locus-tag class description AS19_00010 PF00308 Bacterial dnaA protein AS19_00010 PF08299 Bacterial dnaA protein helix-turn-helix AS19_00010 PF11638 DnaA N-terminal domain AS19_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain AS19_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain AS19_00020 PF02767 DNA polymerase III beta subunit, central domain AS19_00030 PF02463 RecF/RecN/SMC N terminal domain AS19_00040 PF00204 DNA gyrase B AS19_00040 PF00986 DNA gyrase B subunit, carboxyl terminus AS19_00040 PF18053 DNA gyrase B subunit insert domain AS19_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_00040 PF01751 Toprim domain AS19_00050 PF00816 H-NS histone family AS19_00080 PF05746 DALR anticodon binding domain AS19_00080 PF02092 Glycyl-tRNA synthetase beta subunit AS19_00090 PF02091 Glycyl-tRNA synthetase alpha subunit AS19_00100 PF03352 Methyladenine glycosylase AS19_00140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AS19_00140 PF01926 50S ribosome-binding GTPase AS19_00150 PF01047 MarR family AS19_00160 PF04632 Fusaric acid resistance protein family AS19_00180 PF13533 Biotin-lipoyl like AS19_00200 PF12833 Helix-turn-helix domain AS19_00200 PF02311 AraC-like ligand binding domain AS19_00210 PF00171 Aldehyde dehydrogenase family AS19_00220 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_00220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_00220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_00230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS19_00230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS19_00240 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AS19_00250 PF07043 Protein of unknown function (DUF1328) AS19_00260 PF05726 Pirin C-terminal cupin domain AS19_00260 PF02678 Pirin AS19_00270 PF13409 Glutathione S-transferase, N-terminal domain AS19_00280 PF02525 Flavodoxin-like fold AS19_00290 PF03466 LysR substrate binding domain AS19_00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_00310 PF00512 His Kinase A (phospho-acceptor) domain AS19_00310 PF08521 Two-component sensor kinase N-terminal AS19_00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_00320 PF00072 Response regulator receiver domain AS19_00320 PF00486 Transcriptional regulatory protein, C terminal AS19_00330 PF08534 Redoxin AS19_00340 PF13098 Thioredoxin-like domain AS19_00350 PF01979 Amidohydrolase family AS19_00360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS19_00360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS19_00370 PF00156 Phosphoribosyl transferase domain AS19_00380 PF01292 Prokaryotic cytochrome b561 AS19_00390 PF04264 YceI-like domain AS19_00430 PF01636 Phosphotransferase enzyme family AS19_00440 PF07859 alpha/beta hydrolase fold AS19_00450 PF08534 Redoxin AS19_00490 PF04461 Protein of unknown function (DUF520) AS19_00520 PF00958 GMP synthase C terminal domain AS19_00520 PF00117 Glutamine amidotransferase class-I AS19_00520 PF02540 NAD synthase AS19_00550 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_00570 PF07690 Major Facilitator Superfamily AS19_00590 PF04286 Protein of unknown function (DUF445) AS19_00610 PF00472 RF-1 domain AS19_00630 PF00698 Acyl transferase domain AS19_00630 PF08240 Alcohol dehydrogenase GroES-like domain AS19_00630 PF14765 Polyketide synthase dehydratase AS19_00630 PF00550 Phosphopantetheine attachment site AS19_00630 PF16197 Ketoacyl-synthetase C-terminal extension AS19_00630 PF08659 KR domain AS19_00630 PF00109 Beta-ketoacyl synthase, N-terminal domain AS19_00630 PF02801 Beta-ketoacyl synthase, C-terminal domain AS19_00650 PF18381 YcaO cyclodehydratase C-terminal domain AS19_00650 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AS19_00670 PF01814 Hemerythrin HHE cation binding domain AS19_00690 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS19_00700 PF01565 FAD binding domain AS19_00700 PF02913 FAD linked oxidases, C-terminal domain AS19_00710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS19_00710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS19_00710 PF01842 ACT domain AS19_00780 PF02254 TrkA-N domain AS19_00780 PF00999 Sodium/hydrogen exchanger family AS19_00790 PF00593 TonB dependent receptor AS19_00790 PF07715 TonB-dependent Receptor Plug Domain AS19_00810 PF13302 Acetyltransferase (GNAT) domain AS19_00830 PF01467 Cytidylyltransferase-like AS19_00850 PF13333 Integrase core domain AS19_00850 PF13276 HTH-like domain AS19_00850 PF00665 Integrase core domain AS19_00870 PF00732 GMC oxidoreductase AS19_00870 PF05199 GMC oxidoreductase AS19_00890 PF00171 Aldehyde dehydrogenase family AS19_00900 PF00440 Bacterial regulatory proteins, tetR family AS19_00910 PF00561 alpha/beta hydrolase fold AS19_00920 PF04452 RNA methyltransferase AS19_00940 PF00892 EamA-like transporter family AS19_00970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS19_00980 PF01145 SPFH domain / Band 7 family AS19_01000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS19_01010 PF01292 Prokaryotic cytochrome b561 AS19_01030 PF12706 Beta-lactamase superfamily domain AS19_01050 PF01339 CheB methylesterase AS19_01050 PF00072 Response regulator receiver domain AS19_01060 PF00072 Response regulator receiver domain AS19_01060 PF01584 CheW-like domain AS19_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_01060 PF01627 Hpt domain AS19_01070 PF01739 CheR methyltransferase, SAM binding domain AS19_01070 PF03705 CheR methyltransferase, all-alpha domain AS19_01080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS19_01080 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AS19_01090 PF01584 CheW-like domain AS19_01100 PF00072 Response regulator receiver domain AS19_01110 PF00072 Response regulator receiver domain AS19_01120 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AS19_01120 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AS19_01150 PF02622 Uncharacterized ACR, COG1678 AS19_01160 PF03652 Holliday junction resolvase AS19_01170 PF04116 Fatty acid hydroxylase superfamily AS19_01190 PF00756 Putative esterase AS19_01200 PF08240 Alcohol dehydrogenase GroES-like domain AS19_01200 PF00107 Zinc-binding dehydrogenase AS19_01210 PF03466 LysR substrate binding domain AS19_01210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_01230 PF13419 Haloacid dehalogenase-like hydrolase AS19_01240 PF01425 Amidase AS19_01260 PF00487 Fatty acid desaturase AS19_01280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AS19_01280 PF02753 Pili assembly chaperone PapD, C-terminal domain AS19_01290 PF00577 Outer membrane usher protein AS19_01290 PF13954 PapC N-terminal domain AS19_01290 PF13953 PapC C-terminal domain AS19_01310 PF02386 Cation transport protein AS19_01320 PF02080 TrkA-C domain AS19_01320 PF02254 TrkA-N domain AS19_01330 PF01029 NusB family AS19_01330 PF01189 16S rRNA methyltransferase RsmB/F AS19_01340 PF00551 Formyl transferase AS19_01340 PF02911 Formyl transferase, C-terminal domain AS19_01350 PF01327 Polypeptide deformylase AS19_01370 PF17782 DprA winged helix domain AS19_01370 PF02481 DNA recombination-mediator protein A AS19_01380 PF01300 Telomere recombination AS19_01390 PF01218 Coproporphyrinogen III oxidase AS19_01400 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AS19_01400 PF01488 Shikimate / quinate 5-dehydrogenase AS19_01400 PF08501 Shikimate dehydrogenase substrate binding domain AS19_01430 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_01450 PF01432 Peptidase family M3 AS19_01490 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_01490 PF12833 Helix-turn-helix domain AS19_01500 PF00970 Oxidoreductase FAD-binding domain AS19_01500 PF00175 Oxidoreductase NAD-binding domain AS19_01520 PF02654 Cobalamin-5-phosphate synthase AS19_01530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS19_01530 PF00378 Enoyl-CoA hydratase/isomerase AS19_01530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS19_01580 PF00313 'Cold-shock' DNA-binding domain AS19_01600 PF01297 Zinc-uptake complex component A periplasmic AS19_01610 PF00005 ABC transporter AS19_01620 PF00950 ABC 3 transport family AS19_01630 PF01554 MatE AS19_01640 PF17155 Gammaproteobacterial periplasmic sensor domain AS19_01640 PF00990 Diguanylate cyclase, GGDEF domain AS19_01670 PF18113 Rubredoxin binding C-terminal domain AS19_01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_01680 PF00301 Rubredoxin AS19_01690 PF04345 Chorismate lyase AS19_01700 PF01040 UbiA prenyltransferase family AS19_01710 PF00486 Transcriptional regulatory protein, C terminal AS19_01710 PF00072 Response regulator receiver domain AS19_01720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_01720 PF00512 His Kinase A (phospho-acceptor) domain AS19_01720 PF00989 PAS fold AS19_01720 PF11808 Phosphate regulon sensor protein PhoR AS19_01730 PF00271 Helicase conserved C-terminal domain AS19_01730 PF17191 RecG wedge domain AS19_01730 PF00270 DEAD/DEAH box helicase AS19_01740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_01740 PF03466 LysR substrate binding domain AS19_01760 PF00731 AIR carboxylase AS19_01770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AS19_01770 PF02222 ATP-grasp domain AS19_01800 PF01042 Endoribonuclease L-PSP AS19_01810 PF02824 TGS domain AS19_01810 PF04607 Region found in RelA / SpoT proteins AS19_01810 PF13291 ACT domain AS19_01830 PF01192 RNA polymerase Rpb6 AS19_01840 PF00625 Guanylate kinase AS19_01850 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AS19_01860 PF00920 Dehydratase family AS19_01900 PF13193 AMP-binding enzyme C-terminal domain AS19_01900 PF00501 AMP-binding enzyme AS19_01910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_01910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_01910 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_01930 PF00732 GMC oxidoreductase AS19_01930 PF05199 GMC oxidoreductase AS19_01950 PF00106 short chain dehydrogenase AS19_01960 PF00743 Flavin-binding monooxygenase-like AS19_01980 PF13205 Bacterial Ig-like domain AS19_01990 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AS19_02000 PF00743 Flavin-binding monooxygenase-like AS19_02030 PF00106 short chain dehydrogenase AS19_02050 PF00440 Bacterial regulatory proteins, tetR family AS19_02050 PF17932 Tetracyclin repressor-like, C-terminal domain AS19_02060 PF12833 Helix-turn-helix domain AS19_02060 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_02070 PF00111 2Fe-2S iron-sulfur cluster binding domain AS19_02080 PF00067 Cytochrome P450 AS19_02090 PF05199 GMC oxidoreductase AS19_02090 PF00732 GMC oxidoreductase AS19_02100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_02100 PF14759 Reductase C-terminal AS19_02120 PF03755 YicC-like family, N-terminal region AS19_02120 PF08340 Domain of unknown function (DUF1732) AS19_02130 PF03725 3' exoribonuclease family, domain 2 AS19_02130 PF01138 3' exoribonuclease family, domain 1 AS19_02140 PF00156 Phosphoribosyl transferase domain AS19_02160 PF00440 Bacterial regulatory proteins, tetR family AS19_02170 PF00696 Amino acid kinase family AS19_02180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS19_02180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS19_02180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS19_02180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS19_02190 PF00692 dUTPase AS19_02200 PF02441 Flavoprotein AS19_02200 PF04127 DNA / pantothenate metabolism flavoprotein AS19_02210 PF04002 RadC-like JAB domain AS19_02220 PF00830 Ribosomal L28 family AS19_02230 PF00471 Ribosomal protein L33 AS19_02270 PF04972 BON domain AS19_02270 PF13629 Pilus formation protein N terminal region AS19_02270 PF00263 Bacterial type II and III secretion system protein AS19_02290 PF00437 Type II/IV secretion system protein AS19_02410 PF02028 BCCT, betaine/carnitine/choline family transporter AS19_02470 PF03600 Citrate transporter AS19_02530 PF13411 MerR HTH family regulatory protein AS19_02550 PF12843 Putative quorum-sensing-regulated virulence factor AS19_02570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS19_02580 PF12704 MacB-like periplasmic core domain AS19_02580 PF02687 FtsX-like permease family AS19_02580 PF00005 ABC transporter AS19_02590 PF02321 Outer membrane efflux protein AS19_02600 PF00850 Histone deacetylase domain AS19_02620 PF02803 Thiolase, C-terminal domain AS19_02620 PF00108 Thiolase, N-terminal domain AS19_02630 PF00005 ABC transporter AS19_02630 PF12848 ABC transporter AS19_02650 PF00202 Aminotransferase class-III AS19_02650 PF06968 Biotin and Thiamin Synthesis associated domain AS19_02650 PF04055 Radical SAM superfamily AS19_02670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS19_02670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AS19_02680 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AS19_02690 PF04172 LrgB-like family AS19_02700 PF03788 LrgA family AS19_02710 PF02600 Disulfide bond formation protein DsbB AS19_02720 PF04262 Glutamate-cysteine ligase AS19_02730 PF16921 Tex protein YqgF-like domain AS19_02730 PF09371 Tex-like protein N-terminal domain AS19_02730 PF00575 S1 RNA binding domain AS19_02730 PF17674 HHH domain AS19_02740 PF00072 Response regulator receiver domain AS19_02750 PF00873 AcrB/AcrD/AcrF family AS19_02760 PF00529 HlyD membrane-fusion protein of T1SS AS19_02760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS19_02770 PF00072 Response regulator receiver domain AS19_02770 PF00486 Transcriptional regulatory protein, C terminal AS19_02780 PF00512 His Kinase A (phospho-acceptor) domain AS19_02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_02780 PF00672 HAMP domain AS19_02800 PF02080 TrkA-C domain AS19_02800 PF02254 TrkA-N domain AS19_02810 PF02386 Cation transport protein AS19_02820 PF03631 Virulence factor BrkB AS19_02830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_02840 PF01293 Phosphoenolpyruvate carboxykinase AS19_02850 PF01430 Hsp33 protein AS19_02860 PF01479 S4 domain AS19_02870 PF13419 Haloacid dehalogenase-like hydrolase AS19_02880 PF00293 NUDIX domain AS19_02890 PF00459 Inositol monophosphatase family AS19_02900 PF12146 Serine aminopeptidase, S33 AS19_02920 PF00743 Flavin-binding monooxygenase-like AS19_02930 PF03060 Nitronate monooxygenase AS19_02960 PF00106 short chain dehydrogenase AS19_02980 PF00743 Flavin-binding monooxygenase-like AS19_03010 PF00005 ABC transporter AS19_03010 PF12848 ABC transporter AS19_03040 PF00762 Ferrochelatase AS19_03060 PF18324 Hypothetical protein TT1725 AS19_03060 PF00180 Isocitrate/isopropylmalate dehydrogenase AS19_03070 PF00005 ABC transporter AS19_03080 PF01061 ABC-2 type transporter AS19_03090 PF01062 Bestrophin, RFP-TM, chloride channel AS19_03100 PF03435 Saccharopine dehydrogenase NADP binding domain AS19_03120 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AS19_03120 PF01243 Pyridoxamine 5'-phosphate oxidase AS19_03150 PF01668 SmpB protein AS19_03160 PF00209 Sodium:neurotransmitter symporter family AS19_03170 PF03658 RnfH family Ubiquitin AS19_03180 PF04355 SmpA / OmlA family AS19_03200 PF01475 Ferric uptake regulator family AS19_03210 PF02463 RecF/RecN/SMC N terminal domain AS19_03230 PF01628 HrcA protein C terminal domain AS19_03230 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AS19_03240 PF01025 GrpE AS19_03250 PF00012 Hsp70 protein AS19_03260 PF00226 DnaJ domain AS19_03260 PF01556 DnaJ C terminal domain AS19_03260 PF00684 DnaJ central domain AS19_03270 PF05173 Dihydrodipicolinate reductase, C-terminus AS19_03270 PF01113 Dihydrodipicolinate reductase, N-terminus AS19_03280 PF00117 Glutamine amidotransferase class-I AS19_03280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS19_03290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS19_03290 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS19_03290 PF02142 MGS-like domain AS19_03300 PF03449 Transcription elongation factor, N-terminal AS19_03300 PF01272 Transcription elongation factor, GreA/GreB, C-term AS19_03310 PF01985 CRS1 / YhbY (CRM) domain AS19_03320 PF01728 FtsJ-like methyltransferase AS19_03330 PF01434 Peptidase family M41 AS19_03330 PF06480 FtsH Extracellular AS19_03330 PF17862 AAA+ lid domain AS19_03330 PF00004 ATPase family associated with various cellular activities (AAA) AS19_03340 PF00809 Pterin binding enzyme AS19_03350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS19_03350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS19_03350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS19_03350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS19_03360 PF00121 Triosephosphate isomerase AS19_03370 PF03840 Preprotein translocase SecG subunit AS19_03380 PF02576 RimP N-terminal domain AS19_03380 PF17384 RimP C-terminal SH3 domain AS19_03390 PF13184 NusA-like KH domain AS19_03390 PF08529 NusA N-terminal domain AS19_03400 PF00009 Elongation factor Tu GTP binding domain AS19_03400 PF04760 Translation initiation factor IF-2, N-terminal region AS19_03400 PF08364 Bacterial translation initiation factor IF-2 associated region AS19_03400 PF11987 Translation-initiation factor 2 AS19_03410 PF02033 Ribosome-binding factor A AS19_03420 PF09157 Pseudouridine synthase II TruB, C-terminal AS19_03420 PF16198 tRNA pseudouridylate synthase B C-terminal domain AS19_03420 PF01509 TruB family pseudouridylate synthase (N terminal domain) AS19_03430 PF00312 Ribosomal protein S15 AS19_03440 PF03725 3' exoribonuclease family, domain 2 AS19_03440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AS19_03440 PF01138 3' exoribonuclease family, domain 1 AS19_03440 PF00013 KH domain AS19_03440 PF00575 S1 RNA binding domain AS19_03450 PF13193 AMP-binding enzyme C-terminal domain AS19_03450 PF00501 AMP-binding enzyme AS19_03450 PF16177 Acetyl-coenzyme A synthetase N-terminus AS19_03460 PF02261 Aspartate decarboxylase AS19_03470 PF02569 Pantoate-beta-alanine ligase AS19_03480 PF02548 Ketopantoate hydroxymethyltransferase AS19_03490 PF01712 Deoxynucleoside kinase AS19_03500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS19_03510 PF12627 Probable RNA and SrmB- binding site of polymerase A AS19_03510 PF01743 Poly A polymerase head domain AS19_03510 PF12626 Polymerase A arginine-rich C-terminus AS19_03520 PF00158 Sigma-54 interaction domain AS19_03520 PF02954 Bacterial regulatory protein, Fis family AS19_03520 PF00072 Response regulator receiver domain AS19_03530 PF00989 PAS fold AS19_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_03530 PF00512 His Kinase A (phospho-acceptor) domain AS19_03550 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS19_03560 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS19_03590 PF03749 Sugar fermentation stimulation protein RE domain AS19_03590 PF17746 SfsA N-terminal OB domain AS19_03600 PF01636 Phosphotransferase enzyme family AS19_03620 PF00294 pfkB family carbohydrate kinase AS19_03630 PF14814 Bifunctional transglycosylase