P40_00005 SM00382 ATPases associated with a variety of cellular activities P40_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain P40_00010 SM00480 DNA polymerase III beta subunit P40_00020 SM00387 Histidine kinase-like ATPases P40_00020 SM00433 TopoisomeraseII P40_00025 SM00528 Domain in histone-like proteins of HNS family P40_00030 SM00563 Phosphate acyltransferases P40_00040 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_00040 SM00895 P40_00040 P40_00065 SM00382 ATPases associated with a variety of cellular activities P40_00070 SM00836 DALR anticodon binding domain P40_00105 SM00563 Phosphate acyltransferases P40_00165 SM00342 helix_turn_helix, arabinose operon control protein P40_00175 SM00764 Citrate lyase ligase C-terminal domain P40_00185 SM00422 helix_turn_helix, mercury resistance P40_00210 SM00346 helix_turn_helix isocitrate lyase regulation P40_00225 SM00882 Coenzyme A transferase P40_00230 SM00882 Coenzyme A transferase P40_00245 SM00244 prohibitin homologues P40_00265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor P40_00325 SM00073 Histidine Phosphotransfer domain P40_00325 SM00260 Two component signalling adaptor domain P40_00325 SM00387 Histidine kinase-like ATPases P40_00325 SM00448 cheY-homologous receiver domain P40_00325 SM01231 P40_00325 P40_00330 SM00138 Methyltransferase, chemotaxis proteins P40_00335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). P40_00340 SM00260 Two component signalling adaptor domain P40_00345 SM00448 cheY-homologous receiver domain P40_00350 SM00448 cheY-homologous receiver domain P40_00370 SM00732 Likely ribonuclease with RNase H fold. P40_00405 SM00448 cheY-homologous receiver domain P40_00405 SM00862 Transcriptional regulatory protein, C terminal P40_00410 SM00387 Histidine kinase-like ATPases P40_00410 SM00388 His Kinase A (phosphoacceptor) domain P40_00440 SM00382 ATPases associated with a variety of cellular activities P40_00445 SM00382 ATPases associated with a variety of cellular activities P40_00495 SM00855 Phosphoglycerate mutase family P40_00510 SM00327 von Willebrand factor (vWF) type A domain P40_00510 SM00609 Vault protein Inter-alpha-Trypsin domain P40_00515 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_00515 SM00895 P40_00515 P40_00580 SM00387 Histidine kinase-like ATPases P40_00580 SM00388 His Kinase A (phosphoacceptor) domain P40_00585 SM00448 cheY-homologous receiver domain P40_00585 SM00862 Transcriptional regulatory protein, C terminal P40_00755 SM00487 DEAD-like helicases superfamily P40_00755 SM00490 helicase superfamily c-terminal domain P40_00770 SM01001 AIR carboxylase P40_00810 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. P40_00810 SM00954 Region found in RelA / SpoT proteins P40_00815 SM01409 P40_00815 P40_00820 SM00072 Guanylate kinase homologues. P40_00830 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_00960 SM00858 P40_00960 P40_00975 SM00382 ATPases associated with a variety of cellular activities P40_01010 SM00346 helix_turn_helix isocitrate lyase regulation P40_01025 SM00829 Enoylreductase P40_01065 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain P40_01065 SM01232 P40_01065 P40_01095 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_01155 SM00382 ATPases associated with a variety of cellular activities P40_01160 SM00382 ATPases associated with a variety of cellular activities P40_01160 SM00962 SRP54-type protein, GTPase domain P40_01160 SM00963 SRP54-type protein, helical bundle domain P40_01235 SM00829 Enoylreductase P40_01255 SM00996 S-adenosyl-L-homocysteine hydrolase P40_01255 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain P40_01265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor P40_01275 SM00861 Transketolase, pyrimidine binding domain P40_01280 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain P40_01360 SM01011 Aminopeptidase P, N-terminal domain P40_01420 SM00507 HNH nucleases P40_01460 SM00829 Enoylreductase P40_01505 SM00342 helix_turn_helix, arabinose operon control protein P40_01530 SM00965 Secretin and TonB N terminus short domain P40_01575 SM00829 Enoylreductase P40_01680 SM00346 helix_turn_helix isocitrate lyase regulation P40_01715 SM00257 Lysin motif P40_01780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. P40_01810 SM00155 Phospholipase D. Active site motifs. P40_01840 SM00346 helix_turn_helix isocitrate lyase regulation P40_01885 SM00849 Metallo-beta-lactamase superfamily P40_01935 SM00387 Histidine kinase-like ATPases P40_01940 SM00448 cheY-homologous receiver domain P40_01940 SM00862 Transcriptional regulatory protein, C terminal P40_01995 SM00829 Enoylreductase P40_02035 SM00331 Sigma factor PP2C-like phosphatases P40_02035 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain P40_02065 SM00342 helix_turn_helix, arabinose operon control protein P40_02065 SM00478 endonuclease III P40_02065 SM01009 AlkA N-terminal domain P40_02090 SM00487 DEAD-like helicases superfamily P40_02090 SM00490 helicase superfamily c-terminal domain P40_02145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. P40_02210 SM00382 ATPases associated with a variety of cellular activities P40_02250 SM00342 helix_turn_helix, arabinose operon control protein P40_02270 SM00878 Biotin carboxylase C-terminal domain P40_02325 SM00316 Ribosomal protein S1-like RNA-binding domain P40_02325 SM00732 Likely ribonuclease with RNase H fold. P40_02330 SM00448 cheY-homologous receiver domain P40_02335 SM00448 cheY-homologous receiver domain P40_02335 SM00862 Transcriptional regulatory protein, C terminal P40_02340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_02340 SM00387 Histidine kinase-like ATPases P40_02340 SM00388 His Kinase A (phosphoacceptor) domain P40_02365 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_02385 SM00822 P40_02385 P40_02430 SM00965 Secretin and TonB N terminus short domain P40_02435 SM00564 beta-propeller repeat P40_02510 SM00342 helix_turn_helix, arabinose operon control protein P40_02525 SM00363 S4 RNA-binding domain P40_02535 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_02565 SM00100 Cyclic nucleotide-monophosphate binding domain P40_02565 SM00419 helix_turn_helix, cAMP Regulatory protein P40_02580 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_02610 SM00382 ATPases associated with a variety of cellular activities P40_02615 SM00382 ATPases associated