein S18 ABO_2191 PF01250 Ribosomal protein S6 ABO_2192 PF00588 SpoU rRNA Methylase family ABO_2192 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABO_2193 PF08206 Ribonuclease B OB domain ABO_2193 PF00773 RNB domain ABO_2193 PF00575 S1 RNA binding domain ABO_2193 PF17876 Cold shock domain ABO_2193 PF08461 Ribonuclease R winged-helix domain ABO_2197 PF00709 Adenylosuccinate synthetase ABO_2198 PF13393 Histidyl-tRNA synthetase ABO_2200 PF01145 SPFH domain / Band 7 family ABO_2201 PF01145 SPFH domain / Band 7 family ABO_2201 PF12221 Bacterial membrane protein N terminal ABO_2202 PF01926 50S ribosome-binding GTPase ABO_2202 PF13167 GTP-binding GTPase N-terminal ABO_2202 PF16360 GTP-binding GTPase Middle Region ABO_2203 PF17209 Hfq protein ABO_2205 PF01119 DNA mismatch repair protein, C-terminal domain ABO_2205 PF08676 MutL C terminal dimerisation domain ABO_2206 PF11741 AMIN domain ABO_2206 PF01520 N-acetylmuramoyl-L-alanine amidase ABO_2207 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABO_2208 PF03853 YjeF-related protein N-terminus ABO_2208 PF01256 Carbohydrate kinase ABO_2209 PF08331 Domain of unknown function (DUF1730) ABO_2210 PF00929 Exonuclease ABO_2211 PF03193 RsgA GTPase ABO_2212 PF00581 Rhodanese-like domain ABO_2213 PF02666 Phosphatidylserine decarboxylase ABO_2217 PF08241 Methyltransferase domain ABO_2218 PF00561 alpha/beta hydrolase fold ABO_2219 PF00155 Aminotransferase class I and II ABO_2220 PF06968 Biotin and Thiamin Synthesis associated domain ABO_2220 PF04055 Radical SAM superfamily ABO_2221 PF00156 Phosphoribosyl transferase domain ABO_2222 PF04029 2-phosphosulpholactate phosphatase ABO_2223 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_2223 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_2223 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_2225 PF01329 Pterin 4 alpha carbinolamine dehydratase ABO_2227 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABO_2228 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_2228 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABO_2229 PF01493 GXGXG motif ABO_2229 PF00310 Glutamine amidotransferases class-II ABO_2229 PF04898 Glutamate synthase central domain ABO_2229 PF01645 Conserved region in glutamate synthase ABO_2231 PF01761 3-dehydroquinate synthase ABO_2232 PF01202 Shikimate kinase ABO_2233 PF07660 Secretin and TonB N terminus short domain ABO_2233 PF11741 AMIN domain ABO_2233 PF03958 Bacterial type II/III secretion system short domain ABO_2233 PF00263 Bacterial type II and III secretion system protein ABO_2238 PF17092 Penicillin-binding protein OB-like domain ABO_2238 PF00905 Penicillin binding protein transpeptidase domain ABO_2238 PF00912 Transglycosylase ABO_2239 PF00390 Malic enzyme, N-terminal domain ABO_2239 PF03949 Malic enzyme, NAD binding domain ABO_2240 PF01197 Ribosomal protein L31 ABO_2241 PF00271 Helicase conserved C-terminal domain ABO_2241 PF17764 3′ DNA-binding domain (3′BD) ABO_2241 PF18074 Primosomal protein N C-terminal domain ABO_2241 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABO_2241 PF00270 DEAD/DEAH box helicase ABO_2242 PF05746 DALR anticodon binding domain ABO_2242 PF00750 tRNA synthetases class I (R) ABO_2242 PF03485 Arginyl tRNA synthetase N terminal domain ABO_2244 PF00227 Proteasome subunit ABO_2245 PF10431 C-terminal, D2-small domain, of ClpB protein ABO_2245 PF00004 ATPase family associated with