second domain AS19_03630 PF00905 Penicillin binding protein transpeptidase domain AS19_03630 PF00912 Transglycosylase AS19_03630 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AS19_03650 PF04073 Aminoacyl-tRNA editing domain AS19_03660 PF00202 Aminotransferase class-III AS19_03670 PF02581 Thiamine monophosphate synthase AS19_03680 PF08543 Phosphomethylpyrimidine kinase AS19_03680 PF03070 TENA/THI-4/PQQC family AS19_03680 PF02581 Thiamine monophosphate synthase AS19_03700 PF00654 Voltage gated chloride channel AS19_03710 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS19_03710 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS19_03740 PF01521 Iron-sulphur cluster biosynthesis AS19_03750 PF01569 PAP2 superfamily AS19_03760 PF03702 Anhydro-N-acetylmuramic acid kinase AS19_03780 PF01551 Peptidase family M23 AS19_03780 PF04225 Opacity-associated protein A LysM-like domain AS19_03790 PF00579 tRNA synthetases class I (W and Y) AS19_03800 PF00501 AMP-binding enzyme AS19_03810 PF08279 HTH domain AS19_03810 PF03099 Biotin/lipoate A/B protein ligase family AS19_03810 PF02237 Biotin protein ligase C terminal domain AS19_03820 PF03309 Type III pantothenate kinase AS19_03840 PF00009 Elongation factor Tu GTP binding domain AS19_03840 PF03144 Elongation factor Tu domain 2 AS19_03840 PF03143 Elongation factor Tu C-terminal domain AS19_03850 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AS19_03860 PF02357 Transcription termination factor nusG AS19_03860 PF00467 KOW motif AS19_03870 PF00298 Ribosomal protein L11, RNA binding domain AS19_03870 PF03946 Ribosomal protein L11, N-terminal domain AS19_03880 PF00687 Ribosomal protein L1p/L10e family AS19_03890 PF00466 Ribosomal protein L10 AS19_03900 PF00542 Ribosomal protein L7/L12 C-terminal domain AS19_03900 PF16320 Ribosomal protein L7/L12 dimerisation domain AS19_03910 PF04565 RNA polymerase Rpb2, domain 3 AS19_03910 PF04560 RNA polymerase Rpb2, domain 7 AS19_03910 PF00562 RNA polymerase Rpb2, domain 6 AS19_03910 PF10385 RNA polymerase beta subunit external 1 domain AS19_03910 PF04561 RNA polymerase Rpb2, domain 2 AS19_03910 PF04563 RNA polymerase beta subunit AS19_03920 PF04998 RNA polymerase Rpb1, domain 5 AS19_03920 PF05000 RNA polymerase Rpb1, domain 4 AS19_03920 PF00623 RNA polymerase Rpb1, domain 2 AS19_03920 PF04983 RNA polymerase Rpb1, domain 3 AS19_03920 PF04997 RNA polymerase Rpb1, domain 1 AS19_03930 PF00164 Ribosomal protein S12/S23 AS19_03940 PF00177 Ribosomal protein S7p/S5e AS19_03950 PF03144 Elongation factor Tu domain 2 AS19_03950 PF00009 Elongation factor Tu GTP binding domain AS19_03950 PF00679 Elongation factor G C-terminus AS19_03950 PF14492 Elongation Factor G, domain II AS19_03950 PF03764 Elongation factor G, domain IV AS19_03960 PF03143 Elongation factor Tu C-terminal domain AS19_03960 PF03144 Elongation factor Tu domain 2 AS19_03960 PF00009 Elongation factor Tu GTP binding domain AS19_03970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS19_03970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS19_03970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS19_03990 PF07238 PilZ domain AS19_04020 PF03062 MBOAT, membrane-bound O-acyltransferase family AS19_04030 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AS19_04050 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AS19_04050 PF16824 C-terminal carbohydrate-binding module AS19_04090 PF00483 Nucleotidyl transferase AS19_04090 PF01050 Mannose-6-phosphate isomerase AS19_04100 PF00338 Ribosomal protein S10p/S20e AS19_04110 PF00297 Ribosomal protein L3 AS19_04120 PF00573 Ribosomal protein L4/L1 family AS19_04130 PF00276 Ribosomal protein L23 AS19_04140 PF03947 Ribosomal Proteins L2, C-terminal domain AS19_04140 PF00181 Ribosomal Proteins L2, RNA binding domain AS19_04150 PF00203 Ribosomal protein S19 AS19_04160 PF00237 Ribosomal protein L22p/L17e AS19_04170 PF07650 KH domain AS19_04170 PF00189 Ribosomal protein S3, C-terminal domain AS19_04180 PF00252 Ribosomal protein L16p/L10e AS19_04190 PF00831 Ribosomal L29 protein AS19_04200 PF00366 Ribosomal protein S17 AS19_04210 PF00238 Ribosomal protein L14p/L23e AS19_04220 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AS19_04230 PF00281 Ribosomal protein L5 AS19_04230 PF00673 ribosomal L5P family C-terminus AS19_04240 PF00253 Ribosomal protein S14p/S29e AS19_04250 PF00410 Ribosomal protein S8 AS19_04260 PF00347 Ribosomal protein L6 AS19_04270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AS19_04280 PF00333 Ribosomal protein S5, N-terminal domain AS19_04280 PF03719 Ribosomal protein S5, C-terminal domain AS19_04290 PF00327 Ribosomal protein L30p/L7e AS19_04300 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AS19_04310 PF00344 SecY translocase AS19_04320 PF00444 Ribosomal protein L36 AS19_04330 PF00416 Ribosomal protein S13/S18 AS19_04340 PF00411 Ribosomal protein S11 AS19_04350 PF00163 Ribosomal protein S4/S9 N-terminal domain AS19_04350 PF01479 S4 domain AS19_04360 PF01000 RNA polymerase Rpb3/RpoA insert domain AS19_04360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AS19_04360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AS19_04370 PF01196 Ribosomal protein L17 AS19_04420 PF17760 UvrA interaction domain AS19_04420 PF17755 UvrA DNA-binding domain AS19_04430 PF00196 Bacterial regulatory proteins, luxR family AS19_04440 PF07690 Major Facilitator Superfamily AS19_04450 PF00436 Single-strand binding protein family AS19_04470 PF11356 Type II secretion system protein C AS19_04480 PF00263 Bacterial type II and III secretion system protein AS19_04480 PF03958 Bacterial type II/III secretion system short domain AS19_04500 PF00211 Adenylate and Guanylate cyclase catalytic domain AS19_04500 PF00072 Response regulator receiver domain AS19_04510 PF00561 alpha/beta hydrolase fold AS19_04520 PF03814 Potassium-transporting ATPase A subunit AS19_04550 PF01434 Peptidase family M41 AS19_04550 PF00004 ATPase family associated with various cellular activities (AAA) AS19_04550 PF17862 AAA+ lid domain AS19_04570 PF17149 Periplasmic sensor domain found in signal transduction proteins AS19_04570 PF01627 Hpt domain AS19_04570 PF00072 Response regulator receiver domain AS19_04570 PF00512 His Kinase A (phospho-acceptor) domain AS19_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_04570 PF00672 HAMP domain AS19_04590 PF03109 ABC1 family AS19_04610 PF12833 Helix-turn-helix domain AS19_04610 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_04660 PF00348 Polyprenyl synthetase AS19_04670 PF00829 Ribosomal prokaryotic L21 protein AS19_04680 PF01016 Ribosomal L27 protein AS19_04690 PF01018 GTP1/OBG AS19_04690 PF01926 50S ribosome-binding GTPase AS19_04700 PF00696 Amino acid kinase family AS19_04700 PF01472 PUA domain AS19_04710 PF01649 Ribosomal protein S20 AS19_04720 PF03023 Lipid II flippase MurJ AS19_04730 PF01687 Riboflavin kinase AS19_04730 PF06574 FAD synthetase AS19_04740 PF08264 Anticodon-binding domain of tRNA AS19_04740 PF06827 Zinc finger found in FPG and IleRS AS19_04740 PF00133 tRNA synthetases class I (I, L, M and V) AS19_04750 PF01252 Signal peptidase (SPase) II AS19_04760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS19_04770 PF02401 LytB protein AS19_04780 PF07963 Prokaryotic N-terminal methylation motif AS19_04780 PF00114 Pilin (bacterial filament) AS19_04850 PF01266 FAD dependent oxidoreductase AS19_04860 PF00158 Sigma-54 interaction domain AS19_04860 PF00072 Response regulator receiver domain AS19_04860 PF02954 Bacterial regulatory protein, Fis family AS19_04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_04870 PF00512 His Kinase A (phospho-acceptor) domain AS19_04890 PF02540 NAD synthase AS19_04890 PF00795 Carbon-nitrogen hydrolase AS19_04900 PF13525 Outer membrane lipoprotein AS19_04910 PF01479 S4 domain AS19_04910 PF00849 RNA pseudouridylate synthase AS19_04930 PF07724 AAA domain (Cdc48 subfamily) AS19_04930 PF02861 Clp amino terminal domain, pathogenicity island component AS19_04930 PF17871 AAA lid domain AS19_04930 PF00004 ATPase family associated with various cellular activities (AAA) AS19_04930 PF10431 C-terminal, D2-small domain, of ClpB protein AS19_04950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS19_04950 PF00205 Thiamine pyrophosphate enzyme, central domain AS19_04950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS19_04960 PF10369 Small subunit of acetolactate synthase AS19_04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_04990 PF03466 LysR substrate binding domain AS19_05000 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AS19_05000 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS19_05010 PF01066 CDP-alcohol phosphatidyltransferase AS19_05030 PF00781 Diacylglycerol kinase catalytic domain AS19_05070 PF10458 Valyl tRNA synthetase tRNA binding arm AS19_05070 PF00133 tRNA synthetases class I (I, L, M and V) AS19_05070 PF08264 Anticodon-binding domain of tRNA AS19_05090 PF04364 DNA polymerase III chi subunit, HolC AS19_05100 PF02789 Cytosol aminopeptidase family, N-terminal domain AS19_05100 PF00883 Cytosol aminopeptidase family, catalytic domain AS19_05110 PF03739 Lipopolysaccharide export system permease LptF/LptG AS19_05120 PF03739 Lipopolysaccharide export system permease LptF/LptG AS19_05140 PF02547 Queuosine biosynthesis protein AS19_05150 PF01702 Queuine tRNA-ribosyltransferase AS19_05160 PF02699 Preprotein translocase subunit AS19_05170 PF13721 SecD export protein N-terminal TM region AS19_05170 PF07549 SecD/SecF GG Motif AS19_05170 PF02355 Protein export membrane protein AS19_05180 PF02355 Protein export membrane protein AS19_05180 PF07549 SecD/SecF GG Motif AS19_05200 PF00155 Aminotransferase class I and II AS19_05210 PF01425 Amidase AS19_05220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS19_05230 PF00202 Aminotransferase class-III AS19_05240 PF00180 Isocitrate/isopropylmalate dehydrogenase AS19_05250 PF00171 Aldehyde dehydrogenase family AS19_05260 PF00459 Inositol monophosphatase family AS19_05270 PF00588 SpoU rRNA Methylase family AS19_05280 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_05290 PF06071 Protein of unknown function (DUF933) AS19_05290 PF01926 50S ribosome-binding GTPase AS19_05300 PF01195 Peptidyl-tRNA hydrolase AS19_05310 PF01386 Ribosomal L25p family AS19_05310 PF14693 Ribosomal protein TL5, C-terminal domain AS19_05320 PF14572 Phosphoribosyl synthetase-associated domain AS19_05320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS19_05330 PF00288 GHMP kinases N terminal domain AS19_05330 PF08544 GHMP kinases C terminal AS19_05340 PF03550 Outer membrane lipoprotein LolB AS19_05370 PF01488 Shikimate / quinate 5-dehydrogenase AS19_05370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AS19_05370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AS19_05380 PF00472 RF-1 domain AS19_05380 PF03462 PCRF domain AS19_05390 PF13847 Methyltransferase domain AS19_05390 PF17827 PrmC N-terminal domain AS19_05400 PF00899 ThiF family AS19_05430 PF00378 Enoyl-CoA hydratase/isomerase AS19_05440 PF02934 GatB/GatE catalytic domain AS19_05440 PF02637 GatB domain AS19_05450 PF01425 Amidase AS19_05460 PF02686 Glu-tRNAGln amidotransferase C subunit AS19_05480 PF04085 rod shape-determining protein MreC AS19_05490 PF04093 rod shape-determining protein MreD AS19_05500 PF02545 Maf-like protein AS19_05520 PF00795 Carbon-nitrogen hydrolase AS19_05530 PF01523 Putative modulator of DNA gyrase AS19_05540 PF00005 ABC transporter AS19_05540 PF00027 Cyclic nucleotide-binding domain AS19_05560 PF04751 Protein of unknown function (DUF615) AS19_05570 PF01523 Putative modulator of DNA gyrase AS19_05580 PF00571 CBS domain AS19_05580 PF03448 MgtE intracellular N domain AS19_05580 PF01769 Divalent cation transporter AS19_05590 PF09312 SurA N-terminal domain AS19_05600 PF02665 Nitrate reductase gamma subunit AS19_05610 PF02613 Nitrate reductase delta subunit AS19_05620 PF14711 Respiratory nitrate reductase beta C-terminal AS19_05620 PF13247 4Fe-4S dicluster domain AS19_05630 PF14710 Respiratory nitrate reductase alpha N-terminal AS19_05630 PF00384 Molybdopterin oxidoreductase AS19_05630 PF01568 Molydopterin dinucleotide binding domain AS19_05640 PF07690 Major Facilitator Superfamily AS19_05650 PF00381 PTS HPr component phosphorylation site AS19_05660 PF03668 P-loop ATPase protein family AS19_05670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS19_05680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AS19_05690 PF04963 Sigma-54 factor, core binding domain AS19_05690 PF04552 Sigma-54, DNA binding domain AS19_05690 PF00309 Sigma-54 factor, Activator interacting domain (AID) AS19_05700 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS19_05700 PF00005 ABC transporter AS19_05740 PF00571 CBS domain AS19_05740 PF01380 SIS domain AS19_05770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS19_05780 PF01634 ATP phosphoribosyltransferase AS19_05790 PF00815 Histidinol dehydrogenase AS19_05800 PF00155 Aminotransferase class I and II AS19_05820 PF17820 PDZ domain AS19_05820 PF13180 PDZ domain AS19_05830 PF01784 NIF3 (NGG1p interacting factor 3) AS19_05840 PF00781 Diacylglycerol kinase catalytic domain AS19_05850 PF14306 PUA-like domain AS19_05850 PF01747 ATP-sulfurylase AS19_05870 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AS19_05880 PF03969 AFG1-like ATPase AS19_05890 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_05890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_05890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_05920 PF00248 Aldo/keto reductase family AS19_05930 PF00572 Ribosomal protein L13 AS19_05940 PF00380 Ribosomal protein S9/S16 AS19_05950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AS19_05950 PF00355 Rieske [2Fe-2S] domain AS19_05960 PF00032 Cytochrome b(C-terminal)/b6/petD AS19_05960 PF00033 Cytochrome b/b6/petB AS19_05970 PF02167 Cytochrome C1 family AS19_05980 PF02798 Glutathione S-transferase, N-terminal domain AS19_05980 PF00043 Glutathione S-transferase, C-terminal domain AS19_05990 PF04386 Stringent starvation protein B AS19_06000 PF04972 BON domain AS19_06010 PF13580 SIS domain AS19_06020 PF02021 Uncharacterised protein family UPF0102 AS19_06030 PF04348 LppC putative lipoprotein AS19_06040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS19_06050 PF00258 Flavodoxin AS19_06050 PF01613 Flavin reductase like domain AS19_06060 PF02381 MraZ protein, putative antitoxin-like AS19_06070 PF01795 MraW methylase family AS19_06090 PF03717 Penicillin-binding Protein dimerisation domain AS19_06090 PF00905 Penicillin binding protein transpeptidase domain AS19_06100 PF01225 Mur ligase family, catalytic domain AS19_06100 PF02875 Mur ligase family, glutamate ligase domain AS19_06100 PF08245 Mur ligase middle domain AS19_06110 PF08245 Mur ligase middle domain AS19_06110 PF01225 Mur ligase family, catalytic domain AS19_06110 PF02875 Mur ligase family, glutamate ligase domain AS19_06120 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AS19_06120 PF00953 Glycosyl transferase family 4 AS19_06130 PF02875 Mur ligase family, glutamate ligase domain AS19_06130 PF08245 Mur ligase middle domain AS19_06140 PF01098 Cell cycle protein AS19_06150 PF03033 Glycosyltransferase family 28 N-terminal domain AS19_06150 PF04101 Glycosyltransferase family 28 C-terminal domain AS19_06160 PF01225 Mur ligase family, catalytic domain AS19_06160 PF02875 Mur ligase family, glutamate ligase domain AS19_06160 PF08245 Mur ligase middle domain AS19_06170 PF07478 D-ala D-ala ligase C-terminus AS19_06170 PF01820 D-ala D-ala ligase N-terminus AS19_06180 PF08478 POTRA domain, FtsQ-type AS19_06180 PF03799 Cell division protein FtsQ AS19_06190 PF02491 SHS2 domain inserted in FTSA AS19_06200 PF00091 Tubulin/FtsZ family, GTPase domain AS19_06200 PF12327 FtsZ family, C-terminal domain AS19_06210 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AS19_06230 PF01476 LysM domain AS19_06230 PF01551 Peptidase family M23 AS19_06230 PF08525 Opacity-associated protein A N-terminal motif AS19_06240 PF07516 SecA Wing and Scaffold domain AS19_06240 PF01043 SecA preprotein cross-linking domain AS19_06240 PF02810 SEC-C motif AS19_06240 PF07517 SecA DEAD-like domain AS19_06250 PF01960 ArgJ family AS19_06260 PF00293 NUDIX domain AS19_06270 PF03884 DNA gyrase inhibitor YacG AS19_06280 PF01121 Dephospho-CoA kinase AS19_06290 PF01478 Type IV leader peptidase family AS19_06290 PF06750 Bacterial Peptidase A24 N-terminal domain AS19_06300 PF00482 Type II secretion system (T2SS), protein F AS19_06310 PF00437 Type II/IV secretion system protein AS19_06310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AS19_06320 PF07963 Prokaryotic N-terminal methylation motif AS19_06320 PF00114 Pilin (bacterial filament) AS19_06340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AS19_06340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AS19_06350 PF01235 Sodium:alanine symporter family AS19_06370 PF01510 N-acetylmuramoyl-L-alanine amidase AS19_06390 PF00456 Transketolase, thiamine diphosphate binding domain AS19_06390 PF17831 Pyruvate dehydrogenase E1 component middle domain AS19_06400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS19_06400 PF00364 Biotin-requiring enzyme AS19_06400 PF02817 e3 binding domain AS19_06420 PF00486 Transcriptional regulatory protein, C terminal AS19_06420 PF00072 Response regulator receiver domain AS19_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_06430 PF00512 His Kinase A (phospho-acceptor) domain AS19_06430 PF00672 HAMP domain AS19_06440 PF01923 Cobalamin adenosyltransferase AS19_06450 PF07715 TonB-dependent Receptor Plug Domain AS19_06450 PF00593 TonB dependent receptor AS19_06460 PF02558 Ketopantoate reductase PanE/ApbA AS19_06460 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS19_06480 PF07690 Major Facilitator Superfamily AS19_06490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS19_06510 PF00166 Chaperonin 10 Kd subunit AS19_06520 PF00118 TCP-1/cpn60 chaperonin family AS19_06550 PF08502 LeuA allosteric (dimerisation) domain AS19_06550 PF00682 HMGL-like AS19_06600 PF03144 Elongation factor Tu domain 2 AS19_06600 PF00009 Elongation factor Tu GTP binding domain AS19_06600 PF16658 Class II release factor RF3, C-terminal domain AS19_06610 PF04237 YjbR AS19_06640 PF00109 Beta-ketoacyl synthase, N-terminal domain AS19_06640 PF02801 Beta-ketoacyl synthase, C-terminal domain AS19_06650 PF02803 Thiolase, C-terminal domain AS19_06650 PF00108 Thiolase, N-terminal domain AS19_06660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS19_06660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS19_06710 PF10017 Histidine-specific methyltransferase, SAM-dependent AS19_06720 PF12867 DinB superfamily AS19_06720 PF03781 Sulfatase-modifying factor enzyme 1 AS19_06730 PF00106 short chain dehydrogenase AS19_06740 PF11892 