with a variety of cellular activities P40_02625 SM00878 Biotin carboxylase C-terminal domain P40_02690 SM00880 P40_02690 P40_02770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain P40_02780 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_02795 SM00852 Probable molybdopterin binding domain P40_02800 SM00852 Probable molybdopterin binding domain P40_02805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P40_02805 SM00245 tail specific protease P40_02815 SM00450 Rhodanese Homology Domain P40_02875 SM01230 P40_02875 P40_02890 SM00387 Histidine kinase-like ATPases P40_02890 SM00388 His Kinase A (phosphoacceptor) domain P40_02895 SM00382 ATPases associated with a variety of cellular activities P40_02895 SM00448 cheY-homologous receiver domain P40_02980 SM00382 ATPases associated with a variety of cellular activities P40_03060 SM00342 helix_turn_helix, arabinose operon control protein P40_03130 SM00829 Enoylreductase P40_03160 SM00421 helix_turn_helix, Lux Regulon P40_03180 SM00387 Histidine kinase-like ATPases P40_03180 SM00433 TopoisomeraseII P40_03185 SM00434 DNA Topoisomerase IV P40_03190 SM00563 Phosphate acyltransferases P40_03205 SM00342 helix_turn_helix, arabinose operon control protein P40_03215 SM01130 P40_03215 P40_03240 SM00841 Elongation factor P, C-terminal P40_03240 SM01185 P40_03240 P40_03255 SM00052 Putative diguanylate phosphodiesterase P40_03255 SM00267 diguanylate cyclase P40_03260 SM00382 ATPases associated with a variety of cellular activities P40_03290 SM00382 ATPases associated with a variety of cellular activities P40_03350 SM01329 P40_03350 P40_03360 SM00342 helix_turn_helix, arabinose operon control protein P40_03385 SM00903 Flavin reductase like domain P40_03395 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_03405 SM00342 helix_turn_helix, arabinose operon control protein P40_03450 SM00382 ATPases associated with a variety of cellular activities P40_03455 SM00382 ATPases associated with a variety of cellular activities P40_03475 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_03475 SM00895 P40_03475 P40_03480 SM00796 Allophanate hydrolase subunit 1 P40_03480 SM00797 Allophanate hydrolase subunit 2 P40_03480 SM00878 Biotin carboxylase C-terminal domain P40_03525 SM00382 ATPases associated with a variety of cellular activities P40_03560 SM00478 endonuclease III P40_03570 SM00387 Histidine kinase-like ATPases P40_03580 SM00450 Rhodanese Homology Domain P40_03590 SM00479 P40_03590 P40_03620 SM00257 Lysin motif P40_03620 SM00646 P40_03620 P40_03625 SM00853 MutL C terminal dimerisation domain P40_03625 SM01340 P40_03625 P40_03645 SM00244 prohibitin homologues P40_03650 SM00244 prohibitin homologues P40_03665 SM00788 Adenylosuccinate synthetase P40_03680 SM00098 Alkaline phosphatase homologues P40_03685 SM00098 Alkaline phosphatase homologues P40_03710 SM00316 Ribosomal protein S1-like RNA-binding domain P40_03710 SM00357 Cold shock protein domain P40_03710 SM00955 P40_03710 P40_03715 SM00967 RNA 2'-O ribose methyltransferase substrate binding P40_03740 SM00382 ATPases associated with a variety of cellular activities P40_03745 SM01005 Alanine racemase, C-terminal domain P40_03750 SM00382 ATPases associated with a variety of cellular activities P40_03795 SM00421 helix_turn_helix, Lux Regulon P40_03815 SM00382 ATPases associated with a variety of cellular activities P40_03820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). P40_03820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_03915 SM00507 HNH nucleases P40_03960 SM00382 ATPases associated with a variety of cellular activities P40_03965 SM00382 ATPases associated with a variety of cellular activities P40_04015 SM00421 helix_turn_helix, Lux Regulon P40_04015 SM00448 cheY-homologous receiver domain P40_04080 SM00861 Transketolase, pyrimidine binding domain P40_04105 SM00448 cheY-homologous receiver domain P40_04105 SM00862 Transcriptional regulatory protein, C terminal P40_04135 SM00387 Histidine kinase-like ATPases P40_04135 SM00388 His Kinase A (phosphoacceptor) domain P40_04135 SM01080 P40_04135 P40_04150 SM00100 Cyclic nucleotide-monophosphate binding domain P40_04150 SM00116 Domain in cystathionine beta-synthase and other proteins. P40_04155 SM00479 P40_04155 P40_04165 SM00091 PAS domain P40_04165 SM00387 Histidine kinase-like ATPases P40_04165 SM00388 His Kinase A (phosphoacceptor) domain P40_04165 SM00448 cheY-homologous receiver domain P40_04170 SM00421 helix_turn_helix, Lux Regulon P40_04170 SM00448 cheY-homologous receiver domain P40_04190 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_04200 SM00028 Tetratricopeptide repeats P40_04235 SM00840 P40_04235 P40_04245 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain P40_04250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. P40_04250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. P40_04255 SM00267 diguanylate cyclase P40_04310 SM00822 P40_04310 P40_04325 SM00342 helix_turn_helix, arabinose operon control protein P40_04335 SM00769 Water Stress and Hypersensitive response P40_04340 SM00506 Appr-1"-p processing enzyme P40_04395 SM00560 LamG-like jellyroll fold domain P40_04445 SM00965 Secretin and TonB N terminus short domain P40_04450 SM00912 haemagglutination activity domain P40_04465 SM00421 helix_turn_helix, Lux Regulon P40_04505 SM00822 P40_04505 P40_04565 SM00342 helix_turn_helix, arabinose operon control protein P40_04585 SM00400 zinc finger P40_04585 SM00493 P40_04585 P40_04605 SM01207 P40_04605 P40_04610 SM00905 Dihydroneopterin aldolase P40_04650 SM00763 PrkA AAA domain P40_04665 SM00650 Ribosomal RNA adenine dimethylases P40_04750 SM00387 Histidine kinase-like ATPases P40_04755 SM00448 cheY-homologous receiver domain P40_04780 SM00100 Cyclic nucleotide-monophosphate binding domain P40_04780 SM00419 helix_turn_helix, cAMP Regulatory protein P40_04800 SM00388 His Kinase A (phosphoacceptor) domain P40_04800 SM00448 cheY-homologous receiver domain P40_04805 SM00100 Cyclic nucleotide-monophosphate binding domain P40_04805 SM00450 Rhodanese Homology Domain P40_04815 SM01209 P40_04815 P40_04815 SM01210 P40_04815 P40_04820 SM00798 AICARFT/IMPCHase bienzyme P40_04820 SM00851 MGS-like domain P40_04855 SM00878 Biotin carboxylase C-terminal domain P40_04895 SM00342 helix_turn_helix, arabinose operon control protein P40_04900 SM00448 cheY-homologous receiver domain P40_04900 