locus-tag	class	description
ABO_0001	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABO_0007	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ABO_0008	COG0751	glycine-tRNA ligase activity
ABO_0009	COG0752	glycyl-tRNA synthetase alpha subunit
ABO_0010	COG2818	Glycosylase
ABO_0013	COG1160	GTP binding
ABO_0014	COG1846	Transcriptional regulator
ABO_0017	COG1566	PFAM secretion protein HlyD family protein
ABO_0021	COG1960	acyl-CoA dehydrogenase activity
ABO_0023	COG5285	phytanoyl-CoA dioxygenase
ABO_0024	COG5487	UPF0391 membrane protein
ABO_0026	COG0435	Glutathione S-transferase
ABO_0027	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABO_0028	COG0583	DNA-binding transcription factor activity
ABO_0031	COG0745	RESPONSE REGULATOR receiver
ABO_0032	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABO_0035	COG0540	Belongs to the ATCase OTCase family
ABO_0036	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ABO_0037	COG3038	cytochrome b561
ABO_0038	COG2353	YceI-like domain
ABO_0044	COG0678	peroxiredoxin activity
ABO_0048	COG1666	GTP binding
ABO_0051	COG0519	Catalyzes the synthesis of GMP from XMP
ABO_0051	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABO_0053	COG0110	maltose O-acetyltransferase activity
ABO_0057	COG4399	Belongs to the UPF0754 family
ABO_0063	COG1944	ATP diphosphatase activity
ABO_0064	COG2703	oxygen carrier activity
ABO_0066	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABO_0067	COG0277	FAD linked oxidase domain protein
ABO_0068	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABO_0075	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABO_0075	COG0475	glutathione-regulated potassium exporter activity
ABO_0076	COG4773	Receptor
ABO_0079	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABO_0081	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABO_0083	COG2801	Transposase and inactivated derivatives
ABO_0085	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
ABO_0088	COG1309	transcriptional regulator
ABO_0089	COG0429	hydrolase of the alpha beta-hydrolase fold
ABO_0090	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABO_0096	COG0330	HflC and HflK could
ABO_0099	COG3038	cytochrome b561
ABO_0103	COG2201	protein-glutamate methylesterase activity
ABO_0106	COG0840	transmembrane signaling receptor activity
ABO_0112	COG1678	Uncharacterized ACR, COG1678
ABO_0113	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABO_0117	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABO_0118	COG0583	DNA-binding transcription factor activity
ABO_0122	COG3239	Fatty acid desaturase
ABO_0124	COG3121	Chaperone
ABO_0125	COG3188	usher protein
ABO_0127	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABO_0128	COG0569	domain protein
ABO_0129	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ABO_0130	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABO_0131	COG0242	peptide deformylase activity
ABO_0133	COG0758	DNA mediated transformation
ABO_0134	COG0009	L-threonylcarbamoyladenylate synthase
ABO_0135	COG0408	coproporphyrinogen oxidase activity
ABO_0136	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABO_0139	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABO_0140	COG0339	signal peptide processing
ABO_0147	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
ABO_0148	COG1024	Enoyl-CoA hydratase
ABO_0148	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABO_0153	COG1278	Cold shock
ABO_0155	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
ABO_0156	COG1121	(ABC) transporter
ABO_0157	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABO_0158	COG0534	Mate efflux family protein
ABO_0159	COG2199	diguanylate cyclase activity
ABO_0162	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABO_0163	COG1773	rubredoxin
ABO_0164	COG3161	chorismate lyase activity
ABO_0165	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABO_0168	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABO_0169	COG0583	DNA-binding transcription factor activity
ABO_0171	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ABO_0172	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABO_0176	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABO_0177	COG1758	RNA polymerase activity
ABO_0178	COG0194	GDP metabolic process
ABO_0179	COG3608	succinylglutamate desuccinylase aspartoacylase
ABO_0180	COG0129	dihydroxy-acid dehydratase activity
ABO_0184	COG0318	PFAM AMP-dependent synthetase and ligase
ABO_0185	COG1960	acyl-CoA dehydrogenase activity
ABO_0198	COG1309	transcriptional regulator
ABO_0200	COG0633	Ferredoxin
ABO_0205	COG1561	YicC-like family, N-terminal region
ABO_0206	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ABO_0207	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABO_0209	COG1309	transcriptional regulator
ABO_0210	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABO_0212	COG0756	dUTP diphosphatase activity
ABO_0213	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABO_0214	COG2003	Belongs to the UPF0758 family
ABO_0215	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABO_0216	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABO_0219	COG4964	Belongs to the GSP D family
ABO_0232	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABO_0238	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ABO_0244	COG0789	Transcriptional regulator
ABO_0246	COG3530	Putative quorum-sensing-regulated virulence factor
ABO_0248	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABO_0249	COG0577	efflux transmembrane transporter activity
ABO_0249	COG1136	(ABC) transporter
ABO_0250	COG1538	Outer membrane efflux protein
ABO_0251	COG0123	including yeast histone deacetylase and acetoin utilization protein
ABO_0253	COG0183	Belongs to the thiolase family
ABO_0254	COG0488	(ABC) transporter
ABO_0258	COG0545	Peptidyl-prolyl cis-trans isomerase
ABO_0260	COG1346	cytolysis
ABO_0262	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ABO_0263	COG2918	glutathione biosynthetic process
ABO_0264	COG2183	response to ionizing radiation
ABO_0266	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABO_0267	COG1566	PFAM secretion protein HlyD family protein
ABO_0268	COG0745	RESPONSE REGULATOR receiver
ABO_0269	COG2205	protein histidine kinase activity
ABO_0271	COG0569	domain protein
ABO_0272	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABO_0273	COG1295	ribonuclease BN
ABO_0274	COG1252	NADH dehydrogenase
ABO_0275	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
ABO_0276	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABO_0277	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABO_0278	COG1011	Hydrolase
ABO_0279	COG0494	nUDIX hydrolase
ABO_0280	COG1218	3'(2'),5'-bisphosphate nucleotidase
ABO_0282	COG2072	flavoprotein involved in K transport
ABO_0291	COG0488	(ABC) transporter
ABO_0294	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ABO_0296	COG0473	3-isopropylmalate dehydrogenase activity
ABO_0297	COG1131	(ABC) transporter
ABO_0298	COG0842	Transport permease protein
ABO_0299	COG3781	membrane
ABO_0300	COG3268	Saccharopine dehydrogenase
ABO_0302	COG0259	pyridoxamine-phosphate oxidase activity
ABO_0305	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABO_0306	COG0733	neurotransmitter:sodium symporter activity
ABO_0307	COG2914	Belongs to the UPF0125 (RnfH) family
ABO_0310	COG0497	DNA recombination
ABO_0312	COG1420	regulation of RNA biosynthetic process
ABO_0313	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABO_0314	COG0443	Heat shock 70 kDa protein
ABO_0315	COG0484	heat shock protein binding
ABO_0316	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ABO_0317	COG0505	Belongs to the CarA family
ABO_0318	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ABO_0319	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABO_0321	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ABO_0322	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABO_0323	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABO_0324	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABO_0325	COG0149	triose-phosphate isomerase activity
ABO_0327	COG0779	Required for maturation of 30S ribosomal subunits
ABO_0328	COG0195	Participates in both transcription termination and antitermination
ABO_0328	COG2251	uridine kinase activity
ABO_0329	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABO_0330	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABO_0332	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ABO_0333	COG1185	polyribonucleotide nucleotidyltransferase activity
ABO_0334	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABO_0335	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ABO_0336	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ABO_0337	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ABO_0338	COG1428	Deoxynucleoside kinase
ABO_0339	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABO_0342	COG3852	Histidine kinase
ABO_0344	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABO_0345	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABO_0347	COG1489	DNA binding
ABO_0348	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABO_0350	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABO_0351	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABO_0354	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABO_0355	COG0352	thiamine-phosphate diphosphorylase activity
ABO_0356	COG0352	thiamine-phosphate diphosphorylase activity
ABO_0356	COG0351	phosphomethylpyrimidine kinase