Domain of unknown function (DUF3412) AS19_06740 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AS19_06740 PF03641 Possible lysine decarboxylase AS19_06760 PF11798 IMS family HHH motif AS19_06760 PF00817 impB/mucB/samB family AS19_06770 PF01494 FAD binding domain AS19_06780 PF13847 Methyltransferase domain AS19_06790 PF01638 HxlR-like helix-turn-helix AS19_06830 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_06830 PF12833 Helix-turn-helix domain AS19_06840 PF03176 MMPL family AS19_06860 PF12697 Alpha/beta hydrolase family AS19_06880 PF00970 Oxidoreductase FAD-binding domain AS19_06880 PF00175 Oxidoreductase NAD-binding domain AS19_06880 PF00111 2Fe-2S iron-sulfur cluster binding domain AS19_06890 PF00355 Rieske [2Fe-2S] domain AS19_06890 PF11723 Homotrimeric ring hydroxylase AS19_06900 PF11723 Homotrimeric ring hydroxylase AS19_06900 PF00355 Rieske [2Fe-2S] domain AS19_06930 PF18665 Tetracyclin repressor-like, C-terminal domain AS19_06930 PF00440 Bacterial regulatory proteins, tetR family AS19_06940 PF00296 Luciferase-like monooxygenase AS19_06960 PF01757 Acyltransferase family AS19_06990 PF00311 Phosphoenolpyruvate carboxylase AS19_07030 PF09285 Elongation factor P, C-terminal AS19_07030 PF08207 Elongation factor P (EF-P) KOW-like domain AS19_07030 PF01132 Elongation factor P (EF-P) OB domain AS19_07050 PF01694 Rhomboid family AS19_07050 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AS19_07090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AS19_07130 PF00330 Aconitase family (aconitate hydratase) AS19_07130 PF00694 Aconitase C-terminal domain AS19_07140 PF01863 Protein of unknown function DUF45 AS19_07170 PF02254 TrkA-N domain AS19_07170 PF00999 Sodium/hydrogen exchanger family AS19_07170 PF02080 TrkA-C domain AS19_07230 PF00171 Aldehyde dehydrogenase family AS19_07240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS19_07240 PF00205 Thiamine pyrophosphate enzyme, central domain AS19_07240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS19_07250 PF07969 Amidohydrolase family AS19_07280 PF00578 AhpC/TSA family AS19_07280 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS19_07310 PF00268 Ribonucleotide reductase, small chain AS19_07320 PF02867 Ribonucleotide reductase, barrel domain AS19_07320 PF00317 Ribonucleotide reductase, all-alpha domain AS19_07320 PF03477 ATP cone domain AS19_07330 PF00072 Response regulator receiver domain AS19_07330 PF00486 Transcriptional regulatory protein, C terminal AS19_07340 PF00672 HAMP domain AS19_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_07340 PF00512 His Kinase A (phospho-acceptor) domain AS19_07350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS19_07350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS19_07360 PF00990 Diguanylate cyclase, GGDEF domain AS19_07360 PF03707 Bacterial signalling protein N terminal repeat AS19_07360 PF00563 EAL domain AS19_07370 PF00072 Response regulator receiver domain AS19_07370 PF00990 Diguanylate cyclase, GGDEF domain AS19_07380 PF00005 ABC transporter AS19_07380 PF08402 TOBE domain AS19_07390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS19_07390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS19_07400 PF00202 Aminotransferase class-III AS19_07410 PF02538 Hydantoinase B/oxoprolinase AS19_07430 PF00462 Glutaredoxin AS19_07440 PF00578 AhpC/TSA family AS19_07440 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS19_07450 PF00929 Exonuclease AS19_07460 PF00764 Arginosuccinate synthase AS19_07480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS19_07490 PF18030 RimK PreATP-grasp domain AS19_07490 PF08443 RimK-like ATP-grasp domain AS19_07500 PF08443 RimK-like ATP-grasp domain AS19_07500 PF18030 RimK PreATP-grasp domain AS19_07520 PF14306 PUA-like domain AS19_07520 PF01747 ATP-sulfurylase AS19_07570 PF00271 Helicase conserved C-terminal domain AS19_07570 PF00270 DEAD/DEAH box helicase AS19_07580 PF00570 HRDC domain AS19_07580 PF00271 Helicase conserved C-terminal domain AS19_07580 PF16124 RecQ zinc-binding AS19_07580 PF09382 RQC domain AS19_07580 PF00270 DEAD/DEAH box helicase AS19_07600 PF13614 AAA domain AS19_07620 PF04073 Aminoacyl-tRNA editing domain AS19_07620 PF03129 Anticodon binding domain AS19_07620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS19_07640 PF04357 TamB, inner membrane protein subunit of TAM complex AS19_07650 PF07244 Surface antigen variable number repeat AS19_07650 PF01103 Surface antigen AS19_07650 PF17243 POTRA domain TamA domain 1 AS19_07660 PF00072 Response regulator receiver domain AS19_07680 PF01209 ubiE/COQ5 methyltransferase family AS19_07720 PF00216 Bacterial DNA-binding protein AS19_07730 PF00152 tRNA synthetases class II (D, K and N) AS19_07730 PF01336 OB-fold nucleic acid binding domain AS19_07730 PF02938 GAD domain AS19_07750 PF01709 Transcriptional regulator AS19_07760 PF02075 Crossover junction endodeoxyribonuclease RuvC AS19_07770 PF07499 RuvA, C-terminal domain AS19_07770 PF01330 RuvA N terminal domain AS19_07780 PF05491 RuvB C-terminal winged helix domain AS19_07780 PF05496 Holliday junction DNA helicase RuvB P-loop domain AS19_07780 PF17864 RuvB AAA lid domain AS19_07790 PF03061 Thioesterase superfamily AS19_07800 PF01618 MotA/TolQ/ExbB proton channel family AS19_07810 PF02472 Biopolymer transport protein ExbD/TolR AS19_07830 PF04052 TolB amino-terminal domain AS19_07830 PF07676 WD40-like Beta Propeller Repeat AS19_07840 PF00691 OmpA family AS19_07860 PF04055 Radical SAM superfamily AS19_07870 PF06508 Queuosine biosynthesis protein QueC AS19_07890 PF01252 Signal peptidase (SPase) II AS19_07910 PF13411 MerR HTH family regulatory protein AS19_07930 PF00561 alpha/beta hydrolase fold AS19_07970 PF13495 Phage integrase, N-terminal SAM-like domain AS19_07970 PF00589 Phage integrase family AS19_07980 PF00873 AcrB/AcrD/AcrF family AS19_07990 PF09722 Protein of unknown function (DUF2384) AS19_07990 PF01936 NYN domain AS19_08000 PF00873 AcrB/AcrD/AcrF family AS19_08050 PF00158 Sigma-54 interaction domain AS19_08050 PF02954 Bacterial regulatory protein, Fis family AS19_08050 PF00072 Response regulator receiver domain AS19_08070 PF13276 HTH-like domain AS19_08070 PF13683 Integrase core domain AS19_08080 PF01527 Transposase AS19_08120 PF13411 MerR HTH family regulatory protein AS19_08130 PF03441 FAD binding domain of DNA photolyase AS19_08130 PF00875 DNA photolyase AS19_08140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AS19_08140 PF01266 FAD dependent oxidoreductase AS19_08170 PF02445 Quinolinate synthetase A protein AS19_08180 PF13181 Tetratricopeptide repeat AS19_08180 PF01435 Peptidase family M48 AS19_08190 PF01206 Sulfurtransferase TusA AS19_08200 PF01594 AI-2E family transporter AS19_08210 PF00578 AhpC/TSA family AS19_08220 PF01842 ACT domain AS19_08230 PF00701 Dihydrodipicolinate synthetase family AS19_08250 PF00753 Metallo-beta-lactamase superfamily AS19_08260 PF01259 SAICAR synthetase AS19_08310 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS19_08310 PF01464 Transglycosylase SLT domain AS19_08320 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AS19_08320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AS19_08320 PF02769 AIR synthase related protein, C-terminal domain AS19_08340 PF01784 NIF3 (NGG1p interacting factor 3) AS19_08350 PF09297 NADH pyrophosphatase zinc ribbon domain AS19_08350 PF00293 NUDIX domain AS19_08360 PF00196 Bacterial regulatory proteins, luxR family AS19_08380 PF00293 NUDIX domain AS19_08390 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_08410 PF01734 Patatin-like phospholipase AS19_08420 PF00571 CBS domain AS19_08420 PF03471 Transporter associated domain AS19_08420 PF01595 Cyclin M transmembrane N-terminal domain AS19_08440 PF00448 SRP54-type protein, GTPase domain AS19_08440 PF02881 SRP54-type protein, helical bundle domain AS19_08440 PF02978 Signal peptide binding domain AS19_08450 PF00886 Ribosomal protein S16 AS19_08460 PF01782 RimM N-terminal domain AS19_08460 PF05239 PRC-barrel domain AS19_08470 PF01746 tRNA (Guanine-1)-methyltransferase AS19_08480 PF01245 Ribosomal protein L19 AS19_08490 PF04226 Transglycosylase associated protein AS19_08500 PF02899 Phage integrase, N-terminal SAM-like domain AS19_08500 PF00589 Phage integrase family AS19_08510 PF10411 Disulfide bond isomerase protein N-terminus AS19_08510 PF13098 Thioredoxin-like domain AS19_08520 PF00155 Aminotransferase class I and II AS19_08530 PF01842 ACT domain AS19_08530 PF00742 Homoserine dehydrogenase AS19_08530 PF03447 Homoserine dehydrogenase, NAD binding domain AS19_08540 PF00291 Pyridoxal-phosphate dependent enzyme AS19_08550 PF02028 BCCT, betaine/carnitine/choline family transporter AS19_08600 PF02515 CoA-transferase family III AS19_08610 PF00588 SpoU rRNA Methylase family AS19_08610 PF12105 SpoU, rRNA methylase, C-terminal AS19_08640 PF13180 PDZ domain AS19_08640 PF00595 PDZ domain AS19_08660 PF02801 Beta-ketoacyl synthase, C-terminal domain AS19_08660 PF08990 Erythronolide synthase docking AS19_08660 PF08659 KR domain AS19_08660 PF00550 Phosphopantetheine attachment site AS19_08660 PF00698 Acyl transferase domain AS19_08660 PF14765 Polyketide synthase dehydratase AS19_08660 PF16197 Ketoacyl-synthetase C-terminal extension AS19_08660 PF00109 Beta-ketoacyl synthase, N-terminal domain AS19_08660 PF08240 Alcohol dehydrogenase GroES-like domain AS19_08690 PF02222 ATP-grasp domain AS19_08700 PF14437 MafB19-like deaminase AS19_08710 PF05736 OprF membrane domain AS19_08710 PF00691 OmpA family AS19_08720 PF00990 Diguanylate cyclase, GGDEF domain AS19_08720 PF00563 EAL domain AS19_08790 PF00512 His Kinase A (phospho-acceptor) domain AS19_08790 PF00672 HAMP domain AS19_08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_08810 PF00486 Transcriptional regulatory protein, C terminal AS19_08810 PF00072 Response regulator receiver domain AS19_08820 PF12833 Helix-turn-helix domain AS19_08820 PF01965 DJ-1/PfpI family AS19_08830 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_08830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_08830 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS19_08830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_08840 PF00109 Beta-ketoacyl synthase, N-terminal domain AS19_08840 PF02801 Beta-ketoacyl synthase, C-terminal domain AS19_08850 PF07977 FabA-like domain AS19_08860 PF01578 Cytochrome C assembly protein AS19_08860 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AS19_08870 PF08534 Redoxin AS19_08880 PF03918 Cytochrome C biogenesis protein AS19_08900 PF05191 Adenylate kinase, active site lid AS19_08930 PF00210 Ferritin-like domain AS19_08950 PF00364 Biotin-requiring enzyme AS19_08950 PF00682 HMGL-like AS19_08950 PF02436 Conserved carboxylase domain AS19_08960 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AS19_09010 PF06779 Uncharacterised MFS-type transporter YbfB AS19_09020 PF00005 ABC transporter AS19_09030 PF00528 Binding-protein-dependent transport system inner membrane component AS19_09040 PF00005 ABC transporter AS19_09060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS19_09060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS19_09060 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_09060 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS19_09060 PF04324 BFD-like [2Fe-2S] binding domain AS19_09100 PF08376 Nitrate and nitrite sensing AS19_09100 PF03861 ANTAR domain AS19_09110 PF00005 ABC transporter AS19_09120 PF01717 Cobalamin-independent synthase, Catalytic domain AS19_09120 PF08267 Cobalamin-independent synthase, N-terminal domain AS19_09130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_09130 PF03466 LysR substrate binding domain AS19_09140 PF07308 Protein of unknown function (DUF1456) AS19_09200 PF00005 ABC transporter AS19_09210 PF03379 CcmB protein AS19_09220 PF01578 Cytochrome C assembly protein AS19_09230 PF04995 Heme exporter protein D (CcmD) AS19_09240 PF03100 CcmE AS19_09250 PF08443 RimK-like ATP-grasp domain AS19_09250 PF18030 RimK PreATP-grasp domain AS19_09260 PF02798 Glutathione S-transferase, N-terminal domain AS19_09280 PF00005 ABC transporter AS19_09290 PF01061 ABC-2 type transporter AS19_09300 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AS19_09300 PF14489 QueF-like protein AS19_09310 PF03806 AbgT putative transporter family AS19_09450 PF00881 Nitroreductase family AS19_09460 PF00211 Adenylate and Guanylate cyclase catalytic domain AS19_09470 PF00732 GMC oxidoreductase AS19_09470 PF05199 GMC oxidoreductase AS19_09560 PF17101 Stealth protein CR1, conserved region 1 AS19_09560 PF11380 Stealth protein CR2, conserved region 2 AS19_09560 PF17102 Stealth protein CR3, conserved region 3 AS19_09560 PF17103 Stealth protein CR4, conserved region 4 AS19_09560 PF00534 Glycosyl transferases group 1 AS19_09580 PF01835 MG2 domain AS19_09580 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AS19_09580 PF00207 Alpha-2-macroglobulin family AS19_09580 PF07703 Alpha-2-macroglobulin bait region domain AS19_09600 PF00905 Penicillin binding protein transpeptidase domain AS19_09600 PF06832 Penicillin-Binding Protein C-terminus Family AS19_09600 PF00912 Transglycosylase AS19_09610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS19_09610 PF01568 Molydopterin dinucleotide binding domain AS19_09610 PF00384 Molybdopterin oxidoreductase AS19_09640 PF14052 Capsule assembly protein Wzi AS19_09650 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AS19_09650 PF10531 SLBB domain AS19_09650 PF02563 Polysaccharide biosynthesis/export protein AS19_09660 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS19_09670 PF02706 Chain length determinant protein AS19_09670 PF13614 AAA domain AS19_09670 PF13807 G-rich domain on putative tyrosine kinase AS19_09680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS19_09680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS19_09680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS19_09690 PF01370 NAD dependent epimerase/dehydratase family AS19_09700 PF16363 GDP-mannose 4,6 dehydratase AS19_09710 PF04321 RmlD substrate binding domain AS19_09720 PF00483 Nucleotidyl transferase AS19_09730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AS19_09740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS19_09780 PF13439 Glycosyltransferase Family 4 AS19_09780 PF00534 Glycosyl transferases group 1 AS19_09800 PF00534 Glycosyl transferases group 1 AS19_09800 PF00862 Sucrose synthase AS19_09820 PF13439 Glycosyltransferase Family 4 AS19_09820 PF00534 Glycosyl transferases group 1 AS19_09840 PF00534 Glycosyl transferases group 1 AS19_09840 PF13477 Glycosyl transferase 4-like AS19_09850 PF02397 Bacterial sugar transferase AS19_09880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS19_09900 PF02719 Polysaccharide biosynthesis protein AS19_09910 PF03600 Citrate transporter AS19_09910 PF02080 TrkA-C domain AS19_09930 PF10996 Beta-Casp domain AS19_09930 PF00753 Metallo-beta-lactamase superfamily AS19_09930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AS19_09940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS19_09940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS19_09940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS19_09960 PF00483 Nucleotidyl transferase AS19_09970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS19_09970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS19_09970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS19_09980 PF00342 Phosphoglucose isomerase AS19_09990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS19_09990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS19_09990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS19_09990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS19_10000 PF16363 GDP-mannose 4,6 dehydratase AS19_10030 PF00535 Glycosyl transferase family 2 AS19_10050 PF02397 Bacterial sugar transferase AS19_10060 PF00155 Aminotransferase class I and II AS19_10070 PF04851 Type III restriction enzyme, res subunit AS19_10070 PF17757 UvrB interaction domain AS19_10070 PF00271 Helicase conserved C-terminal domain AS19_10070 PF02151 UvrB/uvrC motif AS19_10070 PF12344 Ultra-violet resistance protein B AS19_10090 PF02463 RecF/RecN/SMC N terminal domain AS19_10100 PF04354 ZipA, C-terminal FtsZ-binding domain AS19_10110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AS19_10110 PF03120 NAD-dependent DNA ligase OB-fold domain AS19_10110 PF01653 NAD-dependent DNA ligase adenylation domain AS19_10110 PF00533 BRCA1 C Terminus (BRCT) domain AS19_10110 PF12826 Helix-hairpin-helix motif AS19_10150 PF00793 DAHP synthetase I family AS19_10160 PF00106 short chain dehydrogenase AS19_10170 PF01575 MaoC like domain AS19_10190 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_10190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_10190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_10240 PF00171 Aldehyde dehydrogenase family AS19_10250 PF02321 Outer membrane efflux protein AS19_10260 PF00873 AcrB/AcrD/AcrF family AS19_10270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS19_10270 PF00529 HlyD membrane-fusion protein of T1SS AS19_10280 PF00440 Bacterial regulatory proteins, tetR family AS19_10280 PF08361 MAATS-type transcriptional repressor, C-terminal region AS19_10290 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS19_10290 PF02558 Ketopantoate reductase PanE/ApbA AS19_10310 PF01124 MAPEG family AS19_10320 PF01266 FAD dependent oxidoreductase AS19_10320 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AS19_10340 PF00672 HAMP domain AS19_10340 PF00512 His Kinase A (phospho-acceptor) domain AS19_10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_10340 PF00072 Response regulator receiver domain AS19_10340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS19_10340 PF01627 Hpt domain AS19_10360 PF13649 Methyltransferase domain AS19_10370 PF08003 Protein of unknown function (DUF1698) AS19_10430 PF00107 Zinc-binding dehydrogenase AS19_10430 PF00550 Phosphopantetheine attachment site AS19_10430 PF08240 Alcohol dehydrogenase GroES-like domain AS19_10430 PF08659 KR domain AS19_10430 PF02801 Beta-ketoacyl synthase, C-terminal domain AS19_10430 PF00109 Beta-ketoacyl synthase, N-terminal domain AS19_10430 PF16197 Ketoacyl-synthetase C-terminal extension AS19_10430 PF14765 Polyketide synthase dehydratase AS19_10430 PF00698 Acyl transferase domain AS19_10460 PF00108 Thiolase, N-terminal domain AS19_10460 PF02803 Thiolase, C-terminal domain AS19_10470 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_10470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_10470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_10480 PF00501 AMP-binding enzyme AS19_10480 PF13193 AMP-binding enzyme C-terminal domain AS19_10490 PF02785 Biotin carboxylase C-terminal domain AS19_10490 PF00289 Biotin carboxylase, N-terminal