SM00862 Transcriptional regulatory protein, C terminal P40_04905 SM00387 Histidine kinase-like ATPases P40_04905 SM00388 His Kinase A (phosphoacceptor) domain P40_04915 SM00822 P40_04915 P40_04920 SM01236 P40_04920 P40_04960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor P40_05060 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_05065 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_05085 SM00936 Penicillin-binding protein 5, C-terminal domain P40_05170 SM00849 Metallo-beta-lactamase superfamily P40_05185 SM01116 P40_05185 P40_05190 SM00116 Domain in cystathionine beta-synthase and other proteins. P40_05190 SM01091 Transporter associated domain P40_05205 SM00382 ATPases associated with a variety of cellular activities P40_05230 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_05275 SM00670 Large family of predicted nucleotide-binding domains P40_05290 SM00450 Rhodanese Homology Domain P40_05295 SM00487 DEAD-like helicases superfamily P40_05295 SM00490 helicase superfamily c-terminal domain P40_05305 SM00822 P40_05305 P40_05310 SM00563 Phosphate acyltransferases P40_05330 SM00357 Cold shock protein domain P40_05380 SM00363 S4 RNA-binding domain P40_05430 SM00487 DEAD-like helicases superfamily P40_05430 SM00490 helicase superfamily c-terminal domain P40_05435 SM00530 Helix-turn-helix XRE-family like proteins P40_05460 SM00028 Tetratricopeptide repeats P40_05470 SM00100 Cyclic nucleotide-monophosphate binding domain P40_05470 SM00419 helix_turn_helix, cAMP Regulatory protein P40_05480 SM00382 ATPases associated with a variety of cellular activities P40_05500 SM00382 ATPases associated with a variety of cellular activities P40_05510 SM00382 ATPases associated with a variety of cellular activities P40_05520 SM00822 P40_05520 P40_05525 SM00796 Allophanate hydrolase subunit 1 P40_05525 SM00797 Allophanate hydrolase subunit 2 P40_05525 SM00878 Biotin carboxylase C-terminal domain P40_05540 SM00382 ATPases associated with a variety of cellular activities P40_05595 SM00530 Helix-turn-helix XRE-family like proteins P40_05620 SM00530 Helix-turn-helix XRE-family like proteins P40_05680 SM00382 ATPases associated with a variety of cellular activities P40_05690 SM00562 P40_05690 P40_05700 SM00028 Tetratricopeptide repeats P40_05705 SM00530 Helix-turn-helix XRE-family like proteins P40_05725 SM00564 beta-propeller repeat P40_05745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_05745 SM00387 Histidine kinase-like ATPases P40_05745 SM00388 His Kinase A (phosphoacceptor) domain P40_05745 SM00448 cheY-homologous receiver domain P40_05755 SM00116 Domain in cystathionine beta-synthase and other proteins. P40_05755 SM01240 P40_05755 P40_05765 SM00422 helix_turn_helix, mercury resistance P40_05825 SM00342 helix_turn_helix, arabinose operon control protein P40_05860 SM00966 SpoVT / AbrB like domain P40_05955 SM00530 Helix-turn-helix XRE-family like proteins P40_05965 SM00671 Sel1-like repeats. P40_05995 SM00342 helix_turn_helix, arabinose operon control protein P40_06035 SM00014 Acid phosphatase homologues P40_06065 SM00342 helix_turn_helix, arabinose operon control protein P40_06090 SM00530 Helix-turn-helix XRE-family like proteins P40_06100 SM00342 helix_turn_helix, arabinose operon control protein P40_06195 SM00342 helix_turn_helix, arabinose operon control protein P40_06205 SM00342 helix_turn_helix, arabinose operon control protein P40_06245 SM00460 Transglutaminase/protease-like homologues P40_06270 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_06280 SM00564 beta-propeller repeat P40_06320 SM00342 helix_turn_helix, arabinose operon control protein P40_06335 SM00530 Helix-turn-helix XRE-family like proteins P40_06365 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_06375 SM00822 P40_06375 P40_06400 SM00382 ATPases associated with a variety of cellular activities P40_06420 SM00990 P40_06420 P40_06425 SM00488 P40_06425 P40_06425 SM00491 P40_06425 P40_06510 SM00062 Bacterial periplasmic substrate-binding proteins P40_06515 SM01211 P40_06515 P40_06555 SM01091 Transporter associated domain P40_06565 SM00382 ATPases associated with a variety of cellular activities P40_06565 SM00962 SRP54-type protein, GTPase domain P40_06565 SM00963 SRP54-type protein, helical bundle domain P40_06660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P40_06680 SM00507 HNH nucleases P40_06685 SM01359 P40_06685 P40_06685 SM01360 P40_06685 P40_06695 SM00422 helix_turn_helix, mercury resistance P40_06715 SM00382 ATPases associated with a variety of cellular activities P40_06730 SM00028 Tetratricopeptide repeats P40_06745 SM00450 Rhodanese Homology Domain P40_06770 SM00342 helix_turn_helix, arabinose operon control protein P40_06785 SM00822 P40_06785 P40_06810 SM00448 cheY-homologous receiver domain P40_06810 SM00862 Transcriptional regulatory protein, C terminal P40_06815 SM00387 Histidine kinase-like ATPases P40_06850 SM00267 diguanylate cyclase P40_06865 SM00342 helix_turn_helix, arabinose operon control protein P40_06895 SM00487 DEAD-like helicases superfamily P40_06895 SM00490 helicase superfamily c-terminal domain P40_06915 SM00448 cheY-homologous receiver domain P40_06915 SM00862 Transcriptional regulatory protein, C terminal P40_06920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_06920 SM00387 Histidine kinase-like ATPases P40_06920 SM00388 His Kinase A (phosphoacceptor) domain P40_06970 SM00382 ATPases associated with a variety of cellular activities P40_07040 SM00937 P40_07040 P40_07055 SM00986 Uracil DNA glycosylase superfamily P40_07055 SM00987 UreE urease accessory protein, C-terminal domain P40_07110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P40_07130 SM00358 Double-stranded RNA binding motif P40_07130 SM00535 Ribonuclease III family P40_07160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_07160 SM00387 Histidine kinase-like ATPases P40_07160 SM00388 His Kinase A (phosphoacceptor) domain P40_07160 SM00448 cheY-homologous receiver domain P40_07180 SM00954 Region found in RelA / SpoT proteins P40_07195 SM00422 helix_turn_helix, mercury resistance P40_07220 SM00825 Beta-ketoacyl synthase P40_07245 SM00028 Tetratricopeptide repeats P40_07305 SM00382 ATPases associated with a variety of cellular activities P40_07310 SM00448 cheY-homologous receiver domain P40_07310 SM01012 P40_07310 P40_07335 SM01118 P40_07335 P40_07340 SM00382 ATPases