various cellular activities (AAA) ABO_2245 PF07724 AAA domain (Cdc48 subfamily) ABO_2246 PF01209 ubiE/COQ5 methyltransferase family ABO_2248 PF03109 ABC1 family ABO_2249 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABO_2250 PF02416 mttA/Hcf106 family ABO_2251 PF02416 mttA/Hcf106 family ABO_2252 PF00902 Sec-independent protein translocase protein (TatC) ABO_2256 PF02580 D-Tyr-tRNA(Tyr) deacylase ABO_2257 PF00561 alpha/beta hydrolase fold ABO_2259 PF02954 Bacterial regulatory protein, Fis family ABO_2259 PF00072 Response regulator receiver domain ABO_2259 PF00158 Sigma-54 interaction domain ABO_2260 PF00512 His Kinase A (phospho-acceptor) domain ABO_2260 PF00989 PAS fold ABO_2260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2262 PF03951 Glutamine synthetase, beta-Grasp domain ABO_2262 PF00120 Glutamine synthetase, catalytic domain ABO_2265 PF00884 Sulfatase ABO_2265 PF11893 Domain of unknown function (DUF3413) ABO_2271 PF00588 SpoU rRNA Methylase family ABO_2272 PF02556 Preprotein translocase subunit SecB ABO_2273 PF00462 Glutaredoxin ABO_2274 PF00581 Rhodanese-like domain ABO_2275 PF01551 Peptidase family M23 ABO_2276 PF03572 Peptidase family S41 ABO_2276 PF13180 PDZ domain ABO_2277 PF04748 Divergent polysaccharide deacetylase ABO_2278 PF00977 Histidine biosynthesis protein ABO_2279 PF00977 Histidine biosynthesis protein ABO_2280 PF00117 Glutamine amidotransferase class-I ABO_2281 PF00475 Imidazoleglycerol-phosphate dehydratase ABO_2283 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2283 PF07689 KaiB domain ABO_2283 PF00512 His Kinase A (phospho-acceptor) domain ABO_2285 PF10576 Iron-sulfur binding domain of endonuclease III ABO_2285 PF00633 Helix-hairpin-helix motif ABO_2285 PF00730 HhH-GPD superfamily base excision DNA repair protein ABO_2285 PF14815 NUDIX domain ABO_2286 PF04362 Bacterial Fe(2+) trafficking ABO_2287 PF13276 HTH-like domain ABO_2287 PF13333 Integrase core domain ABO_2287 PF00665 Integrase core domain ABO_2288 PF00067 Cytochrome P450 ABO_2289 PF01435 Peptidase family M48 ABO_2290 PF01467 Cytidylyltransferase-like ABO_2290 PF00294 pfkB family carbohydrate kinase ABO_2292 PF03279 Bacterial lipid A biosynthesis acyltransferase ABO_2295 PF00535 Glycosyl transferase family 2 ABO_2297 PF13439 Glycosyltransferase Family 4 ABO_2297 PF00534 Glycosyl transferases group 1 ABO_2298 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABO_2300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ABO_2301 PF01063 Amino-transferase class IV ABO_2302 PF08335 GlnD PII-uridylyltransferase ABO_2302 PF03710 Glutamate-ammonia ligase adenylyltransferase ABO_2303 PF00437 Type II/IV secretion system protein ABO_2304 PF01865 Protein of unknown function DUF47 ABO_2305 PF01384 Phosphate transporter family ABO_2306 PF00696 Amino acid kinase family ABO_2306 PF00583 Acetyltransferase (GNAT) family ABO_2312 PF00920 Dehydratase family ABO_2315 PF00111 2Fe-2S iron-sulfur cluster binding domain ABO_2316 PF04403 Paraquat-inducible protein A ABO_2317 PF02470 MlaD protein ABO_2320 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ABO_2321 PF02602 Uroporphyrinogen-III synthase HemD ABO_2322 PF03900 Porphobilinogen deaminase, C-terminal domain ABO_2322 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABO_2323 PF00072 Response regulator receiver domain ABO_2323 PF04397 LytTr DNA-binding domain ABO_2324 PF07694 5TMR of 5TMR-LYT