domain AS19_10490 PF00364 Biotin-requiring enzyme AS19_10490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS19_10500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS19_10500 PF00378 Enoyl-CoA hydratase/isomerase AS19_10500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS19_10510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_10510 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_10510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_10520 PF01039 Carboxyl transferase domain AS19_10550 PF17932 Tetracyclin repressor-like, C-terminal domain AS19_10550 PF00440 Bacterial regulatory proteins, tetR family AS19_10590 PF07885 Ion channel AS19_10590 PF00027 Cyclic nucleotide-binding domain AS19_10600 PF01513 ATP-NAD kinase AS19_10620 PF12262 Bacterial virulence factor lipase N-terminal AS19_10630 PF01433 Peptidase family M1 domain AS19_10630 PF11940 Domain of unknown function (DUF3458) Ig-like fold AS19_10630 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AS19_10650 PF07044 Protein of unknown function (DUF1329) AS19_10680 PF01180 Dihydroorotate dehydrogenase AS19_10690 PF04957 Ribosome modulation factor AS19_10700 PF01170 Putative RNA methylase family UPF0020 AS19_10700 PF10672 S-adenosylmethionine-dependent methyltransferase AS19_10720 PF01026 TatD related DNase AS19_10740 PF01726 LexA DNA binding domain AS19_10740 PF00717 Peptidase S24-like AS19_10760 PF00582 Universal stress protein family AS19_10770 PF01131 DNA topoisomerase AS19_10770 PF01751 Toprim domain AS19_10770 PF01396 Topoisomerase DNA binding C4 zinc finger AS19_10770 PF08272 Topoisomerase I zinc-ribbon-like AS19_10820 PF03734 L,D-transpeptidase catalytic domain AS19_10820 PF17969 L,D-transpeptidase C-terminal domain AS19_10830 PF00933 Glycosyl hydrolase family 3 N terminal domain AS19_10840 PF00924 Mechanosensitive ion channel AS19_10850 PF01171 PP-loop family AS19_10850 PF00156 Phosphoribosyl transferase domain AS19_10850 PF11734 TilS substrate C-terminal domain AS19_10860 PF01048 Phosphorylase superfamily AS19_10870 PF01595 Cyclin M transmembrane N-terminal domain AS19_10870 PF00571 CBS domain AS19_10880 PF00291 Pyridoxal-phosphate dependent enzyme AS19_10910 PF00106 short chain dehydrogenase AS19_10930 PF02559 CarD-like/TRCF domain AS19_10930 PF00270 DEAD/DEAH box helicase AS19_10930 PF17757 UvrB interaction domain AS19_10930 PF03461 TRCF domain AS19_10930 PF00271 Helicase conserved C-terminal domain AS19_10950 PF03167 Uracil DNA glycosylase superfamily AS19_10970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS19_10970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS19_10980 PF11973 NQRA C-terminal domain AS19_10980 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AS19_10990 PF03116 NQR2, RnfD, RnfE family AS19_11000 PF04205 FMN-binding domain AS19_11010 PF02508 Rnf-Nqr subunit, membrane protein AS19_11020 PF02508 Rnf-Nqr subunit, membrane protein AS19_11030 PF00970 Oxidoreductase FAD-binding domain AS19_11030 PF00111 2Fe-2S iron-sulfur cluster binding domain AS19_11030 PF00175 Oxidoreductase NAD-binding domain AS19_11040 PF02424 ApbE family AS19_11080 PF03009 Glycerophosphoryl diester phosphodiesterase family AS19_11100 PF13579 Glycosyl transferase 4-like domain AS19_11100 PF00534 Glycosyl transferases group 1 AS19_11120 PF00795 Carbon-nitrogen hydrolase AS19_11130 PF04371 Porphyromonas-type peptidyl-arginine deiminase AS19_11150 PF02687 FtsX-like permease family AS19_11150 PF12704 MacB-like periplasmic core domain AS19_11160 PF00005 ABC transporter AS19_11180 PF00753 Metallo-beta-lactamase superfamily AS19_11180 PF03772 Competence protein AS19_11190 PF01618 MotA/TolQ/ExbB proton channel family AS19_11200 PF02472 Biopolymer transport protein ExbD/TolR AS19_11210 PF00005 ABC transporter AS19_11210 PF00664 ABC transporter transmembrane region AS19_11220 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AS19_11230 PF02348 Cytidylyltransferase AS19_11240 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS19_11250 PF01565 FAD binding domain AS19_11250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS19_11260 PF00575 S1 RNA binding domain AS19_11260 PF12111 Polyribonucleotide phosphorylase C terminal AS19_11260 PF10150 Ribonuclease E/G family AS19_11270 PF00849 RNA pseudouridylate synthase AS19_11270 PF01479 S4 domain AS19_11280 PF13419 Haloacid dehalogenase-like hydrolase AS19_11290 PF01343 Peptidase family S49 AS19_11290 PF06965 Na+/H+ antiporter 1 AS19_11300 PF02545 Maf-like protein AS19_11310 PF02620 Large ribosomal RNA subunit accumulation protein YceD AS19_11320 PF01783 Ribosomal L32p protein family AS19_11330 PF02504 Fatty acid synthesis protein AS19_11340 PF00698 Acyl transferase domain AS19_11360 PF00550 Phosphopantetheine attachment site AS19_11370 PF00109 Beta-ketoacyl synthase, N-terminal domain AS19_11370 PF02801 Beta-ketoacyl synthase, C-terminal domain AS19_11390 PF02618 YceG-like family AS19_11400 PF02223 Thymidylate kinase AS19_11410 PF09115 DNA polymerase III, delta subunit, C terminal AS19_11430 PF01026 TatD related DNase AS19_11440 PF02646 RmuC family AS19_11470 PF00266 Aminotransferase class-V AS19_11480 PF00440 Bacterial regulatory proteins, tetR family AS19_11500 PF03793 PASTA domain AS19_11500 PF00069 Protein kinase domain AS19_11510 PF07690 Major Facilitator Superfamily AS19_11520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS19_11520 PF04324 BFD-like [2Fe-2S] binding domain AS19_11520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS19_11520 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS19_11520 PF13806 Rieske-like [2Fe-2S] domain AS19_11520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_11530 PF04324 BFD-like [2Fe-2S] binding domain AS19_11530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS19_11530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS19_11530 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_11530 PF13806 Rieske-like [2Fe-2S] domain AS19_11530 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS19_11540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS19_11540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS19_11540 PF04324 BFD-like [2Fe-2S] binding domain AS19_11540 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS19_11540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_11550 PF01568 Molydopterin dinucleotide binding domain AS19_11550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS19_11550 PF00384 Molybdopterin oxidoreductase AS19_11550 PF04324 BFD-like [2Fe-2S] binding domain AS19_11570 PF00027 Cyclic nucleotide-binding domain AS19_11570 PF00520 Ion transport protein AS19_11580 PF00793 DAHP synthetase I family AS19_11590 PF02146 Sir2 family AS19_11610 PF00795 Carbon-nitrogen hydrolase AS19_11610 PF00583 Acetyltransferase (GNAT) family AS19_11630 PF00743 Flavin-binding monooxygenase-like AS19_11640 PF01479 S4 domain AS19_11640 PF00849 RNA pseudouridylate synthase AS19_11650 PF03466 LysR substrate binding domain AS19_11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_11680 PF01012 Electron transfer flavoprotein domain AS19_11690 PF00766 Electron transfer flavoprotein FAD-binding domain AS19_11690 PF01012 Electron transfer flavoprotein domain AS19_11700 PF00106 short chain dehydrogenase AS19_11730 PF14403 Circularly permuted ATP-grasp type 2 AS19_11740 PF14403 Circularly permuted ATP-grasp type 2 AS19_11740 PF04168 A predicted alpha-helical domain with a conserved ER motif. AS19_11750 PF01841 Transglutaminase-like superfamily AS19_11750 PF08379 Bacterial transglutaminase-like N-terminal region AS19_11770 PF00884 Sulfatase AS19_11850 PF03776 Septum formation topological specificity factor MinE AS19_11860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS19_11870 PF03775 Septum formation inhibitor MinC, C-terminal domain AS19_11870 PF05209 Septum formation inhibitor MinC, N-terminal domain AS19_11880 PF09317 Domain of unknown function (DUF1974) AS19_11880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_11880 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_11880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_11890 PF00085 Thioredoxin AS19_11900 PF00543 Nitrogen regulatory protein P-II AS19_11910 PF00909 Ammonium Transporter Family AS19_11930 PF12804 MobA-like NTP transferase domain AS19_11940 PF06733 DEAD_2 AS19_11940 PF13307 Helicase C-terminal domain AS19_11950 PF00814 Glycoprotease family AS19_11970 PF02673 Bacitracin resistance protein BacA AS19_11980 PF04445 Putative SAM-dependent methyltransferase AS19_11990 PF01553 Acyltransferase AS19_12020 PF00171 Aldehyde dehydrogenase family AS19_12040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS19_12040 PF00529 HlyD membrane-fusion protein of T1SS AS19_12060 PF07687 Peptidase dimerisation domain AS19_12060 PF01546 Peptidase family M20/M25/M40 AS19_12070 PF14602 Hexapeptide repeat of succinyl-transferase AS19_12070 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AS19_12080 PF03960 ArsC family AS19_12090 PF00155 Aminotransferase class I and II AS19_12100 PF01909 Nucleotidyltransferase domain AS19_12100 PF01842 ACT domain AS19_12100 PF01966 HD domain AS19_12100 PF08335 GlnD PII-uridylyltransferase AS19_12110 PF00557 Metallopeptidase family M24 AS19_12120 PF00318 Ribosomal protein S2 AS19_12130 PF00889 Elongation factor TS AS19_12140 PF00696 Amino acid kinase family AS19_12150 PF01765 Ribosome recycling factor AS19_12160 PF01255 Putative undecaprenyl diphosphate synthase AS19_12180 PF13288 DXP reductoisomerase C-terminal domain AS19_12180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AS19_12180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AS19_12190 PF13180 PDZ domain AS19_12190 PF02163 Peptidase family M50 AS19_12190 PF17820 PDZ domain AS19_12200 PF07244 Surface antigen variable number repeat AS19_12200 PF01103 Surface antigen AS19_12220 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AS19_12220 PF14602 Hexapeptide repeat of succinyl-transferase AS19_12220 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_12230 PF07977 FabA-like domain AS19_12240 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_12240 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AS19_12250 PF02684 Lipid-A-disaccharide synthetase AS19_12260 PF01351 Ribonuclease HII AS19_12270 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS19_12270 PF01336 OB-fold nucleic acid binding domain AS19_12270 PF02811 PHP domain AS19_12270 PF14579 Helix-hairpin-helix motif AS19_12270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS19_12280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AS19_12290 PF11734 TilS substrate C-terminal domain AS19_12290 PF09179 TilS substrate binding domain AS19_12290 PF01171 PP-loop family AS19_12300 PF16124 RecQ zinc-binding AS19_12300 PF00271 Helicase conserved C-terminal domain AS19_12300 PF00570 HRDC domain AS19_12300 PF00270 DEAD/DEAH box helicase AS19_12300 PF09382 RQC domain AS19_12310 PF00117 Glutamine amidotransferase class-I AS19_12310 PF06418 CTP synthase N-terminus AS19_12320 PF00793 DAHP synthetase I family AS19_12330 PF00113 Enolase, C-terminal TIM barrel domain AS19_12330 PF03952 Enolase, N-terminal domain AS19_12340 PF04977 Septum formation initiator AS19_12350 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AS19_12360 PF02542 YgbB family AS19_12370 PF01142 tRNA pseudouridine synthase D (TruD) AS19_12400 PF01476 LysM domain AS19_12400 PF01551 Peptidase family M23 AS19_12410 PF01545 Cation efflux family AS19_12410 PF16916 Dimerisation domain of Zinc Transporter AS19_12430 PF05199 GMC oxidoreductase AS19_12430 PF00732 GMC oxidoreductase AS19_12440 PF00465 Iron-containing alcohol dehydrogenase AS19_12450 PF03061 Thioesterase superfamily AS19_12460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS19_12460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS19_12490 PF01435 Peptidase family M48 AS19_12500 PF17785 PUA-like domain AS19_12500 PF10672 S-adenosylmethionine-dependent methyltransferase AS19_12520 PF00155 Aminotransferase class I and II AS19_12550 PF03239 Iron permease FTR1 family AS19_12560 PF01544 CorA-like Mg2+ transporter protein AS19_12580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS19_12580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS19_12600 PF01106 NifU-like domain AS19_12600 PF01521 Iron-sulphur cluster biosynthesis AS19_12610 PF01435 Peptidase family M48 AS19_12620 PF03109 ABC1 family AS19_12640 PF00849 RNA pseudouridylate synthase AS19_12650 PF05362 Lon protease (S16) C-terminal proteolytic domain AS19_12650 PF00004 ATPase family associated with various cellular activities (AAA) AS19_12650 PF02190 ATP-dependent protease La (LON) substrate-binding domain AS19_12670 PF00364 Biotin-requiring enzyme AS19_12670 PF00561 alpha/beta hydrolase fold AS19_12710 PF01161 Phosphatidylethanolamine-binding protein AS19_12730 PF00330 Aconitase family (aconitate hydratase) AS19_12730 PF06434 Aconitate hydratase 2 N-terminus AS19_12730 PF11791 Aconitate B N-terminal domain AS19_12750 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AS19_12760 PF00149 Calcineurin-like phosphoesterase AS19_12770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS19_12780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS19_12790 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AS19_12790 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS19_12800 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AS19_12800 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AS19_12810 PF05697 Bacterial trigger factor protein (TF) AS19_12810 PF05698 Bacterial trigger factor protein (TF) C-terminus AS19_12810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS19_12820 PF00574 Clp protease AS19_12830 PF10431 C-terminal, D2-small domain, of ClpB protein AS19_12830 PF06689 ClpX C4-type zinc finger AS19_12830 PF07724 AAA domain (Cdc48 subfamily) AS19_12840 PF00004 ATPase family associated with various cellular activities (AAA) AS19_12840 PF02190 ATP-dependent protease La (LON) substrate-binding domain AS19_12840 PF05362 Lon protease (S16) C-terminal proteolytic domain AS19_12850 PF00216 Bacterial DNA-binding protein AS19_12860 PF13145 PPIC-type PPIASE domain AS19_12880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS19_12880 PF00005 ABC transporter AS19_12890 PF00528 Binding-protein-dependent transport system inner membrane component AS19_12890 PF12911 N-terminal TM domain of oligopeptide transport permease C AS19_12900 PF00528 Binding-protein-dependent transport system inner membrane component AS19_12910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS19_12920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS19_12930 PF01464 Transglycosylase SLT domain AS19_12930 PF01476 LysM domain AS19_12940 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS19_12940 PF00753 Metallo-beta-lactamase superfamily AS19_12960 PF00075 RNase H AS19_12970 PF00929 Exonuclease AS19_12980 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AS19_13000 PF09297 NADH pyrophosphatase zinc ribbon domain AS19_13000 PF00293 NUDIX domain AS19_13000 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AS19_13020 PF01343 Peptidase family S49 AS19_13020 PF08496 Peptidase family S49 N-terminal AS19_13030 PF00107 Zinc-binding dehydrogenase AS19_13030 PF08240 Alcohol dehydrogenase GroES-like domain AS19_13040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS19_13040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS19_13050 PF01261 Xylose isomerase-like TIM barrel AS19_13060 PF00226 DnaJ domain AS19_13060 PF05099 Tellurite resistance protein TerB AS19_13080 PF00501 AMP-binding enzyme AS19_13080 PF13193 AMP-binding enzyme C-terminal domain AS19_13090 PF02785 Biotin carboxylase C-terminal domain AS19_13090 PF00289 Biotin carboxylase, N-terminal domain AS19_13090 PF00364 Biotin-requiring enzyme AS19_13090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS19_13100 PF00378 Enoyl-CoA hydratase/isomerase AS19_13110 PF01039 Carboxyl transferase domain AS19_13120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_13120 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_13120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_13130 PF00376 MerR family regulatory protein AS19_13130 PF09278 MerR, DNA binding AS19_13150 PF00072 Response regulator receiver domain AS19_13150 PF01627 Hpt domain AS19_13150 PF00512 His Kinase A (phospho-acceptor) domain AS19_13150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS19_13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_13150 PF00672 HAMP domain AS19_13160 PF13460 NAD(P)H-binding AS19_13170 PF03737 Aldolase/RraA AS19_13200 PF00056 lactate/malate dehydrogenase, NAD binding domain AS19_13200 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS19_13210 PF01494 FAD binding domain AS19_13220 PF12833 Helix-turn-helix domain AS19_13220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_13230 PF00135 Carboxylesterase family AS19_13240 PF01722 BolA-like protein AS19_13270 PF00528 Binding-protein-dependent transport system inner membrane component AS19_13280 PF03459 TOBE domain AS19_13280 PF00005 ABC transporter AS19_13310 PF05199 GMC oxidoreductase AS19_13310 PF00732 GMC oxidoreductase AS19_13340 PF05230 MASE2 domain AS19_13340 PF00990 Diguanylate cyclase, GGDEF domain AS19_13350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_13350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_13350 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_13360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_13360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_13360 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_13370 PF00106 short chain dehydrogenase AS19_13380 PF01171 PP-loop family AS19_13390 PF01274 Malate synthase AS19_13410 PF02390 Putative methyltransferase AS19_13440 PF08007 Cupin superfamily protein AS19_13450 PF00206 Lyase AS19_13450 PF08328 Adenylosuccinate lyase C-terminal AS19_13460 PF04356 Protein of unknown function (DUF489) AS19_13480 PF00293 NUDIX domain AS19_13490 PF01967 MoaC family AS19_13500 PF02597 ThiS family AS19_13510 PF02391 MoaE protein AS19_13520 PF00849 RNA pseudouridylate synthase AS19_13530 PF03971 Monomeric isocitrate dehydrogenase AS19_13540 PF00180 Isocitrate/isopropylmalate dehydrogenase AS19_13550 PF00313 'Cold-shock' DNA-binding domain AS19_13560 PF02617 ATP-dependent Clp protease adaptor protein ClpS AS19_13570 PF17871 AAA lid domain AS19_13570 PF10431 C-terminal, D2-small domain, of ClpB protein AS19_13570 PF07724 AAA domain (Cdc48 subfamily) AS19_13570 PF02861 Clp amino terminal domain, pathogenicity island component AS19_13570 PF00004 ATPase family associated with various cellular activities (AAA) AS19_13580 PF01176 Translation initiation factor 1A / IF-1 AS19_13590 PF04376 Arginine-tRNA-protein transferase, N