associated with a variety of cellular activities P40_07410 SM00822 P40_07410 P40_07445 SM00382 ATPases associated with a variety of cellular activities P40_07475 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain P40_07505 SM00530 Helix-turn-helix XRE-family like proteins P40_07575 SM00382 ATPases associated with a variety of cellular activities P40_07580 SM00382 ATPases associated with a variety of cellular activities P40_07605 SM00822 P40_07605 P40_07635 SM00855 Phosphoglycerate mutase family P40_07660 SM00822 P40_07660 P40_07675 SM00091 PAS domain P40_07690 SM00346 helix_turn_helix isocitrate lyase regulation P40_07700 SM00421 helix_turn_helix, Lux Regulon P40_07700 SM00448 cheY-homologous receiver domain P40_07705 SM00897 FIST N domain P40_07705 SM01204 P40_07705 P40_07710 SM00387 Histidine kinase-like ATPases P40_07710 SM00388 His Kinase A (phosphoacceptor) domain P40_07710 SM00448 cheY-homologous receiver domain P40_07725 SM00564 beta-propeller repeat P40_07740 SM00849 Metallo-beta-lactamase superfamily P40_07780 SM00822 P40_07780 P40_07810 SM00382 ATPases associated with a variety of cellular activities P40_07815 SM00382 ATPases associated with a variety of cellular activities P40_07840 SM00829 Enoylreductase P40_07875 SM00966 SpoVT / AbrB like domain P40_07885 SM00919 Malic enzyme, NAD binding domain P40_07885 SM01274 P40_07885 P40_07890 SM01007 Class II Aldolase and Adducin N-terminal domain P40_07895 SM00829 Enoylreductase P40_07900 SM00849 Metallo-beta-lactamase superfamily P40_07915 SM00346 helix_turn_helix isocitrate lyase regulation P40_07920 SM00881 CoA binding domain P40_07945 SM00822 P40_07945 P40_07965 SM00530 Helix-turn-helix XRE-family like proteins P40_07990 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_08015 SM00342 helix_turn_helix, arabinose operon control protein P40_08020 SM00829 Enoylreductase P40_08045 SM00226 Low molecular weight phosphatase family P40_08065 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. P40_08095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. P40_08105 SM00849 Metallo-beta-lactamase superfamily P40_08105 SM01027 Beta-Casp domain P40_08135 SM00984 UDP binding domain P40_08150 SM00984 UDP binding domain P40_08310 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_08335 SM00487 DEAD-like helicases superfamily P40_08335 SM00490 helicase superfamily c-terminal domain P40_08400 SM00968 SMC proteins Flexible Hinge Domain P40_08405 SM00771 ZipA, C-terminal domain (FtsZ-binding) P40_08410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 P40_08410 SM00292 breast cancer carboxy-terminal domain P40_08410 SM00532 Ligase N family P40_08445 SM00387 Histidine kinase-like ATPases P40_08445 SM00388 His Kinase A (phosphoacceptor) domain P40_08445 SM00448 cheY-homologous receiver domain P40_08540 SM00878 Biotin carboxylase C-terminal domain P40_08560 SM00822 P40_08560 P40_08595 SM00100 Cyclic nucleotide-monophosphate binding domain P40_08595 SM00450 Rhodanese Homology Domain P40_08670 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain P40_08670 SM00437 Bacterial DNA topoisomerase I DNA-binding domain P40_08670 SM00493 P40_08670 P40_08730 SM00861 Transketolase, pyrimidine binding domain P40_08740 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase P40_08755 SM00487 DEAD-like helicases superfamily P40_08755 SM00490 helicase superfamily c-terminal domain P40_08755 SM00982 P40_08755 P40_08755 SM01058 CarD-like/TRCF domain P40_08765 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain P40_08780 SM00900 P40_08780 P40_08885 SM00382 ATPases associated with a variety of cellular activities P40_08900 SM00382 ATPases associated with a variety of cellular activities P40_09000 SM00382 ATPases associated with a variety of cellular activities P40_09005 SM00382 ATPases associated with a variety of cellular activities P40_09050 SM00530 Helix-turn-helix XRE-family like proteins P40_09080 SM00487 DEAD-like helicases superfamily P40_09080 SM00491 P40_09080 P40_09105 SM00563 Phosphate acyltransferases P40_09145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. P40_09190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P40_09200 SM00935 Outer membrane protein (OmpH-like) P40_09230 SM00481 DNA polymerase alpha chain like domain P40_09240 SM00977 TilS substrate C-terminal domain P40_09255 SM01192 P40_09255 P40_09255 SM01193 P40_09255 P40_09290 SM00257 Lysin motif P40_09310 SM00342 helix_turn_helix, arabinose operon control protein P40_09330 SM00822 P40_09330 P40_09395 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. P40_09425 SM01329 P40_09425 P40_09430 SM00357 Cold shock protein domain P40_09440 SM00382 ATPases associated with a variety of cellular activities P40_09440 SM01086 C-terminal, D2-small domain, of ClpB protein P40_09445 SM00316 Ribosomal protein S1-like RNA-binding domain P40_09475 SM00843 P40_09475 P40_09485 SM00382 ATPases associated with a variety of cellular activities P40_09545 SM00382 ATPases associated with a variety of cellular activities P40_09560 SM00342 helix_turn_helix, arabinose operon control protein P40_09610 SM00530 Helix-turn-helix XRE-family like proteins P40_09655 SM00342 helix_turn_helix, arabinose operon control protein P40_09690 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_09690 SM00895 P40_09690 P40_09725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 P40_09725 SM00465 GIY-YIG type nucleases (URI domain) P40_09815 SM00822 P40_09815 P40_09865 SM00822 P40_09865 P40_09920 SM00342 helix_turn_helix, arabinose operon control protein P40_10010 SM00487 DEAD-like helicases superfamily P40_10255 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain P40_10255 SM00437 Bacterial DNA topoisomerase I DNA-binding domain P40_10255 SM00493 P40_10255 P40_10300 SM00966 SpoVT / AbrB like domain P40_10355 SM00530 Helix-turn-helix XRE-family like proteins P40_10360 SM00382 ATPases associated with a variety of cellular activities P40_10365 SM00382 ATPases associated with a variety of cellular activities P40_10410 SM00829 Enoylreductase P40_10415 SM00878 Biotin carboxylase C-terminal domain P40_10430 SM00342 helix_turn_helix, arabinose operon control protein P40_10455 SM00342 helix_turn_helix, arabinose operon control protein P40_10580 SM00382 ATPases associated with a variety of cellular activities P40_10580 SM01086 C-terminal, D2-small domain, of ClpB protein