ABO_2324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2324 PF06580 Histidine kinase ABO_2325 PF00206 Lyase ABO_2325 PF14698 Argininosuccinate lyase C-terminal ABO_2326 PF14760 Rnk N-terminus ABO_2326 PF01272 Transcription elongation factor, GreA/GreB, C-term ABO_2328 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABO_2328 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABO_2331 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABO_2332 PF01678 Diaminopimelate epimerase ABO_2334 PF00589 Phage integrase family ABO_2334 PF02899 Phage integrase, N-terminal SAM-like domain ABO_2336 PF04287 tRNA pseudouridine synthase C ABO_2343 PF00186 Dihydrofolate reductase ABO_2344 PF00303 Thymidylate synthase ABO_2345 PF01790 Prolipoprotein diacylglyceryl transferase ABO_2346 PF01925 Sulfite exporter TauE/SafE ABO_2348 PF00391 PEP-utilising enzyme, mobile domain ABO_2348 PF05524 PEP-utilising enzyme, N-terminal ABO_2348 PF01590 GAF domain ABO_2348 PF02896 PEP-utilising enzyme, TIM barrel domain ABO_2349 PF00293 NUDIX domain ABO_2353 PF00403 Heavy-metal-associated domain ABO_2354 PF00398 Ribosomal RNA adenine dimethylase ABO_2359 PF00394 Multicopper oxidase ABO_2359 PF07731 Multicopper oxidase ABO_2359 PF07732 Multicopper oxidase ABO_2360 PF05275 Copper resistance protein B precursor (CopB) ABO_2361 PF00484 Carbonic anhydrase ABO_2362 PF04055 Radical SAM superfamily ABO_2362 PF06463 Molybdenum Cofactor Synthesis C ABO_2363 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABO_2364 PF01177 Asp/Glu/Hydantoin racemase ABO_2365 PF07685 CobB/CobQ-like glutamine amidotransferase domain ABO_2365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABO_2366 PF12557 Cob(I)alamin adenosyltransferase N terminal ABO_2366 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ABO_2367 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABO_2367 PF07685 CobB/CobQ-like glutamine amidotransferase domain ABO_2368 PF00005 ABC transporter ABO_2369 PF01032 FecCD transport family ABO_2370 PF01497 Periplasmic binding protein ABO_2371 PF07715 TonB-dependent Receptor Plug Domain ABO_2371 PF00593 TonB dependent receptor ABO_2374 PF03150 Di-haem cytochrome c peroxidase ABO_2376 PF00155 Aminotransferase class I and II ABO_2377 PF17113 Regulatory signalling modulator protein AmpE ABO_2377 PF03186 CobD/Cbib protein ABO_2378 PF02277 Phosphoribosyltransferase ABO_2380 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABO_2381 PF03831 PhnA domain ABO_2381 PF08274 PhnA Zinc-Ribbon ABO_2382 PF03454 MoeA C-terminal region (domain IV) ABO_2382 PF03453 MoeA N-terminal region (domain I and II) ABO_2382 PF00994 Probable molybdopterin binding domain ABO_2383 PF00994 Probable molybdopterin binding domain ABO_2384 PF00067 Cytochrome P450 ABO_2385 PF00924 Mechanosensitive ion channel ABO_2385 PF05552 Conserved TM helix ABO_2386 PF00753 Metallo-beta-lactamase superfamily ABO_2390 PF01894 Uncharacterised protein family UPF0047 ABO_2391 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABO_2391 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABO_2393 PF00743 Flavin-binding monooxygenase-like ABO_2394 PF00106 short chain dehydrogenase ABO_2397 PF00355 Rieske [2Fe-2S] domain ABO_2398 PF17810 Arginine decarboxylase helical bundle domain ABO_2398 PF17944 Arginine decarboxylase C-terminal helical extension ABO_2398 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABO_2399 PF17284 