ABO_0356	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABO_0359	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ABO_0362	COG0316	Belongs to the HesB IscA family
ABO_0364	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABO_0365	COG0739	heme binding
ABO_0366	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABO_0369	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ABO_0371	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABO_0374	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABO_0375	COG0081	regulation of translation
ABO_0376	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABO_0377	COG0222	ribosome binding
ABO_0378	COG0085	RNA polymerase activity
ABO_0379	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ABO_0380	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ABO_0381	COG0049	tRNA binding
ABO_0382	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABO_0383	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABO_0385	COG1215	transferase activity, transferring glycosyl groups
ABO_0386	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABO_0395	COG0662	Cupin 2, conserved barrel domain protein
ABO_0395	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ABO_0396	COG0051	transcription antitermination factor activity, RNA binding
ABO_0397	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABO_0398	COG0088	Forms part of the polypeptide exit tunnel
ABO_0399	COG0089	rRNA binding
ABO_0400	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABO_0401	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ABO_0402	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABO_0403	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABO_0404	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ABO_0405	COG0255	Belongs to the universal ribosomal protein uL29 family
ABO_0406	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABO_0407	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABO_0408	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABO_0409	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABO_0410	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ABO_0411	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABO_0412	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABO_0413	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ABO_0414	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABO_0415	COG1841	ribosomal large subunit assembly
ABO_0416	COG0200	Binds to the 23S rRNA
ABO_0418	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABO_0419	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ABO_0420	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABO_0421	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABO_0422	COG0202	RNA polymerase activity
ABO_0423	COG0203	ribosomal protein L17
ABO_0429	COG2814	Major facilitator Superfamily
ABO_0432	COG3031	protein transport across the cell outer membrane
ABO_0436	COG2267	carboxylic ester hydrolase activity
ABO_0437	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABO_0440	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABO_0444	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABO_0451	COG0142	geranyltranstransferase activity
ABO_0452	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABO_0453	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABO_0454	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ABO_0455	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ABO_0456	COG0268	Binds directly to 16S ribosomal RNA
ABO_0457	COG0728	peptidoglycan biosynthetic process
ABO_0458	COG0196	riboflavin kinase activity
ABO_0459	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABO_0461	COG1047	Peptidyl-prolyl cis-trans
ABO_0462	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABO_0481	COG0028	Belongs to the TPP enzyme family
ABO_0484	COG0583	DNA-binding transcription factor activity
ABO_0485	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ABO_0486	COG1183	phosphatidylcholine synthase activity
ABO_0488	COG1597	lipid kinase activity
ABO_0492	COG0525	valine-tRNA ligase activity
ABO_0495	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ABO_0496	COG0795	lipopolysaccharide-transporting ATPase activity
ABO_0497	COG0795	lipopolysaccharide-transporting ATPase activity
ABO_0500	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABO_0501	COG0343	queuine tRNA-ribosyltransferase activity
ABO_0502	COG1862	Preprotein translocase
ABO_0503	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABO_0506	COG0436	Aminotransferase
ABO_0507	COG0154	amidase activity
ABO_0510	COG0473	3-isopropylmalate dehydrogenase activity
ABO_0511	COG1012	belongs to the aldehyde dehydrogenase family
ABO_0513	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
ABO_0515	COG0012	GTP binding
ABO_0516	COG0193	aminoacyl-tRNA hydrolase activity
ABO_0517	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABO_0518	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABO_0519	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ABO_0520	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABO_0522	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABO_0523	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABO_0524	COG2890	protein-(glutamine-N5) methyltransferase activity
ABO_0527	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABO_0528	COG0154	amidase activity
ABO_0529	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABO_0530	COG1077	Cell shape determining protein MreB Mrl
ABO_0531	COG1792	Involved in formation and maintenance of cell shape
ABO_0532	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABO_0533	COG0424	maF-like protein
ABO_0535	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABO_0536	COG0312	modulator of DNA gyrase
ABO_0539	COG3028	Belongs to the UPF0307 family
ABO_0540	COG0312	modulator of DNA gyrase
ABO_0541	COG2239	Acts as a magnesium transporter
ABO_0543	COG2181	nitrate reductase activity
ABO_0544	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ABO_0545	COG1140	nitrate reductase beta subunit
ABO_0546	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ABO_0547	COG2223	nitrite transmembrane transporter activity
ABO_0548	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABO_0549	COG1660	Displays ATPase and GTPase activities
ABO_0552	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ABO_0553	COG1137	ATPase activity
ABO_0556	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABO_0560	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABO_0561	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABO_0562	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABO_0563	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABO_0565	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABO_0566	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABO_0567	COG1597	lipid kinase activity
ABO_0569	COG2945	thiolester hydrolase activity
ABO_0570	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABO_0571	COG1960	acyl-CoA dehydrogenase activity
ABO_0575	COG0667	Aldo Keto reductase
ABO_0576	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABO_0577	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABO_0578	COG0723	plastoquinol--plastocyanin reductase activity
ABO_0579	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ABO_0580	COG2857	Cytochrome c1
ABO_0581	COG0625	glutathione transferase activity
ABO_0582	COG2969	positive regulation of protein catabolic process
ABO_0583	COG2823	Periplasmic or secreted lipoprotein
ABO_0585	COG0792	nuclease activity
ABO_0586	COG3107	peptidoglycan biosynthetic process
ABO_0588	COG0426	domain, Protein
ABO_0588	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABO_0589	COG2001	Belongs to the MraZ family
ABO_0590	COG0275	rRNA processing
ABO_0593	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABO_0594	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABO_0595	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABO_0596	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABO_0597	COG0772	Belongs to the SEDS family
ABO_0598	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABO_0599	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABO_0600	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABO_0601	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABO_0604	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ABO_0606	COG0739	heme binding
ABO_0607	COG0653	protein targeting
ABO_0609	COG0494	nUDIX hydrolase
ABO_0610	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABO_0611	COG0237	dephospho-CoA kinase activity
ABO_0612	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ABO_0615	COG4969	Belongs to the N-Me-Phe pilin family
ABO_0618	COG1115	amino acid carrier protein
ABO_0625	COG0745	RESPONSE REGULATOR receiver
ABO_0626	COG2205	protein histidine kinase activity
ABO_0627	COG2096	Adenosyltransferase
ABO_0628	COG4206	TonB-dependent receptor
ABO_0629	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABO_0630	COG2211	Major facilitator Superfamily
ABO_0632	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_0633	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ABO_0634	COG0459	protein refolding
ABO_0638	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABO_0643	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABO_0644	COG2315	Protein conserved in bacteria
ABO_0648	COG0183	Belongs to the thiolase family
ABO_0654	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
ABO_0655	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABO_0657	COG1611	Belongs to the LOG family