P40_10625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. P40_10625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_10625 SM00387 Histidine kinase-like ATPases P40_10625 SM00388 His Kinase A (phosphoacceptor) domain P40_10625 SM00448 cheY-homologous receiver domain P40_10630 SM00138 Methyltransferase, chemotaxis proteins P40_10635 SM00448 cheY-homologous receiver domain P40_10645 SM00091 PAS domain P40_10645 SM00448 cheY-homologous receiver domain P40_10650 SM00382 ATPases associated with a variety of cellular activities P40_10705 SM01018 B12 binding domain P40_10735 SM01007 Class II Aldolase and Adducin N-terminal domain P40_10805 SM00829 Enoylreductase P40_10870 SM00382 ATPases associated with a variety of cellular activities P40_10870 SM00464 Found in ATP-dependent protease La (LON) P40_10890 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_10930 SM01002 Alanine dehydrogenase/PNT, C-terminal domain P40_10930 SM01003 Alanine dehydrogenase/PNT, N-terminal domain P40_10945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P40_10945 SM00245 tail specific protease P40_10965 SM00849 Metallo-beta-lactamase superfamily P40_10985 SM00100 Cyclic nucleotide-monophosphate binding domain P40_10985 SM00419 helix_turn_helix, cAMP Regulatory protein P40_10990 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_11040 SM00422 helix_turn_helix, mercury resistance P40_11095 SM00244 prohibitin homologues P40_11110 SM00382 ATPases associated with a variety of cellular activities P40_11120 SM00363 S4 RNA-binding domain P40_11145 SM00481 DNA polymerase alpha chain like domain P40_11160 SM00287 Bacterial SH3 domain homologues P40_11175 SM00563 Phosphate acyltransferases P40_11195 SM00382 ATPases associated with a variety of cellular activities P40_11215 SM00422 helix_turn_helix, mercury resistance P40_11350 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_11350 SM00895 P40_11350 P40_11365 SM00479 P40_11365 P40_11380 SM00849 Metallo-beta-lactamase superfamily P40_11385 SM00257 Lysin motif P40_11405 SM00382 ATPases associated with a variety of cellular activities P40_11430 SM00411 bacterial (prokaryotic) histone like domain P40_11435 SM00382 ATPases associated with a variety of cellular activities P40_11435 SM00464 Found in ATP-dependent protease La (LON) P40_11440 SM00382 ATPases associated with a variety of cellular activities P40_11440 SM00994 ClpX C4-type zinc finger P40_11440 SM01086 C-terminal, D2-small domain, of ClpB protein P40_11645 SM00881 CoA binding domain P40_11735 SM00563 Phosphate acyltransferases P40_11745 SM00487 DEAD-like helicases superfamily P40_11745 SM00490 helicase superfamily c-terminal domain P40_11745 SM00847 Helicase associated domain (HA2) Add an annotation P40_11785 SM00382 ATPases associated with a variety of cellular activities P40_11800 SM00450 Rhodanese Homology Domain P40_11825 SM00116 Domain in cystathionine beta-synthase and other proteins. P40_11840 SM00387 Histidine kinase-like ATPases P40_11840 SM00388 His Kinase A (phosphoacceptor) domain P40_11840 SM00448 cheY-homologous receiver domain P40_11845 SM00422 helix_turn_helix, mercury resistance P40_11865 SM00878 Biotin carboxylase C-terminal domain P40_11920 SM00481 DNA polymerase alpha chain like domain P40_12040 SM00829 Enoylreductase P40_12050 SM00487 DEAD-like helicases superfamily P40_12050 SM00490 helicase superfamily c-terminal domain P40_12050 SM00847 Helicase associated domain (HA2) Add an annotation P40_12055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P40_12065 SM00062 Bacterial periplasmic substrate-binding proteins P40_12120 SM00530 Helix-turn-helix XRE-family like proteins P40_12160 SM00448 cheY-homologous receiver domain P40_12165 SM00387 Histidine kinase-like ATPases P40_12165 SM00388 His Kinase A (phosphoacceptor) domain P40_12215 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_12215 SM00895 P40_12215 P40_12220 SM00917 LeuA allosteric (dimerisation) domain P40_12305 SM01321 P40_12305 P40_12375 SM00448 cheY-homologous receiver domain P40_12375 SM00862 Transcriptional regulatory protein, C terminal P40_12380 SM00387 Histidine kinase-like ATPases P40_12380 SM00388 His Kinase A (phosphoacceptor) domain P40_12420 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_12420 SM00895 P40_12420 P40_12510 SM01321 P40_12510 P40_12515 SM00849 Metallo-beta-lactamase superfamily P40_12545 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor P40_12545 SM00450 Rhodanese Homology Domain P40_12550 SM01321 P40_12550 P40_12620 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_12620 SM00895 P40_12620 P40_12645 SM00382 ATPases associated with a variety of cellular activities P40_12650 SM00382 ATPases associated with a variety of cellular activities P40_12680 SM00271 DnaJ molecular chaperone homology domain P40_12715 SM00267 diguanylate cyclase P40_12730 SM00460 Transglutaminase/protease-like homologues P40_12740 SM00382 ATPases associated with a variety of cellular activities P40_12800 SM00859 Semialdehyde dehydrogenase, NAD binding domain P40_12805 SM00859 Semialdehyde dehydrogenase, NAD binding domain P40_12810 SM01329 P40_12810 P40_12855 SM00822 P40_12855 P40_12895 SM00855 Phosphoglycerate mutase family P40_12905 SM00387 Histidine kinase-like ATPases P40_12950 SM00881 CoA binding domain P40_12970 SM00861 Transketolase, pyrimidine binding domain P40_13030 SM00953 P40_13030 P40_13045 SM00460 Transglutaminase/protease-like homologues P40_13060 SM00893 Electron transfer flavoprotein domain P40_13065 SM00893 Electron transfer flavoprotein domain P40_13145 SM00020 Trypsin-like serine protease P40_13185 SM00825 Beta-ketoacyl synthase P40_13190 SM00823 Phosphopantetheine attachment site P40_13195 SM00822 P40_13195 P40_13200 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. P40_13235 SM00363 S4 RNA-binding domain P40_13240 SM00316 Ribosomal protein S1-like RNA-binding domain P40_13255 SM00226 Low molecular weight phosphatase family P40_13270 SM00382 ATPases associated with a variety of cellular activities P40_13285 SM00849 Metallo-beta-lactamase superfamily P40_13360 SM00342 helix_turn_helix, arabinose operon control protein P40_13375 SM00382 ATPases associated with a variety of cellular activities P40_13420 SM00382 ATPases associated with a variety of cellular activities P40_13440 SM00965 Secretin and TonB N terminus short domain P40_13475 SM00849 