Spermidine synthase tetramerisation domain ABO_2401 PF01323 DSBA-like thioredoxin domain ABO_2402 PF03466 LysR substrate binding domain ABO_2402 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_2404 PF00106 short chain dehydrogenase ABO_2405 PF02470 MlaD protein ABO_2406 PF04403 Paraquat-inducible protein A ABO_2408 PF00270 DEAD/DEAH box helicase ABO_2408 PF00271 Helicase conserved C-terminal domain ABO_2412 PF18030 RimK PreATP-grasp domain ABO_2412 PF08443 RimK-like ATP-grasp domain ABO_2413 PF04381 Putative exonuclease, RdgC ABO_2414 PF00248 Aldo/keto reductase family ABO_2415 PF00561 alpha/beta hydrolase fold ABO_2416 PF09905 DNA-binding protein VF530 ABO_2418 PF00440 Bacterial regulatory proteins, tetR family ABO_2418 PF16925 Tetracyclin repressor-like, C-terminal domain ABO_2419 PF00465 Iron-containing alcohol dehydrogenase ABO_2421 PF02322 Cytochrome bd terminal oxidase subunit II ABO_2422 PF01654 Cytochrome bd terminal oxidase subunit I ABO_2424 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABO_2425 PF02798 Glutathione S-transferase, N-terminal domain ABO_2427 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABO_2427 PF03466 LysR substrate binding domain ABO_2430 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABO_2430 PF13192 Thioredoxin domain ABO_2431 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABO_2431 PF00578 AhpC/TSA family ABO_2433 PF08448 PAS fold ABO_2433 PF00990 Diguanylate cyclase, GGDEF domain ABO_2433 PF13426 PAS domain ABO_2433 PF00563 EAL domain ABO_2433 PF05231 MASE1 ABO_2433 PF08447 PAS fold ABO_2434 PF00912 Transglycosylase ABO_2437 PF00682 HMGL-like ABO_2437 PF08502 LeuA allosteric (dimerisation) domain ABO_2438 PF01037 Lrp/AsnC ligand binding domain ABO_2440 PF00378 Enoyl-CoA hydratase/isomerase ABO_2443 PF00990 Diguanylate cyclase, GGDEF domain ABO_2443 PF05230 MASE2 domain ABO_2445 PF04055 Radical SAM superfamily ABO_2446 PF01132 Elongation factor P (EF-P) OB domain ABO_2446 PF08207 Elongation factor P (EF-P) KOW-like domain ABO_2446 PF09285 Elongation factor P, C-terminal ABO_2447 PF00152 tRNA synthetases class II (D, K and N) ABO_2449 PF00561 alpha/beta hydrolase fold ABO_2452 PF02803 Thiolase, C-terminal domain ABO_2452 PF00108 Thiolase, N-terminal domain ABO_2453 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_2453 PF09317 Domain of unknown function (DUF1974) ABO_2453 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_2453 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_2454 PF07859 alpha/beta hydrolase fold ABO_2457 PF01272 Transcription elongation factor, GreA/GreB, C-term ABO_2457 PF03449 Transcription elongation factor, N-terminal ABO_2459 PF00490 Delta-aminolevulinic acid dehydratase ABO_2460 PF17941 Polyphosphate kinase C-terminal domain 1 ABO_2460 PF13089 Polyphosphate kinase N-terminal domain ABO_2460 PF13090 Polyphosphate kinase C-terminal domain 2 ABO_2460 PF02503 Polyphosphate kinase middle domain ABO_2461 PF02541 Ppx/GppA phosphatase family ABO_2462 PF00085 Thioredoxin ABO_2463 PF07497 Rho termination factor, RNA-binding domain ABO_2463 PF07498 Rho termination factor, N-terminal domain ABO_2463 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABO_2465 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ABO_2466 PF04030 D-arabinono-1,4-lactone oxidase ABO_2466 PF01565 FAD binding domain ABO_2469 PF02583 Metal-sensitive transcriptional repressor ABO_2471 