terminus AS19_13590 PF04377 Arginine-tRNA-protein transferase, C terminus AS19_13600 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AS19_13610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_13620 PF09397 Ftsk gamma domain AS19_13620 PF17854 FtsK alpha domain AS19_13620 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AS19_13620 PF01580 FtsK/SpoIIIE family AS19_13630 PF03548 Outer membrane lipoprotein carrier protein LolA AS19_13640 PF12002 MgsA AAA+ ATPase C terminal AS19_13640 PF16193 AAA C-terminal domain AS19_13640 PF00004 ATPase family associated with various cellular activities (AAA) AS19_13650 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AS19_13660 PF02403 Seryl-tRNA synthetase N-terminal domain AS19_13660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS19_13670 PF14824 Sirohaem biosynthesis protein central AS19_13670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS19_13670 PF10414 Sirohaem synthase dimerisation region AS19_13680 PF00591 Glycosyl transferase family, a/b domain AS19_13680 PF02885 Glycosyl transferase family, helical bundle domain AS19_13710 PF02635 DsrE/DsrF-like family AS19_13720 PF01027 Inhibitor of apoptosis-promoting Bax1 AS19_13730 PF02374 Anion-transporting ATPase AS19_13750 PF13722 5TM C-terminal transporter carbon starvation CstA AS19_13750 PF02554 Carbon starvation protein CstA AS19_13760 PF00196 Bacterial regulatory proteins, luxR family AS19_13760 PF00072 Response regulator receiver domain AS19_13770 PF08459 UvrC Helix-hairpin-helix N-terminal AS19_13770 PF01541 GIY-YIG catalytic domain AS19_13770 PF12826 Helix-hairpin-helix motif AS19_13770 PF02151 UvrB/uvrC motif AS19_13780 PF01066 CDP-alcohol phosphatidyltransferase AS19_13790 PF09308 LuxQ, periplasmic AS19_13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_13790 PF00512 His Kinase A (phospho-acceptor) domain AS19_13790 PF00072 Response regulator receiver domain AS19_13800 PF03705 CheR methyltransferase, all-alpha domain AS19_13800 PF01739 CheR methyltransferase, SAM binding domain AS19_13810 PF00072 Response regulator receiver domain AS19_13820 PF01339 CheB methylesterase AS19_13830 PF00072 Response regulator receiver domain AS19_13840 PF00437 Type II/IV secretion system protein AS19_13850 PF00482 Type II secretion system (T2SS), protein F AS19_13860 PF07963 Prokaryotic N-terminal methylation motif AS19_13860 PF08334 Type II secretion system (T2SS), protein G AS19_13870 PF07963 Prokaryotic N-terminal methylation motif AS19_13870 PF12019 Type II transport protein GspH AS19_13880 PF02501 Type II secretion system (T2SS), protein I AS19_13880 PF07963 Prokaryotic N-terminal methylation motif AS19_13890 PF07963 Prokaryotic N-terminal methylation motif AS19_13890 PF11612 Type II secretion system (T2SS), protein J AS19_13900 PF03934 Type II secretion system (T2SS), protein K AS19_13920 PF04612 Type II secretion system (T2SS), protein M AS19_13960 PF02607 B12 binding domain AS19_13960 PF02574 Homocysteine S-methyltransferase AS19_13960 PF02965 Vitamin B12 dependent methionine synthase, activation domain AS19_13960 PF02310 B12 binding domain AS19_13960 PF00809 Pterin binding enzyme AS19_13970 PF05552 Conserved TM helix AS19_13970 PF00924 Mechanosensitive ion channel AS19_13990 PF02233 NAD(P) transhydrogenase beta subunit AS19_14000 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AS19_14010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS19_14010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS19_14020 PF03109 ABC1 family AS19_14040 PF11818 C-terminal domain of tail specific protease (DUF3340) AS19_14040 PF00595 PDZ domain AS19_14040 PF03572 Peptidase family S41 AS19_14040 PF17804 Tail specific protease N-terminal domain AS19_14060 PF07670 Nucleoside recognition AS19_14080 PF01544 CorA-like Mg2+ transporter protein AS19_14110 PF03883 Peroxide stress protein YaaA AS19_14130 PF00582 Universal stress protein family AS19_14140 PF13545 Crp-like helix-turn-helix domain AS19_14140 PF00027 Cyclic nucleotide-binding domain AS19_14150 PF04055 Radical SAM superfamily AS19_14150 PF06969 HemN C-terminal domain AS19_14170 PF00403 Heavy-metal-associated domain AS19_14190 PF13746 4Fe-4S dicluster domain AS19_14190 PF12801 4Fe-4S binding domain AS19_14190 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AS19_14200 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AS19_14200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS19_14230 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS19_14240 PF02801 Beta-ketoacyl synthase, C-terminal domain AS19_14240 PF00698 Acyl transferase domain AS19_14240 PF00109 Beta-ketoacyl synthase, N-terminal domain AS19_14240 PF00107 Zinc-binding dehydrogenase AS19_14240 PF00550 Phosphopantetheine attachment site AS19_14240 PF16197 Ketoacyl-synthetase C-terminal extension AS19_14240 PF08659 KR domain AS19_14240 PF14765 Polyketide synthase dehydratase AS19_14240 PF08240 Alcohol dehydrogenase GroES-like domain AS19_14250 PF03466 LysR substrate binding domain AS19_14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_14260 PF12146 Serine aminopeptidase, S33 AS19_14280 PF00529 HlyD membrane-fusion protein of T1SS AS19_14280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS19_14290 PF00873 AcrB/AcrD/AcrF family AS19_14310 PF07724 AAA domain (Cdc48 subfamily) AS19_14310 PF00004 ATPase family associated with various cellular activities (AAA) AS19_14310 PF17871 AAA lid domain AS19_14310 PF02861 Clp amino terminal domain, pathogenicity island component AS19_14310 PF10431 C-terminal, D2-small domain, of ClpB protein AS19_14320 PF04452 RNA methyltransferase AS19_14330 PF00849 RNA pseudouridylate synthase AS19_14330 PF01479 S4 domain AS19_14340 PF04079 Segregation and condensation complex subunit ScpB AS19_14350 PF02616 Segregation and condensation protein ScpA AS19_14360 PF00579 tRNA synthetases class I (W and Y) AS19_14370 PF01300 Telomere recombination AS19_14380 PF02811 PHP domain AS19_14390 PF04279 Intracellular septation protein A AS19_14400 PF03795 YCII-related domain AS19_14430 PF01553 Acyltransferase AS19_14470 PF13472 GDSL-like Lipase/Acylhydrolase family AS19_14480 PF00005 ABC transporter AS19_14500 PF07690 Major Facilitator Superfamily AS19_14520 PF13411 MerR HTH family regulatory protein AS19_14540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS19_14540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS19_14550 PF01266 FAD dependent oxidoreductase AS19_14550 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AS19_14560 PF02913 FAD linked oxidases, C-terminal domain AS19_14560 PF01565 FAD binding domain AS19_14580 PF00691 OmpA family AS19_14580 PF13488 Glycine zipper AS19_14590 PF02805 Metal binding domain of Ada AS19_14590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS19_14590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS19_14590 PF12833 Helix-turn-helix domain AS19_14600 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AS19_14600 PF00730 HhH-GPD superfamily base excision DNA repair protein AS19_14610 PF07690 Major Facilitator Superfamily AS19_14660 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AS19_14690 PF06803 Protein of unknown function (DUF1232) AS19_14700 PF13614 AAA domain AS19_14710 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_14710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS19_14720 PF01645 Conserved region in glutamate synthase AS19_14730 PF01551 Peptidase family M23 AS19_14730 PF01464 Transglycosylase SLT domain AS19_14730 PF10145 Phage-related minor tail protein AS19_14750 PF02896 PEP-utilising enzyme, TIM barrel domain AS19_14750 PF00391 PEP-utilising enzyme, mobile domain AS19_14750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS19_14760 PF03618 Kinase/pyrophosphorylase AS19_14770 PF03972 MmgE/PrpD family AS19_14780 PF04303 PrpF protein AS19_14790 PF00330 Aconitase family (aconitate hydratase) AS19_14790 PF00694 Aconitase C-terminal domain AS19_14800 PF00285 Citrate synthase, C-terminal domain AS19_14820 PF07729 FCD domain AS19_14820 PF00392 Bacterial regulatory proteins, gntR family AS19_14830 PF04715 Anthranilate synthase component I, N terminal region AS19_14830 PF00425 chorismate binding enzyme AS19_14850 PF03466 LysR substrate binding domain AS19_14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_14920 PF01008 Initiation factor 2 subunit family AS19_14930 PF00596 Class II Aldolase and Adducin N-terminal domain AS19_14940 PF03079 ARD/ARD' family AS19_14960 PF05175 Methyltransferase small domain AS19_14970 PF00271 Helicase conserved C-terminal domain AS19_14970 PF04408 Helicase associated domain (HA2) AS19_14970 PF00270 DEAD/DEAH box helicase AS19_14970 PF08482 ATP-dependent helicase C-terminal AS19_14990 PF01841 Transglutaminase-like superfamily AS19_14990 PF11992 Domain of unknown function (DUF3488) AS19_14990 PF13559 Domain of unknown function (DUF4129) AS19_15010 PF07726 ATPase family associated with various cellular activities (AAA) AS19_15010 PF17863 AAA lid domain AS19_15020 PF01053 Cys/Met metabolism PLP-dependent enzyme AS19_15030 PF00156 Phosphoribosyl transferase domain AS19_15050 PF02674 Colicin V production protein AS19_15070 PF02875 Mur ligase family, glutamate ligase domain AS19_15070 PF08245 Mur ligase middle domain AS19_15080 PF01039 Carboxyl transferase domain AS19_15080 PF17848 Acetyl-coA carboxylase zinc finger domain AS19_15090 PF00290 Tryptophan synthase alpha chain AS19_15100 PF00291 Pyridoxal-phosphate dependent enzyme AS19_15110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AS19_15120 PF01416 tRNA pseudouridine synthase AS19_15140 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS19_15140 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS19_15150 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS19_15150 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS19_15160 PF00180 Isocitrate/isopropylmalate dehydrogenase AS19_15180 PF00694 Aconitase C-terminal domain AS19_15190 PF00330 Aconitase family (aconitate hydratase) AS19_15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_15210 PF12832 MFS_1 like family AS19_15220 PF01264 Chorismate synthase AS19_15230 PF05175 Methyltransferase small domain AS19_15250 PF00909 Ammonium Transporter Family AS19_15250 PF00672 HAMP domain AS19_15270 PF00375 Sodium:dicarboxylate symporter family AS19_15290 PF00106 short chain dehydrogenase AS19_15310 PF00486 Transcriptional regulatory protein, C terminal AS19_15310 PF00072 Response regulator receiver domain AS19_15340 PF12697 Alpha/beta hydrolase family AS19_15360 PF03372 Endonuclease/Exonuclease/phosphatase family AS19_15380 PF00300 Histidine phosphatase superfamily (branch 1) AS19_15390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AS19_15390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AS19_15400 PF00183 Hsp90 protein AS19_15430 PF02629 CoA binding domain AS19_15430 PF00549 CoA-ligase AS19_15440 PF08442 ATP-grasp domain AS19_15440 PF00549 CoA-ligase AS19_15450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS19_15450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_15460 PF02817 e3 binding domain AS19_15460 PF00364 Biotin-requiring enzyme AS19_15460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS19_15470 PF00676 Dehydrogenase E1 component AS19_15470 PF02779 Transketolase, pyrimidine binding domain AS19_15470 PF16078 2-oxoglutarate dehydrogenase N-terminus AS19_15470 PF16870 2-oxoglutarate dehydrogenase C-terminal AS19_15480 PF13085 2Fe-2S iron-sulfur cluster binding domain AS19_15490 PF00890 FAD binding domain AS19_15490 PF02910 Fumarate reductase flavoprotein C-term AS19_15500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS19_15510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS19_15520 PF00285 Citrate synthase, C-terminal domain AS19_15540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS19_15540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS19_15580 PF00593 TonB dependent receptor AS19_15580 PF07715 TonB-dependent Receptor Plug Domain AS19_15600 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS19_15620 PF00582 Universal stress protein family AS19_15630 PF01740 STAS domain AS19_15630 PF00916 Sulfate permease family AS19_15640 PF01207 Dihydrouridine synthase (Dus) AS19_15650 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS19_15670 PF04333 MlaA lipoprotein AS19_15690 PF05114 Protein of unknown function (DUF692) AS19_15710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS19_15710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS19_15720 PF00270 DEAD/DEAH box helicase AS19_15720 PF04408 Helicase associated domain (HA2) AS19_15720 PF00271 Helicase conserved C-terminal domain AS19_15720 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AS19_15720 PF11898 Domain of unknown function (DUF3418) AS19_15770 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS19_15770 PF01464 Transglycosylase SLT domain AS19_15790 PF05736 OprF membrane domain AS19_15790 PF00691 OmpA family AS19_15810 PF02515 CoA-transferase family III AS19_15820 PF01625 Peptide methionine sulfoxide reductase AS19_15830 PF01641 SelR domain AS19_15850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_15850 PF12833 Helix-turn-helix domain AS19_15930 PF00561 alpha/beta hydrolase fold AS19_15940 PF00708 Acylphosphatase AS19_15950 PF03631 Virulence factor BrkB AS19_15960 PF03960 ArsC family AS19_15970 PF03358 NADPH-dependent FMN reductase AS19_16030 PF07726 ATPase family associated with various cellular activities (AAA) AS19_16030 PF17863 AAA lid domain AS19_16040 PF01882 Protein of unknown function DUF58 AS19_16050 PF04315 Elongation factor P hydroxylase AS19_16060 PF01554 MatE AS19_16110 PF01206 Sulfurtransferase TusA AS19_16120 PF07690 Major Facilitator Superfamily AS19_16130 PF01728 FtsJ-like methyltransferase AS19_16130 PF18125 RlmM ferredoxin-like domain AS19_16140 PF01842 ACT domain AS19_16140 PF00551 Formyl transferase AS19_16150 PF12833 Helix-turn-helix domain AS19_16150 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_16170 PF00072 Response regulator receiver domain AS19_16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_16180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS19_16180 PF00378 Enoyl-CoA hydratase/isomerase AS19_16180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS19_16190 PF00108 Thiolase, N-terminal domain AS19_16190 PF02803 Thiolase, C-terminal domain AS19_16230 PF01713 Smr domain AS19_16240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS19_16240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_16250 PF00308 Bacterial dnaA protein AS19_16270 PF02769 AIR synthase related protein, C-terminal domain AS19_16270 PF00586 AIR synthase related protein, N-terminal domain AS19_16280 PF00551 Formyl transferase AS19_16310 PF00692 dUTPase AS19_16320 PF10609 NUBPL iron-transfer P-loop NTPase AS19_16360 PF13438 Domain of unknown function (DUF4113) AS19_16360 PF00817 impB/mucB/samB family AS19_16360 PF11799 impB/mucB/samB family C-terminal domain AS19_16370 PF00717 Peptidase S24-like AS19_16400 PF05175 Methyltransferase small domain AS19_16400 PF08468 Methyltransferase small domain N-terminal AS19_16410 PF01464 Transglycosylase SLT domain AS19_16410 PF14718 Soluble lytic murein transglycosylase L domain AS19_16460 PF00440 Bacterial regulatory proteins, tetR family AS19_16480 PF04055 Radical SAM superfamily AS19_16490 PF05088 Bacterial NAD-glutamate dehydrogenase AS19_16520 PF00672 HAMP domain AS19_16520 PF00072 Response regulator receiver domain AS19_16520 PF00512 His Kinase A (phospho-acceptor) domain AS19_16520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_16520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS19_16520 PF01627 Hpt domain AS19_16530 PF09334 tRNA synthetases class I (M) AS19_16530 PF01588 Putative tRNA binding domain AS19_16540 PF13545 Crp-like helix-turn-helix domain AS19_16540 PF00027 Cyclic nucleotide-binding domain AS19_16550 PF00596 Class II Aldolase and Adducin N-terminal domain AS19_16640 PF02508 Rnf-Nqr subunit, membrane protein AS19_16650 PF04060 Putative Fe-S cluster AS19_16660 PF10531 SLBB domain AS19_16660 PF13375 RnfC Barrel sandwich hybrid domain AS19_16660 PF12838 4Fe-4S dicluster domain AS19_16660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AS19_16670 PF03116 NQR2, RnfD, RnfE family AS19_16680 PF04205 FMN-binding domain AS19_16690 PF02508 Rnf-Nqr subunit, membrane protein AS19_16710 PF03616 Sodium/glutamate symporter AS19_16720 PF00730 HhH-GPD superfamily base excision DNA repair protein AS19_16720 PF10576 Iron-sulfur binding domain of endonuclease III AS19_16720 PF00633 Helix-hairpin-helix motif AS19_16730 PF01738 Dienelactone hydrolase family AS19_16740 PF01205 Uncharacterized protein family UPF0029 AS19_16740 PF09186 Domain of unknown function (DUF1949) AS19_16760 PF00267 Gram-negative porin AS19_16770 PF03819 MazG nucleotide pyrophosphohydrolase domain AS19_16780 PF02824 TGS domain AS19_16780 PF04607 Region found in RelA / SpoT proteins AS19_16780 PF13291 ACT domain AS19_16790 PF05958 tRNA (Uracil-5-)-methyltransferase AS19_16810 PF00291 Pyridoxal-phosphate dependent enzyme AS19_16820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS19_16820 PF00672 HAMP domain AS19_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_16820 PF00072 Response regulator receiver domain AS19_16820 PF00512 His Kinase A (phospho-acceptor) domain AS19_16820 PF01627 Hpt domain AS19_16830 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AS19_16840 PF11967 Recombination protein O N terminal AS19_16840 PF02565 Recombination protein O C terminal AS19_16850 PF01926 50S ribosome-binding GTPase AS19_16850 PF07650 KH domain AS19_16860 PF00035 Double-stranded RNA binding motif AS19_16860 PF14622 Ribonuclease-III-like AS19_16880 PF10502 Signal peptidase, peptidase S26 AS19_16890 PF06421 GTP-binding protein LepA C-terminus AS19_16890 PF03144 Elongation factor Tu domain 2 AS19_16890 PF00009 Elongation factor Tu GTP binding domain AS19_16890 PF00679 Elongation factor G C-terminus AS19_16900 PF13180 PDZ domain AS19_16920 PF03888 MucB/RseB N-terminal domain AS19_16920 PF17188 MucB/RseB C-terminal domain AS19_16930 PF03873 Anti sigma-E protein RseA, C-terminal domain AS19_16930 PF03872 Anti sigma-E protein RseA, N-terminal domain AS19_16940 PF04542 Sigma-70 region 2 AS19_16940 PF08281 Sigma-70, region 4 AS19_16960 PF00890 FAD binding domain AS19_16960 PF02910 Fumarate reductase flavoprotein C-term AS19_16990 PF01571 Aminomethyltransferase folate-binding domain AS19_17000 PF00378 Enoyl-CoA hydratase/isomerase AS19_17000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS19_17000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS19_17010 PF03167 Uracil DNA glycosylase superfamily AS19_17020 PF00440 Bacterial regulatory proteins, tetR family AS19_17030 PF01336 OB-fold nucleic acid binding domain AS19_17030 PF00152 tRNA synthetases class II (D, K and N) AS19_17040 PF03462 PCRF domain AS19_17040 PF00472 RF-1 domain AS19_17060 PF17768 RecJ OB domain AS19_17060 PF02272 DHHA1 domain AS19_17060 PF01368 DHH family AS19_17070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS19_17070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS19_17070 PF00378 Enoyl-CoA hydratase/isomerase AS19_17080 PF02803 Thiolase, C-terminal domain AS19_17080 PF00108 Thiolase, N-terminal domain AS19_17170 PF00226 DnaJ domain AS19_17170 PF01556 DnaJ C terminal domain AS19_17180 PF13193 AMP-binding enzyme C-terminal domain AS19_17180 PF00501 AMP-binding enzyme AS19_17210 PF13361 UvrD-like helicase C-terminal domain AS19_17210 PF00580 UvrD/REP helicase N-terminal domain AS19_17230 PF08241 Methyltransferase domain AS19_17260 PF00583 Acetyltransferase (GNAT) family AS19_17290 PF12704 MacB-like periplasmic core domain AS19_17290 PF00005 ABC transporter AS19_17290 PF02687 FtsX-like permease family AS19_17320 PF01475 Ferric uptake regulator family AS19_17340 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS19_17340 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS19_17350 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS19_17370 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_17380 PF01979 Amidohydrolase family AS19_17390 PF13419 Haloacid dehalogenase-like hydrolase AS19_17410 PF01507 Phosphoadenosine phosphosulfate reductase family AS19_17430 PF07715 TonB-dependent Receptor Plug Domain AS19_17430 PF00593 TonB dependent receptor AS19_17440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_17440 PF00512 His Kinase A (phospho-acceptor) domain AS19_17440 PF00672 HAMP domain AS19_17440 PF16750 Sensor domain of 2-component histidine kinase AS19_17450 PF00486 Transcriptional regulatory protein, C terminal AS19_17450 PF00072 Response regulator receiver domain AS19_17460 PF00072 Response regulator receiver domain AS19_17460 PF00486 Transcriptional regulatory protein, C terminal AS19_17510 PF03880 DbpA RNA binding domain AS19_17510 PF00270 DEAD/DEAH box helicase AS19_17510 PF00271 Helicase conserved C-terminal domain AS19_17520 PF07311 Dodecin AS19_17530 PF00881 Nitroreductase family AS19_17570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_17570 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_17570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_17580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_17580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_17580 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_17600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS19_17600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_17610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS19_17610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_17620 PF00440 Bacterial regulatory proteins, tetR family AS19_17620 PF02909 Tetracyclin repressor-like, C-terminal domain AS19_17630 PF12697 Alpha/beta hydrolase family AS19_17650 PF00486 Transcriptional regulatory protein, C terminal AS19_17650 PF00072 Response regulator receiver domain AS19_17680 PF02803 Thiolase, C-terminal domain AS19_17680 PF00108 Thiolase, N-terminal domain AS19_17710 PF12833 Helix-turn-helix domain AS19_17710 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_17720 PF00487 Fatty acid desaturase AS19_17730 PF00175 Oxidoreductase NAD-binding domain AS19_17730 PF00970 Oxidoreductase FAD-binding domain AS19_17730 PF00111 2Fe-2S iron-sulfur cluster binding domain AS19_17740 PF00440 Bacterial regulatory proteins, tetR family AS19_17780 PF03466 LysR substrate binding domain AS19_17780 PF00005 ABC transporter AS19_17790 PF00528 Binding-protein-dependent transport system inner membrane component AS19_17800 PF02567 Phenazine biosynthesis-like protein AS19_17810 PF02769 AIR synthase related protein, C-terminal domain AS19_17810 PF00586 AIR synthase related protein, N-terminal domain AS19_17840 PF00588 SpoU rRNA Methylase family AS19_17850 PF00924 Mechanosensitive ion channel AS19_17850 PF12795 Mechanosensitive ion channel porin domain AS19_17850 PF12794 Mechanosensitive ion channel inner membrane domain 1 AS19_17870 PF00501 AMP-binding enzyme AS19_17870 PF13193 AMP-binding enzyme C-terminal domain AS19_17870 PF16177 Acetyl-coenzyme A synthetase N-terminus AS19_17900 PF04013 Putative SAM-dependent RNA methyltransferase AS19_17960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AS19_17990 PF00216 Bacterial DNA-binding protein AS19_18000 PF00575 S1 RNA binding domain AS19_18010 PF02224 Cytidylate kinase AS19_18020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS19_18030 PF00155 Aminotransferase class I and II AS19_18040 PF01842 ACT domain AS19_18040 PF01817 Chorismate mutase type II AS19_18040 PF00800 Prephenate dehydratase AS19_18050 PF00266 Aminotransferase class-V AS19_18060 PF03989 DNA gyrase C-terminal domain, beta-propeller AS19_18060 PF00521 DNA gyrase/topoisomerase IV, subunit A AS19_18070 PF01979 Amidohydrolase family AS19_18090 PF13419 Haloacid dehalogenase-like hydrolase AS19_18100 PF00106 short chain dehydrogenase AS19_18140 PF03109 ABC1 family AS19_18190 PF01230 HIT domain AS19_18210 PF03692 Putative zinc- or iron-chelating domain AS19_18220 PF05166 YcgL domain AS19_18230 PF00570 HRDC domain AS19_18230 PF01612 3'-5' exonuclease AS19_18240 PF00300 Histidine phosphatase superfamily (branch 1) AS19_18260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_18260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_18260 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_18270 PF13662 Toprim domain AS19_18270 PF02132 RecR protein AS19_18280 PF02575 YbaB/EbfC DNA-binding family AS19_18290 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AS19_18290 PF12170 DNA polymerase III tau subunit V interacting with alpha AS19_18290 PF12169 DNA polymerase III subunits gamma and tau domain III AS19_18300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS19_18300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS19_18310 PF00011 Hsp20/alpha crystallin family AS19_18330 PF10722 Putative bacterial sensory transduction regulator AS19_18340 PF03551 Transcriptional regulator PadR-like family AS19_18340 PF10400 Virulence activator alpha C-term AS19_18370 PF01648 4'-phosphopantetheinyl transferase superfamily AS19_18370 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AS19_18380 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS19_18380 PF03033 Glycosyltransferase family 28 N-terminal domain AS19_18390 PF00975 Thioesterase domain AS19_18390 PF00550 Phosphopantetheine attachment site AS19_18390 PF00668 Condensation domain AS19_18390 PF13193 AMP-binding enzyme C-terminal domain AS19_18390 PF00501 AMP-binding enzyme AS19_18410 PF00665 Integrase core domain AS19_18410 PF13333 Integrase core domain AS19_18410 PF13276 HTH-like domain AS19_18460 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AS19_18460 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AS19_18470 PF00893 Small Multidrug Resistance protein AS19_18480 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS19_18480 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS19_18490 PF01979 Amidohydrolase family AS19_18500 PF02599 Global regulator protein family AS19_18510 PF13840 ACT domain AS19_18510 PF01842 ACT domain AS19_18510 PF00696 Amino acid kinase family AS19_18520 PF02272 DHHA1 domain AS19_18520 PF01411 tRNA synthetases class II (A) AS19_18520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS19_18530 PF01925 Sulfite exporter TauE/SafE AS19_18540 PF02631 RecX family AS19_18550 PF00154 recA bacterial DNA recombination protein AS19_18560 PF02464 Competence-damaged protein AS19_18570 PF01709 Transcriptional regulator AS19_18580 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AS19_18580 PF06974 Protein of unknown function (DUF1298) AS19_18600 PF00501 AMP-binding enzyme AS19_18600 PF13193 AMP-binding enzyme C-terminal domain AS19_18670 PF01527 Transposase AS19_18680 PF01624 MutS domain I AS19_18680 PF05188 MutS domain II AS19_18680 PF05192 MutS domain III AS19_18680 PF05190 MutS family domain IV AS19_18680 PF00488 MutS domain V AS19_18690 PF00037 4Fe-4S binding domain AS19_18690 PF11953 Domain of unknown function (DUF3470) AS19_18720 PF00535 Glycosyl transferase family 2 AS19_18750 PF13396 Phospholipase_D-nuclease N-terminal AS19_18750 PF13091 PLD-like domain AS19_18770 PF17946 RecC C-terminal domain AS19_18780 PF12705 PD-(D/E)XK nuclease superfamily AS19_18780 PF13361 UvrD-like helicase C-terminal domain AS19_18780 PF00580 UvrD/REP helicase N-terminal domain AS19_18790 PF13538 UvrD-like helicase C-terminal domain AS19_18800 PF00691 OmpA family AS19_18800 PF05736 OprF membrane domain AS19_18810 PF07027 Protein of unknown function (DUF1318) AS19_18820 PF13617 YnbE-like lipoprotein AS19_18850 PF01926 50S ribosome-binding GTPase AS19_18870 PF18766 SWI2/SNF2 ATPase AS19_18870 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AS19_18870 PF11867 Domain of unknown function (DUF3387) AS19_18900 PF01420 Type I restriction modification DNA specificity domain AS19_18910 PF02384 N-6 DNA Methylase AS19_18930 PF01230 HIT domain AS19_18950 PF00216 Bacterial DNA-binding protein AS19_18960 PF03483 B3/4 domain AS19_18960 PF03484 tRNA synthetase B5 domain AS19_18960 PF03147 Ferredoxin-fold anticodon binding domain AS19_18960 PF01588 Putative tRNA binding domain AS19_18960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AS19_18970 PF01409 tRNA synthetases class II core domain (F) AS19_18970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AS19_18980 PF00453 Ribosomal protein L20 AS19_18990 PF01632 Ribosomal protein L35 AS19_19000 PF05198 Translation initiation factor IF-3, N-terminal domain AS19_19000 PF00707 Translation initiation factor IF-3, C-terminal domain AS19_19040 PF06628 Catalase-related immune-responsive AS19_19040 PF00199 Catalase AS19_19060 PF00005 ABC transporter AS19_19070 PF13533 Biotin-lipoyl like AS19_19080 PF00958 GMP synthase C terminal domain AS19_19080 PF00117 Glutamine amidotransferase class-I AS19_19080 PF02540 NAD synthase AS19_19090 PF00563 EAL domain AS19_19090 PF01590 GAF domain AS19_19090 PF00990 Diguanylate cyclase, GGDEF domain AS19_19090 PF00360 Phytochrome region AS19_19110 PF03109 ABC1 family AS19_19120 PF07690 Major Facilitator Superfamily AS19_19140 PF00117 Glutamine amidotransferase class-I AS19_19140 PF00958 GMP synthase C terminal domain AS19_19140 PF02540 NAD synthase AS19_19150 PF00571 CBS domain AS19_19150 PF00478 IMP dehydrogenase / GMP reductase domain AS19_19160 PF02601 Exonuclease VII, large subunit AS19_19160 PF13742 OB-fold nucleic acid binding domain AS19_19170 PF00672 HAMP domain AS19_19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_19170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS19_19170 PF00512 His Kinase A (phospho-acceptor) domain AS19_19170 PF01627 Hpt domain AS19_19170 PF00072 Response regulator receiver domain AS19_19200 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AS19_19200 PF01926 50S ribosome-binding GTPase AS19_19210 PF13360 PQQ-like domain AS19_19210 PF01011 PQQ enzyme repeat AS19_19230 PF03129 Anticodon binding domain AS19_19230 PF13393 Histidyl-tRNA synthetase AS19_19240 PF04551 GcpE protein AS19_19250 PF13464 Domain of unknown function (DUF4115) AS19_19270 PF04055 Radical SAM superfamily AS19_19280 PF00334 Nucleoside diphosphate kinase AS19_19290 PF01458 Uncharacterized protein family (UPF0051) AS19_19310 PF00005 ABC transporter AS19_19320 PF01458 Uncharacterized protein family (UPF0051) AS19_19330 PF00266 Aminotransferase class-V AS19_19340 PF01521 Iron-sulphur cluster biosynthesis AS19_19360 PF02657 Fe-S metabolism associated domain AS19_19370 PF00266 Aminotransferase class-V AS19_19380 PF02082 Transcriptional regulator AS19_19420 PF04536 TPM domain AS19_19430 PF04011 LemA family AS19_19440 PF01541 GIY-YIG catalytic domain AS19_19480 PF01738 Dienelactone hydrolase family AS19_19510 PF08402 TOBE domain AS19_19510 PF00005 ABC transporter AS19_19530 PF09347 Domain of unknown function (DUF1989) AS19_19540 PF00289 Biotin carboxylase, N-terminal domain AS19_19540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS19_19540 PF02785 Biotin carboxylase C-terminal domain AS19_19570 PF00271 Helicase conserved C-terminal domain AS19_19570 PF18339 RapA N-terminal Tudor like domain 1 AS19_19570 PF00176 SNF2 family N-terminal domain AS19_19570 PF12137 RNA polymerase recycling family C-terminal AS19_19570 PF18337 RapA N-terminal Tudor like domain AS19_19580 PF00561 alpha/beta hydrolase fold AS19_19600 PF00510 Cytochrome c oxidase subunit III AS19_19610 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AS19_19620 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS19_19630 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AS19_19630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS19_19680 PF02628 Cytochrome oxidase assembly protein AS19_19690 PF01040 UbiA prenyltransferase family AS19_19710 PF04011 LemA family AS19_19720 PF01435 Peptidase family M48 AS19_19750 PF00313 'Cold-shock' DNA-binding domain AS19_19760 PF00474 Sodium:solute symporter family AS19_19810 PF00106 short chain dehydrogenase AS19_19830 PF00270 DEAD/DEAH box helicase AS19_19830 PF00271 Helicase conserved C-terminal domain AS19_19840 PF00581 Rhodanese-like domain AS19_19850 PF03922 OmpW family AS19_19870 PF13638 PIN domain AS19_19870 PF02562 PhoH-like protein AS19_19880 PF04191 Phospholipid methyltransferase AS19_19950 PF02630 SCO1/SenC AS19_19960 PF01938 TRAM domain AS19_19960 PF04055 Radical SAM superfamily AS19_19960 PF00919 Uncharacterized protein family UPF0004 AS19_19980 PF02562 PhoH-like protein AS19_19990 PF02130 Uncharacterized protein family UPF0054 AS19_20000 PF03471 Transporter associated domain AS19_20000 PF00571 CBS domain AS19_20030 PF00795 Carbon-nitrogen hydrolase AS19_20040 PF00753 Metallo-beta-lactamase superfamily AS19_20060 PF00916 Sulfate permease family AS19_20060 PF01740 STAS domain AS19_20070 PF00753 Metallo-beta-lactamase superfamily AS19_20070 PF04273 Putative phosphatase (DUF442) AS19_20080 PF00916 Sulfate permease family AS19_20080 PF01740 STAS domain AS19_20090 PF02698 DUF218 domain AS19_20100 PF13603 Leucyl-tRNA synthetase, Domain 2 AS19_20100 PF00133 tRNA synthetases class I (I, L, M and V) AS19_20100 PF08264 Anticodon-binding domain of tRNA AS19_20150 PF00171 Aldehyde dehydrogenase family AS19_20160 PF01467 Cytidylyltransferase-like AS19_20180 PF02590 Predicted SPOUT methyltransferase AS19_20190 PF03717 Penicillin-binding Protein dimerisation domain AS19_20190 PF00905 Penicillin binding protein transpeptidase domain AS19_20200 PF01098 Cell cycle protein AS19_20210 PF13406 Transglycosylase SLT domain AS19_20220 PF03330 Lytic transglycolase AS19_20220 PF05036 Sporulation related domain AS19_20230 PF07943 Penicillin-binding protein 5, C-terminal domain AS19_20230 PF00768 D-alanyl-D-alanine carboxypeptidase AS19_20240 PF01063 Amino-transferase class IV AS19_20250 PF04359 Protein of unknown function (DUF493) AS19_20270 PF03099 Biotin/lipoate A/B protein ligase family AS19_20280 PF04055 Radical SAM superfamily AS19_20280 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AS19_20300 PF17185 NlpE C-terminal OB domain AS19_20300 PF04170 NlpE N-terminal domain AS19_20320 PF01618 MotA/TolQ/ExbB proton channel family AS19_20370 PF02441 Flavoprotein AS19_20390 PF02875 Mur ligase family, glutamate ligase domain AS19_20390 PF08245 Mur ligase middle domain AS19_20390 PF01225 Mur ligase family, catalytic domain AS19_20400 PF00561 alpha/beta hydrolase fold AS19_20410 PF03280 Proteobacterial lipase chaperone protein AS19_20430 PF03069 Acetamidase/Formamidase family AS19_20440 PF07724 AAA domain (Cdc48 subfamily) AS19_20440 PF10431 C-terminal, D2-small domain, of ClpB protein AS19_20450 PF00795 Carbon-nitrogen hydrolase AS19_20460 PF00005 ABC transporter AS19_20470 PF00005 ABC transporter AS19_20480 PF02653 Branched-chain amino acid transport system / permease component AS19_20490 PF11862 Domain of unknown function (DUF3382) AS19_20490 PF02653 Branched-chain amino acid transport system / permease component AS19_20500 PF13458 Periplasmic binding protein AS19_20510 PF00072 Response regulator receiver domain AS19_20510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS19_20510 PF01627 Hpt domain AS19_20510 PF00512 His Kinase A (phospho-acceptor) domain AS19_20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_20520 PF00072 Response regulator receiver domain AS19_20520 PF00486 Transcriptional regulatory protein, C terminal AS19_20540 PF00365 Phosphofructokinase AS19_20550 PF00860 Permease family AS19_20590 PF00719 Inorganic pyrophosphatase AS19_20600 PF02311 AraC-like ligand binding domain AS19_20600 PF12833 Helix-turn-helix domain AS19_20620 PF05958 tRNA (Uracil-5-)-methyltransferase AS19_20620 PF01938 TRAM domain AS19_20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_20650 PF08521 Two-component sensor kinase N-terminal AS19_20650 PF00512 His Kinase A (phospho-acceptor) domain AS19_20660 PF00486 Transcriptional regulatory protein, C terminal AS19_20660 PF00072 Response regulator receiver domain AS19_20670 PF02424 ApbE family AS19_20700 PF00578 AhpC/TSA family AS19_20710 PF02683 Cytochrome C biogenesis protein transmembrane region AS19_20710 PF11412 Disulphide bond corrector protein DsbC AS19_20720 PF01220 Dehydroquinase class II AS19_20730 PF00364 Biotin-requiring enzyme AS19_20740 PF02785 Biotin carboxylase C-terminal domain AS19_20740 PF00289 Biotin carboxylase, N-terminal domain AS19_20740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS19_20770 PF01207 Dihydrouridine synthase (Dus) AS19_20780 PF02954 Bacterial regulatory protein, Fis family AS19_20790 PF01808 AICARFT/IMPCHase bienzyme AS19_20790 PF02142 MGS-like domain AS19_20800 PF02844 Phosphoribosylglycinamide synthetase, N domain AS19_20800 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AS19_20800 PF02843 Phosphoribosylglycinamide synthetase, C domain AS19_20820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS19_20820 PF00072 Response regulator receiver domain AS19_20820 PF00672 HAMP domain AS19_20820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_20820 PF00512 His Kinase A (phospho-acceptor) domain AS19_20820 PF01627 Hpt domain AS19_20830 PF01434 Peptidase family M41 AS19_20830 PF17862 AAA+ lid domain AS19_20830 PF00004 ATPase family associated with various cellular activities (AAA) AS19_20840 PF03232 Ubiquinone biosynthesis protein COQ7 AS19_20850 PF02675 S-adenosylmethionine decarboxylase AS19_20860 PF02566 OsmC-like protein AS19_20870 PF00027 Cyclic nucleotide-binding domain AS19_20870 PF13545 Crp-like helix-turn-helix domain AS19_20880 PF00218 Indole-3-glycerol phosphate synthase AS19_20890 PF02885 Glycosyl transferase family, helical bundle domain AS19_20890 PF00591 Glycosyl transferase family, a/b domain AS19_20900 PF00117 Glutamine amidotransferase class-I AS19_20910 PF04715 Anthranilate synthase component I, N terminal region AS19_20910 PF00425 chorismate binding enzyme AS19_20950 PF00072 Response regulator receiver domain AS19_20960 PF00512 His Kinase A (phospho-acceptor) domain AS19_20960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_20980 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AS19_20990 PF00510 Cytochrome c oxidase subunit III AS19_21000 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS19_21010 PF06481 COX Aromatic Rich Motif AS19_21010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS19_21020 PF00083 Sugar (and other) transporter AS19_21020 PF07690 Major Facilitator Superfamily AS19_21030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_21030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS19_21040 PF01638 HxlR-like helix-turn-helix AS19_21050 PF00877 NlpC/P60 family AS19_21060 PF00834 Ribulose-phosphate 3 epimerase family AS19_21070 PF00483 Nucleotidyl transferase AS19_21080 PF01636 Phosphotransferase enzyme family AS19_21090 PF03968 OstA-like protein AS19_21090 PF04453 LPS transport system D AS19_21100 PF00639 PPIC-type PPIASE domain AS19_21100 PF09312 SurA N-terminal domain AS19_21110 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AS19_21120 PF00398 Ribosomal RNA adenine dimethylase AS19_21130 PF04379 ApaG domain AS19_21140 PF00149 Calcineurin-like phosphoesterase AS19_21160 PF01966 HD domain AS19_21160 PF12627 Probable RNA and SrmB- binding site of polymerase A AS19_21160 PF01743 Poly A polymerase head domain AS19_21200 PF01227 GTP cyclohydrolase I AS19_21200 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS19_21210 PF02152 Dihydroneopterin aldolase AS19_21220 PF02660 Glycerol-3-phosphate acyltransferase AS19_21230 PF00814 Glycoprotease family AS19_21240 PF01165 Ribosomal protein S21 AS19_21250 PF09424 Yqey-like protein AS19_21260 PF01807 CHC2 zinc finger AS19_21260 PF13662 Toprim domain AS19_21260 PF08278 DNA primase DnaG DnaB-binding AS19_21260 PF10410 DnaB-helicase binding domain of primase AS19_21260 PF08275 DNA primase catalytic core, N-terminal domain AS19_21280 PF04539 Sigma-70 region 3 AS19_21280 PF03979 Sigma-70 factor, region 1.1 AS19_21280 PF00140 Sigma-70 factor, region 1.2 AS19_21280 PF04542 Sigma-70 region 2 AS19_21280 PF04545 Sigma-70, region 4 AS19_21280 PF04546 Sigma-70, non-essential region AS19_21290 PF00665 Integrase core domain AS19_21290 PF13333 Integrase core domain AS19_21290 PF13276 HTH-like domain AS19_21300 PF01527 Transposase AS19_21320 PF00012 Hsp70 protein AS19_21340 PF00271 Helicase conserved C-terminal domain AS19_21340 PF00270 DEAD/DEAH box helicase AS19_21340 PF03880 DbpA RNA binding domain AS19_21350 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AS19_21350 PF01648 4'-phosphopantetheinyl transferase superfamily AS19_21370 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AS19_21390 PF00593 TonB dependent receptor AS19_21390 PF07715 TonB-dependent Receptor Plug Domain AS19_21400 PF00550 Phosphopantetheine attachment site AS19_21400 PF00501 AMP-binding enzyme AS19_21400 PF13193 AMP-binding enzyme C-terminal domain AS19_21400 PF00668 Condensation domain AS19_21410 PF13193 AMP-binding enzyme C-terminal domain AS19_21410 PF00668 Condensation domain AS19_21410 PF00501 AMP-binding enzyme AS19_21410 PF00550 Phosphopantetheine attachment site AS19_21420 PF03621 MbtH-like protein AS19_21430 PF00005 ABC transporter AS19_21460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_21460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_21460 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_21460 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS19_21470 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS19_21470 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS19_21480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS19_21480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS19_21490 PF04304 Protein of unknown function (DUF454) AS19_21500 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS19_21500 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_21500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_21500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_21510 PF03966 Trm112p-like protein AS19_21520 PF02253 Phospholipase A1 AS19_21550 PF00743 Flavin-binding monooxygenase-like AS19_21560 PF07859 alpha/beta hydrolase fold AS19_21570 PF00106 short chain dehydrogenase AS19_21600 PF00106 short chain dehydrogenase AS19_21610 PF04336 Acyl carrier protein phosphodiesterase AS19_21630 PF01230 HIT domain AS19_21650 PF03466 LysR substrate binding domain AS19_21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_21670 PF01590 GAF domain AS19_21670 PF00990 Diguanylate cyclase, GGDEF domain AS19_21670 PF00360 Phytochrome region AS19_21670 PF00563 EAL domain AS19_21680 PF00970 Oxidoreductase FAD-binding domain AS19_21680 PF00175 Oxidoreductase NAD-binding domain AS19_21680 PF00042 Globin AS19_21690 PF02082 Transcriptional regulator AS19_21710 PF03466 LysR substrate binding domain AS19_21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_21720 PF00667 FAD binding domain AS19_21720 PF00175 Oxidoreductase NAD-binding domain AS19_21720 PF00258 Flavodoxin AS19_21730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS19_21730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS19_21780 PF03060 Nitronate monooxygenase AS19_21800 PF04343 Protein of unknown function, DUF488 AS19_21820 PF00072 Response regulator receiver domain AS19_21830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS19_21830 PF03129 Anticodon binding domain AS19_21830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS19_21830 PF02824 TGS domain AS19_21840 PF01502 Phosphoribosyl-AMP cyclohydrolase AS19_21850 PF01406 tRNA synthetases class I (C) catalytic domain AS19_21850 PF09190 DALR domain AS19_21900 PF07715 TonB-dependent Receptor Plug Domain AS19_21900 PF00593 TonB dependent receptor AS19_21940 PF00474 Sodium:solute symporter family AS19_21970 PF02649 Type I GTP cyclohydrolase folE2 AS19_21990 PF03480 Bacterial extracellular solute-binding protein, family 7 AS19_22000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AS19_22010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AS19_22030 PF00583 Acetyltransferase (GNAT) family AS19_22040 PF00202 Aminotransferase class-III AS19_22050 PF06339 Ectoine synthase AS19_22070 PF00196 Bacterial regulatory proteins, luxR family AS19_22070 PF00072 Response regulator receiver domain AS19_22080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_22080 PF09456 RcsC Alpha-Beta-Loop (ABL) AS19_22080 PF00072 Response regulator receiver domain AS19_22080 PF00512 His Kinase A (phospho-acceptor) domain AS19_22100 PF02811 PHP domain AS19_22100 PF11490 DNA polymerase III polC-type N-terminus II AS19_22100 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS19_22100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS19_22100 PF14579 Helix-hairpin-helix motif AS19_22100 PF00929 Exonuclease AS19_22100 PF01336 OB-fold nucleic acid binding domain AS19_22100 PF14480 DNA polymerase III polC-type N-terminus I AS19_22120 PF00474 Sodium:solute symporter family AS19_22160 PF01207 Dihydrouridine synthase (Dus) AS19_22180 PF02609 Exonuclease VII small subunit AS19_22190 PF00348 Polyprenyl synthetase AS19_22200 PF02779 Transketolase, pyrimidine binding domain AS19_22200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AS19_22200 PF02780 Transketolase, C-terminal domain AS19_22210 PF01590 GAF domain AS19_22210 PF00990 Diguanylate cyclase, GGDEF domain AS19_22210 PF00360 Phytochrome region AS19_22210 PF00563 EAL domain AS19_22220 PF04608 Phosphatidylglycerophosphatase A AS19_22230 PF02769 AIR synthase related protein, C-terminal domain AS19_22230 PF00586 AIR synthase related protein, N-terminal domain AS19_22240 PF01029 NusB family AS19_22250 PF00885 6,7-dimethyl-8-ribityllumazine synthase AS19_22260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS19_22260 PF00925 GTP cyclohydrolase II AS19_22270 PF00677 Lumazine binding domain AS19_22280 PF01872 RibD C-terminal domain AS19_22280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS19_22290 PF03477 ATP cone domain AS19_22300 PF00464 Serine hydroxymethyltransferase AS19_22310 PF12848 ABC transporter AS19_22310 PF00005 ABC transporter AS19_22330 PF08281 Sigma-70, region 4 AS19_22330 PF04542 Sigma-70 region 2 AS19_22360 PF13847 Methyltransferase domain AS19_22370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS19_22370 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_22370 PF00403 Heavy-metal-associated domain AS19_22390 PF18073 Rubredoxin metal binding domain AS19_22400 PF01168 Alanine racemase, N-terminal domain AS19_22400 PF00842 Alanine racemase, C-terminal domain AS19_22410 PF03796 DnaB-like helicase C terminal domain AS19_22410 PF00772 DnaB-like helicase N terminal domain AS19_22420 PF01281 Ribosomal protein L9, N-terminal domain AS19_22420 PF03948 Ribosomal protein L9, C-terminal domain AS19_22430 PF01084 Ribosomal protein S18 AS19_22450 PF01250 Ribosomal protein S6 AS19_22460 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS19_22460 PF00588 SpoU rRNA Methylase family AS19_22470 PF00575 S1 RNA binding domain AS19_22470 PF08461 Ribonuclease R winged-helix domain AS19_22470 PF08206 Ribonuclease B OB domain AS19_22470 PF00773 RNB domain AS19_22470 PF17876 Cold shock domain AS19_22510 PF00709 Adenylosuccinate synthetase AS19_22520 PF13393 Histidyl-tRNA synthetase AS19_22540 PF01145 SPFH domain / Band 7 family AS19_22550 PF12221 Bacterial membrane protein N terminal AS19_22550 PF01145 SPFH domain / Band 7 family AS19_22560 PF16360 GTP-binding GTPase Middle Region AS19_22560 PF13167 GTP-binding GTPase N-terminal AS19_22560 PF01926 50S ribosome-binding GTPase AS19_22570 PF17209 Hfq protein AS19_22590 PF01119 DNA mismatch repair protein, C-terminal domain AS19_22590 PF08676 MutL C terminal dimerisation domain AS19_22600 PF11741 AMIN domain AS19_22600 PF01520 N-acetylmuramoyl-L-alanine amidase AS19_22610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AS19_22620 PF01256 Carbohydrate kinase AS19_22620 PF03853 YjeF-related protein N-terminus AS19_22630 PF08331 Domain of unknown function (DUF1730) AS19_22640 PF00929 Exonuclease AS19_22650 PF03193 RsgA GTPase AS19_22670 PF00581 Rhodanese-like domain AS19_22680 PF02666 Phosphatidylserine decarboxylase AS19_22720 PF08241 Methyltransferase domain AS19_22730 PF00561 alpha/beta hydrolase fold AS19_22740 PF00155 Aminotransferase class I and II AS19_22750 PF04055 Radical SAM superfamily AS19_22750 PF06968 Biotin and Thiamin Synthesis associated domain AS19_22760 PF00156 Phosphoribosyl transferase domain AS19_22770 PF04029 2-phosphosulpholactate phosphatase AS19_22780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_22780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_22780 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_22800 PF01329 Pterin 4 alpha carbinolamine dehydratase AS19_22820 PF01208 Uroporphyrinogen decarboxylase (URO-D) AS19_22830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AS19_22830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_22840 PF00310 Glutamine amidotransferases class-II AS19_22840 PF01493 GXGXG motif AS19_22840 PF04898 Glutamate synthase central domain AS19_22840 PF01645 Conserved region in glutamate synthase AS19_22860 PF01761 3-dehydroquinate synthase AS19_22870 PF01202 Shikimate kinase AS19_22880 PF07660 Secretin and TonB N terminus short domain AS19_22880 PF00263 Bacterial type II and III secretion system protein AS19_22880 PF11741 AMIN domain AS19_22880 PF03958 Bacterial type II/III secretion system short domain AS19_22930 PF00912 Transglycosylase AS19_22930 PF00905 Penicillin binding protein transpeptidase domain AS19_22930 PF17092 Penicillin-binding protein OB-like domain AS19_22940 PF03949 Malic enzyme, NAD binding domain AS19_22940 PF00390 Malic enzyme, N-terminal domain AS19_22950 PF01197 Ribosomal protein L31 AS19_22960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AS19_22960 PF18074 Primosomal protein N C-terminal domain AS19_22960 PF17764 3′ DNA-binding domain (3′BD) AS19_22960 PF00271 Helicase conserved C-terminal domain AS19_22960 PF00270 DEAD/DEAH box helicase AS19_22970 PF03485 Arginyl tRNA synthetase N terminal domain AS19_22970 PF00750 tRNA synthetases class I (R) AS19_22970 PF05746 DALR anticodon binding domain AS19_22990 PF00227 Proteasome subunit AS19_23000 PF07724 AAA domain (Cdc48 subfamily) AS19_23000 PF00004 ATPase family associated with various cellular activities (AAA) AS19_23000 PF10431 C-terminal, D2-small domain, of ClpB protein AS19_23020 PF01209 ubiE/COQ5 methyltransferase family AS19_23040 PF03109 ABC1 family AS19_23050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AS19_23060 PF02416 mttA/Hcf106 family AS19_23070 PF02416 mttA/Hcf106 family AS19_23080 PF00902 Sec-independent protein translocase protein (TatC) AS19_23120 PF02580 D-Tyr-tRNA(Tyr) deacylase AS19_23130 PF00561 alpha/beta hydrolase fold AS19_23150 PF02954 Bacterial regulatory protein, Fis family AS19_23150 PF00072 Response regulator receiver domain AS19_23150 PF00158 Sigma-54 interaction domain AS19_23160 PF00512 His Kinase A (phospho-acceptor) domain AS19_23160 PF00989 PAS fold AS19_23160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_23180 PF03951 Glutamine synthetase, beta-Grasp domain AS19_23180 PF00120 Glutamine synthetase, catalytic domain AS19_23210 PF11893 Domain of unknown function (DUF3413) AS19_23210 PF00884 Sulfatase AS19_23270 PF00588 SpoU rRNA Methylase family AS19_23280 PF02556 Preprotein translocase subunit SecB AS19_23290 PF00462 Glutaredoxin AS19_23300 PF00581 Rhodanese-like domain AS19_23310 PF01551 Peptidase family M23 AS19_23320 PF13180 PDZ domain AS19_23320 PF03572 Peptidase family S41 AS19_23330 PF04748 Divergent polysaccharide deacetylase AS19_23340 PF00977 Histidine biosynthesis protein AS19_23350 PF00977 Histidine biosynthesis protein AS19_23360 PF00117 Glutamine amidotransferase class-I AS19_23370 PF00475 Imidazoleglycerol-phosphate dehydratase AS19_23390 PF07689 KaiB domain AS19_23390 PF00512 His Kinase A (phospho-acceptor) domain AS19_23390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_23410 PF10576 Iron-sulfur binding domain of endonuclease III AS19_23410 PF00730 HhH-GPD superfamily base excision DNA repair protein AS19_23410 PF14815 NUDIX domain AS19_23410 PF00633 Helix-hairpin-helix motif AS19_23420 PF04362 Bacterial Fe(2+) trafficking AS19_23500 PF00589 Phage integrase family AS19_23500 PF13356 Arm DNA-binding domain AS19_23510 PF00067 Cytochrome P450 AS19_23520 PF01435 Peptidase family M48 AS19_23530 PF01467 Cytidylyltransferase-like AS19_23530 PF00294 pfkB family carbohydrate kinase AS19_23550 PF03279 Bacterial lipid A biosynthesis acyltransferase AS19_23580 PF00535 Glycosyl transferase family 2 AS19_23600 PF13439 Glycosyltransferase Family 4 AS19_23600 PF00534 Glycosyl transferases group 1 AS19_23610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AS19_23630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AS19_23640 PF01063 Amino-transferase class IV AS19_23650 PF08335 GlnD PII-uridylyltransferase AS19_23650 PF03710 Glutamate-ammonia ligase adenylyltransferase AS19_23660 PF00437 Type II/IV secretion system protein AS19_23670 PF01865 Protein of unknown function DUF47 AS19_23680 PF01384 Phosphate transporter family AS19_23690 PF00583 Acetyltransferase (GNAT) family AS19_23690 PF00696 Amino acid kinase family AS19_23760 PF00920 Dehydratase family AS19_23790 PF00111 2Fe-2S iron-sulfur cluster binding domain AS19_23800 PF04403 Paraquat-inducible protein A AS19_23810 PF02470 MlaD protein AS19_23840 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AS19_23850 PF02602 Uroporphyrinogen-III synthase HemD AS19_23860 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AS19_23860 PF03900 Porphobilinogen deaminase, C-terminal domain AS19_23870 PF04397 LytTr DNA-binding domain AS19_23870 PF00072 Response regulator receiver domain AS19_23880 PF06580 Histidine kinase AS19_23880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_23880 PF07694 5TMR of 5TMR-LYT AS19_23890 PF00206 Lyase AS19_23890 PF14698 Argininosuccinate lyase C-terminal AS19_23900 PF14760 Rnk N-terminus AS19_23900 PF01272 Transcription elongation factor, GreA/GreB, C-term AS19_23920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AS19_23920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS19_23950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AS19_23960 PF01678 Diaminopimelate epimerase AS19_23980 PF02899 Phage integrase, N-terminal SAM-like domain AS19_23980 PF00589 Phage integrase family AS19_24000 PF04287 tRNA pseudouridine synthase C AS19_24060 PF00186 Dihydrofolate reductase AS19_24070 PF00303 Thymidylate synthase AS19_24080 PF01790 Prolipoprotein diacylglyceryl transferase AS19_24090 PF01925 Sulfite exporter TauE/SafE AS19_24110 PF00391 PEP-utilising enzyme, mobile domain AS19_24110 PF05524 PEP-utilising enzyme, N-terminal AS19_24110 PF01590 GAF domain AS19_24110 PF02896 PEP-utilising enzyme, TIM barrel domain AS19_24120 PF00293 NUDIX domain AS19_24160 PF00403 Heavy-metal-associated domain AS19_24170 PF00398 Ribosomal RNA adenine dimethylase AS19_24220 PF07732 Multicopper oxidase AS19_24220 PF00394 Multicopper oxidase AS19_24220 PF07731 Multicopper oxidase AS19_24230 PF05275 Copper resistance protein B precursor (CopB) AS19_24240 PF00484 Carbonic anhydrase AS19_24250 PF06463 Molybdenum Cofactor Synthesis C AS19_24250 PF04055 Radical SAM superfamily AS19_24260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS19_24270 PF01177 Asp/Glu/Hydantoin racemase AS19_24280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS19_24280 PF07685 CobB/CobQ-like glutamine amidotransferase domain AS19_24290 PF12557 Cob(I)alamin adenosyltransferase N terminal AS19_24290 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AS19_24300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS19_24300 PF07685 CobB/CobQ-like glutamine amidotransferase domain AS19_24310 PF00005 ABC transporter AS19_24320 PF01032 FecCD transport family AS19_24330 PF01497 Periplasmic binding protein AS19_24340 PF07715 TonB-dependent Receptor Plug Domain AS19_24340 PF00593 TonB dependent receptor AS19_24360 PF03150 Di-haem cytochrome c peroxidase AS19_24380 PF00155 Aminotransferase class I and II AS19_24390 PF17113 Regulatory signalling modulator protein AmpE AS19_24390 PF03186 CobD/Cbib protein AS19_24400 PF02277 Phosphoribosyltransferase AS19_24420 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AS19_24430 PF03831 PhnA domain AS19_24430 PF08274 PhnA Zinc-Ribbon AS19_24440 PF03453 MoeA N-terminal region (domain I and II) AS19_24440 PF03454 MoeA C-terminal region (domain IV) AS19_24440 PF00994 Probable molybdopterin binding domain AS19_24450 PF00994 Probable molybdopterin binding domain AS19_24460 PF00067 Cytochrome P450 AS19_24470 PF05552 Conserved TM helix AS19_24470 PF00924 Mechanosensitive ion channel AS19_24480 PF00753 Metallo-beta-lactamase superfamily AS19_24520 PF01894 Uncharacterised protein family UPF0047 AS19_24530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS19_24530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS19_24550 PF00743 Flavin-binding monooxygenase-like AS19_24560 PF00106 short chain dehydrogenase AS19_24580 PF00355 Rieske [2Fe-2S] domain AS19_24590 PF17810 Arginine decarboxylase helical bundle domain AS19_24590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS19_24590 PF17944 Arginine decarboxylase C-terminal helical extension AS19_24600 PF17284 Spermidine synthase tetramerisation domain AS19_24630 PF03466 LysR substrate binding domain AS19_24630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_24650 PF00106 short chain dehydrogenase AS19_24660 PF02470 MlaD protein AS19_24670 PF04403 Paraquat-inducible protein A AS19_24690 PF00270 DEAD/DEAH box helicase AS19_24690 PF00271 Helicase conserved C-terminal domain AS19_24720 PF18030 RimK PreATP-grasp domain AS19_24720 PF08443 RimK-like ATP-grasp domain AS19_24730 PF04381 Putative exonuclease, RdgC AS19_24740 PF00248 Aldo/keto reductase family AS19_24750 PF00561 alpha/beta hydrolase fold AS19_24760 PF09905 DNA-binding protein VF530 AS19_24780 PF16925 Tetracyclin repressor-like, C-terminal domain AS19_24780 PF00440 Bacterial regulatory proteins, tetR family AS19_24790 PF00465 Iron-containing alcohol dehydrogenase AS19_24810 PF02322 Cytochrome bd terminal oxidase subunit II AS19_24820 PF01654 Cytochrome bd terminal oxidase subunit I AS19_24840 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AS19_24850 PF02798 Glutathione S-transferase, N-terminal domain AS19_24870 PF03466 LysR substrate binding domain AS19_24870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS19_24910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS19_24910 PF13192 Thioredoxin domain AS19_24920 PF00578 AhpC/TSA family AS19_24920 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS19_24940 PF00563 EAL domain AS19_24940 PF13426 PAS domain AS19_24940 PF00990 Diguanylate cyclase, GGDEF domain AS19_24940 PF05231 MASE1 AS19_24940 PF08448 PAS fold AS19_24940 PF08447 PAS fold AS19_24950 PF00912 Transglycosylase AS19_24980 PF08502 LeuA allosteric (dimerisation) domain AS19_24980 PF00682 HMGL-like AS19_24990 PF01037 Lrp/AsnC ligand binding domain AS19_25010 PF00378 Enoyl-CoA hydratase/isomerase AS19_25040 PF00990 Diguanylate cyclase, GGDEF domain AS19_25040 PF05230 MASE2 domain AS19_25060 PF04055 Radical SAM superfamily AS19_25070 PF08207 Elongation factor P (EF-P) KOW-like domain AS19_25070 PF09285 Elongation factor P, C-terminal AS19_25070 PF01132 Elongation factor P (EF-P) OB domain AS19_25080 PF00152 tRNA synthetases class II (D, K and N) AS19_25100 PF00561 alpha/beta hydrolase fold AS19_25120 PF02803 Thiolase, C-terminal domain AS19_25120 PF00108 Thiolase, N-terminal domain AS19_25130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_25130 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_25130 PF09317 Domain of unknown function (DUF1974) AS19_25130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_25140 PF07859 alpha/beta hydrolase fold AS19_25170 PF01272 Transcription elongation factor, GreA/GreB, C-term AS19_25170 PF03449 Transcription elongation factor, N-terminal AS19_25190 PF00490 Delta-aminolevulinic acid dehydratase AS19_25200 PF13089 Polyphosphate kinase N-terminal domain AS19_25200 PF17941 Polyphosphate kinase C-terminal domain 1 AS19_25200 PF13090 Polyphosphate kinase C-terminal domain 2 AS19_25200 PF02503 Polyphosphate kinase middle domain AS19_25210 PF02541 Ppx/GppA phosphatase family AS19_25220 PF00085 Thioredoxin AS19_25230 PF07497 Rho termination factor, RNA-binding domain AS19_25230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS19_25230 PF07498 Rho termination factor, N-terminal domain AS19_25250 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AS19_25260 PF04030 D-arabinono-1,4-lactone oxidase AS19_25260 PF01565 FAD binding domain AS19_25300 PF00593 TonB dependent receptor AS19_25300 PF07715 TonB-dependent Receptor Plug Domain AS19_25310 PF01425 Amidase AS19_25320 PF08240 Alcohol dehydrogenase GroES-like domain AS19_25320 PF00107 Zinc-binding dehydrogenase AS19_25350 PF00593 TonB dependent receptor AS19_25350 PF07660 Secretin and TonB N terminus short domain AS19_25350 PF07715 TonB-dependent Receptor Plug Domain AS19_25370 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AS19_25400 PF01553 Acyltransferase AS19_25410 PF00521 DNA gyrase/topoisomerase IV, subunit A AS19_25410 PF03989 DNA gyrase C-terminal domain, beta-propeller AS19_25420 PF01751 Toprim domain AS19_25420 PF00204 DNA gyrase B AS19_25420 PF00986 DNA gyrase B subunit, carboxyl terminus AS19_25420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_25430 PF05728 Uncharacterised protein family (UPF0227) AS19_25440 PF00149 Calcineurin-like phosphoesterase AS19_25450 PF06853 Protein of unknown function (DUF1249) AS19_25460 PF00293 NUDIX domain AS19_25470 PF01964 Radical SAM ThiC family AS19_25470 PF13667 ThiC-associated domain AS19_25480 PF02321 Outer membrane efflux protein AS19_25490 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AS19_25500 PF01266 FAD dependent oxidoreductase AS19_25510 PF00248 Aldo/keto reductase family AS19_25540 PF01425 Amidase AS19_25560 PF00392 Bacterial regulatory proteins, gntR family AS19_25560 PF07729 FCD domain AS19_25580 PF02653 Branched-chain amino acid transport system / permease component AS19_25600 PF00005 ABC transporter AS19_25600 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS19_25610 PF00005 ABC transporter AS19_25630 PF01758 Sodium Bile acid symporter family AS19_25650 PF00512 His Kinase A (phospho-acceptor) domain AS19_25650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_25650 PF00072 Response regulator receiver domain AS19_25650 PF09308 LuxQ, periplasmic AS19_25660 PF00072 Response regulator receiver domain AS19_25660 PF00196 Bacterial regulatory proteins, luxR family AS19_25670 PF00072 Response regulator receiver domain AS19_25670 PF00196 Bacterial regulatory proteins, luxR family AS19_25680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_25680 PF00512 His Kinase A (phospho-acceptor) domain AS19_25700 PF00873 AcrB/AcrD/AcrF family AS19_25710 PF13533 Biotin-lipoyl like AS19_25770 PF10672 S-adenosylmethionine-dependent methyltransferase AS19_25770 PF17785 PUA-like domain AS19_25780 PF00909 Ammonium Transporter Family AS19_25790 PF00543 Nitrogen regulatory protein P-II AS19_25800 PF04380 Membrane fusogenic activity AS19_25810 PF01078 Magnesium chelatase, subunit ChlI AS19_25810 PF13335 Magnesium chelatase, subunit ChlI C-terminal AS19_25850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_25850 PF12833 Helix-turn-helix domain AS19_25860 PF00849 RNA pseudouridylate synthase AS19_25860 PF01479 S4 domain AS19_25870 PF00580 UvrD/REP helicase N-terminal domain AS19_25870 PF13361 UvrD-like helicase C-terminal domain AS19_25890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS19_25910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS19_25910 PF00512 His Kinase A (phospho-acceptor) domain AS19_25930 PF00072 Response regulator receiver domain AS19_25930 PF00486 Transcriptional regulatory protein, C terminal AS19_25940 PF00893 Small Multidrug Resistance protein AS19_25950 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS19_25950 PF12833 Helix-turn-helix domain AS19_26050 PF01053 Cys/Met metabolism PLP-dependent enzyme AS19_26060 PF00378 Enoyl-CoA hydratase/isomerase AS19_26090 PF00924 Mechanosensitive ion channel AS19_26090 PF12795 Mechanosensitive ion channel porin domain AS19_26090 PF12794 Mechanosensitive ion channel inner membrane domain 1 AS19_26150 PF00675 Insulinase (Peptidase family M16) AS19_26150 PF05193 Peptidase M16 inactive domain AS19_26160 PF00448 SRP54-type protein, GTPase domain AS19_26160 PF02881 SRP54-type protein, helical bundle domain AS19_26170 PF00005 ABC transporter AS19_26180 PF18075 FtsX extracellular domain AS19_26190 PF04545 Sigma-70, region 4 AS19_26190 PF04542 Sigma-70 region 2 AS19_26190 PF00140 Sigma-70 factor, region 1.2 AS19_26200 PF04241 Protein of unknown function (DUF423) AS19_26210 PF02597 ThiS family AS19_26210 PF05690 Thiazole biosynthesis protein ThiG AS19_26220 PF05690 Thiazole biosynthesis protein ThiG AS19_26230 PF02390 Putative methyltransferase AS19_26260 PF00561 alpha/beta hydrolase fold AS19_26270 PF00561 alpha/beta hydrolase fold AS19_26270 PF07021 Methionine biosynthesis protein MetW AS19_26280 PF01725 Ham1 family AS19_26290 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AS19_26300 PF06969 HemN C-terminal domain AS19_26300 PF04055 Radical SAM superfamily AS19_26310 PF00440 Bacterial regulatory proteins, tetR family AS19_26310 PF17932 Tetracyclin repressor-like, C-terminal domain AS19_26330 PF06827 Zinc finger found in FPG and IleRS AS19_26330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AS19_26330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AS19_26340 PF01968 Hydantoinase/oxoprolinase AS19_26340 PF05378 Hydantoinase/oxoprolinase N-terminal region AS19_26380 PF01810 LysE type translocator AS19_26390 PF13276 HTH-like domain AS19_26390 PF13333 Integrase core domain AS19_26390 PF00665 Integrase core domain AS19_26400 PF13276 HTH-like domain AS19_26400 PF00665 Integrase core domain AS19_26400 PF13333 Integrase core domain AS19_26430 PF13276 HTH-like domain AS19_26430 PF00665 Integrase core domain AS19_26430 PF13333 Integrase core domain AS19_26480 PF00589 Phage integrase family AS19_26480 PF13495 Phage integrase, N-terminal SAM-like domain AS19_26490 PF02347 Glycine cleavage system P-protein AS19_26500 PF02347 Glycine cleavage system P-protein AS19_26510 PF01597 Glycine cleavage H-protein AS19_26520 PF08669 Glycine cleavage T-protein C-terminal barrel domain AS19_26520 PF01571 Aminomethyltransferase folate-binding domain AS19_26530 PF13205 Bacterial Ig-like domain AS19_26540 PF00528 Binding-protein-dependent transport system inner membrane component AS19_26560 PF01494 FAD binding domain AS19_26570 PF01494 FAD binding domain AS19_26580 PF05195 Aminopeptidase P, N-terminal domain AS19_26580 PF00557 Metallopeptidase family M24 AS19_26590 PF03695 Uncharacterised protein family (UPF0149) AS19_26610 PF05164 Cell division protein ZapA AS19_26630 PF01812 5-formyltetrahydrofolate cyclo-ligase family AS19_26650 PF00291 Pyridoxal-phosphate dependent enzyme AS19_26650 PF00585 C-terminal regulatory domain of Threonine dehydratase AS19_26660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AS19_26720 PF01116 Fructose-bisphosphate aldolase class-II AS19_26730 PF00162 Phosphoglycerate kinase AS19_26740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS19_26740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS19_26750 PF02779 Transketolase, pyrimidine binding domain AS19_26750 PF00456 Transketolase, thiamine diphosphate binding domain AS19_26750 PF02780 Transketolase, C-terminal domain AS19_26760 PF01022 Bacterial regulatory protein, arsR family AS19_26770 PF02772 S-adenosylmethionine synthetase, central domain AS19_26770 PF00438 S-adenosylmethionine synthetase, N-terminal domain AS19_26770 PF02773 S-adenosylmethionine synthetase, C-terminal domain AS19_26780 PF05221 S-adenosyl-L-homocysteine hydrolase AS19_26780 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AS19_26790 PF02219 Methylenetetrahydrofolate reductase AS19_26810 PF00224 Pyruvate kinase, barrel domain AS19_26810 PF02887 Pyruvate kinase, alpha/beta domain AS19_26840 PF01554 MatE AS19_26870 PF06865 Pyrimidine/purine nucleoside phosphorylase AS19_26900 PF01699 Sodium/calcium exchanger protein AS19_26910 PF00873 AcrB/AcrD/AcrF family AS19_26920 PF13533 Biotin-lipoyl like AS19_26930 PF08534 Redoxin AS19_26930 PF00462 Glutaredoxin AS19_26940 PF00210 Ferritin-like domain AS19_26950 PF03006 Haemolysin-III related AS19_26970 PF04143 Sulphur transport AS19_26990 PF00255 Glutathione peroxidase AS19_27010 PF01966 HD domain AS19_27020 PF00364 Biotin-requiring enzyme AS19_27020 PF00561 alpha/beta hydrolase fold AS19_27060 PF13462 Thioredoxin AS19_27070 PF00034 Cytochrome c AS19_27080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS19_27090 PF01926 50S ribosome-binding GTPase AS19_27110 PF03334 Na+/H+ antiporter subunit AS19_27120 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AS19_27140 PF00361 Proton-conducting membrane transporter AS19_27150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AS19_27160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS19_27160 PF00361 Proton-conducting membrane transporter AS19_27160 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AS19_27160 PF13244 Domain of unknown function (DUF4040) AS19_27170 PF01367 5'-3' exonuclease, C-terminal SAM fold AS19_27170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS19_27170 PF00476 DNA polymerase family A AS19_27170 PF01612 3'-5' exonuclease AS19_27200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_27200 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_27200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_27230 PF00682 HMGL-like AS19_27240 PF13426 PAS domain AS19_27240 PF08447 PAS fold AS19_27240 PF00563 EAL domain AS19_27240 PF00990 Diguanylate cyclase, GGDEF domain AS19_27240 PF08448 PAS fold AS19_27240 PF05231 MASE1 AS19_27250 PF02325 YGGT family AS19_27260 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS19_27260 PF03807 NADP oxidoreductase coenzyme F420-dependent AS19_27270 PF01168 Alanine racemase, N-terminal domain AS19_27280 PF00437 Type II/IV secretion system protein AS19_27290 PF00437 Type II/IV secretion system protein AS19_27300 PF04102 SlyX AS19_27310 PF01169 Uncharacterized protein family UPF0016 AS19_27320 PF07152 YaeQ protein AS19_27350 PF03358 NADPH-dependent FMN reductase AS19_27360 PF01758 Sodium Bile acid symporter family AS19_27370 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS19_27380 PF01022 Bacterial regulatory protein, arsR family AS19_27390 PF01895 PhoU domain AS19_27400 PF00005 ABC transporter AS19_27410 PF00528 Binding-protein-dependent transport system inner membrane component AS19_27420 PF00528 Binding-protein-dependent transport system inner membrane component AS19_27450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AS19_27460 PF03061 Thioesterase superfamily AS19_27470 PF03480 Bacterial extracellular solute-binding protein, family 7 AS19_27480 PF00580 UvrD/REP helicase N-terminal domain AS19_27480 PF13361 UvrD-like helicase C-terminal domain AS19_27490 PF00563 EAL domain AS19_27490 PF00990 Diguanylate cyclase, GGDEF domain AS19_27490 PF03707 Bacterial signalling protein N terminal repeat AS19_27520 PF00924 Mechanosensitive ion channel AS19_27530 PF00561 alpha/beta hydrolase fold AS19_27530 PF00106 short chain dehydrogenase AS19_27560 PF13091 PLD-like domain AS19_27580 PF02872 5'-nucleotidase, C-terminal domain AS19_27580 PF00149 Calcineurin-like phosphoesterase AS19_27590 PF14743 DNA ligase OB-like domain AS19_27590 PF01068 ATP dependent DNA ligase domain AS19_27600 PF01641 SelR domain AS19_27600 PF01625 Peptide methionine sulfoxide reductase AS19_27610 PF05661 Protein of unknown function (DUF808) AS19_27630 PF00196 Bacterial regulatory proteins, luxR family AS19_27640 PF00487 Fatty acid desaturase AS19_27650 PF00301 Rubredoxin AS19_27660 PF00171 Aldehyde dehydrogenase family AS19_27670 PF05199 GMC oxidoreductase AS19_27670 PF00732 GMC oxidoreductase AS19_27810 PF04229 GrpB protein AS19_27830 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS19_27840 PF01730 UreF AS19_27850 PF01730 UreF AS19_27860 PF04955 HupE / UreJ protein AS19_27870 PF02814 UreE urease accessory protein, N-terminal domain AS19_27870 PF05194 UreE urease accessory protein, C-terminal domain AS19_27880 PF01979 Amidohydrolase family AS19_27880 PF00449 Urease alpha-subunit, N-terminal domain AS19_27890 PF00699 Urease beta subunit AS19_27900 PF00547 Urease, gamma subunit AS19_27910 PF01774 UreD urease accessory protein AS19_27920 PF01380 SIS domain AS19_27930 PF14602 Hexapeptide repeat of succinyl-transferase AS19_27930 PF12804 MobA-like NTP transferase domain AS19_27930 PF00132 Bacterial transferase hexapeptide (six repeats) AS19_27940 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AS19_27940 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AS19_27950 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS19_27950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS19_27960 PF00231 ATP synthase AS19_27970 PF00306 ATP synthase alpha/beta chain, C terminal domain AS19_27970 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS19_27970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS19_27980 PF00213 ATP synthase delta (OSCP) subunit AS19_27990 PF00430 ATP synthase B/B' CF(0) AS19_28000 PF00137 ATP synthase subunit C AS19_28010 PF00119 ATP synthase A chain AS19_28030 PF17762 HTH domain found in ParB protein AS19_28030 PF02195 ParB-like nuclease domain AS19_28040 PF13614 AAA domain AS19_28050 PF02527 rRNA small subunit methyltransferase G AS19_28060 PF13932 GidA associated domain AS19_28060 PF01134 Glucose inhibited division protein A AS19_28070 PF00999 Sodium/hydrogen exchanger family AS19_28070 PF02080 TrkA-C domain AS19_28070 PF03471 Transporter associated domain AS19_28080 PF02770 Acyl-CoA dehydrogenase, middle domain AS19_28080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS19_28080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS19_28080 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS19_28100 PF00463 Isocitrate lyase family AS19_28110 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AS19_28110 PF06974 Protein of unknown function (DUF1298) AS19_28120 PF01263 Aldose 1-epimerase AS19_28130 PF00313 'Cold-shock' DNA-binding domain AS19_28150 PF00873 AcrB/AcrD/AcrF family AS19_28160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS19_28170 PF00501 AMP-binding enzyme AS19_28170 PF13193 AMP-binding enzyme C-terminal domain AS19_28180 PF00206 Lyase AS19_28180 PF10415 Fumarase C C-terminus AS19_28190 PF00440 Bacterial regulatory proteins, tetR family AS19_28210 PF12631 MnmE helical domain AS19_28210 PF01926 50S ribosome-binding GTPase AS19_28210 PF10396 GTP-binding protein TrmE N-terminus AS19_28220 PF14849 YidC periplasmic domain AS19_28220 PF02096 60Kd inner membrane protein AS19_28240 PF00468 Ribosomal protein L34