Metallo-beta-lactamase superfamily P40_13490 SM00881 CoA binding domain P40_13505 SM00849 Metallo-beta-lactamase superfamily P40_13550 SM00463 Small MutS-related domain P40_13640 SM00450 Rhodanese Homology Domain P40_13645 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_13695 SM00822 P40_13695 P40_13700 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_13715 SM00387 Histidine kinase-like ATPases P40_13715 SM00388 His Kinase A (phosphoacceptor) domain P40_13715 SM00448 cheY-homologous receiver domain P40_13755 SM00900 P40_13755 P40_13775 SM00478 endonuclease III P40_13775 SM00525 P40_13775 P40_13780 SM00278 Helix-hairpin-helix DNA-binding motif class 1 P40_13785 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family P40_13800 SM00411 bacterial (prokaryotic) histone like domain P40_13805 SM00316 Ribosomal protein S1-like RNA-binding domain P40_13825 SM00830 Chorismate mutase type II P40_13835 SM00434 DNA Topoisomerase IV P40_13855 SM00822 P40_13855 P40_13925 SM00474 3'-5' exonuclease P40_13930 SM00855 Phosphoglycerate mutase family P40_13960 SM00493 P40_13960 P40_13970 SM00382 ATPases associated with a variety of cellular activities P40_13985 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. P40_14035 SM00382 ATPases associated with a variety of cellular activities P40_14045 SM00833 Cobalamin synthesis protein cobW C-terminal domain P40_14100 SM01007 Class II Aldolase and Adducin N-terminal domain P40_14125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) P40_14125 SM00091 PAS domain P40_14125 SM00387 Histidine kinase-like ATPases P40_14125 SM00388 His Kinase A (phosphoacceptor) domain P40_14130 SM00421 helix_turn_helix, Lux Regulon P40_14130 SM00448 cheY-homologous receiver domain P40_14200 SM00382 ATPases associated with a variety of cellular activities P40_14205 SM00382 ATPases associated with a variety of cellular activities P40_14245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain P40_14320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). P40_14320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_14325 SM00710 Parallel beta-helix repeats P40_14340 SM00860 SMI1 / KNR4 family P40_14365 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain P40_14385 SM00382 ATPases associated with a variety of cellular activities P40_14455 SM00965 Secretin and TonB N terminus short domain P40_14465 SM00859 Semialdehyde dehydrogenase, NAD binding domain P40_14495 SM00533 DNA-binding domain of DNA mismatch repair MUTS family P40_14495 SM00534 ATPase domain of DNA mismatch repair MUTS family P40_14505 SM00073 Histidine Phosphotransfer domain P40_14540 SM00155 Phospholipase D. Active site motifs. P40_14550 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_14695 SM00530 Helix-turn-helix XRE-family like proteins P40_14770 SM00422 helix_turn_helix, mercury resistance P40_14785 SM00746 metallochaperone-like domain P40_14815 SM00448 cheY-homologous receiver domain P40_14815 SM00862 Transcriptional regulatory protein, C terminal P40_14820 SM00387 Histidine kinase-like ATPases P40_14850 SM00530 Helix-turn-helix XRE-family like proteins P40_14885 SM00422 helix_turn_helix, mercury resistance P40_14940 SM00422 helix_turn_helix, mercury resistance P40_14945 SM00411 bacterial (prokaryotic) histone like domain P40_14950 SM00873 B3/4 domain P40_14950 SM00874 tRNA synthetase B5 domain P40_14950 SM00896 Ferredoxin-fold anticodon binding domain P40_14985 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_14985 SM00895 P40_14985 P40_15010 SM00849 Metallo-beta-lactamase superfamily P40_15020 SM01130 P40_15020 P40_15105 SM00382 ATPases associated with a variety of cellular activities P40_15110 SM00278 Helix-hairpin-helix DNA-binding motif class 1 P40_15130 SM00411 bacterial (prokaryotic) histone like domain P40_15140 SM00387 Histidine kinase-like ATPases P40_15145 SM00448 cheY-homologous receiver domain P40_15195 SM00341 Helicase and RNase D C-terminal P40_15195 SM00487 DEAD-like helicases superfamily P40_15195 SM00490 helicase superfamily c-terminal domain P40_15195 SM00956 P40_15195 P40_15210 SM00487 DEAD-like helicases superfamily P40_15210 SM00490 helicase superfamily c-terminal domain P40_15215 SM00822 P40_15215 P40_15225 SM00450 Rhodanese Homology Domain P40_15265 SM00479 P40_15265 P40_15310 SM00382 ATPases associated with a variety of cellular activities P40_15315 SM00267 diguanylate cyclase P40_15320 SM00267 diguanylate cyclase P40_15330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_15330 SM00387 Histidine kinase-like ATPases P40_15330 SM00388 His Kinase A (phosphoacceptor) domain P40_15335 SM00448 cheY-homologous receiver domain P40_15335 SM00862 Transcriptional regulatory protein, C terminal P40_15375 SM00342 helix_turn_helix, arabinose operon control protein P40_15410 SM00342 helix_turn_helix, arabinose operon control protein P40_15450 SM00849 Metallo-beta-lactamase superfamily P40_15460 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_15495 SM00382 ATPases associated with a variety of cellular activities P40_15500 SM00382 ATPases associated with a variety of cellular activities P40_15520 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) P40_15520 SM00091 PAS domain P40_15520 SM00421 helix_turn_helix, Lux Regulon P40_15585 SM00841 Elongation factor P, C-terminal P40_15585 SM01185 P40_15585 P40_15595 SM00563 Phosphate acyltransferases P40_15640 SM00382 ATPases associated with a variety of cellular activities P40_15670 SM00267 diguanylate cyclase P40_15675 SM00020 Trypsin-like serine protease P40_15700 SM00822 P40_15700 P40_15730 SM00342 helix_turn_helix, arabinose operon control protein P40_15750 SM00833 Cobalamin synthesis protein cobW C-terminal domain P40_15825 SM00825 Beta-ketoacyl synthase P40_15830 SM00564 beta-propeller repeat P40_15900 SM00382 ATPases associated with a variety of cellular activities P40_15900 SM00962 SRP54-type protein, GTPase domain P40_15920 SM00448 cheY-homologous receiver domain P40_15925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). P40_15925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_15930 SM00448 cheY-homologous receiver domain P40_15935 SM00138 Methyltransferase, chemotaxis proteins P40_15940 SM00091 PAS domain P40_15940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). P40_15945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). P40_15945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_15950 