PF00873 AcrB/AcrD/AcrF family ABO_2476 PF02583 Metal-sensitive transcriptional repressor ABO_2478 PF02659 Putative manganese efflux pump ABO_2481 PF00593 TonB dependent receptor ABO_2481 PF07715 TonB-dependent Receptor Plug Domain ABO_2482 PF01425 Amidase ABO_2483 PF00107 Zinc-binding dehydrogenase ABO_2483 PF08240 Alcohol dehydrogenase GroES-like domain ABO_2486 PF07660 Secretin and TonB N terminus short domain ABO_2486 PF00593 TonB dependent receptor ABO_2486 PF07715 TonB-dependent Receptor Plug Domain ABO_2487 PF00593 TonB dependent receptor ABO_2487 PF07715 TonB-dependent Receptor Plug Domain ABO_2489 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABO_2492 PF01553 Acyltransferase ABO_2493 PF03989 DNA gyrase C-terminal domain, beta-propeller ABO_2493 PF00521 DNA gyrase/topoisomerase IV, subunit A ABO_2494 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2494 PF01751 Toprim domain ABO_2494 PF00986 DNA gyrase B subunit, carboxyl terminus ABO_2494 PF00204 DNA gyrase B ABO_2495 PF05728 Uncharacterised protein family (UPF0227) ABO_2496 PF00149 Calcineurin-like phosphoesterase ABO_2497 PF06853 Protein of unknown function (DUF1249) ABO_2498 PF00293 NUDIX domain ABO_2499 PF13667 ThiC-associated domain ABO_2499 PF01964 Radical SAM ThiC family ABO_2500 PF02321 Outer membrane efflux protein ABO_2501 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABO_2502 PF01266 FAD dependent oxidoreductase ABO_2503 PF00248 Aldo/keto reductase family ABO_2506 PF01425 Amidase ABO_2508 PF07729 FCD domain ABO_2508 PF00392 Bacterial regulatory proteins, gntR family ABO_2510 PF02653 Branched-chain amino acid transport system / permease component ABO_2512 PF00005 ABC transporter ABO_2512 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABO_2513 PF00005 ABC transporter ABO_2515 PF01758 Sodium Bile acid symporter family ABO_2517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2517 PF00512 His Kinase A (phospho-acceptor) domain ABO_2517 PF00072 Response regulator receiver domain ABO_2517 PF09308 LuxQ, periplasmic ABO_2518 PF00072 Response regulator receiver domain ABO_2518 PF00196 Bacterial regulatory proteins, luxR family ABO_2519 PF00072 Response regulator receiver domain ABO_2519 PF00196 Bacterial regulatory proteins, luxR family ABO_2520 PF00512 His Kinase A (phospho-acceptor) domain ABO_2520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2522 PF00873 AcrB/AcrD/AcrF family ABO_2523 PF13533 Biotin-lipoyl like ABO_2528 PF10672 S-adenosylmethionine-dependent methyltransferase ABO_2528 PF17785 PUA-like domain ABO_2529 PF00909 Ammonium Transporter Family ABO_2530 PF00543 Nitrogen regulatory protein P-II ABO_2531 PF04380 Membrane fusogenic activity ABO_2532 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABO_2532 PF01078 Magnesium chelatase, subunit ChlI ABO_2536 PF12833 Helix-turn-helix domain ABO_2536 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_2537 PF00849 RNA pseudouridylate synthase ABO_2537 PF01479 S4 domain ABO_2538 PF13361 UvrD-like helicase C-terminal domain ABO_2538 PF00580 UvrD/REP helicase N-terminal domain ABO_2540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABO_2541 PF00512 His Kinase A (phospho-acceptor) domain ABO_2541 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABO_2543 PF00072 Response regulator receiver domain ABO_2543 PF00486 Transcriptional regulatory protein, C terminal ABO_2544 PF00893 Small