ABO_0659	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABO_0660	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABO_0661	COG2226	methyltransferase
ABO_0662	COG1733	regulation of RNA biosynthetic process
ABO_0663	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_0670	COG0633	Ferredoxin
ABO_0670	COG0543	2 iron, 2 sulfur cluster binding
ABO_0675	COG1309	transcriptional regulator
ABO_0676	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABO_0677	COG2755	lipolytic protein G-D-S-L family
ABO_0677	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ABO_0680	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ABO_0684	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABO_0686	COG0705	Rhomboid family
ABO_0695	COG1451	nucleotide metabolic process
ABO_0703	COG1012	belongs to the aldehyde dehydrogenase family
ABO_0708	COG0450	alkyl hydroperoxide reductase
ABO_0710	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABO_0712	COG0745	RESPONSE REGULATOR receiver
ABO_0713	COG2205	protein histidine kinase activity
ABO_0714	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABO_0716	COG0745	RESPONSE REGULATOR receiver
ABO_0716	COG3706	GGDEF domain
ABO_0717	COG3842	ATPase activity
ABO_0718	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABO_0719	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABO_0722	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABO_0723	COG0450	alkyl hydroperoxide reductase
ABO_0724	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABO_0725	COG0137	argininosuccinate synthase activity
ABO_0726	COG0346	lactoylglutathione lyase activity
ABO_0727	COG4067	protein conserved in archaea
ABO_0727	COG0189	ligase activity
ABO_0728	COG0189	ligase activity
ABO_0730	COG2046	Belongs to the sulfate adenylyltransferase family
ABO_0734	COG0513	Belongs to the DEAD box helicase family
ABO_0737	COG1192	Involved in chromosome partitioning
ABO_0739	COG0442	prolyl-tRNA aminoacylation
ABO_0742	COG0729	surface antigen
ABO_0743	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ABO_0745	COG2226	methyltransferase
ABO_0749	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABO_0750	COG0217	transcriptional regulatory protein
ABO_0751	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ABO_0752	COG0632	four-way junction helicase activity
ABO_0753	COG2255	four-way junction helicase activity
ABO_0754	COG0824	Thioesterase
ABO_0758	COG0823	Involved in the tonB-independent uptake of proteins
ABO_0761	COG0602	queuosine metabolic process
ABO_0762	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABO_0765	COG0789	Transcriptional regulator
ABO_0766	COG0415	Belongs to the DNA photolyase family
ABO_0769	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABO_0770	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABO_0771	COG4783	chaperone-mediated protein folding
ABO_0772	COG0425	Belongs to the sulfur carrier protein TusA family
ABO_0774	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABO_0775	COG2716	regulation of RNA biosynthetic process
ABO_0776	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABO_0778	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ABO_0779	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ABO_0784	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
ABO_0785	COG0047	phosphoribosylformylglycinamidine synthase activity
ABO_0785	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABO_0787	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABO_0788	COG2816	NAD+ diphosphatase activity
ABO_0789	COG2197	response regulator
ABO_0791	COG0494	nUDIX hydrolase
ABO_0794	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABO_0795	COG4536	flavin adenine dinucleotide binding
ABO_0797	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABO_0798	COG0228	four-way junction DNA binding
ABO_0799	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABO_0800	COG0336	Belongs to the RNA methyltransferase TrmD family
ABO_0801	COG0335	large ribosomal subunit rRNA binding
ABO_0802	COG2261	transglycosylase associated protein
ABO_0804	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABO_0805	COG0436	Aminotransferase
ABO_0807	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABO_0808	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABO_0812	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABO_0813	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABO_0814	COG2264	protein methyltransferase activity
ABO_0815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABO_0820	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ABO_0821	COG0590	tRNA wobble adenosine to inosine editing
ABO_0823	COG5001	Diguanylate cyclase
ABO_0828	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ABO_0829	COG0642	Histidine kinase
ABO_0832	COG4977	sequence-specific DNA binding
ABO_0833	COG1960	acyl-CoA dehydrogenase activity
ABO_0835	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABO_0837	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABO_0838	COG3088	subunit of a heme lyase
ABO_0838	COG4235	cytochrome complex assembly
ABO_0840	COG0563	adenylate kinase activity
ABO_0844	COG5016	pyruvate
ABO_0844	COG0511	ligase activity, forming carbon-carbon bonds
ABO_0845	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABO_0850	COG0477	Major facilitator Superfamily
ABO_0851	COG1116	anion transmembrane transporter activity
ABO_0851	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABO_0852	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABO_0853	COG1116	anion transmembrane transporter activity
ABO_0855	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABO_0859	COG3707	response regulator
ABO_0860	COG1116	anion transmembrane transporter activity
ABO_0860	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABO_0861	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ABO_0862	COG0583	DNA-binding transcription factor activity
ABO_0864	COG4807	Protein conserved in bacteria
ABO_0870	COG4133	protoheme IX ABC transporter activity
ABO_0874	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
ABO_0875	COG0189	ligase activity
ABO_0876	COG0625	glutathione transferase activity
ABO_0878	COG1131	(ABC) transporter
ABO_0879	COG0842	Transport permease protein
ABO_0880	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABO_0880	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ABO_0881	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
ABO_0884	COG0778	Nitroreductase
ABO_0895	COG0438	transferase activity, transferring glycosyl groups
ABO_0899	COG1943	Transposase
ABO_0900	COG4953	penicillin-binding protein 1C
ABO_0901	COG3383	formate dehydrogenase (NAD+) activity
ABO_0906	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABO_0907	COG0489	protein tyrosine kinase activity
ABO_0907	COG3206	protein involved in exopolysaccharide biosynthesis
ABO_0908	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABO_0910	COG1088	dTDP-glucose 4,6-dehydratase activity
ABO_0911	COG1091	dTDP-4-dehydrorhamnose reductase activity
ABO_0913	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ABO_0919	COG0438	transferase activity, transferring glycosyl groups
ABO_0920	COG0438	transferase activity, transferring glycosyl groups
ABO_0921	COG0297	glycogen (starch) synthase activity
ABO_0924	COG0438	transferase activity, transferring glycosyl groups
ABO_0925	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABO_0927	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABO_0929	COG3273	potassium ion transport
ABO_0929	COG0471	metal ion transport
ABO_0930	COG0529	Catalyzes the synthesis of activated sulfate
ABO_0931	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ABO_0934	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABO_0936	COG0166	Belongs to the GPI family
ABO_0938	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABO_0941	COG1215	transferase activity, transferring glycosyl groups
ABO_0943	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABO_0946	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
ABO_0948	COG3115	cell septum assembly
ABO_0949	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABO_0953	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABO_0954	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_0957	COG1960	acyl-CoA dehydrogenase activity
ABO_0959	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_0960	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_0964	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABO_0966	COG1309	transcriptional regulator
ABO_0967	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABO_0969	COG3788	relative of glutathione S-transferase, MAPEG superfamily
ABO_0970	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABO_0970	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ABO_0972	COG2205	protein histidine kinase activity
ABO_0972	COG0784	Response regulator, receiver
ABO_0972	COG5002	protein histidine kinase activity
ABO_0973	COG4106	trans-aconitate 2-methyltransferase activity
ABO_0974	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABO_0983	COG0183	Belongs to the thiolase family
ABO_0984	COG1960	acyl-CoA dehydrogenase activity
ABO_0988	COG1960	acyl-CoA dehydrogenase activity
ABO_0989	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABO_0990	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_0992	COG1309	transcriptional regulator
ABO_0994	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABO_0995	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABO_0997	COG2267	carboxylic ester hydrolase activity
ABO_0998	COG0308	aminopeptidase N
ABO_1004	COG3130	regulation of translation
ABO_1005	COG0116	Belongs to the methyltransferase superfamily
ABO_1005	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ABO_1009	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABO_1011	COG0589	response to stress
ABO_1017	COG1376	ErfK ybiS ycfS ynhG family protein
ABO_1018	COG1472	Belongs to the glycosyl hydrolase 3 family
ABO_1019	COG0668	transmembrane transport
ABO_1020	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ABO_1020	COG0037	tRNA processing
ABO_1022	COG1253	flavin adenine dinucleotide binding
ABO_1023	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABO_1024	COG2081	HI0933 family
ABO_1028	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABO_1029	COG1946	Acyl-CoA thioesterase
ABO_1030	COG1573	uracil-dna glycosylase
ABO_1032	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ABO_1033	COG1805	sodium ion transport
ABO_1036	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ABO_1037	COG2871	sodium ion transport
ABO_1038	COG1477	protein flavinylation
ABO_1042	COG0584	glycerophosphoryl diester phosphodiesterase
ABO_1044	COG0438	transferase activity, transferring glycosyl groups
ABO_1046	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABO_1047	COG2957	Belongs to the agmatine deiminase family
ABO_1049	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABO_1050	COG1136	(ABC) transporter
ABO_1053	COG0811	peptide transport
ABO_1054	COG0848	biopolymer transport protein
ABO_1055	COG1132	(ABC) transporter
ABO_1056	COG1663	tetraacyldisaccharide 4'-kinase activity
ABO_1057	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
ABO_1058	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABO_1059	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ABO_1060	COG1530	ribonuclease E activity
ABO_1062	COG0546	phosphoglycolate phosphatase activity
ABO_1063	COG0616	signal peptide processing
ABO_1063	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABO_1064	COG0424	maF-like protein
ABO_1065	COG1399	metal-binding, possibly nucleic acid-binding protein
ABO_1066	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABO_1067	COG0416	fatty acid biosynthetic process
ABO_1070	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABO_1071	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABO_1073	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABO_1074	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABO_1077	COG0084	hydrolase, TatD family'
ABO_1078	COG1322	Protein conserved in bacteria
ABO_1081	COG1104	cysteine desulfurase activity
ABO_1084	COG0515	serine threonine protein kinase
ABO_1084	COG2815	serine threonine protein kinase
ABO_1085	COG2223	nitrite transmembrane transporter activity
ABO_1086	COG2146	nitrite reductase [NAD(P)H] activity
ABO_1086	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABO_1087	COG2146	nitrite reductase [NAD(P)H] activity
ABO_1087	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABO_1088	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABO_1089	COG0243	molybdopterin cofactor binding
ABO_1091	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABO_1092	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABO_1095	COG3153	acetyltransferase
ABO_1095	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABO_1099	COG0583	DNA-binding transcription factor activity
ABO_1103	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_1106	COG2308	Evidence 4 Homologs of previously reported genes of
ABO_1108	COG1305	Transglutaminase-like
ABO_1110	COG2194	sulfuric ester hydrolase activity
ABO_1118	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
ABO_1119	COG2894	cell division
ABO_1120	COG0850	regulation of cytokinetic process
ABO_1121	COG1960	acyl-CoA dehydrogenase activity
ABO_1122	COG3118	belongs to the thioredoxin family
ABO_1124	COG0004	ammonium transporteR
ABO_1126	COG0746	molybdenum cofactor guanylyltransferase activity
ABO_1127	COG1199	ATP-dependent helicase activity
ABO_1128	COG1214	PFAM Peptidase M22, glycoprotease
ABO_1130	COG1968	undecaprenyl-diphosphatase activity
ABO_1131	COG0742	ribosomal rna small subunit methyltransferase
ABO_1132	COG2937	Belongs to the GPAT DAPAT family
ABO_1134	COG1012	belongs to the aldehyde dehydrogenase family
ABO_1136	COG1566	PFAM secretion protein HlyD family protein
ABO_1137	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABO_1139	COG1393	Belongs to the ArsC family
ABO_1140	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABO_1141	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
ABO_1142	COG0024	Methionine aminopeptidase
ABO_1143	COG0052	Belongs to the universal ribosomal protein uS2 family
ABO_1144	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABO_1145	COG0528	UMP kinase activity
ABO_1146	COG0233	cytoplasmic translational termination
ABO_1147	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABO_1148	COG0575	Belongs to the CDS family
ABO_1149	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABO_1153	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABO_1154	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABO_1155	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABO_1156	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABO_1157	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABO_1159	COG0825	malonyl-CoA metabolic process
ABO_1160	COG0037	tRNA processing
ABO_1161	COG0514	ATP-dependent DNA helicase (RecQ)
ABO_1162	COG0504	CTP synthase activity
ABO_1163	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ABO_1164	COG0148	phosphopyruvate hydratase activity
ABO_1165	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABO_1167	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABO_1168	COG0585	pseudouridine synthase activity
ABO_1169	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABO_1172	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ABO_1175	COG1454	alcohol dehydrogenase
ABO_1176	COG0824	Thioesterase
ABO_1177	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABO_1180	COG0501	Belongs to the peptidase M48B family
ABO_1181	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ABO_1183	COG0436	Aminotransferase
ABO_1185	COG0672	)-iron permease
ABO_1188	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABO_1190	COG0316	Belongs to the HesB IscA family
ABO_1190	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABO_1191	COG4783	chaperone-mediated protein folding
ABO_1192	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABO_1195	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABO_1200	COG1881	PFAM PEBP family protein
ABO_1204	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABO_1205	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABO_1207	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABO_1208	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABO_1209	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABO_1210	COG0740	serine-type endopeptidase activity
ABO_1211	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABO_1212	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABO_1214	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABO_1216	COG4172	Belongs to the ABC transporter superfamily
ABO_1217	COG4239	(ABC) transporter, permease
ABO_1218	COG4174	ABC transporter (Permease)
ABO_1219	COG4166	transmembrane transport
ABO_1220	COG4166	transmembrane transport
ABO_1221	COG0741	lytic transglycosylase activity
ABO_1221	COG1388	LysM domain
ABO_1222	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABO_1224	COG0328	RNA-DNA hybrid ribonuclease activity
ABO_1226	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABO_1228	COG2816	NAD+ diphosphatase activity
ABO_1230	COG0616	signal peptide processing
ABO_1231	COG0604	alcohol dehydrogenase
ABO_1232	COG2084	Dehydrogenase
ABO_1233	COG3622	Belongs to the hyi family
ABO_1234	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ABO_1236	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABO_1239	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABO_1240	COG1960	acyl-CoA dehydrogenase activity
ABO_1244	COG0702	epimerase
ABO_1245	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABO_1248	COG0039	L-malate dehydrogenase activity
ABO_1252	COG0271	Belongs to the BolA IbaG family
ABO_1256	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABO_1262	COG3706	GGDEF domain
ABO_1263	COG1960	acyl-CoA dehydrogenase activity
ABO_1264	COG1960	acyl-CoA dehydrogenase activity
ABO_1265	COG0300	oxidoreductase activity
ABO_1266	COG0037	tRNA processing
ABO_1267	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABO_1269	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABO_1272	COG2850	peptidyl-arginine hydroxylation
ABO_1274	COG2915	High frequency lysogenization protein hflD homolog
ABO_1275	COG0482	sulfurtransferase activity
ABO_1277	COG0315	cyclic pyranopterin monophosphate synthase activity
ABO_1278	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ABO_1279	COG0314	molybdopterin synthase activity
ABO_1283	COG1278	Cold shock
ABO_1285	COG0542	response to heat
ABO_1286	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABO_1287	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ABO_1288	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABO_1289	COG0492	ferredoxin-NADP+ reductase activity
ABO_1290	COG1674	ftsk spoiiie
ABO_1291	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABO_1292	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABO_1293	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ABO_1294	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABO_1295	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABO_1295	COG1648	precorrin-2 dehydrogenase activity
ABO_1296	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABO_1299	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABO_1301	COG0003	Pfam Anion-transporting ATPase
ABO_1303	COG1966	Carbon starvation protein
ABO_1305	COG0322	excinuclease ABC activity
ABO_1307	COG5002	protein histidine kinase activity
ABO_1307	COG0784	Response regulator, receiver
ABO_1308	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ABO_1320	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
ABO_1325	COG0668	transmembrane transport
ABO_1327	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ABO_1328	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABO_1329	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ABO_1333	COG0700	Nucleoside recognition
ABO_1338	COG3022	response to hydroperoxide
ABO_1340	COG0589	response to stress
ABO_1341	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABO_1347	COG0348	domain, Protein
ABO_1348	COG2010	Cytochrome c
ABO_1351	COG3278	Belongs to the heme-copper respiratory oxidase family
ABO_1352	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_1352	COG3321	synthase
ABO_1352	COG0604	alcohol dehydrogenase
ABO_1353	COG0583	DNA-binding transcription factor activity
ABO_1354	COG4974	Belongs to the 'phage' integrase family
ABO_1356	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABO_1363	COG2132	Multicopper oxidase
ABO_1365	COG0745	RESPONSE REGULATOR receiver
ABO_1366	COG5002	protein histidine kinase activity
ABO_1366	COG0784	Response regulator, receiver
ABO_1367	COG0789	Transcriptional regulator
ABO_1371	COG1405	negative regulation of cell septum assembly
ABO_1371	COG3012	SEC-C Motif Domain Protein
ABO_1373	COG1742	UPF0060 membrane protein
ABO_1385	COG0542	response to heat
ABO_1386	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABO_1388	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABO_1390	COG0180	Tryptophanyl-tRNA synthetase
ABO_1391	COG0009	L-threonylcarbamoyladenylate synthase
ABO_1392	COG0613	PHP domain protein
ABO_1393	COG2917	probably involved in intracellular septation
ABO_1394	COG2350	Protein conserved in bacteria
ABO_1397	COG0204	Acyl-transferase
ABO_1401	COG4181	ATPase activity
ABO_1402	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABO_1403	COG2814	Major facilitator Superfamily
ABO_1405	COG0789	Transcriptional regulator
ABO_1407	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABO_1408	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ABO_1409	COG0277	FAD linked oxidase domain protein
ABO_1411	COG2885	chlorophyll binding
ABO_1412	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABO_1412	COG2169	Transcriptional regulator
ABO_1413	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ABO_1418	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABO_1421	COG3339	Conserved Protein
ABO_1422	COG1192	Involved in chromosome partitioning
ABO_1424	COG0069	glutamate synthase activity
ABO_1425	COG0739	heme binding
ABO_1425	COG0741	lytic transglycosylase activity
ABO_1425	COG1196	nuclear chromosome segregation
ABO_1428	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
ABO_1429	COG2079	MmgE PrpD family protein
ABO_1430	COG2828	Protein conserved in bacteria
ABO_1432	COG0372	Belongs to the citrate synthase family
ABO_1433	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ABO_1434	COG1802	Transcriptional regulator
ABO_1436	COG0560	Phosphoserine phosphatase
ABO_1444	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ABO_1445	COG0235	Class ii aldolase
ABO_1446	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
ABO_1447	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
ABO_1448	COG2813	Specifically methylates the guanine in position
ABO_1449	COG1643	Atp-dependent helicase
ABO_1453	COG0714	Associated with various cellular activities
ABO_1456	COG1286	toxin biosynthetic process
ABO_1458	COG0285	dihydrofolate synthase activity
ABO_1459	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABO_1460	COG0159	tryptophan synthase activity
ABO_1461	COG0133	tryptophan synthase activity
ABO_1462	COG0135	phosphoribosylanthranilate isomerase activity
ABO_1463	COG0101	tRNA pseudouridine synthase activity
ABO_1465	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ABO_1467	COG0473	3-isopropylmalate dehydrogenase activity
ABO_1469	COG0066	3-isopropylmalate dehydratase activity
ABO_1470	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ABO_1473	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ABO_1474	COG2890	protein-(glutamine-N5) methyltransferase activity
ABO_1476	COG0004	ammonium transporteR
ABO_1478	COG1301	dicarboxylic acid transport
ABO_1479	COG4221	oxidoreductase activity
ABO_1485	COG0708	Exodeoxyribonuclease III
ABO_1487	COG2062	phosphohistidine phosphatase, SixA
ABO_1488	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABO_1489	COG0326	Molecular chaperone. Has ATPase activity
ABO_1492	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ABO_1493	COG0045	succinate-CoA ligase (ADP-forming) activity
ABO_1497	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABO_1498	COG1053	succinate dehydrogenase
ABO_1499	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABO_1500	COG2009	succinate dehydrogenase
ABO_1503	COG2084	Dehydrogenase
ABO_1509	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABO_1511	COG0589	response to stress
ABO_1512	COG0659	secondary active sulfate transmembrane transporter activity
ABO_1514	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABO_1516	COG2853	Lipoprotein
ABO_1518	COG3220	belongs to the UPF0276 family
ABO_1521	COG1643	Atp-dependent helicase
ABO_1525	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
ABO_1529	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABO_1530	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABO_1542	COG1254	Belongs to the acylphosphatase family
ABO_1543	COG1959	2 iron, 2 sulfur cluster binding
ABO_1543	COG1295	ribonuclease BN
ABO_1544	COG1393	Belongs to the ArsC family
ABO_1551	COG0714	Associated with various cellular activities
ABO_1552	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
ABO_1553	COG3101	peptidyl-lysine hydroxylation
ABO_1561	COG2814	Major facilitator Superfamily
ABO_1562	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
ABO_1563	COG0788	formyltetrahydrofolate deformylase activity
ABO_1566	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABO_1566	COG1024	Enoyl-CoA hydratase
ABO_1567	COG0183	Belongs to the thiolase family
ABO_1569	COG2840	Smr protein MutS2
ABO_1570	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABO_1571	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABO_1573	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ABO_1574	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABO_1577	COG0717	Belongs to the dCTP deaminase family
ABO_1578	COG0489	protein tyrosine kinase activity
ABO_1586	COG2813	Specifically methylates the guanine in position
ABO_1587	COG0741	lytic transglycosylase activity
ABO_1592	COG1309	transcriptional regulator
ABO_1598	COG0784	Response regulator, receiver
ABO_1598	COG2205	protein histidine kinase activity
ABO_1598	COG5002	protein histidine kinase activity
ABO_1599	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABO_1599	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABO_1600	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABO_1609	COG4657	Part of a membrane complex involved in electron transport
ABO_1610	COG2878	Part of a membrane complex involved in electron transport
ABO_1612	COG4658	electron transport chain
ABO_1613	COG4659	FMN binding
ABO_1614	COG4660	Part of a membrane complex involved in electron transport
ABO_1616	COG0786	glutamate:sodium symporter activity
ABO_1617	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABO_1619	COG1739	Uncharacterized protein family UPF0029
ABO_1622	COG3956	TIGRFAM MazG family protein
ABO_1623	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABO_1624	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABO_1627	COG2205	protein histidine kinase activity
ABO_1627	COG0784	Response regulator, receiver
ABO_1627	COG5002	protein histidine kinase activity
ABO_1628	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABO_1630	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABO_1631	COG0571	ribonuclease III activity
ABO_1634	COG0481	GTPase activity
ABO_1635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABO_1645	COG1024	Enoyl-CoA hydratase
ABO_1645	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABO_1646	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ABO_1647	COG3226	Transcriptional regulator
ABO_1648	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ABO_1651	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABO_1652	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABO_1652	COG1024	Enoyl-CoA hydratase
ABO_1653	COG0183	Belongs to the thiolase family
ABO_1661	COG0789	Transcriptional regulator
ABO_1662	COG0484	heat shock protein binding
ABO_1663	COG0318	PFAM AMP-dependent synthetase and ligase
ABO_1665	COG0210	DNA helicase
ABO_1674	COG0577	efflux transmembrane transporter activity
ABO_1674	COG1136	(ABC) transporter
ABO_1677	COG0735	belongs to the Fur family
ABO_1680	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABO_1683	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ABO_1684	COG0546	phosphoglycolate phosphatase activity
ABO_1686	COG0175	sulfate reduction
ABO_1688	COG4771	TonB-dependent receptor
ABO_1695	COG0513	Belongs to the DEAD box helicase family
ABO_1696	COG3360	Dodecin
ABO_1697	COG0778	Nitroreductase
ABO_1701	COG1960	acyl-CoA dehydrogenase activity
ABO_1702	COG1960	acyl-CoA dehydrogenase activity
ABO_1705	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABO_1705	COG1902	pentaerythritol trinitrate reductase activity
ABO_1709	COG0745	RESPONSE REGULATOR receiver
ABO_1712	COG0183	Belongs to the thiolase family
ABO_1713	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_1718	COG1309	transcriptional regulator
ABO_1720	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
ABO_1721	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
ABO_1722	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABO_1722	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ABO_1723	COG3639	organic phosphonate transmembrane transporter activity
ABO_1725	COG0709	Synthesizes selenophosphate from selenide and ATP
ABO_1728	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
ABO_1729	COG3264	Mechanosensitive ion channel
ABO_1729	COG1196	nuclear chromosome segregation
ABO_1734	COG1901	pseudouridine methyltransferase
ABO_1741	COG0284	orotidine-5'-phosphate decarboxylase activity
ABO_1744	COG0776	regulation of translation
ABO_1746	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ABO_1747	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABO_1748	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABO_1749	COG0077	Prephenate dehydratase
ABO_1749	COG1605	Chorismate mutase
ABO_1750	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ABO_1752	COG0402	S-adenosylhomocysteine deaminase activity
ABO_1754	COG0546	phosphoglycolate phosphatase activity
ABO_1755	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_1766	COG2983	Belongs to the UPF0260 family
ABO_1767	COG3100	YcgL domain-containing protein
ABO_1768	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
ABO_1769	COG0588	phosphoglycerate mutase activity
ABO_1772	COG1960	acyl-CoA dehydrogenase activity
ABO_1773	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABO_1774	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ABO_1780	COG1695	Transcriptional regulator
ABO_1782	COG2977	Belongs to the P-Pant transferase superfamily
ABO_1783	COG1819	glycosyl
ABO_1784	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABO_1786	COG2801	Transposase and inactivated derivatives
ABO_1791	COG0427	acetyl-CoA hydrolase
ABO_1793	COG0523	cobalamin synthesis protein
ABO_1794	COG0418	dihydroorotase activity
ABO_1796	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ABO_1797	COG0527	aspartate kinase activity
ABO_1798	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABO_1800	COG2137	regulation of response to DNA damage stimulus
ABO_1801	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABO_1802	COG1546	Belongs to the CinA family
ABO_1803	COG0217	transcriptional regulatory protein
ABO_1806	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABO_1808	COG2963	transposase activity
ABO_1809	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABO_1810	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABO_1816	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABO_1817	COG1509	lysine 2,3-aminomutase activity
ABO_1818	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABO_1819	COG1074	ATP-dependent DNA helicase activity
ABO_1820	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABO_1821	COG3784	Protein of unknown function (DUF1318)
ABO_1824	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ABO_1828	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABO_1829	COG0732	type I restriction modification DNA specificity domain
ABO_1830	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ABO_1832	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
ABO_1836	COG0776	regulation of translation
ABO_1837	COG0072	phenylalanine-tRNA ligase activity
ABO_1838	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ABO_1839	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ABO_1840	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABO_1841	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ABO_1843	COG0492	ferredoxin-NADP+ reductase activity
ABO_1847	COG0842	Transport permease protein
ABO_1848	COG1129	ABC transporter
ABO_1848	COG0842	Transport permease protein
ABO_1849	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABO_1850	COG0519	Catalyzes the synthesis of GMP from XMP
ABO_1850	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABO_1852	COG1570	exodeoxyribonuclease VII activity
ABO_1856	COG1160	GTP binding
ABO_1857	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABO_1859	COG0124	histidyl-tRNA synthetase
ABO_1860	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ABO_1861	COG1426	Protein conserved in bacteria
ABO_1863	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ABO_1864	COG0105	UTP biosynthetic process
ABO_1865	COG0719	Fe-S assembly protein
ABO_1866	COG0396	ATPase activity
ABO_1867	COG0719	Fe-S assembly protein
ABO_1868	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABO_1869	COG0316	Belongs to the HesB IscA family
ABO_1871	COG2166	iron-sulfur cluster assembly
ABO_1872	COG1104	cysteine desulfurase activity
ABO_1877	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABO_1881	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABO_1882	COG1704	LemA family
ABO_1883	COG2827	Endonuclease containing a URI domain
ABO_1889	COG3842	ATPase activity
ABO_1891	COG3665	Urea carboxylase-associated protein
ABO_1892	COG0439	Biotin carboxylase
ABO_1894	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABO_1899	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABO_1900	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABO_1905	COG1612	heme a metabolic process
ABO_1906	COG0109	protoheme IX farnesyltransferase activity
ABO_1908	COG1704	LemA family
ABO_1909	COG0501	Belongs to the peptidase M48B family
ABO_1912	COG1278	Cold shock
ABO_1913	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABO_1921	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABO_1922	COG3047	cAMP biosynthetic process
ABO_1924	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ABO_1933	COG1999	signal sequence binding
ABO_1934	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABO_1935	COG1702	phosphate starvation-inducible protein PhoH
ABO_1936	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABO_1937	COG4535	Mg2 and Co2 transporter CorC
ABO_1940	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ABO_1944	COG3453	Protein conserved in bacteria
ABO_1944	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABO_1946	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ABO_1947	COG0495	leucyl-tRNA aminoacylation
ABO_1951	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ABO_1954	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ABO_1955	COG0768	penicillin binding
ABO_1956	COG0772	Belongs to the SEDS family
ABO_1957	COG2951	lytic endotransglycosylase activity
ABO_1959	COG1686	Belongs to the peptidase S11 family
ABO_1961	COG2921	Belongs to the UPF0250 family
ABO_1963	COG0321	lipoyl(octanoyl) transferase activity
ABO_1964	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABO_1966	COG3015	lipoprotein NlpE involved in copper resistance
ABO_1967	COG0811	peptide transport
ABO_1972	COG0163	prenyltransferase activity
ABO_1974	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABO_1975	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
ABO_1980	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABO_1981	COG0410	ABC transporter
ABO_1982	COG1131	(ABC) transporter
ABO_1985	COG0683	leucine binding
ABO_1986	COG2198	Histidine kinase
ABO_1986	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABO_1986	COG2205	protein histidine kinase activity
ABO_1986	COG0784	Response regulator, receiver
ABO_1987	COG0745	RESPONSE REGULATOR receiver
ABO_1989	COG0205	6-phosphofructokinase activity
ABO_1990	COG2233	PERMEase
ABO_1991	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABO_1994	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABO_1998	COG3642	lipopolysaccharide core region biosynthetic process
ABO_2000	COG0642	Histidine kinase
ABO_2001	COG0745	RESPONSE REGULATOR receiver
ABO_2006	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABO_2008	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ABO_2009	COG0511	ligase activity, forming carbon-carbon bonds
ABO_2011	COG2264	protein methyltransferase activity
ABO_2015	COG0138	bifunctional purine biosynthesis protein purh
ABO_2016	COG0151	Belongs to the GarS family
ABO_2018	COG2205	protein histidine kinase activity
ABO_2018	COG4999	Histidine kinase
ABO_2018	COG3437	response regulator, receiver
ABO_2018	COG3850	Histidine kinase
ABO_2019	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABO_2020	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
ABO_2021	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ABO_2022	COG1765	OsmC-like protein
ABO_2024	COG0134	indole-3-glycerol-phosphate synthase activity
ABO_2025	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABO_2026	COG0512	Glutamine amidotransferase of anthranilate synthase
ABO_2031	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
ABO_2034	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABO_2035	COG1845	cytochrome c oxidase, subunit III
ABO_2036	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABO_2037	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABO_2038	COG0477	Major facilitator Superfamily
ABO_2041	COG0791	NLP P60 protein
ABO_2042	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABO_2045	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ABO_2046	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABO_2047	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABO_2048	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABO_2049	COG2967	ApaG domain
ABO_2052	COG0617	tRNA 3'-terminal CCA addition
ABO_2056	COG0302	gtp cyclohydrolase
ABO_2056	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABO_2057	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ABO_2058	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ABO_2059	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABO_2060	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ABO_2061	COG1610	YqeY-like protein
ABO_2063	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABO_2076	COG4456	Virulence-associated protein
ABO_2081	COG2801	Transposase and inactivated derivatives
ABO_2082	COG2963	transposase activity
ABO_2084	COG0443	Heat shock 70 kDa protein
ABO_2086	COG0513	Belongs to the DEAD box helicase family
ABO_2091	COG4774	siderophore transport
ABO_2095	COG4615	Cyclic peptide transporter
ABO_2098	COG1960	acyl-CoA dehydrogenase activity
ABO_2099	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABO_2100	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABO_2101	COG2832	Protein of unknown function (DUF454)
ABO_2102	COG1960	acyl-CoA dehydrogenase activity
ABO_2103	COG2835	tetraacyldisaccharide 4'-kinase activity
ABO_2109	COG4221	oxidoreductase activity
ABO_2112	COG0300	oxidoreductase activity
ABO_2114	COG0537	adenosine 5'-monophosphoramidase activity
ABO_2118	COG4251	negative regulation of phosphorylation
ABO_2118	COG5001	Diguanylate cyclase
ABO_2118	COG3706	GGDEF domain
ABO_2118	COG2203	Gaf domain
ABO_2119	COG1017	nitric oxide dioxygenase activity
ABO_2119	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABO_2120	COG1959	2 iron, 2 sulfur cluster binding
ABO_2124	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ABO_2126	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABO_2130	COG2070	2-Nitropropane dioxygenase
ABO_2132	COG3437	response regulator, receiver
ABO_2134	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABO_2135	COG0215	cysteine-tRNA ligase activity
ABO_2137	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ABO_2142	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABO_2144	COG1469	GTP cyclohydrolase I activity
ABO_2146	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ABO_2147	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABO_2148	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ABO_2151	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABO_2152	COG0662	Cupin 2, conserved barrel domain protein
ABO_2155	COG0784	Response regulator, receiver
ABO_2155	COG2205	protein histidine kinase activity
ABO_2158	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABO_2164	COG1722	exodeoxyribonuclease VII activity
ABO_2165	COG0142	geranyltranstransferase activity
ABO_2166	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABO_2167	COG5001	Diguanylate cyclase
ABO_2167	COG3706	GGDEF domain
ABO_2167	COG2203	Gaf domain
ABO_2167	COG4251	negative regulation of phosphorylation
ABO_2168	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABO_2169	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABO_2170	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ABO_2171	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ABO_2174	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABO_2174	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABO_2175	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABO_2176	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ABO_2177	COG0488	(ABC) transporter
ABO_2179	COG1595	DNA-templated transcription, initiation
ABO_2182	COG2226	methyltransferase
ABO_2186	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABO_2187	COG0305	Participates in initiation and elongation during chromosome replication
ABO_2188	COG0359	binds to the 23S rRNA
ABO_2189	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABO_2191	COG0360	Binds together with S18 to 16S ribosomal RNA
ABO_2192	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABO_2193	COG0557	exoribonuclease II activity
ABO_2197	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABO_2198	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ABO_2200	COG0330	HflC and HflK could
ABO_2201	COG0330	HflC and HflK could
ABO_2202	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABO_2203	COG1923	regulation of RNA biosynthetic process
ABO_2204	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABO_2205	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABO_2206	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABO_2207	COG0802	atpase or kinase
ABO_2208	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABO_2208	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABO_2210	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABO_2211	COG1162	GTPase activity
ABO_2213	COG0688	phosphatidylethanolamine metabolic process
ABO_2216	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ABO_2217	COG2226	methyltransferase
ABO_2218	COG2267	carboxylic ester hydrolase activity
ABO_2219	COG0156	8-amino-7-oxononanoate synthase activity
ABO_2220	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ABO_2221	COG1040	competence protein
ABO_2225	COG2154	pterin-4-alpha-carbinolamine dehydratase
ABO_2227	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ABO_2228	COG0493	'glutamate synthase
ABO_2229	COG0067	glutamate synthase
ABO_2229	COG0069	glutamate synthase activity
ABO_2229	COG0070	glutamate synthase
ABO_2231	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ABO_2232	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ABO_2239	COG0281	malic enzyme
ABO_2240	COG0254	rRNA binding
ABO_2241	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABO_2242	COG0018	arginyl-trna synthetase
ABO_2244	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABO_2245	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABO_2246	COG2226	methyltransferase
ABO_2248	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABO_2249	COG0140	phosphoribosyl-ATP diphosphatase activity
ABO_2250	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABO_2251	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ABO_2256	COG1490	D-aminoacyl-tRNA deacylase activity
ABO_2259	COG2204	response regulator
ABO_2260	COG3852	Histidine kinase
ABO_2264	COG0482	sulfurtransferase activity
ABO_2265	COG3083	sulfuric ester hydrolase activity
ABO_2271	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABO_2272	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
ABO_2274	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ABO_2275	COG4942	peptidase
ABO_2276	COG0793	Belongs to the peptidase S41A family
ABO_2277	COG2861	carbohydrate metabolic process
ABO_2278	COG0107	imidazoleglycerol-phosphate synthase activity
ABO_2279	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ABO_2281	COG0131	Imidazoleglycerol-phosphate dehydratase
ABO_2283	COG2205	protein histidine kinase activity
ABO_2285	COG1194	a g-specific adenine glycosylase
ABO_2286	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
ABO_2287	COG2801	Transposase and inactivated derivatives
ABO_2289	COG0501	Belongs to the peptidase M48B family
ABO_2290	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
ABO_2290	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ABO_2292	COG1560	Kdo2-lipid A biosynthetic process
ABO_2295	COG1215	transferase activity, transferring glycosyl groups
ABO_2297	COG0438	transferase activity, transferring glycosyl groups
ABO_2300	COG0859	PFAM glycosyl transferase family 9
ABO_2303	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ABO_2304	COG1392	Phosphate transport regulator
ABO_2305	COG0306	phosphate transporter
ABO_2306	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ABO_2306	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ABO_2316	COG2995	paraquat-inducible protein a
ABO_2317	COG3008	intermembrane lipid transfer
ABO_2317	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABO_2320	COG2959	enzyme of heme biosynthesis
ABO_2322	COG0181	hydroxymethylbilane synthase activity
ABO_2324	COG3275	phosphorelay sensor kinase activity
ABO_2325	COG0165	Argininosuccinate lyase
ABO_2326	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABO_2328	COG0019	diaminopimelate decarboxylase activity
ABO_2331	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABO_2332	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ABO_2334	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ABO_2336	COG3098	single-species biofilm formation
ABO_2344	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ABO_2346	COG0730	response to heat
ABO_2349	COG0494	nUDIX hydrolase
ABO_2354	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABO_2359	COG2132	Multicopper oxidase
ABO_2361	COG0288	reversible hydration of carbon dioxide
ABO_2362	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABO_2363	COG1047	Peptidyl-prolyl cis-trans
ABO_2364	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABO_2365	COG1492	cobalamin metabolic process
ABO_2368	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ABO_2369	COG4139	cobalamin transport
ABO_2371	COG4206	TonB-dependent receptor
ABO_2374	COG1858	cytochrome C peroxidase
ABO_2377	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ABO_2378	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABO_2381	COG2824	Alkylphosphonate utilization operon protein PhnA