SM00260 Two component signalling adaptor domain P40_16045 SM00382 ATPases associated with a variety of cellular activities P40_16105 SM00047 Lysozyme subfamily 2 P40_16150 SM00858 P40_16150 P40_16190 SM00917 LeuA allosteric (dimerisation) domain P40_16215 SM00028 Tetratricopeptide repeats P40_16220 SM00387 Histidine kinase-like ATPases P40_16225 SM00421 helix_turn_helix, Lux Regulon P40_16225 SM00448 cheY-homologous receiver domain P40_16260 SM00883 Chaperonin 10 Kd subunit P40_16285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_16285 SM00387 Histidine kinase-like ATPases P40_16285 SM00388 His Kinase A (phosphoacceptor) domain P40_16290 SM00448 cheY-homologous receiver domain P40_16290 SM00862 Transcriptional regulatory protein, C terminal P40_16315 SM00644 P40_16315 P40_16400 SM00957 SecA DEAD-like domain P40_16400 SM00958 SecA preprotein cross-linking domain P40_16420 SM00864 Tubulin/FtsZ family, GTPase domain P40_16420 SM00865 Tubulin/FtsZ family, C-terminal domain P40_16425 SM00842 Cell division protein FtsA P40_16495 SM00849 Metallo-beta-lactamase superfamily P40_16520 SM00749 bacterial OsmY and nodulation domain P40_16600 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_16600 SM00895 P40_16600 P40_16620 SM00382 ATPases associated with a variety of cellular activities P40_16625 SM00382 ATPases associated with a variety of cellular activities P40_16725 SM00046 Diacylglycerol kinase catalytic domain (presumed) P40_16735 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P40_16780 SM00116 Domain in cystathionine beta-synthase and other proteins. P40_16800 SM00382 ATPases associated with a variety of cellular activities P40_16860 SM00100 Cyclic nucleotide-monophosphate binding domain P40_16910 SM00845 GatB domain P40_17015 SM00100 Cyclic nucleotide-monophosphate binding domain P40_17020 SM00387 Histidine kinase-like ATPases P40_17020 SM00388 His Kinase A (phosphoacceptor) domain P40_17020 SM00448 cheY-homologous receiver domain P40_17025 SM00421 helix_turn_helix, Lux Regulon P40_17025 SM00448 cheY-homologous receiver domain P40_17050 SM00937 P40_17050 P40_17060 SM00028 Tetratricopeptide repeats P40_17080 SM01400 P40_17080 P40_17115 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain P40_17160 SM00671 Sel1-like repeats. P40_17210 SM01329 P40_17210 P40_17245 SM01323 P40_17245 P40_17320 SM00966 SpoVT / AbrB like domain P40_17495 SM00382 ATPases associated with a variety of cellular activities P40_17625 SM00487 DEAD-like helicases superfamily P40_17735 SM00046 Diacylglycerol kinase catalytic domain (presumed) P40_17820 SM00382 ATPases associated with a variety of cellular activities P40_17820 SM01086 C-terminal, D2-small domain, of ClpB protein P40_17830 SM00363 S4 RNA-binding domain P40_17850 SM00387 Histidine kinase-like ATPases P40_17850 SM00388 His Kinase A (phosphoacceptor) domain P40_17855 SM00382 ATPases associated with a variety of cellular activities P40_17855 SM00448 cheY-homologous receiver domain P40_17920 SM00904 Riboflavin kinase P40_17935 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase P40_17985 SM00342 helix_turn_helix, arabinose operon control protein P40_18025 SM00382 ATPases associated with a variety of cellular activities P40_18040 SM00822 P40_18040 P40_18050 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain P40_18050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_18085 SM00421 helix_turn_helix, Lux Regulon P40_18105 SM00871 Bacterial transcription activator, effector binding domain P40_18130 SM00662 RNA polymerases D P40_18135 SM00363 S4 RNA-binding domain P40_18135 SM01390 P40_18135 P40_18200 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. P40_18205 SM01374 P40_18205 P40_18225 SM00322 K homology RNA-binding domain P40_18240 SM01382 P40_18240 P40_18240 SM01383 P40_18240 P40_18260 SM01403 P40_18260 P40_18270 SM00838 Elongation factor G C-terminus P40_18270 SM00889 Elongation factor G, domain IV P40_18285 SM00663 RNA polymerase I subunit A N-terminus P40_18310 SM00649 Ribosomal protein L11/L12 P40_18315 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. P40_18315 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. P40_18415 SM00014 Acid phosphatase homologues P40_18465 SM00028 Tetratricopeptide repeats P40_18520 SM00091 PAS domain P40_18520 SM00387 Histidine kinase-like ATPases P40_18520 SM00388 His Kinase A (phosphoacceptor) domain P40_18525 SM00382 ATPases associated with a variety of cellular activities P40_18525 SM00448 cheY-homologous receiver domain P40_18580 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_18620 SM00342 helix_turn_helix, arabinose operon control protein P40_18625 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_18625 SM00895 P40_18625 P40_18645 SM00316 Ribosomal protein S1-like RNA-binding domain P40_18645 SM00322 K homology RNA-binding domain P40_18650 SM01387 P40_18650 P40_18670 SM00316 Ribosomal protein S1-like RNA-binding domain P40_18670 SM00322 K homology RNA-binding domain P40_18710 SM00382 ATPases associated with a variety of cellular activities P40_18720 SM01103 P40_18720 P40_18730 SM00851 MGS-like domain P40_18730 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain P40_18735 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain P40_18745 SM00271 DnaJ molecular chaperone homology domain P40_18870 SM00382 ATPases associated with a variety of cellular activities P40_18940 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_18940 SM00895 P40_18940 P40_18965 SM00382 ATPases associated with a variety of cellular activities P40_18970 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain P40_19060 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_19060 SM00895 P40_19060 P40_19090 SM00382 ATPases associated with a variety of cellular activities P40_19140 SM00917 LeuA allosteric (dimerisation) domain P40_19145 SM00344 helix_turn_helix ASNC type P40_19180 SM00822 P40_19180 P40_19195 SM00382 ATPases associated with a variety of cellular activities P40_19200 SM00382 ATPases associated with a variety of cellular activities P40_19260 SM00729 Elongator protein 3, MiaB family, Radical SAM P40_19260 SM00876 Biotin and Thiamin Synthesis associated domain P40_19305 SM00382 ATPases associated with a variety of cellular activities P40_19320 SM00965 Secretin and TonB N terminus short domain P40_19360 SM00919 Malic enzyme, NAD