Multidrug Resistance protein ABO_2545 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABO_2545 PF12833 Helix-turn-helix domain ABO_2555 PF01053 Cys/Met metabolism PLP-dependent enzyme ABO_2556 PF00378 Enoyl-CoA hydratase/isomerase ABO_2559 PF12795 Mechanosensitive ion channel porin domain ABO_2559 PF12794 Mechanosensitive ion channel inner membrane domain 1 ABO_2559 PF00924 Mechanosensitive ion channel ABO_2565 PF00675 Insulinase (Peptidase family M16) ABO_2565 PF05193 Peptidase M16 inactive domain ABO_2566 PF00448 SRP54-type protein, GTPase domain ABO_2566 PF02881 SRP54-type protein, helical bundle domain ABO_2567 PF00005 ABC transporter ABO_2568 PF18075 FtsX extracellular domain ABO_2569 PF04545 Sigma-70, region 4 ABO_2569 PF04542 Sigma-70 region 2 ABO_2569 PF00140 Sigma-70 factor, region 1.2 ABO_2570 PF04241 Protein of unknown function (DUF423) ABO_2571 PF02597 ThiS family ABO_2571 PF05690 Thiazole biosynthesis protein ThiG ABO_2572 PF05690 Thiazole biosynthesis protein ThiG ABO_2573 PF02390 Putative methyltransferase ABO_2576 PF00561 alpha/beta hydrolase fold ABO_2577 PF00561 alpha/beta hydrolase fold ABO_2577 PF07021 Methionine biosynthesis protein MetW ABO_2578 PF01725 Ham1 family ABO_2579 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABO_2580 PF04055 Radical SAM superfamily ABO_2580 PF06969 HemN C-terminal domain ABO_2581 PF00440 Bacterial regulatory proteins, tetR family ABO_2581 PF17932 Tetracyclin repressor-like, C-terminal domain ABO_2583 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABO_2583 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABO_2583 PF06827 Zinc finger found in FPG and IleRS ABO_2584 PF05378 Hydantoinase/oxoprolinase N-terminal region ABO_2584 PF01968 Hydantoinase/oxoprolinase ABO_2587 PF01810 LysE type translocator ABO_2591 PF02347 Glycine cleavage system P-protein ABO_2592 PF02347 Glycine cleavage system P-protein ABO_2593 PF01597 Glycine cleavage H-protein ABO_2594 PF01571 Aminomethyltransferase folate-binding domain ABO_2594 PF08669 Glycine cleavage T-protein C-terminal barrel domain ABO_2595 PF13205 Bacterial Ig-like domain ABO_2596 PF00528 Binding-protein-dependent transport system inner membrane component ABO_2598 PF01494 FAD binding domain ABO_2599 PF01494 FAD binding domain ABO_2600 PF05195 Aminopeptidase P, N-terminal domain ABO_2600 PF00557 Metallopeptidase family M24 ABO_2601 PF03695 Uncharacterised protein family (UPF0149) ABO_2603 PF05164 Cell division protein ZapA ABO_2604 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABO_2605 PF00291 Pyridoxal-phosphate dependent enzyme ABO_2605 PF00585 C-terminal regulatory domain of Threonine dehydratase ABO_2606 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABO_2612 PF01116 Fructose-bisphosphate aldolase class-II ABO_2613 PF00162 Phosphoglycerate kinase ABO_2614 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABO_2614 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABO_2615 PF02780 Transketolase, C-terminal domain ABO_2615 PF02779 Transketolase, pyrimidine binding domain ABO_2615 PF00456 Transketolase, thiamine diphosphate binding domain ABO_2616 PF01022 Bacterial regulatory protein, arsR family ABO_2617 PF02772 S-adenosylmethionine synthetase, central domain ABO_2617 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABO_2617 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABO_2618 PF05221 S-adenosyl-L-homocysteine hydrolase ABO_2618 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABO_2619 PF02219 Methylenetetrahydrofolate reductase ABO_2621 PF00224 Pyruvate kinase, barrel domain ABO_2621 PF02887 Pyruvate kinase, alpha/beta domain ABO_2623 PF01554 MatE ABO_2626 PF06865 Pyrimidine/purine nucleoside phosphorylase ABO_2629 PF01699 Sodium/calcium exchanger protein ABO_2630 PF00873 AcrB/AcrD/AcrF family ABO_2631 PF13533 Biotin-lipoyl like ABO_2632 PF08534 Redoxin ABO_2632 PF00462 Glutaredoxin ABO_2633 PF00210 Ferritin-like domain ABO_2634 PF03006 Haemolysin-III related ABO_2636 PF04143 Sulphur transport ABO_2638 PF00255 Glutathione peroxidase ABO_2640 PF01966 HD domain ABO_2645 PF00364 Biotin-requiring enzyme ABO_2645 PF00561 alpha/beta hydrolase fold ABO_2649 PF13462 Thioredoxin ABO_2650 PF00034 Cytochrome c ABO_2651 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABO_2652 PF01926 50S ribosome-binding GTPase ABO_2653 PF03334 Na+/H+ antiporter subunit ABO_2654 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABO_2656 PF00361 Proton-conducting membrane transporter ABO_2657 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABO_2658 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABO_2658 PF13244 Domain of unknown function (DUF4040) ABO_2658 PF00361 Proton-conducting membrane transporter ABO_2658 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABO_2659 PF01612 3'-5' exonuclease ABO_2659 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABO_2659 PF01367 5'-3' exonuclease, C-terminal SAM fold ABO_2659 PF00476 DNA polymerase family A ABO_2662 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_2662 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_2662 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_2665 PF00682 HMGL-like ABO_2666 PF00990 Diguanylate cyclase, GGDEF domain ABO_2666 PF05231 MASE1 ABO_2666 PF08447 PAS fold ABO_2666 PF13426 PAS domain ABO_2666 PF08448 PAS fold ABO_2666 PF00563 EAL domain ABO_2667 PF02325 YGGT family ABO_2668 PF03807 NADP oxidoreductase coenzyme F420-dependent ABO_2668 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABO_2669 PF01168 Alanine racemase, N-terminal domain ABO_2670 PF00437 Type II/IV secretion system protein ABO_2671 PF00437 Type II/IV secretion system protein ABO_2672 PF04102 SlyX ABO_2673 PF01169 Uncharacterized protein family UPF0016 ABO_2674 PF07152 YaeQ protein ABO_2677 PF03358 NADPH-dependent FMN reductase ABO_2678 PF01758 Sodium Bile acid symporter family ABO_2679 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABO_2680 PF01022 Bacterial regulatory protein, arsR family ABO_2681 PF01895 PhoU domain ABO_2682 PF00005 ABC transporter ABO_2683 PF00528 Binding-protein-dependent transport system inner membrane component ABO_2684 PF00528 Binding-protein-dependent transport system inner membrane component ABO_2687 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABO_2688 PF03061 Thioesterase superfamily ABO_2689 PF03480 Bacterial extracellular solute-binding protein, family 7 ABO_2690 PF13361 UvrD-like helicase C-terminal domain ABO_2690 PF00580 UvrD/REP helicase N-terminal domain ABO_2691 PF03707 Bacterial signalling protein N terminal repeat ABO_2691 PF00990 Diguanylate cyclase, GGDEF domain ABO_2691 PF00563 EAL domain ABO_2694 PF00924 Mechanosensitive ion channel ABO_2696 PF00561 alpha/beta hydrolase fold ABO_2696 PF00106 short chain dehydrogenase ABO_2699 PF13091 PLD-like domain ABO_2701 PF02872 5'-nucleotidase, C-terminal domain ABO_2701 PF00149 Calcineurin-like phosphoesterase ABO_2702 PF01068 ATP dependent DNA ligase domain ABO_2702 PF14743 DNA ligase OB-like domain ABO_2703 PF01625 Peptide methionine sulfoxide reductase ABO_2703 PF01641 SelR domain ABO_2704 PF05661 Protein of unknown function (DUF808) ABO_2706 PF00196 Bacterial regulatory proteins, luxR family ABO_2707 PF00487 Fatty acid desaturase ABO_2708 PF00301 Rubredoxin ABO_2709 PF00171 Aldehyde dehydrogenase family ABO_2710 PF05199 GMC oxidoreductase ABO_2710 PF00732 GMC oxidoreductase ABO_2715 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABO_2716 PF01730 UreF ABO_2717 PF04955 HupE / UreJ protein ABO_2718 PF02814 UreE urease accessory protein, N-terminal domain ABO_2718 PF05194 UreE urease accessory protein, C-terminal domain ABO_2719 PF01979 Amidohydrolase family ABO_2719 PF00449 Urease alpha-subunit, N-terminal domain ABO_2720 PF00699 Urease beta subunit ABO_2721 PF00547 Urease, gamma subunit ABO_2722 PF01774 UreD urease accessory protein ABO_2723 PF01380 SIS domain ABO_2724 PF00132 Bacterial transferase hexapeptide (six repeats) ABO_2724 PF14602 Hexapeptide repeat of succinyl-transferase ABO_2724 PF12804 MobA-like NTP transferase domain ABO_2725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABO_2725 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ABO_2726 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABO_2726 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABO_2727 PF00231 ATP synthase ABO_2728 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABO_2728 PF00306 ATP synthase alpha/beta chain, C terminal domain ABO_2728 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABO_2729 PF00213 ATP synthase delta (OSCP) subunit ABO_2730 PF00430 ATP synthase B/B' CF(0) ABO_2731 PF00137 ATP synthase subunit C ABO_2732 PF00119 ATP synthase A chain ABO_2734 PF17762 HTH domain found in ParB protein ABO_2734 PF02195 ParB-like nuclease domain ABO_2735 PF13614 AAA domain ABO_2736 PF02527 rRNA small subunit methyltransferase G ABO_2737 PF01134 Glucose inhibited division protein A ABO_2737 PF13932 GidA associated domain ABO_2738 PF02080 TrkA-C domain ABO_2738 PF00999 Sodium/hydrogen exchanger family ABO_2738 PF03471 Transporter associated domain ABO_2739 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABO_2739 PF02770 Acyl-CoA dehydrogenase, middle domain ABO_2739 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABO_2739 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABO_2741 PF00463 Isocitrate lyase family ABO_2742 PF06974 Protein of unknown function (DUF1298) ABO_2742 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABO_2743 PF01263 Aldose 1-epimerase ABO_2744 PF00313 'Cold-shock' DNA-binding domain ABO_2746 PF00873 AcrB/AcrD/AcrF family ABO_2747 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABO_2748 PF00501 AMP-binding enzyme ABO_2748 PF13193 AMP-binding enzyme C-terminal domain ABO_2749 PF00206 Lyase ABO_2749 PF10415 Fumarase C C-terminus ABO_2750 PF00440 Bacterial regulatory proteins, tetR family ABO_2752 PF01926 50S ribosome-binding GTPase ABO_2752 PF12631 MnmE helical domain ABO_2752 PF10396 GTP-binding protein TrmE N-terminus ABO_2753 PF02096 60Kd inner membrane protein ABO_2753 PF14849 YidC periplasmic domain ABO_2754 PF00825 Ribonuclease P ABO_2755 PF00468 Ribosomal protein L34