ABO_2383	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABO_2385	COG0668	transmembrane transport
ABO_2386	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABO_2390	COG0432	Pfam Uncharacterised protein family UPF0047
ABO_2391	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABO_2393	COG2072	flavoprotein involved in K transport
ABO_2398	COG1166	arginine decarboxylase activity
ABO_2402	COG0583	DNA-binding transcription factor activity
ABO_2405	COG3008	intermembrane lipid transfer
ABO_2406	COG2995	paraquat-inducible protein a
ABO_2408	COG0513	Belongs to the DEAD box helicase family
ABO_2412	COG0189	ligase activity
ABO_2412	COG4067	protein conserved in archaea
ABO_2413	COG2974	May be involved in recombination
ABO_2414	COG0656	L-ascorbic acid biosynthetic process
ABO_2415	COG0596	Alpha beta hydrolase
ABO_2416	COG4628	conserved protein (DUF2132)
ABO_2418	COG1309	transcriptional regulator
ABO_2419	COG1979	alcohol dehydrogenase
ABO_2421	COG1294	oxidase, subunit
ABO_2422	COG1271	oxidase subunit
ABO_2424	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABO_2425	COG0625	glutathione transferase activity
ABO_2427	COG0583	DNA-binding transcription factor activity
ABO_2431	COG0450	alkyl hydroperoxide reductase
ABO_2433	COG5001	Diguanylate cyclase
ABO_2433	COG5002	protein histidine kinase activity
ABO_2433	COG3447	MASE1 domain protein
ABO_2434	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABO_2437	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABO_2440	COG1024	Enoyl-CoA hydratase
ABO_2442	COG3830	Belongs to the UPF0237 family
ABO_2442	COG0560	Phosphoserine phosphatase
ABO_2443	COG3706	GGDEF domain
ABO_2445	COG1509	lysine 2,3-aminomutase activity
ABO_2446	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABO_2447	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABO_2449	COG0596	Alpha beta hydrolase
ABO_2452	COG0183	Belongs to the thiolase family
ABO_2453	COG1960	acyl-CoA dehydrogenase activity
ABO_2457	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABO_2465	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ABO_2478	COG1971	Probably functions as a manganese efflux pump
ABO_2481	COG4771	TonB-dependent receptor
ABO_2482	COG0154	amidase activity
ABO_2483	COG0604	alcohol dehydrogenase
ABO_2487	COG4773	Receptor
ABO_2489	COG3122	Protein conserved in bacteria
ABO_2492	COG0204	Acyl-transferase
ABO_2495	COG3150	esterase
ABO_2496	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABO_2497	COG3151	Protein conserved in bacteria
ABO_2498	COG0494	nUDIX hydrolase
ABO_2499	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ABO_2500	COG1538	Outer membrane efflux protein
ABO_2501	COG1519	Transferase
ABO_2503	COG0667	Aldo Keto reductase
ABO_2510	COG0559	Belongs to the binding-protein-dependent transport system permease family
ABO_2512	COG0411	ABC transporter
ABO_2513	COG0410	ABC transporter
ABO_2517	COG0784	Response regulator, receiver
ABO_2517	COG2205	protein histidine kinase activity
ABO_2519	COG4566	intracellular signal transduction
ABO_2520	COG4191	Histidine kinase
ABO_2523	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABO_2529	COG0004	ammonium transporteR
ABO_2530	COG0347	Belongs to the P(II) protein family
ABO_2531	COG2960	long-chain fatty acid transporting porin activity
ABO_2534	COG1028	Short-chain dehydrogenase reductase Sdr
ABO_2537	COG1187	pseudouridine synthase activity
ABO_2538	COG0210	DNA helicase
ABO_2544	COG2076	Multidrug Resistance protein
ABO_2556	COG1024	Enoyl-CoA hydratase
ABO_2559	COG3264	Mechanosensitive ion channel
ABO_2559	COG1196	nuclear chromosome segregation
ABO_2563	COG0742	ribosomal rna small subunit methyltransferase
ABO_2565	COG0612	Peptidase, M16
ABO_2566	COG0552	protein localization to endoplasmic reticulum
ABO_2567	COG2884	Cell division ATP-binding protein ftsE
ABO_2568	COG2177	Part of the ABC transporter FtsEX involved in
ABO_2570	COG2363	Small membrane protein
ABO_2572	COG2022	thiamine diphosphate biosynthetic process
ABO_2573	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABO_2576	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABO_2577	COG2813	Specifically methylates the guanine in position
ABO_2577	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABO_2579	COG1671	Belongs to the UPF0178 family
ABO_2580	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABO_2581	COG1309	transcriptional regulator
ABO_2583	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ABO_2587	COG1280	lysine exporter protein (LysE YggA)
ABO_2591	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABO_2592	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ABO_2593	COG0509	glycine decarboxylation via glycine cleavage system
ABO_2594	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ABO_2596	COG1178	ABC-type Fe3 transport system permease component
ABO_2598	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABO_2599	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABO_2600	COG0006	proline dipeptidase activity
ABO_2601	COG3079	Belongs to the UPF0149 family
ABO_2604	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABO_2605	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABO_2606	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ABO_2613	COG0126	phosphoglycerate kinase activity
ABO_2615	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABO_2616	COG0640	Transcriptional regulator
ABO_2617	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABO_2618	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABO_2619	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABO_2621	COG0469	pyruvate kinase activity
ABO_2623	COG0534	Mate efflux family protein
ABO_2626	COG3123	guanosine phosphorylase activity
ABO_2632	COG0678	peroxiredoxin activity
ABO_2632	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABO_2633	COG0783	Belongs to the Dps family
ABO_2634	COG1272	protein, Hemolysin III
ABO_2635	COG0640	Transcriptional regulator
ABO_2638	COG0386	Belongs to the glutathione peroxidase family
ABO_2649	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABO_2652	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABO_2653	COG1320	monovalent cation:proton antiporter activity
ABO_2654	COG2212	antiporter activity
ABO_2656	COG0651	ATP synthesis coupled electron transport
ABO_2657	COG1006	Multisubunit Na H antiporter MnhC subunit
ABO_2658	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABO_2658	COG2111	Na H antiporter
ABO_2662	COG1960	acyl-CoA dehydrogenase activity
ABO_2665	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABO_2666	COG5001	Diguanylate cyclase
ABO_2666	COG3447	MASE1 domain protein
ABO_2666	COG5002	protein histidine kinase activity
ABO_2672	COG2900	Belongs to the SlyX family
ABO_2673	COG2119	membrane
ABO_2674	COG4681	YaeQ
ABO_2677	COG0431	NADPH-dependent FMN reductase
ABO_2678	COG0798	PFAM Bile acid sodium symporter
ABO_2679	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABO_2680	COG0640	Transcriptional regulator
ABO_2681	COG0704	Plays a role in the regulation of phosphate uptake
ABO_2682	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABO_2683	COG0581	inorganic phosphate transmembrane transporter activity
ABO_2684	COG0573	inorganic phosphate transmembrane transporter activity
ABO_2688	COG1607	acyl-coa hydrolase
ABO_2689	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
ABO_2690	COG0210	DNA helicase
ABO_2694	COG0668	transmembrane transport
ABO_2699	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABO_2702	COG1793	dna ligase
ABO_2703	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABO_2703	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ABO_2704	COG2354	Protein conserved in bacteria
ABO_2706	COG2909	trisaccharide binding
ABO_2707	COG3239	Fatty acid desaturase
ABO_2708	COG1773	rubredoxin
ABO_2715	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABO_2716	COG0830	nickel cation binding
ABO_2718	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
ABO_2719	COG0804	urea catabolic process
ABO_2720	COG0832	Belongs to the urease beta subunit family
ABO_2721	COG0831	urea catabolic process
ABO_2722	COG0829	nickel cation binding
ABO_2724	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ABO_2725	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ABO_2726	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ABO_2727	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ABO_2728	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ABO_2729	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ABO_2730	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ABO_2732	COG0356	it plays a direct role in the translocation of protons across the membrane
ABO_2734	COG1475	DNA binding
ABO_2735	COG1192	Involved in chromosome partitioning
ABO_2736	COG0357	Ribosomal RNA small subunit methyltransferase G
ABO_2737	COG0445	tRNA wobble uridine modification
ABO_2738	COG3263	regulation of cellular component size
ABO_2739	COG1960	acyl-CoA dehydrogenase activity
ABO_2742	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABO_2743	COG0676	glucose-6-phosphate 1-epimerase activity
ABO_2744	COG1278	Cold shock
ABO_2746	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABO_2748	COG0318	PFAM AMP-dependent synthetase and ligase
ABO_2750	COG1309	transcriptional regulator
ABO_2752	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABO_2753	COG0706	membrane insertase activity
ABO_2754	COG0594	ribonuclease P activity
ABO_2755	COG0230	Belongs to the bacterial ribosomal protein bL34 family