binding domain P40_19360 SM01274 P40_19360 P40_19370 SM00487 DEAD-like helicases superfamily P40_19370 SM00490 helicase superfamily c-terminal domain P40_19385 SM00836 DALR anticodon binding domain P40_19385 SM01016 Arginyl tRNA synthetase N terminal dom P40_19400 SM00382 ATPases associated with a variety of cellular activities P40_19400 SM01086 C-terminal, D2-small domain, of ClpB protein P40_19460 SM00448 cheY-homologous receiver domain P40_19460 SM00850 LytTr DNA-binding domain P40_19500 SM00965 Secretin and TonB N terminus short domain P40_19605 SM01004 Delta-aminolevulinic acid dehydratase P40_19620 SM00342 helix_turn_helix, arabinose operon control protein P40_19620 SM00871 Bacterial transcription activator, effector binding domain P40_19635 SM00357 Cold shock protein domain P40_19635 SM00382 ATPases associated with a variety of cellular activities P40_19635 SM00959 Rho termination factor, N-terminal domain P40_19680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P40_19680 SM00387 Histidine kinase-like ATPases P40_19680 SM00388 His Kinase A (phosphoacceptor) domain P40_19685 SM00448 cheY-homologous receiver domain P40_19685 SM00862 Transcriptional regulatory protein, C terminal P40_19715 SM00345 helix_turn_helix gluconate operon transcriptional repressor P40_19715 SM00895 P40_19715 P40_19725 SM00829 Enoylreductase P40_19755 SM00267 diguanylate cyclase P40_19760 SM00342 helix_turn_helix, arabinose operon control protein P40_19785 SM00965 Secretin and TonB N terminus short domain P40_19820 SM00422 helix_turn_helix, mercury resistance P40_19885 SM00342 helix_turn_helix, arabinose operon control protein P40_19900 SM00822 P40_19900 P40_19940 SM00382 ATPases associated with a variety of cellular activities P40_19975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). P40_19975 SM01049 P40_19975 P40_20000 SM00947 Carbonic anhydrase P40_20020 SM00421 helix_turn_helix, Lux Regulon P40_20025 SM00421 helix_turn_helix, Lux Regulon P40_20030 SM00421 helix_turn_helix, Lux Regulon P40_20060 SM00822 P40_20060 P40_20080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) P40_20080 SM00091 PAS domain P40_20080 SM00387 Histidine kinase-like ATPases P40_20080 SM00388 His Kinase A (phosphoacceptor) domain P40_20085 SM00421 helix_turn_helix, Lux Regulon P40_20085 SM00448 cheY-homologous receiver domain P40_20125 SM00382 ATPases associated with a variety of cellular activities P40_20160 SM00855 Phosphoglycerate mutase family P40_20180 SM00387 Histidine kinase-like ATPases P40_20180 SM00388 His Kinase A (phosphoacceptor) domain P40_20185 SM00448 cheY-homologous receiver domain P40_20185 SM00862 Transcriptional regulatory protein, C terminal P40_20230 SM00849 Metallo-beta-lactamase superfamily P40_20250 SM00822 P40_20250 P40_20330 SM00855 Phosphoglycerate mutase family P40_20345 SM00938 Nitrogen regulatory protein P-II P40_20355 SM00849 Metallo-beta-lactamase superfamily P40_20365 SM00382 ATPases associated with a variety of cellular activities P40_20375 SM00342 helix_turn_helix, arabinose operon control protein P40_20380 SM00822 P40_20380 P40_20385 SM00342 helix_turn_helix, arabinose operon control protein P40_20405 SM00387 Histidine kinase-like ATPases P40_20405 SM01080 P40_20405 P40_20415 SM00448 cheY-homologous receiver domain P40_20415 SM00862 Transcriptional regulatory protein, C terminal P40_20490 SM00421 helix_turn_helix, Lux Regulon P40_20505 SM00822 P40_20505 P40_20565 SM00344 helix_turn_helix ASNC type P40_20670 SM00867 YceI-like domain P40_20685 SM00822 P40_20685 P40_20705 SM00342 helix_turn_helix, arabinose operon control protein P40_20720 SM00342 helix_turn_helix, arabinose operon control protein P40_20730 SM00116 Domain in cystathionine beta-synthase and other proteins. P40_20745 SM00342 helix_turn_helix, arabinose operon control protein P40_20785 SM01060 P40_20785 P40_20810 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. P40_20835 SM00382 ATPases associated with a variety of cellular activities P40_20840 SM00710 Parallel beta-helix repeats P40_20840 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses P40_20850 SM00900 P40_20850 P40_20925 SM00342 helix_turn_helix, arabinose operon control protein P40_21010 SM00422 helix_turn_helix, mercury resistance P40_21015 SM00382 ATPases associated with a variety of cellular activities P40_21055 SM00327 von Willebrand factor (vWF) type A domain P40_21055 SM00609 Vault protein Inter-alpha-Trypsin domain P40_21075 SM00530 Helix-turn-helix XRE-family like proteins P40_21085 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs P40_21085 SM00474 3'-5' exonuclease P40_21085 SM00475 5'-3' exonuclease P40_21085 SM00482 DNA polymerase A domain P40_21110 SM00382 ATPases associated with a variety of cellular activities P40_21160 SM00342 helix_turn_helix, arabinose operon control protein P40_21195 SM00448 cheY-homologous receiver domain P40_21195 SM00862 Transcriptional regulatory protein, C terminal P40_21200 SM00091 PAS domain P40_21200 SM00387 Histidine kinase-like ATPases P40_21200 SM00388 His Kinase A (phosphoacceptor) domain P40_21225 SM01322 P40_21225 P40_21245 SM00226 Low molecular weight phosphatase family P40_21250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor P40_21260 SM00382 ATPases associated with a variety of cellular activities P40_21305 SM00052 Putative diguanylate phosphodiesterase P40_21305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) P40_21305 SM00091 PAS domain P40_21305 SM00267 diguanylate cyclase P40_21320 SM00382 ATPases associated with a variety of cellular activities P40_21330 SM00564 beta-propeller repeat P40_21365 SM00382 ATPases associated with a variety of cellular activities P40_21385 SM00822 P40_21385 P40_21390 SM00422 helix_turn_helix, mercury resistance P40_21420 SM00829 Enoylreductase P40_21435 SM00155 Phospholipase D. Active site motifs. P40_21495 SM00382 ATPases associated with a variety of cellular activities P40_21500 SM00382 ATPases associated with a variety of cellular activities P40_21520 SM00347 helix_turn_helix multiple antibiotic resistance protein P40_21540 SM00382 ATPases associated with a variety of cellular activities P40_21580 SM00470 ParB-like nuclease domain P40_21595 SM01228 P40_21595 P40_21600 SM01091 Transporter associated domain P40_21635 SM00357 Cold shock protein domain P40_21645 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase